{"text_format":"3","workbook":"xlsx","n_sheets":9,"sheets":["Slide lists","Normalized_Data","Diff Genes Number","Differential Data","Diff Data(UP)","Diff Data(Down)","Raw_Data","ReadMe","Sheet1"],"cells_cut":22,"read":"whole","date_system":"1900"}

{"sheet":"Slide lists","index":0,"n_rows":8,"n_cols":5,"rows_kept":8}
[]
[null,"Sample","Sample_Label","Chip_Barcode","Chip_Label"]
[null,"G415-1_(PrimeView).CEL","NC","",""]
[null,"G415-3_(PrimeView).CEL","NC","",""]
[null,"G415-2_(PrimeView).CEL","NC","",""]
[null,"G416-1_(PrimeView).CEL","KD","",""]
[null,"G416-2_(PrimeView).CEL","KD","",""]
[null,"G416-3_(PrimeView).CEL","KD","",""]

{"sheet":"Normalized_Data","index":1,"n_rows":49397,"n_cols":19,"rows_kept":4500,"cut":true,"merged":[[0,1,0,3],[0,4,0,6],[0,7,0,8],[0,9,0,12],[0,13,0,18]],"bounds":{"rows_first":2000,"rows_last":500,"rows_between":2000,"halvings":0}}
["Probe","KD","KD","KD","NC","NC","NC","P-value","P-value","Fold change","Fold change","Fold change","Fold change","Annotation","Annotation","Annotation","Annotation","Annotation","Annotation"]
["probeSet","G416-1_(PrimeView).CEL","G416-2_(PrimeView).CEL","G416-3_(PrimeView).CEL","G415-1_(PrimeView).CEL","G415-2_(PrimeView).CEL","G415-3_(PrimeView).CEL","Corrected p-value","P-value","Fold change","Log Fold change","Absolute Fold change","Regulation","Gene Symbol","Entrez Gene","Gene Ontology Biological Process","Gene Ontology Cellular Component","Gene Ontology Molecular Function","Alignments"]
["11764191_at",-0.16778564,-0.15454245,-0.015487194,0.015487194,0.07174778,0.039360046,0.22754177,0.039403223,-1.1132699,-0.15480343,1.1132699,"down","","","","","","chr17:62342072-62343073 (+) // 99.8 // q23.3"]
["11727050_a_at",-0.09128332,-0.2341342,-0.19493723,0.45874977,0.091282845,0.23790836,0.15909134,0.019224945,-1.3529407,-0.43609858,1.3529407,"down","PPP6C",5537,"0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0006470 // protein dephosphorylation // inferred from direct assay /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006470 // protein dephosphorylation // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // inferred from direct assay /// 0004722 // protein serine/threonine phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:127908852-127952218 (-) // 96.0 // q33.3"]
["11750344_a_at",-0.22893143,0.11978483,-0.005859375,-0.043834686,0.005859852,0.19174147,0.77943224,0.5120427,-1.0640684,-0.089590944,1.0640684,"down","ALOX15",246,"0006629 // lipid metabolic process // non-traceable author statement /// 0006691 // leukotriene metabolic process // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0019370 // leukotriene biosynthetic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005506 // iron ion binding // inferred from electronic annotation /// 0016165 // lipoxygenase activity // inferred from electronic annotation /// 0016165 // lipoxygenase activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050473 // arachidonate 15-lipoxygenase activity // inferred from electronic annotation","chr17:4534590-4545230 (-) // 97.77 // p13.2"]
["11759307_at",-0.023195267,-0.105296135,-0.08253479,0.3197565,0.123298645,0.023195267,0.29787663,0.06710658,-1.1693922,-0.22575891,1.1693922,"down","RREB1",6239,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0016604 // nuclear body // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:7108053-7252213 (+) // 95.0 // p24.3"]
["11761403_at",0.035476208,0.08372021,-0.24253416,-0.035476208,-0.12835455,0.29179955,0.8491131,0.6344239,-1.059783,-0.08376887,1.059783,"down","ISCU",23479,"0009399 // nitrogen fixation // traceable author statement /// 0016226 // iron-sulfur cluster assembly // traceable author statement /// 0016226 // iron-sulfur cluster assembly // inferred from electronic annotation","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay","0005506 // iron ion binding // traceable author statement /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0032947 // protein complex scaffold // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation","chr12:108956373-108961684 (+) // 80.72 // q23.3"]
["11757172_at",-0.13255787,0.00289917,0.0011692047,-0.2197094,-0.0011692047,0.1627245,0.94806445,0.85404164,-1.0163836,-0.02344507,1.0163836,"down","SNORA47",677828,"","","","chr5:76376258-76376396 (-) // 100.0 // q13.3"]
["11763268_at",-0.06217289,0.13184929,-0.034168243,0.06600618,0.034167767,-0.04654789,0.97700006,0.9346459,-1.0041949,-0.0060392395,1.0041949,"down","FAM120B",84498,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","","chr6:170599790-170716404 (+) // 88.48 // q27"]
["11727695_a_at",-0.44146872,0.19020987,0.02024746,-0.1888094,0.10753918,-0.02024746,0.9444053,0.8452407,-1.0303714,-0.04316449,1.0303714,"down","KLRC4-KLRK1 /// KLRK1","100528032 /// 22914","0002223 // stimulatory C-type lectin receptor signaling pathway // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0030101 // natural killer cell activation // inferred from electronic annotation /// 0030101 // natural killer cell activation // traceable author statement /// 0031295 // T cell costimulation // traceable author statement /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from electronic annotation /// 0045954 // positive regulation of natural killer cell mediated cytotoxicity // inferred from electronic annotation /// 0050776 // regulation of immune response // traceable author statement /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0032394 // MHC class Ib receptor activity // inferred from electronic annotation /// 0042288 // MHC class I protein binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr12:10524951-10542640 (-) // 54.21 // p13.2"]
["11730840_a_at",0.18354607,0.20202112,0.09928465,-0.099285126,-0.1415205,-0.29163122,0.09763451,0.0069413246,1.264964,0.3390963,1.264964,"up","ZMYND8",23613,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity","0001106 // RNA polymerase II transcription corepressor activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070491 // repressing transcription factor binding // inferred from sequence or structural similarity","chr20:45837858-45985474 (-) // 98.92 // q13.12"]
["11755175_a_at",0.08343315,0.062428474,0.09249115,-0.062428474,-0.1522007,-0.09961939,0.06261726,0.0025922146,1.1361871,0.18420039,1.1361871,"up","HSPA12A",259217,"0006950 // response to stress // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation","chr10:118430703-118609716 (-) // 94.89 // q25.3"]
["11731820_at",-0.022467613,-0.08208513,-0.09900522,0.022467613,0.07861996,0.16842747,0.2029982,0.03119994,-1.1155003,-0.15769094,1.1155003,"down","ADAM11",4185,"0006508 // proteolysis // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // traceable author statement /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from sequence or structural similarity","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0005178 // integrin binding // traceable author statement /// 0008237 // metallopeptidase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation","chr17:42836398-42859214 (+) // 96.66 // q21.31"]
["11731123_a_at",-0.1165843,-0.008701086,-0.14605522,0.008701324,0.05312705,0.18859673,0.2902378,0.063640505,-1.128121,-0.17392184,1.128121,"down","TMEM200A",114801,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:130758261-130764212 (+) // 93.26 // q23.1"]
["11761012_x_at",-0.23834419,0.026231289,-0.026231766,-0.10890341,0.07777548,0.09855509,0.69028324,0.3840683,-1.0732037,-0.10192391,1.0732037,"down","POM121L8P",29797,"","","","chr20:23969351-23971719 (+) // 91.03 // p11.21 /// chr22:21636713-21639084 (+) // 93.78 // q11.21 /// chr22:18833988-18836359 (+) // 93.41 // q11.21 /// chr22:24647516-24649886 (+) // 92.32 // q11.23 /// chr22:21043862-21046233 (+) // 91.36 // q11.21 /// chr22:21480010-21482381 (-) // 93.66 // q11.21 /// chr22:22984642-22987012 (-) // 92.36 // q11.22 /// chr22:25052816-25055186 (-) // 92.32 // q11.23"]
["11763593_a_at",0.043425083,-0.04079485,0.019208431,-0.15381289,-0.019208908,0.05052805,0.7718164,0.50020015,1.0339102,0.048110824,1.0339102,"up","RGNEF",64283,"0021955 // central nervous system neuron axonogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0060052 // neurofilament cytoskeleton organization // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:73181727-73237817 (+) // 99.22 // q13.2"]
["11730317_at",0.0037715435,0.055453777,-0.022717476,-0.23358154,-0.003771782,0.03066969,0.70219237,0.39954928,1.0577978,0.08106387,1.0577978,"up","RGS7BP",401190,"0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","","chr5:63801773-63908145 (+) // 89.65 // q12.3"]
["11743747_a_at",-0.28747368,-0.16032553,-0.09915924,0.47311687,0.09915924,0.121776104,0.21717292,0.035991043,-1.3320702,-0.41367015,1.3320702,"down","PHKA1",5255,"0005975 // carbohydrate metabolic process // traceable author statement /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005976 // polysaccharide metabolic process // inferred from electronic annotation /// 0005977 // glycogen metabolic process // traceable author statement /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0005980 // glycogen catabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006091 // generation of precursor metabolites and energy // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046777 // protein autophosphorylation // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005964 // phosphorylase kinase complex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds // inferred from electronic annotation /// 0004689 // phosphorylase kinase activity // inferred from electronic annotation /// 0004689 // phosphorylase kinase activity // traceable author statement /// 0005516 // calmodulin binding // inferred from electronic annotation","chrX:71798663-71934043 (-) // 98.84 // q13.1"]
["11716432_a_at",0.106515884,0.24729729,0.31036854,-0.34192467,-0.15204525,-0.106515884,0.12100262,0.010932983,1.3393712,0.42155585,1.3393712,"up","MNAT1",4331,"0000079 // regulation of cyclin-dependent protein kinase activity // traceable author statement /// 0000080 // G1 phase of mitotic cell cycle // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0000718 // nucleotide-excision repair, DNA damage removal // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006360 // transcription from RNA polymerase I promoter // traceable author statement /// 0006361 // transcription initiation from RNA polymerase I promoter // traceable author statement /// 0006362 // transcription elongation from RNA polymerase I promoter // traceable author statement /// 0006363 // termination of RNA polymerase I transcription // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006370 // 7-methylguanosine mRNA capping // traceable author statement /// 0006461 // protein complex assembly // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007512 // adult heart development // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0021591 // ventricular system development // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0044236 // multicellular organismal metabolic process // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050434 // positive regulation of viral transcription // traceable author statement /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005675 // holo TFIIH complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0004672 // protein kinase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008094 // DNA-dependent ATPase activity // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0008353 // RNA polymerase II carboxy-terminal domain kinase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction","chr14:61201458-61435480 (+) // 94.24 // q23.1"]
["11734196_a_at",0.028795242,0.058595657,-0.07202387,0.29309845,-0.0920949,-0.028795242,0.8807801,0.69867074,-1.0369027,-0.052280474,1.0369027,"down","SAMD4B",55095,"","","","chr19:39842454-39875535 (+) // 90.83 // q13.2"]
["11736790_x_at",0.017357826,-0.30050993,-0.13153839,-0.017357826,0.24562216,0.037229538,0.42471898,0.13632795,-1.170178,-0.22672807,1.170178,"down","FBXO4",26272,"0000209 // protein polyubiquitination // inferred from direct assay /// 0000723 // telomere maintenance // inferred from mutant phenotype /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0031146 // SCF-dependent proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0031398 // positive regulation of protein ubiquitination // inferred from direct assay","0000151 // ubiquitin ligase complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0019005 // SCF ubiquitin ligase complex // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction","chr5:41925355-41935423 (+) // 83.91 // p13.1"]
["11745745_a_at",-0.019871712,0.07048035,-0.054333687,0.019871712,-0.25058174,0.19146347,0.97687525,0.93380696,1.0082409,0.011840439,1.0082409,"up","SLC39A1",27173,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // traceable author statement /// 0006829 // zinc ion transport // inferred from electronic annotation /// 0030001 // metal ion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0071577 // zinc ion transmembrane transport // inferred from mutant phenotype /// 0071577 // zinc ion transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0005102 // receptor binding // inferred from electronic annotation /// 0005385 // zinc ion transmembrane transporter activity // inferred from electronic annotation /// 0022890 // inorganic cation transmembrane transporter activity // traceable author statement /// 0046873 // metal ion transmembrane transporter activity // inferred from electronic annotation","chr1:153931651-153940097 (-) // 92.53 // q21.3"]
["11716949_s_at",-0.24838543,0.021629333,0.09658432,-0.09293747,-0.021629333,0.07591343,0.92755127,0.8049389,-1.0213704,-0.03050617,1.0213704,"down","TM9SF3",56889,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005488 // binding // inferred from direct assay","chr10:98277867-98346797 (-) // 96.48 // q24.1"]
["11715860_a_at",0.06762791,0.11651707,-0.036488533,-0.009097099,-0.039016724,0.009097099,0.57798773,0.2582252,1.0440743,0.062224377,1.0440743,"up","RIC8A",60626,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0008542 // visual learning // inferred from electronic annotation /// 0009416 // response to light stimulus // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0001965 // G-protein alpha-subunit binding // inferred from electronic annotation /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // inferred from electronic annotation","chr11:207118-215113 (+) // 82.86 // p15.5"]
["11753470_a_at",0.0073308945,-0.19370842,-0.1417036,0.09638214,0.039736748,-0.0073308945,0.3381793,0.08638905,-1.1113318,-0.15228964,1.1113318,"down","TIA1",7072,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0017148 // negative regulation of translation // inferred from electronic annotation /// 0042036 // negative regulation of cytokine biosynthetic process // inferred from electronic annotation /// 0048024 // regulation of nuclear mRNA splicing, via spliceosome // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008143 // poly(A) RNA binding // traceable author statement /// 0017091 // AU-rich element binding // inferred from electronic annotation","chr2:70443805-70475586 (-) // 95.68 // p13.3"]
["11737412_at",-0.012422085,-0.020700455,0.060606003,0.012421846,0.105391264,-0.023920774,0.86112803,0.6579821,-1.015462,-0.02213631,1.015462,"down","SCML4",256380,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr6:108023360-108145521 (-) // 84.48 // q21"]
["11733237_a_at",-0.11774683,0.31658602,-0.27975368,-0.03243351,0.03243351,0.117218494,0.8985047,0.7367393,-1.0468425,-0.06604434,1.0468425,"down","RPGRIP1L",23322,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008589 // regulation of smoothened signaling pathway // inferred from electronic annotation /// 0021532 // neural tube patterning // inferred from electronic annotation /// 0021537 // telencephalon development // inferred from electronic annotation /// 0021549 // cerebellum development // inferred from electronic annotation /// 0021670 // lateral ventricle development // inferred from electronic annotation /// 0021772 // olfactory bulb development // inferred from electronic annotation /// 0022038 // corpus callosum development // inferred from electronic annotation /// 0035108 // limb morphogenesis // inferred from electronic annotation /// 0035115 // embryonic forelimb morphogenesis // inferred from electronic annotation /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from electronic annotation /// 0043010 // camera-type eye development // inferred from electronic annotation /// 0043584 // nose development // inferred from electronic annotation /// 0045744 // negative regulation of G-protein coupled receptor protein signaling pathway // inferred from direct assay /// 0060039 // pericardium development // inferred from electronic annotation /// 0060322 // head development // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0005923 // tight junction // inferred from electronic annotation /// 0005929 // cilium // inferred from direct assay /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from direct assay /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0035085 // cilium axoneme // inferred from direct assay /// 0035085 // cilium axoneme // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0031870 // thromboxane A2 receptor binding // inferred from physical interaction","chr16:53633817-53737742 (-) // 96.81 // q12.2"]
["11732837_a_at",-0.23874092,-0.38365078,-0.08135319,0.1232481,0.08135319,0.23099375,0.15382542,0.017919049,-1.3011434,-0.37977996,1.3011434,"down","IL37",27178,"0001960 // negative regulation of cytokine-mediated signaling pathway // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0005149 // interleukin-1 receptor binding // non-traceable author statement /// 0005149 // interleukin-1 receptor binding // traceable author statement /// 0005152 // interleukin-1 receptor antagonist activity // inferred from electronic annotation","chr2:113670547-113676459 (+) // 95.9 // q13"]
["11747580_a_at",-0.02142477,0.05493641,0.02000904,-0.016217709,-0.19804955,0.016218185,0.6184263,0.29846472,1.0598475,0.08385666,1.0598475,"up","PGS1",9489,"0006655 // phosphatidylglycerol biosynthetic process // inferred from sequence or structural similarity /// 0006655 // phosphatidylglycerol biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0032049 // cardiolipin biosynthetic process // inferred from sequence or structural similarity /// 0046339 // diacylglycerol metabolic process // inferred from sequence or structural similarity","0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0008444 // CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity // inferred from sequence or structural similarity /// 0008444 // CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016780 // phosphotransferase activity, for other substituted phosphate groups // inferred from electronic annotation","chr17:76374731-76420637 (+) // 98.17 // q25.3"]
["11744584_a_at",0.21076012,0.11268902,-0.025663376,0.025663376,-0.116360664,-0.08253002,0.40550637,0.12412137,1.1149696,0.15700439,1.1149696,"up","HYI",81888,"","","0008903 // hydroxypyruvate isomerase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation","chr1:43916277-43919346 (-) // 92.28 // p34.2"]
["11720005_at",-0.03165841,-0.026622295,0.1168735,-0.32676625,0.026622295,0.22602773,0.92808086,0.8062189,1.0311372,0.044236343,1.0311372,"up","NPTX2",4885,"0007268 // synaptic transmission // non-traceable author statement","0005576 // extracellular region // inferred from electronic annotation","0030246 // carbohydrate binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:98246596-98259181 (+) // 94.95 // q22.1"]
["11731753_a_at",0.32802272,0.046065092,-0.04606533,-0.27516842,-0.05342841,0.14276958,0.6698803,0.3579556,1.1260597,0.17128325,1.1260597,"up","ZNF577",84765,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:52374552-52391229 (-) // 79.47 // q13.41"]
["11758622_s_at",0.0128479,0.11434746,0.1259718,-0.21044922,-0.12011719,-0.0128479,0.23549823,0.042084076,1.1477914,0.19886045,1.1477914,"up","MXRA7",439921,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr17:74675651-74676010 (-) // 99.72 // q25.1 /// chr2:162196027-162196386 (-) // 99.16 // q24.2"]
["11762600_a_at",-0.0041327477,-0.02305746,0.02305746,0.34783268,-0.12950468,0.0041327477,0.843567,0.62484926,-1.053749,-0.075531214,1.053749,"down","SEC31B",25956,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0012507 // ER to Golgi transport vesicle membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0003954 // NADH dehydrogenase activity // inferred from electronic annotation /// 0008137 // NADH dehydrogenase (ubiquinone) activity // inferred from electronic annotation","chr10:102265384-102289628 (-) // 99.9 // q24.31"]
["11736940_at",-0.119010925,-0.074701786,0.136477,-0.16495991,0.074701786,0.2256813,0.86493516,0.66671425,-1.0455192,-0.0642196,1.0455192,"down","CHRNB4",1143,"0001508 // regulation of action potential // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006939 // smooth muscle contraction // inferred from electronic annotation /// 0006940 // regulation of smooth muscle contraction // inferred from electronic annotation /// 0007165 // signal transduction // inferred from direct assay /// 0007268 // synaptic transmission // traceable author statement /// 0007271 // synaptic transmission, cholinergic // traceable author statement /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0035094 // response to nicotine // inferred from electronic annotation /// 0035095 // behavioral response to nicotine // inferred from electronic annotation /// 0042391 // regulation of membrane potential // inferred from electronic annotation /// 0046928 // regulation of neurotransmitter secretion // non-traceable author statement /// 0060084 // synaptic transmission involved in micturition // inferred from mutant phenotype /// 0060084 // synaptic transmission involved in micturition // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred by curator /// 0005892 // acetylcholine-gated channel complex // inferred from direct assay /// 0005892 // acetylcholine-gated channel complex // traceable author statement /// 0005892 // acetylcholine-gated channel complex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004889 // acetylcholine-activated cation-selective channel activity // traceable author statement /// 0004889 // acetylcholine-activated cation-selective channel activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0015276 // ligand-gated ion channel activity // traceable author statement /// 0015464 // acetylcholine receptor activity // inferred from direct assay /// 0042166 // acetylcholine binding // inferred from electronic annotation","chr15:78916514-78933587 (-) // 73.27 // q25.1"]
["11741412_at",0.13311052,-0.0012841225,0.0012841225,-0.086010695,0.064998865,-0.10898757,0.6005887,0.2804571,1.0626771,0.087703355,1.0626771,"up","LHX9",56956,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from sequence or structural similarity /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0008585 // female gonad development // inferred from electronic annotation /// 0035262 // gonad morphogenesis // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from sequence or structural similarity /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:197886516-197899273 (+) // 97.89 // q31.3"]
["11753606_x_at",0.09254551,0.07559395,0.060235023,-0.060235023,-0.16126919,-0.08808136,0.08115887,0.0047258455,1.1323501,0.17932007,1.1323501,"up","CDC42",998,"0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0003334 // keratinocyte development // inferred from electronic annotation /// 0006184 // GTP catabolic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0007030 // Golgi organization // inferred from sequence or structural similarity /// 0007088 // regulation of mitosis // inferred from electronic annotation /// 0007097 // nuclear migration // inferred from electronic annotation /// 0007163 // establishment or maintenance of cell polarity // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030225 // macrophage differentiation // traceable author statement /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0031274 // positive regulation of pseudopodium assembly // inferred from direct assay /// 0031295 // T cell costimulation // traceable author statement /// 0031333 // negative regulation of protein complex assembly // inferred from physical interaction /// 0031424 // keratinization // inferred from electronic annotation /// 0031647 // regulation of protein stability // inferred from electronic annotation /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from electronic annotation /// 0034332 // adherens junction organization // inferred from electronic annotation /// 0034613 // cellular protein localization // inferred from electronic annotation /// 0035088 // establishment or maintenance of apical/basal cell polarity // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0042176 // regulation of protein catabolic process // inferred from electronic annotation /// 0042692 // muscle cell differentiation // traceable author statement /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0043497 // regulation of protein heterodimerization activity // inferred from electronic annotation /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0045859 // regulation of protein kinase activity // inferred from electronic annotation /// 0046330 // positive regulation of JNK cascade // inferred from electronic annotation /// 0046847 // filopodium assembly // inferred from electronic annotation /// 0048664 // neuron fate determination // inferred from electronic annotation /// 0048730 // epidermis morphogenesis // inferred from electronic annotation /// 0051017 // actin filament bundle assembly // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051149 // positive regulation of muscle cell differentiation // traceable author statement /// 0051246 // regulation of protein metabolic process // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051489 // regulation of filopodium assembly // inferred from direct assay /// 0051647 // nucleus localization // inferred from electronic annotation /// 0051683 // establishment of Golgi localization // inferred from sequence or structural similarity /// 0051988 // regulation of attachment of spindle microtubules to kinetochore // inferred from mutant phenotype /// 0060070 // canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0060684 // epithelial-mesenchymal cell signaling // inferred from electronic annotation /// 0060789 // hair follicle placode formation // inferred from electronic annotation /// 0071338 // positive regulation of hair follicle cell proliferation // inferred from electronic annotation /// 0071777 // positive regulation of cell cycle cytokinesis // inferred from mutant phenotype /// 0072384 // organelle transport along microtubule // inferred from sequence or structural similarity /// 0090136 // epithelial cell-cell adhesion // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0000139 // Golgi membrane // inferred from sequence or structural similarity /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030141 // secretory granule // inferred from electronic annotation /// 0030175 // filopodium // inferred from direct assay /// 0030496 // midbody // inferred from direct assay /// 0030496 // midbody // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from direct assay /// 0043025 // neuronal cell body // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation /// 0051233 // spindle midzone // inferred from direct assay /// 0071944 // cell periphery // inferred from electronic annotation /// 0072686 // mitotic spindle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from direct assay /// 0019901 // protein kinase binding // inferred from physical interaction /// 0030742 // GTP-dependent protein binding // inferred from electronic annotation /// 0031435 // mitogen-activated protein kinase kinase kinase binding // inferred from electronic annotation /// 0031996 // thioesterase binding // inferred from physical interaction","chr1:22404971-22418010 (+) // 100.0 // p36.12 /// chr4:22728997-22729573 (-) // 98.96 // p15.2"]
["11761646_at",-0.56841135,0.11733961,-0.0033092499,-0.46233797,0.016433716,0.0033092499,0.99573547,0.988821,-1.0027268,-0.0039285775,1.0027268,"down","SRGAP3",9901,"0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005096 // GTPase activator activity // inferred from electronic annotation","chr3:9048662-9166601 (-) // 80.34 // p25.3"]
["11718707_a_at",0.25784302,0.26251125,0.08749008,-0.08749008,-0.3733492,-0.316679,0.124172926,0.011576401,1.3772472,0.46178755,1.3772472,"up","IGF1R",3480,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0006955 // immune response // inferred from mutant phenotype /// 0007165 // signal transduction // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0014065 // phosphatidylinositol 3-kinase cascade // inferred by curator /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030010 // establishment of cell polarity // inferred from electronic annotation /// 0030238 // male sex determination // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0030879 // mammary gland development // inferred from electronic annotation /// 0031017 // exocrine pancreas development // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0032467 // positive regulation of cytokinesis // inferred from electronic annotation /// 0033197 // response to vitamin E // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043409 // negative regulation of MAPK cascade // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from mutant phenotype /// 0045768 // positive regulation of anti-apoptosis // inferred from electronic annotation /// 0046328 // regulation of JNK cascade // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048009 // insulin-like growth factor receptor signaling pathway // inferred from direct assay /// 0048009 // insulin-like growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // inferred from direct assay /// 0051054 // positive regulation of DNA metabolic process // inferred from electronic annotation /// 0051262 // protein tetramerization // inferred from direct assay /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0051389 // inactivation of MAPKK activity // inferred from direct assay /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0051898 // negative regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0060740 // prostate gland epithelium morphogenesis // inferred from electronic annotation /// 0090031 // positive regulation of steroid hormone biosynthetic process // inferred from electronic annotation","0005792 // microsome // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred by curator /// 0005901 // caveola // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005010 // insulin-like growth factor-activated receptor activity // inferred from direct assay /// 0005010 // insulin-like growth factor-activated receptor activity // traceable author statement /// 0005158 // insulin receptor binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005520 // insulin-like growth factor binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0031994 // insulin-like growth factor I binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from physical interaction /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation /// 0043559 // insulin binding // inferred from physical interaction /// 0043560 // insulin receptor substrate binding // inferred from physical interaction /// 0043560 // insulin receptor substrate binding // inferred from electronic annotation","chr15:99192272-99507759 (+) // 97.28 // q26.3"]
["11722086_x_at",0.11649895,-0.15109825,-0.013118267,0.025090218,0.013118267,-0.10430956,0.98191935,0.94758844,1.0042565,0.0061277803,1.0042565,"up","SEPT1",1731,"0007049 // cell cycle // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0031105 // septin complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation","chr16:30389455-30394171 (-) // 96.24 // p11.2"]
["11742820_s_at",-0.035295486,0.035295725,0.32529497,-0.20373774,-0.050317764,0.051692247,0.5763126,0.25649673,1.1296581,0.1758862,1.1296581,"up","OGN",4969,"0048662 // negative regulation of smooth muscle cell proliferation // inferred from sequence or structural similarity","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation","chr9:95146099-95166937 (-) // 99.63 // q22.31"]
["11740952_at",0.06632328,0.078614235,0.11297655,-0.18593168,-0.06632328,-0.24046898,0.11241219,0.0093404995,1.1893824,0.25021267,1.1893824,"up","OTUD7A",161725,"0006508 // proteolysis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:31775328-31947542 (-) // 88.66 // q13.3"]
["11746041_a_at",0.0068387985,-0.0068387985,-0.011749268,0.23205185,0.060178757,-0.025759697,0.6093485,0.28934646,-1.0663936,-0.092740044,1.0663936,"down","TRA2B",6434,"0000375 // RNA splicing, via transesterification reactions // traceable author statement /// 0000381 // regulation of alternative nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0048026 // positive regulation of nuclear mRNA splicing, via spliceosome // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr3:185634536-185655818 (-) // 94.9 // q27.2"]
["11762973_at",-0.06075287,0.08971238,-0.14635372,-0.15811849,0.06075287,0.09909582,0.8937594,0.7263164,-1.0279058,-0.03970809,1.0279058,"down","","","","0005576 // extracellular region // inferred from electronic annotation","","chr2:31393687-31394575 (-) // 65.65 // p23.1"]
["11744564_a_at",0.011217117,0.1774416,0.16684437,-0.15569782,-0.05418873,-0.011217117,0.25426522,0.04895358,1.1425064,0.1922022,1.1425064,"up","PPWD1",23398,"0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006457 // protein folding // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation","chr5:64859125-64883376 (+) // 99.43 // q12.3"]
["11759054_at",-0.004957676,0.004957676,-0.122697115,-0.045288086,0.11995411,0.18607378,0.4930906,0.18575686,-1.0926355,-0.12781222,1.0926355,"down","DEFB126",81623,"0006952 // defense response // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0030112 // glycocalyx // inferred from electronic annotation","","chr20:123009-126392 (+) // 91.23 // p13"]
["11720104_a_at",0.3259282,0.15366888,0.02959919,-0.1468935,-0.02959919,-0.06719017,0.26584265,0.053556032,1.1899985,0.25095975,1.1899985,"up","PAK1",5058,"0000165 // MAPK cascade // inferred from direct assay /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016358 // dendrite development // inferred from electronic annotation /// 0031295 // T cell costimulation // traceable author statement /// 0031532 // actin cytoskeleton reorganization // inferred from direct assay /// 0031532 // actin cytoskeleton reorganization // inferred from mutant phenotype /// 0031532 // actin cytoskeleton reorganization // non-traceable author statement /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0032956 // regulation of actin cytoskeleton organization // inferred from electronic annotation /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0033148 // positive regulation of intracellular estrogen receptor signaling pathway // inferred from direct assay /// 0033554 // cellular response to stress // inferred from electronic annotation /// 0042060 // wound healing // inferred from mutant phenotype /// 0043507 // positive regulation of JUN kinase activity // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from mutant phenotype /// 0048812 // neuron projection morphogenesis // inferred from sequence or structural similarity /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051496 // positive regulation of stress fiber assembly // inferred from mutant phenotype /// 0060244 // negative regulation of cell proliferation involved in contact inhibition // inferred from mutant phenotype","0001726 // ruffle // inferred from direct assay /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0014704 // intercalated disc // inferred from sequence or structural similarity /// 0014704 // intercalated disc // inferred from electronic annotation /// 0030018 // Z disc // inferred from sequence or structural similarity /// 0030018 // Z disc // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030424 // axon // inferred from sequence or structural similarity /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0031941 // filamentous actin // non-traceable author statement /// 0031965 // nuclear membrane // inferred from sequence or structural similarity /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation","chr11:77032591-77185365 (-) // 85.0 // q13.5"]
["11731540_at",0.09851956,-0.05185318,-0.26145554,-0.07010317,0.05185342,0.2168448,0.6714371,0.36015102,-1.1002221,-0.1377948,1.1002221,"down","SESTD1",91404,"0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from mutant phenotype","0034704 // calcium channel complex // inferred from physical interaction","0001786 // phosphatidylserine binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005545 // 1-phosphatidylinositol binding // inferred from direct assay /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from direct assay /// 0010314 // phosphatidylinositol-5-phosphate binding // inferred from direct assay /// 0031210 // phosphatidylcholine binding // inferred from direct assay /// 0032266 // phosphatidylinositol-3-phosphate binding // inferred from direct assay /// 0043325 // phosphatidylinositol-3,4-bisphosphate binding // inferred from direct assay /// 0070273 // phosphatidylinositol-4-phosphate binding // inferred from direct assay /// 0070300 // phosphatidic acid binding // inferred from direct assay /// 0080025 // phosphatidylinositol-3,5-bisphosphate binding // inferred from direct assay","chr2:179966420-180129517 (-) // 86.67 // q31.2"]
["11725347_a_at",0.1429596,0.048283577,-0.03065586,0.03065586,-0.20164871,-0.26503277,0.40760902,0.12554821,1.1477997,0.19887094,1.1477997,"up","TFDP1",7027,"0000080 // G1 phase of mitotic cell cycle // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003713 // transcription coactivator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction","chr13:114238987-114295788 (+) // 90.18 // q34"]
["11755375_a_at",-0.037140846,0.049865246,0.07652426,-0.24228764,0.037140846,-0.12989616,0.4906287,0.18382046,1.1029983,0.14143051,1.1029983,"up","DGKH",160851,"0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from mutant phenotype /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0051259 // protein oligomerization // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004143 // diacylglycerol kinase activity // inferred from mutant phenotype /// 0004143 // diacylglycerol kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr13:42729424-42803386 (+) // 96.93 // q14.11"]
["11727314_a_at",0.13841343,0.11132622,0.14607716,-0.24202728,-0.12889194,-0.11132622,0.05885244,0.0022872312,1.2249199,0.29268742,1.2249199,"up","ABCC5",10057,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015711 // organic anion transport // traceable author statement /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // inferred from direct assay /// 0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // traceable author statement /// 0008514 // organic anion transmembrane transporter activity // traceable author statement /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation","chr3:183637721-183735803 (-) // 99.16 // q27.1"]
["11745576_at",-0.08589697,-0.02443266,0.09611893,0.02443266,-0.13182974,0.13709831,0.95929456,0.884454,-1.0101974,-0.014637235,1.0101974,"down","KIRREL3-AS3",283165,"","","","chr11:126872804-126875953 (+) // 93.56 // q24.2"]
["11739591_s_at",-0.2174778,-0.19998074,-0.1552,0.31595325,0.1552,0.20205116,0.04476294,0.0012569329,-1.3335645,-0.4152876,1.3335645,"down","MINA",84864,"0042254 // ribosome biogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay","","chr3:97660660-97691295 (-) // 99.04 // q11.2"]
["11718486_a_at",-0.15843105,-0.061515808,-0.08907223,0.20312977,0.101592064,0.061515808,0.124318354,0.011618413,-1.1688466,-0.2250856,1.1688466,"down","EI24",9538,"0006914 // autophagy // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","","chr11:125439111-125454579 (+) // 93.48 // q24.2"]
["11736828_x_at",-0.08479977,-0.020839691,-0.10571003,0.12805271,0.12683678,0.020839691,0.1650628,0.020643832,-1.119116,-0.16235952,1.119116,"down","ST3GAL1",6482,"0006464 // cellular protein modification process // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0016266 // O-glycan processing // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030173 // integral to Golgi membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0003836 // beta-galactoside (CMP) alpha-2,3-sialyltransferase activity // inferred from electronic annotation /// 0003836 // beta-galactoside (CMP) alpha-2,3-sialyltransferase activity // traceable author statement /// 0008373 // sialyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr8:134467090-134584183 (-) // 90.59 // q24.22"]
["11717923_s_at",0.23632145,-0.0117378235,-0.05424118,0.025021553,0.0117378235,-0.10081959,0.7538321,0.47415948,1.0556519,0.07813419,1.0556519,"up","YAP1",10413,"0001570 // vasculogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0008283 // cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010837 // regulation of keratinocyte proliferation // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from electronic annotation /// 0030857 // negative regulation of epithelial cell differentiation // inferred from electronic annotation /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0035329 // hippo signaling cascade // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0046622 // positive regulation of organ growth // inferred from electronic annotation /// 0060242 // contact inhibition // inferred from direct assay /// 0071480 // cellular response to gamma radiation // inferred from direct assay /// 0072091 // regulation of stem cell proliferation // inferred from electronic annotation /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0001076 // RNA polymerase II transcription factor binding transcription factor activity // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0070064 // proline-rich region binding // inferred from electronic annotation","chr11:101981209-102104149 (+) // 91.79 // q22.1"]
["11724546_at",-0.061279774,-0.21429181,-0.00860405,0.00860405,0.3738408,0.35647774,0.2902378,0.06364138,-1.266663,-0.34103268,1.266663,"down","HCFC2",29915,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0016032 // viral reproduction // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003713 // transcription coactivator activity // traceable author statement","chr12:104458234-104500299 (+) // 97.11 // q23.3"]
["11730716_a_at",-0.47048163,0.20570302,0.15663505,-0.45436692,-0.0984962,0.0984962,0.8779176,0.69234985,1.0832812,0.115407735,1.0832812,"up","PAGE5",90737,"","","","chrX:55246788-55250533 (+) // 87.59 // p11.21"]
["11730612_a_at",0.53455734,0.42259598,0.05638981,-0.05638981,-0.23690033,-0.14053774,0.21367058,0.03476027,1.397121,0.48245692,1.397121,"up","MBOAT7",79143,"0006644 // phospholipid metabolic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation","chr19:54681993-54693733 (-) // 82.66 // q13.42"]
["11718387_s_at",-0.10873985,-0.03442669,-0.030312538,0.16691208,0.14325428,0.030312538,0.18313743,0.025389718,-1.1260878,-0.17131929,1.1260878,"down","ZFYVE20",64145,"0006810 // transport // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016197 // endosomal transport // non-traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005768 // endosome // non-traceable author statement /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:15111579-15140664 (-) // 84.74 // p25.1"]
["11715842_a_at",0.16835022,0.17328262,0.18944454,-0.16835022,-0.23680878,-0.18947506,0.0153656,6.005666e-5,1.2970527,0.37523714,1.2970527,"up","MAPK1",5594,"0000165 // MAPK cascade // traceable author statement /// 0000165 // MAPK cascade // inferred from electronic annotation /// 0000186 // activation of MAPKK activity // traceable author statement /// 0000187 // activation of MAPK activity // traceable author statement /// 0000189 // MAPK import into nucleus // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0006935 // chemotaxis // traceable author statement /// 0006950 // response to stress // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009636 // response to toxin // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010800 // positive regulation of peptidyl-threonine phosphorylation // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0019233 // sensory perception of pain // inferred from electronic annotation /// 0019858 // cytosine metabolic process // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032872 // regulation of stress-activated MAPK cascade // traceable author statement /// 0033598 // mammary gland epithelial cell proliferation // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0042221 // response to chemical stimulus // inferred from electronic annotation /// 0043330 // response to exogenous dsRNA // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050852 // T cell receptor signaling pathway // inferred from electronic annotation /// 0050853 // B cell receptor signaling pathway // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0051493 // regulation of cytoskeleton organization // traceable author statement /// 0060397 // JAK-STAT cascade involved in growth hormone signaling pathway // traceable author statement /// 0060716 // labyrinthine layer blood vessel development // inferred from electronic annotation /// 0070371 // ERK1 and ERK2 cascade // inferred from direct assay /// 0070371 // ERK1 and ERK2 cascade // traceable author statement /// 0072584 // caveolin-mediated endocytosis // traceable author statement /// 0090170 // regulation of Golgi inheritance // traceable author statement /// 2000641 // regulation of early endosome to late endosome transport // traceable author statement","0005625 // soluble fraction // inferred from electronic annotation /// 0005626 // insoluble fraction // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005769 // early endosome // traceable author statement /// 0005770 // late endosome // traceable author statement /// 0005794 // Golgi apparatus // traceable author statement /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005901 // caveola // traceable author statement /// 0005925 // focal adhesion // traceable author statement /// 0031143 // pseudopodium // inferred from electronic annotation /// 0032839 // dendrite cytoplasm // inferred from electronic annotation /// 0033267 // axon part // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0001784 // phosphotyrosine binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004707 // MAP kinase activity // inferred from electronic annotation /// 0004707 // MAP kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008353 // RNA polymerase II carboxy-terminal domain kinase activity // inferred from sequence or structural similarity /// 0008353 // RNA polymerase II carboxy-terminal domain kinase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019902 // phosphatase binding // inferred from physical interaction /// 0031435 // mitogen-activated protein kinase kinase kinase binding // inferred from electronic annotation","chr22:22108791-22221970 (-) // 87.22 // q11.21"]
["11722863_at",0.05846739,-0.09055114,0.09760165,-0.2209351,-0.05846739,0.16244912,0.85793716,0.6520478,1.0430611,0.06082372,1.0430611,"up","SCGB2A1",4246,"","","0005496 // steroid binding // inferred from electronic annotation /// 0005497 // androgen binding // non-traceable author statement","chr11:61976144-61981415 (+) // 94.72 // q12.3"]
["11751154_x_at",0.09265137,0.07163811,-0.015445709,0.015445709,-0.107004166,-0.027407646,0.43219146,0.14137766,1.0638317,0.089269914,1.0638317,"up","ALDOC",230,"0001666 // response to hypoxia // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006000 // fructose metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006096 // glycolysis // inferred from electronic annotation /// 0006096 // glycolysis // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0010243 // response to organic nitrogen // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0030388 // fructose 1,6-bisphosphate metabolic process // inferred from direct assay /// 0031100 // organ regeneration // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0051289 // protein homotetramerization // inferred from electronic annotation /// 0051290 // protein heterotetramerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred by curator /// 0030424 // axon // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004332 // fructose-bisphosphate aldolase activity // inferred from direct assay /// 0004332 // fructose-bisphosphate aldolase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from direct assay /// 0016829 // lyase activity // inferred from electronic annotation","chr17:26900134-26903912 (-) // 99.42 // q11.2"]
["11726904_a_at",0.13721752,-0.021623611,0.021623611,0.1657362,-0.046319008,-0.06026268,0.9170195,0.7801217,1.0182,0.026021026,1.0182,"up","COBL",23242,"0001843 // neural tube closure // inferred from electronic annotation","","0003779 // actin binding // inferred from electronic annotation","chr7:51083909-51384515 (-) // 99.51 // p12.1"]
["11753940_a_at",-0.104159355,-0.01706314,0.0052227974,-0.0052227974,0.2806816,0.24943352,0.3481074,0.09123641,-1.1596028,-0.21363068,1.1596028,"down","NRL",4901,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007468 // regulation of rhodopsin gene expression // traceable author statement /// 0007468 // regulation of rhodopsin gene expression // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0007601 // visual perception // traceable author statement /// 0045872 // positive regulation of rhodopsin gene expression // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046548 // retinal rod cell development // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043522 // leucine zipper domain binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr14:24549316-24584223 (-) // 91.15 // q11.2"]
["11751357_a_at",-0.087032795,-0.093695164,-0.13967466,0.35864115,0.087032795,0.23416281,0.13708603,0.014190119,-1.2599907,-0.33341306,1.2599907,"down","MEI1",150365,"0007126 // meiosis // inferred from electronic annotation /// 0007141 // male meiosis I // inferred from electronic annotation /// 0007276 // gamete generation // inferred from electronic annotation /// 0007286 // spermatid development // inferred from electronic annotation","","","chr22:42148507-42177849 (+) // 98.98 // q13.2"]
["11727430_s_at",-0.44819164,-0.09070516,-0.027568817,0.16605067,0.027568817,0.048240423,0.4024001,0.1223669,-1.2053415,-0.2694419,1.2053415,"down","C6orf162",57150,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:88046724-88052041 (+) // 91.8 // q15"]
["11721103_a_at",-0.15729094,0.043723106,-0.24828339,0.10121822,-0.043723106,0.19780207,0.4272679,0.13802625,-1.1532587,-0.20571615,1.1532587,"down","POLDIP3",84271,"0006417 // regulation of translation // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0035145 // exon-exon junction complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr22:42979727-43010962 (-) // 99.49 // q13.2"]
["11755049_a_at",0.009366989,0.04752159,0.08543205,-0.009366989,-0.094120026,-0.055038452,0.22301404,0.03807563,1.071983,0.100282,1.071983,"up","PIK3C3",5289,"0000045 // autophagic vacuole assembly // inferred from electronic annotation /// 0000910 // cytokinesis // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0007032 // endosome organization // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0036092 // phosphatidylinositol-3-phosphate biosynthetic process // inferred from mutant phenotype /// 0036092 // phosphatidylinositol-3-phosphate biosynthetic process // traceable author statement /// 0036092 // phosphatidylinositol-3-phosphate biosynthetic process // inferred from electronic annotation /// 0043201 // response to leucine // inferred from electronic annotation /// 0045022 // early endosome to late endosome transport // inferred from mutant phenotype /// 0045087 // innate immune response // traceable author statement /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation /// 0048015 // phosphatidylinositol-mediated signaling // inferred from electronic annotation /// 0050708 // regulation of protein secretion // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0005770 // late endosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0030496 // midbody // inferred from direct assay /// 0030496 // midbody // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016303 // 1-phosphatidylinositol-3-kinase activity // inferred from mutant phenotype /// 0016303 // 1-phosphatidylinositol-3-kinase activity // inferred from electronic annotation /// 0016303 // 1-phosphatidylinositol-3-kinase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0035004 // phosphatidylinositol 3-kinase activity // inferred from electronic annotation","chr18:39605275-39661443 (+) // 79.99 // q12.3"]
["11764109_at",-0.002151966,0.435853,-0.067097425,-0.075879335,0.38459015,0.002151966,0.97699255,0.9345506,1.0129621,0.0185802,1.0129621,"up","","","","","","chr6:163789337-163789753 (-) // 99.52 // q26"]
["11749470_a_at",-0.41451597,0.15260172,-0.042295933,-0.16900635,0.042295933,0.22202778,0.7983471,0.5440462,-1.0967052,-0.13317578,1.0967052,"down","TRPM8",79054,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0009266 // response to temperature stimulus // inferred from electronic annotation /// 0009409 // response to cold // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050955 // thermoception // inferred from electronic annotation /// 0051289 // protein homotetramerization // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070207 // protein homotrimerization // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr2:234826049-234925973 (+) // 96.93 // q37.1"]
["11750933_a_at",0.13175917,-0.29403162,-0.25020266,0.6821618,-0.09202051,0.09202051,0.5671142,0.24769954,-1.2877736,-0.36487898,1.2877736,"down","ZNF480",147657,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:52800431-52826411 (+) // 95.51 // q13.41"]
["11746026_x_at",0.31429148,0.016879559,-0.13104248,-0.041956425,0.010965347,-0.010965347,0.81551456,0.5735909,1.0575274,0.08069507,1.0575274,"up",-0.13104248,"MILR1",284021,"0033004 // negative regulation of mast cell activation // inferred from sequence or structural similarity /// 0043303 // mast cell degranulation // inferred from sequence or structural similarity","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from sequence or structural similarity"]
["11723087_at",-0.27253962,-0.029851913,0.029851913,-0.18031597,0.039573193,0.08597231,0.82451725,0.5887716,-1.0516027,-0.07258978,1.0516027,"down","GAS2L1",10634,"0001578 // microtubule bundle formation // inferred from mutant phenotype /// 0007026 // negative regulation of microtubule depolymerization // inferred from mutant phenotype /// 0007050 // cell cycle arrest // inferred from sequence or structural similarity /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0009267 // cellular response to starvation // inferred from sequence or structural similarity /// 0009267 // cellular response to starvation // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from direct assay /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0045647 // negative regulation of erythrocyte differentiation // inferred from direct assay /// 0051726 // regulation of cell cycle // inferred from direct assay /// 0097067 // cellular response to thyroid hormone stimulus // inferred from direct assay","0001725 // stress fiber // inferred from direct assay /// 0001725 // stress fiber // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation","0008017 // microtubule binding // inferred from direct assay /// 0008093 // cytoskeletal adaptor activity // inferred from direct assay /// 0046966 // thyroid hormone receptor binding // inferred from direct assay","chr22:29702346-29708776 (+) // 89.67 // q12.2"]
["11749176_a_at",0.13609123,0.06064987,0.065553665,-0.12205219,-0.06064987,-0.10999775,0.07484631,0.0038533085,1.1368155,0.18499818,1.1368155,"up","RIOK3",8780,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007059 // chromosome segregation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr18:21033250-21061544 (+) // 99.95 // q11.2"]
["11719577_a_at",-0.40215445,0.036342144,0.005915165,-0.0968709,-0.005915165,0.18057919,0.7177597,0.42201445,-1.1064181,-0.1458967,1.1064181,"down","AMT",275,"0006546 // glycine catabolic process // inferred from electronic annotation /// 0006546 // glycine catabolic process // traceable author statement /// 0032259 // methylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement","0004047 // aminomethyltransferase activity // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008483 // transaminase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr3:49454210-49460111 (-) // 94.96 // p21.31"]
["11741646_s_at",0.03626442,-0.002523899,-0.12278652,-0.42161798,0.002523899,0.13697577,0.89606494,0.7316911,1.0456191,0.06435744,1.0456191,"up","ATXN7L1",222255,"","","","chr7:105245220-105319653 (-) // 98.34 // q22.3"]
["11720729_at",-0.14853859,-0.058080196,0.058080673,-0.0992074,0.18870258,0.14706755,0.62000495,0.3000397,-1.0930557,-0.12836695,1.0930557,"down","CSDC2",27254,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006398 // histone mRNA 3'-end processing // non-traceable author statement","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation","chr22:41956766-41972670 (+) // 96.31 // q13.2"]
["11729235_s_at",0.06765175,-0.10938597,0.041252613,0.008119106,-0.008119583,-0.19506502,0.76449466,0.48977494,1.0459844,0.06486132,1.0459844,"up","E2F6",1876,"0000083 // regulation of transcription involved in G1/S phase of mitotic cell cycle // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0071339 // MLL1 complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // traceable author statement","chr2:11584500-11606303 (-) // 83.35 // p25.1"]
["11719930_a_at",0.23039055,-0.011106491,-0.10420513,0.29842377,0.011106491,-0.018328667,0.88184595,0.70039284,-1.0415323,-0.05870755,1.0415323,"down","ARGLU1",55082,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","","chr13:107194928-107220512 (-) // 94.79 // q33.3"]
["11733612_s_at",-0.18889284,-0.07054329,0.0017719269,-0.0017719269,0.27199173,0.092250824,0.36713865,0.10173149,-1.1540546,-0.20671153,1.1540546,"down","DOCK8",81704,"0007596 // blood coagulation // traceable author statement","0005829 // cytosol // traceable author statement","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0051020 // GTPase binding // inferred from electronic annotation","chr9:214864-465255 (+) // 98.62 // p24.3"]
["11745881_a_at",0.12986755,-0.08787298,-0.20840025,-0.031523228,0.15805244,0.03152275,0.6987125,0.39498228,-1.0778471,-0.10815257,1.0778471,"down","GUCA1A",2978,"0007165 // signal transduction // non-traceable author statement /// 0007601 // visual perception // inferred from electronic annotation /// 0007601 // visual perception // traceable author statement /// 0007602 // phototransduction // inferred from electronic annotation /// 0031282 // regulation of guanylate cyclase activity // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation /// 0008048 // calcium sensitive guanylate cyclase activator activity // traceable author statement /// 0008048 // calcium sensitive guanylate cyclase activator activity // inferred from electronic annotation /// 0030249 // guanylate cyclase regulator activity // inferred from electronic annotation","chr6:42123183-42147806 (+) // 92.41 // p21.1"]
["11750096_a_at",-0.048961163,0.059855938,0.232306,-0.037383556,0.03215885,-0.03215885,0.6489822,0.33236772,1.0669763,0.093528144,1.0669763,"up","CTNND2",1501,"0001763 // morphogenesis of a branching structure // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007158 // neuron cell-cell adhesion // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007612 // learning // inferred from electronic annotation /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005912 // adherens junction // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr5:10972992-11904092 (-) // 99.76 // p15.2"]
["11723609_a_at",0.049176455,0.03884673,-0.059318304,-0.06254053,-0.03884673,0.04196644,0.81035924,0.5647565,1.02057,0.029375196,1.02057,"up","HABP2",3026,"0006508 // proteolysis // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005539 // glycosaminoglycan binding // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr10:115312736-115349367 (+) // 99.84 // q25.3"]
["11727450_a_at",0.17465353,0.022057533,-0.22875023,-0.022057533,0.04034376,-0.03536749,0.9893567,0.9688205,-1.003462,-0.0049859225,1.003462,"down","MORN4",118812,"","","","chr10:99374311-99393344 (-) // 79.38 // q24.2"]
["11736473_a_at",-0.009932041,-0.013559818,0.009932041,-0.12983227,0.0146660805,0.028914928,0.8624718,0.6608916,1.0169371,0.024230499,1.0169371,"up","TCF7",6932,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // not recorded /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // not recorded /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006955 // immune response // traceable author statement /// 0007420 // brain development // not recorded /// 0016055 // Wnt receptor signaling pathway // not recorded /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0022008 // neurogenesis // not recorded /// 0030538 // embryonic genitalia morphogenesis // inferred from electronic annotation /// 0033153 // T cell receptor V(D)J recombination // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0046632 // alpha-beta T cell differentiation // inferred from electronic annotation /// 0048557 // embryonic digestive tract morphogenesis // inferred from electronic annotation /// 0048619 // embryonic hindgut morphogenesis // inferred from electronic annotation /// 0048699 // generation of neurons // not recorded /// 0060070 // canonical Wnt receptor signaling pathway // not recorded /// 0071353 // cellular response to interleukin-4 // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // not recorded","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // not recorded /// 0043565 // sequence-specific DNA binding // not recorded /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay","chr5:133451300-133483919 (+) // 89.87 // q31.1"]
["11739863_a_at",-0.20703793,-0.070495605,-0.09069061,0.070495605,0.23849392,0.11752987,0.14403883,0.015691498,-1.2015648,-0.26491442,1.2015648,"down","TTF2",8458,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006353 // transcription termination, DNA-dependent // traceable author statement /// 0006353 // transcription termination, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008023 // transcription elongation factor complex // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0008094 // DNA-dependent ATPase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr1:117602948-117645489 (+) // 89.78 // p13.1"]
["11735984_at",0.26811075,0.18669987,0.28059626,-0.27714825,-0.18669987,-0.28473043,0.027066398,0.00032919497,1.4089904,0.49466175,1.4089904,"up","OR2B6",26212,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr6:27925018-27925960 (+) // 99.16 // p22.1"]
["11727105_s_at",0.002575159,-0.059300423,-0.0025749207,-0.025604725,0.034085512,0.05583954,0.5792898,0.25959265,-1.0289742,-0.041206773,1.0289742,"down","FGD5",152273,"0007010 // cytoskeleton organization // inferred from sequence or structural similarity /// 0008360 // regulation of cell shape // inferred from sequence or structural similarity /// 0030036 // actin cytoskeleton organization // inferred from sequence or structural similarity /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0043088 // regulation of Cdc42 GTPase activity // inferred from sequence or structural similarity /// 0046847 // filopodium assembly // inferred from sequence or structural similarity","0001726 // ruffle // inferred from sequence or structural similarity /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from sequence or structural similarity","0005085 // guanyl-nucleotide exchange factor activity // inferred from sequence or structural similarity /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0031267 // small GTPase binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:14860482-14976072 (+) // 98.53 // p25.1"]
["11756401_x_at",-0.059954643,-0.027151108,0.005839348,0.08603287,-0.005839348,0.02517414,0.41897348,0.132465,-1.0440649,-0.062211365,1.0440649,"down","FAM49B",51571,"","","","chr8:130853718-131028697 (-) // 70.01 // q24.21"]
["11735552_at",0.09828663,-0.058122873,-0.1370213,-0.15332508,0.12554789,0.058122873,0.88913023,0.7166143,-1.0298263,-0.042400997,1.0298263,"down","FCRL6",343413,"","0009897 // external side of plasma membrane // inferred from direct assay /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from electronic annotation","chr1:159770301-159786047 (+) // 84.62 // q23.2"]
["11757770_s_at",-0.09942436,-0.04707241,-0.03757286,0.19142532,0.23167896,0.03757286,0.18477026,0.025921771,-1.160636,-0.21491551,1.160636,"down","TOMM70A",9868,"0006626 // protein targeting to mitochondrion // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005742 // mitochondrial outer membrane translocase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008320 // protein transmembrane transporter activity // traceable author statement","chr3:100082307-100082909 (-) // 90.92 // q12.2"]
["11728073_a_at",-0.012883186,0.012883186,0.030423164,0.04468918,-0.18395805,-0.17578077,0.5165031,0.20399591,1.0830934,0.115157664,1.0830934,"up","ITPRIP",85450,"","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","","chr10:106071900-106093713 (-) // 98.8 // q25.1"]
["11743191_a_at",-0.20537257,0.35130453,0.01931429,-0.055998802,0.106368065,-0.01931429,0.9271711,0.80433667,1.0314904,0.04473046,1.0314904,"up","LOC100653217 /// NTM","100653217 /// 50863","0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0008038 // neuron recognition // traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr11:131780518-132206715 (+) // 96.55 // q25"]
["11721561_a_at",-0.09594679,-0.06508398,0.028963089,-0.028963089,0.23950768,0.044258118,0.5345374,0.21878114,-1.0935028,-0.12895685,1.0935028,"down","AHCYL2",23382,"0006730 // one-carbon metabolic process // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0004013 // adenosylhomocysteinase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr7:128864870-129070051 (+) // 93.63 // q32.1"]
["11740776_a_at",-0.2084074,0.025297642,-0.025297642,-0.37739992,0.16183662,0.108055115,0.95139676,0.8650112,-1.0235865,-0.033633042,1.0235865,"down","CCDC36",339834,"","","","chr3:49235860-49295537 (+) // 94.67 // p21.31"]
["11750796_a_at",0.2867403,0.07600212,0.00074863434,-0.00074863434,-0.12858105,-0.21438313,0.34456745,0.08964544,1.1775062,0.23573466,1.1775062,"up","DNER",92737,"0001764 // neuron migration // non-traceable author statement /// 0006897 // endocytosis // non-traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007220 // Notch receptor processing // inferred from electronic annotation /// 0007416 // synapse assembly // non-traceable author statement /// 0007417 // central nervous system development // inferred from expression pattern /// 0010001 // glial cell differentiation // inferred from electronic annotation /// 0048741 // skeletal muscle fiber development // inferred from electronic annotation","0005769 // early endosome // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from direct assay /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0005112 // Notch binding // inferred from electronic annotation /// 0005509 // calcium ion binding // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030276 // clathrin binding // traceable author statement","chr2:230222831-230451615 (-) // 97.71 // q36.3"]
["11756636_x_at",0.39687347,-0.0068626404,-0.15236616,-0.12915659,0.0068621635,0.14514685,0.888171,0.71465194,1.0508796,0.07159738,1.0508796,"up","PCED1A",64773,"","","0016787 // hydrolase activity // inferred from electronic annotation","chr20:2816005-2821314 (-) // 93.58 // p13"]
["11730313_a_at",0.09901285,-0.19373941,-0.068255424,0.24239159,0.050055504,-0.050055504,0.64267707,0.32539144,-1.0981876,-0.13512447,1.0981876,"down","ERMAP",114625,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","","chr1:43282758-43310655 (+) // 82.7 // p34.2"]
["11734540_at",0.13576984,0,0,0.36564088,-0.07190871,-0.025443554,0.91572034,0.77723604,-1.0310919,-0.044172965,1.0310919,"down","LOC728819",728819,"","","","chr2:43902291-43903461 (-) // 83.18 // p21"]
["11715925_a_at",0.04346466,-0.1182127,0.0669651,9.441376e-5,-9.441376e-5,-0.13140678,0.8317065,0.60183257,1.028975,0.041207943,1.028975,"up","TRAM1",23471,"0006412 // translation // traceable author statement /// 0006613 // cotranslational protein targeting to membrane // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004872 // receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr8:71485454-71520714 (-) // 92.64 // q13.3"]
["11745325_a_at",-0.04062462,0.0023784637,-0.0023784637,-0.15287638,0.15553951,0.27946854,0.73958355,0.45202765,-1.0774235,-0.10758537,1.0774235,"down","ZNF497",162968,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:58866926-58874214 (-) // 99.96 // q13.43"]
["11752744_a_at",-0.039312363,-0.008275986,-0.08480549,0.008275986,0.0685873,0.104774475,0.23861842,0.04328899,-1.0752537,-0.104677126,1.0752537,"down","LGMN",5641,"0001101 // response to acid // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // inferred from sequence or structural similarity /// 0008202 // steroid metabolic process // traceable author statement /// 0040015 // negative regulation of multicellular organism growth // inferred from electronic annotation /// 0042359 // vitamin D metabolic process // traceable author statement /// 0043524 // negative regulation of neuron apoptotic process // inferred from genetic interaction /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement","0005764 // lysosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from electronic annotation /// 0043202 // lysosomal lumen // traceable author statement /// 0045177 // apical part of cell // inferred from electronic annotation","0004197 // cysteine-type endopeptidase activity // inferred from electronic annotation /// 0004197 // cysteine-type endopeptidase activity // inferred from sequence or structural similarity /// 0008233 // peptidase activity // inferred from direct assay /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr14:93170472-93214972 (-) // 95.86 // q32.12"]
["11736147_s_at",-0.0067424774,0.030794144,-0.050346375,0.05892372,0.0067424774,-0.16844273,0.9019375,0.74335206,1.0178281,0.025493937,1.0178281,"up","LYRM2 /// ZC3H11A","57226 /// 9877","","0005739 // mitochondrion // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:90341944-90348475 (-) // 64.9 // q15"]
["11727772_a_at",0.077172756,0.15821552,-0.10607052,0,-0.05431795,0,0.76327574,0.4880578,1.0433419,0.061211966,1.0433419,"up","PITPNM2",57605,"0006810 // transport // inferred from electronic annotation /// 0008152 // metabolic process // non-traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005509 // calcium ion binding // non-traceable author statement /// 0008289 // lipid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:123468026-123634562 (-) // 98.54 // q24.31"]
["11747878_a_at",0.095477104,0.15363932,0.065870285,-0.20199156,-0.23396349,-0.06586981,0.111214995,0.009138145,1.207707,0.27227053,1.207707,"up","STX3",6809,"0006810 // transport // inferred from electronic annotation /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0006944 // cellular membrane fusion // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0031175 // neuron projection development // inferred from electronic annotation /// 0034599 // cellular response to oxidative stress // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005773 // vacuole // traceable author statement /// 0005911 // cell-cell junction // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030426 // growth cone // inferred from sequence or structural similarity /// 0030426 // growth cone // inferred from electronic annotation /// 0031201 // SNARE complex // inferred from sequence or structural similarity /// 0031201 // SNARE complex // inferred from electronic annotation /// 0042581 // specific granule // inferred from direct assay /// 0042582 // azurophil granule // inferred from direct assay /// 0043005 // neuron projection // inferred from sequence or structural similarity /// 0043005 // neuron projection // inferred from electronic annotation","0005484 // SNAP receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0050544 // arachidonic acid binding // inferred from sequence or structural similarity /// 0050544 // arachidonic acid binding // inferred from electronic annotation","chr11:59522924-59568958 (+) // 96.76 // q12.1"]
["11715826_x_at",0.2658558,0.006263733,-0.006263733,0.15226936,-0.08557892,-0.13969421,0.7174537,0.42110866,1.0814396,0.11295311,1.0814396,"up","HMG20B",10362,"0006325 // chromatin organization // non-traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr19:3572942-3579233 (+) // 92.13 // p13.3"]
["11751973_x_at",-0.13563967,0.0010428429,-0.0010428429,-0.17152452,0.06444597,0.057037354,0.91175085,0.7662919,-1.0199744,-0.028532874,1.0199744,"down","PROSAPIP1",9762,"0051260 // protein homooligomerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from sequence or structural similarity /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0030165 // PDZ domain binding // inferred from electronic annotation /// 0043621 // protein self-association // inferred from electronic annotation","chr20:3143274-3154194 (-) // 95.54 // p13"]
["11720944_at",0.11887479,0.013996124,0.19571638,-0.013996124,-0.15562606,-0.27745938,0.25488248,0.049154986,1.196281,0.25855625,1.196281,"up","RGS16",6004,"0007601 // visual perception // traceable author statement /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // traceable author statement /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation /// 0038032 // termination of G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // not recorded /// 0043547 // positive regulation of GTPase activity // traceable author statement","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded /// 0005886 // plasma membrane // not recorded /// 0045121 // membrane raft // inferred from electronic annotation","0005096 // GTPase activator activity // not recorded /// 0005096 // GTPase activator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // traceable author statement","chr1:182567757-182573548 (-) // 88.47 // q25.3"]
["11719697_a_at",0.22632313,-0.10988808,-0.20143127,0.21903992,0.07719898,-0.07719898,0.80263835,0.550497,-1.0727735,-0.10134544,1.0727735,"down","HSPB11",51668,"0006950 // response to stress // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation","0005929 // cilium // inferred from electronic annotation /// 0030992 // intraflagellar transport particle B // inferred from electronic annotation","","chr1:54387233-54411602 (-) // 73.84 // p32.3"]
["11750814_a_at",-0.06544471,0.035365105,0.10313296,-0.04814315,0.28854823,-0.035365343,0.897094,0.7336393,-1.0309651,-0.04399548,1.0309651,"down","BEND2",139105,"","","","chrX:18189058-18238956 (-) // 92.07 // p22.13"]
["11760040_x_at",-0.48688316,0.029808998,-0.005818367,0.23185825,0.005818367,-0.13502598,0.69856095,0.39482057,-1.1395897,-0.18851444,1.1395897,"down","NDUFB4",4710,"0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from direct assay /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation","0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement /// 0008137 // NADH dehydrogenase (ubiquinone) activity // inferred from electronic annotation","chr3:120315156-120320471 (+) // 99.33 // q13.33"]
["11740214_a_at",-0.062199593,0.0498724,-0.09288883,0.07212639,0.02672863,-0.02672863,0.6364367,0.31867173,-1.0418259,-0.059114195,1.0418259,"down","TBL1X",6907,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006508 // proteolysis // inferred from mutant phenotype /// 0007219 // Notch signaling pathway // traceable author statement /// 0007605 // sensory perception of sound // inferred from mutant phenotype /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048545 // response to steroid hormone stimulus // inferred from electronic annotation /// 0060070 // canonical Wnt receptor signaling pathway // inferred from mutant phenotype","0000118 // histone deacetylase complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005876 // spindle microtubule // inferred from direct assay /// 0017053 // transcriptional repressor complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from genetic interaction /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0042393 // histone binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation","chrX:9431105-9687780 (+) // 97.47 // p22.31"]
["11723347_a_at",-0.2561798,-0.06984615,-0.043974876,0.09392452,0.043974876,0.06972027,0.2515027,0.04803517,-1.142774,-0.1925401,1.142774,"down","MTERFD1",51001,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay","chr8:97251648-97273828 (-) // 88.33 // q22.1"]
["11738156_a_at",0.095294,0.1916995,-0.07315588,0.061097622,-0.061097145,-0.1744628,0.597626,0.27740318,1.093864,0.12943333,1.093864,"up","ZBTB26",57684,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:125680378-125693544 (-) // 95.61 // q33.2"]
["11716129_at",-0.09105587,-0.2707405,-0.4199171,0.5195799,0.18459034,0.09105587,0.2023202,0.031010553,-1.4395785,-0.5256465,1.4395785,"down","IGF2R",3482,"0006810 // transport // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0048009 // insulin-like growth factor receptor signaling pathway // traceable author statement","0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005641 // nuclear envelope lumen // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from direct assay /// 0030140 // trans-Golgi network transport vesicle // inferred from direct assay","0001948 // glycoprotein binding // inferred from direct assay /// 0001948 // glycoprotein binding // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005010 // insulin-like growth factor-activated receptor activity // traceable author statement /// 0005215 // transporter activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005520 // insulin-like growth factor binding // inferred from electronic annotation /// 0005537 // mannose binding // inferred from electronic annotation /// 0051219 // phosphoprotein binding // inferred from direct assay","chr6:160390130-160527581 (+) // 98.1 // q25.3"]
["11756882_a_at",-0.07859421,0.15467548,0.2886467,-0.05100441,-0.015646935,0.015647411,0.59231895,0.27254227,1.100819,0.13857727,1.100819,"up","RTTN",25914,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from electronic annotation","","","chr18:67671044-67863889 (-) // 97.69 // q22.2"]
["11755637_x_at",0.0558877,0.006505966,0.06299114,-0.09127045,-0.050893784,-0.0065054893,0.22658418,0.039147068,1.0653677,0.09135144,1.0653677,"up","ARHGEF10L",55160,"0032321 // positive regulation of Rho GTPase activity // inferred from direct assay /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035104 // positive regulation of transcription via sterol regulatory element binding // inferred from direct assay /// 0051496 // positive regulation of stress fiber assembly // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // inferred from direct assay","chr1:17941582-18024363 (+) // 89.68 // p36.13"]
["11718996_at",-0.024087429,0.5232425,-0.22964215,0.11238098,-0.015709162,0.015709162,0.93824977,0.82954663,1.0369723,0.052377336,1.0369723,"up","MSRB2",22921,"0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0030091 // protein repair // inferred from sequence or structural similarity /// 0030091 // protein repair // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation","0000318 // protein-methionine-R-oxide reductase activity // inferred from sequence or structural similarity /// 0000318 // protein-methionine-R-oxide reductase activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0008113 // peptide-methionine-(S)-S-oxide reductase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from sequence or structural similarity /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:23384377-23411276 (+) // 57.95 // p12.2"]
["11742377_at",-0.0003681183,0.1288042,0.015455723,-0.093384266,-0.0351367,0.0003681183,0.42710766,0.13791613,1.0648731,0.090681516,1.0648731,"up","OR7C2",26658,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr19:15052300-15053260 (+) // 99.69 // p13.12"]
["11736548_s_at",-0.01196146,0.011961937,0.054175854,0.19221687,-0.1478343,-0.1742549,0.84932077,0.63494,1.0434414,0.0613496,1.0434414,"up","FANCD2",2177,"0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007129 // synapsis // inferred from electronic annotation /// 0007276 // gamete generation // inferred from electronic annotation /// 0010332 // response to gamma radiation // inferred from direct assay","0000793 // condensed chromosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr3:10068070-10141344 (+) // 93.96 // p25.3"]
["11747866_a_at",-0.02283001,0.02283001,-0.09886265,0.23415422,0.14007473,-0.075647354,0.56844735,0.24914095,-1.0961775,-0.13248137,1.0961775,"down","RBL2",5934,"0000080 // G1 phase of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0043550 // regulation of lipid kinase activity // inferred from direct assay /// 0051726 // regulation of cell cycle // inferred from electronic annotation","0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr16:53483880-53524532 (+) // 99.86 // q12.2"]
["11719799_a_at",-0.03198433,-0.02305317,-0.0065374374,0.23277855,0.058989525,0.0065374374,0.4535283,0.15606076,-1.0867049,-0.11996015,1.0867049,"down","MBD4",8930,"0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006284 // base-excision repair // inferred from electronic annotation /// 0006284 // base-excision repair // traceable author statement /// 0006285 // base-excision repair, AP site formation // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0008630 // DNA damage response, signal transduction resulting in induction of apoptosis // inferred from electronic annotation /// 0009314 // response to radiation // inferred from electronic annotation /// 0045008 // depyrimidination // traceable author statement","0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003696 // satellite DNA binding // traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004520 // endodeoxyribonuclease activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation","chr3:129149788-129159022 (-) // 86.25 // q21.3"]
["11742511_a_at",0,-0.08250809,-0.36947298,0.1643486,0,0.13266897,0.38487533,0.11174202,-1.1889321,-0.24966627,1.1889321,"down","IL4R",3566,"0002532 // production of molecular mediator involved in inflammatory response // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0030728 // ovulation // inferred from electronic annotation /// 0035771 // interleukin-4-mediated signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043032 // positive regulation of macrophage activation // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0045626 // negative regulation of T-helper 1 cell differentiation // inferred from electronic annotation /// 0045630 // positive regulation of T-helper 2 cell differentiation // inferred from electronic annotation /// 0090197 // positive regulation of chemokine secretion // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004896 // cytokine receptor activity // inferred from electronic annotation /// 0004913 // interleukin-4 receptor activity // traceable author statement /// 0005057 // receptor signaling protein activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043560 // insulin receptor substrate binding // inferred from reviewed computational analysis","chr16:27325250-27364017 (+) // 70.52 // p12.1"]
["11741910_s_at",-0.19835949,0.07887101,0.09607029,0.047086,-0.047086,-0.18786001,0.86408716,0.6646448,1.0387251,0.054813944,1.0387251,"up","PKNOX2",63876,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from electronic annotation","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003785 // actin monomer binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from electronic annotation","chr11:125034558-125303282 (+) // 97.22 // q24.2"]
["11759627_at",0.5733309,0.15005064,-0.16482067,0.12564659,-0.26758146,-0.12564659,0.6376513,0.3200714,1.2103136,0.27538085,1.2103136,"up","USP15",9958,"0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0016579 // protein deubiquitination // inferred from direct assay","","0003824 // catalytic activity // inferred from electronic annotation /// 0004197 // cysteine-type endopeptidase activity // traceable author statement /// 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0004843 // ubiquitin-specific protease activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr12:62654160-62730474 (+) // 82.6 // q14.1"]
["11718129_x_at",0.23398018,0.020155907,-0.020155907,0.027116776,-0.31710052,-0.27965832,0.39402232,0.11735715,1.2040323,0.2678741,1.2040323,"up","ARL2",402,"0006184 // GTP catabolic process // inferred from mutant phenotype /// 0007021 // tubulin complex assembly // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0010811 // positive regulation of cell-substrate adhesion // inferred from sequence or structural similarity /// 0015870 // acetylcholine transport // inferred from electronic annotation /// 0031113 // regulation of microtubule polymerization // inferred from mutant phenotype /// 0031116 // positive regulation of microtubule polymerization // inferred from direct assay /// 0034260 // negative regulation of GTPase activity // inferred from direct assay /// 0051297 // centrosome organization // inferred from mutant phenotype /// 0051457 // maintenance of protein location in nucleus // inferred from direct assay /// 0070830 // tight junction assembly // inferred from sequence or structural similarity","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from direct assay /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016328 // lateral plasma membrane // inferred from sequence or structural similarity","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from mutant phenotype /// 0005095 // GTPase inhibitor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from mutant phenotype /// 0005525 // GTP binding // inferred from electronic annotation /// 0019003 // GDP binding // inferred from electronic annotation","chr11:64781423-64789656 (+) // 95.24 // q13.1"]
["11734958_s_at",-0.27866888,0.037567616,0.11623287,-0.03756714,0.1693306,-0.19984055,0.9685549,0.9121604,-1.013208,-0.018930418,1.013208,"down","C14orf135",64430,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr14:60558544-60601530 (+) // 99.38 // q23.1"]
["11759275_at",-0.311244,-0.034767866,0.034767866,-0.19785762,0.087641954,0.14797306,0.75945306,0.4816865,-1.0839767,-0.116333805,1.0839767,"down","OR2M3",127062,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr1:248366331-248367393 (+) // 100.0 // q44"]
["11745871_a_at",0.0047445297,0.06593895,0.185462,-0.10317421,-0.0047445297,-0.100361824,0.2983068,0.06742174,1.113274,0.15480869,1.113274,"up","PAPOLA",10914,"0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006378 // mRNA polyadenylation // non-traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031123 // RNA 3'-end processing // inferred from electronic annotation /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0043631 // RNA polyadenylation // inferred from sequence or structural similarity /// 0043631 // RNA polyadenylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from sequence or structural similarity /// 0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0004652 // polynucleotide adenylyltransferase activity // inferred from sequence or structural similarity /// 0004652 // polynucleotide adenylyltransferase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:96968770-97033420 (+) // 97.22 // q32.2"]
["11734814_a_at",0.25583792,0.015217304,0.19430208,-0.015217304,-0.15111303,-0.3356018,0.26132166,0.05180348,1.2504348,0.32242978,1.2504348,"up","PDE1A",5136,"0000042 // protein targeting to Golgi // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement","0005829 // cytosol // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004114 // 3',5'-cyclic-nucleotide phosphodiesterase activity // inferred from electronic annotation /// 0004117 // calmodulin-dependent cyclic-nucleotide phosphodiesterase activity // traceable author statement /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0008081 // phosphoric diester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:183006903-183387425 (-) // 97.1 // q32.1"]
["11722465_a_at",0.3171811,0.048231125,-0.019797802,0.019797802,-0.038516045,-0.2514062,0.50439,0.1944651,1.1528832,0.20524631,1.1528832,"up","C17orf80",55028,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr17:71228867-71245093 (+) // 98.03 // q25.1"]
["11719993_x_at",0.15803814,0.043673515,-0.043673515,0.09163475,-0.18048096,-0.19254875,0.5722937,0.25247017,1.1068637,0.14647762,1.1068637,"up","NLK",51701,"0000165 // MAPK cascade // inferred from sequence or structural similarity /// 0000165 // MAPK cascade // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from mutant phenotype /// 0007243 // intracellular protein kinase cascade // inferred from sequence or structural similarity /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018107 // peptidyl-threonine phosphorylation // inferred from sequence or structural similarity /// 0018107 // peptidyl-threonine phosphorylation // inferred from electronic annotation /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from sequence or structural similarity /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0033136 // serine phosphorylation of STAT3 protein // inferred from sequence or structural similarity /// 0033136 // serine phosphorylation of STAT3 protein // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from sequence or structural similarity /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004707 // MAP kinase activity // inferred from sequence or structural similarity /// 0004707 // MAP kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042169 // SH2 domain binding // inferred from sequence or structural similarity /// 0042169 // SH2 domain binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:26368784-26523402 (+) // 91.63 // q11.2"]
["11733607_a_at",0.08787513,-0.020599365,-0.06304407,0.020599365,0.09609914,-0.071267605,0.94442207,0.84541965,-1.0095645,-0.013733113,1.0095645,"down","LRRC34",151827,"","","","chr3:169511268-169530312 (-) // 97.6 // q26.2"]
["11721035_x_at",0.02981472,-0.33001137,-0.21978998,0.026328087,-0.026328087,0.12288904,0.4242126,0.13601023,-1.1601343,-0.21429184,1.1601343,"down","PPP1R3B",79660,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005977 // glycogen metabolic process // inferred from electronic annotation","","","chr8:8993764-9008220 (-) // 88.24 // p23.1"]
["11742980_a_at",-0.025582075,0.013649702,0.12351203,0.024027824,-0.013649702,-0.060020447,0.6641602,0.34985584,1.0379527,0.053740647,1.0379527,"up","ANKS1B",56899,"","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0015030 // Cajal body // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0046875 // ephrin receptor binding // inferred from physical interaction","chr12:99137995-99548542 (-) // 97.01 // q23.1"]
["11717748_x_at",-0.019686699,0.0029306412,-0.028188705,0.21129131,0.17888641,-0.0029306412,0.36212853,0.09905291,-1.1050135,-0.14406398,1.1050135,"down","MCTS1",28985,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0040008 // regulation of growth // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation","chrX:119737687-119755014 (+) // 74.21 // q24"]
["11742257_a_at",-0.13249063,0.003546238,-0.003546238,-0.16411686,0.08546233,0.13843608,0.81204534,0.5683245,-1.0454259,-0.064090796,1.0454259,"down","PTGER3",5733,"0001660 // fever generation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007200 // phospholipase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0008219 // cell death // traceable author statement /// 0015701 // bicarbonate transport // inferred from electronic annotation /// 0030522 // intracellular receptor mediated signaling pathway // traceable author statement /// 0031622 // positive regulation of fever generation // inferred from sequence or structural similarity /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0035810 // positive regulation of urine volume // inferred from electronic annotation","0005635 // nuclear envelope // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004955 // prostaglandin receptor activity // inferred from electronic annotation /// 0004957 // prostaglandin E receptor activity // inferred from electronic annotation /// 0004957 // prostaglandin E receptor activity // non-traceable author statement /// 0004957 // prostaglandin E receptor activity // traceable author statement","chr1:71418114-71513491 (-) // 92.12 // p31.1"]
["11752824_a_at",0.35945797,0.10443163,0.16115904,-0.10443163,-0.22808933,-0.28774023,0.12459899,0.01166922,1.333394,0.4151032,1.333394,"up","C17orf61-PLSCR3 /// PLSCR3","100529211 /// 57048","0017121 // phospholipid scrambling // non-traceable author statement /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0042632 // cholesterol homeostasis // inferred from electronic annotation /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0017128 // phospholipid scramblase activity // non-traceable author statement /// 0048306 // calcium-dependent protein binding // inferred from physical interaction","chr17:7293535-7307414 (-) // 97.7 // p13.1"]
["11751321_a_at",0.51962996,0.08540869,0.23511028,-0.08540869,-0.2170186,-0.51709366,0.22139551,0.037399113,1.4673605,0.5532234,1.4673605,"up","CRIM1",51232,"0001558 // regulation of cell growth // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0048009 // insulin-like growth factor receptor signaling pathway // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004857 // enzyme inhibitor activity // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005010 // insulin-like growth factor-activated receptor activity // traceable author statement /// 0005520 // insulin-like growth factor binding // inferred from electronic annotation","chr2:36744515-36776110 (+) // 88.26 // p22.2"]
["11756118_s_at",-0.058906555,-0.22699547,0.038288116,0.029330254,0.2699318,-0.029330254,0.54068846,0.22374128,-1.1270217,-0.17251526,1.1270217,"down","MLL5",55904,"0002446 // neutrophil mediated immunity // inferred from sequence or structural similarity /// 0002446 // neutrophil mediated immunity // inferred from electronic annotation /// 0006306 // DNA methylation // inferred from sequence or structural similarity /// 0006306 // DNA methylation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030218 // erythrocyte differentiation // inferred from sequence or structural similarity /// 0030218 // erythrocyte differentiation // inferred from electronic annotation /// 0030854 // positive regulation of granulocyte differentiation // inferred from mutant phenotype /// 0032259 // methylation // inferred from electronic annotation /// 0034968 // histone lysine methylation // inferred from electronic annotation /// 0042119 // neutrophil activation // inferred from sequence or structural similarity /// 0042119 // neutrophil activation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0048384 // retinoic acid receptor signaling pathway // inferred from mutant phenotype /// 0051568 // histone H3-K4 methylation // inferred from direct assay /// 0071300 // cellular response to retinoic acid // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation /// 0070688 // MLL5-L complex // inferred from direct assay","0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:104753404-104754527 (+) // 99.05 // q22.3"]
["11728751_a_at",-0.037861824,-0.14387989,-0.10635233,0.3415904,0.17079926,0.037861824,0.22944547,0.04003625,-1.2137308,-0.27944848,1.2137308,"down","OSBP",5007,"0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation /// 0008142 // oxysterol binding // traceable author statement /// 0008289 // lipid binding // inferred from electronic annotation","chr11:59341871-59383617 (-) // 94.22 // q12.1"]
["11715402_x_at",-0.004504204,0.00450325,0.019519806,-0.044275284,0.07460308,-0.011680603,0.997648,0.99397206,1.0002015,0.0002906214,1.0002015,"up","ILF2",3608,"0006351 // transcription, DNA-dependent // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr1:153634263-153643471 (-) // 64.49 // q21.3"]
["11760528_at",0.07998037,0.0645628,-0.12120628,-0.3721838,0.027436256,-0.027436256,0.7037977,0.40206018,1.0956904,0.13184017,1.0956904,"up","RDM1",201299,"0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015030 // Cajal body // inferred from electronic annotation /// 0016605 // PML body // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr17:34249158-34257770 (-) // 85.03 // q12"]
["11744420_at",-0.050923347,-0.03739643,-0.17671156,0.072859764,0.037396908,0.07598543,0.20168886,0.030889472,-1.109896,-0.15042442,1.109896,"down","MIR600 /// MIR600HG","693185 /// 81571","","","","chr9:125871772-125877756 (-) // 95.55 // q33.3"]
["11761323_at",-0.060528755,0.053319454,-0.080397606,-0.053319454,0.07082081,0.13061619,0.6325747,0.31428018,-1.0559744,-0.07857481,1.0559744,"down","COMMD9",29099,"","","","chr11:36296052-36310976 (-) // 89.17 // p13"]
["11744583_s_at",0.0768466,0.07416248,-0.05163479,0.010588169,-0.01884079,-0.010588646,0.7119248,0.4141112,1.02769,0.03940522,1.02769,"up","AMDHD2 /// CEMP1","51005 /// 752014","0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006044 // N-acetylglucosamine metabolic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0008448 // N-acetylglucosamine-6-phosphate deacetylase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016810 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds // inferred from electronic annotation","chr16:2570365-2579732 (+) // 99.19 // p13.3"]
["11758184_x_at",0.0011739731,-0.0011739731,0.028726578,-0.014535904,0.04943943,-0.024896622,0.9324228,0.81626296,1.0043346,0.006239947,1.0043346,"up","KRT8",3856,"0007010 // cytoskeleton organization // non-traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005882 // intermediate filament // non-traceable author statement /// 0005882 // intermediate filament // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0045095 // keratin filament // inferred from electronic annotation","0005198 // structural molecule activity // non-traceable author statement /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr12:53293746-53298821 (-) // 86.05 // q13.13"]
["11725061_a_at",0.26147747,-0.0044031143,0.0044031143,0.055799484,-0.11497402,-0.13825893,0.5408908,0.22431237,1.1118562,0.15297024,1.1118562,"up","USP7",7874,"0006281 // DNA repair // inferred from electronic annotation /// 0006283 // transcription-coupled nucleotide-excision repair // inferred from mutant phenotype /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016579 // protein deubiquitination // inferred from direct assay /// 0016579 // protein deubiquitination // inferred from mutant phenotype /// 0031647 // regulation of protein stability // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation","0002039 // p53 binding // inferred from direct assay /// 0004197 // cysteine-type endopeptidase activity // traceable author statement /// 0004221 // ubiquitin thiolesterase activity // inferred from mutant phenotype /// 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0004843 // ubiquitin-specific protease activity // inferred from mutant phenotype /// 0004843 // ubiquitin-specific protease activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr16:8985953-9057341 (-) // 95.32 // p13.2"]
["11751316_x_at",-0.0653038,-0.057289124,0.059652805,0.22838545,-0.051774025,0.051774025,0.6613993,0.3470407,-1.0696275,-0.09710849,1.0696275,"down","EPS8L1",54869,"0016310 // phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation","chr19:55591759-55599057 (+) // 97.73 // q13.42"]
["11719866_at",-0.00016736984,0.000166893,0.006918907,-0.047344208,-0.017843723,0.11308336,0.92384815,0.795681,-1.0095127,-0.013659007,1.0095127,"down","SVEP1",79987,"0007155 // cell adhesion // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr9:113127527-113342160 (-) // 98.99 // q31.3"]
["11747376_s_at",-0.100806236,-0.26212788,-0.25817108,0.3272152,0.33811378,0.100806236,0.10442692,0.007885191,-1.3778448,-0.4624134,1.3778448,"down","CCPG1",9236,"0007049 // cell cycle // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 2001106 // regulation of Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr15:55651043-55665781 (-) // 91.73 // q21.3"]
["11740760_at",0.0031392574,-0.035060883,-0.124572515,-0.003139019,0.010463953,0.030954361,0.47531098,0.17234282,-1.0460302,-0.064924456,1.0460302,"down","TRPA1",8989,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0009409 // response to cold // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0048265 // response to pain // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050955 // thermoception // inferred from electronic annotation /// 0050966 // detection of mechanical stimulus involved in sensory perception of pain // inferred from electronic annotation /// 0050968 // detection of chemical stimulus involved in sensory perception of pain // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032421 // stereocilium bundle // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0015267 // channel activity // traceable author statement /// 0015267 // channel activity // inferred from electronic annotation","chr8:72933485-72987852 (-) // 95.44 // q13.3"]
["11719788_s_at",0.29900265,0.1870985,0.2294035,-0.1870985,-0.2978983,-0.40028286,0.0496726,0.0015617278,1.4475315,0.5335947,1.4475315,"up","TUBB2A",7280,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0007017 // microtubule-based process // inferred from electronic annotation /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0051258 // protein polymerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation","chr6:3153911-3157809 (-) // 96.98 // p25.2"]
["11751189_x_at",-0.07330179,-0.046397924,0.05824232,0.033625603,0.111230135,-0.033625603,0.6844045,0.3769871,-1.0407059,-0.05756245,1.0407059,"down","RIMS1",22999,"0006461 // protein complex assembly // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0006944 // cellular membrane fusion // non-traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // traceable author statement /// 0007601 // visual perception // inferred from electronic annotation /// 0014047 // glutamate secretion // traceable author statement /// 0016079 // synaptic vesicle exocytosis // traceable author statement /// 0017156 // calcium ion-dependent exocytosis // traceable author statement /// 0045055 // regulated secretory pathway // non-traceable author statement /// 0046903 // secretion // non-traceable author statement /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from sequence or structural similarity /// 0042734 // presynaptic membrane // non-traceable author statement /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005083 // small GTPase regulator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:72970401-73110962 (+) // 92.33 // q13"]
["11748164_a_at",0.0011484623,0.045026064,-0.0791409,0.016270638,-0.064802885,-0.0011484623,0.9659573,0.9051713,1.0038693,0.005571441,1.0038693,"up","VCAN",1462,"0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0008037 // cell recognition // traceable author statement /// 0008347 // glial cell migration // inferred from direct assay /// 0009611 // response to wounding // inferred from electronic annotation /// 0031103 // axon regeneration // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity","0005509 // calcium ion binding // inferred from electronic annotation /// 0005539 // glycosaminoglycan binding // traceable author statement /// 0005540 // hyaluronic acid binding // inferred from electronic annotation /// 0005540 // hyaluronic acid binding // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr5:82767582-82876981 (+) // 99.9 // q14.2"]
["11721203_at",0.13899136,-0.18768358,0.021882057,-0.021882057,-0.083226204,0.05375862,0.9794347,0.9407689,1.0056859,0.008179824,1.0056859,"up","SCARF2",91179,"0007155 // cell adhesion // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr22:20778873-20792146 (-) // 91.56 // q11.21"]
["11735804_x_at",0.23039436,-0.06994486,0.06297827,0.2989006,-0.06297827,-0.10274601,0.9482469,0.85511976,1.0210714,0.0300838,1.0210714,"up","NAT6",24142,"","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay","0008080 // N-acetyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation","chr3:50333833-50336847 (-) // 98.23 // p21.31"]
["11719412_at",0.44919395,-0.10626602,-0.15547657,0.5198517,0.10626602,-0.19437504,0.9204653,0.78830177,-1.0580666,-0.08143045,1.0580666,"down","PBX1",5087,"0001655 // urogenital system development // inferred from electronic annotation /// 0001658 // branching involved in ureteric bud morphogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0007548 // sex differentiation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0009954 // proximal/distal pattern formation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030278 // regulation of ossification // inferred from electronic annotation /// 0030325 // adrenal gland development // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0035162 // embryonic hemopoiesis // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048536 // spleen development // inferred from electronic annotation /// 0048538 // thymus development // inferred from electronic annotation /// 0048568 // embryonic organ development // inferred from electronic annotation /// 0048706 // embryonic skeletal system development // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr1:164528434-164821067 (+) // 94.97 // q23.3"]
["11726441_a_at",0.03806877,0.005578518,0.17453289,-0.13855791,-0.0055789948,-0.10843897,0.3143507,0.07491723,1.1149033,0.15691863,1.1149033,"up","ERCC6L",54821,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chrX:71424514-71458897 (-) // 98.01 // q13.1"]
["11761498_at",0.027850151,-0.025527954,-0.4671197,0.08608484,0.004085541,-0.004085541,0.6320647,0.31368425,-1.135736,-0.1836275,1.135736,"down","FAM129C",199786,"","","0005543 // phospholipid binding // inferred from electronic annotation","chr19:17634109-17660620 (+) // 99.07 // p13.11"]
["11761732_at",-0.28357887,0.004825592,-0.004825592,-0.16068745,0.10310936,0.21834326,0.6795411,0.3698525,-1.1081204,-0.1481147,1.1081204,"down","PILRA",29992,"0007165 // signal transduction // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr7:99971150-99972732 (+) // 99.92 // q22.1"]
["11762481_at",-0.31970692,-0.07941437,0.12503147,-0.2211256,0.07941437,0.21963453,0.80551094,0.5559123,-1.0847313,-0.11733777,1.0847313,"down","LAMB4",22798,"0007155 // cell adhesion // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation","","chr7:107715982-107763640 (-) // 86.92 // q31.1"]
["11722116_a_at",-0.069417,0.13509941,0.23008871,-0.3588009,-0.14739561,0.069417,0.49013317,0.18334225,1.1844223,0.2441835,1.1844223,"up","RARB",5915,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0003417 // growth plate cartilage development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0021756 // striatum development // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from electronic annotation /// 0032331 // negative regulation of chondrocyte differentiation // inferred from electronic annotation /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043068 // positive regulation of programmed cell death // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048048 // embryonic eye morphogenesis // inferred from electronic annotation /// 0048384 // retinoic acid receptor signaling pathway // traceable author statement /// 0048384 // retinoic acid receptor signaling pathway // inferred from electronic annotation /// 0048384 // retinoic acid receptor signaling pathway // inferred from direct assay /// 0048566 // embryonic digestive tract development // inferred from mutant phenotype /// 0055012 // ventricular cardiac muscle cell differentiation // inferred from electronic annotation /// 0061037 // negative regulation of cartilage development // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0003708 // retinoic acid receptor activity // inferred from electronic annotation /// 0003708 // retinoic acid receptor activity // traceable author statement /// 0003708 // retinoic acid receptor activity // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:25469009-25639423 (+) // 95.75 // p24.2"]
["11737598_a_at",-0.20991087,-0.028534412,-0.047770977,0.039856434,0.06418753,0.028534412,0.31530333,0.07538786,-1.1015983,-0.13959819,1.1015983,"down","C17orf67",339210,"","0005576 // extracellular region // inferred from electronic annotation","","chr17:54869274-54911256 (-) // 82.48 // q22"]
["11728523_a_at",-0.19269037,0.11079836,-0.008736134,0.008736372,-0.028695107,0.055926323,0.8661631,0.6689507,-1.0296818,-0.042198576,1.0296818,"down","MYCL1",4610,"0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation","chr1:40361099-40367687 (-) // 97.97 // p34.2"]
["11728439_at",-0.11743355,0.05289507,0.34205723,-0.05289507,0.3340497,-0.054289818,0.97619915,0.9321184,1.0117723,0.016884612,1.0117723,"up","BRWD1",54014,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0008360 // regulation of cell shape // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","","chr21:40557818-40685556 (-) // 98.43 // q22.2"]
["11750366_a_at",-0.15368271,0.20756865,0.0035989285,-0.0035989285,-0.0640862,0.056571007,0.9446615,0.8457871,1.015976,0.022866255,1.015976,"up","EPHA6",285220,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0048013 // ephrin receptor signaling pathway // inferred from electronic annotation","0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005003 // ephrin receptor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr3:97158434-97356907 (+) // 95.38 // q11.2"]
["11760384_at",-0.015065193,-0.030474186,0.01506567,-0.06990433,0.20369148,0.27525187,0.55788946,0.23917933,-1.1068841,-0.1465042,1.1068841,"down","PPP2R5C",5527,"0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // inferred from direct assay /// 0007165 // signal transduction // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0016485 // protein processing // inferred from direct assay /// 0042771 // DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis // inferred from mutant phenotype /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from mutant phenotype","0000159 // protein phosphatase type 2A complex // inferred from direct assay /// 0000159 // protein phosphatase type 2A complex // inferred from electronic annotation /// 0000159 // protein phosphatase type 2A complex // non-traceable author statement /// 0000775 // chromosome, centromeric region // inferred from direct assay /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from direct assay /// 0008601 // protein phosphatase type 2A regulator activity // inferred from direct assay /// 0008601 // protein phosphatase type 2A regulator activity // inferred from electronic annotation /// 0008601 // protein phosphatase type 2A regulator activity // non-traceable author statement","chr14:102276167-102349570 (+) // 99.53 // q32.31"]
["11737444_a_at",-0.051650047,-0.24334574,-0.18840837,0.123281,0.074244976,0.051650047,0.14508842,0.015902596,-1.1844304,-0.24419338,1.1844304,"down","GPR156",165829,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004965 // G-protein coupled GABA receptor activity // inferred from electronic annotation","chr3:119885676-120004242 (-) // 97.27 // q13.33"]
["11723152_a_at",0.12957716,-0.02079916,0.020798683,0.21052885,-0.054189205,-0.17767286,0.88334584,0.70344967,1.0354826,0.050303373,1.0354826,"up","GON4L",54856,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation","chr1:155719507-155823598 (-) // 96.24 // q22"]
["11750968_x_at",0.17183018,-0.0074949265,-0.18623352,0.49046516,-0.014158249,0.0074949265,0.72720397,0.4349385,-1.1239413,-0.16856669,1.1239413,"down","NFIC",4782,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction /// 0006260 // DNA replication // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement","chr19:3381708-3463140 (+) // 92.67 // p13.3"]
["11741727_a_at",0.24466324,-0.04016781,0.0350523,0.079545975,-0.0350523,-0.19481182,0.6443662,0.32743528,1.0942597,0.12995522,1.0942597,"up","NEDD1",121441,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0000242 // pericentriolar material // inferred from electronic annotation /// 0000922 // spindle pole // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // inferred from electronic annotation /// 0005814 // centriole // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation","","chr12:97301243-97347461 (+) // 97.93 // q23.1"]
["11754840_s_at",0.15403628,-0.24465013,-0.08400869,-0.04782653,0.077587605,0.04782629,0.7889472,0.52812105,-1.0600042,-0.08407003,1.0600042,"down","LINC00470",56651,"","","","chr18:1268311-1276078 (-) // 58.43 // p11.32"]
["11757267_x_at",0.15346622,-0.019208908,-0.014492035,0.16680527,0.014492035,-0.07665157,0.98579675,0.95845705,1.0034995,0.0050399094,1.0034995,"up","SIRT2",22933,"0000183 // chromatin silencing at rDNA // non-traceable author statement /// 0006342 // chromatin silencing // non-traceable author statement /// 0006348 // chromatin silencing at telomere // non-traceable author statement /// 0006471 // protein ADP-ribosylation // non-traceable author statement /// 0006471 // protein ADP-ribosylation // traceable author statement /// 0006476 // protein deacetylation // inferred from direct assay /// 0006476 // protein deacetylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007096 // regulation of exit from mitosis // non-traceable author statement /// 0016458 // gene silencing // non-traceable author statement /// 0016575 // histone deacetylation // traceable author statement /// 0042325 // regulation of phosphorylation // non-traceable author statement /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0045843 // negative regulation of striated muscle tissue development // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation /// 0051775 // response to redox state // non-traceable author statement","0005677 // chromatin silencing complex // non-traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation","0003950 // NAD+ ADP-ribosyltransferase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016811 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides // inferred from electronic annotation /// 0017136 // NAD-dependent histone deacetylase activity // inferred from direct assay /// 0033558 // protein deacetylase activity // inferred from direct assay /// 0035035 // histone acetyltransferase binding // inferred from physical interaction /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0042903 // tubulin deacetylase activity // inferred from direct assay /// 0043130 // ubiquitin binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation /// 0070403 // NAD+ binding // inferred from direct assay /// 0070403 // NAD+ binding // inferred from electronic annotation","chr19:39369199-39369442 (-) // 35.79 // q13.2"]
["11730333_at",-0.050093174,0.030423164,-0.030423164,0.062464237,0.15510464,-0.039649487,0.60273653,0.28239965,-1.0540944,-0.07600412,1.0540944,"down","DPYSL4",10570,"0006208 // pyrimidine base catabolic process // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007411 // axon guidance // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0016787 // hydrolase activity // inferred from electronic annotation /// 0016810 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds // inferred from electronic annotation /// 0016812 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides // inferred from electronic annotation","chr10:134000403-134019280 (+) // 97.43 // q26.3"]
["11730717_x_at",0.05530858,0.22666192,0.08818364,-0.22567844,-0.05530858,-0.12526083,0.17435022,0.022992557,1.1964836,0.25880063,1.1964836,"up","PAGE5",90737,"","","","chrX:55246788-55250533 (+) // 87.59 // p11.21"]
["11718361_at",0.08755636,0.022321224,-0.02737999,0.04941368,-0.09158325,-0.022321224,0.70543236,0.40415084,1.0345448,0.048996158,1.0345448,"up","COIL",8161,"","0001674 // female germ cell nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0015030 // Cajal body // inferred from direct assay /// 0015030 // Cajal body // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0015036 // disulfide oxidoreductase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction","chr17:55015559-55038404 (-) // 97.19 // q22"]
["11735219_at",0.113281965,-0.14441228,0.10185909,0.017451525,-0.017451525,-0.06860733,0.8433462,0.62440515,1.0327173,0.046445444,1.0327173,"up","COL10A1",1300,"0001501 // skeletal system development // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005581 // collagen // traceable author statement /// 0005938 // cell cortex // inferred from electronic annotation","0046872 // metal ion binding // inferred from electronic annotation","chr6:116440084-116447296 (-) // 97.71 // q22.1"]
["11718052_a_at",0.06374693,-0.075577736,-0.13465977,0.14467716,0.18981838,-0.06374693,0.5451457,0.2279272,-1.1012025,-0.13907978,1.1012025,"down","TBC1D23",55773,"0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0005097 // Rab GTPase activator activity // inferred from electronic annotation","chr3:99979660-100044095 (+) // 96.18 // q12.1"]
["11749907_a_at",0.0462327,0.2039957,-0.17742491,-0.042862415,0.022185326,-0.022185326,0.90470886,0.7486498,1.0270848,0.03855534,1.0270848,"up","TRIM63",84676,"0007165 // signal transduction // non-traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005874 // microtubule // non-traceable author statement","0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0031432 // titin binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:26378141-26394121 (-) // 100.0 // p36.11"]
["11739616_x_at",0.06543064,-0.019046783,-0.10835886,0.09323025,-0.032788277,0.019046783,0.76457405,0.48985678,-1.033225,-0.04715454,1.033225,"down","CD3EAP",10849,"0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0009303 // rRNA transcription // inferred from electronic annotation /// 0009303 // rRNA transcription // traceable author statement","0000120 // RNA polymerase I transcription factor complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005730 // nucleolus // traceable author statement /// 0005736 // DNA-directed RNA polymerase I complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay","0003899 // DNA-directed RNA polymerase activity // inferred from electronic annotation","chr19:45909386-45955388 (+) // 71.15 // q13.32"]
["11737631_a_at",-0.16025281,0.08075309,0.07307267,-0.14052749,-0.07307267,0.083497286,0.8862543,0.71005046,1.0289874,0.041225325,1.0289874,"up","SLC26A7",115111,"0001696 // gastric acid secretion // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006820 // anion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from direct assay /// 0006821 // chloride transport // inferred from electronic annotation /// 0008272 // sulfate transport // inferred from direct assay /// 0008272 // sulfate transport // inferred from electronic annotation /// 0015701 // bicarbonate transport // inferred from sequence or structural similarity /// 0015701 // bicarbonate transport // inferred from electronic annotation /// 0019532 // oxalate transport // inferred from direct assay /// 0055085 // transmembrane transport // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from mutant phenotype /// 0016323 // basolateral plasma membrane // inferred from sequence or structural similarity /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from electronic annotation","0005253 // anion channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from direct assay /// 0005254 // chloride channel activity // inferred from electronic annotation /// 0015106 // bicarbonate transmembrane transporter activity // inferred from sequence or structural similarity /// 0015106 // bicarbonate transmembrane transporter activity // inferred from electronic annotation /// 0015116 // sulfate transmembrane transporter activity // inferred from direct assay /// 0015116 // sulfate transmembrane transporter activity // inferred from electronic annotation /// 0015301 // anion:anion antiporter activity // inferred from electronic annotation /// 0019531 // oxalate transmembrane transporter activity // inferred from direct assay","chr8:92261515-92406946 (+) // 99.4 // q21.3"]
["11723861_a_at",0.022280693,0.24202108,0.07504797,-0.022280693,-0.0899601,-0.11971712,0.27602398,0.05779116,1.1411084,0.19043584,1.1411084,"up","ATP8A1",10396,"0006812 // cation transport // inferred from electronic annotation /// 0015914 // phospholipid transport // inferred from electronic annotation /// 0015917 // aminophospholipid transport // non-traceable author statement /// 0034220 // ion transmembrane transport // traceable author statement /// 0045332 // phospholipid translocation // non-traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042584 // chromaffin granule membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004012 // phospholipid-translocating ATPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0015247 // aminophospholipid transporter activity // non-traceable author statement /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0019829 // cation-transporting ATPase activity // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:42410393-42659122 (-) // 99.5 // p13"]
["11733619_a_at",-0.045166016,0.045166016,0.16001797,-0.10292649,-0.06448221,0.07313323,0.66273135,0.3484624,1.0605146,0.084764436,1.0605146,"up","ACVR1C",130399,"0002021 // response to dietary excess // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred by curator /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007178 // transmembrane receptor protein serine/threonine kinase signaling pathway // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019915 // lipid storage // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from direct assay /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0038092 // nodal signaling pathway // inferred from mutant phenotype /// 0042981 // regulation of apoptotic process // inferred from direct assay /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0046676 // negative regulation of insulin secretion // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0048179 // activin receptor complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004675 // transmembrane receptor protein serine/threonine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005024 // transforming growth factor beta-activated receptor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016361 // activin receptor activity, type I // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred by curator /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:158383279-158485517 (-) // 93.9 // q24.1"]
["11716864_s_at",0.31693745,0.06282234,0.0065746307,-0.0065746307,-0.11215544,-0.21613741,0.36499164,0.100548014,1.1813207,0.24040063,1.1813207,"up","NISCH",11188,"0006006 // glucose metabolic process // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0016601 // Rac protein signal transduction // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0032228 // regulation of synaptic transmission, GABAergic // inferred from electronic annotation /// 0048243 // norepinephrine secretion // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005178 // integrin binding // inferred from electronic annotation /// 0008227 // G-protein coupled amine receptor activity // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr3:52489518-52527084 (+) // 90.72 // p21.1"]
["200062_PM_s_at",0.05364132,-0.059757233,-0.038456917,0.014451981,-0.00269413,0.0026950836,0.8329995,0.60564256,-1.0137312,-0.019675218,1.0137312,"down","RPL30",6156,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation","chr8:99053953-99057752 (-) // 98.74 // q22.2"]
["11740326_x_at",0.34527493,0.24550056,0.024335384,-0.41411352,-0.28424597,-0.024335384,0.22940563,0.040016368,1.3621969,0.44593528,1.3621969,"up","SORBS2",8470,"","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0030018 // Z disc // non-traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005200 // structural constituent of cytoskeleton // traceable author statement /// 0008093 // cytoskeletal adaptor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008307 // structural constituent of muscle // traceable author statement","chr4:186506597-186697679 (-) // 93.63 // q35.1"]
["11725830_a_at",0.27045584,0.2079382,0.029869556,-0.11025286,-0.029869556,-0.50602484,0.32212067,0.07865914,1.3056821,0.38480362,1.3056821,"up","PLCL2",23228,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0004435 // phosphatidylinositol phospholipase C activity // inferred from electronic annotation /// 0004629 // phospholipase C activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008081 // phosphoric diester hydrolase activity // inferred from electronic annotation","chr3:16926451-17132090 (+) // 97.8 // p24.3"]
["11726721_x_at",0.121834755,0.06706905,-0.05417919,-0.14755058,-0.021655083,0.021655083,0.5850652,0.26503703,1.0673932,0.094091706,1.0673932,"up","MPG",4350,"0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006284 // base-excision repair // inferred from electronic annotation /// 0006284 // base-excision repair // traceable author statement /// 0006285 // base-excision repair, AP site formation // traceable author statement /// 0006307 // DNA dealkylation involved in DNA repair // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0045007 // depurination // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003905 // alkylbase DNA N-glycosylase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008725 // DNA-3-methyladenine glycosylase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0043916 // DNA-7-methylguanine glycosylase activity // inferred from electronic annotation /// 0052821 // DNA-7-methyladenine glycosylase activity // inferred from electronic annotation /// 0052822 // DNA-3-methylguanine glycosylase activity // inferred from electronic annotation","chr16:128168-135837 (+) // 86.65 // p13.3"]
["11743357_a_at",-0.024324417,0.09714508,0.14536285,-0.06247902,0.024324417,-0.08372784,0.4202577,0.13349268,1.0817411,0.11335524,1.0817411,"up","ZBTB40",9923,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0030282 // bone mineralization // non-traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:22778343-22857647 (+) // 92.76 // p36.12"]
["11758895_at",0.0072155,0.14887524,-0.009809494,0.17882824,-0.027579308,-0.0072155,0.997455,0.99320674,1.0005195,0.00074930576,1.0005195,"up","EIF2S2",8894,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0002176 // male germ cell proliferation // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // traceable author statement /// 0006413 // translational initiation // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005829 // cytosol // traceable author statement /// 0005850 // eukaryotic translation initiation factor 2 complex // traceable author statement","0003723 // RNA binding // traceable author statement /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:32676110-32700084 (-) // 79.39 // q11.22"]
["11753852_a_at",-0.12666416,0.09060836,-0.18535757,-0.05447197,0.1680131,0.054472208,0.6065397,0.28669885,-1.0941488,-0.12980889,1.0941488,"down","NNAT",4826,"0006810 // transport // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007420 // brain development // traceable author statement /// 0009249 // protein lipoylation // traceable author statement /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0032880 // regulation of protein localization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","","chr20:36149733-36151159 (+) // 98.78 // q11.23"]
["11730804_s_at",0.03410244,-0.40729618,-0.3560171,0.2992792,0.17885399,-0.03410244,0.33116305,0.08298687,-1.3113753,-0.3910806,1.3113753,"down","PRPF38B",55119,"0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation","","chr1:109234913-109244745 (+) // 90.54 // p13.3"]
["11736428_at",0.07910299,0.121153355,0.3012352,-0.37208414,-0.09952164,-0.07910299,0.2277335,0.039475985,1.2752088,0.35073352,1.2752088,"up","STYX",6815,"0006470 // protein dephosphorylation // not recorded /// 0007283 // spermatogenesis // not recorded /// 0016311 // dephosphorylation // inferred from electronic annotation","0005737 // cytoplasm // not recorded","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // not recorded /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr14:53196877-53241703 (+) // 92.63 // q22.1"]
["11734349_a_at",0.040489197,0.0142297745,-0.042024612,-0.0077199936,0.0077199936,-0.030345917,0.841002,0.61993134,1.009994,0.014346765,1.009994,"up","TRIM11",81559,"0009615 // response to virus // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0050768 // negative regulation of neurogenesis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:228581378-228594541 (-) // 97.53 // q42.13"]
["11744180_a_at",0.45525742,-0.09992123,-0.22476768,0.4335184,0.01726532,-0.01726532,0.88669825,0.71155405,-1.0725042,-0.10098325,1.0725042,"down","TCIRG1",10312,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0006968 // cellular defense response // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // traceable author statement /// 0015992 // proton transport // inferred from electronic annotation /// 0033572 // transferrin transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0000220 // vacuolar proton-transporting V-type ATPase, V0 domain // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from direct assay /// 0033177 // proton-transporting two-sector ATPase complex, proton-transporting domain // inferred from electronic annotation","0005215 // transporter activity // traceable author statement /// 0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation","chr11:67806461-67818366 (+) // 95.4 // q13.2"]
["11753358_a_at",0.009717941,0.050322533,0.04740715,-0.13847828,-0.12324381,-0.009717941,0.23412724,0.041569002,1.0914876,0.1262958,1.0914876,"up","ACVR1",90,"0000082 // G1/S transition of mitotic cell cycle // inferred from mutant phenotype /// 0001569 // patterning of blood vessels // inferred from electronic annotation /// 0001655 // urogenital system development // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001702 // gastrulation with mouth forming second // inferred from electronic annotation /// 0001707 // mesoderm formation // inferred from electronic annotation /// 0001755 // neural crest cell migration // inferred from electronic annotation /// 0002526 // acute inflammatory response // inferred from electronic annotation /// 0003143 // embryonic heart tube morphogenesis // inferred from mutant phenotype /// 0003183 // mitral valve morphogenesis // inferred from mutant phenotype /// 0003197 // endocardial cushion development // inferred from mutant phenotype /// 0003289 // atrial septum primum morphogenesis // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007178 // transmembrane receptor protein serine/threonine kinase signaling pathway // inferred from reviewed computational analysis /// 0007178 // transmembrane receptor protein serine/threonine kinase signaling pathway // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0007281 // germ cell development // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0007369 // gastrulation // inferred from electronic annotation /// 0007498 // mesoderm development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0009968 // negative regulation of signal transduction // inferred from mutant phenotype /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018107 // peptidyl-threonine phosphorylation // inferred from direct assay /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation /// 0030278 // regulation of ossification // inferred from mutant phenotype /// 0030501 // positive regulation of bone mineralization // inferred from mutant phenotype /// 0030509 // BMP signaling pathway // inferred from direct assay /// 0032924 // activin receptor signaling pathway // inferred from direct assay /// 0032926 // negative regulation of activin receptor signaling pathway // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0045669 // positive regulation of osteoblast differentiation // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048641 // regulation of skeletal muscle tissue development // inferred from electronic annotation /// 0051145 // smooth muscle cell differentiation // inferred from electronic annotation /// 0060037 // pharyngeal system development // inferred from electronic annotation /// 0060389 // pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0060923 // cardiac muscle cell fate commitment // inferred from mutant phenotype /// 0071385 // cellular response to glucocorticoid stimulus // inferred from electronic annotation /// 2000017 // positive regulation of determination of dorsal identity // inferred from direct assay","0005887 // integral to plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation /// 0048179 // activin receptor complex // inferred from direct assay /// 0048179 // activin receptor complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004675 // transmembrane receptor protein serine/threonine kinase activity // inferred from reviewed computational analysis /// 0004675 // transmembrane receptor protein serine/threonine kinase activity // inferred from electronic annotation /// 0004702 // receptor signaling protein serine/threonine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005024 // transforming growth factor beta-activated receptor activity // inferred from electronic annotation /// 0005025 // transforming growth factor beta receptor activity, type I // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016361 // activin receptor activity, type I // inferred from direct assay /// 0016361 // activin receptor activity, type I // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046332 // SMAD binding // inferred from direct assay /// 0046332 // SMAD binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048185 // activin binding // inferred from direct assay /// 0048185 // activin binding // inferred from electronic annotation /// 0050431 // transforming growth factor beta binding // inferred from direct assay /// 0050431 // transforming growth factor beta binding // inferred from electronic annotation","chr2:158622578-158732342 (-) // 99.9 // q24.1"]
["11754542_x_at",-0.010708809,-0.12752962,0.28838348,0.01681137,0.010708809,-0.047882557,0.86934596,0.6742418,1.0401819,0.056835804,1.0401819,"up","ZNF594",84622,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:5082830-5095157 (-) // 81.09 // p13.2"]
["11736640_a_at",0.17238235,-0.055490494,-0.106723785,0.24506187,0.055490494,-0.16799545,0.9235288,0.79512656,-1.0286814,-0.04079622,1.0286814,"down","ESRP2",80004,"0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0043484 // regulation of RNA splicing // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from direct assay","chr16:68262449-68270487 (-) // 95.98 // q22.1"]
["11763281_s_at",-0.021225452,-0.03755617,-0.12976837,0.04401207,0.11426973,0.021225452,0.2545065,0.049025796,-1.0887598,-0.12268568,1.0887598,"down","RPL23AP7 /// RPL23AP82","118433 /// 284942","0006412 // translation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // inferred from electronic annotation","chr2:114367303-114384617 (-) // 33.97 // q13"]
["11737624_a_at",-0.2049017,-0.083414555,0.029226303,0.0003156662,-0.0003156662,0.0848217,0.5023046,0.1927662,-1.0827028,-0.11463722,1.0827028,"down","GAB2",9846,"0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from direct assay /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0016477 // cell migration // inferred from electronic annotation /// 0030316 // osteoclast differentiation // inferred from mutant phenotype /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043306 // positive regulation of mast cell degranulation // inferred from sequence or structural similarity /// 0048015 // phosphatidylinositol-mediated signaling // inferred from sequence or structural similarity","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0005068 // transmembrane receptor protein tyrosine kinase adaptor activity // inferred from direct assay /// 0005070 // SH3/SH2 adaptor activity // inferred from reviewed computational analysis /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0005547 // phosphatidylinositol-3,4,5-trisphosphate binding // inferred from sequence or structural similarity /// 0043325 // phosphatidylinositol-3,4-bisphosphate binding // inferred from sequence or structural similarity","chr11:77926341-78128862 (-) // 93.28 // q14.1"]
["11719362_at",0.14587975,-0.06833172,-0.055924892,0.23887253,0.055924892,-0.098036766,0.8574012,0.65099657,-1.0412953,-0.058379244,1.0412953,"down","FAM178A",55719,"","","","chr10:102672325-102724889 (+) // 98.28 // q24.31"]
["11730351_at",-0.007441044,0.007441044,-0.04544878,-0.0634017,0.19286394,0.0913291,0.6273325,0.30862173,-1.0634459,-0.088746674,1.0634459,"down","ANKRD52",283373,"","","","chr12:56631590-56652175 (-) // 98.74 // q13.3"]
["11718611_at",-0.23048592,0.115662575,0.08316088,-0.24437714,-0.021916866,0.021916866,0.84878105,0.63388366,1.0503753,0.070904955,1.0503753,"up","TP53INP1",94241,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006950 // response to stress // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0010508 // positive regulation of autophagy // inferred from mutant phenotype /// 0030336 // negative regulation of cell migration // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0048102 // autophagic cell death // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005776 // autophagic vacuole // inferred from direct assay /// 0005776 // autophagic vacuole // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0016605 // PML body // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0016209 // antioxidant activity // inferred from sequence or structural similarity /// 0016209 // antioxidant activity // inferred from electronic annotation","chr8:95938199-95961726 (-) // 92.51 // q22.1"]
["11739232_x_at",0.34959698,0.053509712,0.13313103,-0.053509712,-0.31333685,-0.35629034,0.2040633,0.03163008,1.3377342,0.41979152,1.3377342,"up","RASSF2",9770,"0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr20:4760668-4803050 (-) // 90.41 // p13"]
["AFFX-HSAC07/X00351_3_at",0.07229614,0.0024766922,-0.0024766922,0.06459522,-0.043105125,-0.055464745,0.75536597,0.47635692,1.0248576,0.035423525,1.0248576,"up",-0.0024766922,"ACTB /// ACTB /// LOC100505829","100505829 /// 60","0006457 // protein folding // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045214 // sarcomere organization // inferred from electronic annotation /// 0045216 // cell-cell junction organization // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0051592 // response to calcium ion // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0030016 // myofibril // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030863 // cortical cytoskeleton // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from electronic annotation /// 0035267 // NuA4 histone acetyltransferase complex // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0070688 // MLL5-L complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005200 // structural constituent of cytoskeleton // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0019894 // kinesin binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0030957 // Tat protein binding // inferred from physical interaction /// 0050998 // nitric-oxide synthase binding // inferred from physical interaction"]
["11728692_a_at",0.28741693,0.055399418,-0.05539894,0.05739069,-0.50957966,-0.33642197,0.43150216,0.14094232,1.2822487,0.35867614,1.2822487,"up","LOC728802 /// PDE4DIP","728802 /// 9659","0043623 // cellular protein complex assembly // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // inferred from sequence or structural similarity /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030016 // myofibril // inferred from sequence or structural similarity","0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from sequence or structural similarity","chr1:144890591-144932455 (-) // 99.45 // q21.1"]
["11742877_x_at",-0.113833904,-0.053167343,0.005976677,0.09782791,-0.005976677,0.073711395,0.32542697,0.080114186,-1.0783776,-0.10886244,1.0783776,"down","SGSM3",27352,"0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032483 // regulation of Rab protein signal transduction // inferred from expression pattern /// 0032486 // Rap protein signal transduction // inferred from expression pattern /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0045732 // positive regulation of protein catabolic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005921 // gap junction // inferred from electronic annotation","0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017137 // Rab GTPase binding // inferred from direct assay","chr22:40766588-40806289 (+) // 95.74 // q13.1"]
["11747293_a_at",0.073385715,-0.067135334,0.04540348,-0.045403242,-0.1061883,0.26412392,0.9565706,0.8763988,-1.0141653,-0.020292792,1.0141653,"down","CD1B",910,"0006955 // immune response // inferred from electronic annotation /// 0019882 // antigen processing and presentation // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr1:158300085-158301828 (-) // 95.85 // q23.1"]
["11742860_a_at",-0.0034034252,-0.011146069,-0.0381217,0.06028557,0.0034034252,0.0648582,0.2678313,0.054233193,-1.0427593,-0.06040618,1.0427593,"down","GPR116",221395,"0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement","chr6:46820246-46889742 (-) // 98.41 // p12.3"]
["11745498_a_at",0.10975933,0.03036499,-0.11471367,0.46201038,-0.030364513,-0.031977654,0.7840826,0.5198962,-1.0903207,-0.12475255,1.0903207,"down","IRF3",3661,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006917 // induction of apoptosis // traceable author statement /// 0006974 // response to DNA damage stimulus // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0009617 // response to bacterium // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from electronic annotation /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032727 // positive regulation of interferon-alpha production // inferred from sequence or structural similarity /// 0032728 // positive regulation of interferon-beta production // inferred from sequence or structural similarity /// 0032728 // positive regulation of interferon-beta production // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0039530 // MDA-5 signaling pathway // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0043330 // response to exogenous dsRNA // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0045351 // type I interferon biosynthetic process // inferred from electronic annotation /// 0045358 // negative regulation of interferon-beta biosynthetic process // inferred from electronic annotation /// 0050689 // negative regulation of defense response to virus by host // inferred from electronic annotation /// 0050715 // positive regulation of cytokine secretion // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from sequence or structural similarity /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement /// 0071359 // cellular response to dsRNA // inferred from electronic annotation /// 0071888 // macrophage apoptotic process // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // traceable author statement","0000975 // regulatory region DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003712 // transcription cofactor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation","chr19:50162904-50169116 (-) // 94.82 // q13.33"]
["11726129_at",-0.1428957,-0.022549152,0.08225155,-0.15563917,0.08508539,0.022549152,0.9675698,0.90969026,-1.0081635,-0.01172956,1.0081635,"down","HBZ",3050,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0015671 // oxygen transport // traceable author statement /// 0015671 // oxygen transport // inferred from electronic annotation /// 0043249 // erythrocyte maturation // inferred from electronic annotation","0005833 // hemoglobin complex // inferred from electronic annotation /// 0005833 // hemoglobin complex // traceable author statement","0005344 // oxygen transporter activity // inferred from electronic annotation /// 0005344 // oxygen transporter activity // traceable author statement /// 0005506 // iron ion binding // inferred from electronic annotation /// 0019825 // oxygen binding // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:202683-204505 (+) // 92.67 // p13.3"]
["11730174_at",-0.10064268,-0.16823292,0.027375221,0.008625507,0.027375221,-0.008625746,0.5103081,0.19898865,-1.0640936,-0.089625046,1.0640936,"down","C4orf3",401152,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr4:120217574-120222256 (-) // 56.88 // q26"]
["11715132_x_at",0.25876904,0.027583122,-0.027583122,0.28074932,-0.26443148,-0.12424803,0.7996719,0.5459365,1.0884182,0.12223305,1.0884182,"up","HIST1H2BH",8345,"0006334 // nucleosome assembly // non-traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation","0000786 // nucleosome // non-traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr6:26251878-26252303 (+) // 100.0 // p22.2"]
["11736997_a_at",0.14521885,0.04632187,-0.001065731,0.001065731,-0.09591055,-0.014037132,0.4156437,0.13056403,1.0716143,0.09978569,1.0716143,"up","MOSPD3",64598,"0007507 // heart development // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation","chr7:100209724-100212998 (+) // 95.52 // q22.1"]
["11721214_a_at",-0.09619522,-0.014795303,0.0022706985,0.12419987,0.1263218,-0.0022706985,0.33580288,0.08505221,-1.0859746,-0.118990324,1.0859746,"down","TMEM106B",54664,"","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","","chr7:12250847-12276890 (+) // 91.68 // p21.3"]
["11739333_at",-0.12464857,0.11055851,-0.20849752,0.18586802,0.07181215,-0.07181215,0.6411879,0.32396376,-1.0989699,-0.13615192,1.0989699,"down","SSTR2",6752,"0006937 // regulation of muscle contraction // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007187 // G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger // traceable author statement /// 0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007584 // response to nutrient // traceable author statement /// 0007586 // digestion // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0021549 // cerebellum development // inferred from electronic annotation /// 0030432 // peristalsis // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0038170 // somatostatin signaling pathway // traceable author statement /// 0038170 // somatostatin signaling pathway // inferred from electronic annotation /// 0042594 // response to starvation // inferred from electronic annotation /// 0071385 // cellular response to glucocorticoid stimulus // inferred from electronic annotation /// 0071392 // cellular response to estradiol stimulus // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004994 // somatostatin receptor activity // inferred from electronic annotation /// 0004994 // somatostatin receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0030165 // PDZ domain binding // inferred from physical interaction /// 0030165 // PDZ domain binding // inferred from electronic annotation","chr17:71161115-71168060 (+) // 82.39 // q25.1"]
["11741018_a_at",0.3538623,0.025118828,-0.045437813,0.36186218,-0.025118351,-0.1070385,0.9511899,0.8642069,1.0242817,0.0346126,1.0242817,"up","FAM65A",79567,"","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation","","chr16:67562716-67580688 (+) // 98.59 // q22.1"]
["11743968_a_at",0.06610298,0.003232956,0.017962456,-0.003232956,-0.06353569,-0.019931793,0.34714013,0.09077158,1.0410213,0.057999652,1.0410213,"up","CYBA",1535,"0001938 // positive regulation of endothelial cell proliferation // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0003106 // negative regulation of glomerular filtration by angiotensin // inferred from electronic annotation /// 0006801 // superoxide metabolic process // inferred from mutant phenotype /// 0006801 // superoxide metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from mutant phenotype /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0014895 // smooth muscle hypertrophy // inferred from sequence or structural similarity /// 0014895 // smooth muscle hypertrophy // inferred from electronic annotation /// 0017004 // cytochrome complex assembly // inferred from direct assay /// 0022900 // electron transport chain // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from electronic annotation /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042554 // superoxide anion generation // inferred from mutant phenotype /// 0042554 // superoxide anion generation // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0045087 // innate immune response // inferred from mutant phenotype /// 0045730 // respiratory burst // inferred from mutant phenotype /// 0050665 // hydrogen peroxide biosynthetic process // inferred from sequence or structural similarity /// 0050665 // hydrogen peroxide biosynthetic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070555 // response to interleukin-1 // inferred from electronic annotation /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from electronic annotation /// 0071310 // cellular response to organic substance // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0071356 // cellular response to tumor necrosis factor // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0071480 // cellular response to gamma radiation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030141 // secretory granule // traceable author statement /// 0030425 // dendrite // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0043020 // NADPH oxidase complex // inferred from direct assay /// 0043020 // NADPH oxidase complex // inferred from mutant phenotype /// 0043020 // NADPH oxidase complex // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0097038 // perinuclear endoplasmic reticulum // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0009055 // electron carrier activity // inferred from direct assay /// 0009055 // electron carrier activity // traceable author statement /// 0016175 // superoxide-generating NADPH oxidase activity // inferred from mutant phenotype /// 0016175 // superoxide-generating NADPH oxidase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from physical interaction /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from physical interaction","chr16:88709696-88717560 (-) // 63.95 // q24.3"]
["11736749_a_at",0.054599285,-0.05658102,-0.08174801,-0.054599285,0.1247344,0.30441332,0.5627602,0.24353778,-1.1116937,-0.15275939,1.1116937,"down","SLC22A9",114571,"0006810 // transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:63137154-63177710 (+) // 86.42 // q12.3"]
["11746592_s_at",0.34851265,-0.21429491,-0.29958868,0.54913664,-0.3484497,0.21429491,0.82551616,0.5908778,-1.1434957,-0.19345091,1.1434957,"down","LOC100288332 /// LOC100506193 /// LOC642778 /// LOC642799 /// NPIP /// NPIPL3 /// PKD1P1","100288332 /// 100506193 /// 23117 /// 339044 /// 642778 /// 642799 /// 9284","0001502 // cartilage condensation // inferred from electronic annotation /// 0001568 // blood vessel development // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from sequence or structural similarity /// 0001822 // kidney development // inferred from electronic annotation /// 0001822 // kidney development // inferred from sequence or structural similarity /// 0001892 // embryonic placenta development // inferred from electronic annotation /// 0001892 // embryonic placenta development // inferred from sequence or structural similarity /// 0006611 // protein export from nucleus // inferred from electronic annotation /// 0006611 // protein export from nucleus // inferred from sequence or structural similarity /// 0006810 // transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from sequence or structural similarity /// 0007156 // homophilic cell adhesion // traceable author statement /// 0007160 // cell-matrix adhesion // traceable author statement /// 0007161 // calcium-independent cell-matrix adhesion // traceable author statement /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007259 // JAK-STAT cascade // inferred from electronic annotation /// 0007259 // JAK-STAT cascade // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from electronic annotation /// 0007507 // heart development // inferred from expression pattern /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from sequence or structural similarity /// 0021510 // spinal cord development // inferred from expression pattern /// 0021915 // neural tube development // inferred from expression pattern /// 0031659 // positive regulation of cyclin-dependent protein kinase activity involved in G1/S // inferred from direct assay /// 0032092 // positive regulation of protein binding // inferred from electronic annotation /// 0032092 // positive regulation of protein binding // inferred from sequence or structural similarity /// 0042994 // cytoplasmic sequestering of transcription factor // inferred from electronic annotation /// 0042994 // cytoplasmic sequestering of transcription factor // inferred from sequence or structural similarity /// 0043588 // skin development // inferred from expression pattern /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048565 // digestive tract development // inferred from expression pattern /// 0048754 // branching morphogenesis of a tube // inferred from direct assay /// 0048806 // genitalia development // inferred from expression pattern /// 0050982 // detection of mechanical stimulus // inferred from electronic annotation /// 0050982 // detection of mechanical stimulus // inferred from sequence or structural similarity /// 0051028 // mRNA transport // inferred from electronic annotation /// 0051216 // cartilage development // inferred from expression pattern /// 0060428 // lung epithelium development // inferred from expression pattern /// 0060674 // placenta blood vessel development // inferred from electronic annotation /// 0060674 // placenta blood vessel development // inferred from sequence or structural similarity /// 0072164 // mesonephric tubule development // inferred from expression pattern /// 0072177 // mesonephric duct development // inferred from expression pattern /// 0072205 // metanephric collecting duct development // inferred from expression pattern /// 0072218 // metanephric ascending thin limb development // inferred from expression pattern /// 0072237 // metanephric proximal tubule development // inferred from expression pattern /// 0072287 // metanephric distal tubule morphogenesis // inferred from expression pattern","0002133 // polycystin complex // inferred from electronic annotation /// 0002133 // polycystin complex // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0005929 // cilium // inferred from electronic annotation /// 0005929 // cilium // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0031512 // motile primary cilium // inferred from electronic annotation /// 0031512 // motile primary cilium // inferred from sequence or structural similarity /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005261 // cation channel activity // inferred from electronic annotation /// 0005261 // cation channel activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0044325 // ion channel binding // inferred from physical interaction","chr16:70011367-70023987 (-) // 99.26 // q22.1"]
["11729410_a_at",0.08804822,-0.16121602,-0.004449129,0.004449129,0.058891773,-0.031686068,0.86325026,0.6623089,-1.0255686,-0.036424004,1.0255686,"down","ZNF415",55786,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:53611132-53636145 (-) // 91.41 // q13.42"]
["11721848_at",-0.024299622,-0.15690327,-0.18061781,0.19796467,0.024299622,0.25538826,0.19840847,0.0299392,-1.2140472,-0.2798245,1.2140472,"down","REEP2",51308,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr5:137774732-137782658 (+) // 92.04 // q31.2"]
["11761778_a_at",0.339561,-0.01944542,0.10259628,-0.09669399,0.01944542,-0.07166624,0.46149045,0.16160703,1.1411926,0.19054224,1.1411926,"up","WDR45",11152,"0000045 // autophagic vacuole assembly // not recorded","0005737 // cytoplasm // not recorded","0005083 // small GTPase regulator activity // inferred from electronic annotation /// 0032266 // phosphatidylinositol-3-phosphate binding // not recorded /// 0080025 // phosphatidylinositol-3,5-bisphosphate binding // not recorded","chrX:48934732-48937553 (-) // 74.25 // p11.23"]
["11731939_a_at",0.011332989,-0.05564642,-0.1775155,0.3081007,0.0035262108,-0.0035262108,0.5172077,0.20451446,-1.130251,-0.17664325,1.130251,"down","UCP3",7352,"0000303 // response to superoxide // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0006629 // lipid metabolic process // traceable author statement /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006839 // mitochondrial transport // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0007585 // respiratory gaseous exchange // traceable author statement /// 0009409 // response to cold // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0015992 // proton transport // traceable author statement /// 0015992 // proton transport // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0032870 // cellular response to hormone stimulus // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0048545 // response to steroid hormone stimulus // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation","0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","0005215 // transporter activity // traceable author statement /// 0017077 // oxidative phosphorylation uncoupler activity // inferred from electronic annotation","chr11:73711326-73720563 (-) // 92.25 // q13.4"]
["11743553_a_at",0.07704878,-0.07724333,-0.057732582,0.00040197372,-0.0004014969,0.010966301,0.8628181,0.6614677,-1.0160452,-0.0229646,1.0160452,"down","KIN",22944,"0006260 // DNA replication // inferred from direct assay /// 0006260 // DNA replication // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from expression pattern /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from direct assay","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from sequence or structural similarity /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:7797191-7829935 (-) // 76.66 // p14"]
["11758285_s_at",-0.08728409,0.048791885,0.053951263,0.01553154,-0.02550888,-0.01553154,0.92123693,0.7895773,1.0095105,0.013655941,1.0095105,"up","GTF3C1",2975,"0006351 // transcription, DNA-dependent // inferred by curator /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006383 // transcription from RNA polymerase III promoter // inferred by curator /// 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0009303 // rRNA transcription // traceable author statement /// 0009304 // tRNA transcription // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0042791 // 5S class rRNA transcription from RNA polymerase III type 1 promoter // inferred by curator /// 0042797 // tRNA transcription from RNA polymerase III promoter // inferred by curator","0000127 // transcription factor TFIIIC complex // inferred from direct assay /// 0000127 // transcription factor TFIIIC complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003677 // DNA binding // inferred by curator /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr16:27471776-27472301 (-) // 89.74 // p12.1"]
["11757037_s_at",-0.104242325,-0.16351986,-0.18544865,0.21122837,0.15104866,0.104242325,0.04868011,0.0014615367,-1.2367696,-0.3065767,1.2367696,"down","H3F3A /// H3F3B","3020 /// 3021","0006334 // nucleosome assembly // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement","0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr17:73774152-73775853 (-) // 99.82 // q25.1"]
["11724973_a_at",-0.07454896,0.3271637,0.11505365,0.015824795,-0.04252839,-0.015824795,0.6273232,0.30831927,1.0994121,0.13673224,1.0994121,"up","MYRIP",25924,"0006886 // intracellular protein transport // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from sequence or structural similarity","0001750 // photoreceptor outer segment // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from electronic annotation /// 0031045 // dense core granule // inferred from sequence or structural similarity /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // non-traceable author statement /// 0017022 // myosin binding // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:39850913-40301812 (+) // 93.45 // p22.1"]
["11730180_s_at",-0.18194246,-0.026760578,-0.00046539307,0.38659668,0.3540411,0.00046539307,0.3256353,0.080316685,-1.2455277,-0.31675714,1.2455277,"down","KDSR",2531,"0006665 // sphingolipid metabolic process // traceable author statement /// 0006665 // sphingolipid metabolic process // inferred from electronic annotation /// 0006666 // 3-keto-sphinganine metabolic process // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0030148 // sphingolipid biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005615 // extracellular space // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0047560 // 3-dehydrosphinganine reductase activity // inferred from direct assay /// 0047560 // 3-dehydrosphinganine reductase activity // inferred from electronic annotation","chr18:60994807-61034516 (-) // 81.73 // q21.33"]
["11724053_a_at",0.5446458,0.010251045,-0.016617775,0.14968109,-0.017943382,-0.010251045,0.776125,0.50678897,1.1010888,0.13893077,1.1010888,"up","FGFRL1",53834,"0001501 // skeletal system development // inferred from electronic annotation /// 0001558 // regulation of cell growth // non-traceable author statement /// 0003179 // heart valve morphogenesis // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0060412 // ventricular septum morphogenesis // inferred from electronic annotation /// 0060539 // diaphragm development // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from direct assay /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from electronic annotation /// 0008201 // heparin binding // inferred from direct assay /// 0017134 // fibroblast growth factor binding // inferred from electronic annotation","chr4:1006240-1020686 (+) // 75.49 // p16.3"]
["11741696_x_at",0.074710846,-0.04351139,-0.1256113,0.23648167,0.004058838,-0.004058838,0.64078724,0.3232443,-1.0794511,-0.110297866,1.0794511,"down","NSUN5P1",155400,"","","","chr7:75039645-75046065 (+) // 100.0 // q11.23 /// chr7:72418837-72425261 (-) // 98.71 // q11.23 /// chr7:72717226-72722792 (-) // 96.34 // q11.23"]
["11751535_s_at",0.16820002,-0.10063052,0.04397583,-0.14317536,-0.030500412,0.030500412,0.7108481,0.41223288,1.0606192,0.08490682,1.0606192,"up","CA3",761,"0006730 // one-carbon metabolic process // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0004089 // carbonate dehydratase activity // inferred from electronic annotation /// 0004089 // carbonate dehydratase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016151 // nickel cation binding // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:86351086-86360746 (+) // 99.91 // q21.2"]
["11716209_a_at",-0.031791687,-0.13938332,-0.28964138,0.26646137,0.03977108,0.031791687,0.29946306,0.06805743,-1.2027028,-0.26628014,1.2027028,"down","VPS28",51160,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral reproduction // traceable author statement /// 0016044 // cellular membrane organization // traceable author statement /// 0016197 // endosomal transport // traceable author statement /// 0031397 // negative regulation of protein ubiquitination // inferred from direct assay /// 0046788 // egress of virus within host cell // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr8:145649000-145653895 (-) // 69.48 // q24.3"]
["11734043_at",-0.09186578,0.22873163,0.3805654,-0.05720806,0.0041151047,-0.0041148663,0.5639816,0.24466728,1.1419871,0.19154634,1.1419871,"up","KIAA0408 /// SOGA3","387104 /// 9729","","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr6:127761734-127840792 (-) // 96.66 // q22.33"]
["11762934_at",-0.09923577,0.13529372,0.19269896,-0.059675932,-0.12554622,0.059675932,0.63894135,0.3214283,1.0853053,0.11810098,1.0853053,"up","CD300LG",146894,"","0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0032585 // multivesicular body membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr17:41924523-41935518 (+) // 75.83 // q21.31"]
["11737888_a_at",-0.085333586,0.13656807,0.00039172173,-0.22728157,-0.0003914833,0.21825075,0.962677,0.89440507,1.0142051,0.020349432,1.0142051,"up","HRH4",59340,"0006954 // inflammatory response // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004969 // histamine receptor activity // non-traceable author statement /// 0004969 // histamine receptor activity // inferred from electronic annotation","chr18:22040592-22059920 (+) // 59.72 // q11.2"]
["11718294_s_at",0.14270973,-0.02325058,-0.058405876,0.14751434,0.02325058,-0.035452843,0.91629064,0.7782911,-1.0173055,-0.02475298,1.0173055,"down","NME1-NME2 /// NME2","4831 /// 654364","0002762 // negative regulation of myeloid leukocyte differentiation // inferred from electronic annotation /// 0006165 // nucleoside diphosphate phosphorylation // inferred from direct assay /// 0006165 // nucleoside diphosphate phosphorylation // inferred from electronic annotation /// 0006183 // GTP biosynthetic process // inferred from electronic annotation /// 0006228 // UTP biosynthetic process // inferred from electronic annotation /// 0006241 // CTP biosynthetic process // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0009117 // nucleotide metabolic process // inferred from electronic annotation /// 0009142 // nucleoside triphosphate biosynthetic process // inferred from direct assay /// 0015949 // nucleobase-containing small molecule interconversion // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030879 // mammary gland development // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043388 // positive regulation of DNA binding // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0045618 // positive regulation of keratinocyte differentiation // inferred from mutant phenotype /// 0045682 // regulation of epidermis development // inferred from mutant phenotype /// 0050679 // positive regulation of epithelial cell proliferation // inferred from mutant phenotype /// 0051591 // response to cAMP // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement","0001726 // ruffle // inferred from direct assay /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005813 // centrosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005882 // intermediate filament // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0004536 // deoxyribonuclease activity // inferred from direct assay /// 0004550 // nucleoside diphosphate kinase activity // inferred from electronic annotation /// 0004550 // nucleoside diphosphate kinase activity // inferred from direct assay /// 0004673 // protein histidine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0043015 // gamma-tubulin binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:49230925-49249104 (+) // 72.48 // q21.33"]
["11743861_a_at",0.14605331,-0.10617924,-0.04164028,0.11621475,-0.010633469,0.010633469,0.8660484,0.66841507,-1.0276344,-0.039327066,1.0276344,"down","NIPSNAP3A",25934,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr9:107509870-107522400 (+) // 96.54 // q31.1"]
["11715832_s_at",0.057016373,0.0061454773,-0.0061454773,0.04630661,-0.015284538,-0.115798,0.7074617,0.4068986,1.0333035,0.047264062,1.0333035,"up","SURF4",6836,"0007030 // Golgi organization // inferred from mutant phenotype /// 0010638 // positive regulation of organelle organization // inferred from mutant phenotype /// 0032527 // protein exit from endoplasmic reticulum // inferred from mutant phenotype /// 0034498 // early endosome to Golgi transport // inferred from mutant phenotype","0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr9:136228335-136243000 (-) // 95.94 // q34.2"]
["11730835_a_at",-0.0014600754,-0.035502434,0.0026464462,0.0014600754,0.0851593,-0.011111259,0.6409778,0.32355785,-1.0256995,-0.03660812,1.0256995,"down","MTX2",10651,"0006626 // protein targeting to mitochondrion // inferred from electronic annotation /// 0006626 // protein targeting to mitochondrion // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006839 // mitochondrial transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","","chr2:177134143-177202751 (+) // 97.76 // q31.1"]
["11723092_at",0.15817833,0.13885641,0.15276194,-0.13885593,-0.1618762,-0.354908,0.08991102,0.0058459905,1.290991,0.3684789,1.290991,"up","FNIP2",57600,"0001932 // regulation of protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0008630 // DNA damage response, signal transduction resulting in induction of apoptosis // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr4:159690165-159828201 (+) // 97.59 // q32.1"]
["11725177_at",-0.022154331,0.09838486,0.022154331,-0.4663763,-0.1984582,0.05338812,0.5110006,0.19956902,1.1782212,0.23661044,1.1782212,"up","KCTD11",147040,"0007049 // cell cycle // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0040008 // regulation of growth // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","","chr17:7255207-7258263 (+) // 94.51 // p13.1"]
["11762768_at",-0.29909635,0.2320466,0.12471247,0.013384342,-0.17105818,-0.013384342,0.8719312,0.6805898,1.054267,0.07624035,1.054267,"up","ZNF215",7762,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:6953416-6977013 (+) // 62.35 // p15.4"]
["11743965_s_at",0.68306017,0.085837364,-0.085837364,0.29604292,-0.4108677,-0.53600407,0.5905722,0.27096137,1.3609648,0.44462973,1.3609648,"up","CERCAM /// LOC100506065","100506065 /// 51148","0006928 // cellular component movement // traceable author statement /// 0007155 // cell adhesion // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007159 // leukocyte cell-cell adhesion // traceable author statement /// 0009103 // lipopolysaccharide biosynthetic process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation /// 0005886 // plasma membrane // non-traceable author statement","","chr9:131182759-131199628 (+) // 92.03 // q34.11"]
["11741324_s_at",0.31525183,0.016570091,-0.7845905,0.30240393,-0.016570091,-0.29840517,0.8874773,0.71294636,-1.1070592,-0.14673242,1.1070592,"down","TRIM51 /// TRIM51EP /// TRIM51GP /// TRIM51HP","120824 /// 399940 /// 440041 /// 84767","","0005622 // intracellular // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:55650772-55659282 (+) // 98.6 // q11 /// chr11:89586007-89596233 (+) // 95.63 // q14.3 /// chr11:89714612-89724840 (-) // 95.51 // q14.3 /// chr11:55059364-55067885 (-) // 95.33 // q11"]
["11735795_at",0.016293526,-0.16050053,-0.28362703,0.01019001,-0.01019001,0.121780396,0.4144124,0.12963933,-1.1354033,-0.1832048,1.1354033,"down","GPSM1",26086,"0007165 // signal transduction // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0001965 // G-protein alpha-subunit binding // inferred from electronic annotation /// 0005092 // GDP-dissociation inhibitor activity // inferred from electronic annotation /// 0030695 // GTPase regulator activity // inferred from electronic annotation","chr9:139221931-139236801 (+) // 86.97 // q34.3"]
["11741004_a_at",-0.07378721,0.04229784,-0.04229784,-0.13552952,0.07202196,0.24097538,0.77456653,0.50420916,-1.0597703,-0.08375166,1.0597703,"down","ALS2CR8",79800,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation","0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation","chr2:203776940-203851060 (+) // 91.59 // q33.2"]
["11763798_a_at",0.0010323524,0.007499218,-0.20544243,-0.029246807,-0.0010323524,0.02394867,0.71993124,0.4250502,-1.0450172,-0.06352674,1.0450172,"down","STMN4",81551,"0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","","chr8:27096856-27115921 (-) // 99.84 // p21.2"]
["11731992_x_at",0.34659863,0.20873737,0.06953907,-0.06953907,-0.15490723,-0.2581911,0.15775812,0.018883763,1.2916102,0.36917078,1.2916102,"up","TROAP",10024,"0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr12:49716970-49718160 (+) // 76.39 // q13.12"]
["11732719_at",-0.025339842,0.025339842,0.18125463,-0.16600943,0.082074404,-0.15470195,0.5611297,0.24194735,1.1018776,0.13996394,1.1018776,"up","EREG",2069,"0001525 // angiogenesis // inferred from electronic annotation /// 0001550 // ovarian cumulus expansion // inferred from sequence or structural similarity /// 0001550 // ovarian cumulus expansion // inferred from electronic annotation /// 0001556 // oocyte maturation // inferred from sequence or structural similarity /// 0001556 // oocyte maturation // inferred from electronic annotation /// 0001819 // positive regulation of cytokine production // inferred from sequence or structural similarity /// 0001819 // positive regulation of cytokine production // inferred from electronic annotation /// 0007143 // female meiosis // inferred from sequence or structural similarity /// 0007143 // female meiosis // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from electronic annotation /// 0007267 // cell-cell signaling // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from sequence or structural similarity /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009299 // mRNA transcription // inferred from direct assay /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0009887 // organ morphogenesis // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // traceable author statement /// 0030728 // ovulation // inferred from sequence or structural similarity /// 0030728 // ovulation // inferred from electronic annotation /// 0042060 // wound healing // traceable author statement /// 0042108 // positive regulation of cytokine biosynthetic process // inferred from direct assay /// 0042327 // positive regulation of phosphorylation // inferred from direct assay /// 0042327 // positive regulation of phosphorylation // inferred from sequence or structural similarity /// 0042327 // positive regulation of phosphorylation // inferred from electronic annotation /// 0042700 // luteinizing hormone signaling pathway // inferred from sequence or structural similarity /// 0042700 // luteinizing hormone signaling pathway // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0043616 // keratinocyte proliferation // inferred from direct assay /// 0045089 // positive regulation of innate immune response // inferred from sequence or structural similarity /// 0045089 // positive regulation of innate immune response // inferred from electronic annotation /// 0045410 // positive regulation of interleukin-6 biosynthetic process // inferred from sequence or structural similarity /// 0045410 // positive regulation of interleukin-6 biosynthetic process // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from direct assay /// 0045740 // positive regulation of DNA replication // inferred from sequence or structural similarity /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0045741 // positive regulation of epidermal growth factor-activated receptor activity // inferred from sequence or structural similarity /// 0045741 // positive regulation of epidermal growth factor-activated receptor activity // inferred from electronic annotation /// 0045840 // positive regulation of mitosis // inferred from sequence or structural similarity /// 0045840 // positive regulation of mitosis // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0048146 // positive regulation of fibroblast proliferation // inferred from direct assay /// 0048160 // primary follicle stage // inferred from sequence or structural similarity /// 0048160 // primary follicle stage // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from sequence or structural similarity /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050680 // negative regulation of epithelial cell proliferation // traceable author statement /// 0051151 // negative regulation of smooth muscle cell differentiation // inferred from direct assay /// 0051781 // positive regulation of cell division // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005154 // epidermal growth factor receptor binding // inferred from sequence or structural similarity /// 0005154 // epidermal growth factor receptor binding // traceable author statement /// 0005154 // epidermal growth factor receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation","chr4:75230859-75254477 (+) // 83.41 // q13.3"]
["11740723_x_at",-0.14609098,-0.21633816,-0.09715223,0.13580036,0.09715223,0.19449139,0.063843556,0.00270579,-1.2274592,-0.29567507,1.2274592,"down","LGALS9B /// LGALS9C","284194 /// 654346","","","0030246 // carbohydrate binding // inferred from electronic annotation","chr17:18380101-18398173 (+) // 94.88 // p11.2 /// chr17:20352793-20370848 (-) // 95.06 // p11.2"]
["11751552_at",-0.11034775,0.026364326,0.048293114,-0.3851595,-0.026364326,0.14749002,0.8655458,0.66760665,1.0541751,0.07611457,1.0541751,"up","RNF223",401934,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:1007125-1009687 (-) // 95.1 // p36.33"]
["11734940_a_at",-0.30430555,-0.34558725,-0.16210842,0.16210842,0.3038187,0.20946455,0.05609359,0.0020361536,-1.4101001,-0.49579757,1.4101001,"down","SLC16A9",220963,"0006810 // transport // inferred from electronic annotation /// 0046415 // urate metabolic process // inferred from mutant phenotype /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0015293 // symporter activity // inferred from electronic annotation","chr10:61410522-61469837 (-) // 91.24 // q21.2"]
["11755071_a_at",0.41693974,0.105811596,0.34534693,-0.32280254,-0.105811596,-0.14709091,0.13591604,0.013953189,1.3959699,0.48126778,1.3959699,"up","HMCN1",83872,"0007596 // blood coagulation // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031012 // extracellular matrix // traceable author statement","0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation","chr1:186097341-186160079 (+) // 96.21 // q31.1"]
["11759789_x_at",-0.21134615,-0.115653515,0.044789076,0.08285475,-0.044789314,0.1173501,0.4838868,0.17856643,-1.1064018,-0.14587541,1.1064018,"down","NLGN4Y",22829,"0007155 // cell adhesion // inferred from electronic annotation /// 0007416 // synapse assembly // not recorded","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // not recorded /// 0009986 // cell surface // not recorded /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // not recorded /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004091 // carboxylesterase activity // not recorded /// 0004872 // receptor activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0042043 // neurexin family protein binding // not recorded","chrY:16734097-16845419 (+) // 80.05 // q11.221"]
["11750395_a_at",-0.037877083,-0.32281017,-0.2932167,0.34504843,0.06311798,0.037877083,0.26128483,0.051775604,-1.2893547,-0.36664918,1.2893547,"down","GLI2",2736,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0001501 // skeletal system development // inferred from electronic annotation /// 0001501 // skeletal system development // inferred from sequence or structural similarity /// 0001649 // osteoblast differentiation // inferred from direct assay /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001822 // kidney development // inferred from sequence or structural similarity /// 0002009 // morphogenesis of an epithelium // inferred from electronic annotation /// 0002076 // osteoblast development // inferred from electronic annotation /// 0002076 // osteoblast development // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007224 // smoothened signaling pathway // inferred from direct assay /// 0007224 // smoothened signaling pathway // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from sequence or structural similarity /// 0007389 // pattern specification process // inferred from electronic annotation /// 0007411 // axon guidance // inferred from electronic annotation /// 0007411 // axon guidance // inferred from sequence or structural similarity /// 0007418 // ventral midline development // inferred from sequence or structural similarity /// 0007418 // ventral midline development // inferred from electronic annotation /// 0007442 // hindgut morphogenesis // inferred from electronic annotation /// 0007442 // hindgut morphogenesis // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from electronic annotation /// 0007507 // heart development // inferred from sequence or structural similarity /// 0008283 // cell proliferation // inferred from direct assay /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008589 // regulation of smoothened signaling pathway // inferred from electronic annotation /// 0009913 // epidermal cell differentiation // inferred from direct assay /// 0009953 // dorsal/ventral pattern formation // inferred from electronic annotation /// 0009954 // proximal/distal pattern formation // inferred from sequence or structural similarity /// 0021508 // floor plate formation // inferred from electronic annotation /// 0021508 // floor plate formation // inferred from sequence or structural similarity /// 0021513 // spinal cord dorsal/ventral patterning // inferred from sequence or structural similarity /// 0021513 // spinal cord dorsal/ventral patterning // inferred from electronic annotation /// 0021517 // ventral spinal cord development // inferred from sequence or structural similarity /// 0021517 // ventral spinal cord development // inferred from electronic annotation /// 0021696 // cerebellar cortex morphogenesis // inferred from electronic annotation /// 0021696 // cerebellar cortex morphogenesis // inferred from sequence or structural similarity /// 0021775 // smoothened signaling pathway involved in ventral spinal cord interneuron specification // inferred from electronic annotation /// 0021775 // smoothened signaling pathway involved in ventral spinal cord interneuron specification // inferred from sequence or structural similarity /// 0021776 // smoothened signaling pathway involved in spinal cord motor neuron cell fate specification // inferred from electronic annotation /// 0021904 // dorsal/ventral neural tube patterning // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0021938 // smoothened signaling pathway involved in regulation of cerebellar granule cell precursor cell proliferation // inferred from electronic annotation /// 0021965 // spinal cord ventral commissure morphogenesis // inferred from electronic annotation /// 0021965 // spinal cord ventral commissure morphogenesis // inferred from sequence or structural similarity /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030324 // lung development // inferred from sequence or structural similarity /// 0030879 // mammary gland development // inferred from sequence or structural similarity /// 0030879 // mammary gland development // inferred from electronic annotation /// 0030902 // hindbrain development // inferred from sequence or structural similarity /// 0030902 // hindbrain development // inferred from electronic annotation /// 0032331 // negative regulation of chondrocyte differentiation // inferred from electronic annotation /// 0033089 // positive regulation of T cell differentiation in thymus // inferred from sequence or structural similarity /// 0035295 // tube development // inferred from sequence or structural similarity /// 0035295 // tube development // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from sequence or structural similarity /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048566 // embryonic digestive tract development // inferred from electronic annotation /// 0048566 // embryonic digestive tract development // inferred from sequence or structural similarity /// 0048589 // developmental growth // inferred from electronic annotation /// 0048589 // developmental growth // inferred from sequence or structural similarity /// 0048646 // anatomical structure formation involved in morphogenesis // inferred from electronic annotation /// 0048666 // neuron development // inferred from sequence or structural similarity /// 0048666 // neuron development // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from sequence or structural similarity /// 0048856 // anatomical structure development // inferred from electronic annotation /// 0060032 // notochord regression // inferred from electronic annotation /// 0060322 // head development // inferred from electronic annotation /// 0060513 // prostatic bud formation // inferred from electronic annotation /// 0060603 // mammary gland duct morphogenesis // inferred from electronic annotation /// 0060831 // smoothened signaling pathway involved in dorsal/ventral neural tube patterning // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0090103 // cochlea morphogenesis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0031512 // motile primary cilium // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:121554871-121748562 (+) // 99.96 // q14.2"]
["11738202_x_at",0.37179852,0.25683117,0.071588516,-0.071588516,-0.21625519,-0.16748714,0.14849779,0.016655082,1.3060255,0.38518307,1.3060255,"up","DAXX",1616,"0000281 // cytokinesis after mitosis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from sequence or structural similarity /// 0007257 // activation of JUN kinase activity // traceable author statement /// 0008625 // induction of apoptosis via death domain receptors // traceable author statement /// 0030521 // androgen receptor signaling pathway // inferred from direct assay /// 0031396 // regulation of protein ubiquitination // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from mutant phenotype /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005938 // cell cortex // inferred from electronic annotation /// 0016605 // PML body // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation /// 0016605 // PML body // traceable author statement /// 0043005 // neuron projection // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation","0002039 // p53 binding // inferred from physical interaction /// 0005057 // receptor signaling protein activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from direct assay /// 0019899 // enzyme binding // inferred from physical interaction /// 0031072 // heat shock protein binding // traceable author statement /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0050681 // androgen receptor binding // inferred from physical interaction","chr6:33286335-33290793 (-) // 94.47 // p21.32"]
["11721048_s_at",0.07304716,-0.10456276,-0.13060951,0.079426765,0.040870667,-0.04087019,0.6494224,0.3328561,-1.0573972,-0.08051747,1.0573972,"down","N6AMT2",221143,"0032259 // methylation // inferred from electronic annotation","","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr13:21302638-21348057 (-) // 88.65 // q12.11"]
["11725050_a_at",-0.16205883,-0.11109495,-0.040171146,0.1455884,0.08462,0.040171623,0.13662899,0.014093019,-1.1443816,-0.19456826,1.1443816,"down","FAIM2",23017,"0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // non-traceable author statement /// 0007417 // central nervous system development // inferred from electronic annotation /// 0021549 // cerebellum development // inferred from sequence or structural similarity /// 0021549 // cerebellum development // inferred from electronic annotation /// 0021680 // cerebellar Purkinje cell layer development // inferred from sequence or structural similarity /// 0021680 // cerebellar Purkinje cell layer development // inferred from electronic annotation /// 0021681 // cerebellar granular layer development // inferred from sequence or structural similarity /// 0021681 // cerebellar granular layer development // inferred from electronic annotation /// 0021702 // cerebellar Purkinje cell differentiation // inferred from sequence or structural similarity /// 0021702 // cerebellar Purkinje cell differentiation // inferred from electronic annotation /// 0043523 // regulation of neuron apoptotic process // inferred from mutant phenotype /// 0043523 // regulation of neuron apoptotic process // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay /// 0045121 // membrane raft // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","","chr12:50260679-50298000 (-) // 94.11 // q13.12"]
["11754927_x_at",0.22032166,0.16139746,-0.12500238,-0.17653275,-0.041047573,0.041047573,0.62771934,0.30919993,1.1052835,0.14441645,1.1052835,"up","PRKACB",5567,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006629 // lipid metabolic process // traceable author statement /// 0006833 // water transport // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007243 // intracellular protein kinase cascade // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019433 // triglyceride catabolic process // traceable author statement /// 0034199 // activation of protein kinase A activity // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0071377 // cellular response to glucagon stimulus // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005952 // cAMP-dependent protein kinase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004691 // cAMP-dependent protein kinase activity // inferred from direct assay /// 0004691 // cAMP-dependent protein kinase activity // inferred from electronic annotation /// 0004691 // cAMP-dependent protein kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from direct assay","chr1:84630322-84670977 (+) // 93.82 // p31.1"]
["11733355_x_at",0.35994005,-0.2721486,0.1947937,0.13488007,-0.13488007,-0.2442069,0.75133365,0.4699669,1.129432,0.17559737,1.129432,"up","C5AR1",728,"0000187 // activation of MAPK activity // traceable author statement /// 0006935 // chemotaxis // traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0006968 // cellular defense response // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007204 // elevation of cytosolic calcium ion concentration // traceable author statement /// 0007606 // sensory perception of chemical stimulus // traceable author statement /// 0030593 // neutrophil chemotaxis // inferred from electronic annotation /// 0032494 // response to peptidoglycan // inferred from electronic annotation /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004942 // anaphylatoxin receptor activity // inferred from electronic annotation /// 0004944 // C5a anaphylatoxin receptor activity // inferred from electronic annotation /// 0004944 // C5a anaphylatoxin receptor activity // traceable author statement","chr19:47813074-47825323 (+) // 71.91 // q13.32"]
["11721523_s_at",-0.02243042,-0.09562206,-0.07959843,0.048098564,0.02243042,0.050733566,0.1231252,0.01139148,-1.0764673,-0.10630446,1.0764673,"down","ZNF706",51123,"","0005622 // intracellular // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:102209271-102217960 (-) // 97.31 // q22.3"]
["11743114_at",-0.006082535,0.004711151,-0.004711151,0.2259016,-0.041557312,0.045630455,0.6830291,0.37465996,-1.0560555,-0.078685716,1.0560555,"down","DHX15",1665,"0006397 // mRNA processing // inferred from electronic annotation /// 0006397 // mRNA processing // traceable author statement /// 0008380 // RNA splicing // inferred by curator /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005689 // U12-type spliceosomal complex // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003724 // RNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr4:24529097-24586226 (-) // 96.31 // p15.2"]
["11722186_a_at",0.30978298,0.18925285,0.04989052,-0.084080696,-0.23669338,-0.04989052,0.20403516,0.03159432,1.2367297,0.30653027,1.2367297,"up","AKT1",207,"0000060 // protein import into nucleus, translocation // inferred from mutant phenotype /// 0001893 // maternal placenta development // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0005978 // glycogen biosynthetic process // inferred from electronic annotation /// 0005979 // regulation of glycogen biosynthetic process // inferred from mutant phenotype /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006412 // translation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006464 // cellular protein modification process // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // inferred from mutant phenotype /// 0006469 // negative regulation of protein kinase activity // inferred from sequence or structural similarity /// 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0006809 // nitric oxide biosynthetic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006924 // activation-induced cell death of T cells // inferred from mutant phenotype /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007281 // germ cell development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from mutant phenotype /// 0008286 // insulin receptor signaling pathway // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0008637 // apoptotic mitochondrial changes // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0009408 // response to heat // traceable author statement /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010748 // negative regulation of plasma membrane long-chain fatty acid transport // inferred from mutant phenotype /// 0010765 // positive regulation of sodium ion transport // inferred from electronic annotation /// 0010907 // positive regulation of glucose metabolic process // inferred from mutant phenotype /// 0010975 // regulation of neuron projection development // inferred from sequence or structural similarity /// 0010975 // regulation of neuron projection development // inferred from electronic annotation /// 0015758 // glucose transport // inferred from electronic annotation /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0018105 // peptidyl-serine phosphorylation // inferred from electronic annotation /// 0030030 // cell projection organization // inferred from electronic annotation /// 0030154 // cell differentiation // traceable author statement /// 0030163 // protein catabolic process // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030307 // positive regulation of cell growth // inferred from direct assay /// 0030307 // positive regulation of cell growth // inferred from electronic annotation /// 0030334 // regulation of cell migration // inferred from mutant phenotype /// 0030334 // regulation of cell migration // traceable author statement /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0031018 // endocrine pancreas development // traceable author statement /// 0031295 // T cell costimulation // traceable author statement /// 0031659 // positive regulation of cyclin-dependent protein kinase activity involved in G1/S // inferred from direct assay /// 0031999 // negative regulation of fatty acid beta-oxidation // inferred from mutant phenotype /// 0032094 // response to food // inferred from electronic annotation /// 0032270 // positive regulation of cellular protein metabolic process // inferred from sequence or structural similarity /// 0032270 // positive regulation of cellular protein metabolic process // inferred from electronic annotation /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from mutant phenotype /// 0032869 // cellular response to insulin stimulus // inferred from sequence or structural similarity /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0032880 // regulation of protein localization // inferred from electronic annotation /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0034405 // response to fluid shear stress // inferred from mutant phenotype /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0042640 // anagen // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // non-traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from sequence or structural similarity /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0043536 // positive regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from mutant phenotype /// 0045600 // positive regulation of fat cell differentiation // inferred from mutant phenotype /// 0045725 // positive regulation of glycogen biosynthetic process // inferred from mutant phenotype /// 0045725 // positive regulation of glycogen biosynthetic process // non-traceable author statement /// 0045768 // positive regulation of anti-apoptosis // inferred from sequence or structural similarity /// 0045768 // positive regulation of anti-apoptosis // inferred from electronic annotation /// 0045792 // negative regulation of cell size // inferred from electronic annotation /// 0045884 // regulation of survival gene product expression // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046209 // nitric oxide metabolic process // traceable author statement /// 0046326 // positive regulation of glucose import // inferred from mutant phenotype /// 0046329 // negative regulation of JNK cascade // inferred from electronic annotation /// 0046777 // protein autophosphorylation // traceable author statement /// 0046889 // positive regulation of lipid biosynthetic process // inferred from mutant phenotype /// 0048009 // insulin-like growth factor receptor signaling pathway // inferred from mutant phenotype /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0050999 // regulation of nitric-oxide synthase activity // traceable author statement /// 0051000 // positive regulation of nitric-oxide synthase activity // inferred from mutant phenotype /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051146 // striated muscle cell differentiation // inferred from electronic annotation /// 0060644 // mammary gland epithelial cell differentiation // traceable author statement /// 0060709 // glycogen cell differentiation involved in embryonic placenta development // inferred from electronic annotation /// 0060716 // labyrinthine layer blood vessel development // inferred from electronic annotation /// 0070141 // response to UV-A // inferred from direct assay /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0071364 // cellular response to epidermal growth factor stimulus // inferred from electronic annotation /// 0090004 // positive regulation of establishment of protein localization in plasma membrane // inferred from mutant phenotype /// 0090201 // negative regulation of release of cytochrome c from mitochondria // inferred from sequence or structural similarity /// 0090201 // negative regulation of release of cytochrome c from mitochondria // inferred from electronic annotation /// 2001047 // regulation of G1/S transition checkpoint // traceable author statement","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005080 // protein kinase C binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred by curator /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0005547 // phosphatidylinositol-3,4,5-trisphosphate binding // inferred from direct assay /// 0016301 // kinase activity // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from sequence or structural similarity /// 0019899 // enzyme binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0030235 // nitric-oxide synthase regulator activity // inferred from mutant phenotype /// 0042802 // identical protein binding // inferred from physical interaction /// 0043325 // phosphatidylinositol-3,4-bisphosphate binding // inferred from direct assay","chr14:105235685-105261441 (-) // 94.1 // q32.33"]
["11720622_a_at",0.37421036,-0.031633377,-0.116230965,0.48573494,0.031633377,-0.04155922,0.8948778,0.7291308,-1.0593317,-0.083154336,1.0593317,"down","CDK16",5127,"0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // non-traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004693 // cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chrX:47078075-47089396 (+) // 93.74 // p11.23"]
["11737847_a_at",0.01765585,-0.0803442,-0.11437225,0.12139082,0.0061383247,-0.0061388016,0.45104143,0.15425535,-1.0713899,-0.09948362,1.0713899,"down","MR1",3140,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042612 // MHC class I protein complex // inferred from electronic annotation","0032393 // MHC class I receptor activity // traceable author statement","chr1:181003104-181024633 (+) // 99.92 // q25.3"]
["11738346_at",-0.036354065,0.036354303,0.32186556,-0.15995121,0.058523655,-0.036354065,0.6118445,0.29182822,1.1120455,0.15321586,1.1120455,"up","ZNF713",349075,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:55980330-56008433 (+) // 75.8 // p11.2"]
["11723580_at",-0.045004845,0.045004845,0.16487408,-0.31520557,0.06190014,-0.10385227,0.55459285,0.2360402,1.1281904,0.17401056,1.1281904,"up","C6orf228",221710,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr6:11094033-11138971 (+) // 76.8 // p24.2"]
["11728834_x_at",-0.24609518,-0.22698355,-0.16614914,0.19108534,0.1742754,0.16614914,0.018439455,0.00010143993,-1.3106167,-0.39024585,1.3106167,"down","C4orf32",132720,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr4:113066522-113110237 (+) // 91.55 // q25"]
["11735867_a_at",-0.25072336,0.09947729,-0.017204762,-0.3579135,0.017204762,0.20097733,0.9873872,0.9630142,-1.0066576,-0.009573055,1.0066576,"down","C5orf46",389336,"","0005576 // extracellular region // inferred from electronic annotation","","chr5:147272271-147286101 (-) // 87.39 // q32"]
["11763325_a_at",-0.29762268,-0.015020847,0.01606226,-0.29731035,0.1610794,0.0150203705,0.9030749,0.7454596,-1.0413513,-0.058456868,1.0413513,"down","FER",2241,"0000226 // microtubule cytoskeleton organization // inferred from mutant phenotype /// 0000278 // mitotic cell cycle // inferred from mutant phenotype /// 0001932 // regulation of protein phosphorylation // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0010591 // regulation of lamellipodium assembly // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from mutant phenotype /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0030838 // positive regulation of actin filament polymerization // inferred from mutant phenotype /// 0031532 // actin cytoskeleton reorganization // inferred from sequence or structural similarity /// 0032496 // response to lipopolysaccharide // inferred from sequence or structural similarity /// 0032869 // cellular response to insulin stimulus // inferred from sequence or structural similarity /// 0033007 // negative regulation of mast cell activation involved in immune response // inferred from sequence or structural similarity /// 0033007 // negative regulation of mast cell activation involved in immune response // inferred from electronic annotation /// 0034446 // substrate adhesion-dependent cell spreading // inferred from sequence or structural similarity /// 0034614 // cellular response to reactive oxygen species // inferred from sequence or structural similarity /// 0035426 // extracellular matrix-cell signaling // inferred from sequence or structural similarity /// 0035556 // intracellular signal transduction // traceable author statement /// 0036006 // cellular response to macrophage colony-stimulating factor stimulus // inferred from mutant phenotype /// 0036119 // response to platelet-derived growth factor stimulus // inferred from sequence or structural similarity /// 0038028 // insulin receptor signaling pathway via phosphatidylinositol 3-kinase cascade // inferred from sequence or structural similarity /// 0038095 // Fc-epsilon receptor signaling pathway // inferred from sequence or structural similarity /// 0038109 // Kit signaling pathway // inferred from sequence or structural similarity /// 0042058 // regulation of epidermal growth factor receptor signaling pathway // inferred from mutant phenotype /// 0042503 // tyrosine phosphorylation of Stat3 protein // inferred from direct assay /// 0044331 // cell-cell adhesion mediated by cadherin // inferred from sequence or structural similarity /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0048008 // platelet-derived growth factor receptor signaling pathway // traceable author statement /// 0050904 // diapedesis // inferred from sequence or structural similarity /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0070102 // interleukin-6-mediated signaling pathway // inferred from mutant phenotype","0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from direct assay /// 0030054 // cell junction // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0031234 // extrinsic to internal side of plasma membrane // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from direct assay /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from electronic annotation /// 0005154 // epidermal growth factor receptor binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from direct assay /// 0008289 // lipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0045295 // gamma-catenin binding // inferred from electronic annotation /// 0045296 // cadherin binding // inferred from electronic annotation /// 0050839 // cell adhesion molecule binding // inferred from electronic annotation","chr5:108527194-108532539 (+) // 97.54 // q21.3"]
["11737234_s_at",-0.26430035,-0.36856747,-0.011557102,0.11249256,0.4389143,0.011557579,0.31103054,0.07347738,-1.3217627,-0.40246317,1.3217627,"down","USP6",9098,"0006464 // cellular protein modification process // non-traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0016579 // protein deubiquitination // inferred from direct assay /// 0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0060627 // regulation of vesicle-mediated transport // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // traceable author statement /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from direct assay","0003676 // nucleic acid binding // traceable author statement /// 0004197 // cysteine-type endopeptidase activity // traceable author statement /// 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr17:5031686-5078339 (+) // 97.26 // p13.2"]
["11756771_x_at",-0.246346,-0.150311,-0.05802679,0.05802679,0.16233921,0.11308813,0.13325258,0.01340615,-1.1997324,-0.2627127,1.1997324,"down","SPTY2D1",144108,"","","","chr11:18627948-18634012 (-) // 95.06 // p15.1"]
["11728637_a_at",-0.032093048,-0.005730629,0.005730629,-0.0335598,0.054175377,0.05552101,0.63440937,0.3163249,-1.0253216,-0.036076497,1.0253216,"down","ATP5A1",498,"0001937 // negative regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0006172 // ADP biosynthetic process // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from sequence or structural similarity /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006754 // ATP biosynthetic process // inferred by curator /// 0006754 // ATP biosynthetic process // non-traceable author statement /// 0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0009790 // embryo development // inferred from sequence or structural similarity /// 0009790 // embryo development // inferred from electronic annotation /// 0015986 // ATP synthesis coupled proton transport // inferred from electronic annotation /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0042776 // mitochondrial ATP synthesis coupled proton transport // inferred by curator /// 0042776 // mitochondrial ATP synthesis coupled proton transport // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046034 // ATP metabolic process // inferred from electronic annotation","0000275 // mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) // inferred from electronic annotation /// 0005739 // mitochondrion // inferred by curator /// 0005739 // mitochondrion // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from direct assay /// 0005759 // mitochondrial matrix // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008180 // signalosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016469 // proton-transporting two-sector ATPase complex // inferred from electronic annotation /// 0033178 // proton-transporting two-sector ATPase complex, catalytic domain // inferred from electronic annotation /// 0045261 // proton-transporting ATP synthase complex, catalytic core F(1) // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0016887 // ATPase activity // inferred from electronic annotation /// 0022857 // transmembrane transporter activity // inferred by curator /// 0042288 // MHC class I protein binding // inferred from direct assay /// 0043499 // eukaryotic cell surface binding // inferred from direct assay /// 0043531 // ADP binding // inferred from electronic annotation /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism // inferred from sequence or structural similarity /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism // inferred from electronic annotation /// 0046961 // proton-transporting ATPase activity, rotational mechanism // inferred from electronic annotation","chr18:43664112-43678287 (-) // 93.66 // q21.1"]
["11722243_a_at",-0.18878174,-0.054461956,0.012802601,0.029846191,-0.012802601,0.20668983,0.46772155,0.16632394,-1.1106402,-0.15139148,1.1106402,"down","FBXO25",26260,"0016567 // protein ubiquitination // inferred from sequence or structural similarity /// 0016567 // protein ubiquitination // non-traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation","0000151 // ubiquitin ligase complex // non-traceable author statement /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0019005 // SCF ubiquitin ligase complex // inferred from sequence or structural similarity","0003779 // actin binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // non-traceable author statement","chr8:356807-419873 (+) // 95.1 // p23.3"]
["11743732_a_at",0.1073246,0.27992344,0.16783142,-0.1073246,-0.19020748,-0.1803379,0.07400438,0.0037676592,1.2695494,0.34431648,1.2695494,"up","RCAN1",1827,"0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007417 // central nervous system development // traceable author statement /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008015 // blood circulation // traceable author statement /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0019722 // calcium-mediated signaling // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0043666 // regulation of phosphoprotein phosphatase activity // inferred from electronic annotation /// 0048741 // skeletal muscle fiber development // inferred from electronic annotation /// 0051151 // negative regulation of smooth muscle cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr21:35888789-35987510 (-) // 95.78 // q22.12"]
["11724603_a_at",-0.0008482933,0.12357426,0.015041351,-0.14624453,-0.010463715,0.0008482933,0.4930906,0.1857699,1.0701965,0.09787573,1.0701965,"up","ZNF219",51222,"0006351 // transcription, DNA-dependent // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0004969 // histamine receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:21558236-21566808 (-) // 88.24 // q11.2"]
["11764222_at",-0.21704865,-0.065873146,0.2509861,-0.25374222,0.1262579,0.065873146,0.98603654,0.95913446,1.00688,0.009891817,1.00688,"up","","","","","","chr2:39011611-39012122 (-) // 83.98 // p22.1"]
["11722426_a_at",-0.20858073,0.058549404,-0.14934254,-0.010731697,0.010731697,0.015959263,0.58595,0.26620546,-1.0755771,-0.105110995,1.0755771,"down","FGL2",10875,"0007165 // signal transduction // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005577 // fibrinogen complex // traceable author statement /// 0005615 // extracellular space // inferred from electronic annotation","0005102 // receptor binding // inferred from electronic annotation","chr7:76822675-76829201 (-) // 84.6 // q11.23"]
["11757396_s_at",0.06247425,-0.092879295,-0.024719238,0.13995552,0.022073746,-0.022073746,0.68718743,0.3804816,-1.0461042,-0.06502655,1.0461042,"down","ANXA8 /// ANXA8L1 /// ANXA8L2","244 /// 653145 /// 728113","0007596 // blood coagulation // inferred from electronic annotation /// 0007599 // hemostasis // inferred from electronic annotation","","0005509 // calcium ion binding // inferred from electronic annotation /// 0005544 // calcium-dependent phospholipid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:47157982-47158897 (-) // 84.59 // q11.22"]
["11758071_s_at",-0.16087914,0.012518406,-0.039765358,0.07794666,0.029402256,-0.012518406,0.48188126,0.17700592,-1.0675613,-0.09431887,1.0675613,"down","SULF1",23213,"0001822 // kidney development // inferred from sequence or structural similarity /// 0001822 // kidney development // inferred from electronic annotation /// 0001937 // negative regulation of endothelial cell proliferation // inferred from direct assay /// 0002063 // chondrocyte development // inferred from sequence or structural similarity /// 0002063 // chondrocyte development // inferred from electronic annotation /// 0003094 // glomerular filtration // inferred from sequence or structural similarity /// 0003094 // glomerular filtration // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from sequence or structural similarity /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from electronic annotation /// 0014846 // esophagus smooth muscle contraction // inferred from sequence or structural similarity /// 0014846 // esophagus smooth muscle contraction // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from direct assay /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from direct assay /// 0030201 // heparan sulfate proteoglycan metabolic process // inferred from direct assay /// 0030201 // heparan sulfate proteoglycan metabolic process // non-traceable author statement /// 0030201 // heparan sulfate proteoglycan metabolic process // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from mutant phenotype /// 0030513 // positive regulation of BMP signaling pathway // inferred from mutant phenotype /// 0032836 // glomerular basement membrane development // inferred from sequence or structural similarity /// 0032836 // glomerular basement membrane development // inferred from electronic annotation /// 0035860 // glial cell-derived neurotrophic factor receptor signaling pathway // inferred from sequence or structural similarity /// 0035860 // glial cell-derived neurotrophic factor receptor signaling pathway // inferred from electronic annotation /// 0040036 // regulation of fibroblast growth factor receptor signaling pathway // inferred from mutant phenotype /// 0040037 // negative regulation of fibroblast growth factor receptor signaling pathway // inferred from mutant phenotype /// 0040037 // negative regulation of fibroblast growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0040037 // negative regulation of fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from direct assay /// 0048706 // embryonic skeletal system development // inferred from sequence or structural similarity /// 0048706 // embryonic skeletal system development // inferred from electronic annotation /// 0051216 // cartilage development // inferred from sequence or structural similarity /// 0051216 // cartilage development // inferred from electronic annotation /// 0060348 // bone development // inferred from sequence or structural similarity /// 0060348 // bone development // inferred from electronic annotation /// 0060384 // innervation // inferred from sequence or structural similarity /// 0060384 // innervation // inferred from electronic annotation /// 0060686 // negative regulation of prostatic bud formation // inferred from sequence or structural similarity /// 0060686 // negative regulation of prostatic bud formation // inferred from electronic annotation","0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // non-traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005795 // Golgi stack // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay","0003824 // catalytic activity // inferred from electronic annotation /// 0004065 // arylsulfatase activity // inferred from direct assay /// 0004065 // arylsulfatase activity // inferred from mutant phenotype /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008449 // N-acetylglucosamine-6-sulfatase activity // inferred from direct assay /// 0008449 // N-acetylglucosamine-6-sulfatase activity // inferred from mutant phenotype /// 0008449 // N-acetylglucosamine-6-sulfatase activity // inferred from electronic annotation /// 0008484 // sulfuric ester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:70571572-70572292 (+) // 98.49 // q13.3"]
["11762015_at",0.0066144466,-0.11228013,0.110729456,-0.0066144466,0.15979624,-0.1607511,0.99046993,0.972002,1.0029231,0.0042110346,1.0029231,"up","EPB41L4A",64097,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0019898 // extrinsic to membrane // inferred from electronic annotation","0008092 // cytoskeletal protein binding // inferred from electronic annotation","chr5:111599122-111755010 (-) // 86.01 // q22.2"]
["11764105_at",-0.0608294,0.019956112,-0.02387476,0.31917572,-0.0019593239,0.0019590855,0.62512785,0.30522364,-1.0927584,-0.1279745,1.0927584,"down","","","","","","chr7:48122624-48123183 (-) // 57.22 // p12.3"]
["11727897_a_at",0.27162838,0.22116756,0.19648743,-0.19648743,-0.3237524,-0.4024706,0.042418566,0.0010983213,1.4512854,0.5373312,1.4512854,"up","NAA38",51691,"0000398 // nuclear mRNA splicing, via spliceosome // non-traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017070 // U6 snRNA binding // non-traceable author statement","chr7:117824085-117833660 (+) // 83.17 // q31.31"]
["11732797_x_at",-0.11600208,-0.006382942,0.006382942,0.057771206,0.016310215,-0.035652637,0.65388525,0.33781755,-1.0363253,-0.05147698,1.0363253,"down","KIAA1841",84542,"","","","chr2:61293004-61351411 (+) // 89.75 // p16.1"]
["11761694_at",-0.026999474,0.01086998,-0.01086998,-0.18980789,0.14392853,0.2037754,0.85313195,0.64246994,-1.0436456,-0.061631914,1.0436456,"down","LOC100289424",100289424,"","","","chr10:134777218-134778783 (-) // 76.68 // q26.3"]
["11745160_s_at",0.021986008,-0.08003187,0.0134887695,0.029587746,-0.027971268,-0.0134887695,0.9179954,0.78289706,-1.0075804,-0.010894963,1.0075804,"down","TGFA",7039,"0000165 // MAPK cascade // inferred from direct assay /// 0000187 // activation of MAPK activity // inferred from direct assay /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043526 // neuroprotection // inferred from electronic annotation /// 0045741 // positive regulation of epidermal growth factor-activated receptor activity // inferred from direct assay /// 0045840 // positive regulation of mitosis // inferred from direct assay /// 0048523 // negative regulation of cellular process // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from direct assay /// 0051480 // cytosolic calcium ion homeostasis // inferred from electronic annotation /// 0051781 // positive regulation of cell division // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // non-traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0001948 // glycoprotein binding // inferred from electronic annotation /// 0004708 // MAP kinase kinase activity // inferred from direct assay /// 0005154 // epidermal growth factor receptor binding // inferred from direct assay /// 0005154 // epidermal growth factor receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from direct assay /// 0008083 // growth factor activity // inferred from electronic annotation","chr2:70676450-70780904 (-) // 100.0 // p13.3"]
["11737647_at",0.071666,0.00016379356,0.019928932,-0.00016379356,-0.11898255,-0.003169775,0.49140328,0.18444179,1.0507054,0.07135826,1.0507054,"up","EFCAB4B",84766,"0002115 // store-operated calcium entry // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0032237 // activation of store-operated calcium channel activity // inferred from mutant phenotype /// 0051928 // positive regulation of calcium ion transport // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay","0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr12:3749553-3862366 (-) // 94.39 // p13.32"]
["11733277_a_at",-0.0687387,0.0195086,-0.16029215,-0.0195086,0.029965162,0.09066272,0.4651143,0.1643225,-1.0744119,-0.10354715,1.0744119,"down","SLC2A2",6514,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0015755 // fructose transport // inferred from electronic annotation /// 0015758 // glucose transport // not recorded /// 0015758 // glucose transport // traceable author statement /// 0015758 // glucose transport // inferred from electronic annotation /// 0031018 // endocrine pancreas development // traceable author statement /// 0035428 // hexose transmembrane transport // traceable author statement /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070837 // dehydroascorbic acid transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0005903 // brush border // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0031526 // brush border membrane // inferred from electronic annotation","0005158 // insulin receptor binding // inferred from electronic annotation /// 0005215 // transporter activity // inferred from electronic annotation /// 0005355 // glucose transmembrane transporter activity // not recorded /// 0005355 // glucose transmembrane transporter activity // inferred from electronic annotation /// 0005355 // glucose transmembrane transporter activity // traceable author statement /// 0015149 // hexose transmembrane transporter activity // traceable author statement /// 0022857 // transmembrane transporter activity // inferred from electronic annotation /// 0022891 // substrate-specific transmembrane transporter activity // inferred from electronic annotation /// 0033300 // dehydroascorbic acid transporter activity // inferred from electronic annotation /// 0055056 // D-glucose transmembrane transporter activity // inferred from electronic annotation","chr3:170713801-170744768 (-) // 99.31 // q26.2"]
["11730952_a_at",-0.032067776,0.15747738,0.10004616,-0.4110031,-0.12883663,0.032068253,0.45616388,0.15834068,1.1846075,0.24440913,1.1846075,"up","PDK3",5165,"0000160 // two-component signal transduction system (phosphorelay) // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006006 // glucose metabolic process // traceable author statement /// 0006090 // pyruvate metabolic process // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0010510 // regulation of acetyl-CoA biosynthetic process from pyruvate // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018106 // peptidyl-histidine phosphorylation // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0000155 // two-component sensor activity // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // traceable author statement /// 0004673 // protein histidine kinase activity // inferred from electronic annotation /// 0004740 // pyruvate dehydrogenase (acetyl-transferring) kinase activity // inferred from electronic annotation /// 0004740 // pyruvate dehydrogenase (acetyl-transferring) kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chrX:24483343-24558207 (+) // 99.17 // p22.11"]
["11718170_a_at",0.54441833,-0.058131218,-0.06145954,0.3254838,-0.012338638,0.0123381615,0.96188885,0.89195985,1.0232189,0.033114776,1.0232189,"up","MLL4",9757,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0048096 // chromatin-mediated maintenance of transcription // non-traceable author statement /// 0051568 // histone H3-K4 methylation // inferred from direct assay /// 0051568 // histone H3-K4 methylation // inferred from mutant phenotype /// 0051568 // histone H3-K4 methylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0035097 // histone methyltransferase complex // inferred from direct assay /// 0035097 // histone methyltransferase complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from direct assay /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:36208910-36229779 (+) // 94.07 // q13.12"]
["11731567_a_at",-0.22542286,-0.06933308,0.05431652,-0.013681412,0.2320137,0.013681889,0.55097294,0.23318331,-1.1153407,-0.15748449,1.1153407,"down","MDM2",4193,"0000075 // cell cycle checkpoint // traceable author statement /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006461 // protein complex assembly // inferred from direct assay /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // inferred from mutant phenotype /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0007089 // traversing start control point of mitotic cell cycle // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from mutant phenotype /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0018205 // peptidyl-lysine modification // inferred from mutant phenotype /// 0030163 // protein catabolic process // inferred from electronic annotation /// 0031648 // protein destabilization // inferred from direct assay /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0034504 // protein localization to nucleus // inferred from direct assay /// 0042176 // regulation of protein catabolic process // inferred from direct assay /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043518 // negative regulation of DNA damage response, signal transduction by p53 class mediator // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045184 // establishment of protein localization // inferred from direct assay /// 0045787 // positive regulation of cell cycle // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045931 // positive regulation of mitotic cell cycle // inferred from mutant phenotype /// 0046677 // response to antibiotic // inferred from expression pattern /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0071157 // negative regulation of cell cycle arrest // inferred from direct assay /// 0071157 // negative regulation of cell cycle arrest // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from expression pattern","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from mutant phenotype /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from mutant phenotype /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016604 // nuclear body // inferred from direct assay /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0043234 // protein complex // inferred from direct assay","0002039 // p53 binding // inferred from physical interaction /// 0002039 // p53 binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // inferred from mutant phenotype /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:69201965-69239321 (+) // 78.58 // q15"]
["11720947_x_at",-0.19381618,-0.4087534,-0.4269495,0.509984,0.27020168,0.19381618,0.08580678,0.0052839294,-1.588693,-0.66784036,1.588693,"down","CA12",771,"0006730 // one-carbon metabolic process // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004089 // carbonate dehydratase activity // inferred from electronic annotation /// 0004089 // carbonate dehydratase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0016829 // lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:63614615-63674659 (-) // 87.76 // q22.2"]
["11733669_a_at",-0.14278793,-0.033983707,-0.09435558,0.033983707,0.13944578,0.047956944,0.17396002,0.022838965,-1.1205221,-0.16417116,1.1205221,"down","PAX3",5077,"0000435 // positive regulation of transcription from RNA polymerase II promoter by galactose // inferred from direct assay /// 0000435 // positive regulation of transcription from RNA polymerase II promoter by galactose // inferred from electronic annotation /// 0001755 // neural crest cell migration // inferred from electronic annotation /// 0001843 // neural tube closure // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0007517 // muscle organ development // inferred from electronic annotation /// 0007605 // sensory perception of sound // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0009887 // organ morphogenesis // traceable author statement /// 0016477 // cell migration // inferred from electronic annotation /// 0021527 // spinal cord association neuron differentiation // inferred from electronic annotation /// 0021549 // cerebellum development // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0030521 // androgen receptor signaling pathway // non-traceable author statement /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from electronic annotation /// 0032570 // response to progesterone stimulus // inferred from electronic annotation /// 0032870 // cellular response to hormone stimulus // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043967 // histone H4 acetylation // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048066 // developmental pigmentation // inferred from electronic annotation /// 0048663 // neuron fate commitment // inferred from electronic annotation /// 0060206 // estrous cycle phase // inferred from electronic annotation /// 0060594 // mammary gland specification // inferred from electronic annotation /// 2001038 // regulation of cellular response to drug // inferred from electronic annotation /// 2001141 // regulation of RNA biosynthetic process // inferred from electronic annotation","0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016922 // ligand-dependent nuclear receptor binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from direct assay /// 0035257 // nuclear hormone receptor binding // inferred from direct assay /// 0035257 // nuclear hormone receptor binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0050681 // androgen receptor binding // non-traceable author statement","chr2:223158348-223163700 (-) // 93.5 // q36.1"]
["11750492_a_at",0.3232746,0.015523434,-0.008959293,0.008959293,-0.19530964,-0.12704611,0.45245004,0.15523171,1.1602308,0.21441177,1.1602308,"up","RNF216",54476,"0006915 // apoptotic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0032648 // regulation of interferon-beta production // inferred from direct assay /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0050691 // regulation of defense response to virus by host // inferred from direct assay /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:5662209-5821257 (-) // 99.92 // p22.1"]
["11754372_x_at",0.017328262,-0.009068489,0.1901269,0.0036058426,-0.022870064,-0.0036058426,0.6256729,0.3064714,1.0524504,0.07375227,1.0524504,"up","CERS4",79603,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0030148 // sphingolipid biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046513 // ceramide biosynthetic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0050291 // sphingosine N-acyltransferase activity // inferred from electronic annotation","chr19:8315409-8327305 (+) // 87.21 // p13.2"]
["11753119_x_at",-0.045172215,-0.008162975,0.008162975,-0.14117241,0.31467867,0.32205772,0.6260449,0.30681843,-1.1330765,-0.18024532,1.1330765,"down","CMTM5",116173,"0006935 // chemotaxis // inferred from electronic annotation","0005615 // extracellular space // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation","chr14:23846254-23848980 (+) // 96.99 // q11.2"]
["11755632_a_at",-0.014028072,0.08597708,-0.033595562,-0.13342237,0.014028072,0.14029598,0.98302555,0.95008886,1.0040404,0.005817264,1.0040404,"up","MYH14",79784,"0007411 // axon guidance // traceable author statement /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0030048 // actin filament-based movement // inferred from electronic annotation","0001725 // stress fiber // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016459 // myosin complex // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation","0000146 // microfilament motor activity // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030898 // actin-dependent ATPase activity // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from electronic annotation","chr19:50783290-50813796 (+) // 92.75 // q13.33"]
["11755668_s_at",0.15450573,0.027503014,0.16375256,-0.21736288,-0.09851742,-0.027503014,0.20375648,0.03141189,1.1726031,0.22971481,1.1726031,"up","ATP5J2-PTCD1 /// PTCD1","100526740 /// 26024","","","","chr7:99016756-99036377 (-) // 99.84 // q22.1"]
["11717584_a_at",-0.19884014,0.034443855,0.054484367,0.11356735,-0.034443855,-0.11273289,0.9343501,0.8204237,-1.0177859,-0.02543412,1.0177859,"down","VAPB",9217,"0006665 // sphingolipid metabolic process // traceable author statement /// 0006874 // cellular calcium ion homeostasis // inferred from mutant phenotype /// 0006986 // response to unfolded protein // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // inferred from direct assay /// 0008219 // cell death // inferred from electronic annotation /// 0019048 // virus-host interaction // inferred from direct assay /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045070 // positive regulation of viral genome replication // inferred from mutant phenotype","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0048487 // beta-tubulin binding // inferred from direct assay","chr20:56964174-57022672 (+) // 94.01 // q13.32"]
["11755180_x_at",0.14495659,0.31845903,0.09839201,-0.33068085,-0.09839201,-0.266788,0.1271456,0.012146987,1.337207,0.41922277,1.337207,"up","TCF7",6932,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // not recorded /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // not recorded /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006955 // immune response // traceable author statement /// 0007420 // brain development // not recorded /// 0016055 // Wnt receptor signaling pathway // not recorded /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0022008 // neurogenesis // not recorded /// 0030538 // embryonic genitalia morphogenesis // inferred from electronic annotation /// 0033153 // T cell receptor V(D)J recombination // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0046632 // alpha-beta T cell differentiation // inferred from electronic annotation /// 0048557 // embryonic digestive tract morphogenesis // inferred from electronic annotation /// 0048619 // embryonic hindgut morphogenesis // inferred from electronic annotation /// 0048699 // generation of neurons // not recorded /// 0060070 // canonical Wnt receptor signaling pathway // not recorded /// 0071353 // cellular response to interleukin-4 // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // not recorded","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // not recorded /// 0043565 // sequence-specific DNA binding // not recorded /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay","chr5:133476225-133483927 (+) // 89.4 // q31.1"]
["11732370_a_at",-0.39578152,-0.2259531,-0.18563461,0.41474724,0.36551094,0.18563461,0.07009711,0.0033760709,-1.5063816,-0.5910873,1.5063816,"down","CUX1",1523,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0000301 // retrograde transport, vesicle recycling within Golgi // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006891 // intra-Golgi vesicle-mediated transport // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0042491 // auditory receptor cell differentiation // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030173 // integral to Golgi membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0030674 // protein binding, bridging // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr7:101559392-101894560 (+) // 96.23 // q22.1"]
["11747698_x_at",0.15584898,0.08205533,-0.08205533,0.20506406,-0.1175046,-0.27412724,0.7774979,0.5090608,1.0823289,0.11413899,1.0823289,"up","TCF4",6925,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006352 // transcription initiation, DNA-dependent // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0007399 // nervous system development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0065004 // protein-DNA complex assembly // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from sequence or structural similarity /// 0005667 // transcription factor complex // inferred from electronic annotation","0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from sequence or structural similarity /// 0001011 // sequence-specific DNA binding RNA polymerase recruiting transcription factor activity // inferred from sequence or structural similarity /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from sequence or structural similarity /// 0001087 // TFIIB-class binding transcription factor activity // inferred from sequence or structural similarity /// 0001093 // TFIIB-class transcription factor binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from sequence or structural similarity /// 0046982 // protein heterodimerization activity // non-traceable author statement /// 0070888 // E-box binding // inferred from sequence or structural similarity","chr18:52895094-53089743 (-) // 97.67 // q21.2"]
["11729167_a_at",-0.09372139,0.03300333,-0.025920391,0.025920391,0.065363884,-0.07725859,0.820343,0.5820444,-1.023531,-0.03355474,1.023531,"down","DCTD",1635,"0006206 // pyrimidine base metabolic process // traceable author statement /// 0006220 // pyrimidine nucleotide metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009165 // nucleotide biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046134 // pyrimidine nucleoside biosynthetic process // traceable author statement /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement","0005829 // cytosol // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004132 // dCMP deaminase activity // not recorded /// 0004132 // dCMP deaminase activity // inferred from electronic annotation /// 0004132 // dCMP deaminase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016810 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:183811246-183838747 (-) // 96.16 // q35.1"]
["11721598_a_at",-0.1145277,-0.0017380714,0.0017380714,0.040072918,-0.055322886,0.025460005,0.7298232,0.43835816,-1.0292399,-0.04157928,1.0292399,"down","EFS",10278,"0007155 // cell adhesion // inferred from electronic annotation /// 0035556 // intracellular signal transduction // traceable author statement","0005737 // cytoplasm // traceable author statement","0017124 // SH3 domain binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction","chr14:23825610-23834961 (-) // 96.0 // q11.2"]
["11740575_a_at",-0.071802616,0.12622166,0.027232409,-0.21465635,-0.027232647,0.15473604,0.86474645,0.66608477,1.0397726,0.056268085,1.0397726,"up","SORCS1",114815,"0007218 // neuropeptide signaling pathway // non-traceable author statement","0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008188 // neuropeptide receptor activity // non-traceable author statement","chr10:108333420-108924466 (-) // 94.17 // q25.1"]
["11758323_s_at",-0.00017738342,0.013148308,0.041107178,-0.046079636,-0.078424454,0.00017738342,0.33098242,0.08289074,1.0420816,0.059468243,1.0420816,"up","VOPP1",81552,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype","0005768 // endosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from direct assay /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031301 // integral to organelle membrane // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0004871 // signal transducer activity // inferred from mutant phenotype","chr1:148193220-148194190 (+) // 94.3 // q21.2 /// chr7:55540213-55640134 (-) // 90.13 // p11.2"]
["11732556_a_at",-0.0460701,0.16568589,-0.13409328,-0.2088089,0.0460701,0.12719297,0.98674786,0.960938,1.0048797,0.007022817,1.0048797,"up","FASLG",356,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from genetic interaction /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // traceable author statement /// 0006925 // inflammatory cell apoptotic process // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // inferred from direct assay /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // inferred from electronic annotation /// 0008625 // induction of apoptosis via death domain receptors // inferred from electronic annotation /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0016525 // negative regulation of angiogenesis // inferred from direct assay /// 0030644 // cellular chloride ion homeostasis // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0033554 // cellular response to stress // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0045742 // positive regulation of epidermal growth factor receptor signaling pathway // inferred from electronic annotation /// 0046666 // retinal cell programmed cell death // inferred from electronic annotation /// 0048388 // endosomal lumen acidification // inferred from electronic annotation /// 0060554 // induction of necroptosis of activated-T cells // inferred from direct assay /// 0060555 // induction of necroptosis by extracellular signals // inferred from direct assay /// 0070265 // necrotic cell death // inferred from direct assay /// 0070848 // response to growth factor stimulus // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0005901 // caveola // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043202 // lysosomal lumen // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0060205 // cytoplasmic membrane-bounded vesicle lumen // inferred from electronic annotation","0005102 // receptor binding // traceable author statement /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005164 // tumor necrosis factor receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:172628147-172636013 (+) // 88.62 // q24.3"]
["11734601_at",-0.013093233,0.013092995,0.05144596,-0.16430044,-0.099321604,0.1850853,0.8865961,0.7110727,1.0304879,0.04332756,1.0304879,"up","TAS2R43 /// TAS2R45","259289 /// 259291","0001580 // detection of chemical stimulus involved in sensory perception of bitter taste // inferred from direct assay /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred by curator /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050909 // sensory perception of taste // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred by curator /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031514 // motile cilium // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0060170 // cilium membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0008527 // taste receptor activity // inferred from direct assay /// 0033038 // bitter taste receptor activity // inferred from direct assay","chr12:11243929-11244918 (-) // 82.6 // p13.2"]
["11736569_at",-0.16553473,0.019188404,-0.019188404,-0.02567935,0.057693005,0.03382373,0.5980611,0.27809122,-1.054913,-0.07712408,1.054913,"down","PON1",5444,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0009605 // response to external stimulus // non-traceable author statement /// 0009636 // response to toxin // inferred from electronic annotation /// 0010875 // positive regulation of cholesterol efflux // inferred from direct assay /// 0019439 // aromatic compound catabolic process // inferred from direct assay /// 0032411 // positive regulation of transporter activity // inferred from direct assay /// 0034445 // negative regulation of plasma lipoprotein particle oxidation // inferred from direct assay /// 0046395 // carboxylic acid catabolic process // inferred from direct assay /// 0046434 // organophosphate catabolic process // inferred from direct assay /// 0046470 // phosphatidylcholine metabolic process // inferred from direct assay /// 0051099 // positive regulation of binding // inferred from direct assay","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0034364 // high-density lipoprotein particle // inferred from direct assay /// 0034364 // high-density lipoprotein particle // traceable author statement /// 0034364 // high-density lipoprotein particle // inferred from electronic annotation /// 0034366 // spherical high-density lipoprotein particle // inferred from direct assay","0004063 // aryldialkylphosphatase activity // inferred from direct assay /// 0004063 // aryldialkylphosphatase activity // inferred from electronic annotation /// 0004064 // arylesterase activity // inferred from direct assay /// 0004064 // arylesterase activity // non-traceable author statement /// 0004064 // arylesterase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005543 // phospholipid binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:94926987-94954019 (-) // 93.67 // q21.3"]
["11733011_x_at",0.03259468,0.065829754,-0.07123947,-0.03259468,-0.12567139,0.08086252,0.8601646,0.65615,1.0244594,0.034862757,1.0244594,"up","SLC44A4",80736,"0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:31830973-31846823 (-) // 87.5 // p21.33"]
["11752496_a_at",-0.1576643,0.09799194,-0.015999794,0.015999794,-0.22959423,0.090713024,0.9653217,0.9034155,1.0109674,0.015736438,1.0109674,"up","GAS7",8522,"0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0007050 // cell cycle arrest // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0030041 // actin filament polymerization // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0051017 // actin filament bundle assembly // inferred from electronic annotation","0001726 // ruffle // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005884 // actin filament // inferred from electronic annotation","0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0051015 // actin filament binding // inferred from electronic annotation","chr17:9819241-9939878 (-) // 99.9 // p13.1"]
["11744093_a_at",0.02610302,0.36001015,0.22369957,-0.4587164,-0.21551704,-0.02610302,0.2594912,0.050950646,1.3535202,0.43671638,1.3535202,"up","EEF1A2",1917,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006414 // translational elongation // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0010035 // response to inorganic substance // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005853 // eukaryotic translation elongation factor 1 complex // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0008135 // translation factor activity, nucleic acid binding // non-traceable author statement","chr20:62119364-62130668 (-) // 86.17 // q13.33"]
["11733928_a_at",-0.21392965,-0.14560509,0.03223133,-0.03223133,0.09866953,0.048808575,0.44401956,0.14899346,-1.1076612,-0.14751673,1.1076612,"down","ARMC8",25852,"","","","chr3:137906147-137965728 (+) // 94.37 // q22.3"]
["11746668_a_at",-0.13260746,-0.033691406,-0.06400204,0.12922478,0.033691406,0.05057144,0.17637247,0.023498476,-1.1079782,-0.14792952,1.1079782,"down","ALDH9A1",223,"0001822 // kidney development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0006081 // cellular aldehyde metabolic process // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0009437 // carnitine metabolic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042136 // neurotransmitter biosynthetic process // inferred from direct assay /// 0042445 // hormone metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045329 // carnitine biosynthetic process // inferred from electronic annotation /// 0045329 // carnitine biosynthetic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0004028 // 3-chloroallyl aldehyde dehydrogenase activity // traceable author statement /// 0004029 // aldehyde dehydrogenase (NAD) activity // inferred from direct assay /// 0004029 // aldehyde dehydrogenase (NAD) activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016620 // oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0019145 // aminobutyraldehyde dehydrogenase activity // inferred from direct assay /// 0019145 // aminobutyraldehyde dehydrogenase activity // inferred from electronic annotation /// 0033737 // 1-pyrroline dehydrogenase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043176 // amine binding // inferred from electronic annotation /// 0047105 // 4-trimethylammoniobutyraldehyde dehydrogenase activity // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation","chr1:165637910-165667823 (-) // 88.96 // q24.1"]
["11727335_a_at",-0.39181995,0.06627464,0.07814121,-0.18228006,0.014809608,-0.014809608,0.965028,0.9025243,-1.0151607,-0.021708095,1.0151607,"down","ACMSD",130013,"0006569 // tryptophan catabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046874 // quinolinate metabolic process // inferred from direct assay","0005829 // cytosol // inferred from direct assay","0001760 // aminocarboxymuconate-semialdehyde decarboxylase activity // inferred from direct assay /// 0001760 // aminocarboxymuconate-semialdehyde decarboxylase activity // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:135596185-135659645 (+) // 98.38 // q21.3"]
["11737440_a_at",0.25418186,0.07424259,0.05876398,-0.06954384,-0.15934229,-0.05876398,0.20877136,0.03298837,1.1687336,0.22494611,1.1687336,"up","BMF",90427,"0006915 // apoptotic process // inferred from sequence or structural similarity /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0032464 // positive regulation of protein homooligomerization // inferred from sequence or structural similarity /// 0032464 // positive regulation of protein homooligomerization // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from sequence or structural similarity /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from electronic annotation","0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016459 // myosin complex // inferred from sequence or structural similarity /// 0016459 // myosin complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr15:40380093-40398649 (-) // 95.53 // q15.1"]
["11723103_x_at",-0.52583504,-0.05047226,-0.019886017,0.077433586,0.73655796,0.01988554,0.46799082,0.16654274,-1.3915474,-0.47669008,1.3915474,"down","GNB4",59345,"0006112 // energy reserve metabolic process // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0071377 // cellular response to glucagon stimulus // traceable author statement","0005886 // plasma membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation","chr3:179113610-179169378 (-) // 82.48 // q26.33"]
["11746836_a_at",-0.12707281,-0.122143745,0.122143745,-0.15166187,0.2316699,0.29221344,0.67210627,0.36097392,-1.122279,-0.16643144,1.122279,"down","TMEFF2",23671,"","0005576 // extracellular region // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:192813774-193059642 (-) // 97.2 // q32.3"]
["11759529_at",-0.044649363,-0.020708323,0.020708323,0.15638614,0.13416624,-0.076195955,0.63975346,0.3223052,-1.06167,-0.086335324,1.06167,"down","ZC3H15",55854,"0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:187350884-187374697 (+) // 95.33 // q32.1"]
["11725792_a_at",0.044133663,-0.044133663,-0.08364773,0.22462463,-0.19194031,0.069001675,0.85831755,0.6527523,-1.0437512,-0.061777912,1.0437512,"down","MRE11A",4361,"0000019 // regulation of mitotic recombination // traceable author statement /// 0000075 // cell cycle checkpoint // inferred from electronic annotation /// 0000724 // double-strand break repair via homologous recombination // traceable author statement /// 0006259 // DNA metabolic process // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006302 // double-strand break repair // traceable author statement /// 0006302 // double-strand break repair // inferred from electronic annotation /// 0006303 // double-strand break repair via nonhomologous end joining // traceable author statement /// 0006310 // DNA recombination // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007004 // telomere maintenance via telomerase // traceable author statement /// 0007062 // sister chromatid cohesion // inferred from mutant phenotype /// 0007126 // meiosis // inferred from electronic annotation /// 0007129 // synapsis // inferred from electronic annotation /// 0007131 // reciprocal meiotic recombination // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0031954 // positive regulation of protein autophosphorylation // inferred from direct assay /// 0032508 // DNA duplex unwinding // inferred from mutant phenotype /// 0032876 // negative regulation of DNA endoreduplication // inferred from mutant phenotype /// 0033674 // positive regulation of kinase activity // inferred from direct assay /// 0051276 // chromosome organization // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // traceable author statement /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0000781 // chromosome, telomeric region // inferred from direct assay /// 0000790 // nuclear chromatin // inferred from electronic annotation /// 0000794 // condensed nuclear chromosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0030870 // Mre11 complex // inferred from direct assay /// 0030870 // Mre11 complex // non-traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000014 // single-stranded DNA specific endodeoxyribonuclease activity // traceable author statement /// 0003677 // DNA binding // inferred from direct assay /// 0003690 // double-stranded DNA binding // traceable author statement /// 0004003 // ATP-dependent DNA helicase activity // inferred from mutant phenotype /// 0004518 // nuclease activity // traceable author statement /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0004520 // endodeoxyribonuclease activity // traceable author statement /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008408 // 3'-5' exonuclease activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from electronic annotation","chr11:94150170-94227040 (-) // 92.53 // q21"]
["11757741_s_at",0.19208431,0.043780327,-0.043780327,0.10640144,-0.11085701,-0.15404701,0.64875716,0.33206856,1.084374,0.116862364,1.084374,"up","SOX4",6659,"0001501 // skeletal system development // inferred from sequence or structural similarity /// 0001501 // skeletal system development // inferred from electronic annotation /// 0001841 // neural tube formation // inferred from sequence or structural similarity /// 0001841 // neural tube formation // inferred from electronic annotation /// 0002328 // pro-B cell differentiation // inferred from sequence or structural similarity /// 0002328 // pro-B cell differentiation // inferred from electronic annotation /// 0003183 // mitral valve morphogenesis // inferred from sequence or structural similarity /// 0003183 // mitral valve morphogenesis // inferred from electronic annotation /// 0003211 // cardiac ventricle formation // inferred from sequence or structural similarity /// 0003211 // cardiac ventricle formation // inferred from electronic annotation /// 0003215 // cardiac right ventricle morphogenesis // inferred from sequence or structural similarity /// 0003215 // cardiac right ventricle morphogenesis // inferred from electronic annotation /// 0003289 // atrial septum primum morphogenesis // inferred from sequence or structural similarity /// 0003289 // atrial septum primum morphogenesis // inferred from electronic annotation /// 0003357 // noradrenergic neuron differentiation // inferred from sequence or structural similarity /// 0003357 // noradrenergic neuron differentiation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // inferred from mutant phenotype /// 0007507 // heart development // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0014009 // glial cell proliferation // inferred from sequence or structural similarity /// 0014009 // glial cell proliferation // inferred from electronic annotation /// 0021510 // spinal cord development // inferred from sequence or structural similarity /// 0021510 // spinal cord development // inferred from electronic annotation /// 0021522 // spinal cord motor neuron differentiation // inferred from sequence or structural similarity /// 0021522 // spinal cord motor neuron differentiation // inferred from electronic annotation /// 0021782 // glial cell development // inferred from sequence or structural similarity /// 0021782 // glial cell development // inferred from electronic annotation /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from sequence or structural similarity /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0030217 // T cell differentiation // inferred from sequence or structural similarity /// 0030217 // T cell differentiation // inferred from electronic annotation /// 0031018 // endocrine pancreas development // inferred from electronic annotation /// 0031397 // negative regulation of protein ubiquitination // inferred from mutant phenotype /// 0031647 // regulation of protein stability // inferred from mutant phenotype /// 0032024 // positive regulation of insulin secretion // inferred from sequence or structural similarity /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0035910 // ascending aorta morphogenesis // inferred from sequence or structural similarity /// 0035910 // ascending aorta morphogenesis // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from sequence or structural similarity /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0042769 // DNA damage response, detection of DNA damage // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0045727 // positive regulation of translation // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046826 // negative regulation of protein export from nucleus // inferred from mutant phenotype /// 0048485 // sympathetic nervous system development // inferred from sequence or structural similarity /// 0048485 // sympathetic nervous system development // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from mutant phenotype /// 0050821 // protein stabilization // inferred from electronic annotation /// 0060070 // canonical Wnt receptor signaling pathway // inferred from sequence or structural similarity /// 0060070 // canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0060174 // limb bud formation // inferred from sequence or structural similarity /// 0060174 // limb bud formation // inferred from electronic annotation /// 0060412 // ventricular septum morphogenesis // inferred from sequence or structural similarity /// 0060412 // ventricular septum morphogenesis // inferred from electronic annotation /// 0060548 // negative regulation of cell death // inferred from sequence or structural similarity /// 0060548 // negative regulation of cell death // inferred from electronic annotation /// 0060563 // neuroepithelial cell differentiation // inferred from sequence or structural similarity /// 0060563 // neuroepithelial cell differentiation // inferred from electronic annotation /// 0060993 // kidney morphogenesis // inferred from sequence or structural similarity /// 0060993 // kidney morphogenesis // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from sequence or structural similarity /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from sequence or structural similarity /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 2000761 // positive regulation of N-terminal peptidyl-lysine acetylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay","0000976 // transcription regulatory region sequence-specific DNA binding // inferred from sequence or structural similarity /// 0000976 // transcription regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0001046 // core promoter sequence-specific DNA binding // inferred from direct assay /// 0001046 // core promoter sequence-specific DNA binding // inferred from electronic annotation /// 0001071 // nucleic acid binding transcription factor activity // inferred from mutant phenotype /// 0001071 // nucleic acid binding transcription factor activity // inferred from electronic annotation /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0001105 // RNA polymerase II transcription coactivator activity // inferred from sequence or structural similarity /// 0001105 // RNA polymerase II transcription coactivator activity // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr6:21596716-21597392 (+) // 94.1 // p22.3"]
["11727551_a_at",-0.07203388,-0.11792946,-0.04772854,0.07665825,0.1779604,0.04772854,0.14339425,0.015565948,-1.1328942,-0.18001308,1.1328942,"down","ADAMTS10",81794,"0006508 // proteolysis // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation","0001527 // microfibril // inferred from direct assay /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:8645125-8673133 (-) // 97.65 // p13.2"]
["11721902_a_at",0.18941355,0.1905508,0.2443347,-0.29262066,-0.20098114,-0.18941355,0.026332507,0.00030813218,1.352634,0.43577147,1.352634,"up","SERPINI1",5274,"0007417 // central nervous system development // traceable author statement /// 0007422 // peripheral nervous system development // traceable author statement /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // not recorded /// 0030155 // regulation of cell adhesion // inferred from electronic annotation /// 0030162 // regulation of proteolysis // not recorded","0005576 // extracellular region // inferred from electronic annotation","0004867 // serine-type endopeptidase inhibitor activity // not recorded /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // traceable author statement /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr3:167453510-167543560 (+) // 99.62 // q26.1"]
["11763571_at",-0.25134993,0.0816679,0.15446472,-0.36265278,-0.020267487,0.020267487,0.7973972,0.5425914,1.0835847,0.115811884,1.0835847,"up","SLC1A7",6512,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006835 // dicarboxylic acid transport // traceable author statement /// 0006835 // dicarboxylic acid transport // inferred from electronic annotation /// 0015813 // L-glutamate transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005313 // L-glutamate transmembrane transporter activity // traceable author statement /// 0015293 // symporter activity // inferred from electronic annotation /// 0017153 // sodium:dicarboxylate symporter activity // inferred from electronic annotation","chr1:53580247-53584281 (+) // 83.97 // p32.3"]
["11746180_a_at",-0.18774223,-0.2370758,-0.20175362,0.37166786,0.37248135,0.18774319,0.044074457,0.0011921417,-1.4334465,-0.5194881,1.4334465,"down","CD55",1604,"0006958 // complement activation, classical pathway // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from direct assay /// 0030449 // regulation of complement activation // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0045730 // respiratory burst // non-traceable author statement","0005576 // extracellular region // traceable author statement /// 0005625 // soluble fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay","0004872 // receptor activity // inferred from electronic annotation","chr1:207495077-207533846 (+) // 96.56 // q32.2"]
["11759203_a_at",0.27756023,0.042574883,0.22163248,-0.042574883,-0.1485405,-0.0781436,0.1820026,0.025067944,1.2060939,0.27034223,1.2060939,"up","ZNF223 /// ZNF284","342909 /// 7766","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:44556163-44572142 (+) // 79.7 // q13.31"]
["11736723_a_at",0.38518,0.285367,0.12473965,-0.124740124,-0.30669308,-0.18372965,0.09916589,0.007172518,1.3852533,0.47014982,1.3852533,"up","PDLIM7",9260,"0001503 // ossification // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // inferred from electronic annotation","0001725 // stress fiber // inferred from electronic annotation /// 0001726 // ruffle // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0030054 // cell junction // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:176910394-176924602 (-) // 100.0 // q35.3"]
["11736662_a_at",0.09931326,-0.0785532,0.16553378,-0.09676099,-0.02454257,0.02454257,0.6273325,0.30853504,1.0675855,0.094351575,1.0675855,"up","CADPS2",93664,"0006810 // transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016082 // synaptic vesicle priming // inferred from electronic annotation /// 0045921 // positive regulation of exocytosis // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:121958478-122526554 (-) // 97.07 // q31.32"]
["11725019_a_at",0.17218828,-0.08722973,-0.11773491,0.20840645,0.03920412,-0.039204597,0.7910208,0.5313187,-1.0573069,-0.08039418,1.0573069,"down","MST1R",4486,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0006928 // cellular component movement // traceable author statement /// 0006952 // defense response // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007338 // single fertilization // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0009615 // response to virus // inferred from direct assay /// 0009615 // response to virus // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0038145 // macrophage colony-stimulating factor signaling pathway // traceable author statement /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0045087 // innate immune response // inferred from electronic annotation /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from direct assay","0001725 // stress fiber // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005011 // macrophage colony-stimulating factor receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction","chr3:49924437-49941306 (-) // 96.95 // p21.31"]
["11727803_at",0.09083557,-0.044817924,-0.0049362183,0.22127151,0.0049362183,-0.15040207,0.97351974,0.92470086,-1.0080553,-0.011574826,1.0080553,"down","GJA9-MYCBP /// MYCBP","100527950 /// 26292","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from expression pattern","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay","0003713 // transcription coactivator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr1:39328636-39340206 (-) // 88.2 // p34.3"]
["11740937_x_at",-0.05293703,-0.09469509,0.016019821,0.07185125,0.11499596,-0.016019821,0.39112252,0.11544825,-1.0723778,-0.10081326,1.0723778,"down","LIAS",11019,"0001843 // neural tube closure // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from sequence or structural similarity /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from sequence or structural similarity /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0009107 // lipoate biosynthetic process // inferred from sequence or structural similarity /// 0009107 // lipoate biosynthetic process // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from sequence or structural similarity /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation","0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016992 // lipoate synthase activity // inferred from sequence or structural similarity /// 0016992 // lipoate synthase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation","chr4:39460664-39479269 (+) // 80.02 // p14"]
["11740966_a_at",-0.12335873,-0.016165733,0.2541046,0.009678841,-0.009678841,0.013233185,0.9165465,0.77897125,1.0236925,0.033782404,1.0236925,"up","LOC391322",391322,"","","","chr22:24373110-24376211 (+) // 93.91 // q11.23"]
["11732166_a_at",-0.021089077,0.0588212,-0.018668175,0.0657258,-0.031624794,0.018668175,0.9187993,0.7846857,-1.007818,-0.011235105,1.007818,"down","LMF1",64788,"0006888 // ER to Golgi vesicle-mediated transport // inferred from electronic annotation /// 0009306 // protein secretion // inferred from electronic annotation /// 0033578 // protein glycosylation in Golgi // inferred from electronic annotation /// 0034382 // chylomicron remnant clearance // inferred from electronic annotation /// 0051006 // positive regulation of lipoprotein lipase activity // inferred from electronic annotation /// 0051604 // protein maturation // inferred from electronic annotation /// 0090181 // regulation of cholesterol metabolic process // inferred from electronic annotation /// 0090207 // regulation of triglyceride metabolic process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr16:903629-1020999 (-) // 98.26 // p13.3"]
["11715128_s_at",-0.3014288,0.050459385,-0.018997192,-0.29784822,0.07556677,0.018997192,0.962755,0.89516485,-1.0155262,-0.022227425,1.0155262,"down","PCDHGB5",56101,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr5:140777694-140780151 (+) // 100.0 // q31.3"]
["11728841_a_at",-0.031189919,-0.10780859,-0.030480862,0.07506418,0.11471319,0.030480862,0.16776301,0.02131513,-1.0942273,-0.12991247,1.0942273,"down","PLEKHA5",54477,"","","0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0005545 // 1-phosphatidylinositol binding // non-traceable author statement","chr12:19282628-19529334 (+) // 96.91 // p12.3"]
["11724615_at",0.7774272,-0.15840387,-0.11962843,0.46756983,0.11962843,-0.17823696,0.9780801,0.93696696,1.0211145,0.030144604,1.0211145,"up","LIMK1",3984,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // traceable author statement /// 0032233 // positive regulation of actin filament bundle assembly // inferred from direct assay /// 0045773 // positive regulation of axon extension // inferred from sequence or structural similarity /// 0051444 // negative regulation of ubiquitin-protein ligase activity // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0043005 // neuron projection // inferred from sequence or structural similarity","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // non-traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0031072 // heat shock protein binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:73498155-73536855 (+) // 95.33 // q11.23"]
["11723313_s_at",0.21821213,0.061016083,0.06948757,-0.061016083,-0.19667912,-0.23945999,0.15845892,0.019065494,1.215843,0.2819569,1.215843,"up","PXMP2",5827,"","0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005777 // peroxisome // inferred from electronic annotation /// 0005778 // peroxisomal membrane // inferred from direct assay /// 0005778 // peroxisomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr12:133264125-133281571 (+) // 97.22 // q24.33"]
["11726087_at",0.11612177,0.04974699,0.12234259,-0.22061062,-0.1415968,-0.04974699,0.13064788,0.012874138,1.1755929,0.23338854,1.1755929,"up","HSPB3",8988,"0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // traceable author statement /// 0008219 // cell death // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","","chr5:53751430-53752207 (+) // 98.73 // q11.2"]
["11723247_a_at",-0.21737766,0.025398254,-0.009602547,-0.16558981,0.009602547,0.12974644,0.8499412,0.6364057,-1.0413443,-0.058447126,1.0413443,"down","SFRP1",6422,"0001649 // osteoblast differentiation // inferred from expression pattern /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001843 // neural tube closure // inferred from electronic annotation /// 0001944 // vasculature development // not recorded /// 0001954 // positive regulation of cell-matrix adhesion // inferred from sequence or structural similarity /// 0002244 // hemopoietic progenitor cell differentiation // inferred from direct assay /// 0006309 // apoptotic DNA fragmentation // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007420 // brain development // not recorded /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008406 // gonad development // not recorded /// 0008584 // male gonad development // inferred from electronic annotation /// 0008585 // female gonad development // inferred from electronic annotation /// 0009267 // cellular response to starvation // inferred from expression pattern /// 0009790 // embryo development // not recorded /// 0009950 // dorsal/ventral axis specification // inferred from direct assay /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0010564 // regulation of cell cycle process // inferred from mutant phenotype /// 0010629 // negative regulation of gene expression // inferred from direct assay /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0010719 // negative regulation of epithelial to mesenchymal transition // inferred from direct assay /// 0014034 // neural crest cell fate commitment // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from direct assay /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0022601 // menstrual cycle phase // inferred from expression pattern /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from direct assay /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from direct assay /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from mutant phenotype /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0030278 // regulation of ossification // inferred from electronic annotation /// 0030279 // negative regulation of ossification // inferred from direct assay /// 0030279 // negative regulation of ossification // inferred from mutant phenotype /// 0030279 // negative regulation of ossification // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from direct assay /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0030336 // negative regulation of cell migration // inferred from direct assay /// 0030514 // negative regulation of BMP signaling pathway // inferred from electronic annotation /// 0032855 // positive regulation of Rac GTPase activity // inferred from sequence or structural similarity /// 0033689 // negative regulation of osteoblast proliferation // inferred from mutant phenotype /// 0033689 // negative regulation of osteoblast proliferation // inferred from electronic annotation /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0042493 // response to drug // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from direct assay /// 0044345 // stromal-epithelial cell signaling involved in prostate gland development // inferred from electronic annotation /// 0045578 // negative regulation of B cell differentiation // inferred from mutant phenotype /// 0045578 // negative regulation of B cell differentiation // inferred from electronic annotation /// 0045600 // positive regulation of fat cell differentiation // inferred from direct assay /// 0045668 // negative regulation of osteoblast differentiation // inferred from electronic annotation /// 0045671 // negative regulation of osteoclast differentiation // inferred from electronic annotation /// 0045765 // regulation of angiogenesis // inferred from sequence or structural similarity /// 0045880 // positive regulation of smoothened signaling pathway // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0046546 // development of primary male sexual characteristics // inferred from electronic annotation /// 0046676 // negative regulation of insulin secretion // inferred from direct assay /// 0046851 // negative regulation of bone remodeling // inferred from mutant phenotype /// 0048147 // negative regulation of fibroblast proliferation // inferred from direct assay /// 0050679 // positive regulation of epithelial cell proliferation // inferred from mutant phenotype /// 0050680 // negative regulation of epithelial cell proliferation // inferred from direct assay /// 0050732 // negative regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0051496 // positive regulation of stress fiber assembly // inferred from sequence or structural similarity /// 0051894 // positive regulation of focal adhesion assembly // inferred from sequence or structural similarity /// 0060070 // canonical Wnt receptor signaling pathway // inferred from direct assay /// 0060071 // Wnt receptor signaling pathway, planar cell polarity pathway // inferred from electronic annotation /// 0060218 // hemopoietic stem cell differentiation // inferred from direct assay /// 0060346 // bone trabecula formation // inferred from electronic annotation /// 0060527 // prostate epithelial cord arborization involved in prostate glandular acinus morphogenesis // inferred from electronic annotation /// 0060687 // regulation of branching involved in prostate gland morphogenesis // inferred from electronic annotation /// 0060766 // negative regulation of androgen receptor signaling pathway // inferred from direct assay /// 0071305 // cellular response to vitamin D // inferred from expression pattern /// 0071347 // cellular response to interleukin-1 // inferred from expression pattern /// 0071356 // cellular response to tumor necrosis factor // inferred from direct assay /// 0071363 // cellular response to growth factor stimulus // inferred from direct assay /// 0071380 // cellular response to prostaglandin E stimulus // inferred from expression pattern /// 0071380 // cellular response to prostaglandin E stimulus // inferred from electronic annotation /// 0071391 // cellular response to estrogen stimulus // inferred from direct assay /// 0071391 // cellular response to estrogen stimulus // inferred from electronic annotation /// 0071392 // cellular response to estradiol stimulus // inferred from expression pattern /// 0071456 // cellular response to hypoxia // inferred from expression pattern /// 0071481 // cellular response to X-ray // inferred from electronic annotation /// 0071504 // cellular response to heparin // inferred from direct assay /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from expression pattern /// 0071773 // cellular response to BMP stimulus // inferred from expression pattern /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from direct assay /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from mutant phenotype /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from direct assay /// 2000052 // positive regulation of non-canonical Wnt receptor signaling pathway // inferred from direct assay /// 2000054 // negative regulation of Wnt receptor signaling pathway involved in dorsal/ventral axis specification // inferred from direct assay /// 2000080 // negative regulation of canonical Wnt receptor signaling pathway involved in controlling type B pancreatic cell proliferation // inferred from direct assay /// 2000117 // negative regulation of cysteine-type endopeptidase activity // inferred from mutant phenotype /// 2000270 // negative regulation of fibroblast apoptotic process // inferred from direct assay /// 2000271 // positive regulation of fibroblast apoptotic process // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0005622 // intracellular // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // not recorded /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0009986 // cell surface // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0042995 // cell projection // not recorded","0004197 // cysteine-type endopeptidase activity // inferred from mutant phenotype /// 0005109 // frizzled binding // inferred from physical interaction /// 0008144 // drug binding // inferred from direct assay /// 0008201 // heparin binding // inferred from direct assay /// 0017147 // Wnt-protein binding // inferred from physical interaction /// 0017147 // Wnt-protein binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // not recorded /// 0042802 // identical protein binding // inferred from physical interaction /// 0042813 // Wnt-activated receptor activity // not recorded","chr8:41119477-41166990 (-) // 97.65 // p11.21"]
["11745412_s_at",-0.16217804,-0.04597521,-0.05344677,0.04597521,0.061835766,0.2508874,0.2630827,0.052520674,-1.1540983,-0.20676607,1.1540983,"down","LOC441178",441178,"","","","chr6:168083767-168084736 (-) // 99.38 // q27"]
["11757242_x_at",-0.45576954,-0.046385765,0.08666372,-0.19338894,0.046385765,0.2633214,0.73573905,0.44581804,-1.1307421,-0.17726988,1.1307421,"down","LOC339240",339240,"","0005576 // extracellular region // inferred from electronic annotation","","chr17:18325494-18328647 (+) // 80.24 // p11.2 /// chr17:20422385-20425541 (-) // 82.71 // p11.2 /// chr17:16750714-16753867 (-) // 73.04 // p11.2"]
["11744034_a_at",0.08967495,0.06672859,-0.023039818,0.023039818,-0.29930878,-0.17129898,0.4058455,0.12438698,1.1436486,0.19364387,1.1436486,"up","VASP",7408,"0001843 // neural tube closure // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0008154 // actin polymerization or depolymerization // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051289 // protein homotetramerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0031258 // lamellipodium membrane // inferred from electronic annotation /// 0031527 // filopodium membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005522 // profilin binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation","chr19:46010694-46030241 (+) // 89.99 // q13.32"]
["11741280_s_at",0.22201943,-0.13841486,-0.060509443,0.09269333,-0.20627213,0.060509443,0.9536452,0.8693337,1.0177535,0.025388157,1.0177535,"up","CASC1",55259,"","0005881 // cytoplasmic microtubule // inferred from electronic annotation","0008017 // microtubule binding // inferred from electronic annotation /// 0048487 // beta-tubulin binding // inferred from electronic annotation","chr12:25261223-25348094 (-) // 99.41 // p12.1"]
["11757313_s_at",0.29632092,0.04889679,-0.059049606,0.2501707,-0.04889679,-0.13755417,0.86328954,0.6624126,1.0527402,0.07414947,1.0527402,"up","VAT1",10493,"0010637 // negative regulation of mitochondrial fusion // inferred from mutant phenotype /// 0016049 // cell growth // non-traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation","chr17:41166623-41167974 (-) // 92.54 // q21.31"]
["11727264_at",0.16324806,-0.08637667,0.0570364,0.066880226,-0.0570364,-0.22380257,0.6676004,0.35520324,1.0836926,0.11595551,1.0836926,"up","LRRC8E",80131,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr19:7953389-7966901 (+) // 85.61 // p13.2"]
["11751320_a_at",0.0044107437,0.026079655,-0.004410267,-0.09004593,-0.109081745,0.010130882,0.4193436,0.13278577,1.0509487,0.0716923,1.0509487,"up","POLL",27343,"0006260 // DNA replication // non-traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006289 // nucleotide-excision repair // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0016446 // somatic hypermutation of immunoglobulin genes // non-traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003887 // DNA-directed DNA polymerase activity // inferred from electronic annotation /// 0003887 // DNA-directed DNA polymerase activity // non-traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:103338990-103348006 (-) // 99.86 // q24.32"]
["11722091_a_at",0.027548313,0.059356213,-0.027548313,0.21467638,-0.037733078,-0.11977625,0.99784994,0.99472696,1.0005059,0.0007297098,1.0005059,"up","PRR5",55615,"0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0030036 // actin cytoskeleton organization // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0032321 // positive regulation of Rho GTPase activity // inferred from direct assay /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from direct assay /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // inferred from direct assay /// 0005100 // Rho GTPase activator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr22:45072687-45133561 (+) // 97.79 // q13.31"]
["11718474_a_at",0.08503151,0.062376976,0.034805298,-0.034805298,-0.2151556,-0.2257309,0.18580522,0.026142467,1.16417,0.21930178,1.16417,"up","IDH1",3417,"0006097 // glyoxylate cycle // inferred from electronic annotation /// 0006099 // tricarboxylic acid cycle // inferred from electronic annotation /// 0006102 // isocitrate metabolic process // inferred from direct assay /// 0006102 // isocitrate metabolic process // inferred from electronic annotation /// 0006103 // 2-oxoglutarate metabolic process // inferred from direct assay /// 0006103 // 2-oxoglutarate metabolic process // traceable author statement /// 0006740 // NADPH regeneration // traceable author statement /// 0006749 // glutathione metabolic process // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation /// 0005782 // peroxisomal matrix // traceable author statement /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0000287 // magnesium ion binding // inferred from direct assay /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004450 // isocitrate dehydrogenase (NADP+) activity // not recorded /// 0004450 // isocitrate dehydrogenase (NADP+) activity // inferred from direct assay /// 0004450 // isocitrate dehydrogenase (NADP+) activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation","chr2:209100952-209120522 (-) // 92.68 // q34"]
["11745815_x_at",0.33629513,0.07791519,-0.11386204,0.11409187,-0.21893883,-0.07791519,0.6844947,0.37711993,1.1180904,0.16103682,1.1180904,"up","C16orf5",29965,"0006915 // apoptotic process // inferred from genetic interaction /// 0006917 // induction of apoptosis // inferred from direct assay /// 0033209 // tumor necrosis factor-mediated signaling pathway // inferred from genetic interaction /// 0042771 // DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement","","chr16:4560706-4565107 (-) // 95.22 // p13.3"]
["11717432_a_at",-0.121850014,-0.095677376,-0.0664711,0.10684109,0.17571354,0.0664711,0.0764652,0.0040924437,-1.1574967,-0.21100807,1.1574967,"down","ECHDC1",55862,"0008152 // metabolic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004492 // methylmalonyl-CoA decarboxylase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from sequence or structural similarity /// 0016831 // carboxy-lyase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation","chr6:127609856-127665037 (-) // 98.5 // q22.33"]
["11720731_a_at",-0.018297195,0.018297195,-0.018494606,0.12063122,0.051490784,-0.07882595,0.8113348,0.56658953,-1.0261656,-0.037263576,1.0261656,"down","SUMF1",285362,"0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation","0016491 // oxidoreductase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:4402829-4508954 (-) // 90.13 // p26.1"]
["11741989_a_at",-0.23340559,0.0009446144,-0.0009446144,-0.15311384,0.0014953613,0.019316196,0.90097314,0.7410433,-1.0236348,-0.03370109,1.0236348,"down","P2RX2",22953,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // not recorded /// 0010524 // positive regulation of calcium ion transport into cytosol // non-traceable author statement /// 0035590 // purinergic nucleotide receptor signaling pathway // not recorded /// 0035590 // purinergic nucleotide receptor signaling pathway // non-traceable author statement /// 0050850 // positive regulation of calcium-mediated signaling // non-traceable author statement /// 0051260 // protein homooligomerization // inferred from physical interaction","0016020 // membrane // not recorded /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0001614 // purinergic nucleotide receptor activity // not recorded /// 0001614 // purinergic nucleotide receptor activity // non-traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004931 // extracellular ATP-gated cation channel activity // not recorded /// 0004931 // extracellular ATP-gated cation channel activity // non-traceable author statement /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0015276 // ligand-gated ion channel activity // traceable author statement /// 0042802 // identical protein binding // inferred from physical interaction","chr12:133195402-133198972 (+) // 96.32 // q24.33"]
["11741321_a_at",0.052414894,-0.23817968,0.019425869,0.21130657,-0.019425392,-0.2647705,0.94937676,0.8597225,-1.0218263,-0.031149928,1.0218263,"down","CREM",1390,"0006006 // glucose metabolic process // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006687 // glycosphingolipid metabolic process // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042752 // regulation of circadian rhythm // inferred from electronic annotation /// 0048384 // retinoic acid receptor signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008140 // cAMP response element binding protein binding // non-traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr10:35484829-35501885 (+) // 99.52 // p11.21"]
["11753889_a_at",-0.12437248,0.14457655,-0.087052345,-0.0076580048,0.0076584816,0.2158308,0.73322827,0.44292197,-1.067493,-0.094226554,1.067493,"down","STAT6",6778,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0002296 // T-helper 1 cell lineage commitment // inferred from electronic annotation /// 0002829 // negative regulation of type 2 immune response // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048295 // positive regulation of isotype switching to IgE isotypes // inferred from electronic annotation","0000790 // nuclear chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr12:57501945-57502061 (-) // 99.15 // q13.3"]
["11735141_at",-0.04118371,0.15689945,0.04118371,-0.19517136,-0.14560986,0.06366873,0.52858,0.21370025,1.1054783,0.14467068,1.1054783,"up","SORCS3",22986,"0007218 // neuropeptide signaling pathway // non-traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0008188 // neuropeptide receptor activity // non-traceable author statement","chr10:106400858-107024999 (+) // 99.71 // q25.1"]
["11756090_s_at",-0.08716583,0.040309906,0.0724287,-0.16442108,0.23522186,-0.040309906,0.99626577,0.9903763,-1.001137,-0.0016394387,1.001137,"down","ZHX1",11244,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from direct assay","chr14:63763014-63764134 (+) // 49.18 // q23.2"]
["11740919_a_at",-0.078764915,0.23654318,-0.121243,0.09685421,-0.03124094,0.03124094,0.95531183,0.87377137,-1.0140342,-0.020106241,1.0140342,"down","RSPO1",284654,"0002090 // regulation of receptor internalization // inferred from direct assay /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from direct assay /// 0050896 // response to stimulus // inferred from electronic annotation /// 0060070 // canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation","chr1:38076950-38100491 (-) // 84.99 // p34.3"]
["11730501_a_at",0.056850433,0.09300947,-0.022791386,0.022791862,-0.29745865,-0.33532763,0.37681141,0.107098155,1.1856577,0.2456876,1.1856577,"up","CACNA2D3",55799,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005245 // voltage-gated calcium channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:54156650-55108582 (+) // 97.56 // p21.1"]
["11743248_at",-0.1751585,-0.13270521,0.25358057,-0.28181505,0.1922183,0.13270521,0.9579321,0.8801456,-1.0227573,-0.032463823,1.0227573,"down","ONECUT3",390874,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0031018 // endocrine pancreas development // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr19:1753661-1775602 (+) // 63.32 // p13.3"]
["11761537_at",-0.21011305,0.08438349,-0.12898564,-0.031068802,0.031068802,0.29398632,0.55939573,0.24050169,-1.1351638,-0.18290046,1.1351638,"down","TM2D3",80213,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr15:102173275-102192579 (-) // 53.12 // q26.3"]
["11745685_a_at",0.14264059,0.028301239,-0.028301239,0.43626118,-0.14451599,-0.4715128,0.8865961,0.7110972,1.0773368,0.10746932,1.0773368,"up","SCLT1",132320,"0045162 // clustering of voltage-gated sodium channels // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0017080 // sodium channel regulator activity // inferred from electronic annotation","chr4:129805500-130014567 (-) // 99.93 // q28.2"]
["11764008_at",-0.34598565,-0.2790923,0.0041747093,-0.0041747093,0.04596281,0.16786242,0.3256353,0.080320045,-1.2115477,-0.27685124,1.2115477,"down","","","","","","chr9:121450030-121468238 (-) // 43.26 // q33.1"]
["11731749_at",-0.0018854141,0.0018854141,-0.26256895,-0.1990714,0.02213192,0.32004547,0.7586427,0.48050502,-1.0982641,-0.13522501,1.0982641,"down","SNX32",254122,"0006810 // transport // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","","0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr11:65601409-65621172 (+) // 95.15 // q13.1"]
["11719543_a_at",-0.05783224,-0.09679079,-0.16031218,0.057832718,0.24445438,0.06110573,0.19840847,0.029936217,-1.1696763,-0.22610933,1.1696763,"down","C3orf18",51161,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:50595461-50605199 (-) // 95.98 // p21.31"]
["11756854_a_at",0.16502523,-0.0374794,0.049511433,-0.12942076,-0.09666824,0.037478924,0.50138795,0.19207267,1.0881588,0.121889174,1.0881588,"up","EHBP1",23301,"","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","","chr2:63192096-63272798 (+) // 100.0 // p15"]
["11749575_at",-0.2451582,-0.062833786,0.06882954,-0.3733163,0.062833786,0.25793552,0.91669714,0.77940136,-1.0440603,-0.062205106,1.0440603,"down","LOC100287329",100287329,"","","","chr6:31527069-31540480 (-) // 96.53 // p21.33"]
["11717457_a_at",0.18160725,-0.059018135,0.059018135,0.15934658,-0.13477516,-0.24328232,0.6959772,0.39109707,1.0969056,0.13343936,1.0969056,"up","NLGN2",57555,"0007155 // cell adhesion // inferred from electronic annotation /// 0007158 // neuron cell-cell adhesion // inferred from sequence or structural similarity /// 0007416 // synapse assembly // not recorded /// 0007416 // synapse assembly // inferred from sequence or structural similarity /// 0007416 // synapse assembly // non-traceable author statement /// 0016337 // cell-cell adhesion // non-traceable author statement /// 0032230 // positive regulation of synaptic transmission, GABAergic // inferred from sequence or structural similarity /// 0035418 // protein localization to synapse // inferred from sequence or structural similarity /// 0045217 // cell-cell junction maintenance // non-traceable author statement /// 0051965 // positive regulation of synapse assembly // inferred from sequence or structural similarity /// 0051968 // positive regulation of synaptic transmission, glutamatergic // inferred from sequence or structural similarity /// 0072553 // terminal button organization // inferred from sequence or structural similarity /// 0097104 // postsynaptic membrane assembly // inferred from sequence or structural similarity /// 0097105 // presynaptic membrane assembly // inferred from sequence or structural similarity /// 0097116 // gephyrin clustering // inferred from sequence or structural similarity /// 0097119 // postsynaptic density protein 95 clustering // inferred from sequence or structural similarity /// 0097151 // positive regulation of inhibitory postsynaptic membrane potential // inferred from sequence or structural similarity /// 2000311 // regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity // inferred from sequence or structural similarity /// 2000463 // positive regulation of excitatory postsynaptic membrane potential // inferred from sequence or structural similarity","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // not recorded /// 0005887 // integral to plasma membrane // inferred from sequence or structural similarity /// 0009986 // cell surface // not recorded /// 0009986 // cell surface // inferred from sequence or structural similarity /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0045202 // synapse // not recorded /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // non-traceable author statement /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0060077 // inhibitory synapse // inferred from sequence or structural similarity","0004091 // carboxylesterase activity // not recorded /// 0004872 // receptor activity // not recorded /// 0042043 // neurexin family protein binding // not recorded /// 0042043 // neurexin family protein binding // inferred from sequence or structural similarity /// 0042043 // neurexin family protein binding // non-traceable author statement /// 0050839 // cell adhesion molecule binding // inferred from sequence or structural similarity","chr17:7311501-7323179 (+) // 94.41 // p13.1"]
["11735338_at",0.04866028,-0.1793046,-0.24150705,0.16094208,-0.048660755,0.13117838,0.42269027,0.13513057,-1.1528491,-0.20520365,1.1528491,"down","LINC00482",284185,"","","","chr17:79276623-79283053 (-) // 77.12 // q25.3"]
["11716992_at",0.19270134,-0.056021214,-0.07210255,0.08419514,0,0,0.98111683,0.9456818,-1.004543,-0.006539244,1.004543,"down","CIC",23152,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr19:42788816-42799948 (+) // 95.51 // q13.2"]
["11738637_a_at",0.45852947,-0.06616783,-0.15766525,0.51906013,0.019568443,-0.019568443,0.8964996,0.7326087,-1.0679084,-0.09478791,1.0679084,"down","CTBP1",1487,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0019079 // viral genome replication // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031065 // positive regulation of histone deacetylation // inferred from mutant phenotype /// 0034401 // regulation of transcription by chromatin organization // inferred from mutant phenotype /// 0035067 // negative regulation of histone acetylation // inferred from mutant phenotype /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0050872 // white fat cell differentiation // inferred from sequence or structural similarity /// 0050872 // white fat cell differentiation // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0090241 // negative regulation of histone H4 acetylation // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from direct assay /// 0017053 // transcriptional repressor complex // inferred from sequence or structural similarity /// 0017053 // transcriptional repressor complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0001106 // RNA polymerase II transcription corepressor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // traceable author statement /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0048037 // cofactor binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from sequence or structural similarity /// 0051287 // NAD binding // inferred from electronic annotation","chr4:1205232-1242914 (-) // 90.98 // p16.3"]
["11720930_s_at",0.44217873,0.012269974,-0.012269497,0.06523323,-0.1782279,-0.06499243,0.5947461,0.27468017,1.1540631,0.20672211,1.1540631,"up","DLST",1743,"0006091 // generation of precursor metabolites and energy // traceable author statement /// 0006099 // tricarboxylic acid cycle // traceable author statement /// 0006099 // tricarboxylic acid cycle // inferred from electronic annotation /// 0006103 // 2-oxoglutarate metabolic process // inferred from electronic annotation /// 0006554 // lysine catabolic process // traceable author statement /// 0006734 // NADH metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0033512 // L-lysine catabolic process to acetyl-CoA via saccharopine // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005792 // microsome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045252 // oxoglutarate dehydrogenase complex // inferred from electronic annotation","0004149 // dihydrolipoyllysine-residue succinyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0031072 // heat shock protein binding // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from electronic annotation","chr14:75348595-75370443 (+) // 98.64 // q24.3"]
["11723309_at",-0.049003124,0.24661398,-0.017021656,-0.08909607,0.017021656,0.16138363,0.929645,0.8100251,1.0213141,0.03042669,1.0213141,"up","TNFRSF10D",8793,"0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0007165 // signal transduction // traceable author statement","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0045569 // TRAIL binding // inferred from electronic annotation","chr8:22993100-23021543 (-) // 89.17 // p21.3"]
["11733872_x_at",-0.20188999,-0.1504221,-0.07133865,0.07133865,0.116438866,0.07609749,0.082122035,0.0048386087,-1.1721647,-0.22917527,1.1721647,"down","LOC100652805 /// LOC100653302 /// PGK1","100652805 /// 100653302 /// 5230","0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006096 // glycolysis // inferred from electronic annotation /// 0006096 // glycolysis // traceable author statement /// 0016310 // phosphorylation // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004618 // phosphoglycerate kinase activity // not recorded /// 0004618 // phosphoglycerate kinase activity // inferred from sequence or structural similarity /// 0004618 // phosphoglycerate kinase activity // inferred from electronic annotation /// 0004618 // phosphoglycerate kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chrX:77359665-77382323 (+) // 82.0 // q21.1"]
["11752991_at",-0.14225769,0.021480083,-0.021480083,-0.20254517,0.06797457,0.20857263,0.8349092,0.6093426,-1.051236,-0.07208663,1.051236,"down","HSP90B3P",343477,"0006457 // protein folding // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation","","0005524 // ATP binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr1:92100567-92109335 (+) // 94.13 // p22.1"]
["11758326_s_at",-0.07370663,-0.14811277,-0.17923307,0.330626,0.1070323,0.07370663,0.18042208,0.024558136,-1.2346817,-0.3041392,1.2346817,"down","THEM4",117145,"0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","","chr1:151849535-151881964 (-) // 98.49 // q21.3 /// chr15:55734929-55735594 (-) // 94.86 // q21.3"]
["11724297_a_at",-0.0125722885,-0.03879118,0.0125722885,-0.16268253,0.05828619,0.07610273,0.9886276,0.96646106,-1.0024284,-0.0034992115,1.0024284,"down","BMP7",655,"0001501 // skeletal system development // traceable author statement /// 0001503 // ossification // inferred from electronic annotation /// 0001654 // eye development // inferred from electronic annotation /// 0001656 // metanephros development // inferred from expression pattern /// 0001657 // ureteric bud development // inferred from sequence or structural similarity /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0001707 // mesoderm formation // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001823 // mesonephros development // inferred from expression pattern /// 0001837 // epithelial to mesenchymal transition // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0007411 // axon guidance // inferred from electronic annotation /// 0007435 // salivary gland morphogenesis // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009880 // embryonic pattern specification // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010664 // negative regulation of striated muscle cell apoptotic process // inferred from sequence or structural similarity /// 0010800 // positive regulation of peptidyl-threonine phosphorylation // inferred from direct assay /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // traceable author statement /// 0010942 // positive regulation of cell death // inferred from electronic annotation /// 0016358 // dendrite development // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030501 // positive regulation of bone mineralization // inferred from direct assay /// 0030509 // BMP signaling pathway // inferred from direct assay /// 0030509 // BMP signaling pathway // inferred from electronic annotation /// 0030855 // epithelial cell differentiation // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from sequence or structural similarity /// 0034116 // positive regulation of heterotypic cell-cell adhesion // inferred from direct assay /// 0034504 // protein localization to nucleus // inferred from direct assay /// 0035239 // tube morphogenesis // inferred from electronic annotation /// 0040007 // growth // inferred from electronic annotation /// 0042326 // negative regulation of phosphorylation // inferred from direct assay /// 0042347 // negative regulation of NF-kappaB import into nucleus // inferred from sequence or structural similarity /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // inferred from mutant phenotype /// 0043407 // negative regulation of MAP kinase activity // inferred from direct assay /// 0045597 // positive regulation of cell differentiation // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from direct assay /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // inferred from direct assay /// 0045746 // negative regulation of Notch signaling pathway // inferred from electronic annotation /// 0045786 // negative regulation of cell cycle // inferred from direct assay /// 0045839 // negative regulation of mitosis // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0048468 // cell development // inferred from electronic annotation /// 0048593 // camera-type eye morphogenesis // inferred from electronic annotation /// 0048596 // embryonic camera-type eye morphogenesis // inferred from electronic annotation /// 0048646 // anatomical structure formation involved in morphogenesis // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from electronic annotation /// 0048762 // mesenchymal cell differentiation // inferred from direct assay /// 0048812 // neuron projection morphogenesis // inferred from direct assay /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0050768 // negative regulation of neurogenesis // inferred from electronic annotation /// 0051216 // cartilage development // inferred from electronic annotation /// 0060272 // embryonic skeletal joint morphogenesis // inferred from electronic annotation /// 0060389 // pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0060395 // SMAD protein signal transduction // inferred from direct assay /// 0060445 // branching involved in salivary gland morphogenesis // inferred from electronic annotation /// 0060485 // mesenchyme development // inferred from sequence or structural similarity /// 0060485 // mesenchyme development // inferred from electronic annotation /// 0060548 // negative regulation of cell death // inferred from direct assay /// 0060686 // negative regulation of prostatic bud formation // inferred from electronic annotation /// 0060687 // regulation of branching involved in prostate gland morphogenesis // inferred from electronic annotation /// 0070487 // monocyte aggregation // inferred from direct assay /// 0071456 // cellular response to hypoxia // inferred from sequence or structural similarity /// 0072040 // negative regulation of mesenchymal stem cell apoptotic process involved in nephron morphogenesis // inferred from electronic annotation /// 0072125 // negative regulation of glomerular mesangial cell proliferation // inferred from direct assay /// 0072133 // metanephric mesenchyme morphogenesis // inferred from electronic annotation /// 0072134 // nephrogenic mesenchyme morphogenesis // inferred from electronic annotation /// 0072136 // metanephric mesenchymal cell proliferation involved in metanephros development // inferred from electronic annotation /// 1900006 // positive regulation of dendrite development // inferred from direct assay /// 1900106 // positive regulation of hyaluranon cable assembly // inferred from direct assay /// 2000121 // regulation of removal of superoxide radicals // inferred from sequence or structural similarity","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation","chr20:55743808-55841708 (-) // 89.56 // q13.31"]
["11721212_a_at",0.059479475,-0.13330793,-0.015648842,-0.15457463,0.06818938,0.015648603,0.9815447,0.94655126,-1.0043395,-0.0062469677,1.0043395,"down","THBS4",7060,"0001938 // positive regulation of endothelial cell proliferation // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from expression pattern /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0051451 // myoblast migration // inferred from direct assay /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0071603 // endothelial cell-cell adhesion // inferred from direct assay /// 0090023 // positive regulation of neutrophil chemotaxis // inferred from direct assay","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0031594 // neuromuscular junction // inferred from electronic annotation","0001968 // fibronectin binding // inferred from electronic annotation /// 0005178 // integrin binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005518 // collagen binding // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation /// 0008201 // heparin binding // inferred from direct assay /// 0043237 // laminin-1 binding // inferred from electronic annotation","chr5:79330990-79379110 (+) // 98.43 // q14.1"]
["11735472_a_at",-0.14836931,0.065609455,0.02461195,0.07579374,-0.0729661,-0.02461195,0.9596344,0.88528436,-1.0084372,-0.012121181,1.0084372,"down","CCDC169 /// CCDC169-SOHLH2 /// SOHLH2","100526761 /// 54937 /// 728591","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0048477 // oogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr13:36804911-36871992 (-) // 100.0 // q13.3"]
["11715686_s_at",0.011741638,0.116010666,0.14422607,-0.21300888,-0.13313675,-0.011741638,0.23474918,0.04174586,1.1566523,0.20995528,1.1566523,"up","ARPC5",10092,"0006928 // cellular component movement // traceable author statement /// 0030036 // actin cytoskeleton organization // traceable author statement /// 0030833 // regulation of actin filament polymerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005885 // Arp2/3 protein complex // traceable author statement /// 0015629 // actin cytoskeleton // traceable author statement /// 0042995 // cell projection // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr1:183595327-183605076 (-) // 91.38 // q25.3"]
["11753825_x_at",0.098965645,0.070812225,-0.035071373,-0.19107294,-0.18336058,0.035071373,0.42282403,0.13522322,1.115757,0.15802284,1.115757,"up","FKBP1A",2280,"0000413 // protein peptidyl-prolyl isomerization // inferred from direct assay /// 0000413 // protein peptidyl-prolyl isomerization // traceable author statement /// 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0003007 // heart morphogenesis // inferred from sequence or structural similarity /// 0006457 // protein folding // inferred from electronic annotation /// 0006457 // protein folding // non-traceable author statement /// 0006458 // 'de novo' protein folding // traceable author statement /// 0007165 // signal transduction // inferred from mutant phenotype /// 0007183 // SMAD protein complex assembly // inferred from direct assay /// 0018208 // peptidyl-proline modification // not recorded /// 0022417 // protein maturation by protein folding // traceable author statement /// 0031398 // positive regulation of protein ubiquitination // inferred from direct assay /// 0032092 // positive regulation of protein binding // inferred from direct assay /// 0032513 // negative regulation of protein phosphatase type 2B activity // inferred from direct assay /// 0032925 // regulation of activin receptor signaling pathway // inferred from direct assay /// 0034205 // beta-amyloid formation // inferred from direct assay /// 0042026 // protein refolding // traceable author statement /// 0042110 // T cell activation // non-traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype /// 0043206 // fibril organization // inferred from direct assay /// 0050776 // regulation of immune response // inferred from mutant phenotype /// 0055010 // ventricular cardiac muscle tissue morphogenesis // inferred from sequence or structural similarity /// 0060314 // regulation of ryanodine-sensitive calcium-release channel activity // inferred from direct assay /// 0060314 // regulation of ryanodine-sensitive calcium-release channel activity // inferred from sequence or structural similarity /// 0060347 // heart trabecula formation // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0014802 // terminal cisterna // inferred from sequence or structural similarity /// 0030424 // axon // not recorded /// 0033017 // sarcoplasmic reticulum membrane // not recorded","0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from direct assay /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // traceable author statement /// 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005024 // transforming growth factor beta-activated receptor activity // traceable author statement /// 0005160 // transforming growth factor beta receptor binding // inferred from sequence or structural similarity /// 0005219 // ryanodine-sensitive calcium-release channel activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005527 // macrolide binding // non-traceable author statement /// 0005528 // FK506 binding // inferred from direct assay /// 0005528 // FK506 binding // non-traceable author statement /// 0016853 // isomerase activity // inferred from electronic annotation /// 0034713 // type I transforming growth factor beta receptor binding // inferred from sequence or structural similarity /// 0046332 // SMAD binding // inferred from physical interaction /// 0048185 // activin binding // inferred from physical interaction","chr6:63921461-63921788 (+) // 99.28 // q12 /// chr20:1352755-1373642 (-) // 100.0 // p13"]
["11728376_s_at",-0.1335063,0.004219055,-0.004219055,-0.26687503,0.056576252,0.025995016,0.9603345,0.88746786,1.0118059,0.016932545,1.0118059,"up","NMU",10874,"0001696 // gastric acid secretion // inferred from electronic annotation /// 0006940 // regulation of smooth muscle contraction // traceable author statement /// 0006940 // regulation of smooth muscle contraction // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007586 // digestion // traceable author statement /// 0009648 // photoperiodism // inferred from electronic annotation /// 0019233 // sensory perception of pain // inferred from electronic annotation /// 0042755 // eating behavior // inferred from electronic annotation /// 0045987 // positive regulation of smooth muscle contraction // inferred from electronic annotation /// 0046887 // positive regulation of hormone secretion // inferred from electronic annotation /// 0050806 // positive regulation of synaptic transmission // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0043195 // terminal button // inferred from electronic annotation","0005102 // receptor binding // traceable author statement /// 0042922 // neuromedin U receptor binding // inferred from electronic annotation","chr4:56461397-56502465 (-) // 93.62 // q12"]
["11717341_at",-0.022640228,-0.10444355,-0.23281002,0.24598598,0.069304466,0.022640228,0.29056007,0.06378694,-1.1749572,-0.23260815,1.1749572,"down","PTGFRN",5738,"0034389 // lipid particle organization // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:117452572-117532975 (+) // 96.47 // p13.1"]
["11759881_at",-0.14408922,0.06487608,-0.045751095,-0.16452646,0.16743422,0.045751095,0.8511914,0.63900095,-1.040931,-0.05787442,1.040931,"down","PPIA",5478,"0000413 // protein peptidyl-prolyl isomerization // inferred from direct assay /// 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0002576 // platelet degranulation // traceable author statement /// 0006278 // RNA-dependent DNA replication // traceable author statement /// 0006457 // protein folding // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0019047 // provirus integration // traceable author statement /// 0019059 // initiation of viral infection // traceable author statement /// 0019061 // uncoating of virus // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030260 // entry into host cell // traceable author statement /// 0045069 // regulation of viral genome replication // inferred from mutant phenotype /// 0045069 // regulation of viral genome replication // traceable author statement /// 0050900 // leukocyte migration // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement","0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from direct assay /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016853 // isomerase activity // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation /// 0046790 // virion binding // non-traceable author statement /// 0051082 // unfolded protein binding // traceable author statement","chr11:3913430-3914122 (-) // 75.66 // p15.4"]
["11735609_a_at",-0.11708164,0.041671753,0.49722052,-0.10048175,0.017886877,-0.017887115,0.70632046,0.4054909,1.1282585,0.1740976,1.1282585,"up","FER1L5",90342,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:97308573-97370624 (+) // 99.98 // q11.2"]
["11734876_a_at",-0.036679745,-0.00787878,0.050403595,-0.23637676,0.16843987,0.00787878,0.9511899,0.86414903,1.0153434,0.021967784,1.0153434,"up","TMEM30B",161291,"0070863 // positive regulation of protein exit from endoplasmic reticulum // inferred from direct assay","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr14:61744087-61748558 (-) // 92.78 // q23.1"]
["11721891_at",-0.17641926,-0.015646458,0.015646458,-0.23270082,0.021678448,0.12706709,0.93107504,0.8133594,-1.0215936,-0.03082135,1.0215936,"down","LPHN1",22859,"0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0015643 // toxin binding // inferred from electronic annotation /// 0016524 // latrotoxin receptor activity // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr19:14258548-14316999 (-) // 97.96 // p13.12"]
["11731997_at",-0.35043812,0.013113022,-0.015498161,0.24573612,-0.013113022,0.16846037,0.44034865,0.14635497,-1.190281,-0.25130224,1.190281,"down","TRIM58",25893,"","0005622 // intracellular // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:248020471-248042611 (+) // 61.22 // q44"]
["11725741_x_at",-0.070337296,0.059441566,-0.05659437,-0.52221537,0.05659437,0.08884764,0.850469,0.6378819,1.0740747,0.10309439,1.0740747,"up","SMPDL3B",27293,"0006685 // sphingomyelin catabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0004767 // sphingomyelin phosphodiesterase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation","chr1:28261466-28285663 (+) // 94.1 // p35.3"]
["11751294_a_at",-0.02362442,0.19251847,0.31106853,-0.1295321,-0.040567398,0.02362442,0.40564016,0.124209076,1.1557366,0.2088126,1.1557366,"up","ST6GALNAC5",81849,"0006486 // protein glycosylation // inferred from electronic annotation /// 0006688 // glycosphingolipid biosynthetic process // inferred from sequence or structural similarity /// 0006688 // glycosphingolipid biosynthetic process // inferred from electronic annotation /// 0009312 // oligosaccharide biosynthetic process // inferred from sequence or structural similarity /// 0009312 // oligosaccharide biosynthetic process // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030173 // integral to Golgi membrane // inferred from electronic annotation","0001665 // alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity // inferred from sequence or structural similarity /// 0001665 // alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity // inferred from electronic annotation /// 0008373 // sialyltransferase activity // inferred from sequence or structural similarity /// 0008373 // sialyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr1:77333170-77529522 (+) // 81.07 // p31.1"]
["11717275_s_at",0.2034502,-0.005176544,0.005176544,0.31673813,-0.04393959,-0.14240551,0.95902634,0.88291407,1.0170231,0.02435243,1.0170231,"up","COL5A1",1289,"0001568 // blood vessel development // inferred from electronic annotation /// 0003007 // heart morphogenesis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from mutant phenotype /// 0007411 // axon guidance // traceable author statement /// 0016477 // cell migration // inferred from mutant phenotype /// 0030199 // collagen fibril organization // inferred from mutant phenotype /// 0030199 // collagen fibril organization // non-traceable author statement /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0032964 // collagen biosynthetic process // inferred from mutant phenotype /// 0035313 // wound healing, spreading of epidermal cells // inferred from mutant phenotype /// 0043206 // fibril organization // inferred from mutant phenotype /// 0043588 // skin development // inferred from mutant phenotype /// 0043588 // skin development // inferred from electronic annotation /// 0045112 // integrin biosynthetic process // inferred from mutant phenotype /// 0048592 // eye morphogenesis // inferred from mutant phenotype /// 0051128 // regulation of cellular component organization // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005588 // collagen type V // inferred from mutant phenotype /// 0005588 // collagen type V // traceable author statement /// 0005604 // basement membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from mutant phenotype /// 0031012 // extracellular matrix // inferred from electronic annotation","0005178 // integrin binding // non-traceable author statement /// 0005201 // extracellular matrix structural constituent // inferred from electronic annotation /// 0008201 // heparin binding // inferred from direct assay /// 0008201 // heparin binding // inferred from electronic annotation /// 0043394 // proteoglycan binding // inferred from physical interaction /// 0048407 // platelet-derived growth factor binding // inferred from direct assay","chr9:137533565-137736689 (+) // 98.38 // q34.3"]
["11739947_a_at",0.1646123,-0.06654215,-0.14092779,-0.048945904,0.048945904,0.11383724,0.8517697,0.64015967,-1.0368676,-0.05223171,1.0368676,"down","PFKFB2",5208,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006000 // fructose metabolic process // traceable author statement /// 0006000 // fructose metabolic process // inferred from electronic annotation /// 0006003 // fructose 2,6-bisphosphate metabolic process // inferred from electronic annotation /// 0006006 // glucose metabolic process // traceable author statement /// 0006007 // glucose catabolic process // inferred from electronic annotation /// 0006089 // lactate metabolic process // inferred from electronic annotation /// 0006090 // pyruvate metabolic process // inferred from electronic annotation /// 0006096 // glycolysis // inferred from direct assay /// 0006096 // glycolysis // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0033133 // positive regulation of glucokinase activity // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003873 // 6-phosphofructo-2-kinase activity // inferred from direct assay /// 0003873 // 6-phosphofructo-2-kinase activity // inferred from electronic annotation /// 0003873 // 6-phosphofructo-2-kinase activity // traceable author statement /// 0004331 // fructose-2,6-bisphosphate 2-phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019900 // kinase binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction","chr1:207226592-207254369 (+) // 99.21 // q32.2"]
["11752129_a_at",0.054628372,0.06711769,0.040603638,-0.040603638,-0.23494816,-0.1585083,0.1824602,0.025233565,1.1477458,0.19880322,1.1477458,"up","BIVM-ERCC5 /// ERCC5","100533467 /// 2073","0000718 // nucleotide-excision repair, DNA damage removal // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006283 // transcription-coupled nucleotide-excision repair // inferred from mutant phenotype /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // inferred from electronic annotation /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006295 // nucleotide-excision repair, DNA incision, 3'-to lesion // inferred from direct assay /// 0006295 // nucleotide-excision repair, DNA incision, 3'-to lesion // inferred from mutant phenotype /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0008340 // determination of adult lifespan // inferred from electronic annotation /// 0009411 // response to UV // inferred from direct assay /// 0009411 // response to UV // inferred from mutant phenotype /// 0009411 // response to UV // inferred from electronic annotation /// 0009650 // UV protection // inferred from genetic interaction /// 0009650 // UV protection // inferred from electronic annotation /// 0010225 // response to UV-C // inferred from mutant phenotype /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005675 // holo TFIIH complex // inferred from direct assay /// 0016591 // DNA-directed RNA polymerase II, holoenzyme // inferred from direct assay","0000405 // bubble DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from direct assay /// 0003697 // single-stranded DNA binding // inferred from direct assay /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // traceable author statement /// 0004520 // endodeoxyribonuclease activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction","chr13:103498396-103524611 (+) // 97.64 // q33.1"]
["11717129_s_at",-0.050733566,0.014720917,0.08523941,0.11899948,-0.014720917,-0.12684822,0.91794986,0.7828266,1.0167269,0.023932144,1.0167269,"up","SAR1A",56681,"0006184 // GTP catabolic process // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // non-traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016529 // sarcoplasmic reticulum // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // non-traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation","chr10:71909325-71930279 (-) // 84.52 // q22.1"]
["11740589_s_at",-0.10862541,0.0068035126,0.004509926,-0.02448082,-0.004509926,0.01160717,0.79405093,0.53700316,-1.018639,-0.026642814,1.018639,"down","RYK",6259,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007411 // axon guidance // inferred from sequence or structural similarity /// 0007411 // axon guidance // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0022038 // corpus callosum development // inferred from sequence or structural similarity /// 0022038 // corpus callosum development // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from sequence or structural similarity /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0031175 // neuron projection development // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from direct assay /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0048843 // negative regulation of axon extension involved in axon guidance // inferred from electronic annotation /// 0050919 // negative chemotaxis // inferred from electronic annotation /// 0071679 // commissural neuron axon guidance // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from direct assay /// 0005109 // frizzled binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017147 // Wnt-protein binding // inferred from electronic annotation /// 0042813 // Wnt-activated receptor activity // inferred from electronic annotation","chr3:133875977-133969586 (-) // 92.38 // q22.2"]
["11715690_x_at",0.17695141,-0.10997391,-0.13166714,0.1607399,0.021839142,-0.021839142,0.79872453,0.54470766,-1.0534656,-0.07514321,1.0534656,"down","CD164",8763,"0006955 // immune response // traceable author statement /// 0007155 // cell adhesion // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007157 // heterophilic cell-cell adhesion // inferred from direct assay /// 0007162 // negative regulation of cell adhesion // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0007517 // muscle organ development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // non-traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0030097 // hemopoiesis // non-traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr6:109687716-109703978 (-) // 97.26 // q21"]
["11741555_s_at",-0.18908119,-0.08819008,-0.04823208,0.1534977,0.055090904,0.04823208,0.17388633,0.022824699,-1.1440166,-0.19410801,1.1440166,"down","LIPA /// LOC100507575","100507575 /// 3988","0000902 // cell morphogenesis // inferred from electronic annotation /// 0001816 // cytokine production // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0016125 // sterol metabolic process // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0048771 // tissue remodeling // inferred from electronic annotation /// 0048873 // homeostasis of number of cells within a tissue // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation /// 0005764 // lysosome // traceable author statement","0004771 // sterol esterase activity // inferred from direct assay /// 0004771 // sterol esterase activity // inferred from electronic annotation /// 0016298 // lipase activity // inferred from direct assay /// 0016298 // lipase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation","chr10:90973327-91011660 (-) // 97.23 // q23.31"]
["11758631_s_at",0.066431046,0.031336546,0.25455046,-0.25600934,-0.14207911,-0.031336546,0.2608857,0.05162052,1.1979611,0.26058105,1.1979611,"up","FOXO4",4303,"0000080 // G1 phase of mitotic cell cycle // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007095 // mitotic cell cycle G2/M transition DNA damage checkpoint // not recorded /// 0007095 // mitotic cell cycle G2/M transition DNA damage checkpoint // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007389 // pattern specification process // not recorded /// 0007517 // muscle organ development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009790 // embryo development // not recorded /// 0009888 // tissue development // not recorded /// 0016525 // negative regulation of angiogenesis // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // not recorded /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048513 // organ development // not recorded /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // not recorded /// 0051151 // negative regulation of smooth muscle cell differentiation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // not recorded /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008301 // DNA binding, bending // not recorded /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // not recorded /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chrX:70321367-70323384 (+) // 98.84 // q13.1"]
["11744193_x_at",0.10789585,0.06388855,0.10961628,-0.18623734,-0.06388855,-0.09577465,0.09232898,0.006158351,1.1559671,0.20910035,1.1559671,"up","SUMO1",7341,"0006281 // DNA repair // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016925 // protein sumoylation // inferred from direct assay /// 0016925 // protein sumoylation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0031334 // positive regulation of protein complex assembly // inferred from direct assay /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0032880 // regulation of protein localization // traceable author statement /// 0043392 // negative regulation of DNA binding // inferred from mutant phenotype /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0060021 // palate development // inferred from sequence or structural similarity /// 0060021 // palate development // inferred from electronic annotation /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060334 // regulation of interferon-gamma-mediated signaling pathway // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005643 // nuclear pore // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016604 // nuclear body // inferred from electronic annotation /// 0016605 // PML body // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0019789 // SUMO ligase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr2:203070904-203103322 (-) // 91.91 // q33.1"]
["11761061_at",0.017059326,0.16206837,-0.017059326,-0.14916134,-0.101735115,0.07196331,0.5802446,0.26047447,1.081975,0.11366714,1.081975,"up","UQCRC1",7384,"0006119 // oxidative phosphorylation // traceable author statement /// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0009060 // aerobic respiration // traceable author statement /// 0014823 // response to activity // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0043279 // response to alkaloid // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // traceable author statement","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005746 // mitochondrial respiratory chain // traceable author statement /// 0005750 // mitochondrial respiratory chain complex III // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0008121 // ubiquinol-cytochrome-c reductase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:48641403-48647069 (-) // 99.38 // p21.31"]
["11751683_a_at",0.051095486,0.09092569,0.101442814,-0.051095486,-0.061347008,-0.15805006,0.11716892,0.010143016,1.1260874,0.17131884,1.1260874,"up","RAB11A",8766,"0000910 // cytokinesis // inferred from mutant phenotype /// 0006184 // GTP catabolic process // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from direct assay /// 0031175 // neuron projection development // inferred from mutant phenotype /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048227 // plasma membrane to endosome transport // non-traceable author statement /// 0051223 // regulation of protein transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0072659 // protein localization in plasma membrane // inferred from direct assay","0005739 // mitochondrion // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0032154 // cleavage furrow // inferred from direct assay /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay /// 0055037 // recycling endosome // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019905 // syntaxin binding // non-traceable author statement","chr15:66161793-66180585 (+) // 99.8 // q22.31"]
["11738815_at",0.15675545,0.033625603,-0.18812227,-0.033625603,0.04265642,-0.21910095,0.8341125,0.60804284,1.0502816,0.070776254,1.0502816,"up","EGFR",1956,"0000165 // MAPK cascade // non-traceable author statement /// 0000186 // activation of MAPKK activity // non-traceable author statement /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001503 // ossification // non-traceable author statement /// 0001892 // embryonic placenta development // inferred from electronic annotation /// 0001942 // hair follicle development // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006950 // response to stress // non-traceable author statement /// 0007165 // signal transduction // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from direct assay /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from direct assay /// 0007173 // epidermal growth factor receptor signaling pathway // non-traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from electronic annotation /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007435 // salivary gland morphogenesis // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008544 // epidermis development // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from mutant phenotype /// 0021795 // cerebral cortex cell migration // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0031659 // positive regulation of cyclin-dependent protein kinase activity involved in G1/S // inferred from direct assay /// 0035413 // positive regulation of catenin import into nucleus // inferred from mutant phenotype /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042177 // negative regulation of protein catabolic process // inferred from direct assay /// 0042327 // positive regulation of phosphorylation // inferred from direct assay /// 0043006 // activation of phospholipase A2 activity by calcium-mediated signaling // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from direct assay /// 0045739 // positive regulation of DNA repair // inferred from direct assay /// 0045740 // positive regulation of DNA replication // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048146 // positive regulation of fibroblast proliferation // inferred from electronic annotation /// 0048546 // digestive tract morphogenesis // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from direct assay /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050730 // regulation of peptidyl-tyrosine phosphorylation // inferred from mutant phenotype /// 0050730 // regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050999 // regulation of nitric-oxide synthase activity // inferred from direct assay /// 0051205 // protein insertion into membrane // traceable author statement /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from mutant phenotype /// 0060571 // morphogenesis of an epithelial fold // inferred from electronic annotation /// 0070141 // response to UV-A // inferred from direct assay","0000139 // Golgi membrane // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // non-traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0030122 // AP-2 adaptor complex // traceable author statement /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070435 // Shc-EGFR complex // inferred from sequence or structural similarity","0000166 // nucleotide binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // non-traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004709 // MAP kinase kinase kinase activity // non-traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from mutant phenotype /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // traceable author statement /// 0004716 // receptor signaling protein tyrosine kinase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from direct assay /// 0005006 // epidermal growth factor-activated receptor activity // inferred from direct assay /// 0005006 // epidermal growth factor-activated receptor activity // non-traceable author statement /// 0005006 // epidermal growth factor-activated receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019903 // protein phosphatase binding // inferred from physical interaction /// 0030235 // nitric-oxide synthase regulator activity // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0051015 // actin filament binding // inferred from direct assay","chr7:55086724-55238738 (+) // 96.65 // p11.2"]
["11753382_a_at",-0.21041632,0.01072979,-0.24917793,-0.00096845627,0.00096845627,0.17239285,0.37369937,0.105311476,-1.1543541,-0.20708583,1.1543541,"down","ZC4H2",55906,"","","0046872 // metal ion binding // inferred from electronic annotation","chrX:64137300-64196330 (-) // 100.0 // q11.2"]
["11732621_a_at",-0.0015687943,0.0015687943,-0.0722599,-0.15959167,0.06330061,0.13603115,0.8847685,0.70608395,-1.0262152,-0.037333295,1.0262152,"down","CRB3",92359,"0034329 // cell junction assembly // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement /// 0070830 // tight junction assembly // traceable author statement /// 0072659 // protein localization in plasma membrane // inferred from direct assay","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0017124 // SH3 domain binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction","chr19:6464248-6467228 (+) // 96.64 // p13.3"]
["11726910_x_at",-0.01129818,-0.17240429,-0.1926117,0.09759712,0.01129818,0.021910667,0.27221602,0.05621224,-1.1243101,-0.16904005,1.1243101,"down","MRI1",84245,"0000096 // sulfur amino acid metabolic process // traceable author statement /// 0006595 // polyamine metabolic process // traceable author statement /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009086 // methionine biosynthetic process // inferred from electronic annotation /// 0019509 // L-methionine salvage from methylthioadenosine // not recorded /// 0019509 // L-methionine salvage from methylthioadenosine // inferred from electronic annotation /// 0019509 // L-methionine salvage from methylthioadenosine // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044237 // cellular metabolic process // inferred from electronic annotation /// 0044249 // cellular biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0042995 // cell projection // inferred from electronic annotation","0016853 // isomerase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0046523 // S-methyl-5-thioribose-1-phosphate isomerase activity // not recorded /// 0046523 // S-methyl-5-thioribose-1-phosphate isomerase activity // inferred from electronic annotation","chr19:13875361-13885095 (+) // 38.97 // p13.2"]
["11729067_a_at",-0.51641226,0.007273197,0.03878832,-0.007273197,-0.03973055,0.2894845,0.6355624,0.31764612,-1.1790382,-0.23761041,1.1790382,"down","PM20D1",148811,"0006508 // proteolysis // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:205797153-205819270 (-) // 94.85 // q32.1"]
["11735923_x_at",-0.13582468,0.0024356842,-0.0024356842,-0.20741892,0.25091743,0.46494007,0.6647919,0.35065266,-1.1605064,-0.21475443,1.1605064,"down","AMELY",266,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0031214 // biomineral tissue development // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0044420 // extracellular matrix part // inferred by curator","0030345 // structural constituent of tooth enamel // inferred from direct assay","chrY:6733958-6742068 (-) // 100.0 // p11.2"]
["11715838_a_at",-0.24025059,-0.07992649,-0.09758091,0.10615921,0.07992649,0.13275242,0.11494805,0.009785536,-1.18553,-0.24553211,1.18553,"down","NEU1",4758,"0006665 // sphingolipid metabolic process // traceable author statement /// 0006687 // glycosphingolipid metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005764 // lysosome // traceable author statement /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043202 // lysosomal lumen // traceable author statement /// 0043202 // lysosomal lumen // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0004308 // exo-alpha-sialidase activity // traceable author statement /// 0004308 // exo-alpha-sialidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0052794 // exo-alpha-(2->3)-sialidase activity // inferred from electronic annotation /// 0052795 // exo-alpha-(2->6)-sialidase activity // inferred from electronic annotation /// 0052796 // exo-alpha-(2->8)-sialidase activity // inferred from electronic annotation","chr6:31826829-31830709 (-) // 98.05 // p21.33"]
["11724977_a_at",0.008507252,0.046108723,-0.07140827,-0.008507252,-0.015768528,0.15873003,0.76606816,0.4918103,-1.0355631,-0.05041548,1.0355631,"down","ITGB4",3691,"0007154 // cell communication // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0009611 // response to wounding // inferred from direct assay /// 0031581 // hemidesmosome assembly // inferred from direct assay /// 0031581 // hemidesmosome assembly // traceable author statement /// 0034329 // cell junction assembly // traceable author statement /// 0046847 // filopodium assembly // inferred from electronic annotation /// 0048870 // cell motility // inferred from mutant phenotype","0005604 // basement membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0008305 // integrin complex // inferred from electronic annotation /// 0008305 // integrin complex // traceable author statement /// 0009925 // basal plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030056 // hemidesmosome // inferred from direct assay /// 0030056 // hemidesmosome // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from direct assay","0004872 // receptor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr17:73720775-73753899 (+) // 97.34 // q25.1"]
["11727630_s_at",0.026890755,0.014671326,-0.014671326,-0.111536026,0.05440855,-0.05440855,0.7095081,0.41011107,1.0325004,0.04614232,1.0325004,"up","APBA2",321,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation","0001540 // beta-amyloid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr15:29131174-29410518 (+) // 97.63 // q13.1"]
["11721492_a_at",-0.05401492,0.23029923,0.0061295033,-0.09060955,0.10391307,-0.006129265,0.8316856,0.6017029,1.0413198,0.058413267,1.0413198,"up","ANKRD7",56311,"0008584 // male gonad development // traceable author statement","","","chr7:117864158-117882761 (+) // 77.6 // q31.31"]
["11745824_x_at",-0.30631065,-0.12708616,-0.0053396225,0.0061426163,0.020213127,0.0053396225,0.4424005,0.14773595,-1.1148199,-0.15681064,1.1148199,"down","ACAA1",30,"0000038 // very long-chain fatty acid metabolic process // inferred from mutant phenotype /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006635 // fatty acid beta-oxidation // inferred from mutant phenotype /// 0008152 // metabolic process // inferred from electronic annotation /// 0008206 // bile acid metabolic process // inferred from mutant phenotype /// 0033540 // fatty acid beta-oxidation using acyl-CoA oxidase // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation /// 0005782 // peroxisomal matrix // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003824 // catalytic activity // inferred from electronic annotation /// 0003988 // acetyl-CoA C-acyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016401 // palmitoyl-CoA oxidase activity // inferred from mutant phenotype /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation","chr3:38164206-38178628 (-) // 96.78 // p22.2"]
["11753172_a_at",-0.34614372,-0.008362293,0.10518265,-0.08106184,0.008362293,0.10018206,0.8077581,0.55989516,-1.0660452,-0.092268564,1.0660452,"down","GRB7",2886,"0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0017148 // negative regulation of translation // inferred from sequence or structural similarity /// 0017148 // negative regulation of translation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0034063 // stress granule assembly // inferred from sequence or structural similarity /// 0034063 // stress granule assembly // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0010494 // cytoplasmic stress granule // inferred from sequence or structural similarity /// 0010494 // cytoplasmic stress granule // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from direct assay /// 0035091 // phosphatidylinositol binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction","chr17:37894558-37900857 (+) // 99.74 // q12"]
["11760649_a_at",0.0865407,0.32099915,0.175488,-0.30506945,-0.0865407,-0.09943199,0.17028205,0.021990256,1.2816687,0.35802335,1.2816687,"up","MKNK1",8569,"0006417 // regulation of translation // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr1:47023089-47082515 (-) // 99.93 // p33"]
["11738270_a_at",-0.03851366,-0.08417559,0.03930521,0.03851366,-0.048680305,0.24817324,0.64084643,0.32332322,-1.0770836,-0.107130215,1.0770836,"down","SERP2",387923,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr13:44947886-44971849 (+) // 91.7 // q14.11"]
["11735541_at",-0.12835455,0.083287,-0.04842782,0.093262434,-0.10032344,0.04842782,0.8436489,0.62499964,-1.0316503,-0.044954028,1.0316503,"down","CCDC122",160857,"","","","chr13:44410490-44454599 (-) // 80.6 // q14.11"]
["11745604_x_at",0.06181574,-0.03145361,-0.1748066,0.068790436,-0.068816185,0.031453133,0.7748992,0.50504404,-1.041472,-0.058623996,1.041472,"down","NFKBIB",4793,"0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006351 // transcription, DNA-dependent // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007253 // cytoplasmic sequestering of NF-kappaB // inferred from electronic annotation /// 0008063 // Toll signaling pathway // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0003713 // transcription coactivator activity // traceable author statement /// 0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr19:39390672-39399458 (+) // 96.25 // q13.2"]
["11754940_s_at",0.11809158,0.041682243,0.16099453,-0.041682243,-0.08917713,-0.22806454,0.1867308,0.026356658,1.170045,0.22656403,1.170045,"up","TSN",7247,"0006310 // DNA recombination // traceable author statement /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr2:122523605-122524869 (+) // 82.15 // q14.3"]
["11734199_a_at",-0.37054777,-0.0013496876,0.0013494492,-0.15946293,0.14695191,0.3178773,0.6134229,0.29339236,-1.1690241,-0.22530468,1.1690241,"down","ZNF844",284391,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:12175527-12191178 (+) // 67.75 // p13.2"]
["11721375_a_at",-0.055437565,0.15893221,-0.00027513504,-0.22055006,0.00027513504,0.10369825,0.80752915,0.5594044,1.0520953,0.07326538,1.0520953,"up","BCL2",596,"0000082 // G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 0000209 // protein polyubiquitination // inferred from direct assay /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001101 // response to acid // inferred from electronic annotation /// 0001503 // ossification // inferred from electronic annotation /// 0001541 // ovarian follicle development // inferred from electronic annotation /// 0001656 // metanephros development // inferred from electronic annotation /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0001658 // branching involved in ureteric bud morphogenesis // inferred from electronic annotation /// 0001662 // behavioral fear response // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001776 // leukocyte homeostasis // inferred from electronic annotation /// 0001782 // B cell homeostasis // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001836 // release of cytochrome c from mitochondria // inferred from sequence or structural similarity /// 0001836 // release of cytochrome c from mitochondria // non-traceable author statement /// 0001952 // regulation of cell-matrix adhesion // inferred from electronic annotation /// 0002260 // lymphocyte homeostasis // inferred from electronic annotation /// 0002320 // lymphoid progenitor cell differentiation // inferred from electronic annotation /// 0002326 // B cell lineage commitment // inferred from electronic annotation /// 0002360 // T cell lineage commitment // inferred from electronic annotation /// 0002520 // immune system development // inferred from electronic annotation /// 0003014 // renal system process // inferred from electronic annotation /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006582 // melanin metabolic process // inferred from electronic annotation /// 0006808 // regulation of nitrogen utilization // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from direct assay /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006959 // humoral immune response // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from mutant phenotype /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007015 // actin filament organization // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007565 // female pregnancy // non-traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0007569 // cell aging // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0008219 // cell death // inferred from direct assay /// 0008219 // cell death // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0009314 // response to radiation // non-traceable author statement /// 0009408 // response to heat // inferred from electronic annotation /// 0009605 // response to external stimulus // inferred from electronic annotation /// 0009636 // response to toxin // inferred from direct assay /// 0009636 // response to toxin // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010035 // response to inorganic substance // inferred from electronic annotation /// 0010039 // response to iron ion // inferred from direct assay /// 0010044 // response to aluminum ion // inferred from electronic annotation /// 0010224 // response to UV-B // inferred from electronic annotation /// 0010332 // response to gamma radiation // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010559 // regulation of glycoprotein biosynthetic process // inferred from electronic annotation /// 0014031 // mesenchymal cell development // inferred from electronic annotation /// 0014042 // positive regulation of neuron maturation // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014911 // positive regulation of smooth muscle cell migration // inferred from electronic annotation /// 0016049 // cell growth // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from electronic annotation /// 0018107 // peptidyl-threonine phosphorylation // inferred from electronic annotation /// 0021747 // cochlear nucleus development // inferred from electronic annotation /// 0022612 // gland morphogenesis // inferred from electronic annotation /// 0022898 // regulation of transmembrane transporter activity // inferred from direct assay /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0030183 // B cell differentiation // inferred from electronic annotation /// 0030217 // T cell differentiation // inferred from electronic annotation /// 0030279 // negative regulation of ossification // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from direct assay /// 0030308 // negative regulation of cell growth // inferred from electronic annotation /// 0030318 // melanocyte differentiation // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0030890 // positive regulation of B cell proliferation // inferred from mutant phenotype /// 0031000 // response to caffeine // inferred from electronic annotation /// 0031103 // axon regeneration // inferred from electronic annotation /// 0031647 // regulation of protein stability // inferred from electronic annotation /// 0032835 // glomerulus development // inferred from electronic annotation /// 0032848 // negative regulation of cellular pH reduction // inferred from direct assay /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0032880 // regulation of protein localization // inferred from electronic annotation /// 0033033 // negative regulation of myeloid cell apoptotic process // inferred from electronic annotation /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0033591 // response to L-ascorbic acid // inferred from electronic annotation /// 0033689 // negative regulation of osteoblast proliferation // inferred from electronic annotation /// 0034097 // response to cytokine stimulus // inferred from direct assay /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0034349 // glial cell apoptotic process // inferred from electronic annotation /// 0035094 // response to nicotine // inferred from direct assay /// 0035094 // response to nicotine // inferred from electronic annotation /// 0035265 // organ growth // inferred from electronic annotation /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0040007 // growth // inferred from electronic annotation /// 0040018 // positive regulation of multicellular organism growth // inferred from electronic annotation /// 0042100 // B cell proliferation // inferred from direct assay /// 0042221 // response to chemical stimulus // inferred from electronic annotation /// 0042493 // response to drug // inferred from direct assay /// 0042493 // response to drug // inferred from mutant phenotype /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043029 // T cell homeostasis // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043067 // regulation of programmed cell death // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // inferred from electronic annotation /// 0043375 // CD8-positive, alpha-beta T cell lineage commitment // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0043496 // regulation of protein homodimerization activity // inferred from direct assay /// 0043497 // regulation of protein heterodimerization activity // inferred from direct assay /// 0043524 // negative regulation of neuron apoptotic process // inferred from direct assay /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043583 // ear development // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045636 // positive regulation of melanocyte differentiation // inferred from electronic annotation /// 0045930 // negative regulation of mitotic cell cycle // inferred from electronic annotation /// 0046671 // negative regulation of retinal cell programmed cell death // inferred from electronic annotation /// 0046688 // response to copper ion // inferred from electronic annotation /// 0046902 // regulation of mitochondrial membrane permeability // inferred from sequence or structural similarity /// 0048041 // focal adhesion assembly // inferred from electronic annotation /// 0048066 // developmental pigmentation // inferred from electronic annotation /// 0048070 // regulation of developmental pigmentation // inferred from electronic annotation /// 0048087 // positive regulation of developmental pigmentation // inferred from electronic annotation /// 0048536 // spleen development // inferred from electronic annotation /// 0048538 // thymus development // inferred from electronic annotation /// 0048545 // response to steroid hormone stimulus // inferred from electronic annotation /// 0048546 // digestive tract morphogenesis // inferred from electronic annotation /// 0048589 // developmental growth // inferred from electronic annotation /// 0048599 // oocyte development // inferred from electronic annotation /// 0048709 // oligodendrocyte differentiation // inferred from electronic annotation /// 0048743 // positive regulation of skeletal muscle fiber development // inferred from electronic annotation /// 0048753 // pigment granule organization // inferred from electronic annotation /// 0048873 // homeostasis of number of cells within a tissue // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0050853 // B cell receptor signaling pathway // inferred from mutant phenotype /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051402 // neuron apoptotic process // traceable author statement /// 0051402 // neuron apoptotic process // inferred from electronic annotation /// 0051412 // response to corticosterone stimulus // inferred from electronic annotation /// 0051593 // response to folic acid // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from direct assay /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0051881 // regulation of mitochondrial membrane potential // inferred from sequence or structural similarity /// 0051902 // negative regulation of mitochondrial depolarization // traceable author statement /// 0051924 // regulation of calcium ion transport // inferred from direct assay /// 0070059 // intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from direct assay /// 0071310 // cellular response to organic substance // inferred from electronic annotation /// 0072593 // reactive oxygen species metabolic process // inferred from electronic annotation /// 2001234 // negative regulation of apoptotic signaling pathway // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation /// 0043209 // myelin sheath // inferred from electronic annotation /// 0046930 // pore complex // inferred from direct assay","0002020 // protease binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0015267 // channel activity // inferred from direct assay /// 0019903 // protein phosphatase binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0051400 // BH domain binding // inferred from electronic annotation /// 0051434 // BH3 domain binding // inferred from physical interaction /// 0051721 // protein phosphatase 2A binding // inferred from electronic annotation","chr18:60790581-60987019 (-) // 96.73 // q21.33"]
["11715890_x_at",0.08952713,-0.08628273,-0.13412476,0.29190636,0.077194214,-0.077194214,0.6457159,0.3286709,-1.1026148,-0.14092882,1.1026148,"down","ATP5I",521,"0006200 // ATP catabolic process // inferred from direct assay /// 0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015986 // ATP synthesis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0042776 // mitochondrial ATP synthesis coupled proton transport // inferred by curator /// 0042776 // mitochondrial ATP synthesis coupled proton transport // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046034 // ATP metabolic process // inferred from electronic annotation","0000276 // mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) // inferred from electronic annotation /// 0005739 // mitochondrion // inferred by curator /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0045263 // proton-transporting ATP synthase complex, coupling factor F(o) // inferred from electronic annotation","0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0022857 // transmembrane transporter activity // inferred by curator","chr4:666224-668127 (-) // 69.88 // p16.3"]
["11741639_a_at",-0.046139717,0.10999584,0.11495972,0.046139717,-0.05177498,-0.07845259,0.5685369,0.24920645,1.0626265,0.08763457,1.0626265,"up","DIO2",1734,"0001514 // selenocysteine incorporation // non-traceable author statement /// 0006590 // thyroid hormone generation // traceable author statement /// 0006590 // thyroid hormone generation // inferred from electronic annotation /// 0009409 // response to cold // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042403 // thyroid hormone metabolic process // inferred from direct assay /// 0042404 // thyroid hormone catabolic process // inferred from electronic annotation /// 0042446 // hormone biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred by curator /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004800 // thyroxine 5'-deiodinase activity // inferred from direct assay /// 0004800 // thyroxine 5'-deiodinase activity // traceable author statement /// 0004800 // thyroxine 5'-deiodinase activity // inferred from electronic annotation /// 0008430 // selenium binding // inferred by curator /// 0008430 // selenium binding // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr14:80663869-80677843 (-) // 97.08 // q31.1"]
["11737705_s_at",-0.032607794,0.053099394,-0.0244205,-0.032607794,0.0244205,0.10759711,0.7846672,0.52097154,-1.0241636,-0.034446195,1.0241636,"down","LOC441956",441956,"","","","chr21:15051592-15053459 (-) // 94.97 // q11.2"]
["11745173_a_at",0.026708603,-0.0126514435,0.007852554,-0.007852554,0.14210987,-0.025420189,0.84241575,0.62224317,-1.0202875,-0.028975757,1.0202875,"down","ATF6",22926,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006457 // protein folding // traceable author statement /// 0006950 // response to stress // traceable author statement /// 0006986 // response to unfolded protein // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0006990 // positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003713 // transcription coactivator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr1:161736044-161835750 (+) // 76.51 // q23.3"]
["11743650_s_at",-0.015777588,-0.065891266,-0.032818794,0.16325188,0.07580948,0.015777588,0.264582,0.053028885,-1.0890791,-0.1231088,1.0890791,"down","DEK",7913,"0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0019079 // viral genome replication // traceable author statement /// 2000779 // regulation of double-strand break repair // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0042393 // histone binding // inferred from direct assay","chr6:18224247-18265054 (-) // 96.95 // p22.3"]
["11722908_a_at",0.1884327,-0.0116176605,0.06016922,0.0116176605,-0.106451035,-0.15389252,0.3668424,0.101604834,1.1187621,0.16190334,1.1187621,"up","KLHL13",90293,"0000910 // cytokinesis // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0031463 // Cul3-RING ubiquitin ligase complex // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // inferred from direct assay","chrX:117031775-117107760 (-) // 96.61 // q24"]
["11736322_a_at",-0.251256,-0.020413399,0.020412922,0.21126366,-0.029805183,0.13027,0.46478677,0.16414091,-1.1389163,-0.18766166,1.1389163,"down","BAIAP3",8938,"0007186 // G-protein coupled receptor signaling pathway // inferred from physical interaction /// 0007269 // neurotransmitter secretion // traceable author statement","","0008022 // protein C-terminus binding // traceable author statement","chr16:1384504-1399440 (+) // 97.1 // p13.3"]
["11727575_a_at",-0.17068243,-0.017872334,0.03576994,0.30624485,0.01787281,-0.24599266,0.8701402,0.6760175,-1.0548004,-0.07697001,1.0548004,"down","TMEM237",65062,"0030030 // cell projection organization // inferred from electronic annotation /// 0030111 // regulation of Wnt receptor signaling pathway // inferred from mutant phenotype /// 0030111 // regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from mutant phenotype /// 0042384 // cilium assembly // inferred from electronic annotation","0005929 // cilium // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0035869 // ciliary transition zone // inferred from direct assay /// 0035869 // ciliary transition zone // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","","chr2:202484910-202507686 (-) // 72.55 // q33.1"]
["11752260_a_at",-0.22604632,-0.09774709,0.09774685,-0.25385642,0.09821987,0.17910099,0.8499412,0.6364819,-1.0593435,-0.083170414,1.0593435,"down","TMC3",342125,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr15:81629982-81666497 (-) // 93.69 // q25.1"]
["11745069_a_at",-0.13515282,-0.14280558,0.06144476,0.057785988,0.43687916,-0.05778551,0.5739022,0.25407618,-1.162957,-0.2177977,1.162957,"down","C5orf44",80006,"","","","chr5:64958926-64961899 (+) // 89.97 // q12.3"]
["11748282_a_at",0.14040756,0.01558876,-0.015588284,0.42697716,-0.050970554,-0.036780357,0.885187,0.7069424,-1.0470082,-0.06627268,1.0470082,"down","PPP3CB",5532,"0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006470 // protein dephosphorylation // inferred from sequence or structural similarity /// 0007165 // signal transduction // non-traceable author statement /// 0007612 // learning // traceable author statement /// 0007613 // memory // traceable author statement /// 0016311 // dephosphorylation // traceable author statement /// 0017156 // calcium ion-dependent exocytosis // inferred from sequence or structural similarity /// 0035176 // social behavior // inferred from expression pattern /// 0035690 // cellular response to drug // inferred from direct assay /// 0035774 // positive regulation of insulin secretion involved in cellular response to glucose stimulus // inferred from sequence or structural similarity /// 0042098 // T cell proliferation // non-traceable author statement /// 0042110 // T cell activation // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement /// 0048167 // regulation of synaptic plasticity // traceable author statement /// 0048675 // axon extension // traceable author statement /// 0050796 // regulation of insulin secretion // inferred from sequence or structural similarity","0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005955 // calcineurin complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // non-traceable author statement /// 0005509 // calcium ion binding // inferred from direct assay /// 0005516 // calmodulin binding // inferred from direct assay /// 0005516 // calmodulin binding // non-traceable author statement /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0008144 // drug binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from direct assay /// 0030346 // protein phosphatase 2B binding // inferred from direct assay /// 0033192 // calmodulin-dependent protein phosphatase activity // inferred from sequence or structural similarity /// 0033192 // calmodulin-dependent protein phosphatase activity // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from physical interaction","chr10:75196996-75226245 (-) // 98.36 // q22.2"]
["11728165_a_at",-0.11958027,0.3556521,0.18148708,-0.09160185,-0.08807516,0.08807516,0.64108557,0.32377288,1.1248404,0.16972029,1.1248404,"up","SPINLW1 /// SPINLW1-WFDC6","100526773 /// 57119","0006508 // proteolysis // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr20:44169549-44175016 (-) // 46.5 // q13.12"]
["11760927_a_at",0.002562046,0.19707108,0.097139835,-0.03738737,-0.0025615692,-0.043754578,0.34986427,0.092455216,1.0918884,0.12682544,1.0918884,"up","LRCH3",84859,"","0005576 // extracellular region // inferred from electronic annotation","","chr3:197518109-197610643 (+) // 99.4 // q29"]
["11762829_at",-0.23037863,-0.0063300133,0.1098609,-0.24552774,0.0063300133,0.2417779,0.93182,0.8148591,-1.0303558,-0.043142628,1.0303558,"down","LOC100506242",100506242,"","","","chr1:180138711-180139938 (+) // 98.94 // q25.2"]
["11725481_a_at",-0.25751305,0.06302595,-0.05108261,-0.17908382,0.05108261,0.13155937,0.8097983,0.56383234,-1.0592496,-0.08304264,1.0592496,"down","CD27",939,"0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from direct assay /// 0006916 // anti-apoptosis // inferred from sequence or structural similarity /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006917 // induction of apoptosis // inferred from sequence or structural similarity /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // non-traceable author statement /// 0008588 // release of cytoplasmic sequestered NF-kappaB // non-traceable author statement /// 0016064 // immunoglobulin mediated immune response // non-traceable author statement /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045579 // positive regulation of B cell differentiation // non-traceable author statement /// 0046330 // positive regulation of JNK cascade // inferred from sequence or structural similarity /// 0046330 // positive regulation of JNK cascade // inferred from electronic annotation","0005576 // extracellular region // non-traceable author statement /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043027 // cysteine-type endopeptidase inhibitor activity involved in apoptotic process // inferred from direct assay","chr12:6554005-6560879 (+) // 98.05 // p13.31"]
["11747748_a_at",0.032292843,-0.032292843,0.2666254,-0.16025591,0.048947334,-0.08214092,0.55184954,0.23365054,1.1121553,0.15335828,1.1121553,"up","ETV1",2115,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0048935 // peripheral nervous system neuron development // traceable author statement","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr7:13935307-14026086 (-) // 98.49 // p21.2"]
["11753489_a_at",-0.09149456,-0.25027466,-0.25895882,0.3315544,0.16276932,0.09149456,0.12408652,0.011565418,-1.3154126,-0.39551544,1.3154126,"down","EED",8726,"0006349 // regulation of gene expression by genetic imprinting // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016571 // histone methylation // inferred from direct assay /// 0016571 // histone methylation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // non-traceable author statement","0001739 // sex chromatin // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0035098 // ESC/E(Z) complex // inferred from direct assay /// 0035098 // ESC/E(Z) complex // inferred from electronic annotation /// 0045120 // pronucleus // inferred from electronic annotation","0003682 // chromatin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042054 // histone methyltransferase activity // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction","chr11:85956265-85988054 (+) // 99.75 // q14.2"]
["11736030_a_at",0.03343773,0.0004749298,0.0076093674,-0.0004749298,-0.3489504,-0.09860706,0.5019997,0.1924858,1.1197563,0.16318484,1.1197563,"up","SLC16A3",9123,"0006090 // pyruvate metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0015711 // organic anion transport // inferred from electronic annotation /// 0015718 // monocarboxylic acid transport // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay","0008028 // monocarboxylic acid transmembrane transporter activity // traceable author statement /// 0015293 // symporter activity // inferred from electronic annotation /// 0015355 // secondary active monocarboxylate transmembrane transporter activity // inferred from electronic annotation","chr17:80193855-80197354 (+) // 93.66 // q25.3"]
["11759273_x_at",0.35773945,0.04770565,0.5365796,-0.19203639,-0.07990956,-0.047705412,0.2515027,0.048034377,1.3384458,0.4205587,1.3384458,"up","HIST1H2BC /// HIST1H2BE /// HIST1H2BF /// HIST1H2BG /// HIST1H2BI","8339 /// 8343 /// 8344 /// 8346 /// 8347","0006334 // nucleosome assembly // non-traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation","0000786 // nucleosome // non-traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr6:26273143-26273640 (+) // 100.0 // p22.2"]
["11720863_at",0.04894638,0.01896,0.091656685,-0.01896,-0.026239395,-0.06001568,0.17435022,0.02298935,1.0630867,0.088259324,1.0630867,"up","PNPLA4",8228,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation","","0004806 // triglyceride lipase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0050253 // retinyl-palmitate esterase activity // inferred from electronic annotation","chrX:7866803-7895477 (-) // 83.75 // p22.31"]
["11749228_a_at",-0.18208027,0.031829834,0.039675713,-0.031829834,0.08297825,-0.056319237,0.8806532,0.6985214,-1.0246525,-0.03513469,1.0246525,"down","TMEM30A",55754,"0036010 // protein localization in endosome // inferred from mutant phenotype /// 0070863 // positive regulation of protein exit from endoplasmic reticulum // inferred from direct assay","0005783 // endoplasmic reticulum // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr6:75965367-75994502 (-) // 93.61 // q14.1"]
["11716184_s_at",-0.18106079,-0.22089672,-0.10874748,0.15983582,0.1283989,0.10874748,0.042438295,0.0011014454,-1.233333,-0.30256236,1.233333,"down","ALCAM",214,"0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from electronic annotation","0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0005102 // receptor binding // traceable author statement","chr3:105085712-105295746 (+) // 96.66 // q13.11"]
["11727671_a_at",0.32369423,0.22560167,0.35551023,-0.6846194,-0.30461073,-0.22560167,0.108246,0.008603579,1.6318924,0.70654595,1.6318924,"up","SYT17",51760,"0006810 // transport // inferred from electronic annotation","0005802 // trans-Golgi network // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation","chr16:19179534-19279656 (+) // 91.6 // p12.3"]
["11724241_at",-0.19884753,0.04126501,0.08026528,-0.077317715,0.07981396,-0.04126501,0.9653012,0.90335155,-1.0089464,-0.01284956,1.0089464,"down","TCF4",6925,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006352 // transcription initiation, DNA-dependent // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0007399 // nervous system development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0065004 // protein-DNA complex assembly // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from sequence or structural similarity /// 0005667 // transcription factor complex // inferred from electronic annotation","0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from sequence or structural similarity /// 0001011 // sequence-specific DNA binding RNA polymerase recruiting transcription factor activity // inferred from sequence or structural similarity /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from sequence or structural similarity /// 0001087 // TFIIB-class binding transcription factor activity // inferred from sequence or structural similarity /// 0001093 // TFIIB-class transcription factor binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from sequence or structural similarity /// 0046982 // protein heterodimerization activity // non-traceable author statement /// 0070888 // E-box binding // inferred from sequence or structural similarity","chr18:52889564-53255860 (-) // 95.08 // q21.2"]
["11741178_a_at",0.13661122,0.010510445,0.16558838,-0.010510445,-0.014622211,-0.10823202,0.2820333,0.060395446,1.1085637,0.14869162,1.1085637,"up","UPB1",51733,"0006206 // pyrimidine base metabolic process // traceable author statement /// 0006807 // nitrogen compound metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0019483 // beta-alanine biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046135 // pyrimidine nucleoside catabolic process // traceable author statement /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0003837 // beta-ureidopropionase activity // not recorded /// 0003837 // beta-ureidopropionase activity // inferred from electronic annotation /// 0003837 // beta-ureidopropionase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016810 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr22:24891114-24922552 (+) // 71.56 // q11.23"]
["11746802_x_at",0.022616386,-0.01582241,0.01582241,0.031287193,-0.11829853,-0.19079018,0.518924,0.20627508,1.071877,0.100139365,1.071877,"up","BNIP3L",665,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0008634 // negative regulation of survival gene product expression // inferred from direct assay /// 0035694 // mitochondrial protein catabolic process // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005740 // mitochondrial envelope // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from mutant phenotype /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031224 // intrinsic to membrane // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0005521 // lamin binding // inferred from direct assay /// 0005521 // lamin binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay","chr8:26240552-26268534 (+) // 98.94 // p21.2"]
["11732426_a_at",0.24733186,-0.043806314,-0.002380848,0.0023806095,0.086406946,-0.06974411,0.820343,0.582069,1.042972,0.060700383,1.042972,"up","GNA14",9630,"0006184 // GTP catabolic process // traceable author statement /// 0006471 // protein ADP-ribosylation // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // not recorded /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0060158 // phospholipase C-activating dopamine receptor signaling pathway // not recorded","0005834 // heterotrimeric G-protein complex // not recorded /// 0005834 // heterotrimeric G-protein complex // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0031234 // extrinsic to internal side of plasma membrane // not recorded","0000166 // nucleotide binding // inferred from electronic annotation /// 0001664 // G-protein coupled receptor binding // not recorded /// 0003924 // GTPase activity // traceable author statement /// 0004871 // signal transducer activity // not recorded /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004871 // signal transducer activity // non-traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // not recorded /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:80037512-80263664 (-) // 98.65 // q21.2"]
["11745158_x_at",0.47778225,0.127841,0.08329773,-0.08329773,-0.32540607,-0.51182556,0.22292861,0.03804404,1.4504328,0.5364834,1.4504328,"up","MUC1",4582,"0006916 // anti-apoptosis // inferred from direct assay /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // inferred from direct assay /// 0006978 // DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator // inferred from direct assay /// 0010944 // negative regulation of transcription by competitive promoter binding // inferred from direct assay /// 0016266 // O-glycan processing // traceable author statement /// 0036003 // positive regulation of transcription from RNA polymerase II promoter in response to stress // inferred from direct assay /// 0043618 // regulation of transcription from RNA polymerase II promoter in response to stress // inferred from direct assay /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0090240 // positive regulation of histone H4 acetylation // inferred from direct assay","0000790 // nuclear chromatin // inferred from direct assay /// 0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005796 // Golgi lumen // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // not recorded /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // not recorded /// 0016324 // apical plasma membrane // inferred from electronic annotation","0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0002039 // p53 binding // inferred from physical interaction /// 0003712 // transcription cofactor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr1:155158423-155162684 (-) // 100.0 // q22"]
["11722098_a_at",-0.31069517,0.12726784,0.019216537,-0.54565144,0.054389954,-0.019216537,0.8531433,0.6426091,1.0832921,0.11542234,1.0832921,"up","RICTOR",253260,"0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009790 // embryo development // inferred from sequence or structural similarity /// 0009790 // embryo development // inferred from electronic annotation /// 0030838 // positive regulation of actin filament polymerization // inferred from electronic annotation /// 0031295 // T cell costimulation // traceable author statement /// 0031532 // actin cytoskeleton reorganization // inferred from mutant phenotype /// 0032008 // positive regulation of TOR signaling cascade // inferred from mutant phenotype /// 0032314 // regulation of Rac GTPase activity // inferred from electronic annotation /// 0032956 // regulation of actin cytoskeleton organization // inferred from mutant phenotype /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0051896 // regulation of protein kinase B signaling cascade // inferred from direct assay /// 0051896 // regulation of protein kinase B signaling cascade // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0031932 // TORC2 complex // inferred from direct assay /// 0031932 // TORC2 complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0043022 // ribosome binding // inferred from electronic annotation","chr5:38938021-39074503 (-) // 97.8 // p13.1"]
["11761794_x_at",0.031853676,0.013491154,-0.17709255,-0.13724709,-0.013491154,0.042510986,0.9759644,0.93121606,-1.0054492,-0.007840157,1.0054492,"down","FAM122C",159091,"","","","chrX:133941299-133955985 (+) // 83.02 // q26.3"]
["11732234_a_at",0.12321615,-0.03878832,0.29372358,-0.08813524,0.03878832,-0.1131773,0.46873882,0.16710238,1.1330607,0.18022513,1.1330607,"up","RND1",27289,"0006184 // GTP catabolic process // non-traceable author statement /// 0007015 // actin filament organization // inferred from direct assay /// 0007162 // negative regulation of cell adhesion // inferred from direct assay /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0016322 // neuron remodeling // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005912 // adherens junction // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // non-traceable author statement /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation","chr12:49250931-49259681 (-) // 97.96 // q13.12"]
["11717396_a_at",0.185565,-0.011145592,0.011145592,0.038318634,-0.20370197,-0.22956657,0.43128994,0.14075096,1.1435385,0.1935049,1.1435385,"up","CHTF8",54921,"0006260 // DNA replication // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr16:68973480-69155398 (-) // 95.1 // q22.1"]
["11731720_at",-0.28476787,0.22624111,0.16169262,-0.46651983,0.019006252,-0.019006252,0.73420775,0.44407132,1.1406809,0.18989527,1.1406809,"up","LURAP1",541468,"0001819 // positive regulation of cytokine production // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","","chr1:46669005-46687158 (+) // 83.24 // p34.1"]
["11759378_at",-0.32820797,-0.13355827,-0.42355347,0.2654643,0.13355827,0.28247404,0.08991102,0.005848964,-1.4362154,-0.5222721,1.4362154,"down","NHSL2",340527,"","","","chrX:71353497-71361212 (+) // 99.3 // q13.1"]
["11728541_s_at",-0.21373796,-0.0050263405,0.03584242,-0.30256367,0.0050263405,0.017792702,0.9324228,0.81636816,1.022623,0.0322743,1.022623,"up","MDGA1",266727,"0001764 // neuron migration // inferred from sequence or structural similarity /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007420 // brain development // inferred from sequence or structural similarity /// 0007420 // brain development // inferred from electronic annotation /// 0021527 // spinal cord association neuron differentiation // inferred from sequence or structural similarity /// 0021527 // spinal cord association neuron differentiation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation /// 0046658 // anchored to plasma membrane // inferred from direct assay /// 0046658 // anchored to plasma membrane // inferred from sequence or structural similarity /// 0046658 // anchored to plasma membrane // inferred from electronic annotation","","chr6:37600292-37665766 (-) // 93.0 // p21.2"]
["11741765_a_at",-0.09084463,0.13080311,-0.039307594,-0.36379337,0.039307594,0.15788269,0.9098311,0.7614119,1.0394002,0.055751268,1.0394002,"up","METTL20",254013,"0006479 // protein methylation // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0008168 // methyltransferase activity // inferred from electronic annotation /// 0008276 // protein methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr12:31800090-31821817 (+) // 67.24 // p11.21"]
["11720384_at",-0.2877779,-0.30076313,-0.25898552,0.25898552,0.34153843,0.38381386,0.018006893,9.405361e-5,-1.5269167,-0.6106214,1.5269167,"down","STX6",10228,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006906 // vesicle fusion // inferred from physical interaction /// 0007032 // endosome organization // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0042147 // retrograde transport, endosome to Golgi // inferred from mutant phenotype /// 0048193 // Golgi vesicle transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // traceable author statement /// 0032588 // trans-Golgi network membrane // inferred from sequence or structural similarity /// 0032588 // trans-Golgi network membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005484 // SNAP receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:180941851-180992257 (-) // 97.46 // q25.3"]
["11730642_at",-0.005788803,-0.040644884,0.005788803,0.036250353,0.12247944,-0.39013147,0.88624316,0.7097944,1.0450599,0.06358566,1.0450599,"up","CXorf48",54967,"","","","chrX:134290460-134305751 (-) // 86.07 // q26.3"]
["11717826_x_at",0.21115065,0.022743702,-0.022743702,-0.076651335,-0.031362057,0.15298438,0.83532023,0.6101259,1.0391423,0.055393163,1.0391423,"up","STMN2",11075,"0007026 // negative regulation of microtubule depolymerization // inferred from direct assay /// 0010976 // positive regulation of neuron projection development // inferred from direct assay /// 0010977 // negative regulation of neuron projection development // inferred from direct assay /// 0030182 // neuron differentiation // non-traceable author statement /// 0031115 // negative regulation of microtubule polymerization // inferred from direct assay /// 0031117 // positive regulation of microtubule depolymerization // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0031982 // vesicle // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr8:80523048-80578397 (+) // 92.49 // q21.13"]
["11759396_a_at",0.03261137,-0.03261137,-0.14924526,0.041897297,-0.044225693,0.07336092,0.63198215,0.3135976,-1.0522124,-0.0734259,1.0522124,"down","BTN2A3P",54718,"","0016021 // integral to membrane // inferred from electronic annotation","","chr6:26422346-26431843 (+) // 100.0 // p22.2"]
["11718709_a_at",0.19824028,-0.17732143,-0.04065466,0.32491493,0.040655136,-0.0586915,0.7907279,0.5309459,-1.0783844,-0.10887153,1.0783844,"down","TBC1D9B",23061,"0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation","chr5:179289065-179334881 (-) // 94.81 // q35.3"]
["11756889_s_at",-0.014078379,0.014078617,0.12748551,-0.3150251,-0.12395811,0.22484112,0.7872782,0.52534425,1.0821316,0.11387599,1.0821316,"up","SNAP91",9892,"0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0030100 // regulation of endocytosis // inferred from electronic annotation /// 0048268 // clathrin coat assembly // inferred from electronic annotation /// 0051223 // regulation of protein transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030118 // clathrin coat // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation /// 0005545 // 1-phosphatidylinositol binding // inferred from electronic annotation /// 0030276 // clathrin binding // inferred from electronic annotation","chr6:84262619-84417677 (-) // 91.64 // q14.2"]
["11733207_a_at",0.04242134,-0.32806492,-0.14757824,0.33873987,0.09452963,-0.042421818,0.44556454,0.15002793,-1.209734,-0.27468982,1.209734,"down","ZNF480",147657,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:52800420-52826572 (+) // 39.83 // q13.41"]
["11719541_a_at",-0.10364437,-0.045025826,0.076971054,-0.013427734,0.107460976,0.013427734,0.7078425,0.40757456,-1.0422635,-0.05972007,1.0422635,"down","GCFC1",94104,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation","chr21:34106209-34144173 (-) // 98.03 // q22.11"]
["11755665_x_at",0.06444168,0.01722908,-0.014453411,0.007956028,-0.014844418,-0.007955551,0.6341925,0.3161611,1.0191411,0.027353775,1.0191411,"up","VARS2",57176,"0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006418 // tRNA aminoacylation for protein translation // inferred from electronic annotation /// 0006438 // valyl-tRNA aminoacylation // inferred from electronic annotation /// 0006450 // regulation of translational fidelity // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0002161 // aminoacyl-tRNA editing activity // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004832 // valine-tRNA ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation","chr6:30886338-30894233 (+) // 92.82 // p21.33"]
["11728246_at",0.021485806,0.2683158,0.24307871,-0.13943386,-0.17791605,-0.021485806,0.21047345,0.033616632,1.2231251,0.29057196,1.2231251,"up","FAM134A",79137,"","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:220042938-220050201 (+) // 79.33 // q35"]
["11745944_s_at",0.011540413,-0.011540413,0.033117294,-0.05332184,-0.12870407,0.030220985,0.5857009,0.2656524,1.043652,0.061640814,1.043652,"up","CHPF",79586,"","0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0016740 // transferase activity // inferred from electronic annotation /// 0016758 // transferase activity, transferring hexosyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047238 // glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity // inferred from electronic annotation /// 0050510 // N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity // inferred from electronic annotation","chr2:220404093-220407819 (-) // 99.64 // q35"]
["11740999_a_at",0.28850627,0.2587571,-0.07085228,-0.111690044,-0.12064648,0.07085228,0.48529974,0.1797922,1.1588001,0.21263175,1.1588001,"up","GAP43",2596,"0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0009611 // response to wounding // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0040008 // regulation of growth // inferred from electronic annotation /// 0051489 // regulation of filopodium assembly // inferred from direct assay","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031527 // filopodium membrane // inferred from direct assay /// 0031527 // filopodium membrane // inferred from electronic annotation /// 0032584 // growth cone membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation","chr3:115342150-115440334 (+) // 75.53 // q13.31"]
["11742455_a_at",0.024961472,0.049922705,0.027043343,-0.024961472,-0.049922705,-0.027043343,0.074881524,0.0038610192,1.0482273,0.067951605,1.0482273,"up","DPF3",8110,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0071565 // nBAF complex // inferred from sequence or structural similarity","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:73136659-73360809 (-) // 98.94 // q24.2"]
["11718635_at",0.10001755,0.16113663,0.15482235,-0.23411465,-0.11849785,-0.10001755,0.06937845,0.0033159473,1.2222468,0.28953558,1.2222468,"up","KIF1B",23095,"0006200 // ATP catabolic process // inferred from sequence or structural similarity /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007018 // microtubule-based movement // inferred from sequence or structural similarity /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0007270 // neuron-neuron synaptic transmission // inferred from sequence or structural similarity /// 0007270 // neuron-neuron synaptic transmission // inferred from electronic annotation /// 0007274 // neuromuscular synaptic transmission // inferred from sequence or structural similarity /// 0007274 // neuromuscular synaptic transmission // inferred from electronic annotation /// 0008089 // anterograde axon cargo transport // inferred from sequence or structural similarity /// 0008089 // anterograde axon cargo transport // inferred from electronic annotation /// 0030705 // cytoskeleton-dependent intracellular transport // inferred from sequence or structural similarity /// 0030705 // cytoskeleton-dependent intracellular transport // inferred from electronic annotation /// 0047497 // mitochondrion transport along microtubule // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005875 // microtubule associated complex // inferred from sequence or structural similarity /// 0005875 // microtubule associated complex // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from sequence or structural similarity /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from sequence or structural similarity /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043005 // neuron projection // inferred from sequence or structural similarity","0000166 // nucleotide binding // inferred from electronic annotation /// 0003777 // microtubule motor activity // inferred from sequence or structural similarity /// 0003777 // microtubule motor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from sequence or structural similarity /// 0016887 // ATPase activity // inferred from electronic annotation /// 0019894 // kinesin binding // traceable author statement","chr1:10270763-10368652 (+) // 90.43 // p36.22"]
["11738079_at",0.23229408,0.08739948,-0.6463747,-0.32407093,0.12263298,-0.08739948,0.9892214,0.96858305,-1.0087821,-0.012614651,1.0087821,"down","NR2E3",10002,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007601 // visual perception // inferred from electronic annotation /// 0007601 // visual perception // traceable author statement /// 0007602 // phototransduction // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0030522 // intracellular receptor mediated signaling pathway // traceable author statement /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:72102885-72107270 (+) // 88.82 // q23"]
["11725327_a_at",0.12591934,0.018666744,-0.017152786,0.017152786,-0.053878784,-0.09724331,0.49140328,0.18447165,1.062258,0.08713421,1.062258,"up","CAMK2D",817,"0001558 // regulation of cell growth // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0008016 // regulation of heart contraction // traceable author statement /// 0010613 // positive regulation of cardiac muscle hypertrophy // inferred from mutant phenotype /// 0010881 // regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0060314 // regulation of ryanodine-sensitive calcium-release channel activity // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060341 // regulation of cellular localization // inferred from mutant phenotype","0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005954 // calcium- and calmodulin-dependent protein kinase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016529 // sarcoplasmic reticulum // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0033017 // sarcoplasmic reticulum membrane // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004683 // calmodulin-dependent protein kinase activity // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr4:114372189-114683202 (-) // 84.34 // q26"]
["11734301_at",0.0041131973,-0.11020708,-0.28546715,0.11125946,-0.0041131973,0.10042572,0.3550106,0.09545766,-1.1484683,-0.19971098,1.1484683,"down","MBL2",4153,"0001867 // complement activation, lectin pathway // inferred from direct assay /// 0001867 // complement activation, lectin pathway // inferred from physical interaction /// 0001867 // complement activation, lectin pathway // traceable author statement /// 0001867 // complement activation, lectin pathway // inferred from electronic annotation /// 0006953 // acute-phase response // traceable author statement /// 0006956 // complement activation // traceable author statement /// 0006958 // complement activation, classical pathway // inferred from electronic annotation /// 0006979 // response to oxidative stress // non-traceable author statement /// 0008228 // opsonization // traceable author statement /// 0044130 // negative regulation of growth of symbiont in host // inferred from direct assay /// 0044130 // negative regulation of growth of symbiont in host // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0050766 // positive regulation of phagocytosis // inferred from electronic annotation /// 0050830 // defense response to Gram-positive bacterium // inferred from direct assay /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation /// 0051873 // killing by host of symbiont cells // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement","0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005537 // mannose binding // non-traceable author statement /// 0005537 // mannose binding // traceable author statement /// 0005537 // mannose binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0043499 // eukaryotic cell surface binding // traceable author statement /// 0048306 // calcium-dependent protein binding // inferred from physical interaction /// 0051635 // bacterial cell surface binding // traceable author statement","chr10:54526872-54531460 (-) // 30.64 // q21.1"]
["11733687_s_at",0.04412937,0.04022503,-0.13931274,-0.085621834,0.033825874,-0.033825874,0.96153915,0.8904948,1.0071099,0.010221097,1.0071099,"up","STRA6",64220,"0001568 // blood vessel development // inferred from mutant phenotype /// 0001822 // kidney development // inferred from mutant phenotype /// 0003184 // pulmonary valve morphogenesis // inferred from mutant phenotype /// 0003281 // ventricular septum development // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0007507 // heart development // inferred from mutant phenotype /// 0007612 // learning // inferred from mutant phenotype /// 0007631 // feeding behavior // inferred from mutant phenotype /// 0030324 // lung development // inferred from mutant phenotype /// 0030325 // adrenal gland development // inferred from mutant phenotype /// 0030540 // female genitalia development // inferred from mutant phenotype /// 0042297 // vocal learning // inferred from mutant phenotype /// 0043583 // ear development // inferred from mutant phenotype /// 0043585 // nose morphogenesis // inferred from mutant phenotype /// 0048286 // lung alveolus development // inferred from mutant phenotype /// 0048520 // positive regulation of behavior // inferred from mutant phenotype /// 0048546 // digestive tract morphogenesis // inferred from mutant phenotype /// 0048566 // embryonic digestive tract development // inferred from mutant phenotype /// 0048589 // developmental growth // inferred from mutant phenotype /// 0048745 // smooth muscle tissue development // inferred from mutant phenotype /// 0048844 // artery morphogenesis // inferred from mutant phenotype /// 0050890 // cognition // inferred from mutant phenotype /// 0050905 // neuromuscular process // inferred from mutant phenotype /// 0060322 // head development // inferred from mutant phenotype /// 0060323 // head morphogenesis // inferred from mutant phenotype /// 0060325 // face morphogenesis // inferred from mutant phenotype /// 0060426 // lung vasculature development // inferred from mutant phenotype /// 0060539 // diaphragm development // inferred from mutant phenotype /// 0060900 // embryonic camera-type eye formation // inferred from mutant phenotype /// 0061029 // eyelid development in camera-type eye // inferred from mutant phenotype /// 0061038 // uterus morphogenesis // inferred from mutant phenotype /// 0061143 // alveolar primary septum development // inferred from mutant phenotype /// 0061156 // pulmonary artery morphogenesis // inferred from mutant phenotype /// 0061205 // paramesonephric duct development // inferred from mutant phenotype","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0004872 // receptor activity // inferred from electronic annotation","chr15:74471809-74501371 (-) // 98.94 // q24.1"]
["11753634_a_at",-0.24981976,0.21297836,0.25780916,-0.30969095,-0.08579922,0.08579922,0.71878445,0.4234127,1.1304414,0.17688625,1.1304414,"up","MED24",9862,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016573 // histone acetylation // inferred from electronic annotation /// 0030518 // intracellular steroid hormone receptor signaling pathway // inferred from direct assay /// 0030521 // androgen receptor signaling pathway // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0051291 // protein heterooligomerization // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016592 // mediator complex // non-traceable author statement /// 0016592 // mediator complex // inferred from electronic annotation","0001104 // RNA polymerase II transcription cofactor activity // inferred from direct assay /// 0003712 // transcription cofactor activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // non-traceable author statement /// 0042809 // vitamin D receptor binding // non-traceable author statement /// 0046966 // thyroid hormone receptor binding // inferred from direct assay","chr17:38175381-38209868 (-) // 91.84 // q21.1"]
["11749610_a_at",0.066352844,-0.1882124,-0.057782173,0.10371208,0.057782173,-0.08727932,0.7137014,0.4159538,-1.0604075,-0.08461881,1.0604075,"down","CD58",965,"0007155 // cell adhesion // non-traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0016337 // cell-cell adhesion // non-traceable author statement /// 0050900 // leukocyte migration // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:117064059-117113661 (-) // 97.12 // p13.1"]
["11761354_at",0.02132225,-0.09938145,0.11134148,-0.021322727,-0.124825,0.1082778,0.92854017,0.8071598,1.0165756,0.023717472,1.0165756,"up","LOC100289409",100289409,"","","","chr9:140475535-140476950 (+) // 100.0 // q34.3"]
["11763027_x_at",-0.16599703,-0.013163567,0.18573856,0.01316309,-0.018949032,0.053299427,0.9649277,0.9019016,-1.009503,-0.0136452075,1.009503,"down","HFE",3077,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // inferred from electronic annotation /// 0006461 // protein complex assembly // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006826 // iron ion transport // traceable author statement /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0006898 // receptor-mediated endocytosis // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0007565 // female pregnancy // inferred from electronic annotation /// 0010106 // cellular response to iron ion starvation // inferred from electronic annotation /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0042446 // hormone biosynthetic process // inferred from electronic annotation /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0060586 // multicellular organismal iron ion homeostasis // inferred from electronic annotation","0005737 // cytoplasm // traceable author statement /// 0005769 // early endosome // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from direct assay /// 0042612 // MHC class I protein complex // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation /// 0045178 // basal part of cell // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0055037 // recycling endosome // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr6:26091323-26096817 (+) // 93.73 // p22.2"]
["11740048_a_at",-0.06873131,-0.16975975,0.10014105,0.19704676,0.06873131,-0.2728424,0.92470264,0.798994,-1.0307982,-0.043761916,1.0307982,"down","ZNF461",92283,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:37128282-37157755 (-) // 89.38 // q13.12"]
["11723752_s_at",0.0073537827,0.29681897,-0.02730751,0.028164387,-0.07128453,-0.0073537827,0.6755049,0.36467794,1.078565,0.10911313,1.078565,"up","MEOX2",4223,"0001525 // angiogenesis // inferred from electronic annotation /// 0001757 // somite specification // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008015 // blood circulation // traceable author statement /// 0060021 // palate development // inferred from electronic annotation /// 0060173 // limb development // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr7:15650838-15726435 (-) // 96.29 // p21.2"]
["11730786_a_at",0.11136961,-0.17731667,-0.06684303,0.051207066,0.14172316,-0.051207066,0.7134009,0.41570643,-1.0654807,-0.09150447,1.0654807,"down","KLHL20",27252,"0007010 // cytoskeleton organization // traceable author statement /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0035455 // response to interferon-alpha // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0015629 // actin cytoskeleton // traceable author statement /// 0016605 // PML body // inferred from direct assay /// 0031463 // Cul3-RING ubiquitin ligase complex // inferred from direct assay /// 0044444 // cytoplasmic part // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0019964 // interferon-gamma binding // inferred from direct assay","chr1:173684051-173755960 (+) // 99.12 // q25.1"]
["11744350_a_at",-0.16808224,-0.25633812,-0.31593323,0.30452633,0.2195406,0.16808224,0.044432618,0.001229704,-1.3923297,-0.47750086,1.3923297,"down","RPS27L",51065,"0006281 // DNA repair // inferred from mutant phenotype /// 0006412 // translation // inferred from direct assay /// 0006412 // translation // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0031571 // mitotic cell cycle G1/S transition DNA damage checkpoint // inferred from mutant phenotype /// 0042771 // DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis // inferred from direct assay /// 0045727 // positive regulation of translation // inferred from direct assay /// 0045768 // positive regulation of anti-apoptosis // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005840 // ribosome // inferred from electronic annotation /// 0022627 // cytosolic small ribosomal subunit // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008494 // translation activator activity // inferred from direct assay /// 0008656 // cysteine-type endopeptidase activator activity involved in apoptotic process // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:63446051-63449678 (-) // 76.62 // q22.2"]
["11758531_x_at",0.0032110214,-0.10500145,-0.078944206,0.058894157,0.018637657,-0.0032110214,0.33581784,0.08506434,-1.0607014,-0.08501854,1.0607014,"down","GALE",2582,"0005975 // carbohydrate metabolic process // traceable author statement /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006012 // galactose metabolic process // inferred from electronic annotation /// 0019388 // galactose catabolic process // inferred from direct assay /// 0019388 // galactose catabolic process // traceable author statement /// 0044237 // cellular metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003978 // UDP-glucose 4-epimerase activity // not recorded /// 0003978 // UDP-glucose 4-epimerase activity // inferred from direct assay /// 0003978 // UDP-glucose 4-epimerase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0016857 // racemase and epimerase activity, acting on carbohydrates and derivatives // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0050662 // coenzyme binding // inferred from electronic annotation","chr1:24122099-24122669 (-) // 95.95 // p36.11"]
["11735614_at",0.012434483,0.06011772,0.08073306,-0.13529778,-0.012434483,-0.08518314,0.21390823,0.034861043,1.0933335,0.12873352,1.0933335,"up","EGR4",1961,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:73518061-73520833 (-) // 99.0 // p13.1"]
["11753635_x_at",-0.0062203407,0.07600975,0.010577202,-0.020443916,0.006219864,-0.010313511,0.573688,0.25379992,1.0245341,0.03496801,1.0245341,"up","MED24",9862,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016573 // histone acetylation // inferred from electronic annotation /// 0030518 // intracellular steroid hormone receptor signaling pathway // inferred from direct assay /// 0030521 // androgen receptor signaling pathway // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0051291 // protein heterooligomerization // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016592 // mediator complex // non-traceable author statement /// 0016592 // mediator complex // inferred from electronic annotation","0001104 // RNA polymerase II transcription cofactor activity // inferred from direct assay /// 0003712 // transcription cofactor activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // non-traceable author statement /// 0042809 // vitamin D receptor binding // non-traceable author statement /// 0046966 // thyroid hormone receptor binding // inferred from direct assay","chr17:38175381-38209868 (-) // 91.84 // q21.1"]
["11753963_x_at",-0.008886337,-0.088002205,-0.11244297,0.044753075,0.024864197,0.008887291,0.2392178,0.04351684,-1.0687655,-0.09594537,1.0687655,"down","LAMP1",3916,"0006914 // autophagy // inferred from electronic annotation /// 0048102 // autophagic cell death // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005764 // lysosome // traceable author statement /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0005770 // late endosome // inferred from electronic annotation /// 0005771 // multivesicular body // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031982 // vesicle // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0042599 // lamellar body // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","","chr13:113951555-113977740 (+) // 94.16 // q34"]
["11747262_s_at",0.035197258,0.0760088,-0.036211967,-0.035197258,0.09573555,-0.16401672,0.77662766,0.5075493,1.0420979,0.059490852,1.0420979,"up","RRAS2",22800,"0006184 // GTP catabolic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // inferred from electronic annotation /// 0009987 // cellular process // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // non-traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation","chr11:14300227-14386052 (-) // 99.53 // p15.2"]
["11757933_s_at",-0.0729208,-0.21778679,-0.20431805,0.29244804,0.15378475,0.0729208,0.13064788,0.012865838,-1.2640554,-0.33805966,1.2640554,"down","BTG2",7832,"0006281 // DNA repair // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006479 // protein methylation // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0008306 // associative learning // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010243 // response to organic nitrogen // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0021542 // dentate gyrus development // inferred from electronic annotation /// 0021954 // central nervous system neuron development // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0045768 // positive regulation of anti-apoptosis // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051602 // response to electrical stimulus // inferred from electronic annotation /// 0060213 // positive regulation of nuclear-transcribed mRNA poly(A) tail shortening // inferred from direct assay /// 2000178 // negative regulation of neural precursor cell proliferation // inferred from electronic annotation","","0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation","chr1:203278301-203278727 (+) // 98.38 // q32.1"]
["11755047_a_at",0.6366358,0.047926903,-0.06425762,0.7056265,-0.070406914,-0.047926903,0.991514,0.9753752,1.0076567,0.011004199,1.0076567,"up","NPLOC4",55666,"0006944 // cellular membrane fusion // inferred from sequence or structural similarity /// 0006944 // cellular membrane fusion // inferred from electronic annotation /// 0007030 // Golgi organization // inferred from sequence or structural similarity /// 0007030 // Golgi organization // inferred from electronic annotation /// 0030433 // ER-associated protein catabolic process // inferred from sequence or structural similarity /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0042175 // nuclear outer membrane-endoplasmic reticulum membrane network // inferred from sequence or structural similarity","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:79523914-79539134 (-) // 91.87 // q25.3"]
["11718613_a_at",-0.11829996,-0.06506491,0.003308773,-0.003308773,0.21380901,0.29353523,0.3148689,0.07520009,-1.171235,-0.22803053,1.171235,"down","ABCD4",5826,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0055085 // transmembrane transport // non-traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation /// 0005778 // peroxisomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043190 // ATP-binding cassette (ABC) transporter complex // non-traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // non-traceable author statement /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation","chr14:74751979-74769767 (-) // 94.11 // q24.3"]
["11736184_a_at",-0.11648893,-0.03359866,-0.0028173923,0.18829322,0.058642864,0.0028176308,0.37541953,0.106214955,-1.097499,-0.13421965,1.097499,"down","FSCB",84075,"0018105 // peptidyl-serine phosphorylation // inferred from electronic annotation","0005929 // cilium // inferred from electronic annotation /// 0019861 // flagellum // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0044442 // microtubule-based flagellum part // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr14:44973355-44976728 (-) // 99.09 // q21.2"]
["11734390_a_at",-0.03441906,0.034419537,0.05494976,-0.07691145,0.12183046,-0.07024956,0.8925493,0.723725,1.0187219,0.02676032,1.0187219,"up","ABLIM2",84448,"0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0030016 // myofibril // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0003779 // actin binding // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:7967036-8160559 (-) // 96.11 // p16.1"]
["11732037_a_at",0.0146923065,-0.0146923065,0.07469654,-0.04675007,0.020489693,-0.10094929,0.5114199,0.19987774,1.0477555,0.06730206,1.0477555,"up","PTPN12",5782,"0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0002102 // podosome // inferred from electronic annotation /// 0005625 // soluble fraction // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004726 // non-membrane spanning protein tyrosine phosphatase activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from physical interaction","chr7:77167351-77269388 (+) // 99.01 // q11.23"]
["11730362_a_at",0.16161585,-0.102268696,-0.010960102,0.0109603405,-0.042105198,0.13950872,0.94343966,0.8424731,-1.013954,-0.019992264,1.013954,"down","KIAA1107",23285,"","","","chr1:92632608-92650284 (+) // 98.67 // p22.1"]
["11716191_at",-0.29690123,-0.31460714,-0.40135622,0.4963522,0.4538126,0.2969017,0.028804839,0.00039304508,-1.6856563,-0.7533104,1.6856563,"down","C15orf44",81556,"","0005737 // cytoplasm // inferred from direct assay","","chr15:65871094-65903486 (-) // 98.53 // q22.31"]
["11742708_a_at",0.0029788017,-0.24130154,-0.35663557,0.46963978,0.047461033,-0.0029792786,0.38883758,0.11426289,-1.2920781,-0.3696933,1.2920781,"down","P4HTM",54681,"0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005506 // iron ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from electronic annotation /// 0031418 // L-ascorbic acid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:49027340-49044548 (+) // 97.5 // p21.31"]
["11740584_x_at",0.10484123,0.017987251,0.0024585724,-0.0024590492,-0.17834568,-0.31799173,0.3594866,0.09780627,1.1551081,0.20802785,1.1551081,"up","PACRGL",133015,"","","","chr4:20702035-20729979 (+) // 83.56 // p15.31"]
["11740925_a_at",-0.032152176,0.15202999,-0.064836025,0.032152176,-0.087724686,0.18317747,0.93706733,0.826591,-1.016907,-0.024187712,1.016907,"down","FAM151B",167555,"","","","chr5:79783799-79838381 (+) // 99.3 // q14.1"]
["11753900_x_at",0.1319313,0.10469055,0.09774685,-0.09774685,-0.11928749,-0.107564926,0.015009494,5.5017623e-5,1.1644559,0.21965599,1.1644559,"up","MT2A",4502,"0006878 // cellular copper ion homeostasis // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0035690 // cellular response to drug // inferred from direct assay /// 0036016 // cellular response to interleukin-3 // inferred from expression pattern /// 0036018 // cellular response to erythropoietin // inferred from expression pattern /// 0045926 // negative regulation of growth // inferred from sequence or structural similarity /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0071294 // cellular response to zinc ion // inferred from expression pattern","0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity","0005515 // protein binding // inferred from physical interaction /// 0008144 // drug binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:56642564-56643409 (+) // 79.71 // q12.2"]
["11753591_x_at",0.27741432,0.008049965,-0.008049965,0.10270023,-0.34546566,-0.12766933,0.5655292,0.24622694,1.1614683,0.21594973,1.1614683,"up","PRR13",54458,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003723 // RNA binding // inferred from electronic annotation","chr12:53837173-53839992 (+) // 90.77 // q13.13 /// chr19:40448992-40449588 (-) // 93.12 // q13.2"]
["11739141_a_at",-0.045078754,-0.041809082,0.070180416,-0.031686306,0.13699198,0.031686306,0.7419523,0.45566168,-1.0361502,-0.051233172,1.0361502,"down","LILRB5",10990,"0006952 // defense response // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement","chr19:54754270-54761472 (-) // 87.64 // q13.42"]
["11749804_a_at",0.17714453,0.0023932457,-0.041182756,-0.002393484,0.043149233,-0.037949085,0.80654883,0.5576302,1.0318139,0.04518273,1.0318139,"up","CELF6",60677,"0000381 // regulation of alternative nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation","chr15:72578245-72598656 (-) // 91.43 // q23"]
["11745984_a_at",0.26293945,-0.09790039,-0.038604736,0.47021294,0.038604736,-0.07650089,0.8503692,0.6377263,-1.0732311,-0.10196076,1.0732311,"down","SRRM1",10250,"0000375 // RNA splicing, via transesterification reactions // traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr1:24970049-24999158 (+) // 92.44 // p36.11"]
["11763697_s_at",0.360147,-0.2620411,-0.093108654,0.50255966,0.07107687,-0.07107687,0.8013276,0.5486254,-1.12183,-0.16585405,1.12183,"down","SNHG9 /// SNORA78","677844 /// 735301","","","","chr16:2014976-2015505 (+) // 63.57 // p13.3"]
["11715160_x_at",-0.06709123,-0.11736131,-0.016246557,0.020747662,0.016246557,0.12367439,0.27564996,0.057618905,-1.0870783,-0.1204559,1.0870783,"down","LOC650293",650293,"0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr4:8951476-8952127 (+) // 100.0 // p16.1 /// chr4:9485511-9486162 (+) // 96.01 // p16.1 /// chr3:129740611-129741262 (-) // 95.39 // q22.1"]
["11763408_x_at",0.13142776,0.021212101,0.18215036,-0.021212101,-0.416255,-0.19258595,0.2818213,0.060243905,1.2497282,0.32161435,1.2497282,"up","ANKRD36BP2",645784,"","","","chr2:89065418-89106133 (+) // 90.38 // p11.2"]
["11740844_s_at",-0.16348267,0.017776012,-0.017776012,0.30781078,0.09602308,-0.16348267,0.7107085,0.41200805,-1.097797,-0.13461135,1.097797,"down","VWDE",221806,"","0005576 // extracellular region // inferred from electronic annotation","","chr7:12370508-12443852 (-) // 100.0 // p21.3"]
["11736577_a_at",0.1131835,0.077260494,0.31902266,-0.07726097,-0.2520914,-0.13203382,0.17810108,0.023927093,1.2514647,0.3236176,1.2514647,"up","IRAK1BP1",134728,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007249 // I-kappaB kinase/NF-kappaB cascade // inferred from sequence or structural similarity /// 0007249 // I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","","chr6:79577188-79608320 (+) // 97.06 // q14.1"]
["11751497_a_at",-0.018632889,0.10590935,-0.07209921,0.018632889,-0.14104843,0.17886543,0.9653012,0.90331316,-1.0095816,-0.013757473,1.0095816,"down","TMEM180",79847,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr10:104221159-104239484 (+) // 96.78 // q24.32"]
["11752223_x_at",-0.03829193,-0.11714697,-0.0397048,0.17656231,0.12188673,0.03829193,0.16583689,0.020822357,-1.1307616,-0.17729482,1.1307616,"down","POLH",5429,"0000731 // DNA synthesis involved in DNA repair // inferred from direct assay /// 0006260 // DNA replication // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006282 // regulation of DNA repair // traceable author statement /// 0006290 // pyrimidine dimer repair // inferred from electronic annotation /// 0006301 // postreplication repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0010225 // response to UV-C // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // traceable author statement /// 0003887 // DNA-directed DNA polymerase activity // inferred from electronic annotation /// 0003887 // DNA-directed DNA polymerase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:43543921-43582460 (+) // 95.21 // p21.1"]
["11730140_at",-0.23393631,-0.022170305,-0.06379509,0.022170067,0.16812229,0.09663391,0.27872697,0.05894487,-1.150512,-0.202276,1.150512,"down","LGALS13",29124,"0006644 // phospholipid metabolic process // traceable author statement /// 0016042 // lipid catabolic process // inferred from electronic annotation","","0004091 // carboxylesterase activity // inferred from electronic annotation /// 0004622 // lysophospholipase activity // inferred from electronic annotation /// 0004622 // lysophospholipase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr19:40093159-40098114 (+) // 92.5 // q13.2"]
["11728581_at",-0.24600697,0.14510107,-0.047593594,-0.35750008,0.047593594,0.09885645,0.9695675,0.9148947,1.0145572,0.020850265,1.0145572,"up","ZNF497",162968,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:58865722-58874120 (-) // 78.05 // q13.43"]
["11727219_a_at",-0.5223255,-0.15769863,-0.21734619,0.15769863,0.37910652,0.43735504,0.124232635,0.011597451,-1.5409751,-0.62384355,1.5409751,"down","DSE",29940,"0006334 // nucleosome assembly // inferred from electronic annotation /// 0015012 // heparan sulfate proteoglycan biosynthetic process // inferred from electronic annotation /// 0030206 // chondroitin sulfate biosynthetic process // inferred from electronic annotation /// 0030208 // dermatan sulfate biosynthetic process // inferred from direct assay","0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016853 // isomerase activity // inferred from electronic annotation /// 0047757 // chondroitin-glucuronate 5-epimerase activity // inferred from direct assay /// 0047757 // chondroitin-glucuronate 5-epimerase activity // inferred from electronic annotation","chr6:116601233-116759879 (+) // 96.85 // q22.1"]
["11753964_x_at",-0.037849426,-0.038793564,0.037849426,0.0470829,0.05523014,-0.06412697,0.8339043,0.60760516,-1.0179452,-0.025659855,1.0179452,"down","HSPH1",10808,"0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // traceable author statement /// 0045345 // positive regulation of MHC class I biosynthetic process // traceable author statement /// 0051085 // chaperone mediated protein folding requiring cofactor // inferred from electronic annotation /// 0051135 // positive regulation of NK T cell activation // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0043014 // alpha-tubulin binding // inferred from electronic annotation","chr13:31710764-31736525 (-) // 99.66 // q12.3"]
["11755549_a_at",0.045056343,-0.24421215,-0.080984116,-0.045056343,0.08474493,0.09412336,0.53599054,0.2200948,-1.1003664,-0.13798393,1.1003664,"down","SEMA6D",80031,"0006501 // C-terminal protein lipidation // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0016254 // preassembly of GPI anchor in ER membrane // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0030215 // semaphorin receptor binding // inferred from electronic annotation","chr15:48058309-48064407 (+) // 99.51 // q21.1"]
["11726007_s_at",-0.1934824,0.080011606,0.022325277,-0.059043646,-0.022325039,0.031191826,0.95905596,0.8832185,-1.0095108,-0.013656281,1.0095108,"down","DPY19L2 /// DPY19L2P1","283417 /// 554236","0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007286 // spermatid development // inferred from mutant phenotype /// 0030154 // cell differentiation // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:63952692-64062417 (-) // 98.71 // q14.2"]
["11755604_x_at",0.05794525,0.015001297,0.0036096573,-0.006049156,-0.0036096573,-0.011799812,0.4024001,0.12239769,1.0229046,0.03267165,1.0229046,"up","RPL7A /// SNORD24 /// SNORD36A /// SNORD36B","26814 /// 26815 /// 26820 /// 6130","0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement","0005624 // membrane fraction // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0042788 // polysomal ribosome // inferred from direct assay","0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr9:136216864-136218280 (+) // 97.01 // q34.2 /// chr14:70351998-70352485 (-) // 88.25 // q24.2 /// chr18:36914780-36915264 (-) // 88.05 // q12.2"]
["11717101_a_at",0.4385271,-0.05541849,-0.13859606,0.6719599,0.055418015,-0.079241276,0.86698586,0.67006886,-1.0977437,-0.13454132,1.0977437,"down","SLC38A1",81539,"0001504 // neurotransmitter uptake // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006865 // amino acid transport // traceable author statement /// 0006865 // amino acid transport // inferred from electronic annotation /// 0006868 // glutamine transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0015804 // neutral amino acid transport // non-traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation","0005283 // sodium:amino acid symporter activity // non-traceable author statement /// 0015175 // neutral amino acid transmembrane transporter activity // non-traceable author statement /// 0015186 // L-glutamine transmembrane transporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation","chr12:46576837-46663220 (-) // 93.32 // q13.11"]
["11746469_x_at",0.28124428,-0.17878056,-0.09501934,0.502203,0.09501934,-0.12096596,0.79348636,0.5359268,-1.1144027,-0.1562706,1.1144027,"down","DARS",1615,"0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006418 // tRNA aminoacylation for protein translation // inferred from electronic annotation /// 0006422 // aspartyl-tRNA aminoacylation // inferred from electronic annotation /// 0006422 // aspartyl-tRNA aminoacylation // traceable author statement /// 0006461 // protein complex assembly // traceable author statement /// 0010467 // gene expression // traceable author statement","0005625 // soluble fraction // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004046 // aminoacylase activity // traceable author statement /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004815 // aspartate-tRNA ligase activity // inferred from electronic annotation /// 0004815 // aspartate-tRNA ligase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation","chr2:136664253-136743117 (-) // 92.94 // q21.3"]
["11730223_a_at",-0.063127995,0.14449787,0.015696526,-0.24219704,-0.015696526,0.25238895,0.94098663,0.8364501,1.0239819,0.034190256,1.0239819,"up","PNPLA2",57104,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010891 // negative regulation of sequestering of triglyceride // inferred from direct assay /// 0010891 // negative regulation of sequestering of triglyceride // inferred from electronic annotation /// 0010898 // positive regulation of triglyceride catabolic process // inferred from direct assay /// 0010898 // positive regulation of triglyceride catabolic process // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0019433 // triglyceride catabolic process // inferred from electronic annotation","0005811 // lipid particle // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004806 // triglyceride lipase activity // inferred from sequence or structural similarity /// 0004806 // triglyceride lipase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0050253 // retinyl-palmitate esterase activity // inferred from electronic annotation","chr11:818900-825573 (+) // 97.51 // p15.5"]
["11747504_a_at",-0.15166283,0.20090008,-0.24679852,0.051558018,-0.051558018,0.14615583,0.75889707,0.48111546,-1.0826541,-0.114572406,1.0826541,"down","ZNF510",22869,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:99520365-99540398 (-) // 91.69 // q22.33"]
["11754660_a_at",-0.02733612,0.11809945,-0.07555723,0.07882762,-0.049875736,0.027336359,0.9474022,0.8527483,-1.0095372,-0.013694101,1.0095372,"down","GOLT1A",127845,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:204167290-204183110 (-) // 93.22 // q32.1"]
["11736487_at",0.10634327,0.2665882,0.28831005,-0.12319088,-0.12435675,-0.10634327,0.07736796,0.0042139837,1.2643338,0.33837745,1.2643338,"up","RASGEF1B",153020,"0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005088 // Ras guanyl-nucleotide exchange factor activity // inferred from direct assay","chr4:82348176-82393069 (-) // 98.93 // q21.21"]
["11741817_a_at",-0.01906681,-0.20913172,0.08467913,-0.10845184,0.20208168,0.01906681,0.79056525,0.5306913,-1.0609858,-0.08540535,1.0609858,"down","SLC12A5",57468,"0006810 // transport // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from electronic annotation /// 0006873 // cellular ion homeostasis // non-traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007612 // learning // inferred from electronic annotation /// 0015696 // ammonium transport // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0040040 // thermosensory behavior // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0051452 // intracellular pH reduction // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0032590 // dendrite membrane // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation","0015293 // symporter activity // inferred from electronic annotation /// 0015377 // cation:chloride symporter activity // inferred from electronic annotation /// 0015379 // potassium:chloride symporter activity // inferred from electronic annotation /// 0015379 // potassium:chloride symporter activity // non-traceable author statement /// 0051739 // ammonia transmembrane transporter activity // inferred from electronic annotation","chr20:44650328-44688789 (+) // 98.22 // q13.12"]
["11731253_a_at",0.2317791,0.013651848,-0.051942825,0.15337658,-0.013651848,-0.07976818,0.88533735,0.70720255,1.0313332,0.04451052,1.0313332,"up","C16orf13",84326,"","","","chr16:684429-686366 (-) // 85.2 // p13.3"]
["11758045_s_at",0.03884411,-0.03884411,0.105220795,-0.04370594,0.19727612,-0.14651012,0.91727215,0.781036,1.0229391,0.032720238,1.0229391,"up","KIAA1804",84451,"0000165 // MAPK cascade // inferred from electronic annotation /// 0000186 // activation of MAPKK activity // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from sequence or structural similarity","","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004709 // MAP kinase kinase kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity","chr1:233520499-233521070 (+) // 98.95 // q42.2"]
["11743422_a_at",0.13408995,-0.031929016,0.03192854,0.06744146,-0.2794876,-0.3963065,0.47011307,0.16848479,1.1871322,0.24748065,1.1871322,"up","BAG4",9530,"0006457 // protein folding // traceable author statement /// 0006916 // anti-apoptosis // traceable author statement /// 0010763 // positive regulation of fibroblast migration // inferred from electronic annotation /// 0030838 // positive regulation of actin filament polymerization // inferred from electronic annotation /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from electronic annotation /// 0045785 // positive regulation of cell adhesion // inferred from electronic annotation /// 0051496 // positive regulation of stress fiber assembly // inferred from electronic annotation /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0071356 // cellular response to tumor necrosis factor // inferred from direct assay /// 0071364 // cellular response to epidermal growth factor stimulus // inferred from electronic annotation /// 0072659 // protein localization in plasma membrane // inferred from electronic annotation /// 0097178 // ruffle assembly // inferred from electronic annotation /// 2001145 // negative regulation of phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay","0005057 // receptor signaling protein activity // traceable author statement /// 0051087 // chaperone binding // inferred from electronic annotation","chr8:38034105-38070819 (+) // 83.7 // p11.23"]
["11734486_a_at",-0.005510807,-0.06682062,-0.39040375,0.005510807,0.30463362,0.22872066,0.34354427,0.08911558,-1.260387,-0.33386672,1.260387,"down","WFDC8",90199,"0010466 // negative regulation of peptidase activity // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr20:44180400-44207965 (-) // 81.89 // q13.12"]
["11726849_at",-0.09805751,0.0723362,0.21596098,0.040771723,-0.040771723,-0.08342409,0.70510167,0.40375462,1.0652716,0.091221325,1.0652716,"up","SHC4",399694,"0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0019904 // protein domain specific binding // inferred from electronic annotation /// 0030971 // receptor tyrosine kinase binding // inferred from electronic annotation","chr15:49115931-49255662 (-) // 95.64 // q21.1"]
["11722718_a_at",0.028009415,0.061413288,-0.028200626,-0.12166929,-0.028009415,0.028083801,0.6172311,0.29738805,1.0431445,0.06093897,1.0431445,"up","BAIAP2",10458,"0007165 // signal transduction // inferred from electronic annotation /// 0007409 // axonogenesis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0009617 // response to bacterium // inferred from mutant phenotype /// 0016358 // dendrite development // inferred from electronic annotation /// 0032956 // regulation of actin cytoskeleton organization // inferred from mutant phenotype /// 0046847 // filopodium assembly // inferred from electronic annotation /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0051017 // actin filament bundle assembly // inferred from electronic annotation","0001726 // ruffle // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0030175 // filopodium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // traceable author statement /// 0008093 // cytoskeletal adaptor activity // inferred from electronic annotation /// 0008093 // cytoskeletal adaptor activity // traceable author statement /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0070064 // proline-rich region binding // inferred from direct assay","chr17:79008946-79084378 (+) // 98.74 // q25.3"]
["11751529_a_at",-0.025244713,-0.060168266,-0.032390594,0.03394127,0.025244713,0.17252254,0.3158092,0.07571876,-1.0841047,-0.116504036,1.0841047,"down","TF",7018,"0002576 // platelet degranulation // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006826 // iron ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0006879 // cellular iron ion homeostasis // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0033572 // transferrin transport // traceable author statement /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005769 // early endosome // inferred from direct assay /// 0005770 // late endosome // inferred from direct assay /// 0005905 // coated pit // inferred from direct assay /// 0009925 // basal plasma membrane // inferred from direct assay /// 0010008 // endosome membrane // traceable author statement /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from direct assay /// 0030139 // endocytic vesicle // inferred from direct assay /// 0030141 // secretory granule // traceable author statement /// 0045178 // basal part of cell // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0055037 // recycling endosome // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008199 // ferric iron binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:133465076-133474655 (+) // 98.02 // q22.1"]
["11748428_a_at",0.031217575,-0.042341232,-0.032589912,0.0006637573,-0.0006632805,0.015620232,0.73838276,0.45004806,-1.0138035,-0.019778024,1.0138035,"down","PGS1",9489,"0006655 // phosphatidylglycerol biosynthetic process // inferred from sequence or structural similarity /// 0006655 // phosphatidylglycerol biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0032049 // cardiolipin biosynthetic process // inferred from sequence or structural similarity /// 0046339 // diacylglycerol metabolic process // inferred from sequence or structural similarity","0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0008444 // CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity // inferred from sequence or structural similarity /// 0008444 // CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016780 // phosphotransferase activity, for other substituted phosphate groups // inferred from electronic annotation","chr17:76374742-76420638 (+) // 95.23 // q25.3"]
["11730053_a_at",0.03175211,-0.03175211,0.26299357,0.03776121,-0.08092713,-0.25475454,0.5170934,0.20440866,1.1383715,0.18697141,1.1383715,"up","SNX16",64089,"0006622 // protein targeting to lysosome // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0008333 // endosome to lysosome transport // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0045022 // early endosome to late endosome transport // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005770 // late endosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031313 // extrinsic to endosome membrane // inferred from direct assay /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","0008289 // lipid binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from direct assay /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction","chr8:82711819-82754534 (-) // 97.34 // q21.13"]
["11728943_at",-0.018694162,0.32116485,0.06917691,-0.16193867,0.018694162,-0.028984547,0.500045,0.19097781,1.1338991,0.18129225,1.1338991,"up","ZNF404",342908,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:44376514-44384355 (-) // 94.06 // q13.31"]
["11736931_s_at",-0.0075883865,0.091674805,0.083013535,-0.08474064,-0.015104294,0.0075883865,0.3810736,0.109743975,1.0617559,0.08645212,1.0617559,"up","FAM72A /// FAM72B /// FAM72D","653820 /// 728833 /// 729533","","","","chr1:206138454-206155147 (+) // 96.15 // q32.1 /// chr1:120838982-120855680 (+) // 95.74 // p11.2 /// chr1:143896451-143913145 (-) // 95.7 // q21.1"]
["11727185_at",0.06447315,-0.13329983,0.21776533,-0.24847984,0.012727261,-0.012727261,0.6797167,0.37008405,1.096171,0.1324729,1.096171,"up","CCDC164",92749,"","","","chr2:26624779-26679579 (+) // 92.46 // p23.3"]
["11742191_a_at",-0.14632034,0.06430149,0.028326988,-0.23188686,-0.028326988,0.12303829,0.9384796,0.83031094,1.019476,0.027827892,1.019476,"up","LOC100506403 /// RUNX1","100506403 /// 861","0001501 // skeletal system development // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0002318 // myeloid progenitor cell differentiation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0009966 // regulation of signal transduction // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from direct assay /// 0030097 // hemopoiesis // traceable author statement /// 0030099 // myeloid cell differentiation // inferred from direct assay /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0030853 // negative regulation of granulocyte differentiation // inferred from mutant phenotype /// 0030854 // positive regulation of granulocyte differentiation // inferred from mutant phenotype /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0035162 // embryonic hemopoiesis // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048266 // behavioral response to pain // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation /// 0048935 // peripheral nervous system neuron development // traceable author statement /// 0060216 // definitive hemopoiesis // inferred from electronic annotation /// 0071336 // regulation of hair follicle cell proliferation // inferred from electronic annotation /// 0071425 // hemopoietic stem cell proliferation // traceable author statement","0005604 // basement membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000975 // regulatory region DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0070491 // repressing transcription factor binding // inferred from electronic annotation","chr21:36160097-36421595 (-) // 94.77 // q22.12"]
["11718505_s_at",-0.013555527,-0.0635767,-0.07271767,0.3657093,0.23723984,0.013555527,0.3052494,0.07089744,-1.1937093,-0.2554515,1.1937093,"down","SRSF10",10772,"0000244 // assembly of spliceosomal tri-snRNP // non-traceable author statement /// 0000375 // RNA splicing, via transesterification reactions // inferred from direct assay /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006376 // mRNA splice site selection // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // non-traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0016482 // cytoplasmic transport // inferred from direct assay /// 0048025 // negative regulation of nuclear mRNA splicing, via spliceosome // inferred from direct assay","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0050733 // RS domain binding // non-traceable author statement /// 0051082 // unfolded protein binding // non-traceable author statement","chr1:24290836-24306885 (-) // 85.86 // p36.11 /// chr1_gl000191_random:34172-50213 (-) // 85.84 //"]
["11745642_at",-0.018883705,-0.051749945,0.024695635,-0.124060154,0.018883705,0.14312696,0.9030455,0.745239,-1.0195714,-0.027962843,1.0195714,"down",-0.124060154,0.018883705,0.14312696,-0.018883705,-0.051749945,0.024695635]
["11723900_a_at",0.077815056,0.08766222,0.27321672,-0.1123023,-0.077815056,-0.22098017,0.16685377,0.02106151,1.2169449,0.2832639,1.2169449,"up","KIAA2018",205717,"","0005634 // nucleus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0004571 // mannosyl-oligosaccharide 1,2-alpha-mannosidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation","chr3:113367231-113415493 (-) // 92.86 // q13.2"]
["11740912_a_at",0.14593506,0.09404993,-0.02618742,-0.08356142,0.011481285,-0.011481285,0.46608916,0.16526137,1.0711197,0.09911966,1.0711197,"up","BANK1",55024,"0042113 // B cell activation // inferred from electronic annotation","","","chr4:102711763-102995967 (+) // 96.99 // q24"]
["11750271_a_at",-0.0020370483,0.0020370483,-0.04418373,0.067269325,-0.12246227,0.0346632,0.96502614,0.90244937,-1.0054802,-0.007884629,1.0054802,"down","PANX2",56666,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0007267 // cell-cell signaling // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0034214 // protein hexamerization // inferred from sequence or structural similarity","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005921 // gap junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005243 // gap junction channel activity // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0055077 // gap junction hemi-channel activity // inferred from sequence or structural similarity","chr22:50609189-50618032 (+) // 99.6 // q13.33"]
["11755858_a_at",0.05475974,0.034899235,0.22121215,-0.052047968,-0.034899235,-0.07848716,0.27736166,0.05831878,1.1163338,0.15876853,1.1163338,"up","MS4A1",931,"0006955 // immune response // traceable author statement /// 0042113 // B cell activation // inferred from electronic annotation","0005730 // nucleolus // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005154 // epidermal growth factor receptor binding // inferred from electronic annotation","chr11:60223319-60237529 (+) // 88.88 // q12.2"]
["11720548_at",0.20525551,0.154953,0.16786289,-0.154953,-0.25008583,-0.17397451,0.02773738,0.00035321008,1.2914827,0.3690283,1.2914827,"up","HNRNPUL2",221092,"","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation","chr11:62481387-62494933 (-) // 93.64 // q12.3"]
["11742751_a_at",0.037010193,-0.08473587,-0.015698433,0,0.117111206,0,0.63447237,0.316382,-1.0425947,-0.06017839,1.0425947,"down","ITIH3",3699,"0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // traceable author statement /// 0030212 // hyaluronan metabolic process // inferred from electronic annotation","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation","0004866 // endopeptidase inhibitor activity // traceable author statement /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr3:52828809-52843025 (+) // 98.85 // p21.1"]
["11745143_a_at",0.15777254,-0.05460739,0.09329414,-0.16335583,-0.10432768,0.054606915,0.51863015,0.20589812,1.0992442,0.13651197,1.0992442,"up","SYNE2",23224,"0006998 // nuclear envelope organization // inferred from electronic annotation /// 0007097 // nuclear migration // inferred from mutant phenotype /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0010761 // fibroblast migration // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from sequence or structural similarity /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031022 // nuclear migration along microfilament // inferred from sequence or structural similarity /// 0031022 // nuclear migration along microfilament // inferred from electronic annotation /// 0034504 // protein localization to nucleus // inferred from electronic annotation /// 0051642 // centrosome localization // inferred from mutant phenotype /// 0051642 // centrosome localization // inferred from electronic annotation /// 0090286 // cytoskeletal anchoring at nuclear membrane // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005640 // nuclear outer membrane // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016529 // sarcoplasmic reticulum // inferred from direct assay /// 0016529 // sarcoplasmic reticulum // inferred from electronic annotation /// 0030016 // myofibril // inferred from electronic annotation /// 0030018 // Z disc // inferred from direct assay /// 0030018 // Z disc // inferred from electronic annotation /// 0031258 // lamellipodium membrane // inferred from direct assay /// 0031527 // filopodium membrane // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay /// 0031981 // nuclear lumen // inferred from direct assay /// 0033017 // sarcoplasmic reticulum membrane // inferred from electronic annotation /// 0034993 // SUN-KASH complex // inferred from direct assay /// 0044429 // mitochondrial part // inferred from direct assay","0003779 // actin binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction","chr14:64319709-64427595 (+) // 82.41 // q23.2"]
["11743159_x_at",-0.014265299,0.0066337585,-0.1146512,-0.0066337585,0.12926936,0.114322186,0.37028348,0.10369479,-1.0865442,-0.119746804,1.0865442,"down","FGG",2266,"0002576 // platelet degranulation // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0007596 // blood coagulation // inferred from electronic annotation /// 0007599 // hemostasis // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030168 // platelet activation // inferred from electronic annotation /// 0051258 // protein polymerization // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from direct assay","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005577 // fibrinogen complex // inferred from electronic annotation /// 0005577 // fibrinogen complex // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005938 // cell cortex // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0031091 // platelet alpha granule // inferred from direct assay /// 0031093 // platelet alpha granule lumen // traceable author statement","0005102 // receptor binding // inferred from electronic annotation /// 0030674 // protein binding, bridging // inferred from electronic annotation /// 0043499 // eukaryotic cell surface binding // inferred from direct assay","chr4:155525732-155533902 (-) // 99.55 // q31.3"]
["11757377_a_at",0.072417736,-0.31860018,-0.258945,0.27202177,0.2678213,-0.072417736,0.40532097,0.123836145,-1.2519563,-0.32418424,1.2519563,"down","DNAH14",127602,"0007018 // microtubule-based movement // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0030286 // dynein complex // inferred from electronic annotation /// 0035085 // cilium axoneme // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr1:225576157-225587057 (+) // 93.16 // q42.12"]
["11758516_s_at",-0.0342021,-0.39343834,-0.09943485,0.5022917,0.111063,0.034201622,0.36011782,0.09814876,-1.3117964,-0.39154384,1.3117964,"down","PTCD3",55037,"","0005739 // mitochondrion // inferred from electronic annotation","","chr2:86366899-86367349 (+) // 91.56 // p11.2"]
["11718336_x_at",0.008738518,-0.34729052,-0.008738518,-0.1581502,0.24246931,0.43182564,0.55939573,0.24048844,-1.2207872,-0.2878117,1.2207872,"down","LMOD1",25802,"0006936 // muscle contraction // traceable author statement","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005523 // tropomyosin binding // inferred from electronic annotation","chr1:201865583-201915792 (-) // 90.85 // q32.1"]
["11733406_a_at",-0.15704536,-0.0018539429,0.0018544197,-0.09867859,0.06288624,0.15398645,0.67863137,0.36826897,-1.0656594,-0.09174641,1.0656594,"down","CLDN19",149461,"0007601 // visual perception // inferred from electronic annotation /// 0016338 // calcium-independent cell-cell adhesion // inferred from sequence or structural similarity /// 0019227 // neuronal action potential propagation // inferred from electronic annotation /// 0043297 // apical junction assembly // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from direct assay /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0043296 // apical junction complex // inferred from direct assay","0005198 // structural molecule activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from sequence or structural similarity","chr1:43198760-43205925 (-) // 85.88 // p34.2"]
["11756280_a_at",-0.08915615,-0.0037975311,-0.03964901,0.019255638,0.069664,0.0037975311,0.31872624,0.07716914,-1.0534389,-0.07510664,1.0534389,"down","NUDT5",11164,"0006139 // nucleobase-containing compound metabolic process // inferred from electronic annotation /// 0009117 // nucleotide metabolic process // non-traceable author statement /// 0009191 // ribonucleoside diphosphate catabolic process // inferred from direct assay /// 0009191 // ribonucleoside diphosphate catabolic process // traceable author statement /// 0019303 // D-ribose catabolic process // non-traceable author statement","0005622 // intracellular // non-traceable author statement","0000287 // magnesium ion binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017110 // nucleoside-diphosphatase activity // inferred from electronic annotation /// 0019144 // ADP-sugar diphosphatase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047631 // ADP-ribose diphosphatase activity // inferred from electronic annotation","chr10:12209628-12238128 (-) // 99.47 // p13"]
["11739892_a_at",0.3114152,0.063993454,-0.106347084,0.30918026,-0.06399298,-0.17956114,0.90063274,0.7404138,1.0481257,0.06781181,1.0481257,"up","ARPC4-TTLL3 /// TTLL3","100526693 /// 26140","0006464 // cellular protein modification process // inferred from electronic annotation /// 0018094 // protein polyglycylation // inferred from direct assay /// 0030041 // actin filament polymerization // inferred from electronic annotation /// 0035082 // axoneme assembly // inferred from sequence or structural similarity /// 0042384 // cilium assembly // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005929 // cilium // inferred from sequence or structural similarity /// 0005929 // cilium // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from sequence or structural similarity /// 0035085 // cilium axoneme // inferred from sequence or structural similarity /// 0035085 // cilium axoneme // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0004835 // tubulin-tyrosine ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0070735 // protein-glycine ligase activity // inferred from direct assay /// 0070736 // protein-glycine ligase activity, initiating // inferred from sequence or structural similarity","chr3:9851671-9878042 (+) // 84.87 // p25.3"]
["11750735_a_at",-0.040157795,0.08385563,0.0126776695,0.16069937,-0.048205376,-0.0126776695,0.9480859,0.85413146,-1.0100875,-0.014480259,1.0100875,"down","COMP",1311,"0001501 // skeletal system development // traceable author statement /// 0003417 // growth plate cartilage development // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0009887 // organ morphogenesis // traceable author statement /// 0060173 // limb development // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay","0005201 // extracellular matrix structural constituent // traceable author statement /// 0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from direct assay /// 0008201 // heparin binding // inferred from direct assay /// 0008201 // heparin binding // inferred from electronic annotation /// 0043395 // heparan sulfate proteoglycan binding // inferred from direct assay","chr19:18893583-18902114 (-) // 99.83 // p13.11"]
["11740044_x_at",0.099368095,-0.02189827,0.02189827,0.06361389,-0.07818222,-0.05173874,0.6875186,0.3809788,1.0390211,0.055225,1.0390211,"up","MTFMT",123263,"0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0071951 // conversion of methionyl-tRNA to N-formyl-methionyl-tRNA // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004479 // methionyl-tRNA formyltransferase activity // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016742 // hydroxymethyl-, formyl- and related transferase activity // inferred from electronic annotation","chr15:65293850-65321976 (-) // 65.72 // q22.31"]
["11732704_a_at",0.3530283,-0.0397954,0.0397954,0.56265974,-0.04929304,-0.054514885,0.9610426,0.88905436,-1.0247518,-0.0352745,1.0247518,"down","FGFRL1",53834,"0001501 // skeletal system development // inferred from electronic annotation /// 0001558 // regulation of cell growth // non-traceable author statement /// 0003179 // heart valve morphogenesis // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0060412 // ventricular septum morphogenesis // inferred from electronic annotation /// 0060539 // diaphragm development // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from direct assay /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from electronic annotation /// 0008201 // heparin binding // inferred from direct assay /// 0017134 // fibroblast growth factor binding // inferred from electronic annotation","chr4:1004939-1020686 (+) // 78.35 // p16.3"]
["11729412_x_at",0.18681335,-0.07894039,-0.16231441,0.350379,0.00552845,-0.00552845,0.73044145,0.43924087,-1.0980473,-0.13494015,1.0980473,"down","C9orf142",286257,"","","","chr9:139886894-139888439 (+) // 85.3 // q34.3"]
["11751166_a_at",-0.01843357,-0.17436981,0.16698217,-0.033943176,0.07039595,0.01843357,0.92854017,0.80712974,-1.0188223,-0.02690246,1.0188223,"down","TRIM5",85363,"0009615 // response to virus // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0070206 // protein trimerization // inferred from direct assay","0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:5686479-5701462 (-) // 80.7 // p15.4"]
["11730283_at",-0.09373808,-0.23587132,-0.14355326,0.11240387,0.18746042,0.09373808,0.080269374,0.0046312567,-1.2217268,-0.28892168,1.2217268,"down","SMU1",55234,"","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","","chr9:33041761-33076718 (-) // 77.43 // p21.1"]
["11742022_s_at",0.47773886,-0.2568605,-0.22750378,0.18636513,-0.16667318,0.16667318,0.93444216,0.8208222,-1.0455993,-0.06433014,1.0455993,"down","IKZF1",10320,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001779 // natural killer cell differentiation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007498 // mesoderm development // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0030183 // B cell differentiation // inferred from electronic annotation /// 0030217 // T cell differentiation // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0040018 // positive regulation of multicellular organism growth // inferred from electronic annotation /// 0045660 // positive regulation of neutrophil differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048535 // lymph node development // inferred from electronic annotation /// 0048538 // thymus development // inferred from electronic annotation /// 0048541 // Peyer's patch development // inferred from electronic annotation /// 0048732 // gland development // inferred from electronic annotation /// 0051138 // positive regulation of NK T cell differentiation // inferred from electronic annotation /// 0060041 // retina development in camera-type eye // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005721 // centromeric heterochromatin // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr7:50344377-50472799 (+) // 96.31 // p12.2"]
["11732579_s_at",-0.1696477,-0.18348265,0.3131616,-0.115338326,0.17630744,0.11533809,0.8897221,0.7178912,-1.05124,-0.072092034,1.05124,"down","ZNF880",400713,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:52873179-52889048 (+) // 98.09 // q13.41"]
["11715166_at",0.11531925,-0.11529112,0.04943514,-0.049434662,0.1089077,-0.20608473,0.8290692,0.5967888,1.0463448,0.06535828,1.0463448,"up","DNAJC12",56521,"0006457 // protein folding // inferred from electronic annotation","","0031072 // heat shock protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr10:69570967-69597937 (-) // 99.11 // q21.3"]
["11743546_a_at",-0.12080097,0.0011911392,0.03372383,0.03330803,-0.0011911392,-0.01268959,0.780363,0.5135131,-1.024631,-0.03510448,1.024631,"down","MYO1B",4430,"0030048 // actin filament-based movement // inferred from sequence or structural similarity /// 0051017 // actin filament bundle assembly // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005903 // brush border // inferred from sequence or structural similarity /// 0005903 // brush border // inferred from electronic annotation /// 0016459 // myosin complex // inferred from electronic annotation /// 0030175 // filopodium // inferred from sequence or structural similarity /// 0071944 // cell periphery // inferred from sequence or structural similarity","0000146 // microfilament motor activity // inferred from sequence or structural similarity /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from sequence or structural similarity /// 0005547 // phosphatidylinositol-3,4,5-trisphosphate binding // inferred from sequence or structural similarity","chr2:192110125-192290102 (+) // 96.44 // q32.3"]
["11734935_a_at",-0.039657593,-0.0009241104,0.0009241104,0.0040979385,-0.01782751,0.0044312477,0.79608214,0.54050696,-1.0070392,-0.010119827,1.0070392,"down","ARID5A",10865,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement","chr2:97202463-97218370 (+) // 96.4 // q11.2"]
["11753333_x_at",0.1315651,0.10353851,0.0076475143,-0.0076475143,-0.1747179,-0.12566662,0.23497717,0.041850027,1.1357099,0.18359435,1.1357099,"up","RTN3",10313,"0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0071786 // endoplasmic reticulum tubular network organization // inferred from mutant phenotype","0000139 // Golgi membrane // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:63448971-63526015 (+) // 100.0 // q13.1 /// chr4:146296557-146297750 (+) // 96.88 // q31.21"]
["11750568_a_at",-0.00861907,0.10674143,0.060680866,0.0086193085,-0.042180777,-0.05885935,0.36282635,0.09943947,1.0597627,0.08374128,1.0597627,"up","SALL1",6299,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001657 // ureteric bud development // inferred from sequence or structural similarity /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0001658 // branching involved in ureteric bud morphogenesis // inferred from sequence or structural similarity /// 0001822 // kidney development // inferred from mutant phenotype /// 0001843 // neural tube closure // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from sequence or structural similarity /// 0003281 // ventricular septum development // inferred from electronic annotation /// 0003337 // mesenchymal to epithelial transition involved in metanephros morphogenesis // inferred from expression pattern /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007507 // heart development // inferred from mutant phenotype /// 0008406 // gonad development // inferred from expression pattern /// 0016575 // histone deacetylation // inferred from sequence or structural similarity /// 0021553 // olfactory nerve development // inferred from sequence or structural similarity /// 0021553 // olfactory nerve development // inferred from electronic annotation /// 0021772 // olfactory bulb development // inferred from electronic annotation /// 0021889 // olfactory bulb interneuron differentiation // inferred from sequence or structural similarity /// 0021915 // neural tube development // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from expression pattern /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from direct assay /// 0030325 // adrenal gland development // inferred from expression pattern /// 0031129 // inductive cell-cell signaling // inferred from sequence or structural similarity /// 0031129 // inductive cell-cell signaling // inferred from electronic annotation /// 0035136 // forelimb morphogenesis // inferred from electronic annotation /// 0035137 // hindlimb morphogenesis // inferred from electronic annotation /// 0042473 // outer ear morphogenesis // inferred from mutant phenotype /// 0042733 // embryonic digit morphogenesis // inferred from mutant phenotype /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045879 // negative regulation of smoothened signaling pathway // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048566 // embryonic digestive tract development // inferred from mutant phenotype /// 0060173 // limb development // inferred from mutant phenotype /// 0061034 // olfactory bulb mitral cell layer development // inferred from mutant phenotype /// 0072073 // kidney epithelium development // inferred from sequence or structural similarity /// 0072092 // ureteric bud invasion // inferred from sequence or structural similarity /// 0072092 // ureteric bud invasion // inferred from electronic annotation /// 2000177 // regulation of neural precursor cell proliferation // inferred from electronic annotation","0000792 // heterochromatin // inferred from direct assay /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0010369 // chromocenter // inferred from direct assay /// 0016581 // NuRD complex // inferred from sequence or structural similarity /// 0016581 // NuRD complex // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0004407 // histone deacetylase activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:51170584-51185181 (-) // 98.92 // q12.1"]
["11735343_at",0.077423096,-0.102707386,-0.23038769,-0.077423334,0.09730482,0.08293009,0.6378284,0.32023177,-1.0863541,-0.119494475,1.0863541,"down","SOX3",6658,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007417 // central nervous system development // traceable author statement /// 0007423 // sensory organ development // inferred from sequence or structural similarity /// 0007423 // sensory organ development // inferred from electronic annotation /// 0007530 // sex determination // inferred from mutant phenotype /// 0007530 // sex determination // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0021854 // hypothalamus development // inferred from sequence or structural similarity /// 0021854 // hypothalamus development // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from sequence or structural similarity /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from sequence or structural similarity /// 0048515 // spermatid differentiation // inferred from electronic annotation /// 0060009 // Sertoli cell development // inferred from electronic annotation /// 0060324 // face development // inferred from sequence or structural similarity /// 0060324 // face development // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from sequence or structural similarity /// 0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from electronic annotation /// 0001106 // RNA polymerase II transcription corepressor activity // inferred from sequence or structural similarity /// 0001106 // RNA polymerase II transcription corepressor activity // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chrX:139585151-139587281 (-) // 87.4 // q27.1"]
["11727453_a_at",-0.023098946,0.059955597,0.023098946,0.03048706,-0.13413334,-0.14262295,0.4734813,0.17094022,1.0733161,0.10207502,1.0733161,"up","C17orf79",55352,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0043985 // histone H4-R3 methylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0042393 // histone binding // inferred from direct assay","chr17:30178883-30186356 (-) // 89.87 // q11.2"]
["11750768_a_at",0.2143383,-0.09644222,0.019204617,0.08649826,-0.081131935,-0.019204617,0.85736394,0.65093356,1.0354896,0.050313007,1.0354896,"up","OSBPL6",114880,"0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation","","0005543 // phospholipid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation","chr2:179059226-179247502 (+) // 98.97 // q31.2"]
["11730575_at",-0.09831643,-0.041254044,-0.3111415,0.041254044,0.2166233,0.115737915,0.24739525,0.04661684,-1.209806,-0.27477568,1.209806,"down","ZNF470",388566,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:57078879-57094261 (+) // 67.41 // q13.43"]
["11716820_x_at",0.04970169,0.014446259,-0.027124405,0.012678623,-0.033343315,-0.012678623,0.7138373,0.4161197,1.016391,0.02345556,1.016391,"up","PRSS1",5644,"0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // inferred from direct assay /// 0007586 // digestion // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030307 // positive regulation of cell growth // traceable author statement /// 0030574 // collagen catabolic process // inferred from direct assay /// 0030574 // collagen catabolic process // inferred from mutant phenotype /// 0045087 // innate immune response // traceable author statement /// 0045785 // positive regulation of cell adhesion // traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005576 // extracellular region // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // inferred from mutant phenotype /// 0031012 // extracellular matrix // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // traceable author statement /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from direct assay /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:142457317-142460922 (+) // 96.33 // q34"]
["11720929_a_at",0.5495033,0.13977528,0.20419025,-0.13977528,-0.24897861,-0.16914749,0.1669812,0.021130782,1.3984126,0.48379007,1.3984126,"up","DLST",1743,"0006091 // generation of precursor metabolites and energy // traceable author statement /// 0006099 // tricarboxylic acid cycle // traceable author statement /// 0006099 // tricarboxylic acid cycle // inferred from electronic annotation /// 0006103 // 2-oxoglutarate metabolic process // inferred from electronic annotation /// 0006554 // lysine catabolic process // traceable author statement /// 0006734 // NADH metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0033512 // L-lysine catabolic process to acetyl-CoA via saccharopine // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005792 // microsome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045252 // oxoglutarate dehydrogenase complex // inferred from electronic annotation","0004149 // dihydrolipoyllysine-residue succinyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0031072 // heat shock protein binding // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from electronic annotation","chr14:75348595-75370443 (+) // 98.64 // q24.3"]
["11762503_at",-0.16460323,-0.30927467,0.030763865,-0.027192116,0.027192354,0.13119149,0.4502399,0.1536796,-1.1418991,-0.19143519,1.1418991,"down","GPR126",57211,"0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement","chr6:142726824-142764664 (+) // 65.95 // q24.1"]
["11728191_x_at",-0.14374542,-0.22732067,-0.26251316,0.1999979,0.24015045,0.14374542,0.037763942,0.00083504117,-1.3248457,-0.4058243,1.3248457,"down","CXCR4",7852,"0000187 // activation of MAPK activity // traceable author statement /// 0001569 // patterning of blood vessels // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from expression pattern /// 0001667 // ameboidal cell migration // inferred from electronic annotation /// 0001764 // neuron migration // inferred from electronic annotation /// 0002407 // dendritic cell chemotaxis // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // traceable author statement /// 0007281 // germ cell development // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from electronic annotation /// 0008354 // germ cell migration // inferred from electronic annotation /// 0009615 // response to virus // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0019059 // initiation of viral infection // traceable author statement /// 0019722 // calcium-mediated signaling // inferred from mutant phenotype /// 0030260 // entry into host cell // traceable author statement /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0042098 // T cell proliferation // inferred from electronic annotation /// 0043217 // myelin maintenance // inferred from sequence or structural similarity /// 0043217 // myelin maintenance // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0048699 // generation of neurons // inferred from electronic annotation /// 0048714 // positive regulation of oligodendrocyte differentiation // inferred from sequence or structural similarity /// 0048714 // positive regulation of oligodendrocyte differentiation // inferred from electronic annotation /// 0050920 // regulation of chemotaxis // inferred from mutant phenotype /// 0061351 // neural precursor cell proliferation // inferred from electronic annotation /// 0070098 // chemokine-mediated signaling pathway // inferred from electronic annotation","0005737 // cytoplasm // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0030426 // growth cone // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from direct assay","0003779 // actin binding // inferred from direct assay /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004950 // chemokine receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015026 // coreceptor activity // traceable author statement /// 0016494 // C-X-C chemokine receptor activity // non-traceable author statement /// 0016494 // C-X-C chemokine receptor activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0032027 // myosin light chain binding // inferred from direct assay /// 0043130 // ubiquitin binding // inferred from direct assay","chr2:136871919-136874273 (-) // 97.21 // q22.1"]
["11718698_at",-0.017839909,0.07688713,-0.055101395,0.027990341,-0.02211237,0.017840385,0.95908535,0.8833421,-1.0045788,-0.006590776,1.0045788,"down","C6orf89",221477,"0042060 // wound healing // inferred from direct assay /// 0045787 // positive regulation of cell cycle // inferred from direct assay /// 0050673 // epithelial cell proliferation // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:36853685-36896740 (+) // 91.22 // p21.2"]
["11726188_at",-0.29912543,-0.043872356,-0.18897486,0.1668644,0.119805336,0.043872356,0.1814879,0.024893304,-1.2205276,-0.28750497,1.2205276,"down","SHISA3",152573,"0007275 // multicellular organismal development // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr4:42399798-42404504 (+) // 98.45 // p13"]
["11751074_x_at",0.11443043,-0.104701996,-0.22939396,0.18526936,-0.07293892,0.07293892,0.6573002,0.34181738,-1.0980763,-0.13497835,1.0980763,"down","ARHGDIA",396,"0006916 // anti-apoptosis // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0007162 // negative regulation of cell adhesion // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // inferred from electronic annotation /// 0007266 // Rho protein signal transduction // traceable author statement /// 0032880 // regulation of protein localization // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050770 // regulation of axonogenesis // traceable author statement /// 0050771 // negative regulation of axonogenesis // traceable author statement /// 0050772 // positive regulation of axonogenesis // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0001772 // immunological synapse // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement","0005094 // Rho GDP-dissociation inhibitor activity // inferred from electronic annotation /// 0005094 // Rho GDP-dissociation inhibitor activity // traceable author statement /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr17:79825672-79829252 (-) // 97.3 // q25.3"]
["11729181_at",-0.0131902695,-0.14641428,0.0038051605,0.18856573,-0.0038056374,0.17528248,0.3499291,0.09255279,-1.1265781,-0.17194732,1.1265781,"down","DHRSX",207063,"0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0000228 // nuclear chromosome // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004803 // transposase activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chrX:2137546-2419015 (-) // 80.53 // p22.33 /// chrY:2087546-2369015 (-) // 80.53 // p11.32"]
["11721278_s_at",0.16341305,-0.016105652,-0.096450806,0.102781296,-0.06059265,0.016105652,0.9925424,0.97937816,-1.00172,-0.0024792342,1.00172,"down","SUV39H1",6839,"0000183 // chromatin silencing at rDNA // inferred from direct assay /// 0006325 // chromatin organization // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006364 // rRNA processing // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016571 // histone methylation // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0034968 // histone lysine methylation // inferred from direct assay /// 0034968 // histone lysine methylation // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051567 // histone H3-K9 methylation // inferred from direct assay /// 0051567 // histone H3-K9 methylation // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000792 // heterochromatin // inferred from direct assay /// 0000792 // heterochromatin // inferred from electronic annotation /// 0000794 // condensed nuclear chromosome // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005677 // chromatin silencing complex // inferred from direct assay /// 0005677 // chromatin silencing complex // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0033553 // rDNA heterochromatin // inferred from direct assay","0003682 // chromatin binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008757 // S-adenosylmethionine-dependent methyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from direct assay /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0042054 // histone methyltransferase activity // inferred from direct assay /// 0046974 // histone methyltransferase activity (H3-K9 specific) // inferred from direct assay /// 0046974 // histone methyltransferase activity (H3-K9 specific) // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction","chrX:48554923-48567407 (+) // 89.98 // p11.23"]
["11751556_a_at",0.121819496,0.09280014,0.118703365,-0.09280014,-0.21779728,-0.24357128,0.07009711,0.0033744427,1.2275915,0.29583058,1.2275915,"up","NUDT13",25961,"","0005739 // mitochondrion // inferred from electronic annotation","0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:74870279-74890700 (+) // 99.91 // q22.1"]
["11715105_at",-0.54202175,-0.21560049,-0.009082079,0.16027212,0.009082079,0.12125206,0.35396767,0.09467802,-1.2767153,-0.3524368,1.2767153,"down","C17orf78",284099,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr17:35732984-35749660 (+) // 98.15 // q12"]
["11740848_a_at",-0.25405955,0.15467548,0.020442009,-0.020442009,-0.13861799,0.15769362,0.9538428,0.86973137,-1.0180854,-0.025858527,1.0180854,"down","SLC30A10",55532,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006829 // zinc ion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008324 // cation transmembrane transporter activity // inferred from electronic annotation","chr1:220087605-220101993 (-) // 98.26 // q41"]
["11731270_a_at",-0.13973117,0.06670952,0.010611534,-0.060880423,-0.010611296,0.31924868,0.7608999,0.48405227,-1.0742941,-0.10338899,1.0742941,"down","MGAM",8972,"0005975 // carbohydrate metabolic process // traceable author statement /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005983 // starch catabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0044245 // polysaccharide digestion // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation","0003824 // catalytic activity // traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004339 // glucan 1,4-alpha-glucosidase activity // inferred from electronic annotation /// 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds // inferred from electronic annotation /// 0004558 // alpha-glucosidase activity // traceable author statement /// 0004558 // alpha-glucosidase activity // inferred from electronic annotation /// 0016160 // amylase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0032450 // maltose alpha-glucosidase activity // inferred from electronic annotation","chr7:141607612-141806547 (+) // 99.51 // q34"]
["11716332_a_at",0.2312603,0.13700485,0.05541897,-0.05541897,-0.096001625,-0.22107124,0.16363908,0.020321129,1.2019626,0.265392,1.2019626,"up","RPL28",6158,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr19:55896712-55903460 (+) // 74.45 // q13.42"]
["11735095_at",-0.22010303,0.17646956,0.017275572,-0.11862707,-0.005149603,0.0051493645,0.9310693,0.8131659,1.0215477,0.030756535,1.0215477,"up","LEP",3952,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001542 // ovulation from ovarian follicle // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001819 // positive regulation of cytokine production // inferred from electronic annotation /// 0001890 // placenta development // inferred from direct assay /// 0001932 // regulation of protein phosphorylation // inferred from electronic annotation /// 0002021 // response to dietary excess // inferred from electronic annotation /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006111 // regulation of gluconeogenesis // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006114 // glycerol biosynthetic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007260 // tyrosine phosphorylation of STAT protein // inferred from electronic annotation /// 0007565 // female pregnancy // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0008206 // bile acid metabolic process // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008343 // adult feeding behavior // inferred from sequence or structural similarity /// 0008343 // adult feeding behavior // inferred from electronic annotation /// 0009062 // fatty acid catabolic process // inferred from electronic annotation /// 0009892 // negative regulation of metabolic process // inferred from electronic annotation /// 0019222 // regulation of metabolic process // inferred from electronic annotation /// 0021954 // central nervous system neuron development // inferred from electronic annotation /// 0030073 // insulin secretion // inferred from electronic annotation /// 0030300 // regulation of intestinal cholesterol absorption // inferred from electronic annotation /// 0032099 // negative regulation of appetite // inferred from sequence or structural similarity /// 0032099 // negative regulation of appetite // inferred from electronic annotation /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0033197 // response to vitamin E // inferred from electronic annotation /// 0033210 // leptin-mediated signaling pathway // inferred from electronic annotation /// 0033686 // positive regulation of luteinizing hormone secretion // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0035630 // bone mineralization involved in bone maturation // inferred from electronic annotation /// 0042307 // positive regulation of protein import into nucleus // inferred from electronic annotation /// 0042445 // hormone metabolic process // inferred from electronic annotation /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from electronic annotation /// 0042755 // eating behavior // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043270 // positive regulation of ion transport // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0045639 // positive regulation of myeloid cell differentiation // inferred from electronic annotation /// 0045906 // negative regulation of vasoconstriction // inferred from electronic annotation /// 0046427 // positive regulation of JAK-STAT cascade // inferred from electronic annotation /// 0046628 // positive regulation of insulin receptor signaling pathway // inferred from electronic annotation /// 0046881 // positive regulation of follicle-stimulating hormone secretion // inferred from electronic annotation /// 0048639 // positive regulation of developmental growth // inferred from direct assay /// 0050796 // regulation of insulin secretion // inferred from electronic annotation /// 0050810 // regulation of steroid biosynthetic process // inferred from electronic annotation /// 0050867 // positive regulation of cell activation // inferred from electronic annotation /// 0050901 // leukocyte tethering or rolling // inferred from electronic annotation /// 0051956 // negative regulation of amino acid transport // inferred from electronic annotation /// 0060587 // regulation of lipoprotein lipid oxidation // inferred from electronic annotation /// 0060612 // adipose tissue development // inferred from electronic annotation /// 0061037 // negative regulation of cartilage development // inferred from electronic annotation /// 0070093 // negative regulation of glucagon secretion // inferred from electronic annotation /// 0071298 // cellular response to L-ascorbic acid // inferred from electronic annotation /// 0071300 // cellular response to retinoic acid // inferred from electronic annotation /// 2000366 // positive regulation of STAT protein import into nucleus // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from sequence or structural similarity /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005622 // intracellular // inferred from electronic annotation","0005179 // hormone activity // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation /// 0051428 // peptide hormone receptor binding // inferred from electronic annotation","chr7:127892041-127897681 (+) // 82.25 // q32.1"]
["11721154_a_at",-0.18985939,-0.091781616,-0.099544525,0.32734394,0.16370487,0.091781616,0.1346764,0.013676219,-1.2494894,-0.32133868,1.2494894,"down","STK3",6788,"0001841 // neural tube formation // inferred from electronic annotation /// 0003157 // endocardium development // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // inferred from direct assay /// 0007417 // central nervous system development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0035329 // hippo signaling cascade // inferred from direct assay /// 0035329 // hippo signaling cascade // traceable author statement /// 0035329 // hippo signaling cascade // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from sequence or structural similarity /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0046621 // negative regulation of organ growth // inferred from electronic annotation /// 0060215 // primitive hemopoiesis // inferred from electronic annotation /// 0060706 // cell differentiation involved in embryonic placenta development // inferred from electronic annotation /// 0071902 // positive regulation of protein serine/threonine kinase activity // inferred from direct assay /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from mutant phenotype /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // not recorded /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0043539 // protein serine/threonine kinase activator activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from sequence or structural similarity","chr8:99466860-99837950 (-) // 97.39 // q22.2"]
["11761389_at",-0.2823379,-0.00856781,0.00856781,-0.060901165,0.044543266,0.43702364,0.5790731,0.2593061,-1.176364,-0.23433447,1.176364,"down","CD3G",917,"0006461 // protein complex assembly // non-traceable author statement /// 0007163 // establishment or maintenance of cell polarity // inferred from mutant phenotype /// 0007166 // cell surface receptor signaling pathway // inferred from mutant phenotype /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0015031 // protein transport // inferred from mutant phenotype /// 0031295 // T cell costimulation // traceable author statement /// 0042110 // T cell activation // non-traceable author statement /// 0042981 // regulation of apoptotic process // inferred from mutant phenotype /// 0050776 // regulation of immune response // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042101 // T cell receptor complex // non-traceable author statement /// 0042105 // alpha-beta T cell receptor complex // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from mutant phenotype /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0030159 // receptor signaling complex scaffold activity // non-traceable author statement /// 0042608 // T cell receptor binding // non-traceable author statement /// 0046982 // protein heterodimerization activity // inferred from physical interaction","chr11:118215058-118220913 (+) // 84.62 // q23.3"]
["11733691_a_at",0.13107634,-0.060292244,-0.10665727,-0.07469392,0.060292006,0.06998563,0.9016288,0.7421667,-1.0213559,-0.030485626,1.0213559,"down","SIGLEC7",27036,"0007155 // cell adhesion // inferred from electronic annotation","0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // traceable author statement","chr19:51645557-51656783 (+) // 84.08 // q13.41"]
["11760793_x_at",0.016970158,-0.021491528,0.038667202,-0.016621113,0.016621113,-0.021142483,0.7268689,0.4345321,1.0128562,0.018429426,1.0128562,"up","TBC1D26",353149,"0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation","chr17:15635596-15647766 (+) // 93.39 // p12"]
["11746697_a_at",-0.32873917,-0.47664452,-0.49908447,0.3626938,0.32873917,0.35993195,0.020465193,0.00013517051,-1.723424,-0.7852776,1.723424,"down","SLC3A2",6520,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006816 // calcium ion transport // non-traceable author statement /// 0006865 // amino acid transport // traceable author statement /// 0006865 // amino acid transport // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0015804 // neutral amino acid transport // inferred from electronic annotation /// 0015827 // tryptophan transport // inferred from sequence or structural similarity /// 0016049 // cell growth // non-traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0060356 // leucine import // inferred from sequence or structural similarity /// 0060356 // leucine import // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0005432 // calcium:sodium antiporter activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0015175 // neutral amino acid transmembrane transporter activity // inferred from sequence or structural similarity /// 0015175 // neutral amino acid transmembrane transporter activity // inferred from electronic annotation /// 0043169 // cation binding // inferred from electronic annotation","chr11:62648371-62656299 (+) // 95.22 // q12.3"]
["11720207_a_at",-0.3154626,0.054044247,-0.13105631,-0.054044247,0.2190671,0.2260499,0.42664358,0.13762808,-1.1984606,-0.26118246,1.1984606,"down","IL2RG",3561,"0006955 // immune response // traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0035771 // interleukin-4-mediated signaling pathway // traceable author statement /// 0038110 // interleukin-2-mediated signaling pathway // traceable author statement /// 0038111 // interleukin-7-mediated signaling pathway // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004896 // cytokine receptor activity // inferred from electronic annotation /// 0004911 // interleukin-2 receptor activity // traceable author statement /// 0004913 // interleukin-4 receptor activity // traceable author statement /// 0004917 // interleukin-7 receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019976 // interleukin-2 binding // inferred from sequence or structural similarity","chrX:70327253-70331425 (-) // 90.97 // q13.1"]
["11742554_at",-0.09797454,0.024736166,-0.010167122,-0.09291649,0.010167122,0.12048912,0.83199424,0.60297054,-1.0283859,-0.040381704,1.0283859,"down","OR13C4",138804,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr9:107288533-107289490 (-) // 100.0 // q31.1"]
["11728953_a_at",-0.041991472,-0.03914547,0.3713541,-0.21542358,0.03914547,0.04488039,0.7268143,0.43441242,1.1023164,0.14053835,1.1023164,"up","GPR98",84059,"0007154 // cell communication // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // non-traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007399 // nervous system development // non-traceable author statement /// 0007601 // visual perception // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from mutant phenotype /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0016337 // cell-cell adhesion // non-traceable author statement /// 0045494 // photoreceptor cell maintenance // inferred from mutant phenotype /// 0048496 // maintenance of organ identity // inferred from mutant phenotype /// 0048839 // inner ear development // inferred from electronic annotation /// 0050877 // neurological system process // inferred from mutant phenotype /// 0050877 // neurological system process // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050910 // detection of mechanical stimulus involved in sensory perception of sound // inferred from electronic annotation /// 0050953 // sensory perception of light stimulus // inferred from mutant phenotype /// 0060122 // inner ear receptor stereocilium organization // inferred from electronic annotation","0002142 // stereocilia ankle link complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // non-traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0017022 // myosin binding // inferred from electronic annotation","chr5:89854616-90460254 (+) // 99.59 // q14.3"]
["11739631_at",-0.19470501,0.054306746,0.08981085,-0.3263712,-0.054306746,0.13476038,0.88510084,0.7066154,1.0461648,0.065110065,1.0461648,"up","RPGR",6103,"0006886 // intracellular protein transport // traceable author statement /// 0007601 // visual perception // inferred from mutant phenotype /// 0007601 // visual perception // inferred from electronic annotation /// 0030030 // cell projection organization // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from mutant phenotype /// 0042462 // eye photoreceptor cell development // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0001750 // photoreceptor outer segment // inferred from direct assay /// 0005622 // intracellular // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chrX:38143661-38186787 (-) // 70.77 // p11.4"]
["11754755_a_at",0.047293186,-0.04231596,-0.0034837723,0.006948471,-0.078445435,0.0034832954,0.8170482,0.575975,1.0161892,0.023169061,1.0161892,"up","POLR3B",55703,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0006385 // transcription elongation from RNA polymerase III promoter // traceable author statement /// 0006386 // termination of RNA polymerase III transcription // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0032728 // positive regulation of interferon-beta production // inferred from mutant phenotype /// 0045087 // innate immune response // inferred from electronic annotation /// 0045089 // positive regulation of innate immune response // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0032549 // ribonucleoside binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:106830833-106903974 (+) // 96.97 // q23.3"]
["11729284_x_at",-0.01134491,0.016863346,0.00874424,-0.00874424,-0.07731676,0.01946354,0.7160678,0.41881284,1.0188583,0.026953438,1.0188583,"up","MEF2B /// MEF2BNB /// MEF2BNB-MEF2B","100271849 /// 4207 /// 729991","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007507 // heart development // inferred from expression pattern /// 0007517 // muscle organ development // traceable author statement","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr19:19256375-19281098 (-) // 95.2 // p13.11"]
["11754786_s_at",-0.25520134,-0.07962704,0.07962656,-0.30370283,0.13220596,0.25362778,0.8278601,0.5948794,-1.0810583,-0.11244428,1.0810583,"down","MXRA8",54587,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:1288071-1297183 (-) // 93.67 // p36.33"]
["11733755_at",-0.11781359,0.13002157,-0.09583044,0.045928,-0.0335927,0.0335927,0.84690875,0.63020504,-1.030385,-0.04318352,1.030385,"down","PKD2L1",9033,"0001581 // detection of chemical stimulus involved in sensory perception of sour taste // inferred from sequence or structural similarity /// 0001581 // detection of chemical stimulus involved in sensory perception of sour taste // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from sequence or structural similarity /// 0006812 // cation transport // inferred from electronic annotation /// 0035725 // sodium ion transmembrane transport // inferred from direct assay /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from direct assay /// 0071468 // cellular response to acidity // inferred from sequence or structural similarity /// 0071468 // cellular response to acidity // inferred from electronic annotation /// 0071805 // potassium ion transmembrane transport // inferred from direct assay","0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from mutant phenotype /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from sequence or structural similarity /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005216 // ion channel activity // inferred from electronic annotation /// 0005227 // calcium activated cation channel activity // inferred from direct assay /// 0005261 // cation channel activity // inferred from direct assay /// 0005261 // cation channel activity // inferred from electronic annotation /// 0005272 // sodium channel activity // inferred from direct assay /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from physical interaction /// 0008324 // cation transmembrane transporter activity // inferred from sequence or structural similarity /// 0008324 // cation transmembrane transporter activity // inferred from electronic annotation /// 0015269 // calcium-activated potassium channel activity // inferred from direct assay /// 0033040 // sour taste receptor activity // inferred from sequence or structural similarity /// 0033040 // sour taste receptor activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from sequence or structural similarity /// 0042802 // identical protein binding // inferred from electronic annotation /// 0051371 // muscle alpha-actinin binding // inferred from physical interaction /// 0051393 // alpha-actinin binding // inferred from physical interaction","chr10:102047905-102090243 (-) // 94.79 // q24.31"]
["11717222_a_at",0.023548126,0.16640377,-0.054223537,0.005426407,-0.011546612,-0.005426407,0.76539356,0.49085853,1.0346133,0.049091574,1.0346133,"up","EXTL3",2137,"0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0015012 // heparan sulfate proteoglycan biosynthetic process // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031227 // intrinsic to endoplasmic reticulum membrane // inferred from electronic annotation","0001888 // glucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016758 // transferase activity, transferring hexosyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:28457985-28611204 (+) // 96.83 // p21.1"]
["11757517_x_at",-0.024895668,0.02810669,-0.04856968,-0.15169239,0.024895668,0.25038147,0.8618478,0.6595215,-1.039806,-0.056314398,1.039806,"down","POR",5447,"0003420 // regulation of growth plate cartilage chondrocyte proliferation // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0009437 // carnitine metabolic process // inferred from electronic annotation /// 0009812 // flavonoid metabolic process // inferred from electronic annotation /// 0018393 // internal peptidyl-lysine acetylation // inferred from electronic annotation /// 0019395 // fatty acid oxidation // inferred from electronic annotation /// 0032332 // positive regulation of chondrocyte differentiation // inferred from electronic annotation /// 0032770 // positive regulation of monooxygenase activity // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0043602 // nitrate catabolic process // inferred from electronic annotation /// 0045542 // positive regulation of cholesterol biosynthetic process // inferred from electronic annotation /// 0045880 // positive regulation of smoothened signaling pathway // inferred from electronic annotation /// 0046210 // nitric oxide catabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060192 // negative regulation of lipase activity // inferred from electronic annotation /// 0070988 // demethylation // inferred from electronic annotation /// 0071371 // cellular response to gonadotropin stimulus // inferred from electronic annotation /// 0071372 // cellular response to follicle-stimulating hormone stimulus // inferred from electronic annotation /// 0071375 // cellular response to peptide hormone stimulus // inferred from electronic annotation /// 0090031 // positive regulation of steroid hormone biosynthetic process // inferred from electronic annotation /// 0090181 // regulation of cholesterol metabolic process // inferred from electronic annotation /// 0090346 // cellular organofluorine metabolic process // inferred from direct assay","0005624 // membrane fraction // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from direct assay /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0003958 // NADPH-hemoprotein reductase activity // inferred from direct assay /// 0003958 // NADPH-hemoprotein reductase activity // traceable author statement /// 0003958 // NADPH-hemoprotein reductase activity // inferred from electronic annotation /// 0004128 // cytochrome-b5 reductase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0010181 // FMN binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0047726 // iron-cytochrome-c reductase activity // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation /// 0050661 // NADP binding // inferred from electronic annotation","chr7:75615812-75616172 (+) // 89.33 // q11.23"]
["11747400_a_at",-0.10669136,-0.10985756,-0.12716293,0.10669136,0.1183033,0.24935722,0.07660313,0.0041174474,-1.2080564,-0.27268785,1.2080564,"down","COPS7A",50813,"0010388 // cullin deneddylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008180 // signalosome // inferred from direct assay /// 0008180 // signalosome // inferred from electronic annotation","","chr12:6833425-6841000 (+) // 100.0 // p13.31"]
["11718961_a_at",0.14178514,0.030148983,-0.2658143,0.08762169,-0.16525602,-0.03014946,0.99155366,0.97550404,1.0032176,0.0046345317,1.0032176,"up","NUFIP2",57532,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0042788 // polysomal ribosome // inferred from direct assay","0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr17:27582857-27621166 (-) // 94.03 // q11.2"]
["11763683_a_at",0.18428898,0.006968498,-0.006968498,0.09804821,-0.113245964,-0.14114857,0.6273325,0.30859834,1.0818834,0.11354506,1.0818834,"up","ARL6IP4",51329,"0008380 // RNA splicing // traceable author statement","0005634 // nucleus // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr12:123465701-123466268 (+) // 69.12 // q24.31"]
["11729213_a_at",-0.039935112,-0.13630438,-0.18866777,0.071308136,0.039935112,0.16244125,0.16308162,0.020199033,-1.1589867,-0.212864,1.1589867,"down","PCBP2",5094,"0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016071 // mRNA metabolic process // non-traceable author statement /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0050687 // negative regulation of defense response to virus // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr12:53845885-53874945 (+) // 91.59 // q13.13"]
["11741847_a_at",-0.14702201,0.051185846,0.010630846,-0.010630846,-0.115763426,0.08151841,0.95739627,0.87930435,-1.0093616,-0.013443142,1.0093616,"down","C2orf83",56918,"0006810 // transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation","0005542 // folic acid binding // inferred from electronic annotation /// 0008518 // reduced folate carrier activity // inferred from electronic annotation","chr2:228474805-228497888 (-) // 78.57 // q36.3"]
["11756596_a_at",-0.24687338,-0.15271807,0.04543066,-0.04543066,0.057127,0.06394577,0.50996846,0.1987633,-1.1044037,-0.14326768,1.1044037,"down","PDPR",55066,"0006090 // pyruvate metabolic process // traceable author statement /// 0006546 // glycine catabolic process // inferred from electronic annotation /// 0010510 // regulation of acetyl-CoA biosynthetic process from pyruvate // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0004047 // aminomethyltransferase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation","chr16:70154033-70192230 (+) // 94.27 // q22.1"]
["11715930_at",-0.04236698,-0.067308426,-0.022390366,0.031094551,0.022390366,0.042377472,0.090394676,0.0059183394,-1.0540739,-0.07597606,1.0540739,"down","SDHAF2",54949,"0006121 // mitochondrial electron transport, succinate to ubiquinone // inferred from mutant phenotype /// 0018293 // protein-FAD linkage // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr11:61197521-61214985 (+) // 89.99 // q12.2"]
["11735126_at",-0.0056180954,0.09145403,0.0926218,0.0056180954,-0.15935755,-0.12961149,0.28915295,0.063134216,1.1126009,0.1539362,1.1126009,"up","N4BP3",23138,"","0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","","chr5:177540443-177553402 (+) // 89.16 // q35.3"]
["11762111_x_at",0.07488632,0.101121426,0.030724525,-0.26000166,-0.030724525,-0.11658001,0.23792262,0.043002315,1.1524303,0.20467949,1.1524303,"up","EGFL8 /// PPT2 /// PPT2-EGFL8","100532746 /// 80864 /// 9374","0001701 // in utero embryonic development // inferred from sequence or structural similarity /// 0006464 // cellular protein modification process // non-traceable author statement /// 0006464 // cellular protein modification process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005764 // lysosome // non-traceable author statement /// 0005764 // lysosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0016021 // integral to membrane // non-traceable author statement","0005509 // calcium ion binding // inferred from electronic annotation /// 0008474 // palmitoyl-(protein) hydrolase activity // non-traceable author statement /// 0008474 // palmitoyl-(protein) hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016790 // thiolester hydrolase activity // non-traceable author statement","chr6:32121921-32134334 (+) // 99.61 // p21.32"]
["11745398_a_at",0.014796734,0.3784814,-0.014796257,-0.43799782,-0.03767109,0.09847498,0.6057503,0.28595653,1.1907676,0.2518919,1.1907676,"up","NF1",4763,"0000165 // MAPK cascade // inferred from sequence or structural similarity /// 0000165 // MAPK cascade // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from sequence or structural similarity /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001656 // metanephros development // inferred from sequence or structural similarity /// 0001656 // metanephros development // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from sequence or structural similarity /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001889 // liver development // inferred from sequence or structural similarity /// 0001889 // liver development // inferred from electronic annotation /// 0001937 // negative regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001937 // negative regulation of endothelial cell proliferation // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // inferred from electronic annotation /// 0001952 // regulation of cell-matrix adhesion // inferred from sequence or structural similarity /// 0001952 // regulation of cell-matrix adhesion // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // inferred from sequence or structural similarity /// 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0007154 // cell communication // inferred from sequence or structural similarity /// 0007154 // cell communication // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // inferred from sequence or structural similarity /// 0007265 // Ras protein signal transduction // inferred from electronic annotation /// 0007406 // negative regulation of neuroblast proliferation // inferred from sequence or structural similarity /// 0007406 // negative regulation of neuroblast proliferation // inferred from electronic annotation /// 0007420 // brain development // inferred from sequence or structural similarity /// 0007420 // brain development // inferred from electronic annotation /// 0007422 // peripheral nervous system development // inferred from sequence or structural similarity /// 0007422 // peripheral nervous system development // inferred from electronic annotation /// 0007507 // heart development // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008542 // visual learning // inferred from sequence or structural similarity /// 0008542 // visual learning // inferred from electronic annotation /// 0014044 // Schwann cell development // inferred from sequence or structural similarity /// 0014044 // Schwann cell development // inferred from electronic annotation /// 0014065 // phosphatidylinositol 3-kinase cascade // inferred from sequence or structural similarity /// 0014065 // phosphatidylinositol 3-kinase cascade // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from electronic annotation /// 0021510 // spinal cord development // inferred from sequence or structural similarity /// 0021510 // spinal cord development // inferred from electronic annotation /// 0021897 // forebrain astrocyte development // inferred from sequence or structural similarity /// 0021897 // forebrain astrocyte development // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from sequence or structural similarity /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0022011 // myelination in peripheral nervous system // inferred from sequence or structural similarity /// 0022011 // myelination in peripheral nervous system // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from sequence or structural similarity /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from sequence or structural similarity /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030199 // collagen fibril organization // inferred from sequence or structural similarity /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0030325 // adrenal gland development // inferred from sequence or structural similarity /// 0030325 // adrenal gland development // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from mutant phenotype /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0032228 // regulation of synaptic transmission, GABAergic // inferred from electronic annotation /// 0032318 // regulation of Ras GTPase activity // inferred from mutant phenotype /// 0032320 // positive regulation of Ras GTPase activity // inferred from direct assay /// 0032320 // positive regulation of Ras GTPase activity // inferred from mutant phenotype /// 0032320 // positive regulation of Ras GTPase activity // inferred from sequence or structural similarity /// 0032320 // positive regulation of Ras GTPase activity // inferred from electronic annotation /// 0035021 // negative regulation of Rac protein signal transduction // inferred from electronic annotation /// 0042060 // wound healing // inferred from sequence or structural similarity /// 0042060 // wound healing // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042992 // negative regulation of transcription factor import into nucleus // inferred from sequence or structural similarity /// 0042992 // negative regulation of transcription factor import into nucleus // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from sequence or structural similarity /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043407 // negative regulation of MAP kinase activity // inferred from sequence or structural similarity /// 0043407 // negative regulation of MAP kinase activity // inferred from electronic annotation /// 0043409 // negative regulation of MAPK cascade // inferred from mutant phenotype /// 0043409 // negative regulation of MAPK cascade // inferred from sequence or structural similarity /// 0043409 // negative regulation of MAPK cascade // inferred from electronic annotation /// 0043473 // pigmentation // inferred from sequence or structural similarity /// 0043473 // pigmentation // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from sequence or structural similarity /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0043535 // regulation of blood vessel endothelial cell migration // inferred from mutant phenotype /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0045124 // regulation of bone resorption // inferred from sequence or structural similarity /// 0045124 // regulation of bone resorption // inferred from electronic annotation /// 0045685 // regulation of glial cell differentiation // inferred from sequence or structural similarity /// 0045685 // regulation of glial cell differentiation // inferred from electronic annotation /// 0045762 // positive regulation of adenylate cyclase activity // inferred from sequence or structural similarity /// 0045762 // positive regulation of adenylate cyclase activity // inferred from electronic annotation /// 0045765 // regulation of angiogenesis // inferred from mutant phenotype /// 0045765 // regulation of angiogenesis // inferred from electronic annotation /// 0046580 // negative regulation of Ras protein signal transduction // not recorded /// 0046580 // negative regulation of Ras protein signal transduction // inferred from electronic annotation /// 0046929 // negative regulation of neurotransmitter secretion // inferred from electronic annotation /// 0048147 // negative regulation of fibroblast proliferation // inferred from electronic annotation /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048485 // sympathetic nervous system development // inferred from sequence or structural similarity /// 0048485 // sympathetic nervous system development // inferred from electronic annotation /// 0048593 // camera-type eye morphogenesis // inferred from sequence or structural similarity /// 0048593 // camera-type eye morphogenesis // inferred from electronic annotation /// 0048712 // negative regulation of astrocyte differentiation // inferred from electronic annotation /// 0048715 // negative regulation of oligodendrocyte differentiation // inferred from sequence or structural similarity /// 0048715 // negative regulation of oligodendrocyte differentiation // inferred from electronic annotation /// 0048745 // smooth muscle tissue development // inferred from sequence or structural similarity /// 0048745 // smooth muscle tissue development // inferred from electronic annotation /// 0048844 // artery morphogenesis // inferred from sequence or structural similarity /// 0048844 // artery morphogenesis // inferred from electronic annotation /// 0048853 // forebrain morphogenesis // inferred from sequence or structural similarity /// 0048853 // forebrain morphogenesis // inferred from electronic annotation /// 0050890 // cognition // inferred from mutant phenotype /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // not recorded /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030424 // axon // inferred from direct assay /// 0030425 // dendrite // inferred from direct assay /// 0031235 // intrinsic to internal side of plasma membrane // not recorded","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005099 // Ras GTPase activator activity // inferred from direct assay /// 0005099 // Ras GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr17:29421944-29546377 (+) // 90.31 // q11.2"]
["11759489_s_at",-0.19757223,-0.079398155,0.15111446,-0.1261921,0.079398155,0.26315498,0.7682211,0.4949151,-1.0822788,-0.114072256,1.0822788,"down","TXNL1",9352,"0006662 // glycerol ether metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0045454 // cell redox homeostasis // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0009055 // electron carrier activity // inferred from electronic annotation /// 0015035 // protein disulfide oxidoreductase activity // inferred from electronic annotation /// 0015036 // disulfide oxidoreductase activity // inferred from direct assay","chr18:54275509-54305933 (-) // 72.91 // q21.31"]
["11733453_at",0.11882734,-0.131248,0.06423521,0.06328869,-0.07166004,-0.06328821,0.8634598,0.6628349,1.0289394,0.04115797,1.0289394,"up","IRX5",10265,"0002027 // regulation of heart rate // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0042551 // neuron maturation // inferred from electronic annotation /// 0048468 // cell development // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0060040 // retinal bipolar neuron differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005499 // vitamin D binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr16:54965110-54968397 (+) // 93.75 // q12.2"]
["11755273_a_at",-0.22212982,-0.0705452,0.09142065,-0.03374672,0.03374672,0.14495182,0.64803135,0.33121166,-1.0832769,-0.11540202,1.0832769,"down","C16orf71",146562,"","","","chr16:4784502-4799395 (+) // 96.45 // p13.3"]
["11756013_a_at",-0.04057455,-0.25109148,-0.11164999,0.19722033,0.066679,0.04057455,0.22877443,0.039808,-1.1776656,-0.23592992,1.1776656,"down","BCL2L10",10017,"0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from direct assay /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // traceable author statement /// 0007283 // spermatogenesis // traceable author statement /// 0007292 // female gamete generation // traceable author statement /// 0042981 // regulation of apoptotic process // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr15:52401946-52404965 (-) // 100.0 // q21.2"]
["11733859_s_at",0.0033388138,-0.0033388138,-0.024808407,-0.09640026,0.34344912,0.080863,0.7098466,0.41047546,-1.0849085,-0.11757335,1.0849085,"down","CLASP2",23122,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007020 // microtubule nucleation // inferred from mutant phenotype /// 0007026 // negative regulation of microtubule depolymerization // non-traceable author statement /// 0007026 // negative regulation of microtubule depolymerization // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007163 // establishment or maintenance of cell polarity // traceable author statement /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0016477 // cell migration // inferred from electronic annotation /// 0031023 // microtubule organizing center organization // inferred from mutant phenotype /// 0031110 // regulation of microtubule polymerization or depolymerization // inferred from mutant phenotype /// 0032886 // regulation of microtubule-based process // inferred from mutant phenotype /// 0034453 // microtubule anchoring // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005828 // kinetochore microtubule // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation /// 0005881 // cytoplasmic microtubule // inferred from direct assay /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005938 // cell cortex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from direct assay /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from electronic annotation /// 0008107 // galactoside 2-alpha-L-fucosyltransferase activity // non-traceable author statement /// 0051010 // microtubule plus-end binding // inferred from direct assay","chr3:33537680-33760236 (-) // 97.85 // p22.3"]
["11725412_s_at",-0.14044952,-0.11015129,-0.009864807,0.023039818,0.009864807,0.077207565,0.2574915,0.050081592,-1.0893941,-0.12352595,1.0893941,"down","TRIM14",9830,"","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:100846468-100881695 (-) // 79.6 // q22.33"]
["11738413_a_at",-0.020152092,0.020152092,0.28814983,-0.087991714,0.12001753,-0.23636293,0.62912965,0.31073743,1.1205152,0.16416225,1.1205152,"up","PUS10",150962,"0001522 // pseudouridine synthesis // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from electronic annotation /// 0009451 // RNA modification // inferred from electronic annotation","","0003723 // RNA binding // inferred from electronic annotation /// 0009982 // pseudouridine synthase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation","chr2:61167548-61245365 (-) // 94.35 // p16.1"]
["11746945_a_at",-0.18703556,-0.026356697,-0.11740208,0.026356697,0.04720497,0.17490482,0.23652998,0.042488724,-1.1432072,-0.19308689,1.1432072,"down","UBL4A",8266,"0006464 // cellular protein modification process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0071816 // tail-anchored membrane protein insertion into ER membrane // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0071818 // BAT3 complex // inferred from direct assay","0019787 // small conjugating protein ligase activity // traceable author statement","chrX:153713536-153714923 (-) // 99.53 // q28"]
["11734004_x_at",-0.25032902,-0.24337578,-0.24549103,0.24337578,0.3202629,0.30624294,0.012595721,2.2694992e-5,-1.4503078,-0.53635913,1.4503078,"down","TMEM192 /// ZNF320","162967 /// 201931","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:165997230-166034071 (-) // 71.47 // q32.3"]
["11719521_at",0.25899696,0.20214987,0.075713634,-0.55036974,-0.4578185,-0.075713634,0.1824602,0.02524653,1.4542286,0.5402541,1.4542286,"up","SEMA5A",9037,"0001569 // patterning of blood vessels // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0008046 // axon guidance receptor activity // inferred from electronic annotation","chr5:9035141-9546233 (-) // 95.93 // p15.31"]
["11747003_x_at",-0.11688471,-0.0036320686,-0.37489367,0.4576125,0.32019472,0.0036320686,0.3040027,0.07030874,-1.3431464,-0.4256166,1.3431464,"down","LRRC31",79782,"","","","chr3:169556966-169587723 (-) // 99.04 // q26.2"]
["11755972_a_at",0.20831394,0.0013256073,-0.0013256073,0.22136497,-0.052135468,-0.16699028,0.8499412,0.6364385,1.0487651,0.06869153,1.0487651,"up","MGEA5",10724,"0006044 // N-acetylglucosamine metabolic process // inferred from electronic annotation /// 0006516 // glycoprotein catabolic process // traceable author statement /// 0006612 // protein targeting to membrane // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010524 // positive regulation of calcium ion transport into cytosol // inferred from electronic annotation /// 0010616 // negative regulation of cardiac muscle adaptation // inferred from electronic annotation /// 0016573 // histone acetylation // inferred from electronic annotation /// 0031343 // positive regulation of cell killing // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0043243 // positive regulation of protein complex disassembly // inferred from electronic annotation /// 0045862 // positive regulation of proteolysis // inferred from electronic annotation /// 0046060 // dATP metabolic process // inferred from electronic annotation /// 0046326 // positive regulation of glucose import // inferred from electronic annotation /// 0048545 // response to steroid hormone stimulus // inferred from electronic annotation /// 0051054 // positive regulation of DNA metabolic process // inferred from electronic annotation /// 0051901 // positive regulation of mitochondrial depolarization // inferred from electronic annotation /// 0051928 // positive regulation of calcium ion transport // inferred from electronic annotation /// 0060051 // negative regulation of protein glycosylation // inferred from electronic annotation /// 0060124 // positive regulation of growth hormone secretion // inferred from electronic annotation /// 0070265 // necrotic cell death // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0004415 // hyalurononglucosaminidase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation","chr10:103558999-103578191 (-) // 95.59 // q24.32"]
["11722015_at",1.26441,1.1573772,1.1443224,-1.1443224,-1.2183123,-1.2278881,0.0052464344,8.49711e-7,5.2254095,2.385544,5.2254095,"up","OLR1",4973,"0006508 // proteolysis // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007159 // leukocyte cell-cell adhesion // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008015 // blood circulation // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0042157 // lipoprotein metabolic process // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005041 // low-density lipoprotein receptor activity // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr12:10310899-10324802 (-) // 78.55 // p13.2"]
["11727071_at",-0.25773525,0.09160185,-0.09160185,-0.36488748,0.17872572,0.17280436,0.88758683,0.71341133,-1.0580877,-0.08145922,1.0580877,"down","ENPP6",133121,"0008152 // metabolic process // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0019695 // choline metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0008889 // glycerophosphodiester phosphodiesterase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr4:185009859-185139114 (-) // 91.17 // q35.1"]
["11728657_at",-0.40542912,0.0552752,-0.0552752,0.4575045,-0.06753802,0.24754405,0.46890992,0.16724846,-1.2724831,-0.3476465,1.2724831,"down","IGFBP5",3488,"0001558 // regulation of cell growth // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0014912 // negative regulation of smooth muscle cell migration // inferred from direct assay /// 0017148 // negative regulation of translation // inferred from direct assay /// 0030336 // negative regulation of cell migration // inferred from direct assay /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0043569 // negative regulation of insulin-like growth factor receptor signaling pathway // inferred from direct assay /// 0043569 // negative regulation of insulin-like growth factor receptor signaling pathway // inferred from electronic annotation /// 0048630 // skeletal muscle tissue growth // inferred from electronic annotation /// 0048662 // negative regulation of smooth muscle cell proliferation // inferred from direct assay /// 0051146 // striated muscle cell differentiation // inferred from electronic annotation /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0060056 // mammary gland involution // inferred from electronic annotation /// 0071320 // cellular response to cAMP // inferred from direct assay /// 0071407 // cellular response to organic cyclic compound // inferred from direct assay","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0016942 // insulin-like growth factor binding protein complex // inferred by curator","0001968 // fibronectin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005520 // insulin-like growth factor binding // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from electronic annotation /// 0031994 // insulin-like growth factor I binding // inferred from physical interaction","chr2:217536827-217560272 (-) // 94.34 // q35"]
["11735458_a_at",-0.2460556,-0.031738997,0.18148828,-0.43641067,0.031738997,0.18593192,0.95123947,0.86438656,1.028692,0.0408111,1.028692,"up","FBXO39",162517,"","","","chr17:6679541-6690965 (+) // 95.07 // p13.1"]
["11726666_a_at",0.041721344,0.0005517006,-0.0005517006,-0.045336246,0.069858074,-0.0030536652,0.9503491,0.86190796,1.0046904,0.0067510093,1.0046904,"up","MFSD8",256471,"0006810 // transport // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","","chr4:128838960-128887139 (-) // 92.95 // q28.2"]
["11726448_at",-0.51885414,-0.032359123,0.28367567,-0.028844833,0.060801506,0.028844833,0.86451584,0.66547537,-1.0788141,-0.10944635,1.0788141,"down","ZNF614",80110,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:52516762-52531926 (-) // 69.5 // q13.41"]
["11731855_at",-0.04975462,-0.039742947,-0.056979895,0.039743185,0.083449125,0.23167562,0.24490152,0.045618765,-1.1228111,-0.1671152,1.1228111,"down","C10orf107",219621,"","","","chr10:63422541-63526524 (+) // 94.67 // q21.2"]
["11734547_a_at",-0.32150698,-0.027893066,-0.24527407,0.1704197,0.027893066,0.097042084,0.22223909,0.037843645,-1.2283114,-0.29667637,1.2283114,"down","TGM4",7047,"0018149 // peptide cross-linking // non-traceable author statement /// 0018149 // peptide cross-linking // inferred from electronic annotation /// 0018184 // protein polyamination // non-traceable author statement","","0003810 // protein-glutamine gamma-glutamyltransferase activity // non-traceable author statement /// 0003810 // protein-glutamine gamma-glutamyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:44916097-44956086 (+) // 96.08 // p21.31"]
["11740693_a_at",-0.021157742,-0.01607132,0.016070843,-0.10420942,0.02508831,0.18514252,0.8529518,0.6422134,-1.0298207,-0.042393148,1.0298207,"down","FAM83C",128876,"","","","chr20:33873286-33880225 (-) // 87.15 // q11.22"]
["11722354_at",-0.023777008,-0.07796478,0.034496307,0.023777008,0.09614849,-0.037516594,0.68579453,0.37886348,-1.0351822,-0.049884766,1.0351822,"down","SEC23A",10484,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0016192 // vesicle-mediated transport // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0048208 // COPII vesicle coating // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030127 // COPII vesicle coat // inferred from electronic annotation /// 0030868 // smooth endoplasmic reticulum membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation","chr14:39501122-39572732 (-) // 98.24 // q21.1"]
["11717998_a_at",0.08692932,-0.0044374466,-0.03621006,0.07247543,0.0044374466,-0.09409428,0.9031119,0.74554497,1.0147711,0.021154344,1.0147711,"up","MPLKIP",136647,"0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr7:40172344-40174486 (-) // 86.28 // p14.1"]
["11746623_a_at",-0.092069626,0.004566908,0.09656811,-0.13902712,-0.004566908,0.010957718,0.8018717,0.54943514,1.0332819,0.047233935,1.0332819,"up","NR3C2",4306,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006883 // cellular sodium ion homeostasis // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007588 // excretion // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0031959 // mineralocorticoid receptor signaling pathway // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // traceable author statement /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005496 // steroid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0017082 // mineralocorticoid receptor activity // inferred from electronic annotation /// 0042562 // hormone binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr4:149001343-149365850 (-) // 98.55 // q31.23"]
["11716197_a_at",0.028906822,0.28022385,0.05169344,-0.17638874,-0.13542461,-0.028906822,0.28864673,0.06291169,1.1759675,0.23384812,1.1759675,"up","ADIPOR2",79602,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0009755 // hormone-mediated signaling pathway // inferred from sequence or structural similarity /// 0019395 // fatty acid oxidation // inferred from sequence or structural similarity","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0042562 // hormone binding // inferred from sequence or structural similarity /// 0042802 // identical protein binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr12:1800188-1897845 (+) // 96.29 // p13.33"]
["11742047_s_at",0.027720451,-0.147187,-0.18771648,0.04058671,-0.014470816,0.014470816,0.4637163,0.16337797,-1.0836684,-0.11592329,1.0836684,"down","ERMN",57471,"0001763 // morphogenesis of a branching structure // inferred from electronic annotation /// 0007015 // actin filament organization // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0031344 // regulation of cell projection organization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0033269 // internode region of axon // inferred from electronic annotation /// 0033270 // paranode region of axon // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043209 // myelin sheath // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from electronic annotation","chr2:158175125-158184218 (-) // 92.68 // q24.1"]
["11751503_a_at",-0.4852562,0.038954735,0.08049011,-0.6290264,-0.038954735,0.07146406,0.92489463,0.7996795,1.0547506,0.07690185,1.0547506,"up","FGF17",8822,"0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement","0005105 // type 1 fibroblast growth factor receptor binding // inferred from direct assay /// 0005111 // type 2 fibroblast growth factor receptor binding // inferred from direct assay /// 0008083 // growth factor activity // inferred from electronic annotation /// 0008083 // growth factor activity // traceable author statement","chr8:21900425-21906317 (+) // 99.08 // p21.3"]
["11755159_a_at",-0.38212395,-0.22677088,-0.14370441,0.21949959,0.36597633,0.14370441,0.09607793,0.006665818,-1.4082725,-0.49392653,1.4082725,"down","COG3",83548,"0006486 // protein glycosylation // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from direct assay /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // inferred from mutant phenotype /// 0006891 // intra-Golgi vesicle-mediated transport // inferred from direct assay /// 0015031 // protein transport // inferred from direct assay /// 0015031 // protein transport // inferred from electronic annotation /// 0033365 // protein localization to organelle // inferred from mutant phenotype /// 0050821 // protein stabilization // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005801 // cis-Golgi network // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0017119 // Golgi transport complex // inferred from direct assay /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008565 // protein transporter activity // inferred from direct assay","chr13:46039070-46110759 (+) // 96.57 // q14.13"]
["11721924_s_at",0.6924925,0.1431818,0.09727764,-0.20107555,-0.09727764,-0.3810296,0.28474504,0.061403662,1.4513998,0.53744495,1.4513998,"up","PRKCB",5579,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010829 // negative regulation of glucose transport // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0035408 // histone H3-T6 phosphorylation // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042113 // B cell activation // inferred from sequence or structural similarity /// 0042953 // lipoprotein transport // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from sequence or structural similarity /// 0045766 // positive regulation of angiogenesis // inferred from sequence or structural similarity /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0050853 // B cell receptor signaling pathway // inferred from sequence or structural similarity /// 0050861 // positive regulation of B cell receptor signaling pathway // inferred from sequence or structural similarity /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004697 // protein kinase C activity // inferred from electronic annotation /// 0004697 // protein kinase C activity // traceable author statement /// 0005080 // protein kinase C binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from mutant phenotype /// 0035403 // histone kinase activity (H3-T6 specific) // inferred from direct assay /// 0042393 // histone binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050681 // androgen receptor binding // inferred from direct assay","chr16:23846527-24231932 (+) // 90.25 // p12.2"]
["11759355_x_at",-0.44923973,0.23220205,-0.09122467,-0.3976307,0.09122467,0.2020669,0.93107504,0.81334656,-1.0482439,-0.0679744,1.0482439,"down","GPR32",2854,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004982 // N-formyl peptide receptor activity // inferred from electronic annotation","chr19:51273720-51275252 (+) // 84.38 // q13.33"]
["11720638_a_at",0.049905777,0.017354965,-0.11977577,0.12108612,-0.017354965,-0.11963844,0.962755,0.8952306,-1.008494,-0.012202528,1.008494,"down","ACBD6",84320,"","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000062 // fatty-acyl-CoA binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation","chr1:180257364-180472102 (-) // 92.92 // q25.2"]
["11743485_s_at",-0.058535576,-0.2196703,-0.09243059,0.21378517,0.11856747,0.0585351,0.15822738,0.019008428,-1.1923778,-0.25384143,1.1923778,"down","NAA25",80018,"","0005737 // cytoplasm // inferred from electronic annotation","","chr12:112464492-112546826 (-) // 97.81 // q24.13"]
["11762983_a_at",0.3578043,-0.111010075,-0.11092377,0.16250038,0.054359913,-0.054359913,0.9865086,0.96047294,-1.0061718,-0.008876693,1.0061718,"down","MED25",81857,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0035563 // positive regulation of chromatin binding // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048147 // negative regulation of fibroblast proliferation // inferred from mutant phenotype /// 0071158 // positive regulation of cell cycle arrest // inferred from mutant phenotype /// 2001178 // positive regulation of mediator complex assembly // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0042974 // retinoic acid receptor binding // inferred from physical interaction /// 0042974 // retinoic acid receptor binding // inferred from electronic annotation /// 0046965 // retinoid X receptor binding // inferred from physical interaction /// 0046965 // retinoid X receptor binding // inferred from electronic annotation","chr19:50321598-50340219 (+) // 100.0 // q13.33"]
["11731791_a_at",-0.029890537,-0.03761196,0.031282425,0.28702784,0.029890537,-0.22543192,0.9215482,0.7900184,-1.0299461,-0.04256882,1.0299461,"down","SLC27A6",28965,"0000038 // very long-chain fatty acid metabolic process // traceable author statement /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0015909 // long-chain fatty acid transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004467 // long-chain fatty acid-CoA ligase activity // traceable author statement /// 0016874 // ligase activity // inferred from electronic annotation /// 0031957 // very long-chain fatty acid-CoA ligase activity // inferred from electronic annotation","chr5:128300819-128369328 (+) // 96.5 // q23.3"]
["11742685_a_at",0.1769743,0.025568008,0.05060768,-0.025568008,-0.16274261,-0.24121046,0.24129154,0.044213578,1.1708506,0.22755703,1.1708506,"up","LAMP2",3920,"0002576 // platelet degranulation // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement","0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0005770 // late endosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // inferred from electronic annotation /// 0031088 // platelet dense granule membrane // inferred from direct assay /// 0031088 // platelet dense granule membrane // traceable author statement /// 0031902 // late endosome membrane // inferred from direct assay","","chrX:119560002-119603201 (-) // 92.06 // q24"]
["11715314_at",0.2963004,-0.075553894,0.22759199,0.016366959,-0.016366959,-0.028320312,0.55800354,0.239288,1.1164249,0.15888622,1.1164249,"up","","","","","","chr7:66136417-66148154 (+) // 96.52 // q11.21"]
["11747404_a_at",0.19296408,-0.30752277,-0.06851673,0.17561913,-0.14393997,0.06851673,0.83683544,0.6129339,-1.0676389,-0.09442374,1.0676389,"down","ZNF586",54807,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:58281019-58291912 (+) // 99.9 // q13.43"]
["11717364_a_at",-0.012300491,-0.093660355,-0.085954666,0.059993744,0.028720856,0.012300491,0.19709326,0.029543042,-1.0700243,-0.097643495,1.0700243,"down","BCL2L12",83596,"0006915 // apoptotic process // inferred from electronic annotation","","","chr19:50168398-50177173 (+) // 97.73 // q13.33"]
["11727026_a_at",-0.015985489,-0.07574272,0.015985489,0.12344837,0.017705917,-0.16426563,0.9470465,0.85206383,-1.0122347,-0.017543819,1.0122347,"down","NDUFB5",4711,"0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0006120 // mitochondrial electron transport, NADH to ubiquinone // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation","0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement /// 0008137 // NADH dehydrogenase (ubiquinone) activity // traceable author statement","chr3:179322581-179342288 (+) // 90.18 // q26.33"]
["11740871_a_at",0.18463898,-0.0674839,0.00092315674,0.021660805,-0.010586977,-0.00092315674,0.8620609,0.6601397,1.0252501,0.03597585,1.0252501,"up","MS4A7",58475,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr11:60145957-60163424 (+) // 76.67 // q12.2"]
["11742007_x_at",-0.12512064,0.010597229,0.095039845,-0.010597229,-0.031409264,0.13145208,0.87217957,0.6809516,-1.0254874,-0.036309797,1.0254874,"down","KRTAP12-2",353323,"","0005882 // intermediate filament // inferred from electronic annotation /// 0045095 // keratin filament // inferred from electronic annotation","","chr21:46086106-46086844 (-) // 96.98 // q22.3"]
["11757452_x_at",0.2655697,0.120983124,0.057922363,-0.07425785,-0.057922363,-0.27389383,0.22196764,0.037747305,1.217158,0.2835164,1.217158,"up","INO80B",83444,"0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0031011 // Ino80 complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:74684458-74685071 (+) // 84.83 // p13.1"]
["11753433_a_at",0.26059628,0.072333336,0.15558529,-0.137496,-0.072333336,-0.13482428,0.11032696,0.008977656,1.2122799,0.27772287,1.2122799,"up","C1orf216",127703,"","","","chr1:36181068-36184423 (-) // 100.0 // p34.3"]
["11722526_at",-0.09986544,-0.16262388,-0.10235453,0.30464506,0.1577549,0.09986544,0.10829846,0.008613199,-1.2388799,-0.30903634,1.2388799,"down","PTPN21",11099,"0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr14:88932121-89021123 (-) // 97.22 // q31.3"]
["11740913_a_at",-0.030938148,-0.0341053,0.030938148,-0.036569595,0.104907036,0.08760834,0.58783865,0.26841196,-1.0448895,-0.06335031,1.0448895,"down","SKOR1",390598,"0000122 // negative regulation of transcription from RNA polymerase II promoter // not recorded /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // not recorded /// 0030514 // negative regulation of BMP signaling pathway // inferred from direct assay","0005634 // nucleus // not recorded /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded /// 0030425 // dendrite // inferred from direct assay /// 0043025 // neuronal cell body // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0046332 // SMAD binding // inferred from physical interaction /// 0046332 // SMAD binding // inferred from electronic annotation","chr15:68118273-68126174 (+) // 86.78 // q23"]
["11750066_x_at",0.030180454,-0.03248644,-0.114323616,0.05332327,0.0051612854,-0.0051608086,0.6018778,0.28154755,-1.0400487,-0.056651108,1.0400487,"down","FLJ42709",441094,"","","","chr5:92746994-92916713 (-) // 89.21 // q15"]
["11752699_a_at",0.036787033,-0.3272376,-0.17278433,0.08115244,0.03569126,-0.03569126,0.48171464,0.17691264,-1.1340328,-0.18146242,1.1340328,"down","ARHGEF4",50649,"0006915 // apoptotic process // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0030032 // lamellipodium assembly // inferred from mutant phenotype /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // non-traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042060 // wound healing // inferred from direct assay /// 0045787 // positive regulation of cell cycle // inferred from direct assay /// 0046847 // filopodium assembly // inferred from mutant phenotype /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050673 // epithelial cell proliferation // inferred from direct assay /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // non-traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from mutant phenotype /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // non-traceable author statement /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0030676 // Rac guanyl-nucleotide exchange factor activity // inferred from mutant phenotype","chr2:131674537-131804281 (+) // 99.94 // q21.1"]
["11734184_a_at",-0.2704637,0.10061264,-0.008606911,-0.18872666,0.008606911,0.28964853,0.83900136,0.6166952,-1.0688027,-0.095995575,1.0688027,"down","PRDM5",11107,"0000278 // mitotic cell cycle // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016575 // histone deacetylation // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0051567 // histone H3-K9 methylation // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0000976 // transcription regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070491 // repressing transcription factor binding // inferred from direct assay","chr4:121614918-121844013 (-) // 97.37 // q27"]
["11717932_at",-0.13668633,-0.21306229,-0.21720505,0.36844254,0.19833755,0.13668633,0.080269374,0.004633019,-1.3411525,-0.42347333,1.3411525,"down","TBK1",29110,"0002218 // activation of innate immune response // inferred from electronic annotation /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0009615 // response to virus // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0032606 // type I interferon production // traceable author statement /// 0032727 // positive regulation of interferon-alpha production // inferred from direct assay /// 0032728 // positive regulation of interferon-beta production // inferred from direct assay /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0045359 // positive regulation of interferon-beta biosynthetic process // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004672 // protein kinase activity // non-traceable author statement /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0051219 // phosphoprotein binding // inferred from physical interaction","chr12:64845659-64895894 (+) // 98.91 // q14.2"]
["11763173_s_at",-0.006023407,-0.019739628,-0.11631966,0.13999748,0.006023407,0.05292368,0.35570246,0.095847756,-1.0819814,-0.11367572,1.0819814,"down","PGM3",5238,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006041 // glucosamine metabolic process // non-traceable author statement /// 0006048 // UDP-N-acetylglucosamine biosynthetic process // not recorded /// 0006048 // UDP-N-acetylglucosamine biosynthetic process // inferred from electronic annotation /// 0006048 // UDP-N-acetylglucosamine biosynthetic process // traceable author statement /// 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0019255 // glucose 1-phosphate metabolic process // inferred from electronic annotation /// 0030097 // hemopoiesis // not recorded /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005829 // cytosol // not recorded /// 0005829 // cytosol // traceable author statement","0000287 // magnesium ion binding // inferred from electronic annotation /// 0004610 // phosphoacetylglucosamine mutase activity // inferred from direct assay /// 0004610 // phosphoacetylglucosamine mutase activity // inferred from electronic annotation /// 0004614 // phosphoglucomutase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0016868 // intramolecular transferase activity, phosphotransferases // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:83875908-83903633 (-) // 75.49 // q14.1"]
["11733519_a_at",0.056735992,-0.11387062,0.043845177,-0.0677557,-0.043845177,0.23425388,0.8840744,0.70493275,-1.0319078,-0.04531407,1.0319078,"down","KCNK10",54207,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0071805 // potassium ion transmembrane transport // traceable author statement /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005267 // potassium channel activity // inferred from electronic annotation /// 0005267 // potassium channel activity // traceable author statement","chr14:88646453-88789595 (-) // 92.82 // q31.3"]
["11725803_a_at",0.19259739,0.08753729,0.068725586,-0.06872606,-0.2361741,-0.26246262,0.13205785,0.013169692,1.2357678,0.30540773,1.2357678,"up","C21orf91",54149,"","","","chr21:19161290-19191703 (-) // 97.48 // q21.1"]
["11732987_x_at",-0.07608652,0.21751451,0.024619102,-0.024618864,-0.06138563,0.048829794,0.77345306,0.5025135,1.048074,0.06774059,1.048074,"up","IFNA6",3443,"0006952 // defense response // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0009615 // response to virus // non-traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement /// 0060338 // regulation of type I interferon-mediated signaling pathway // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0005126 // cytokine receptor binding // non-traceable author statement /// 0005126 // cytokine receptor binding // inferred from electronic annotation","chr9:21350316-21350886 (-) // 100.0 // p21.3"]
["11733294_at",-0.52367496,-0.06521559,0.0017142296,-0.0017142296,0.03575945,0.15887928,0.518102,0.20530033,-1.1975065,-0.26003355,1.1975065,"down","PHF20L1",51105,"","","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:133787576-133825437 (+) // 96.07 // q24.22"]
["11744612_a_at",0.020905495,0.08325958,0.05959797,-0.14805984,-0.052253723,-0.020905495,0.2252881,0.03875895,1.0930257,0.1283273,1.0930257,"up","NUDCD1",84955,"","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","","chr8:110254909-110346347 (-) // 97.62 // q23.1"]
["11738934_at",0.0033774376,-0.06505585,-0.0033774376,0.3700676,-0.078279495,0.13597822,0.5987167,0.27902538,-1.1206021,-0.16427414,1.1206021,"down","GSX1",219409,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0021527 // spinal cord association neuron differentiation // inferred from electronic annotation /// 0021854 // hypothalamus development // inferred from electronic annotation /// 0021984 // adenohypophysis development // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048663 // neuron fate commitment // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr13:28366779-28368089 (+) // 92.68 // q12.2"]
["11727118_a_at",-0.29528522,0.06716967,0.053884983,-0.16863394,-0.053884983,0.122300625,0.95531183,0.87379265,-1.0172476,-0.024670817,1.0172476,"down","CFP",5199,"0006955 // immune response // traceable author statement /// 0006956 // complement activation // traceable author statement /// 0006957 // complement activation, alternative pathway // traceable author statement /// 0006957 // complement activation, alternative pathway // inferred from electronic annotation /// 0030449 // regulation of complement activation // traceable author statement /// 0042742 // defense response to bacterium // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0031012 // extracellular matrix // inferred from direct assay","","chrX:47483611-47489704 (-) // 89.24 // p11.23"]
["11723196_at",0.031080246,-0.08830452,0.0023384094,0.09624672,-0.0023384094,-0.0101566315,0.70587766,0.40478113,-1.0325506,-0.046212446,1.0325506,"down","C2orf15 /// MRPL30","150590 /// 51263","0006412 // translation // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from electronic annotation","chr2:99797541-99814351 (+) // 66.41 // q11.2"]
["11739399_s_at",0.015183449,-0.015183449,-0.048737526,-0.022542,0.045916557,0.083833694,0.54081637,0.22424254,-1.0366881,-0.051981892,1.0366881,"down","C20orf194 /// UBE2F","140739 /// 25943","0045116 // protein neddylation // inferred from direct assay /// 0045116 // protein neddylation // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0019788 // NEDD8 ligase activity // inferred from direct assay","chr2:238875586-238950957 (+) // 98.4 // q37.3"]
["11747089_a_at",0.033154488,0.09407568,-0.033154488,-0.2253437,0.06167555,-0.039323807,0.65680134,0.34114042,1.0710475,0.09902252,1.0710475,"up","PTPRS",5802,"0006470 // protein dephosphorylation // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0021510 // spinal cord development // inferred from electronic annotation /// 0021549 // cerebellum development // inferred from electronic annotation /// 0021766 // hippocampus development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0022038 // corpus callosum development // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005001 // transmembrane receptor protein tyrosine phosphatase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr19:5273074-5286399 (-) // 82.68 // p13.3"]
["11719967_at",0.16416597,0.13171816,-0.05564356,-0.060963154,-0.08139944,0.05564356,0.5676102,0.24827471,1.0784703,0.10898651,1.0784703,"up","HTT",3064,"0000050 // urea cycle // inferred from electronic annotation /// 0000052 // citrulline metabolic process // inferred from electronic annotation /// 0000132 // establishment of mitotic spindle orientation // inferred from mutant phenotype /// 0006606 // protein import into nucleus // inferred from electronic annotation /// 0006839 // mitochondrial transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from electronic annotation /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // inferred from mutant phenotype /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0007005 // mitochondrion organization // inferred from electronic annotation /// 0007029 // endoplasmic reticulum organization // inferred from electronic annotation /// 0007030 // Golgi organization // inferred from mutant phenotype /// 0007212 // dopamine receptor signaling pathway // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007369 // gastrulation // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007569 // cell aging // inferred from electronic annotation /// 0007610 // behavior // inferred from electronic annotation /// 0007611 // learning or memory // inferred from electronic annotation /// 0007612 // learning // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0008088 // axon cargo transport // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008306 // associative learning // inferred from electronic annotation /// 0008340 // determination of adult lifespan // inferred from electronic annotation /// 0008542 // visual learning // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0016197 // endosomal transport // inferred from electronic annotation /// 0019244 // lactate biosynthetic process from pyruvate // inferred from electronic annotation /// 0019805 // quinolinate biosynthetic process // inferred from electronic annotation /// 0021756 // striatum development // inferred from electronic annotation /// 0021988 // olfactory lobe development // inferred from electronic annotation /// 0021990 // neural plate formation // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from electronic annotation /// 0030072 // peptide hormone secretion // inferred from electronic annotation /// 0030073 // insulin secretion // inferred from electronic annotation /// 0034047 // regulation of protein phosphatase type 2A activity // inferred from mutant phenotype /// 0035176 // social behavior // inferred from electronic annotation /// 0042445 // hormone metabolic process // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0046902 // regulation of mitochondrial membrane permeability // inferred from electronic annotation /// 0047496 // vesicle transport along microtubule // inferred from mutant phenotype /// 0047496 // vesicle transport along microtubule // inferred from electronic annotation /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0048341 // paraxial mesoderm formation // inferred from electronic annotation /// 0048513 // organ development // not recorded /// 0048666 // neuron development // inferred from electronic annotation /// 0051402 // neuron apoptotic process // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from electronic annotation /// 0051881 // regulation of mitochondrial membrane potential // inferred from electronic annotation /// 0051938 // L-glutamate import // inferred from electronic annotation /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0005776 // autophagic vacuole // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0016234 // inclusion body // inferred from electronic annotation /// 0030424 // axon // inferred from direct assay /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from direct assay /// 0030659 // cytoplasmic vesicle membrane // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay","0002039 // p53 binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // not recorded /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0034452 // dynactin binding // inferred from physical interaction /// 0045505 // dynein intermediate chain binding // inferred from direct assay /// 0048487 // beta-tubulin binding // inferred from direct assay /// 0050809 // diazepam binding // inferred from electronic annotation","chr4:3076236-3245684 (+) // 97.61 // p16.3"]
["11742227_at",0.048886776,-0.048886776,0.19902563,-0.22807693,-0.22242212,0.10202026,0.55377436,0.23532811,1.1348499,0.1825015,1.1348499,"up","CLDN22",53842,"0016338 // calcium-independent cell-cell adhesion // inferred from sequence or structural similarity /// 0034329 // cell junction assembly // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement /// 0070830 // tight junction assembly // traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from sequence or structural similarity","chr4:184239219-184241927 (-) // 98.86 // q35.1"]
["11744134_at",-0.0059604645,0.05956745,0.03908825,-0.049110413,0.0059604645,-0.05009365,0.3284152,0.081713185,1.0438972,0.06197958,1.0438972,"up","ZSWIM6",57688,"","","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:60628099-60841999 (+) // 91.81 // q12.1"]
["11716818_a_at",-0.060531855,-0.00015854836,-0.05806017,0.00015830994,0.17839909,0.09745574,0.31566247,0.07557494,-1.0954988,-0.13158791,1.0954988,"down","VSIG4",11326,"0006957 // complement activation, alternative pathway // inferred from electronic annotation /// 0032703 // negative regulation of interleukin-2 production // inferred from electronic annotation /// 0042130 // negative regulation of T cell proliferation // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chrX:65241579-65259967 (-) // 98.46 // q12"]
["11741873_a_at",0.019194603,-0.050973892,-0.02607441,0.101480484,0.046795845,-0.019194603,0.5097685,0.19859247,-1.0441376,-0.062311843,1.0441376,"down","CSNK1E",1454,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0034613 // cellular protein localization // inferred from electronic annotation /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from sequence or structural similarity /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr22:38686697-38714089 (-) // 92.37 // q13.1"]
["11763684_x_at",-0.27203846,-0.058102608,0.14494944,-0.5416727,0.058102608,0.067774296,0.9094268,0.759773,1.0547259,0.0768681,1.0547259,"up","IGK@ /// IGKC","3514 /// 50802","0006955 // immune response // non-traceable author statement /// 0006956 // complement activation // traceable author statement /// 0006958 // complement activation, classical pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0050776 // regulation of immune response // traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005886 // plasma membrane // traceable author statement","0003823 // antigen binding // non-traceable author statement /// 0003823 // antigen binding // inferred from electronic annotation","chr2:89246821-89246950 (-) // 99.22 // p11.2"]
["11719431_a_at",0.17694616,0.051669598,-0.07078552,0.019828796,-0.13083124,-0.019828796,0.63637644,0.31860694,1.0689694,0.096220516,1.0689694,"up","TMC6",11322,"","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr17:76106543-76124866 (-) // 90.7 // q25.3"]
["11736477_a_at",-0.06163597,-0.07460499,-0.12945175,0.27543068,0.20702839,0.06163597,0.14225398,0.015263869,-1.2057487,-0.26992923,1.2057487,"down","ELL2",22936,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006368 // transcription elongation from RNA polymerase II promoter // inferred from electronic annotation /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006414 // translational elongation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0008023 // transcription elongation factor complex // inferred from electronic annotation /// 0008023 // transcription elongation factor complex // traceable author statement","0003746 // translation elongation factor activity // inferred from electronic annotation","chr5:95220804-95297982 (-) // 94.81 // q15"]
["11723114_s_at",-0.006333828,-0.01564169,0.18727207,0.06271362,0.006333828,-0.15581894,0.7151681,0.41776416,1.0599694,0.08402265,1.0599694,"up","CENPC1",1060,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // inferred from mutant phenotype /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from mutant phenotype /// 0007067 // mitosis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051382 // kinetochore assembly // inferred from mutant phenotype","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000776 // kinetochore // inferred from electronic annotation /// 0000776 // kinetochore // traceable author statement /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0000780 // condensed nuclear chromosome, centromeric region // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005721 // centromeric heterochromatin // inferred from direct assay /// 0005829 // cytosol // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement","chr4:68337520-68411324 (-) // 90.09 // q13.2"]
["11744031_at",-0.2715311,-0.31526184,-0.117792845,0.64666224,0.50475407,0.11779308,0.15259284,0.017645719,-1.577819,-0.6579317,1.577819,"down","MMP7",4316,"0002779 // antibacterial peptide secretion // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030574 // collagen catabolic process // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation /// 0050829 // defense response to Gram-negative bacterium // inferred from electronic annotation /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0031012 // extracellular matrix // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:102391238-102401483 (-) // 83.18 // q22.2"]
["11738800_a_at",0.086278915,-0.078681946,0.064986706,0.08995676,-0.064986706,-0.21130991,0.73247534,0.44196245,1.0616497,0.08630779,1.0616497,"up","BRWD3",254065,"0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0008360 // regulation of cell shape // inferred from mutant phenotype","","","chrX:79931682-80065233 (-) // 95.44 // q21.1"]
["11726628_a_at",-0.13748646,-0.046878338,0.07820225,-0.10114193,0.046878338,0.13643265,0.79440063,0.53798676,-1.0444745,-0.06277724,1.0444745,"down","SEMA4A",64218,"0001525 // angiogenesis // inferred from electronic annotation /// 0002292 // T cell differentiation involved in immune response // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0010594 // regulation of endothelial cell migration // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045063 // T-helper 1 cell differentiation // inferred from electronic annotation /// 0071526 // semaphorin-plexin signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr1:156119473-156147613 (+) // 97.22 // q22"]
["11736073_a_at",0.35162735,0.22303009,0.19654942,-0.19654942,-0.37682915,-0.3464613,0.049534615,0.0015523754,1.4780369,0.56368226,1.4780369,"up","ALDH1B1",219,"0005975 // carbohydrate metabolic process // non-traceable author statement /// 0006068 // ethanol catabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0004029 // aldehyde dehydrogenase (NAD) activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016620 // oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor // inferred from electronic annotation","chr9:38392646-38398655 (+) // 69.23 // p13.2"]
["11750741_a_at",0.073693275,0.17510748,0.07051182,-0.07051134,-0.13985729,-0.17281818,0.09717499,0.006868488,1.176227,0.23416647,1.176227,"up","TAB2",23118,"0000187 // activation of MAPK activity // traceable author statement /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0007254 // JNK cascade // traceable author statement /// 0007507 // heart development // inferred from mutant phenotype /// 0008063 // Toll signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0045087 // innate immune response // traceable author statement /// 0045860 // positive regulation of protein kinase activity // inferred from direct assay /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070530 // K63-linked polyubiquitin binding // inferred from direct assay","chr6:149539776-149731075 (+) // 98.5 // q25.1"]
["11761977_at",0.0893898,0.07943964,-0.13879061,-0.00047063828,-0.004237175,0.00047063828,0.9597164,0.88549596,1.0079509,0.011425366,1.0079509,"up","CCDC171",203238,"","","","chr9:15552871-15660144 (+) // 74.54 // p22.3"]
["11734735_a_at",-0.48417377,-0.09335232,-0.059720993,0.059720993,0.2998829,0.118709564,0.31100115,0.07343896,-1.2940142,-0.37185347,1.2940142,"down","FAR1",84188,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0008611 // ether lipid biosynthetic process // traceable author statement /// 0010025 // wax biosynthetic process // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005777 // peroxisome // inferred from electronic annotation /// 0005778 // peroxisomal membrane // inferred from direct assay /// 0005778 // peroxisomal membrane // inferred from electronic annotation /// 0005782 // peroxisomal matrix // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016620 // oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0050062 // long-chain-fatty-acyl-CoA reductase activity // inferred from electronic annotation","chr11:13689891-13753889 (+) // 97.59 // p15.2"]
["11733221_a_at",-0.256876,-0.016498566,0.016498566,0.21930695,0.17389011,-0.056299686,0.48304385,0.177929,-1.1470469,-0.1979244,1.1470469,"down","DLL3",10683,"0001501 // skeletal system development // inferred from mutant phenotype /// 0001501 // skeletal system development // inferred from electronic annotation /// 0001756 // somitogenesis // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007386 // compartment pattern specification // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0009888 // tissue development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045746 // negative regulation of Notch signaling pathway // inferred from electronic annotation /// 0048339 // paraxial mesoderm development // inferred from electronic annotation /// 0048712 // negative regulation of astrocyte differentiation // inferred from electronic annotation /// 0050768 // negative regulation of neurogenesis // inferred from electronic annotation /// 0050769 // positive regulation of neurogenesis // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005112 // Notch binding // non-traceable author statement /// 0005112 // Notch binding // inferred from electronic annotation","chr19:39989544-39999109 (+) // 98.51 // q13.2"]
["11751682_a_at",-0.29687405,0.103061676,0.14407825,-0.15123272,-0.103061676,0.13884735,0.9649277,0.9018866,1.0152987,0.021904264,1.0152987,"up","RNASEH2C",84153,"0006401 // RNA catabolic process // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0032299 // ribonuclease H2 complex // inferred from direct assay /// 0032299 // ribonuclease H2 complex // inferred from electronic annotation","","chr11:65486718-65488269 (-) // 99.9 // q13.1"]
["11726236_at",-0.21820116,-0.07901144,0.036824703,-0.008325577,0.01696825,0.008325577,0.6002751,0.2801815,-1.0661807,-0.09245198,1.0661807,"down","ACY3",91703,"0008152 // metabolic process // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation","0004046 // aminoacylase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation /// 0016811 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:67410025-67418419 (-) // 94.84 // q13.2"]
["11762876_x_at",-0.033495426,0.032770157,0.048585415,-0.32934332,-0.032770157,0.25997877,0.9194042,0.78570485,1.0352637,0.049998235,1.0352637,"up","CAPRIN2",65981,"0017148 // negative regulation of translation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0032092 // positive regulation of protein binding // inferred from direct assay /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0040008 // regulation of growth // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0050775 // positive regulation of dendrite morphogenesis // inferred from sequence or structural similarity /// 0061003 // positive regulation of dendritic spine morphogenesis // inferred from sequence or structural similarity /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0043235 // receptor complex // inferred from direct assay","0003723 // RNA binding // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction","chr12:30881312-30884382 (-) // 81.15 // p11.21"]
["11760155_a_at",0.08036423,0.10609245,0.030394554,-0.361516,-0.044693947,-0.030394554,0.397701,0.11958808,1.1629738,0.21781854,1.1629738,"up","FUBP1",8880,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation","chr1:78412168-78444753 (-) // 95.98 // p31.1"]
["11718703_a_at",0.24189615,0.012057781,-0.1270771,0.12128925,-0.018989563,-0.012057304,0.97246444,0.9218085,1.0085003,0.012211567,1.0085003,"up","INO80E",283899,"0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0031011 // Ino80 complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr16:30006913-30017111 (+) // 95.02 // p11.2"]
["11721498_a_at",0.6558337,0.08231735,-0.08231783,0.18745184,-0.28580523,-0.50484896,0.5569768,0.23821537,1.3376294,0.4196785,1.3376294,"up","TPST2",8459,"0006478 // peptidyl-tyrosine sulfation // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008476 // protein-tyrosine sulfotransferase activity // inferred from electronic annotation /// 0008476 // protein-tyrosine sulfotransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation","chr22:26920696-26961370 (-) // 70.34 // q12.1"]
["11732329_a_at",0.5380373,0.070013046,-0.038168907,0.038169384,-0.42939472,-0.38582993,0.40565294,0.124227196,1.3650738,0.44897893,1.3650738,"up","MAP7D1",55700,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","","chr1:36621801-36646448 (+) // 93.77 // p34.3"]
["11741461_a_at",-0.24708891,-0.20553589,0.1018734,-0.074309826,0.074309826,0.12194586,0.5960333,0.2757251,-1.1154035,-0.15756574,1.1154035,"down","PCDHGB2",56103,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr5:140739639-140742196 (+) // 99.96 // q31.3"]
["11744077_at",0.090447426,0.08912277,0.062119484,-0.14880943,-0.067046165,-0.062119484,0.07760965,0.004247388,1.1275736,0.17322162,1.1275736,"up","ARPC1B",10095,"0006928 // cellular component movement // traceable author statement /// 0030833 // regulation of actin filament polymerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005885 // Arp2/3 protein complex // traceable author statement /// 0015629 // actin cytoskeleton // traceable author statement","0003779 // actin binding // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement","chr7:98972349-98992421 (+) // 71.18 // q22.1"]
["11717561_s_at",0.17591476,-0.18323803,-0.120495796,0.19441223,0.056682587,-0.056682587,0.7464153,0.46280923,-1.0772928,-0.107410416,1.0772928,"down","DTX3L",151636,"0006974 // response to DNA damage stimulus // inferred from mutant phenotype /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0010390 // histone monoubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0042393 // histone binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:122283084-122294050 (+) // 70.69 // q21.1"]
["11743116_s_at",0.05703354,0.14461517,0.16065788,-0.22511005,-0.12251949,-0.05703354,0.1266311,0.012008873,1.193879,0.25565663,1.193879,"up","KPNB1",3837,"0000060 // protein import into nucleus, translocation // traceable author statement /// 0006309 // apoptotic DNA fragmentation // traceable author statement /// 0006606 // protein import into nucleus // inferred from direct assay /// 0006606 // protein import into nucleus // inferred from electronic annotation /// 0006607 // NLS-bearing substrate import into nucleus // traceable author statement /// 0006610 // ribosomal protein import into nucleus // inferred from direct assay /// 0006610 // ribosomal protein import into nucleus // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral reproduction // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0046796 // viral genome transport in host cell // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005643 // nuclear pore // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0031965 // nuclear membrane // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008139 // nuclear localization sequence binding // traceable author statement /// 0008270 // zinc ion binding // traceable author statement /// 0008565 // protein transporter activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction","chr17:45726830-45762180 (+) // 88.4 // q21.32"]
["11760895_a_at",0.16624975,-0.04819441,-0.29917264,0.05286169,0.04819441,-0.06742334,0.8499412,0.63636714,-1.0508693,-0.07158331,1.0508693,"down","SLC29A1",2030,"0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0015858 // nucleoside transport // inferred from direct assay /// 0015858 // nucleoside transport // inferred from electronic annotation /// 0015858 // nucleoside transport // traceable author statement /// 0015862 // uridine transport // inferred from electronic annotation /// 0030431 // sleep // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from electronic annotation","0005337 // nucleoside transmembrane transporter activity // inferred from electronic annotation /// 0005337 // nucleoside transmembrane transporter activity // traceable author statement","chr6:44194364-44201181 (+) // 85.54 // p21.1"]
["11728590_a_at",-0.075876236,-0.018475533,0.044705868,0.018475533,-0.087605,0.051012993,0.94858176,0.85633236,-1.0073115,-0.010509837,1.0073115,"down","TMEM180",79847,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr10:104221169-104236802 (+) // 81.95 // q24.32"]
["11749453_x_at",-0.30872726,-0.0057349205,-0.0075497627,0.008921623,0.0057349205,0.0992198,0.5582766,0.23958594,-1.1059576,-0.14529611,1.1059576,"down","ZFYVE27",118813,"0008219 // cell death // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from direct assay /// 0048011 // nerve growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0072659 // protein localization in plasma membrane // inferred from sequence or structural similarity","0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0032584 // growth cone membrane // inferred from sequence or structural similarity /// 0032584 // growth cone membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from sequence or structural similarity /// 0055038 // recycling endosome membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:99496877-99519260 (+) // 98.13 // q24.2"]
["11736124_a_at",-0.27492285,0.07723093,-0.057637215,-0.008377552,0.06972599,0.008378029,0.6725793,0.36160925,-1.077996,-0.10835184,1.077996,"down","CPLX2",10814,"0006810 // transport // inferred from electronic annotation /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0006904 // vesicle docking involved in exocytosis // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0016079 // synaptic vesicle exocytosis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031915 // positive regulation of synaptic plasticity // inferred from sequence or structural similarity /// 0031915 // positive regulation of synaptic plasticity // inferred from electronic annotation /// 0043303 // mast cell degranulation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031201 // SNARE complex // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0000149 // SNARE binding // inferred from electronic annotation /// 0017075 // syntaxin-1 binding // inferred from electronic annotation /// 0019905 // syntaxin binding // inferred from electronic annotation","chr5:175223010-175311024 (+) // 93.99 // q35.2"]
["11726291_a_at",0.3929863,-0.043030262,-0.19637442,0.03165388,0.043154716,-0.03165388,0.944832,0.84632474,1.0258423,0.03680898,1.0258423,"up","LRRC17",10234,"0001503 // ossification // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from sequence or structural similarity /// 0033687 // osteoblast proliferation // inferred from sequence or structural similarity /// 0045671 // negative regulation of osteoclast differentiation // inferred from sequence or structural similarity /// 0045671 // negative regulation of osteoclast differentiation // inferred from electronic annotation /// 0048539 // bone marrow development // inferred from sequence or structural similarity /// 0048539 // bone marrow development // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from sequence or structural similarity /// 0005615 // extracellular space // inferred from electronic annotation","","chr7:102553343-102585540 (+) // 97.74 // q22.1"]
["11758239_s_at",-0.03078413,-0.058734894,0.03078413,0.33310032,0.09005737,-0.08744812,0.66531223,0.35127732,-1.095418,-0.13148145,1.095418,"down","C9orf72",203228,"0008219 // cell death // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","","chr9:27547784-27548451 (-) // 97.01 // p21.2"]
["11761765_at",-0.052395344,-0.13412213,-0.0016884804,0.10244107,0.0016884804,0.04082632,0.33268347,0.08369789,-1.080017,-0.11105398,1.080017,"down","HOXA2",3199,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001709 // cell fate determination // inferred from electronic annotation /// 0002076 // osteoblast development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007379 // segment specification // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0009953 // dorsal/ventral pattern formation // inferred from electronic annotation /// 0021568 // rhombomere 2 development // inferred from electronic annotation /// 0021569 // rhombomere 3 development // inferred from electronic annotation /// 0021658 // rhombomere 3 morphogenesis // inferred from electronic annotation /// 0035284 // brain segmentation // inferred from electronic annotation /// 0042474 // middle ear morphogenesis // inferred from electronic annotation /// 0045165 // cell fate commitment // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048703 // embryonic viscerocranium morphogenesis // inferred from electronic annotation /// 0048704 // embryonic skeletal system morphogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr7:27141236-27142302 (-) // 92.69 // p15.2"]
["11717741_x_at",0.0092897415,-0.10186291,-0.12157345,0.02805233,0.017373085,-0.0092897415,0.39739507,0.119354784,-1.0595322,-0.083427384,1.0595322,"down","FUCA2",2519,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006004 // fucose metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004560 // alpha-L-fucosidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0043169 // cation binding // inferred from electronic annotation","chr6:143816063-143833027 (-) // 74.62 // q24.2"]
["11730896_a_at",0.39544535,-0.036127567,0.02918768,0.5284915,-0.25248766,-0.029187202,0.9535128,0.86880755,1.0332788,0.047229607,1.0332788,"up","MAPKAPK2",9261,"0000165 // MAPK cascade // traceable author statement /// 0000187 // activation of MAPK activity // traceable author statement /// 0002224 // toll-like receptor signaling pathway // inferred from sequence or structural similarity /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002224 // toll-like receptor signaling pathway // inferred from electronic annotation /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006692 // prostanoid metabolic process // traceable author statement /// 0006950 // response to stress // inferred from direct assay /// 0006954 // inflammatory response // inferred from sequence or structural similarity /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from mutant phenotype /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0019370 // leukotriene biosynthetic process // traceable author statement /// 0031572 // G2/M transition DNA damage checkpoint // inferred from mutant phenotype /// 0032496 // response to lipopolysaccharide // inferred from sequence or structural similarity /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032675 // regulation of interleukin-6 production // inferred from sequence or structural similarity /// 0032675 // regulation of interleukin-6 production // inferred from electronic annotation /// 0032680 // regulation of tumor necrosis factor production // inferred from direct assay /// 0032680 // regulation of tumor necrosis factor production // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0044351 // macropinocytosis // inferred from sequence or structural similarity /// 0044351 // macropinocytosis // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from mutant phenotype /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048255 // mRNA stabilization // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0070935 // 3'-UTR-mediated mRNA stabilization // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr1:206858288-206907626 (+) // 87.6 // q32.1"]
["11745315_a_at",0.3381405,0.11215401,0.16351318,-0.2162199,-0.11215401,-0.2521038,0.10302479,0.0077005266,1.3177668,0.39809507,1.3177668,"up","CTNNAL1",8727,"0007155 // cell adhesion // inferred from electronic annotation /// 0007266 // Rho protein signal transduction // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0045296 // cadherin binding // inferred from electronic annotation","chr9:111704894-111775778 (-) // 99.75 // q31.3"]
["11719825_a_at",0.033951283,-0.0071907043,0.0071902275,-0.109726906,0.14401531,-0.07939148,0.90980387,0.7609828,1.0184332,0.026351374,1.0184332,"up","ZAK",51776,"0000075 // cell cycle checkpoint // inferred from direct assay /// 0000077 // DNA damage checkpoint // inferred from mutant phenotype /// 0000165 // MAPK cascade // inferred from electronic annotation /// 0000186 // activation of MAPKK activity // inferred from direct assay /// 0000186 // activation of MAPKK activity // traceable author statement /// 0000186 // activation of MAPKK activity // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006950 // response to stress // non-traceable author statement /// 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from mutant phenotype /// 0007243 // intracellular protein kinase cascade // inferred from direct assay /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // inferred from direct assay /// 0008219 // cell death // non-traceable author statement /// 0008283 // cell proliferation // non-traceable author statement /// 0009314 // response to radiation // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030154 // cell differentiation // non-traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004709 // MAP kinase kinase kinase activity // inferred from direct assay /// 0004709 // MAP kinase kinase kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:173940555-174091874 (+) // 80.78 // q31.1"]
["11741083_x_at",0.10110378,-0.040409088,-0.047323227,0.16110706,0.006593704,-0.006594658,0.79241496,0.5335676,-1.0347232,-0.04924483,1.0347232,"down","EIF4G2",1982,"0006412 // translation // inferred from direct assay /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006446 // regulation of translational initiation // inferred from direct assay /// 0007050 // cell cycle arrest // traceable author statement /// 0008219 // cell death // traceable author statement /// 0016070 // RNA metabolic process // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016281 // eukaryotic translation initiation factor 4F complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008135 // translation factor activity, nucleic acid binding // inferred from direct assay /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement","chr11:10818592-10830582 (-) // 98.37 // p15.3"]
["11724046_a_at",0.15210056,0.07966328,0.08816719,-0.07966328,-0.17956257,-0.20017338,0.07615812,0.004008261,1.1972934,0.25977674,1.1972934,"up","BID",637,"0001836 // release of cytochrome c from mitochondria // inferred from direct assay /// 0001836 // release of cytochrome c from mitochondria // inferred from electronic annotation /// 0006626 // protein targeting to mitochondrion // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008625 // induction of apoptosis via death domain receptors // traceable author statement /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0008637 // apoptotic mitochondrial changes // traceable author statement /// 0008637 // apoptotic mitochondrial changes // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032461 // positive regulation of protein oligomerization // inferred from direct assay /// 0032464 // positive regulation of protein homooligomerization // inferred from direct assay /// 0032464 // positive regulation of protein homooligomerization // inferred from electronic annotation /// 0034349 // glial cell apoptotic process // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0046902 // regulation of mitochondrial membrane permeability // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0051402 // neuron apoptotic process // traceable author statement /// 0090150 // establishment of protein localization in membrane // inferred from direct assay /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from genetic interaction /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from mutant phenotype /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from electronic annotation /// 2000045 // regulation of G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 2001238 // positive regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation /// 0032592 // integral to mitochondrial membrane // inferred from electronic annotation","0005123 // death receptor binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from electronic annotation","chr22:18216907-18256813 (-) // 99.14 // q11.21"]
["11732377_a_at",-0.33091545,0.268116,0.2772894,-0.47374725,-0.08986282,0.08986282,0.7230176,0.42904514,1.1723573,0.22941235,1.1723573,"up","BROX",148362,"","0016020 // membrane // inferred from electronic annotation","","chr1:222885894-222906109 (+) // 98.77 // q41"]
["11749480_a_at",0.20088005,-0.011758804,-0.15081501,0.2371769,0.011758804,-0.07050896,0.9060337,0.75124276,-1.0329045,-0.046706878,1.0329045,"down","LONP1",9361,"0000002 // mitochondrial genome maintenance // non-traceable author statement /// 0001666 // response to hypoxia // inferred from expression pattern /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006515 // misfolded or incompletely synthesized protein catabolic process // not recorded /// 0007005 // mitochondrion organization // inferred from mutant phenotype /// 0032042 // mitochondrial DNA metabolic process // non-traceable author statement /// 0034599 // cellular response to oxidative stress // inferred by curator /// 0034599 // cellular response to oxidative stress // inferred from direct assay /// 0051260 // protein homooligomerization // inferred from direct assay /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from direct assay /// 0070407 // oxidation-dependent protein catabolic process // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from mutant phenotype /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0042645 // mitochondrial nucleoid // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // not recorded /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0003727 // single-stranded RNA binding // inferred from direct assay /// 0004176 // ATP-dependent peptidase activity // inferred from direct assay /// 0004176 // ATP-dependent peptidase activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // not recorded /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0043531 // ADP binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0051880 // G-quadruplex DNA binding // inferred from direct assay /// 0070182 // DNA polymerase binding // inferred from physical interaction /// 0070361 // mitochondrial light strand promoter anti-sense binding // inferred from direct assay /// 0070361 // mitochondrial light strand promoter anti-sense binding // inferred from electronic annotation /// 0070362 // mitochondrial heavy strand promoter anti-sense binding // inferred from direct assay /// 0070363 // mitochondrial light strand promoter sense binding // inferred from direct assay /// 0070364 // mitochondrial heavy strand promoter sense binding // inferred from direct assay","chr19:5691845-5720157 (-) // 96.88 // p13.3"]
["11716550_at",-0.3600235,-0.24004889,-0.10975742,0.10975695,0.18185472,0.22023582,0.096661255,0.0067801303,-1.3261333,-0.40722573,1.3261333,"down","HES1",3280,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0003151 // outflow tract morphogenesis // inferred from sequence or structural similarity /// 0003151 // outflow tract morphogenesis // inferred from electronic annotation /// 0003266 // regulation of secondary heart field cardioblast proliferation // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from sequence or structural similarity /// 0003281 // ventricular septum development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006461 // protein complex assembly // inferred from sequence or structural similarity /// 0006461 // protein complex assembly // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from direct assay /// 0007219 // Notch signaling pathway // inferred from mutant phenotype /// 0007219 // Notch signaling pathway // traceable author statement /// 0007224 // smoothened signaling pathway // inferred from electronic annotation /// 0007262 // STAT protein import into nucleus // inferred from sequence or structural similarity /// 0007262 // STAT protein import into nucleus // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from sequence or structural similarity /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0021537 // telencephalon development // inferred from electronic annotation /// 0021555 // midbrain-hindbrain boundary morphogenesis // inferred from electronic annotation /// 0021557 // oculomotor nerve development // inferred from electronic annotation /// 0021558 // trochlear nerve development // inferred from electronic annotation /// 0021575 // hindbrain morphogenesis // inferred from electronic annotation /// 0021861 // forebrain radial glial cell differentiation // inferred from sequence or structural similarity /// 0021915 // neural tube development // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0021984 // adenohypophysis development // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030513 // positive regulation of BMP signaling pathway // inferred from electronic annotation /// 0030901 // midbrain development // inferred from electronic annotation /// 0031016 // pancreas development // inferred from electronic annotation /// 0031018 // endocrine pancreas development // traceable author statement /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0042102 // positive regulation of T cell proliferation // inferred from electronic annotation /// 0042491 // auditory receptor cell differentiation // inferred from electronic annotation /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from sequence or structural similarity /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from electronic annotation /// 0042668 // auditory receptor cell fate determination // inferred from electronic annotation /// 0043388 // positive regulation of DNA binding // inferred from sequence or structural similarity /// 0043388 // positive regulation of DNA binding // inferred from electronic annotation /// 0045165 // cell fate commitment // inferred from electronic annotation /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045598 // regulation of fat cell differentiation // inferred from electronic annotation /// 0045608 // negative regulation of auditory receptor cell differentiation // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045747 // positive regulation of Notch signaling pathway // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046331 // lateral inhibition // inferred from electronic annotation /// 0046427 // positive regulation of JAK-STAT cascade // inferred from sequence or structural similarity /// 0046427 // positive regulation of JAK-STAT cascade // inferred from electronic annotation /// 0048469 // cell maturation // inferred from electronic annotation /// 0048505 // regulation of timing of cell differentiation // inferred from electronic annotation /// 0048538 // thymus development // inferred from sequence or structural similarity /// 0048538 // thymus development // inferred from electronic annotation /// 0048667 // cell morphogenesis involved in neuron differentiation // inferred from electronic annotation /// 0048711 // positive regulation of astrocyte differentiation // inferred from sequence or structural similarity /// 0048711 // positive regulation of astrocyte differentiation // inferred from electronic annotation /// 0048715 // negative regulation of oligodendrocyte differentiation // inferred from sequence or structural similarity /// 0048715 // negative regulation of oligodendrocyte differentiation // inferred from electronic annotation /// 0048844 // artery morphogenesis // inferred from sequence or structural similarity /// 0048844 // artery morphogenesis // inferred from electronic annotation /// 0050767 // regulation of neurogenesis // inferred from electronic annotation /// 0060037 // pharyngeal system development // inferred from sequence or structural similarity /// 0060037 // pharyngeal system development // inferred from electronic annotation /// 0060164 // regulation of timing of neuron differentiation // inferred from electronic annotation /// 0060253 // negative regulation of glial cell proliferation // inferred from sequence or structural similarity /// 0060253 // negative regulation of glial cell proliferation // inferred from electronic annotation /// 0060675 // ureteric bud morphogenesis // inferred from electronic annotation /// 0061009 // common bile duct development // inferred from electronic annotation /// 0061106 // negative regulation of stomach neuroendocrine cell differentiation // inferred from electronic annotation /// 0061309 // cardiac neural crest cell development involved in outflow tract morphogenesis // inferred from electronic annotation /// 0072012 // glomerulus vasculature development // inferred from electronic annotation /// 0072049 // comma-shaped body morphogenesis // inferred from electronic annotation /// 0072050 // S-shaped body morphogenesis // inferred from electronic annotation /// 0072141 // renal interstitial cell development // inferred from electronic annotation /// 0072282 // metanephric nephron tubule morphogenesis // inferred from electronic annotation /// 0090102 // cochlea development // inferred from electronic annotation /// 0097084 // vascular smooth muscle cell development // inferred from sequence or structural similarity /// 0097084 // vascular smooth muscle cell development // inferred from electronic annotation /// 0097150 // neuronal stem cell maintenance // inferred from expression pattern /// 0097150 // neuronal stem cell maintenance // inferred from electronic annotation /// 2000227 // negative regulation of pancreatic A cell differentiation // inferred from electronic annotation /// 2000737 // negative regulation of stem cell differentiation // inferred from mutant phenotype /// 2000974 // negative regulation of pro-B cell differentiation // inferred from mutant phenotype /// 2000978 // negative regulation of forebrain neuron differentiation // inferred from sequence or structural similarity /// 2000981 // negative regulation of inner ear receptor cell differentiation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from sequence or structural similarity /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // non-traceable author statement /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from sequence or structural similarity /// 0071820 // N-box binding // inferred from sequence or structural similarity /// 0071820 // N-box binding // inferred from electronic annotation","chr3:193853930-193856396 (+) // 91.83 // q29"]
["11734790_at",0.07435703,-0.06591749,0.07626486,-0.020600796,-0.11887264,0.020600796,0.6556804,0.33983347,1.0481601,0.06785906,1.0481601,"up","SRR",63826,"0006520 // cellular amino acid metabolic process // inferred from electronic annotation /// 0006563 // L-serine metabolic process // inferred from direct assay /// 0006563 // L-serine metabolic process // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009069 // serine family amino acid metabolic process // inferred from sequence or structural similarity /// 0009069 // serine family amino acid metabolic process // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from expression pattern /// 0042493 // response to drug // inferred from electronic annotation /// 0042866 // pyruvate biosynthetic process // inferred from direct assay /// 0043278 // response to morphine // inferred from electronic annotation /// 0051289 // protein homotetramerization // inferred from electronic annotation /// 0051289 // protein homotetramerization // inferred from sequence or structural similarity /// 0070178 // D-serine metabolic process // inferred from direct assay /// 0070178 // D-serine metabolic process // inferred from electronic annotation /// 0070179 // D-serine biosynthetic process // inferred from direct assay /// 0070179 // D-serine biosynthetic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003941 // L-serine ammonia-lyase activity // inferred from direct assay /// 0003941 // L-serine ammonia-lyase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0008721 // D-serine ammonia-lyase activity // inferred from electronic annotation /// 0016594 // glycine binding // inferred from electronic annotation /// 0016594 // glycine binding // inferred from sequence or structural similarity /// 0016829 // lyase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0018114 // threonine racemase activity // inferred from electronic annotation /// 0018114 // threonine racemase activity // inferred from sequence or structural similarity /// 0030165 // PDZ domain binding // inferred from physical interaction /// 0030170 // pyridoxal phosphate binding // inferred from direct assay /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from sequence or structural similarity /// 0030378 // serine racemase activity // inferred from direct assay /// 0030378 // serine racemase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:2206959-2228553 (+) // 89.66 // p13.3"]
["11742967_a_at",-0.052017212,-0.13339758,-0.036660194,0.036660194,0.07439804,0.13858223,0.16435787,0.020463629,-1.1151506,-0.15723851,1.1151506,"down","MTERFD2",130916,"0006390 // transcription from mitochondrial promoter // inferred from electronic annotation /// 0006626 // protein targeting to mitochondrion // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0042255 // ribosome assembly // inferred from electronic annotation /// 0043010 // camera-type eye development // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005762 // mitochondrial large ribosomal subunit // inferred from direct assay","0019843 // rRNA binding // inferred from direct assay","chr2:242026510-242041714 (-) // 87.6 // q37.3"]
["11751461_a_at",0.040202856,-0.02920723,0.21942115,-0.12885332,0.02920723,-0.20496678,0.4491428,0.1528267,1.1315836,0.17834313,1.1315836,"up","C11orf65",160140,"","","","chr11:108179245-108338258 (-) // 100.0 // q22.3"]
["11730168_s_at",0.27511978,-0.027503967,-0.028345108,0.37688923,0.0084095,-0.0084095,0.9097844,0.7609276,-1.0370889,-0.052539527,1.0370889,"down",-0.028345108,"LITAF",9516,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from mutant phenotype /// 0050699 // WW domain binding // inferred from physical interaction"]
["11728135_at",-0.076206684,-0.10804987,-0.14578533,0.07620716,0.1271267,0.13287973,0.044074457,0.0011900761,-1.1664182,-0.22208513,1.1664182,"down","NIPAL4",348938,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015693 // magnesium ion transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr5:156887026-156901729 (+) // 98.76 // q33.3"]
["11759292_at",-0.03186369,-0.15379429,0.05067444,0.31352615,-0.16750383,0.03186369,0.7898709,0.52944267,-1.0749651,-0.104289845,1.0749651,"down","FAM63A",55793,"","","","chr1:150965685-150980225 (-) // 78.72 // q21.3"]
["11762134_at",-0.24864674,-0.097542286,0.040028095,-0.040028572,0.05098152,0.23448753,0.49660105,0.18827662,-1.1359247,-0.1838672,1.1359247,"down","ZNF76",7629,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006359 // regulation of transcription from RNA polymerase III promoter // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:35226685-35256092 (+) // 93.64 // p21.31"]
["11732848_a_at",0.07270527,-0.19909334,-0.03068018,-0.06963205,0.03068018,0.12075949,0.74178904,0.45532665,-1.0567435,-0.07962524,1.0567435,"down","PRELID2",153768,"","0005739 // mitochondrion // inferred from electronic annotation","","chr5:145137894-145214899 (-) // 70.42 // q32"]
["11763606_a_at",0.12405586,-0.17039204,-0.052745342,0.23088884,-0.027287483,0.027287006,0.70032066,0.39732334,-1.0792208,-0.10999002,1.0792208,"down","VAV1",7409,"0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006909 // phagocytosis // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0031295 // T cell costimulation // traceable author statement /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042110 // T cell activation // inferred from electronic annotation /// 0043087 // regulation of GTPase activity // inferred from electronic annotation /// 0045785 // positive regulation of cell adhesion // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement","0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0030676 // Rac guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:6826689-6854111 (+) // 98.27 // p13.3"]
["11720257_a_at",-0.28122663,-0.01804781,-0.013930798,0.16087866,0.049761295,0.013930798,0.43654042,0.14402874,-1.1323019,-0.1792587,1.1323019,"down","TRAPPC6B",122553,"0006810 // transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation","","chr14:39617014-39640038 (-) // 67.79 // q21.1"]
["11744010_x_at",-0.011731625,0.13099718,0.011731625,-0.076768875,-0.061231136,0.09101772,0.73152155,0.44087526,1.0419792,0.05932647,1.0419792,"up","TMEM175",84286,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr4:926174-952444 (+) // 97.13 // p16.3"]
["11729079_s_at",0.0032663345,0.13589644,-0.032130003,-0.17651653,0.151304,-0.003266096,0.8797988,0.6962336,1.031805,0.045170397,1.031805,"up","ESRRG",2104,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0048384 // retinoic acid receptor signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0003708 // retinoic acid receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005496 // steroid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050682 // AF-2 domain binding // inferred from sequence or structural similarity","chr1:216676587-217262976 (-) // 94.01 // q41"]
["11720254_a_at",0.28291988,-0.07605314,-0.058588028,0.12168646,-0.03480816,0.03480816,0.981657,0.94700533,1.006163,0.008864044,1.006163,"up","CNNM4",26504,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0031214 // biomineral tissue development // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:97426638-97477611 (+) // 94.71 // q11.2"]
["11721834_a_at",0.1241889,-0.0022711754,-0.046459198,0.13574886,0.0022711754,-0.14834833,0.9176251,0.782141,1.0200187,0.028595597,1.0200187,"up","GET4 /// SUN1","23353 /// 51608","0006810 // transport // inferred from electronic annotation /// 0006998 // nuclear envelope organization // inferred from genetic interaction /// 0006998 // nuclear envelope organization // inferred from electronic annotation /// 0071816 // tail-anchored membrane protein insertion into ER membrane // inferred from mutant phenotype /// 0090286 // cytoskeletal anchoring at nuclear membrane // inferred from direct assay /// 0090292 // nuclear matrix anchoring at nuclear membrane // inferred from direct assay","0002080 // acrosomal membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005639 // integral to nuclear inner membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay /// 0034993 // SUN-KASH complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0071818 // BAT3 complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0005521 // lamin binding // inferred from electronic annotation","chr7:916185-936071 (+) // 90.3 // p22.3"]
["11742731_at",-0.03236389,0.03143692,0.0077733994,-0.0077733994,-0.042053223,0.022108078,0.87352455,0.6836584,1.0080181,0.0115215955,1.0080181,"up","SURF6",6838,"0042254 // ribosome biogenesis // inferred from electronic annotation","0001652 // granular component // inferred from sequence or structural similarity /// 0001652 // granular component // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // traceable author statement /// 0005730 // nucleolus // inferred from electronic annotation /// 0044451 // nucleoplasm part // inferred from electronic annotation","0003677 // DNA binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from sequence or structural similarity /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement","chr9:136196985-136203222 (-) // 93.3 // q34.2"]
["11718393_s_at",-0.33709812,-0.017726898,0.023534775,-0.14239788,0.20618153,0.017726898,0.7144364,0.41680157,-1.1000738,-0.13760033,1.1000738,"down","PREPL",9581,"0006508 // proteolysis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr2:44545902-44588010 (-) // 83.12 // p21"]
["11722510_at",0.30597305,-0.13358498,-0.09289074,0.28429317,0.029539108,-0.029539108,0.8857288,0.70870435,-1.0484552,-0.06826527,1.0484552,"down","CRTC3",64784,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0032793 // positive regulation of CREB transcription factor activity // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051289 // protein homotetramerization // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0008140 // cAMP response element binding protein binding // inferred from electronic annotation","chr15:91073156-91188577 (+) // 95.0 // q26.1"]
["11742801_a_at",0.2870903,-0.04627037,-0.08170509,0.20298576,0.012390137,-0.012390137,0.97157013,0.91940325,-1.0101879,-0.014623615,1.0101879,"down","MAP2K3",5606,"0000165 // MAPK cascade // inferred from electronic annotation /// 0000187 // activation of MAPK activity // traceable author statement /// 0000187 // activation of MAPK activity // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0042035 // regulation of cytokine biosynthetic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045860 // positive regulation of protein kinase activity // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0060048 // cardiac muscle contraction // inferred from electronic annotation","0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004708 // MAP kinase kinase activity // inferred from electronic annotation /// 0004708 // MAP kinase kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation","chr17:21187957-21218552 (+) // 93.66 // p11.2"]
["11757854_s_at",-0.17728376,-0.07762098,0.03262329,0.0068998337,0.011206627,-0.0068998337,0.58951145,0.27015248,-1.0554289,-0.07782934,1.0554289,"down","PLEKHA5",54477,"","","0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0005545 // 1-phosphatidylinositol binding // non-traceable author statement","chr12:19528638-19529334 (+) // 92.82 // p12.3"]
["11741257_x_at",-0.24475193,0.11287737,0.19033527,0.04300785,-0.14043522,-0.04300785,0.8664075,0.66934127,1.047027,0.066298634,1.047027,"up","APOBEC3F",200316,"0002230 // positive regulation of defense response to virus by host // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0009615 // response to virus // inferred from electronic annotation /// 0009972 // cytidine deamination // inferred from direct assay /// 0010529 // negative regulation of transposition // inferred from direct assay /// 0016553 // base conversion or substitution editing // inferred from direct assay /// 0045071 // negative regulation of viral genome replication // inferred from direct assay /// 0045087 // innate immune response // inferred from direct assay /// 0045869 // negative regulation of retroviral genome replication // inferred from direct assay /// 0048525 // negative regulation of viral reproduction // inferred from direct assay /// 0080111 // DNA demethylation // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030895 // apolipoprotein B mRNA editing enzyme complex // traceable author statement","0003723 // RNA binding // inferred from direct assay /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004126 // cytidine deaminase activity // inferred from direct assay /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016814 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr22:39436672-39451973 (+) // 43.37 // q13.1"]
["11746431_a_at",0.25228405,-0.012494087,-0.14443874,0.17386055,0.012494087,-0.3096509,0.8869665,0.7120512,1.0518161,0.072882496,1.0518161,"up","FBXO11",80204,"0006464 // cellular protein modification process // inferred from direct assay /// 0006511 // ubiquitin-dependent protein catabolic process // non-traceable author statement /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0016567 // protein ubiquitination // non-traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0035246 // peptidyl-arginine N-methylation // inferred from direct assay","0000151 // ubiquitin ligase complex // non-traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // non-traceable author statement /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016274 // protein-arginine N-methyltransferase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:48034775-48132932 (-) // 92.73 // p16.3"]
["11750480_a_at",0.10822296,-0.011554718,0.11046219,0.011554718,-0.27486992,-0.09322548,0.3869188,0.11309519,1.1390969,0.18789043,1.1390969,"up","ATF2",1386,"0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0003151 // outflow tract morphogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred by curator /// 0006366 // transcription from RNA polymerase II promoter // inferred by curator /// 0006970 // response to osmotic stress // inferred from direct assay /// 0008063 // Toll signaling pathway // traceable author statement /// 0032915 // positive regulation of transforming growth factor beta2 production // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0060612 // adipose tissue development // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay","0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0001076 // RNA polymerase II transcription factor binding transcription factor activity // inferred by curator /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0001102 // RNA polymerase II activating transcription factor binding // inferred from physical interaction /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred by curator /// 0003713 // transcription coactivator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008140 // cAMP response element binding protein binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0035497 // cAMP response element binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr2:175978970-176032897 (-) // 94.46 // q31.1"]
["11720501_a_at",0.39742756,0.032878876,0.0010375977,-0.0010375977,-0.18124294,-0.22932816,0.40593442,0.12450088,1.2150235,0.28098422,1.2150235,"up","UBE4B",10277,"0000209 // protein polyubiquitination // inferred from electronic annotation /// 0003222 // ventricular trabecula myocardium morphogenesis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from direct assay /// 0009411 // response to UV // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0034976 // response to endoplasmic reticulum stress // inferred from electronic annotation /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // traceable author statement /// 0044257 // cellular protein catabolic process // inferred from electronic annotation","0000151 // ubiquitin ligase complex // traceable author statement /// 0000151 // ubiquitin ligase complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from sequence or structural similarity /// 0019899 // enzyme binding // inferred from electronic annotation /// 0034450 // ubiquitin-ubiquitin ligase activity // inferred from electronic annotation","chr1:10093010-10241297 (+) // 99.01 // p36.22"]
["11739795_a_at",-0.30771828,0.039539337,-0.039539337,-0.19483042,0.045258045,0.116173744,0.8034288,0.5521628,-1.065433,-0.0914399,1.065433,"down","RHBDF2",79651,"0006508 // proteolysis // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0050709 // negative regulation of protein secretion // inferred from sequence or structural similarity /// 0050709 // negative regulation of protein secretion // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from sequence or structural similarity /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from electronic annotation","chr17:74466975-74497872 (-) // 99.55 // q25.1"]
["11742664_x_at",0.10105634,0.03687644,-0.03687668,0.13120961,-0.05624914,-0.04267621,0.9120859,0.76711655,1.0160166,0.022923976,1.0160166,"up","","","","","","chr7:28318841-28319318 (-) // 100.0 // p15.1"]
["11731638_a_at",-0.05780506,0.067557335,0.05678034,-0.0058789253,0.0058789253,-0.11368656,0.6543418,0.33831838,1.0425185,0.06007298,1.0425185,"up","GAB1",2549,"0000187 // activation of MAPK activity // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008544 // epidermis development // inferred from electronic annotation /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0060711 // labyrinthine layer development // inferred from electronic annotation /// 0070102 // interleukin-6-mediated signaling pathway // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation","chr4:144257557-144395718 (+) // 96.62 // q31.21"]
["11758163_s_at",0.068380356,-0.09841919,-0.09602547,0.31006432,0.057308197,-0.057308197,0.6184145,0.2984465,-1.106019,-0.14537619,1.106019,"down","ZFP62",643836,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:180274614-180276504 (-) // 99.63 // q35.3"]
["11759983_at",-0.10815382,0.017100334,0.047415257,-0.3085885,0.012210369,-0.012210369,0.7583701,0.48020127,1.0631291,0.08831675,1.0631291,"up","VTI1A",143187,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0042147 // retrograde transport, endosome to Golgi // inferred from direct assay /// 0042147 // retrograde transport, endosome to Golgi // inferred from mutant phenotype /// 0048280 // vesicle fusion with Golgi apparatus // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0031201 // SNARE complex // traceable author statement /// 0031201 // SNARE complex // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0005484 // SNAP receptor activity // inferred from direct assay","chr10:114207015-114497532 (+) // 60.61 // q25.2"]
["11753948_a_at",-0.12653875,-0.022915363,0.02291584,-0.39243412,0.06897259,0.27139902,0.9671448,0.9078192,-1.0173565,-0.024825335,1.0173565,"down","FBXW8",26259,"0060712 // spongiotrophoblast layer development // inferred from electronic annotation /// 0060716 // labyrinthine layer blood vessel development // inferred from electronic annotation","0019005 // SCF ubiquitin ligase complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr12:117348769-117470625 (+) // 82.45 // q24.22"]
["11763598_a_at",0.05798769,-0.2532692,0.10078907,-0.6122465,-0.05798769,0.07790661,0.7872782,0.5252866,1.1219008,0.16594511,1.1219008,"up","","","","","","chr8:10983979-10987745 (-) // 61.36 // p23.1"]
["11750772_a_at",0.011590004,-0.061389685,0.19529915,-0.039518356,0.0023114681,-0.0023112297,0.75183845,0.47073162,1.043675,0.061672453,1.043675,"up","PDGFRA",5156,"0001553 // luteinization // inferred from sequence or structural similarity /// 0001553 // luteinization // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001775 // cell activation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from mutant phenotype /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008210 // estrogen metabolic process // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008585 // female gonad development // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // inferred from electronic annotation /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010035 // response to inorganic substance // inferred from electronic annotation /// 0010544 // negative regulation of platelet activation // inferred from direct assay /// 0010863 // positive regulation of phospholipase C activity // inferred from mutant phenotype /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0023019 // signal transduction involved in regulation of gene expression // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030325 // adrenal gland development // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0030539 // male genitalia development // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0033327 // Leydig cell differentiation // inferred from electronic annotation /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0035790 // platelet-derived growth factor receptor-alpha signaling pathway // inferred from direct assay /// 0035790 // platelet-derived growth factor receptor-alpha signaling pathway // inferred from mutant phenotype /// 0035790 // platelet-derived growth factor receptor-alpha signaling pathway // inferred from electronic annotation /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from electronic annotation /// 0038091 // positive regulation of cell proliferation by VEGF-activated platelet derived growth factor receptor signaling pathway // inferred from direct assay /// 0042060 // wound healing // inferred from sequence or structural similarity /// 0042060 // wound healing // inferred from electronic annotation /// 0042063 // gliogenesis // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from mutant phenotype /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from direct assay /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from electronic annotation /// 0048015 // phosphatidylinositol-mediated signaling // inferred from mutant phenotype /// 0048146 // positive regulation of fibroblast proliferation // inferred from direct assay /// 0048557 // embryonic digestive tract morphogenesis // inferred from sequence or structural similarity /// 0048557 // embryonic digestive tract morphogenesis // inferred from electronic annotation /// 0048701 // embryonic cranial skeleton morphogenesis // inferred from sequence or structural similarity /// 0048701 // embryonic cranial skeleton morphogenesis // inferred from electronic annotation /// 0048704 // embryonic skeletal system morphogenesis // inferred from sequence or structural similarity /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0050920 // regulation of chemotaxis // inferred from mutant phenotype /// 0055003 // cardiac myofibril assembly // inferred from sequence or structural similarity /// 0055003 // cardiac myofibril assembly // inferred from electronic annotation /// 0055093 // response to hyperoxia // inferred from electronic annotation /// 0060021 // palate development // inferred from electronic annotation /// 0060325 // face morphogenesis // inferred from electronic annotation /// 0060326 // cell chemotaxis // inferred from mutant phenotype /// 0060326 // cell chemotaxis // inferred from electronic annotation /// 0061298 // retina vasculature development in camera-type eye // inferred from sequence or structural similarity /// 0061298 // retina vasculature development in camera-type eye // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from mutant phenotype /// 0070527 // platelet aggregation // inferred from mutant phenotype /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation /// 0072277 // metanephric glomerular capillary formation // inferred from sequence or structural similarity /// 0072277 // metanephric glomerular capillary formation // inferred from electronic annotation /// 2000249 // regulation of actin cytoskeleton reorganization // traceable author statement /// 2000739 // regulation of mesenchymal stem cell differentiation // inferred from mutant phenotype","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031226 // intrinsic to plasma membrane // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from direct assay /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005018 // platelet-derived growth factor alpha-receptor activity // inferred from direct assay /// 0005018 // platelet-derived growth factor alpha-receptor activity // inferred from mutant phenotype /// 0005018 // platelet-derived growth factor alpha-receptor activity // inferred from electronic annotation /// 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from direct assay /// 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from electronic annotation /// 0005161 // platelet-derived growth factor receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0038085 // vascular endothelial growth factor binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation /// 0048407 // platelet-derived growth factor binding // inferred from direct assay /// 0048407 // platelet-derived growth factor binding // inferred from physical interaction /// 0048407 // platelet-derived growth factor binding // inferred from electronic annotation","chr4:55095446-55131514 (+) // 90.11 // q12"]
["11715767_s_at",0.13602066,0.12473488,0.044031143,-0.05462265,-0.051952362,-0.044031143,0.094827026,0.0064749955,1.1109529,0.1517976,1.1109529,"up","ACAA2",10449,"0006084 // acetyl-CoA metabolic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006635 // fatty acid beta-oxidation // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // non-traceable author statement /// 0006916 // anti-apoptosis // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0003988 // acetyl-CoA C-acyltransferase activity // non-traceable author statement /// 0003988 // acetyl-CoA C-acyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation","chr18:47309728-47340330 (-) // 93.3 // q21.1"]
["11742445_at",0.0065977573,-0.006597519,-0.3331685,0.027421951,-0.13986826,0.106497526,0.7429156,0.45742628,-1.0785351,-0.1090731,1.0785351,"down","","","0007155 // cell adhesion // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr16:819427-832926 (-) // 100.0 // p13.3"]
["11736878_a_at",0.00077199936,0.17886496,-0.00077199936,-0.022928,0.32907248,-0.041606903,0.9433236,0.8422403,-1.0199918,-0.02855749,1.0199918,"down","GPLD1",2822,"0001503 // ossification // inferred from sequence or structural similarity /// 0002042 // cell migration involved in sprouting angiogenesis // inferred from mutant phenotype /// 0002062 // chondrocyte differentiation // inferred from sequence or structural similarity /// 0002430 // complement receptor mediated signaling pathway // inferred from direct assay /// 0006507 // GPI anchor release // inferred from direct assay /// 0006507 // GPI anchor release // inferred from mutant phenotype /// 0006507 // GPI anchor release // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008286 // insulin receptor signaling pathway // inferred from direct assay /// 0009749 // response to glucose stimulus // inferred from direct assay /// 0010595 // positive regulation of endothelial cell migration // inferred from mutant phenotype /// 0010694 // positive regulation of alkaline phosphatase activity // inferred from sequence or structural similarity /// 0010867 // positive regulation of triglyceride biosynthetic process // inferred from sequence or structural similarity /// 0010897 // negative regulation of triglyceride catabolic process // inferred from sequence or structural similarity /// 0010907 // positive regulation of glucose metabolic process // inferred from sequence or structural similarity /// 0010983 // positive regulation of high-density lipoprotein particle clearance // inferred from sequence or structural similarity /// 0032869 // cellular response to insulin stimulus // inferred from direct assay /// 0035690 // cellular response to drug // inferred from direct assay /// 0035701 // hematopoietic stem cell migration // traceable author statement /// 0035774 // positive regulation of insulin secretion involved in cellular response to glucose stimulus // inferred from sequence or structural similarity /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0045919 // positive regulation of cytolysis // inferred from direct assay /// 0046470 // phosphatidylcholine metabolic process // inferred from sequence or structural similarity /// 0046470 // phosphatidylcholine metabolic process // traceable author statement /// 0051044 // positive regulation of membrane protein ectodomain proteolysis // inferred from direct assay /// 0051047 // positive regulation of secretion // inferred from sequence or structural similarity /// 0070633 // transepithelial transport // inferred from sequence or structural similarity /// 0071277 // cellular response to calcium ion // inferred from direct assay /// 0071397 // cellular response to cholesterol // inferred from mutant phenotype /// 0071401 // cellular response to triglyceride // inferred from mutant phenotype /// 0071467 // cellular response to pH // inferred from direct assay /// 0097241 // hematopoietic stem cell migration to bone marrow // traceable author statement /// 1900076 // regulation of cellular response to insulin stimulus // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from sequence or structural similarity /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005622 // intracellular // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005792 // microsome // inferred from direct assay /// 0044444 // cytoplasmic part // inferred from direct assay","0004621 // glycosylphosphatidylinositol phospholipase D activity // inferred from direct assay /// 0004621 // glycosylphosphatidylinositol phospholipase D activity // traceable author statement /// 0004621 // glycosylphosphatidylinositol phospholipase D activity // inferred from electronic annotation /// 0004630 // phospholipase D activity // inferred from direct assay /// 0004630 // phospholipase D activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation /// 0017080 // sodium channel regulator activity // inferred from sequence or structural similarity","chr6:24428404-24489850 (-) // 90.09 // p22.3"]
["11742633_at",-0.3467841,0.05329609,0.07263613,-0.21661139,-0.05329609,0.16208601,0.942573,0.8402921,-1.0264596,-0.03767681,1.0264596,"down","OR4K13",390433,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr14:20502002-20502917 (-) // 100.0 // q11.2"]
["11749343_a_at",-0.0373621,0.08899498,-0.0037555695,0.0037555695,-0.16998196,0.054109573,0.79025406,0.5301311,1.0376582,0.053331323,1.0376582,"up","ABHD4",63874,"0016042 // lipid catabolic process // inferred from electronic annotation","","0016787 // hydrolase activity // inferred from electronic annotation","chr14:23067206-23073161 (+) // 93.19 // q11.2"]
["11726411_a_at",-0.07508373,0.061901093,-0.05274248,-0.119048595,0.05274248,0.4286065,0.7319032,0.4413349,-1.1040013,-0.14274184,1.1040013,"down","ZBTB7C",201501,"","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr18:45553257-45691937 (-) // 93.97 // q21.1"]
["11740863_at",0.22398996,-0.012770891,0.31893992,-0.17542458,-0.17598414,0.012770891,0.30012918,0.06846952,1.2223004,0.2895989,1.2223004,"up","TPH1",7166,"0006950 // response to stress // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009072 // aromatic amino acid family metabolic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042427 // serotonin biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046219 // indolalkylamine biosynthetic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060749 // mammary gland alveolus development // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0043005 // neuron projection // inferred from electronic annotation","0004497 // monooxygenase activity // inferred from electronic annotation /// 0004510 // tryptophan 5-monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016714 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:18041956-18063975 (-) // 99.5 // p15.1"]
["11752755_a_at",0.15880108,-0.051153183,0.05115366,0.44167948,-0.06212473,-0.13016129,0.9583943,0.8815841,-1.0211518,-0.03019732,1.0211518,"down","MTRF1",9617,"0006412 // translation // inferred from electronic annotation /// 0006415 // translational termination // inferred from electronic annotation /// 0006449 // regulation of translational termination // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement","0003747 // translation release factor activity // traceable author statement /// 0003747 // translation release factor activity // inferred from electronic annotation /// 0016149 // translation release factor activity, codon specific // inferred from electronic annotation","chr13:41826418-41837705 (-) // 72.7 // q14.11"]
["11728124_a_at",0.16365528,-0.059449196,-0.22961235,0.18109608,0.032042027,-0.032042503,0.7555028,0.47650373,-1.0733848,-0.10216731,1.0733848,"down","C16orf79",283870,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr16:2259253-2261317 (-) // 87.37 // p13.3"]
["11738984_x_at",0.22287464,0.053399086,0.117946625,-0.053399086,-0.29092216,-0.24956322,0.16365589,0.020333156,1.256463,0.32936823,1.256463,"up","MAP1LC3B",81631,"0006914 // autophagy // inferred from electronic annotation","0000421 // autophagic vacuole membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005776 // autophagic vacuole // inferred from sequence or structural similarity /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031090 // organelle membrane // inferred from sequence or structural similarity /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr16:87425405-87438380 (+) // 86.34 // q24.2"]
["11757900_a_at",0.3321886,0.0069270134,-0.0069274902,0.16441011,-0.15246391,-0.1487832,0.6747456,0.36367553,1.1144576,0.15634173,1.1144576,"up","SEBOX /// VTN","645832 /// 7448","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from direct assay /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0010811 // positive regulation of cell-substrate adhesion // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from direct assay /// 0014911 // positive regulation of smooth muscle cell migration // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030195 // negative regulation of blood coagulation // inferred by curator /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // traceable author statement /// 0032092 // positive regulation of protein binding // inferred from direct assay /// 0033627 // cell adhesion mediated by integrin // inferred from direct assay /// 0048260 // positive regulation of receptor-mediated endocytosis // inferred from direct assay /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0061302 // smooth muscle cell-matrix adhesion // inferred from direct assay /// 0090303 // positive regulation of wound healing // inferred by curator","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0071062 // alphav-beta3 integrin-vitronectin complex // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005044 // scavenger receptor activity // inferred from electronic annotation /// 0005178 // integrin binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0030247 // polysaccharide binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050840 // extracellular matrix binding // inferred from electronic annotation","chr17:26694305-26694974 (-) // 96.45 // q11.2"]
["11722691_at",0.16511059,0.12100792,0.0612278,-0.0612278,-0.1114254,-0.16037273,0.08746394,0.005470318,1.170229,0.22679082,1.170229,"up","AVEN",57099,"0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from direct assay","0005622 // intracellular // inferred from direct assay /// 0005624 // membrane fraction // inferred from direct assay /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr15:34158194-34331406 (-) // 97.65 // q14"]
["11758372_s_at",-0.08550644,0.00628376,-0.00628376,-0.08325386,0.027805328,0.17195797,0.73363644,0.44346425,-1.0477821,-0.06733867,1.0477821,"down","EI24",9538,"0006914 // autophagy // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","","chr11:125452238-125454066 (+) // 92.82 // q24.2"]
["11724590_a_at",0.2627325,-0.04079485,0.004518509,0.19485283,-0.030125141,-0.0045189857,0.9500268,0.86099964,1.0154241,0.022082452,1.0154241,"up","TCP10L",140290,"","0005634 // nucleus // inferred from electronic annotation","","chr21:33947151-33957837 (-) // 98.24 // q22.11"]
["11751673_a_at",0.0613575,-0.07413864,-0.06135702,0.2700796,-0.081355095,0.08704853,0.6641602,0.34989703,-1.0842047,-0.11663713,1.0842047,"down","ZMIZ2",83637,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0043596 // nuclear replication fork // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:44804012-44807583 (+) // 99.7 // p13"]
["11754663_s_at",-0.062651634,-0.09303665,-0.09373474,0.096087456,0.062651634,0.16164112,0.07152375,0.0035215255,-1.1407119,-0.18993448,1.1407119,"down","COPS7A",50813,"0010388 // cullin deneddylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008180 // signalosome // inferred from direct assay /// 0008180 // signalosome // inferred from electronic annotation","","chr12:6833202-6841030 (+) // 99.3 // p13.31"]
["11719124_at",-0.48869658,0.017540455,0.076413155,-0.3152523,-0.017540455,0.18263626,0.9010799,0.7413318,-1.0581387,-0.08152878,1.0581387,"down","TIMELESS",8914,"0002009 // morphogenesis of an epithelium // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007623 // circadian rhythm // inferred from sequence or structural similarity /// 0007623 // circadian rhythm // traceable author statement /// 0009582 // detection of abiotic stimulus // traceable author statement /// 0009628 // response to abiotic stimulus // traceable author statement /// 0033261 // regulation of S phase // inferred from mutant phenotype /// 0042127 // regulation of cell proliferation // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0048511 // rhythmic process // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr12:56810157-56843191 (-) // 91.81 // q13.3"]
["11744454_a_at",0.3527584,0.013869286,-0.013869286,0.1539936,-0.105620384,-0.20649624,0.66060734,0.34565032,1.1252877,0.17029384,1.1252877,"up","PARD3",56288,"0006461 // protein complex assembly // traceable author statement /// 0006612 // protein targeting to membrane // inferred from sequence or structural similarity /// 0007049 // cell cycle // inferred from electronic annotation /// 0007163 // establishment or maintenance of cell polarity // traceable author statement /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // traceable author statement /// 0007409 // axonogenesis // traceable author statement /// 0008356 // asymmetric cell division // traceable author statement /// 0034329 // cell junction assembly // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0070830 // tight junction assembly // inferred from sequence or structural similarity /// 0070830 // tight junction assembly // traceable author statement /// 0090162 // establishment of epithelial cell polarity // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0005911 // cell-cell junction // inferred from sequence or structural similarity /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0005923 // tight junction // inferred from direct assay /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0005923 // tight junction // inferred from electronic annotation /// 0005923 // tight junction // traceable author statement /// 0005938 // cell cortex // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation","0005080 // protein kinase C binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from sequence or structural similarity /// 0005547 // phosphatidylinositol-3,4,5-trisphosphate binding // inferred from sequence or structural similarity /// 0008289 // lipid binding // inferred from electronic annotation /// 0032266 // phosphatidylinositol-3-phosphate binding // inferred from sequence or structural similarity","chr10:34601189-35104211 (-) // 92.45 // p11.21"]
["11746108_a_at",-0.14661837,-0.016273975,0.0105342865,0.049930096,-0.0033068657,0.0033068657,0.57909834,0.259376,-1.047848,-0.06742944,1.047848,"down","MPP2",4355,"0007165 // signal transduction // traceable author statement","0005624 // membrane fraction // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay","0004385 // guanylate kinase activity // traceable author statement","chr17:41953532-41977992 (-) // 97.74 // q21.31"]
["11754897_a_at",0.0071353912,-0.0071353912,-0.035443783,-0.011287212,0.060820103,0.035443783,0.48240724,0.17732702,-1.0282137,-0.040140193,1.0282137,"down","ACSF3",197322,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from direct assay /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0090410 // malonate catabolic process // inferred from direct assay","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016878 // acid-thiol ligase activity // inferred from direct assay /// 0090409 // malonyl-CoA synthetase activity // inferred from direct assay","chr16:89202955-89222254 (+) // 99.8 // q24.3"]
["11731440_a_at",0.10473299,0.01680851,0.06289768,-0.01680851,-0.13740015,-0.26907635,0.27760994,0.058437586,1.1507503,0.20257479,1.1507503,"up","IFT57",55081,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0042981 // regulation of apoptotic process // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from sequence or structural similarity /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr3:107879658-107941417 (-) // 94.57 // q13.12"]
["11718683_s_at",0.12407756,-0.18983507,-0.106776714,0.06732607,-0.055434704,0.055434465,0.75488514,0.4757996,-1.0569838,-0.079953305,1.0569838,"down","AFP",174,"0001542 // ovulation from ovarian follicle // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0019953 // sexual reproduction // inferred from electronic annotation /// 0031016 // pancreas development // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0042448 // progesterone metabolic process // inferred from electronic annotation /// 0060395 // SMAD protein signal transduction // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0046872 // metal ion binding // inferred from electronic annotation","chr4:74301879-74321891 (+) // 97.83 // q13.3"]
["11740271_at",0.051048756,-0.041422367,0.04142213,-0.1774733,-0.12235808,0.042533398,0.54546136,0.22828875,1.0738423,0.10278212,1.0738423,"up","KIAA1383",54627,"","","","chr1:232940637-232946092 (+) // 94.45 // q42.2"]
["11743659_a_at",0.12783813,0.05212307,-0.076402664,0.13072777,-0.05212307,-0.076402664,0.89182734,0.72197396,1.0236946,0.033785425,1.0236946,"up","SNRNP27",11017,"0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // non-traceable author statement","chr2:70120691-70132348 (+) // 76.16 // p13.3"]
["11738627_a_at",0.028690815,-0.08137846,-0.25214195,0.058184147,-0.028690815,0.13691378,0.47531098,0.17239796,-1.1150272,-0.15707889,1.1150272,"down","ARHGAP6",395,"0007015 // actin filament organization // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007202 // activation of phospholipase C activity // inferred from direct assay /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // non-traceable author statement /// 0007266 // Rho protein signal transduction // traceable author statement /// 0010518 // positive regulation of phospholipase activity // inferred from direct assay /// 0030041 // actin filament polymerization // non-traceable author statement /// 0032321 // positive regulation of Rho GTPase activity // inferred from sequence or structural similarity /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0043087 // regulation of GTPase activity // inferred from sequence or structural similarity /// 0043087 // regulation of GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0048041 // focal adhesion assembly // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051497 // negative regulation of stress fiber assembly // inferred from mutant phenotype /// 0051895 // negative regulation of focal adhesion assembly // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from mutant phenotype /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005884 // actin filament // non-traceable author statement /// 0015629 // actin cytoskeleton // inferred from sequence or structural similarity /// 0015629 // actin cytoskeleton // inferred from electronic annotation","0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // inferred from sequence or structural similarity /// 0005100 // Rho GTPase activator activity // inferred from electronic annotation /// 0016004 // phospholipase activator activity // inferred from direct assay /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0043274 // phospholipase binding // inferred from physical interaction","chrX:11161516-11683821 (-) // 97.28 // p22.2"]
["11760539_a_at",0.093182325,0.5511975,-0.01589942,-0.01722455,-0.1303401,0.015899658,0.5479861,0.2304437,1.191998,0.25338182,1.191998,"up","IBTK",25998,"0001933 // negative regulation of protein phosphorylation // inferred from direct assay /// 0051209 // release of sequestered calcium ion into cytosol // inferred from direct assay /// 0061099 // negative regulation of protein tyrosine kinase activity // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0019901 // protein kinase binding // inferred from direct assay /// 0030292 // protein tyrosine kinase inhibitor activity // inferred from direct assay","chr6:82901047-82957471 (-) // 100.0 // q14.1"]
["11715669_s_at",0.6950474,0.050743103,-0.050742626,0.50905514,-0.18206453,-0.1957283,0.8302067,0.59912616,1.1391269,0.18792847,1.1391269,"up","DCTN1",1639,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007067 // mitosis // non-traceable author statement /// 0007399 // nervous system development // non-traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement","0000776 // kinetochore // inferred from direct assay /// 0000922 // spindle pole // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005868 // cytoplasmic dynein complex // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation /// 0030286 // dynein complex // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from electronic annotation","0003774 // motor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr2:74588284-74607482 (-) // 92.76 // p13.1"]
["11726170_at",-0.24325085,0.11751795,0.013381004,-0.033575058,-0.013381004,0.109381676,0.8529782,0.6422678,-1.0412086,-0.058259167,1.0412086,"down","FLT4",2324,"0001525 // angiogenesis // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from mutant phenotype /// 0001938 // positive regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001944 // vasculature development // inferred from sequence or structural similarity /// 0001944 // vasculature development // inferred from electronic annotation /// 0001945 // lymph vessel development // inferred from sequence or structural similarity /// 0001945 // lymph vessel development // inferred from electronic annotation /// 0001946 // lymphangiogenesis // inferred from mutant phenotype /// 0001946 // lymphangiogenesis // inferred from sequence or structural similarity /// 0001946 // lymphangiogenesis // inferred from electronic annotation /// 0002040 // sprouting angiogenesis // inferred from sequence or structural similarity /// 0002040 // sprouting angiogenesis // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from mutant phenotype /// 0010595 // positive regulation of endothelial cell migration // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0030307 // positive regulation of cell growth // inferred from electronic annotation /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from direct assay /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from mutant phenotype /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from direct assay /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from mutant phenotype /// 0038084 // vascular endothelial growth factor signaling pathway // traceable author statement /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043410 // positive regulation of MAPK cascade // inferred from mutant phenotype /// 0046330 // positive regulation of JNK cascade // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from direct assay /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from genetic interaction /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from mutant phenotype /// 0048010 // vascular endothelial growth factor receptor signaling pathway // traceable author statement /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from electronic annotation /// 0048514 // blood vessel morphogenesis // inferred from sequence or structural similarity /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0060312 // regulation of blood vessel remodeling // inferred from sequence or structural similarity /// 0060312 // regulation of blood vessel remodeling // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from mutant phenotype /// 0090037 // positive regulation of protein kinase C signaling cascade // inferred from mutant phenotype","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from mutant phenotype /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from direct assay /// 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from mutant phenotype /// 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from electronic annotation /// 0005021 // vascular endothelial growth factor-activated receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from physical interaction /// 0019838 // growth factor binding // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from physical interaction","chr5:180028505-180076678 (-) // 99.74 // q35.3"]
["11752178_a_at",-0.15727186,0.0550313,0.06638622,0.020849705,-0.020849943,-0.09184456,0.93706894,0.8266202,1.0130206,0.018663561,1.0130206,"up","SEMA4D",10507,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0006916 // anti-apoptosis // traceable author statement /// 0006955 // immune response // traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0008360 // regulation of cell shape // inferred from mutant phenotype /// 0010693 // negative regulation of alkaline phosphatase activity // inferred from mutant phenotype /// 0010693 // negative regulation of alkaline phosphatase activity // inferred from electronic annotation /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // inferred from mutant phenotype /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from sequence or structural similarity /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031344 // regulation of cell projection organization // inferred from mutant phenotype /// 0032321 // positive regulation of Rho GTPase activity // inferred from mutant phenotype /// 0032321 // positive regulation of Rho GTPase activity // inferred from sequence or structural similarity /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0043931 // ossification involved in bone maturation // inferred from mutant phenotype /// 0043931 // ossification involved in bone maturation // inferred from electronic annotation /// 0045668 // negative regulation of osteoblast differentiation // inferred from sequence or structural similarity /// 0045668 // negative regulation of osteoblast differentiation // inferred from electronic annotation /// 0048672 // positive regulation of collateral sprouting // inferred from mutant phenotype /// 0048814 // regulation of dendrite morphogenesis // inferred from mutant phenotype /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from sequence or structural similarity /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050732 // negative regulation of peptidyl-tyrosine phosphorylation // inferred from sequence or structural similarity /// 0050732 // negative regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050772 // positive regulation of axonogenesis // inferred from electronic annotation /// 0061383 // trabecula morphogenesis // inferred from sequence or structural similarity /// 0061383 // trabecula morphogenesis // inferred from electronic annotation /// 0070486 // leukocyte aggregation // inferred from mutant phenotype /// 0071526 // semaphorin-plexin signaling pathway // inferred from mutant phenotype","0005615 // extracellular space // inferred from sequence or structural similarity /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from mutant phenotype /// 0005102 // receptor binding // inferred from direct assay /// 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030215 // semaphorin receptor binding // inferred from sequence or structural similarity /// 0030215 // semaphorin receptor binding // inferred from electronic annotation","chr9:91977153-92070868 (-) // 88.04 // q22.2"]
["11742535_x_at",-0.11383152,-0.012161732,0.30425262,-0.15472174,0.012161255,0.1955595,0.929084,0.8087423,1.0293641,0.041753385,1.0293641,"up","FAM58BP",339521,"0000079 // regulation of cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","","0019901 // protein kinase binding // inferred from electronic annotation","chr1:200182655-200183643 (+) // 94.74 // q32.1"]
["11723101_a_at",0.052007675,-0.052007675,-0.17161798,0.12790298,0.12705755,-0.09955263,0.65101886,0.33482832,-1.0784869,-0.10900868,1.0784869,"down","DDX10",1662,"","","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003724 // RNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr11:108535803-108811654 (+) // 96.83 // q22.3"]
["11721897_a_at",-0.16076946,0.22565985,0.06845808,0.021326065,-0.021326065,-0.05779457,0.8339043,0.6075663,1.0451531,0.06371435,1.0451531,"up","DHX58",79132,"0009615 // response to virus // inferred from sequence or structural similarity /// 0009615 // response to virus // inferred from electronic annotation /// 0032480 // negative regulation of type I interferon production // inferred from direct assay /// 0032481 // positive regulation of type I interferon production // inferred from sequence or structural similarity /// 0039534 // negative regulation of MDA-5 signaling pathway // inferred from mutant phenotype /// 0039536 // negative regulation of RIG-I signaling pathway // inferred from direct assay /// 0039536 // negative regulation of RIG-I signaling pathway // inferred from mutant phenotype /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation /// 0045088 // regulation of innate immune response // inferred from direct assay /// 0045824 // negative regulation of innate immune response // inferred from direct assay /// 1900245 // positive regulation of MDA-5 signaling pathway // inferred from sequence or structural similarity /// 1900246 // positive regulation of RIG-I signaling pathway // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0003727 // single-stranded RNA binding // inferred from direct assay /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016817 // hydrolase activity, acting on acid anhydrides // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:40253421-40264751 (-) // 96.64 // q21.2"]
["11753099_a_at",0.2294569,0.07008886,-0.019880772,-0.14121819,-0.10259628,0.019880772,0.41131932,0.1277967,1.1233957,0.16786616,1.1233957,"up","SORBS3",10174,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0031589 // cell-substrate adhesion // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0051495 // positive regulation of cytoskeleton organization // non-traceable author statement /// 0051496 // positive regulation of stress fiber assembly // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0017166 // vinculin binding // inferred from physical interaction","chr8:22409439-22424207 (+) // 99.92 // p21.3"]
["11757127_at",-0.37637424,-0.056819916,0.36363363,-0.105612755,0.056819916,0.06655502,0.9649277,0.90176743,-1.0203807,-0.029107567,1.0203807,"down","SNORA23",677808,"","","","chr11:9450312-9450501 (+) // 99.47 // p15.4"]
["11737769_a_at",-0.15212631,-0.16640854,-0.24480438,0.1965437,0.15212631,0.32955265,0.060326383,0.002403024,-1.33224,-0.41385397,1.33224,"down","MYO1C",4641,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation","0001725 // stress fiber // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005902 // microvillus // inferred from direct assay /// 0005903 // brush border // inferred from electronic annotation /// 0009925 // basal plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016328 // lateral plasma membrane // inferred from direct assay /// 0016459 // myosin complex // inferred from electronic annotation /// 0016461 // unconventional myosin complex // traceable author statement /// 0031941 // filamentous actin // inferred from direct assay /// 0032420 // stereocilium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045160 // myosin I complex // inferred from electronic annotation /// 0060171 // stereocilium membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from electronic annotation","chr17:1367481-1389495 (-) // 87.7 // p13.3"]
["11725994_a_at",0.019041061,-0.14858627,-0.15624332,0.17092896,-0.0018696785,0.0018696785,0.41893438,0.13242409,-1.111293,-0.15223919,1.111293,"down","MRPL11",65003,"0006412 // translation // non-traceable author statement /// 0006412 // translation // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005761 // mitochondrial ribosome // non-traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation","chr11:66202549-66206299 (-) // 84.49 // q13.2"]
["11734788_at",-0.08563614,0.04424143,0.07902765,-0.04424143,-0.09381914,0.07235479,0.8565763,0.6496246,1.0241636,0.034446195,1.0241636,"up","OLFM3",118427,"0042462 // eye photoreceptor cell development // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation","","chr1:102268126-102462790 (-) // 96.6 // p21.1"]
["11734033_at",-0.089261055,-0.002728939,-0.077334404,0.1618805,0.002728939,0.03320217,0.35126287,0.0932932,-1.0885282,-0.12237872,1.0885282,"down","C15orf61",145853,"","0005576 // extracellular region // inferred from electronic annotation","","chr15:67813405-67819735 (+) // 100.0 // q23"]
["11722956_at",0.10808039,0.062363625,-0.062363625,-0.2811246,-0.13205719,0.115068436,0.658938,0.34394976,1.0983957,0.13539788,1.0983957,"up","GLTPD2",388323,"0046836 // glycolipid transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0017089 // glycolipid transporter activity // inferred from electronic annotation /// 0051861 // glycolipid binding // inferred from electronic annotation","chr17:4692253-4693685 (+) // 99.61 // p13.2"]
["11744500_a_at",0.13601494,-0.00089645386,-0.025065422,0.038555145,0.00089645386,-0.08869076,0.73507506,0.4452119,1.03749,0.053097446,1.03749,"up","ASXL1",171023,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from sequence or structural similarity /// 0035359 // negative regulation of peroxisome proliferator activated receptor signaling pathway // inferred from sequence or structural similarity /// 0035522 // monoubiquitinated histone H2A deubiquitination // inferred from direct assay /// 0045599 // negative regulation of fat cell differentiation // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0048386 // positive regulation of retinoic acid receptor signaling pathway // inferred from sequence or structural similarity /// 0048387 // negative regulation of retinoic acid receptor signaling pathway // inferred from sequence or structural similarity","0000790 // nuclear chromatin // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0035517 // PR-DUB complex // inferred from direct assay","0003713 // transcription coactivator activity // inferred from sequence or structural similarity /// 0003714 // transcription corepressor activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0042974 // retinoic acid receptor binding // inferred from sequence or structural similarity /// 0042975 // peroxisome proliferator activated receptor binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:30947549-31027121 (+) // 99.97 // q11.21"]
["11763440_at",-0.30938148,-0.0030899048,0.0030903816,-0.10909557,0.08231211,0.078520775,0.6837556,0.375973,-1.0870157,-0.12037284,1.0870157,"down","MLPH",79083,"0006605 // protein targeting // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0030318 // melanocyte differentiation // inferred from electronic annotation /// 0032400 // melanosome localization // inferred from electronic annotation /// 0043473 // pigmentation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0017022 // myosin binding // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0031489 // myosin V binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051010 // microtubule plus-end binding // inferred from electronic annotation","chr2:238457795-238460620 (+) // 73.7 // q37.3"]
["11761552_at",-0.13920403,-0.13083982,-0.019798279,0.5234308,0.18689156,0.019798279,0.346385,0.09042873,-1.2657458,-0.33998764,1.2657458,"down","C15orf29",79768,"","0005730 // nucleolus // inferred from direct assay","","chr15:34440436-34502262 (-) // 76.25 // q14"]
["11744354_a_at",0.16295719,-0.07419491,-0.110304356,0.083536625,-0.037499905,0.037499905,0.89321876,0.7246835,-1.0245755,-0.03502626,1.0245755,"down","TATDN2",9797,"0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0004518 // nuclease activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016888 // endodeoxyribonuclease activity, producing 5'-phosphomonoesters // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:10290218-10323014 (+) // 99.07 // p25.3"]
["11741030_a_at",-0.06983805,-0.17160511,0.06983805,0.20922756,0.29922056,-0.086177826,0.5344606,0.21871822,-1.147074,-0.19795844,1.147074,"down","PTCD2",79810,"0001822 // kidney development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0007005 // mitochondrion organization // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0048747 // muscle fiber development // inferred from electronic annotation /// 0050684 // regulation of mRNA processing // inferred from electronic annotation /// 0055010 // ventricular cardiac muscle tissue morphogenesis // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation","","chr5:71616199-71655180 (+) // 99.9 // q13.2"]
["11721240_at",-0.008573055,-0.024506092,-0.107058525,0.17812014,0.0486598,0.008573055,0.3699467,0.103535645,-1.0906314,-0.12516356,1.0906314,"down","ZNF787",126208,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:56598731-56632678 (-) // 86.34 // q13.43"]
["11718047_a_at",-0.00024604797,-0.050384045,-0.00032424927,0.14272833,0.00024604797,0.038223743,0.46741837,0.16605012,-1.0551032,-0.07738409,1.0551032,"down","ITPK1",3705,"0007165 // signal transduction // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032957 // inositol trisphosphate metabolic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003824 // catalytic activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047325 // inositol tetrakisphosphate 1-kinase activity // inferred from electronic annotation /// 0052725 // inositol-1,3,4-trisphosphate 6-kinase activity // inferred from electronic annotation /// 0052726 // inositol-1,3,4-trisphosphate 5-kinase activity // inferred from electronic annotation","chr14:93403258-93582263 (-) // 91.79 // q32.12"]
["11720597_s_at",0.32299042,-0.059790134,0.059790134,0.06464577,-0.25223446,-0.2021532,0.496384,0.1880521,1.1790112,0.23757745,1.1790112,"up","CSRNP2",81566,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0010923 // negative regulation of phosphatase activity // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019902 // phosphatase binding // inferred from direct assay","chr12:51454989-51477377 (-) // 97.08 // q13.12"]
["11717857_a_at",0.07437897,-0.041885376,0.004693985,0.07068062,-0.004693985,-0.030077934,0.9974226,0.99295026,1.0002955,0.000426282,1.0002955,"up","DHX29",54505,"0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr5:54551890-54603521 (-) // 96.85 // q11.2"]
["11723794_a_at",-0.116532326,0.017172813,-0.017172813,-0.17022324,0.08766413,0.11288023,0.8553208,0.6467279,-1.0345125,-0.048951104,1.0345125,"down","SLC29A2",3177,"0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0015853 // adenine transport // inferred from electronic annotation /// 0015854 // guanine transport // inferred from electronic annotation /// 0015858 // nucleoside transport // inferred from direct assay /// 0015858 // nucleoside transport // inferred from electronic annotation /// 0015858 // nucleoside transport // traceable author statement /// 0015862 // uridine transport // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0035344 // hypoxanthine transport // inferred from electronic annotation /// 0035364 // thymine transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","0005337 // nucleoside transmembrane transporter activity // inferred from electronic annotation /// 0005337 // nucleoside transmembrane transporter activity // traceable author statement","chr11:66129558-66139961 (-) // 85.71 // q13.2"]
["11744478_s_at",0.0004620552,-0.24762106,-0.0004620552,0.3147502,0.29864764,-0.28335214,0.71520114,0.4178124,-1.1427863,-0.19255559,1.1427863,"down","HBG1 /// HBG2 /// LOC100653006 /// LOC100653319","100653006 /// 100653319 /// 3047 /// 3048","0002026 // regulation of the force of heart contraction // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0007517 // muscle organ development // non-traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0015671 // oxygen transport // inferred from electronic annotation /// 0030049 // muscle filament sliding // traceable author statement /// 0032781 // positive regulation of ATPase activity // inferred from mutant phenotype /// 0060048 // cardiac muscle contraction // inferred from mutant phenotype","0005829 // cytosol // traceable author statement /// 0005833 // hemoglobin complex // inferred from electronic annotation /// 0005859 // muscle myosin complex // non-traceable author statement /// 0016459 // myosin complex // inferred from electronic annotation /// 0031672 // A band // inferred from mutant phenotype","0003785 // actin monomer binding // inferred from direct assay /// 0005344 // oxygen transporter activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008307 // structural constituent of muscle // non-traceable author statement /// 0019825 // oxygen binding // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0032038 // myosin II heavy chain binding // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from mutant phenotype","chr11:5274421-5276011 (-) // 89.95 // p15.4"]
["11751574_a_at",-0.0864687,-0.01847744,0.01847744,-0.14113045,0.2546835,0.18721533,0.6747527,0.36373687,-1.0935954,-0.12907906,1.0935954,"down","TMEM119",338773,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:108985051-108991833 (-) // 97.52 // q23.3"]
["11758986_at",-0.21954727,0.117165565,0.03342247,-0.06450462,-0.03342247,0.13038826,0.92058146,0.78853285,-1.0237098,-0.033806764,1.0237098,"down","ZNF48",197407,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:30406770-30411429 (+) // 90.37 // p11.2"]
["11759807_a_at",0.08530903,0.01894021,0.16826558,-0.23418641,-0.018939972,-0.1814084,0.22574209,0.038882755,1.1774642,0.23568325,1.1774642,"up","TXLNG2P",246126,"","","","chrY:21729672-21751733 (+) // 84.18 // q11.222"]
["11722339_a_at",0.14510465,0.024633408,-0.024633408,-0.03589344,0.16374516,-0.0721395,0.90729356,0.75458133,1.0208688,0.029797435,1.0208688,"up","DIAPH2",1730,"0000910 // cytokinesis // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007292 // female gamete generation // traceable author statement /// 0016043 // cellular component organization // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030041 // actin filament polymerization // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0048477 // oogenesis // inferred from electronic annotation","0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003779 // actin binding // inferred from electronic annotation /// 0005102 // receptor binding // traceable author statement /// 0017048 // Rho GTPase binding // inferred from electronic annotation","chrX:95939661-96724837 (+) // 99.5 // q21.33"]
["11726523_s_at",0.24641228,0.05696106,-0.11013794,0.18105507,-0.05696106,-0.20148087,0.8215648,0.58433884,1.0645232,0.09020742,1.0645232,"up","ZFHX3",463,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007517 // muscle organ development // inferred from electronic annotation /// 0045662 // negative regulation of myoblast differentiation // inferred from direct assay /// 0045663 // positive regulation of myoblast differentiation // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:72816787-73082274 (-) // 95.7 // q22.2"]
["11728566_x_at",0.079679966,-0.07276821,-0.03561306,0.1266141,0.035612583,-0.10320282,0.8983779,0.7365444,-1.0204756,-0.029241724,1.0204756,"down","FAM210A",125228,"","0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr18:13663345-13726591 (-) // 82.65 // p11.21"]
["11746202_x_at",-0.030712128,0.27440643,0.047204018,0.0027923584,-0.0027923584,-0.1179266,0.5622266,0.24315606,1.0990636,0.13627492,1.0990636,"up","NAB1",4664,"0001958 // endochondral ossification // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0014037 // Schwann cell differentiation // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation /// 0045682 // regulation of epidermis development // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // non-traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0008134 // transcription factor binding // inferred from electronic annotation","chr2:191513759-191555999 (+) // 95.63 // q32.2"]
["11754138_s_at",0.10774422,-0.0022239685,0.0022239685,-0.014089584,0.0250206,-0.08856392,0.5961851,0.27585405,1.0437617,0.06179241,1.0437617,"up","PSPH",5723,"0006563 // L-serine metabolic process // inferred from direct assay /// 0006563 // L-serine metabolic process // traceable author statement /// 0006564 // L-serine biosynthetic process // not recorded /// 0006564 // L-serine biosynthetic process // traceable author statement /// 0006564 // L-serine biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // traceable author statement /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0033574 // response to testosterone stimulus // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005737 // cytoplasm // not recorded /// 0005829 // cytosol // traceable author statement /// 0019717 // synaptosome // inferred from electronic annotation","0000287 // magnesium ion binding // inferred from direct assay /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004647 // phosphoserine phosphatase activity // inferred from direct assay /// 0004647 // phosphoserine phosphatase activity // traceable author statement /// 0004647 // phosphoserine phosphatase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:56079260-56088925 (-) // 49.3 // p11.2"]
["11722719_s_at",-0.11122131,0.0043201447,0.011423111,-0.098195076,-0.0043201447,0.08555412,0.887512,0.71312183,-1.0183069,-0.02617236,1.0183069,"down","BAIAP2",10458,"0007165 // signal transduction // inferred from electronic annotation /// 0007409 // axonogenesis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0009617 // response to bacterium // inferred from mutant phenotype /// 0016358 // dendrite development // inferred from electronic annotation /// 0032956 // regulation of actin cytoskeleton organization // inferred from mutant phenotype /// 0046847 // filopodium assembly // inferred from electronic annotation /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0051017 // actin filament bundle assembly // inferred from electronic annotation","0001726 // ruffle // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0030175 // filopodium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // traceable author statement /// 0008093 // cytoskeletal adaptor activity // inferred from electronic annotation /// 0008093 // cytoskeletal adaptor activity // traceable author statement /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0070064 // proline-rich region binding // inferred from direct assay","chr17:79008946-79084378 (+) // 98.74 // q25.3"]
["11763392_at",-0.076208115,0.08469963,-0.01854229,0.18071651,0.01854229,-0.21233082,0.997648,0.99387777,1.0006983,0.0010071228,1.0006983,"up","LOC100132005",100132005,"","","","chr6:38147073-38149010 (+) // 99.64 // p21.2"]
["11763882_at",0.017942905,-0.030330181,0.016061783,-0.076981544,-0.016061783,0.20391083,0.88240206,0.7015658,-1.025076,-0.03573092,1.025076,"down","","","","","","chr9:128506035-128508208 (-) // 97.61 // q33.3"]
["11727631_s_at",-0.05808544,0.072491646,0.05808544,-0.22839355,-0.1313858,0.16755772,0.78567773,0.5227035,1.0630709,0.08823781,1.0630709,"up","APBA2",321,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation","0001540 // beta-amyloid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr15:29131174-29410518 (+) // 97.63 // q13.1"]
["11722485_a_at",0.078746796,-0.021020412,-0.0014638901,0.04780054,0.0014638901,-0.003051281,0.97444713,0.9274873,1.0023246,0.0033497699,1.0023246,"up","UTP14C",9724,"0006364 // rRNA processing // inferred from electronic annotation /// 0007126 // meiosis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0032040 // small-subunit processome // inferred from electronic annotation","","chr13:52586522-52607790 (+) // 88.83 // q14.3"]
["11724880_s_at",-0.014719486,0.02345705,-0.14632082,0.12298775,0.014719486,-0.057892323,0.6868267,0.38014284,-1.0515125,-0.07246597,1.0515125,"down","ZNF217",7764,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0000118 // histone deacetylase complex // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:52183609-52199636 (-) // 99.06 // q13.2"]
["11738336_at",-0.17358398,0.10773468,-0.02361393,-0.2080121,0.02361393,0.028172493,0.94757855,0.85300297,1.015545,0.022254184,1.015545,"up","C7orf65",401335,"","","","chr7:47694841-47701246 (+) // 87.67 // p12.3"]
["11715348_x_at",-0.014435291,0.056523323,-0.15137482,-0.067518234,0.014435291,0.15018082,0.756839,0.47826645,-1.0488402,-0.06879484,1.0488402,"down","HBB",3043,"0006810 // transport // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0010942 // positive regulation of cell death // inferred from direct assay /// 0015671 // oxygen transport // non-traceable author statement /// 0015671 // oxygen transport // traceable author statement /// 0015671 // oxygen transport // inferred from electronic annotation /// 0030185 // nitric oxide transport // non-traceable author statement /// 0042542 // response to hydrogen peroxide // inferred from direct assay /// 0042744 // hydrogen peroxide catabolic process // inferred from direct assay /// 0045429 // positive regulation of nitric oxide biosynthetic process // non-traceable author statement /// 0050880 // regulation of blood vessel size // inferred from electronic annotation /// 0051291 // protein heterooligomerization // inferred from direct assay /// 0070293 // renal absorption // inferred from mutant phenotype","0005829 // cytosol // traceable author statement /// 0005833 // hemoglobin complex // inferred from direct assay /// 0005833 // hemoglobin complex // non-traceable author statement /// 0005833 // hemoglobin complex // traceable author statement /// 0005833 // hemoglobin complex // inferred from electronic annotation /// 0031838 // haptoglobin-hemoglobin complex // inferred from direct assay","0004601 // peroxidase activity // inferred from direct assay /// 0005344 // oxygen transporter activity // non-traceable author statement /// 0005344 // oxygen transporter activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019825 // oxygen binding // inferred from direct assay /// 0019825 // oxygen binding // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0030492 // hemoglobin binding // inferred from direct assay /// 0031720 // haptoglobin binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:5246694-5248427 (-) // 79.06 // p15.4"]
["11739841_a_at",0.095286846,0.028468132,0.011595249,-0.011595249,-0.111773014,-0.10380173,0.23610765,0.04227902,1.0873679,0.12084013,1.0873679,"up","BCL6",604,"0000060 // protein import into nucleus, translocation // inferred from genetic interaction /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001953 // negative regulation of cell-matrix adhesion // inferred from electronic annotation /// 0002467 // germinal center formation // inferred from electronic annotation /// 0002634 // regulation of germinal center formation // non-traceable author statement /// 0002829 // negative regulation of type 2 immune response // inferred from electronic annotation /// 0002903 // negative regulation of B cell apoptotic process // non-traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0007266 // Rho protein signal transduction // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008104 // protein localization // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030183 // B cell differentiation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0030890 // positive regulation of B cell proliferation // inferred from electronic annotation /// 0032319 // regulation of Rho GTPase activity // inferred from electronic annotation /// 0032764 // negative regulation of mast cell cytokine production // inferred from electronic annotation /// 0035024 // negative regulation of Rho protein signal transduction // inferred from electronic annotation /// 0042092 // type 2 immune response // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043380 // regulation of memory T cell differentiation // inferred from electronic annotation /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045629 // negative regulation of T-helper 2 cell differentiation // inferred from electronic annotation /// 0045749 // negative regulation of S phase of mitotic cell cycle // non-traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // non-traceable author statement /// 0048294 // negative regulation of isotype switching to IgE isotypes // inferred from electronic annotation /// 0048821 // erythrocyte development // inferred from electronic annotation /// 0050727 // regulation of inflammatory response // inferred from electronic annotation /// 0050776 // regulation of immune response // non-traceable author statement /// 0051272 // positive regulation of cellular component movement // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005657 // replication fork // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0031490 // chromatin DNA binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:187439164-187459050 (-) // 96.21 // q27.3"]
["11750146_a_at",0.25294685,0.006524086,0.12965393,-0.006524086,-0.019573212,-0.070613384,0.35104856,0.09315751,1.1187946,0.16194515,1.1187946,"up","TKTL1",8277,"0006007 // glucose catabolic process // traceable author statement /// 0006772 // thiamine metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004802 // transketolase activity // inferred from electronic annotation /// 0004802 // transketolase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:153524123-153558282 (+) // 99.75 // q28"]
["11715895_at",0.0018353462,-0.1201601,-0.105731964,0.6657615,0.1833849,-0.0018353462,0.4491428,0.15284133,-1.2808686,-0.35712254,1.2808686,"down","SCARB2",950,"0006622 // protein targeting to lysosome // inferred from mutant phenotype /// 0006622 // protein targeting to lysosome // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from sequence or structural similarity /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043202 // lysosomal lumen // inferred from sequence or structural similarity /// 0043202 // lysosomal lumen // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from electronic annotation","chr4:77079889-77135039 (-) // 89.53 // q21.1"]
["11750080_a_at",-0.075974464,-0.28495216,-0.24250793,0.22283936,0.075974464,0.09285641,0.13441831,0.013630961,-1.2584969,-0.33170164,1.2584969,"down","DDB2",1643,"0000209 // protein polyubiquitination // inferred from direct assay /// 0000718 // nucleotide-excision repair, DNA damage removal // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006290 // pyrimidine dimer repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0009411 // response to UV // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0051865 // protein autoubiquitination // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0043234 // protein complex // inferred from direct assay","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // traceable author statement /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr11:47236644-47260400 (+) // 99.09 // p11.2"]
["11737213_at",0.346601,0.09430981,-0.13686848,-0.16709661,0.050962448,-0.050962448,0.6742601,0.36315447,1.115002,0.15704635,1.115002,"up","C12orf61",283416,"","","","chr12:62995530-62997470 (-) // 89.38 // q14.1"]
["11748483_a_at",-0.2433126,0.08979821,0.1486466,0.098062515,-0.08979821,-0.14923501,0.91197515,0.76690567,1.0319461,0.045367565,1.0319461,"up","P2RX7",5027,"0000187 // activation of MAPK activity // inferred from electronic annotation /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001845 // phagolysosome assembly // inferred from electronic annotation /// 0001916 // positive regulation of T cell mediated cytotoxicity // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0002028 // regulation of sodium ion transport // inferred from sequence or structural similarity /// 0002028 // regulation of sodium ion transport // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006509 // membrane protein ectodomain proteolysis // inferred from electronic annotation /// 0006649 // phospholipid transfer to membrane // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006884 // cell volume homeostasis // inferred from electronic annotation /// 0006900 // membrane budding // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007005 // mitochondrion organization // inferred from electronic annotation /// 0007009 // plasma membrane organization // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from sequence or structural similarity /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009617 // response to bacterium // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010043 // response to zinc ion // inferred from electronic annotation /// 0010467 // gene expression // inferred from electronic annotation /// 0010524 // positive regulation of calcium ion transport into cytosol // inferred from direct assay /// 0014049 // positive regulation of glutamate secretion // inferred from electronic annotation /// 0014054 // positive regulation of gamma-aminobutyric acid secretion // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016079 // synaptic vesicle exocytosis // inferred from electronic annotation /// 0016485 // protein processing // inferred from electronic annotation /// 0019228 // regulation of action potential in neuron // inferred from electronic annotation /// 0019233 // sensory perception of pain // inferred from sequence or structural similarity /// 0019233 // sensory perception of pain // inferred from electronic annotation /// 0019835 // cytolysis // inferred from electronic annotation /// 0030501 // positive regulation of bone mineralization // inferred from sequence or structural similarity /// 0030501 // positive regulation of bone mineralization // inferred from electronic annotation /// 0031668 // cellular response to extracellular stimulus // inferred from electronic annotation /// 0032060 // bleb assembly // inferred from sequence or structural similarity /// 0032060 // bleb assembly // inferred from electronic annotation /// 0032308 // positive regulation of prostaglandin secretion // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032731 // positive regulation of interleukin-1 beta production // inferred from electronic annotation /// 0032755 // positive regulation of interleukin-6 production // inferred from electronic annotation /// 0032963 // collagen metabolic process // inferred from electronic annotation /// 0033198 // response to ATP // inferred from direct assay /// 0033198 // response to ATP // inferred from electronic annotation /// 0034405 // response to fluid shear stress // inferred from electronic annotation /// 0035590 // purinergic nucleotide receptor signaling pathway // inferred from direct assay /// 0035590 // purinergic nucleotide receptor signaling pathway // inferred from electronic annotation /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0042098 // T cell proliferation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from sequence or structural similarity /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043029 // T cell homeostasis // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // inferred from electronic annotation /// 0043132 // NAD transport // inferred from electronic annotation /// 0043409 // negative regulation of MAPK cascade // inferred from sequence or structural similarity /// 0043409 // negative regulation of MAPK cascade // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0044254 // multicellular organismal protein catabolic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045332 // phospholipid translocation // inferred from electronic annotation /// 0045778 // positive regulation of ossification // inferred from electronic annotation /// 0045779 // negative regulation of bone resorption // inferred from sequence or structural similarity /// 0045779 // negative regulation of bone resorption // inferred from electronic annotation /// 0045919 // positive regulation of cytolysis // inferred from sequence or structural similarity /// 0045919 // positive regulation of cytolysis // inferred from electronic annotation /// 0046513 // ceramide biosynthetic process // inferred from electronic annotation /// 0046931 // pore complex assembly // inferred from direct assay /// 0046931 // pore complex assembly // inferred from electronic annotation /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0048873 // homeostasis of number of cells within a tissue // inferred from electronic annotation /// 0050714 // positive regulation of protein secretion // inferred from electronic annotation /// 0050715 // positive regulation of cytokine secretion // inferred from electronic annotation /// 0050717 // positive regulation of interleukin-1 alpha secretion // inferred from electronic annotation /// 0050718 // positive regulation of interleukin-1 beta secretion // inferred from direct assay /// 0050718 // positive regulation of interleukin-1 beta secretion // inferred from electronic annotation /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation /// 0051209 // release of sequestered calcium ion into cytosol // inferred from electronic annotation /// 0051259 // protein oligomerization // inferred from electronic annotation /// 0051495 // positive regulation of cytoskeleton organization // inferred from sequence or structural similarity /// 0051495 // positive regulation of cytoskeleton organization // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from electronic annotation /// 0051602 // response to electrical stimulus // inferred from electronic annotation /// 0051709 // regulation of killing of cells of other organism // non-traceable author statement /// 0051899 // membrane depolarization // inferred from direct assay /// 0051899 // membrane depolarization // inferred from electronic annotation /// 0051901 // positive regulation of mitochondrial depolarization // inferred from electronic annotation /// 0072593 // reactive oxygen species metabolic process // inferred from electronic annotation","0005639 // integral to nuclear inner membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred by curator /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0032059 // bleb // inferred from sequence or structural similarity /// 0032059 // bleb // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043195 // terminal button // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation","0000287 // magnesium ion binding // inferred from electronic annotation /// 0001530 // lipopolysaccharide binding // inferred from sequence or structural similarity /// 0001530 // lipopolysaccharide binding // inferred from electronic annotation /// 0001614 // purinergic nucleotide receptor activity // inferred from direct assay /// 0001614 // purinergic nucleotide receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004931 // extracellular ATP-gated cation channel activity // inferred from direct assay /// 0004931 // extracellular ATP-gated cation channel activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from sequence or structural similarity /// 0005102 // receptor binding // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005507 // copper ion binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred by curator /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0015267 // channel activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // non-traceable author statement","chr12:121570682-121622605 (+) // 97.42 // q24.31"]
["11754111_s_at",-0.15603065,-0.20543575,-0.005467415,0.059532642,0.005467415,0.23663282,0.30945078,0.072872385,-1.1670413,-0.22285561,1.1670413,"down","PNOC",5368,"0007165 // signal transduction // traceable author statement /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007600 // sensory perception // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation","0001515 // opioid peptide activity // inferred from electronic annotation /// 0005184 // neuropeptide hormone activity // traceable author statement","chr8:28174801-28197003 (+) // 100.0 // p21.1"]
["11720167_at",-0.17215037,0.00017547607,0.022067308,-0.14024997,0.01727438,-0.0001757145,0.9699344,0.9156632,-1.0062011,-0.008918741,1.0062011,"down","SELL",6402,"0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0033198 // response to ATP // inferred from electronic annotation /// 0050776 // regulation of immune response // traceable author statement /// 0050900 // leukocyte migration // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0002020 // protease binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // traceable author statement /// 0030246 // carbohydrate binding // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0043208 // glycosphingolipid binding // traceable author statement /// 0050839 // cell adhesion molecule binding // inferred from electronic annotation","chr1:169659809-169680843 (-) // 97.84 // q24.2"]
["11743716_a_at",0.31739235,0.25991297,0.26010466,-0.25991297,-0.34246206,-0.3240013,0.014770908,4.8443915e-5,1.5030873,0.5879288,1.5030873,"up","BRWD1",54014,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0008360 // regulation of cell shape // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","","chr21:40557403-40685556 (-) // 99.26 // q22.2"]
["11719983_a_at",0.3142786,0.3049879,0.26055813,-0.26055813,-0.42374992,-0.548553,0.043581214,0.0011593424,1.6292732,0.7042285,1.6292732,"up","INPP5A",3632,"0007154 // cell communication // non-traceable author statement /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation","0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0004445 // inositol-polyphosphate 5-phosphatase activity // non-traceable author statement /// 0004445 // inositol-polyphosphate 5-phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042731 // PH domain binding // inferred from physical interaction /// 0052658 // inositol-1,4,5-trisphosphate 5-phosphatase activity // inferred from electronic annotation /// 0052659 // inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity // inferred from electronic annotation","chr10:134351334-134597211 (+) // 89.71 // q26.3"]
["11753289_s_at",0.16736627,-0.14959335,0.057442904,0.18828869,-0.10330629,-0.057443142,0.9672963,0.9084078,1.0110766,0.015892258,1.0110766,"up","LOC100506403 /// RUNX1","100506403 /// 861","0001501 // skeletal system development // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0002318 // myeloid progenitor cell differentiation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0009966 // regulation of signal transduction // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from direct assay /// 0030097 // hemopoiesis // traceable author statement /// 0030099 // myeloid cell differentiation // inferred from direct assay /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0030853 // negative regulation of granulocyte differentiation // inferred from mutant phenotype /// 0030854 // positive regulation of granulocyte differentiation // inferred from mutant phenotype /// 0030855 // epithelial cell differentiation // inferred from electronic annotation /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0035162 // embryonic hemopoiesis // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048266 // behavioral response to pain // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation /// 0048935 // peripheral nervous system neuron development // traceable author statement /// 0060216 // definitive hemopoiesis // inferred from electronic annotation /// 0071336 // regulation of hair follicle cell proliferation // inferred from electronic annotation /// 0071425 // hemopoietic stem cell proliferation // traceable author statement","0005604 // basement membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000975 // regulatory region DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0070491 // repressing transcription factor binding // inferred from electronic annotation","chr21:36206706-36259394 (-) // 69.17 // q22.12"]
["11746755_s_at",-0.04300785,0.04300785,0.12636614,-0.1465435,-0.17819309,0.49220037,0.98443776,0.9541244,-1.0095408,-0.013699212,1.0095408,"down","SLC28A3",64078,"0001895 // retina homeostasis // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0015860 // purine nucleoside transport // inferred from electronic annotation /// 0015864 // pyrimidine nucleoside transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0001882 // nucleoside binding // inferred from electronic annotation /// 0005415 // nucleoside:sodium symporter activity // inferred from electronic annotation /// 0015389 // pyrimidine- and adenine-specific:sodium symporter activity // inferred from electronic annotation /// 0015390 // purine-specific nucleoside:sodium symporter activity // inferred from electronic annotation","chr9:86892948-86955672 (-) // 98.76 // q21.32"]
["11746934_a_at",0.13070011,0.016195297,0.068968296,-0.08830261,-0.016195297,-0.07792616,0.19674987,0.02944377,1.0963912,0.13276266,1.0963912,"up","SPIRE1",56907,"0006810 // transport // inferred from electronic annotation /// 0048193 // Golgi vesicle transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation","chr18:12448630-12453113 (-) // 92.65 // p11.21"]
["11757250_x_at",-0.31026936,0.24578357,-0.046952486,0.11293459,-0.09196305,0.046952724,0.90289426,0.74505454,-1.0423123,-0.059787557,1.0423123,"down","INGX",27160,"","","","chrX:70711376-70712604 (-) // 75.0 // q13.1"]
["11753422_a_at",0.1513691,0.019747734,0.038487434,-0.019747734,-0.17961407,-0.27209568,0.2691523,0.05466053,1.1704153,0.2270205,1.1704153,"up","BNIP3L",665,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0008634 // negative regulation of survival gene product expression // inferred from direct assay /// 0035694 // mitochondrial protein catabolic process // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005740 // mitochondrial envelope // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from mutant phenotype /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031224 // intrinsic to membrane // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0005521 // lamin binding // inferred from direct assay /// 0005521 // lamin binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay","chr8:26240606-26268126 (+) // 99.78 // p21.2"]
["11760915_a_at",-0.36387944,-0.01578188,-0.16994834,0.22387958,0.015782118,0.047810078,0.3254656,0.08014907,-1.2133764,-0.27902716,1.2133764,"down","CYP3A5",1577,"0006805 // xenobiotic metabolic process // traceable author statement /// 0008202 // steroid metabolic process // traceable author statement /// 0009822 // alkaloid catabolic process // inferred from direct assay /// 0042737 // drug catabolic process // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070989 // oxidative demethylation // inferred from direct assay","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005792 // microsome // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0004497 // monooxygenase activity // inferred from sequence or structural similarity /// 0004497 // monooxygenase activity // inferred from electronic annotation /// 0004497 // monooxygenase activity // traceable author statement /// 0005506 // iron ion binding // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0016712 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen // inferred from electronic annotation /// 0019825 // oxygen binding // traceable author statement /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070330 // aromatase activity // inferred from electronic annotation","chr7:99270202-99277649 (-) // 39.33 // q22.1"]
["11745703_a_at",0.47431135,0.3483529,0.06687403,-0.3881564,-0.2314539,-0.06687355,0.18477026,0.025916917,1.4392734,0.5253406,1.4392734,"up","RCAN3",11123,"0009653 // anatomical structure morphogenesis // traceable author statement /// 0019722 // calcium-mediated signaling // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0031013 // troponin I binding // inferred from physical interaction","chr1:24840836-24861847 (+) // 100.0 // p36.11"]
["11734841_a_at",0.17626,0.12265587,0.0437603,-0.0437603,-0.15769958,-0.1692295,0.13038309,0.012828461,1.1791837,0.23778851,1.1791837,"up","RAD51",5888,"0000724 // double-strand break repair via homologous recombination // inferred from direct assay /// 0000724 // double-strand break repair via homologous recombination // inferred from electronic annotation /// 0000724 // double-strand break repair via homologous recombination // traceable author statement /// 0000730 // DNA recombinase assembly // traceable author statement /// 0006259 // DNA metabolic process // inferred from electronic annotation /// 0006268 // DNA unwinding involved in replication // inferred from direct assay /// 0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006302 // double-strand break repair // traceable author statement /// 0006310 // DNA recombination // traceable author statement /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006312 // mitotic recombination // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007126 // meiosis // inferred from electronic annotation /// 0007126 // meiosis // inferred from sequence or structural similarity /// 0007131 // reciprocal meiotic recombination // traceable author statement /// 0051106 // positive regulation of DNA ligation // inferred from direct assay /// 0051260 // protein homooligomerization // inferred from physical interaction","0000793 // condensed chromosome // inferred from sequence or structural similarity /// 0000794 // condensed nuclear chromosome // inferred from sequence or structural similarity /// 0000800 // lateral element // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0016605 // PML body // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from direct assay /// 0003697 // single-stranded DNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008094 // DNA-dependent ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0043142 // single-stranded DNA-dependent ATPase activity // inferred from direct assay","chr15:40987357-41024504 (+) // 87.94 // q15.1"]
["11716306_a_at",0.15122509,0.03654766,-0.03654766,0.08386707,-0.08770466,-0.070672035,0.69089663,0.385081,1.0535399,0.07524491,1.0535399,"up","ATXN10",25814,"0007399 // nervous system development // inferred from mutant phenotype /// 0008219 // cell death // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0030425 // dendrite // inferred from direct assay /// 0043025 // neuronal cell body // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from electronic annotation","chr22:46067682-46241189 (+) // 93.6 // q13.31"]
["11754933_s_at",-0.0395298,-0.037825584,0.003479004,0.14463806,0.1327858,-0.003479004,0.323722,0.07941823,-1.0836812,-0.11594044,1.0836812,"down","TSC22D2",9819,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006970 // response to osmotic stress // inferred from electronic annotation","","0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation","chr3:150128994-150177903 (+) // 96.11 // q25.1"]
["11758650_s_at",-0.015309334,0.11993027,0.108820915,-0.11337757,-0.039367676,0.015309334,0.3822719,0.11025094,1.0844468,0.11695926,1.0844468,"up","SNRPC",6631,"0000387 // spliceosomal snRNP assembly // inferred from direct assay /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005685 // U1 snRNP // inferred from direct assay /// 0005685 // U1 snRNP // inferred from electronic annotation /// 0015030 // Cajal body // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003727 // single-stranded RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0030619 // U1 snRNA binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:34741238-34741551 (+) // 100.0 // p21.31"]
["11745820_s_at",0.20945835,-0.12341118,-0.14423561,0.30834198,0.07658672,-0.07658672,0.76327574,0.48804483,-1.0883758,-0.12217679,1.0883758,"down","PLAGL1",5325,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0007050 // cell cycle arrest // traceable author statement /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:144261436-144329543 (-) // 94.31 // q24.2"]
["11750538_x_at",-0.0146045685,-0.08139992,-0.1047039,0.23996162,0.1307764,0.014603615,0.25775468,0.050173324,-1.1450019,-0.19534998,1.1450019,"down","TXN",7295,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006662 // glycerol ether metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006928 // cellular component movement // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0009314 // response to radiation // inferred from direct assay /// 0015949 // nucleobase-containing small molecule interconversion // traceable author statement /// 0022900 // electron transport chain // inferred from electronic annotation /// 0033158 // regulation of protein import into nucleus, translocation // inferred from direct assay /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0043388 // positive regulation of DNA binding // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 0046826 // negative regulation of protein export from nucleus // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0015035 // protein disulfide oxidoreductase activity // inferred from electronic annotation /// 0015037 // peptide disulfide oxidoreductase activity // inferred from electronic annotation","chr9:113006307-113018763 (-) // 90.28 // q31.3"]
["11724469_at",0.050091743,-0.06585884,-0.024062157,0.119953156,0.024062157,-0.07681084,0.840059,0.6182926,-1.0250384,-0.035677902,1.0250384,"down","SLU7",10569,"0000375 // RNA splicing, via transesterification reactions // inferred from direct assay /// 0000380 // alternative nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0000389 // nuclear mRNA 3'-splice site recognition // inferred from direct assay /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from direct assay /// 0008380 // RNA splicing // inferred from electronic annotation /// 0033554 // cellular response to stress // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0030532 // small nuclear ribonucleoprotein complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0000386 // second spliceosomal transesterification activity // inferred from direct assay /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0030628 // pre-mRNA 3'-splice site binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:159828653-159846407 (-) // 86.7 // q33.3"]
["11738586_at",-0.000831604,-0.18143082,0.000831604,-0.06951618,0.019397259,0.083397865,0.69815123,0.39392993,-1.0508596,-0.07156989,1.0508596,"down","HGC6.3",100128124,"","","","chr6:168376603-168377619 (-) // 85.77 // q27"]
["11715422_a_at",-0.07401466,0.1393547,0.049494743,-0.18149567,-0.049494743,0.0574522,0.67034143,0.3585197,1.0688981,0.0961243,1.0688981,"up","BCAP31",10134,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0006955 // immune response // non-traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0032471 // reduction of endoplasmic reticulum calcium ion concentration // inferred from mutant phenotype /// 0035584 // calcium-mediated signaling using intracellular calcium source // inferred from mutant phenotype /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0051561 // elevation of mitochondrial calcium ion concentration // inferred from mutant phenotype /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype","0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005811 // lipid particle // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation /// 0071556 // integral to lumenal side of endoplasmic reticulum membrane // traceable author statement","0004872 // receptor activity // inferred from electronic annotation /// 0005102 // receptor binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chrX:152965951-152989802 (-) // 56.42 // q28"]
["11727584_a_at",-0.3995881,-0.0019311905,-0.28181076,0.0019316673,0.28105927,0.3389306,0.258495,0.050505824,-1.3519894,-0.43508384,1.3519894,"down","SPIN3",169981,"0007276 // gamete generation // inferred from electronic annotation","","","chrX:57017263-57021987 (-) // 90.02 // p11.21"]
["11759521_a_at",-0.047984123,-0.057035446,-0.0012359619,0.0048036575,0.04871559,0.0012359619,0.32592958,0.080527276,-1.037902,-0.053670224,1.037902,"down","SBNO1",55206,"","","","chr12:123778194-123849756 (-) // 96.01 // q24.31"]
["11743383_at",-0.20726776,-0.06827307,0.005135536,-0.005135536,0.15688086,0.24121332,0.3276452,0.08136241,-1.1656392,-0.22112125,1.1656392,"down","PRPF40A",55660,"0006397 // mRNA processing // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from mutant phenotype /// 0008380 // RNA splicing // inferred from electronic annotation /// 0016477 // cell migration // inferred from mutant phenotype /// 0032465 // regulation of cytokinesis // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016363 // nuclear matrix // inferred from direct assay /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr2:153508103-153574511 (-) // 95.18 // q23.3"]
["11746460_a_at",-0.016795635,0.06381154,0.016795635,-0.084284306,0.23487544,-0.21649218,0.9117688,0.76644325,1.0304236,0.043237597,1.0304236,"up","ZNF711",7552,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:84498996-84527248 (+) // 98.19 // q21.1"]
["11759209_at",-0.062245846,0.13432074,0.064329624,0.062245846,-0.06697416,-0.19111395,0.6197084,0.29978606,1.0797887,0.110749,1.0797887,"up","AKD1",221264,"0006139 // nucleobase-containing compound metabolic process // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0019205 // nucleobase-containing compound kinase activity // inferred from electronic annotation","chr6:109870886-110012415 (-) // 89.82 // q21"]
["11760920_x_at",0.17895174,-0.05195999,-0.051150322,0.041659832,-0.0045075417,0.0045075417,0.9615908,0.8910997,1.0079288,0.011393799,1.0079288,"up","PHKG2",5261,"0005975 // carbohydrate metabolic process // traceable author statement /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005977 // glycogen metabolic process // traceable author statement /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0005978 // glycogen biosynthetic process // inferred from electronic annotation /// 0005980 // glycogen catabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006091 // generation of precursor metabolites and energy // traceable author statement /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045819 // positive regulation of glycogen catabolic process // traceable author statement","0005625 // soluble fraction // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005964 // phosphorylase kinase complex // traceable author statement /// 0005964 // phosphorylase kinase complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // non-traceable author statement /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004689 // phosphorylase kinase activity // traceable author statement /// 0004689 // phosphorylase kinase activity // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0050321 // tau-protein kinase activity // traceable author statement /// 0050321 // tau-protein kinase activity // inferred from electronic annotation","chr16:30759590-30771712 (+) // 94.93 // p11.2"]
["11742899_a_at",0.18278122,0.12659645,0.18366432,-0.12659645,-0.24849224,-0.15200138,0.04441424,0.0012255615,1.2657952,0.34004402,1.2657952,"up","CGGBP1",8545,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // traceable author statement","chr3:88101094-88108218 (-) // 96.05 // p11.1"]
["11762554_at",0.056133747,0.19172049,-0.08626604,-0.2604289,-0.056133747,0.428401,0.98039234,0.9433945,1.0115609,0.016583202,1.0115609,"up","CPAMD8",27151,"0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004866 // endopeptidase inhibitor activity // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr19:17068361-17137625 (-) // 93.17 // p13.11"]
["11717906_s_at",0.13516617,0.02273941,-0.0060138702,0.0060138702,-0.035874367,-0.05686474,0.46575546,0.16495182,1.0566803,0.07953898,1.0566803,"up","STAU1",6780,"0008298 // intracellular mRNA localization // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005791 // rough endoplasmic reticulum // inferred from electronic annotation /// 0005791 // rough endoplasmic reticulum // traceable author statement /// 0005875 // microtubule associated complex // traceable author statement /// 0010494 // cytoplasmic stress granule // inferred from sequence or structural similarity /// 0010494 // cytoplasmic stress granule // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr20:47729875-47804907 (-) // 95.73 // q13.13"]
["11749926_a_at",-0.17854905,-0.023694515,0.023694515,-0.14661717,0.023694515,0.10074425,0.8370525,0.6132702,-1.0367899,-0.05212356,1.0367899,"down","C4A /// C4B /// LOC100293534","100293534 /// 720 /// 721","0006954 // inflammatory response // inferred from electronic annotation /// 0006956 // complement activation // inferred from electronic annotation /// 0006956 // complement activation // traceable author statement /// 0006958 // complement activation, classical pathway // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation /// 0030449 // regulation of complement activation // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement","0004866 // endopeptidase inhibitor activity // inferred from electronic annotation","chr6:31949851-31952468 (+) // 97.88 // p21.33 /// chr6:31982589-31985206 (+) // 97.88 // p21.33"]
["11735951_at",0.06863308,-0.06863308,0.10232258,-0.2829523,0.09075689,-0.077908516,0.67090863,0.35946208,1.0898595,0.12414214,1.0898595,"up","SSTR4",6754,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007187 // G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0038170 // somatostatin signaling pathway // traceable author statement /// 0038170 // somatostatin signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004994 // somatostatin receptor activity // inferred from electronic annotation /// 0004994 // somatostatin receptor activity // traceable author statement","chr20:23016056-23017314 (+) // 97.54 // p11.21"]
["11728198_at",0.14658546,-0.080210686,0.012069702,-0.4091921,-0.012069702,0.059109688,0.7097249,0.41029295,1.1071614,0.14686555,1.1071614,"up","ALG1",56052,"0006486 // protein glycosylation // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0009103 // lipopolysaccharide biosynthetic process // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000030 // mannosyltransferase activity // traceable author statement /// 0004578 // chitobiosyldiphosphodolichol beta-mannosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr16:5121809-5137378 (+) // 71.93 // p13.3"]
["11734897_a_at",-0.12125635,0.1808567,0.23577833,-0.13812375,-0.23678923,0.12125635,0.62028867,0.30045605,1.1352514,0.18301181,1.1352514,"up","MATN1",4146,"0002062 // chondrocyte differentiation // inferred from electronic annotation /// 0003429 // growth plate cartilage chondrocyte morphogenesis // inferred from electronic annotation /// 0006461 // protein complex assembly // traceable author statement /// 0030500 // regulation of bone mineralization // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // traceable author statement","0005201 // extracellular matrix structural constituent // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr1:31184125-31196434 (-) // 92.14 // p35.2"]
["11719916_at",-0.27936935,-0.07508564,0.040538788,0.06296873,-0.040539265,0.15065718,0.52329654,0.20938,-1.1190964,-0.16233431,1.1190964,"down","IL1B",3553,"0000165 // MAPK cascade // inferred from mutant phenotype /// 0000187 // activation of MAPK activity // inferred from direct assay /// 0001660 // fever generation // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0001934 // positive regulation of protein phosphorylation // non-traceable author statement /// 0002439 // chronic inflammatory response to antigenic stimulus // inferred from electronic annotation /// 0002711 // positive regulation of T cell mediated immunity // inferred by curator /// 0006915 // apoptotic process // traceable author statement /// 0006916 // anti-apoptosis // inferred from direct assay /// 0006954 // inflammatory response // inferred from direct assay /// 0006954 // inflammatory response // non-traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0007566 // embryo implantation // traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0007611 // learning or memory // inferred from electronic annotation /// 0007613 // memory // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0009408 // response to heat // inferred from electronic annotation /// 0010193 // response to ozone // inferred from electronic annotation /// 0010243 // response to organic nitrogen // inferred from electronic annotation /// 0010332 // response to gamma radiation // inferred from electronic annotation /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from direct assay /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from sequence or structural similarity /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010829 // negative regulation of glucose transport // inferred from sequence or structural similarity /// 0010829 // negative regulation of glucose transport // inferred from electronic annotation /// 0014050 // negative regulation of glutamate secretion // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014805 // smooth muscle adaptation // non-traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from direct assay /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0030213 // hyaluronan biosynthetic process // inferred from direct assay /// 0030593 // neutrophil chemotaxis // inferred from electronic annotation /// 0030728 // ovulation // inferred from electronic annotation /// 0030730 // sequestering of triglyceride // inferred from direct assay /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // inferred by curator /// 0031622 // positive regulation of fever generation // inferred from sequence or structural similarity /// 0031622 // positive regulation of fever generation // inferred from electronic annotation /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from direct assay /// 0032308 // positive regulation of prostaglandin secretion // inferred from sequence or structural similarity /// 0032308 // positive regulation of prostaglandin secretion // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032725 // positive regulation of granulocyte macrophage colony-stimulating factor production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from direct assay /// 0032755 // positive regulation of interleukin-6 production // traceable author statement /// 0032755 // positive regulation of interleukin-6 production // inferred from electronic annotation /// 0032755 // positive regulation of interleukin-6 production // inferred from direct assay /// 0032757 // positive regulation of interleukin-8 production // inferred from direct assay /// 0032874 // positive regulation of stress-activated MAPK cascade // inferred from electronic annotation /// 0033129 // positive regulation of histone phosphorylation // non-traceable author statement /// 0033198 // response to ATP // inferred from electronic annotation /// 0033280 // response to vitamin D // inferred from electronic annotation /// 0033591 // response to L-ascorbic acid // inferred from electronic annotation /// 0034116 // positive regulation of heterotypic cell-cell adhesion // inferred from direct assay /// 0034116 // positive regulation of heterotypic cell-cell adhesion // non-traceable author statement /// 0035066 // positive regulation of histone acetylation // non-traceable author statement /// 0035176 // social behavior // inferred from electronic annotation /// 0035505 // positive regulation of myosin light chain kinase activity // inferred from direct assay /// 0035690 // cellular response to drug // inferred from direct assay /// 0042060 // wound healing // inferred from electronic annotation /// 0042102 // positive regulation of T cell proliferation // inferred from direct assay /// 0042221 // response to chemical stimulus // inferred from electronic annotation /// 0042346 // positive regulation of NF-kappaB import into nucleus // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043122 // regulation of I-kappaB kinase/NF-kappaB cascade // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0043278 // response to morphine // inferred from electronic annotation /// 0043407 // negative regulation of MAP kinase activity // inferred from sequence or structural similarity /// 0043407 // negative regulation of MAP kinase activity // inferred from electronic annotation /// 0043491 // protein kinase B signaling cascade // inferred from mutant phenotype /// 0043507 // positive regulation of JUN kinase activity // inferred from electronic annotation /// 0045080 // positive regulation of chemokine biosynthetic process // inferred from electronic annotation /// 0045086 // positive regulation of interleukin-2 biosynthetic process // inferred from mutant phenotype /// 0045410 // positive regulation of interleukin-6 biosynthetic process // inferred from electronic annotation /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from sequence or structural similarity /// 0045766 // positive regulation of angiogenesis // inferred from electronic annotation /// 0045833 // negative regulation of lipid metabolic process // inferred from sequence or structural similarity /// 0045833 // negative regulation of lipid metabolic process // inferred from electronic annotation /// 0045840 // positive regulation of mitosis // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046330 // positive regulation of JNK cascade // inferred from electronic annotation /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from electronic annotation /// 0046827 // positive regulation of protein export from nucleus // non-traceable author statement /// 0050796 // regulation of insulin secretion // inferred from direct assay /// 0050900 // leukocyte migration // inferred from electronic annotation /// 0050995 // negative regulation of lipid catabolic process // inferred from direct assay /// 0050996 // positive regulation of lipid catabolic process // inferred from sequence or structural similarity /// 0050996 // positive regulation of lipid catabolic process // inferred from electronic annotation /// 0051044 // positive regulation of membrane protein ectodomain proteolysis // inferred from direct assay /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0060355 // positive regulation of cell adhesion molecule production // non-traceable author statement /// 0060559 // positive regulation of calcidiol 1-monooxygenase activity // inferred from direct assay /// 0070164 // negative regulation of adiponectin secretion // inferred from sequence or structural similarity /// 0070164 // negative regulation of adiponectin secretion // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from electronic annotation /// 0070487 // monocyte aggregation // inferred from direct assay /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern /// 0071310 // cellular response to organic substance // inferred from direct assay /// 0071407 // cellular response to organic cyclic compound // inferred from direct assay /// 0071639 // positive regulation of monocyte chemotactic protein-1 production // inferred from direct assay","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from mutant phenotype /// 0005615 // extracellular space // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0030141 // secretory granule // inferred from electronic annotation /// 0031982 // vesicle // inferred from electronic annotation","0005125 // cytokine activity // inferred from direct assay /// 0005125 // cytokine activity // inferred from mutant phenotype /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005149 // interleukin-1 receptor binding // non-traceable author statement /// 0005149 // interleukin-1 receptor binding // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction","chr2:113587327-113594358 (-) // 94.91 // q13"]
["11749120_a_at",-0.16795659,0.117186785,0.22922516,-0.21966147,-0.117186785,0.23318315,0.8470902,0.6308651,1.067355,0.09404014,1.067355,"up","SCUBE2",57758,"","0005576 // extracellular region // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr11:9042121-9113093 (-) // 96.33 // p15.4"]
["11736867_x_at",0.1519239,-0.019781351,-0.094946146,-0.14677,0.061041594,0.019781351,0.90063274,0.74042326,1.0241175,0.034381207,1.0241175,"up","MMP16",4325,"0006508 // proteolysis // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030574 // collagen catabolic process // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005796 // Golgi lumen // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008047 // enzyme activator activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:89049461-89339717 (-) // 98.65 // q21.3"]
["11748194_a_at",0.15868855,0.24158573,-0.21922874,0.13191366,-0.13191366,-0.26827526,0.7457692,0.4616688,1.1093954,0.14977363,1.1093954,"up","POLL",27343,"0006260 // DNA replication // non-traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006289 // nucleotide-excision repair // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0016446 // somatic hypermutation of immunoglobulin genes // non-traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003887 // DNA-directed DNA polymerase activity // inferred from electronic annotation /// 0003887 // DNA-directed DNA polymerase activity // non-traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:103342749-103347916 (-) // 92.49 // q24.32"]
["11723018_at",0.17837334,-0.005309105,-0.046854973,-0.22231674,0.005309105,0.02323246,0.6775625,0.36734736,1.0767337,0.10666149,1.0767337,"up","LCMT2",9836,"0008033 // tRNA processing // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation","","0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr15:43619973-43622891 (-) // 87.55 // q15.3"]
["11751273_a_at",-0.16865158,-0.062246323,0.00045394897,0.01910925,0.020737171,-0.00045394897,0.43854815,0.14534815,-1.06433,-0.08994551,1.06433,"down","GPR34",2857,"0006886 // intracellular protein transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0035589 // G-protein coupled purinergic nucleotide receptor signaling pathway // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0045028 // G-protein coupled purinergic nucleotide receptor activity // inferred from electronic annotation","chrX:41548250-41556032 (+) // 90.89 // p11.4"]
["11763524_a_at",0.109945774,-0.022454739,-0.14623928,-0.20965195,0.030180931,0.022454262,0.9155485,0.7767751,1.0229646,0.032756217,1.0229646,"up","PPARA",5465,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006629 // lipid metabolic process // traceable author statement /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0008544 // epidermis development // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010745 // negative regulation of macrophage derived foam cell differentiation // inferred by curator /// 0010745 // negative regulation of macrophage derived foam cell differentiation // inferred from direct assay /// 0010871 // negative regulation of receptor biosynthetic process // inferred from direct assay /// 0010887 // negative regulation of cholesterol storage // inferred from direct assay /// 0010891 // negative regulation of sequestering of triglyceride // inferred from direct assay /// 0015908 // fatty acid transport // traceable author statement /// 0019217 // regulation of fatty acid metabolic process // inferred from electronic annotation /// 0030522 // intracellular receptor mediated signaling pathway // inferred from direct assay /// 0030522 // intracellular receptor mediated signaling pathway // inferred from electronic annotation /// 0032000 // positive regulation of fatty acid beta-oxidation // traceable author statement /// 0032099 // negative regulation of appetite // inferred from sequence or structural similarity /// 0032099 // negative regulation of appetite // inferred from electronic annotation /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation /// 0042157 // lipoprotein metabolic process // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // inferred from direct assay /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045776 // negative regulation of blood pressure // inferred from electronic annotation /// 0045820 // negative regulation of glycolysis // inferred by curator /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046321 // positive regulation of fatty acid oxidation // inferred from sequence or structural similarity /// 0046321 // positive regulation of fatty acid oxidation // inferred from electronic annotation /// 0072363 // regulation of glycolysis by positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0072366 // regulation of cellular ketone metabolic process by positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0072369 // regulation of lipid transport by positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0001103 // RNA polymerase II repressing transcription factor binding // inferred from physical interaction /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from direct assay /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008144 // drug binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from direct assay /// 0008289 // lipid binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0031624 // ubiquitin conjugating enzyme binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from sequence or structural similarity /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070215 // MDM2 binding // inferred from electronic annotation","chr22:46567042-46611227 (+) // 58.32 // q13.31"]
["11759314_at",0.0337677,-0.019791126,0.019791126,-0.1923685,0.06331682,-0.046197414,0.7094357,0.40990788,1.0494783,0.069672324,1.0494783,"up","CRHR2",1395,"0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // traceable author statement /// 0071376 // cellular response to corticotropin-releasing hormone stimulus // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015056 // corticotrophin-releasing factor receptor activity // traceable author statement","chr7:30691830-30722314 (-) // 96.93 // p14.3"]
["11746308_a_at",0.11787224,-0.0029697418,0.0029697418,0.057070732,-0.034035206,-0.011695862,0.77172124,0.49998128,1.0249196,0.035510782,1.0249196,"up","LINC00494",284749,"","","","chr20:46993631-46999381 (+) // 68.2 // q13.13"]
["11756679_a_at",-0.02046585,-0.27248764,-0.15707302,0.35299683,0.09445953,0.02046585,0.30283222,0.06966125,-1.2362607,-0.30598295,1.2362607,"down","ALDH3A2",224,"0006081 // cellular aldehyde metabolic process // inferred from direct assay /// 0006081 // cellular aldehyde metabolic process // non-traceable author statement /// 0006081 // cellular aldehyde metabolic process // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from mutant phenotype /// 0007422 // peripheral nervous system development // inferred from mutant phenotype /// 0008152 // metabolic process // inferred from electronic annotation /// 0008544 // epidermis development // inferred from mutant phenotype /// 0033306 // phytol metabolic process // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004029 // aldehyde dehydrogenase (NAD) activity // inferred from direct assay /// 0004029 // aldehyde dehydrogenase (NAD) activity // inferred from mutant phenotype /// 0004029 // aldehyde dehydrogenase (NAD) activity // inferred from electronic annotation /// 0004030 // aldehyde dehydrogenase [NAD(P)+] activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016620 // oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor // inferred from electronic annotation","chr17:19559457-19579055 (+) // 89.71 // p11.2"]
["11763695_a_at",-0.19322395,0.01853609,-0.06406975,-0.016914368,0.152143,0.016914845,0.48617202,0.18041366,-1.0945215,-0.13030033,1.0945215,"down","ABTB1",80325,"0006412 // translation // inferred from electronic annotation /// 0006414 // translational elongation // inferred from electronic annotation","0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0003746 // translation elongation factor activity // inferred from electronic annotation","chr3:127391808-127399766 (+) // 97.99 // q21.3"]
["11741065_a_at",0.08013916,0.26171637,0.083073616,-0.08694124,-0.14838505,-0.08013916,0.15424228,0.018061167,1.1865708,0.24679814,1.1865708,"up","EPHX1",2052,"0001889 // liver development // inferred from electronic annotation /// 0006725 // cellular aromatic compound metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009636 // response to toxin // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0019439 // aromatic compound catabolic process // inferred from electronic annotation /// 0071310 // cellular response to organic substance // inferred from electronic annotation /// 0071385 // cellular response to glucocorticoid stimulus // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004301 // epoxide hydrolase activity // inferred from electronic annotation /// 0004301 // epoxide hydrolase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0033961 // cis-stilbene-oxide hydrolase activity // inferred from electronic annotation","chr1:225997793-226033260 (+) // 98.11 // q42.12"]
["11742427_s_at",-0.35447836,-0.050489426,0.050489426,-0.09895325,0.07617617,0.27630377,0.6018778,0.28158802,-1.1508249,-0.20266834,1.1508249,"down","STRC",161497,"0007605 // sensory perception of sound // inferred from electronic annotation /// 0050910 // detection of mechanical stimulus involved in sensory perception of sound // inferred from electronic annotation /// 0060088 // auditory receptor cell stereocilium organization // inferred from electronic annotation /// 0060088 // auditory receptor cell stereocilium organization // inferred from sequence or structural similarity","0009986 // cell surface // inferred from electronic annotation /// 0032426 // stereocilium bundle tip // inferred from electronic annotation /// 0032426 // stereocilium bundle tip // inferred from sequence or structural similarity /// 0060091 // kinocilium // inferred from sequence or structural similarity","","chr15:43891760-43910998 (-) // 98.84 // q15.3 /// chr15:43991576-44010460 (-) // 98.4 // q15.3"]
["11747511_x_at",-0.169343,0.016501904,-0.014930248,-0.10419655,0.104923725,0.014930248,0.7746195,0.5044346,-1.0432919,-0.0611429,1.0432919,"down","HLA-DQB1",3119,"0002381 // immunoglobulin production involved in immunoglobulin mediated immune response // inferred from direct assay /// 0002455 // humoral immune response mediated by circulating immunoglobulin // inferred from direct assay /// 0002504 // antigen processing and presentation of peptide or polysaccharide antigen via MHC class II // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0031295 // T cell costimulation // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042613 // MHC class II protein complex // inferred from electronic annotation","0032395 // MHC class II receptor activity // non-traceable author statement","chr6:32628844-32634472 (-) // 88.93 // p21.32"]
["11736145_a_at",0.36511183,0.036405563,-0.036405563,0.13330269,-0.18921089,-0.3152032,0.56793267,0.24861643,1.1854278,0.24540778,1.1854278,"up","SPATA20",64847,"0006013 // mannose metabolic process // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004476 // mannose-6-phosphate isomerase activity // inferred from electronic annotation","chr17:48624449-48633211 (+) // 96.91 // q21.33"]
["11716111_x_at",-0.23463988,0.01648736,0.056684494,-0.096408606,0.0027811527,-0.0027811527,0.93983835,0.83347744,-1.0151454,-0.02168641,1.0151454,"down","PIGR",5284,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:207101863-207119811 (-) // 79.88 // q32.1"]
["11741641_a_at",-0.06444836,0.18142557,-0.15332747,-0.22711754,0.08304405,0.06444883,0.97312564,0.9238734,1.0100486,0.0144247515,1.0100486,"up","ZFX",7543,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003713 // transcription coactivator activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:24167152-24232628 (+) // 91.12 // p22.11"]
["11752497_a_at",0.102378845,-0.07061386,-0.09492874,0.39426517,0.07061386,-0.0810976,0.69167805,0.3862508,-1.1087866,-0.1489817,1.1087866,"down","MEF2D",4209,"0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001958 // endochondral ossification // inferred from electronic annotation /// 0002062 // chondrocyte differentiation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007512 // adult heart development // inferred from expression pattern /// 0007517 // muscle organ development // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from direct assay /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from electronic annotation /// 0033613 // activating transcription factor binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr1:156436007-156470545 (-) // 92.49 // q22"]
["11742429_x_at",-0.01646185,0.008675337,-0.2502246,-0.008675337,0.14931273,0.13979173,0.42722896,0.1379726,-1.1324757,-0.17948014,1.1324757,"down","ZNF716",441234,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:57509882-57533265 (+) // 73.13 // p11.2"]
["11746471_s_at",0.46036673,-0.14728928,-0.053489685,0.31322002,0.053489685,-0.16763878,0.9773879,0.9355776,1.0140805,0.020172216,1.0140805,"up","MAP4K4",9448,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006950 // response to stress // inferred from direct assay /// 0007243 // intracellular protein kinase cascade // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0046328 // regulation of JNK cascade // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005083 // small GTPase regulator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr2:102413695-102508449 (+) // 95.66 // q11.2"]
["11721410_s_at",-0.11806011,-0.011528015,-0.25016832,0.17358589,0.011528015,0.2852559,0.2687745,0.05452757,-1.217039,-0.28337538,1.217039,"down","STK16",8576,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005798 // Golgi-associated vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr2:220110200-220115174 (+) // 99.32 // q35"]
["11729078_a_at",0.19359922,0.22251987,-0.053655624,-0.10407567,-0.12923694,0.053655624,0.45768854,0.15934548,1.1334391,0.18070683,1.1334391,"up","SLC26A7",115111,"0001696 // gastric acid secretion // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006820 // anion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from direct assay /// 0006821 // chloride transport // inferred from electronic annotation /// 0008272 // sulfate transport // inferred from direct assay /// 0008272 // sulfate transport // inferred from electronic annotation /// 0015701 // bicarbonate transport // inferred from sequence or structural similarity /// 0015701 // bicarbonate transport // inferred from electronic annotation /// 0019532 // oxalate transport // inferred from direct assay /// 0055085 // transmembrane transport // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from mutant phenotype /// 0016323 // basolateral plasma membrane // inferred from sequence or structural similarity /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from electronic annotation","0005253 // anion channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from direct assay /// 0005254 // chloride channel activity // inferred from electronic annotation /// 0015106 // bicarbonate transmembrane transporter activity // inferred from sequence or structural similarity /// 0015106 // bicarbonate transmembrane transporter activity // inferred from electronic annotation /// 0015116 // sulfate transmembrane transporter activity // inferred from direct assay /// 0015116 // sulfate transmembrane transporter activity // inferred from electronic annotation /// 0015301 // anion:anion antiporter activity // inferred from electronic annotation /// 0019531 // oxalate transmembrane transporter activity // inferred from direct assay","chr8:92261515-92410383 (+) // 98.58 // q21.3"]
["11726480_at",-0.09479475,-0.09158945,0.20869207,-0.11854124,0.09158945,0.24869585,0.86906993,0.6733865,-1.0471576,-0.06647865,1.0471576,"down","FATE1",89885,"","0005783 // endoplasmic reticulum // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chrX:150884507-150891666 (+) // 92.97 // q28"]
["11731581_a_at",-0.004790783,-0.0688529,0.020005703,0.24707699,0.004790306,-0.28033924,0.98604596,0.9593561,-1.0058315,-0.0083886115,1.0058315,"down","WASF1",8936,"0006461 // protein complex assembly // non-traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0030041 // actin filament polymerization // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0030027 // lamellipodium // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation","chr6:110421021-110501207 (-) // 99.66 // q21"]
["11716458_a_at",-0.061231613,-0.17051506,-0.11199856,0.110012054,0.076685905,0.061231613,0.08115887,0.0047305273,-1.1464909,-0.19722494,1.1464909,"down","MRPS35",60488,"0042769 // DNA damage response, detection of DNA damage // non-traceable author statement /// 0043043 // peptide biosynthetic process // inferred by curator","0005739 // mitochondrion // inferred from electronic annotation /// 0005763 // mitochondrial small ribosomal subunit // inferred from sequence or structural similarity /// 0005763 // mitochondrial small ribosomal subunit // non-traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","","chr12:27863715-27909228 (+) // 86.29 // p11.22"]
["11757069_s_at",0.011267662,-0.12657547,-0.092544556,0.23889542,0.107676506,-0.011267662,0.3549444,0.095420726,-1.1337104,-0.18105213,1.1337104,"down","LOC100506562",100506562,"","","","chr2:222808882-222809530 (+) // 96.23 // q36.1 /// chr22:42072546-42073161 (-) // 90.95 // q13.2"]
["11731421_a_at",-0.21293163,-0.1061306,-0.20268917,0.16132832,0.1061306,0.1564827,0.044074457,0.0011912405,-1.2442108,-0.31523097,1.2442108,"down","UBE2G2",7327,"0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030433 // ER-associated protein catabolic process // inferred from electronic annotation /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation","chr21:46188494-46222170 (-) // 81.22 // q22.3"]
["11731066_x_at",0.057485342,0.22096682,-0.057485342,-0.1341517,-0.07285094,0.24498701,0.87709075,0.6908626,1.0431844,0.0609942,1.0431844,"up","GIMAP1",170575,"0030183 // B cell differentiation // inferred from electronic annotation /// 0030217 // T cell differentiation // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr7:150413644-150418881 (+) // 86.42 // q36.1"]
["11738896_a_at",-0.2938652,-0.058199883,0.042253017,-0.042253017,0.15220356,0.21560907,0.47040087,0.16875552,-1.1581247,-0.21179058,1.1581247,"down","CD200R1L",344807,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr3:112538618-112564797 (-) // 79.4 // q13.2"]
["11729057_at",0.02823639,-0.33245492,-0.10883355,0.348835,0.02823639,-0.028236628,0.48879698,0.1823643,-1.1924777,-0.25396228,1.1924777,"down","C19orf69",100170765,"","","","chr19:41949062-41950673 (+) // 70.1 // q13.2"]
["11754026_a_at",-0.18364811,-0.2679844,-0.4691801,0.51528597,0.31911945,0.18364763,0.09997388,0.0072802114,-1.5651366,-0.6462885,1.5651366,"down","IL8",3576,"0001525 // angiogenesis // traceable author statement /// 0002237 // response to molecule of bacterial origin // inferred from direct assay /// 0006928 // cellular component movement // traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0019722 // calcium-mediated signaling // traceable author statement /// 0030155 // regulation of cell adhesion // inferred from direct assay /// 0030593 // neutrophil chemotaxis // inferred from genetic interaction /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0031623 // receptor internalization // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0042119 // neutrophil activation // traceable author statement /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from expression pattern /// 0045091 // regulation of retroviral genome replication // inferred from direct assay /// 0045744 // negative regulation of G-protein coupled receptor protein signaling pathway // inferred from direct assay /// 0048566 // embryonic digestive tract development // inferred from expression pattern /// 0050930 // induction of positive chemotaxis // inferred from genetic interaction /// 0071222 // cellular response to lipopolysaccharide // inferred from direct assay /// 0071347 // cellular response to interleukin-1 // inferred from expression pattern /// 0071356 // cellular response to tumor necrosis factor // inferred from expression pattern /// 0090023 // positive regulation of neutrophil chemotaxis // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005622 // intracellular // inferred from direct assay","0005125 // cytokine activity // inferred from electronic annotation /// 0005153 // interleukin-8 receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008009 // chemokine activity // inferred from electronic annotation /// 0008009 // chemokine activity // traceable author statement","chr4:74606280-74608177 (+) // 70.26 // q13.3"]
["11745068_a_at",-0.094818115,0.17208862,0.20659065,-0.15979052,-0.05908203,0.05908203,0.58560646,0.26548678,1.1079432,0.14788389,1.1079432,"up","ZNF833P",401898,"","0005622 // intracellular // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:11750590-11797382 (+) // 70.58 // p13.2"]
["11743790_a_at",0.13032389,-0.10319376,0.13180733,0.1011157,-0.17023563,-0.1011157,0.69142467,0.38580072,1.079022,0.10972434,1.079022,"up","FRS2",10818,"0000186 // activation of MAPKK activity // traceable author statement /// 0000187 // activation of MAPK activity // inferred from electronic annotation /// 0001702 // gastrulation with mouth forming second // inferred from electronic annotation /// 0001759 // organ induction // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007185 // transmembrane receptor protein tyrosine phosphatase signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007405 // neuroblast proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from genetic interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0008595 // anterior/posterior axis specification, embryo // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0046619 // optic placode formation involved in camera-type eye formation // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050678 // regulation of epithelial cell proliferation // inferred from electronic annotation /// 0060527 // prostate epithelial cord arborization involved in prostate glandular acinus morphogenesis // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005068 // transmembrane receptor protein tyrosine kinase adaptor activity // traceable author statement /// 0005068 // transmembrane receptor protein tyrosine kinase adaptor activity // inferred from electronic annotation /// 0005104 // fibroblast growth factor receptor binding // inferred from physical interaction /// 0005158 // insulin receptor binding // inferred from electronic annotation /// 0005168 // neurotrophin TRKA receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0019211 // phosphatase activator activity // traceable author statement","chr12:69864128-69973573 (+) // 98.22 // q15"]
["11720383_a_at",0.029420853,0.028740883,0.04194355,-0.048169136,-0.06708908,-0.028740883,0.060012247,0.0023733838,1.058021,0.08136819,1.058021,"up","STX6",10228,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006906 // vesicle fusion // inferred from physical interaction /// 0007032 // endosome organization // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0042147 // retrograde transport, endosome to Golgi // inferred from mutant phenotype /// 0048193 // Golgi vesicle transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // traceable author statement /// 0032588 // trans-Golgi network membrane // inferred from sequence or structural similarity /// 0032588 // trans-Golgi network membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005484 // SNAP receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:180941851-180992257 (-) // 97.46 // q25.3"]
["11753303_a_at",0.09097195,-0.00024318695,-0.0054707527,0.00024318695,-0.23748064,0.030389786,0.6571992,0.34166893,1.0698204,0.09736862,1.0698204,"up","TMEM63A",9725,"","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation","chr1:226048423-226054434 (-) // 97.25 // q42.12"]
["11747954_x_at",0.12633038,-0.085404396,-0.21469831,0.11609745,0.01515007,-0.015149593,0.71512985,0.41768256,-1.069268,-0.09662347,1.069268,"down","PYROXD1",79912,"0055114 // oxidation-reduction process // inferred from electronic annotation","","0016491 // oxidoreductase activity // inferred from electronic annotation","chr12:21590528-21621704 (+) // 95.89 // p12.1 /// chr11:106697101-106698748 (-) // 97.22 // q22.3"]
["11746234_a_at",0.19844913,0.21556759,0.047393322,-0.07384205,-0.047393322,-0.3097887,0.22877915,0.039818086,1.2289941,0.29747802,1.2289941,"up","ZFP106",64397,"0008286 // insulin receptor signaling pathway // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0001515 // opioid peptide activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:42707320-42783397 (-) // 75.26 // q15.1"]
["11745038_s_at",0.16224384,0.1181469,-0.0009899139,0.0009899139,-0.059948444,-0.19301748,0.32099512,0.07810589,1.130629,0.17712553,1.130629,"up","FRAT1",10023,"0016055 // Wnt receptor signaling pathway // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","","chr10:99079021-99081580 (+) // 93.94 // q24.1"]
["11720283_at",-0.10980272,-0.021178246,0.050660133,0.10693216,0.021178246,-0.08564758,0.8319141,0.60255784,-1.0287753,-0.040927958,1.0287753,"down","JMY",133746,"0006281 // DNA repair // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from sequence or structural similarity /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from sequence or structural similarity /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0034314 // Arp2/3 complex-mediated actin nucleation // inferred from sequence or structural similarity /// 0034314 // Arp2/3 complex-mediated actin nucleation // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from sequence or structural similarity /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0070060 // 'de novo' actin filament nucleation // inferred from sequence or structural similarity /// 0070060 // 'de novo' actin filament nucleation // inferred from electronic annotation /// 0070358 // actin polymerization-dependent cell motility // inferred from sequence or structural similarity /// 0070358 // actin polymerization-dependent cell motility // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from direct assay","0003713 // transcription coactivator activity // inferred from sequence or structural similarity /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr5:78531924-78623038 (+) // 95.08 // q14.1"]
["11758234_s_at",0.049788475,0.123493195,0.17956257,-0.16160583,-0.049788475,-0.15392303,0.116620935,0.010057803,1.1804911,0.23938715,1.1804911,"up","MED21",9412,"0001824 // blastocyst development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0016592 // mediator complex // inferred from direct assay /// 0016592 // mediator complex // inferred from electronic annotation","0003713 // transcription coactivator activity // inferred from direct assay /// 0003899 // DNA-directed RNA polymerase activity // traceable author statement","chr12:27182182-27182678 (+) // 83.08 // p11.23"]
["11725189_x_at",0.13724399,0.008567095,0.09865308,-0.13344002,-0.008567095,-0.20224786,0.24411705,0.045349084,1.1457082,0.19623965,1.1457082,"up","GPR126",57211,"0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement","chr6:142623055-142767401 (+) // 99.03 // q24.1"]
["11722974_a_at",0.1795311,-0.09473705,-0.121567726,0.23072815,0.09473705,-0.19096184,0.8976324,0.7347714,-1.0403669,-0.057092387,1.0403669,"down","WDR90",197335,"","","","chr16:699362-717830 (+) // 98.43 // p13.3"]
["11724200_a_at",0.07514429,-0.14342713,-0.12146807,0.18766594,-0.07514429,0.14805841,0.5528013,0.23450549,-1.1096543,-0.1501103,1.1096543,"down","PYGM",5837,"0001666 // response to hypoxia // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005977 // glycogen metabolic process // traceable author statement /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0005980 // glycogen catabolic process // traceable author statement /// 0005980 // glycogen catabolic process // inferred from electronic annotation /// 0006006 // glucose metabolic process // traceable author statement /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0051591 // response to cAMP // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016529 // sarcoplasmic reticulum // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004645 // phosphorylase activity // inferred from electronic annotation /// 0008144 // drug binding // inferred from electronic annotation /// 0008184 // glycogen phosphorylase activity // inferred from electronic annotation /// 0008184 // glycogen phosphorylase activity // traceable author statement /// 0016208 // AMP binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation","chr11:64513861-64528187 (-) // 98.03 // q13.1"]
["11751085_a_at",0.01653099,-0.11042404,-0.23494339,0.011723518,-0.011723518,0.11915493,0.44047683,0.14648044,-1.1090547,-0.1493305,1.1090547,"down","GBA",2629,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006665 // sphingolipid metabolic process // inferred from electronic annotation /// 0006680 // glucosylceramide catabolic process // inferred from mutant phenotype /// 0006687 // glycosphingolipid metabolic process // traceable author statement /// 0007040 // lysosome organization // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0023021 // termination of signal transduction // inferred from mutant phenotype /// 0032715 // negative regulation of interleukin-6 production // inferred from direct assay /// 0035307 // positive regulation of protein dephosphorylation // inferred from mutant phenotype /// 0043407 // negative regulation of MAP kinase activity // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0046512 // sphingosine biosynthetic process // inferred from mutant phenotype /// 0046513 // ceramide biosynthetic process // inferred from mutant phenotype /// 0050728 // negative regulation of inflammatory response // inferred by curator /// 0071356 // cellular response to tumor necrosis factor // inferred from mutant phenotype","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from sequence or structural similarity /// 0005765 // lysosomal membrane // traceable author statement /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043202 // lysosomal lumen // inferred from sequence or structural similarity /// 0043202 // lysosomal lumen // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004348 // glucosylceramidase activity // inferred from direct assay /// 0004348 // glucosylceramidase activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from sequence or structural similarity /// 0005102 // receptor binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0043169 // cation binding // inferred from electronic annotation","chr1:155204519-155211017 (-) // 99.88 // q22"]
["11723154_s_at",0.14130974,0.012079716,-0.083934784,0.26595592,-0.012079239,-0.2014041,0.99042434,0.9718169,1.0039314,0.005660696,1.0039314,"up","CAMTA1",23261,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr1:6845383-7829764 (+) // 97.28 // p36.31"]
["11763795_a_at",0.03429675,-0.054421186,-0.01830101,0.029894829,-0.032684803,0.018300772,0.8329996,0.60572284,-1.0125399,-0.017978707,1.0125399,"down","PICK1",9463,"0006200 // ATP catabolic process // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006605 // protein targeting // inferred from electronic annotation /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // non-traceable author statement /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007268 // synaptic transmission // traceable author statement /// 0015844 // monoamine transport // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0043045 // DNA methylation involved in embryo development // non-traceable author statement /// 0043046 // DNA methylation involved in gamete generation // traceable author statement /// 0043113 // receptor clustering // inferred from sequence or structural similarity /// 0043113 // receptor clustering // inferred from electronic annotation /// 0045161 // neuronal ion channel clustering // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0042734 // presynaptic membrane // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0045202 // synapse // inferred from sequence or structural similarity /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005080 // protein kinase C binding // inferred from sequence or structural similarity /// 0005080 // protein kinase C binding // inferred from electronic annotation /// 0005102 // receptor binding // inferred from sequence or structural similarity /// 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from sequence or structural similarity /// 0019899 // enzyme binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr22:38453401-38470948 (+) // 96.2 // q13.1"]
["11727667_at",0.1425929,-0.13415432,0.0011849403,-0.20658636,-0.0011849403,0.22627974,0.9944486,0.98502964,-1.0020549,-0.002961595,1.0020549,"down","DNAH7",56171,"0001539 // ciliary or flagellar motility // non-traceable author statement /// 0007018 // microtubule-based movement // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005858 // axonemal dynein complex // non-traceable author statement /// 0005874 // microtubule // inferred from electronic annotation /// 0005929 // cilium // inferred from direct assay /// 0005929 // cilium // inferred from electronic annotation /// 0030286 // dynein complex // inferred from electronic annotation /// 0035085 // cilium axoneme // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // non-traceable author statement /// 0003777 // microtubule motor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr2:196602432-196933554 (-) // 99.13 // q32.3"]
["11721026_a_at",0.08927059,-0.07801342,-0.1834631,0.048098564,0.0030584335,-0.0030579567,0.7137339,0.4160215,-1.052219,-0.07343505,1.052219,"down","OCEL1",79629,"","","","chr19:17337012-17340028 (+) // 82.65 // p13.11"]
["11754586_x_at",-0.07718754,-0.07455063,-0.103987694,0.34753227,0.08043575,0.07455063,0.2550619,0.049200624,-1.1914746,-0.25274813,1.1914746,"down","WDR82",80335,"0051568 // histone H3-K4 methylation // inferred from direct assay","0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0035097 // histone methyltransferase complex // inferred from direct assay /// 0048188 // Set1C/COMPASS complex // inferred from direct assay /// 0072357 // PTW/PP1 phosphatase complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from direct assay","chr3:52288282-52302154 (-) // 88.78 // p21.2"]
["11755263_s_at",-0.11478305,0.20384169,0.054826736,-0.04354024,-0.0763607,0.04354024,0.7706523,0.49850962,1.0522046,0.07341527,1.0522046,"up","HSPC072",29075,"","","","chr20:18768847-18774634 (-) // 31.16 // p11.23"]
["11756769_a_at",-0.14566135,0.017658234,-0.01579094,0.01579094,-0.20823193,0.05823517,0.99148506,0.97516793,-1.0022178,-0.0031960225,1.0022178,"down","IL12A",3592,"0001916 // positive regulation of T cell mediated cytotoxicity // inferred from direct assay /// 0002860 // positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target // inferred from direct assay /// 0006955 // immune response // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0009615 // response to virus // inferred from expression pattern /// 0010224 // response to UV-B // inferred from direct assay /// 0016477 // cell migration // inferred from direct assay /// 0032496 // response to lipopolysaccharide // inferred from direct assay /// 0032700 // negative regulation of interleukin-17 production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0032816 // positive regulation of natural killer cell activation // inferred from direct assay /// 0034393 // positive regulation of smooth muscle cell apoptotic process // inferred from direct assay /// 0042102 // positive regulation of T cell proliferation // inferred from electronic annotation /// 0042520 // positive regulation of tyrosine phosphorylation of Stat4 protein // inferred from direct assay /// 0042832 // defense response to protozoan // inferred from electronic annotation /// 0045785 // positive regulation of cell adhesion // inferred from direct assay /// 0045954 // positive regulation of natural killer cell mediated cytotoxicity // inferred from direct assay /// 0048662 // negative regulation of smooth muscle cell proliferation // inferred from direct assay /// 0050671 // positive regulation of lymphocyte proliferation // inferred from direct assay /// 0050830 // defense response to Gram-positive bacterium // inferred from expression pattern /// 0051135 // positive regulation of NK T cell activation // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0043514 // interleukin-12 complex // inferred from direct assay /// 0043514 // interleukin-12 complex // non-traceable author statement /// 0043514 // interleukin-12 complex // inferred from electronic annotation","0005125 // cytokine activity // inferred from direct assay /// 0005125 // cytokine activity // traceable author statement /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005143 // interleukin-12 receptor binding // non-traceable author statement /// 0005143 // interleukin-12 receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from direct assay /// 0008083 // growth factor activity // non-traceable author statement /// 0008083 // growth factor activity // inferred from electronic annotation /// 0042163 // interleukin-12 beta subunit binding // inferred from electronic annotation /// 0045513 // interleukin-27 binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from physical interaction","chr3:159706647-159713805 (+) // 86.87 // q25.33"]
["11760162_at",0.40301418,0.032687187,-0.01931858,0.01931858,-0.02078724,-0.15014935,0.5744972,0.25456032,1.1402369,0.18933353,1.1402369,"up","WSB1",26118,"0016310 // phosphorylation // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation","chr17:25629460-25639895 (+) // 91.82 // q11.1"]
["11732201_a_at",0.22476768,0.11448765,0.09185505,-0.21609306,-0.12087059,-0.09185505,0.096505746,0.0067275986,1.2197987,0.28664306,1.2197987,"up","TMEM39A",55254,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:119149700-119182529 (-) // 95.13 // q13.33"]
["11721905_a_at",-0.018016815,0.018016815,0.041606903,-0.021305084,0.08737755,-0.11528683,0.855109,0.64607966,1.0212059,0.03027378,1.0212059,"up","PSMA4",5685,"0000075 // cell cycle checkpoint // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from electronic annotation","0000502 // proteasome complex // traceable author statement /// 0000502 // proteasome complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005839 // proteasome core complex // inferred from electronic annotation /// 0019773 // proteasome core complex, alpha-subunit complex // inferred from electronic annotation","0004175 // endopeptidase activity // inferred from electronic annotation /// 0004298 // threonine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr15:78832746-78841546 (+) // 95.14 // q25.1"]
["11760676_at",-0.022727966,-0.20718622,-0.0923748,0.20723677,0.101428986,0.022727966,0.24400768,0.045301948,-1.1630348,-0.21789426,1.1630348,"down","NUPL2",11097,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006611 // protein export from nucleus // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0010827 // regulation of glucose transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0005049 // nuclear export signal receptor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:23221656-23228075 (+) // 78.52 // p15.3"]
["11748734_s_at",0.22169876,-0.1061182,-0.17702532,0.19343805,0.0015091896,-0.0015087128,0.81549776,0.5733075,-1.0606592,-0.08496114,1.0606592,"down","TBC1D25",4943,"0016242 // negative regulation of macroautophagy // inferred from mutant phenotype /// 0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from direct assay /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005776 // autophagic vacuole // inferred from direct assay","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008483 // transaminase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chrX:48398116-48419744 (+) // 99.85 // p11.23"]
["11762793_at",-0.007657528,-0.03101635,0.007657528,-0.32195377,0.08219004,0.23867798,0.98480535,0.9553336,-1.0069394,-0.009976877,1.0069394,"down","YWHAE",7531,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0001764 // neuron migration // inferred from electronic annotation /// 0006605 // protein targeting // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0021766 // hippocampus development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0035308 // negative regulation of protein dephosphorylation // inferred from electronic annotation /// 0035329 // hippo signaling cascade // traceable author statement /// 0035556 // intracellular signal transduction // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005871 // kinesin complex // inferred from electronic annotation /// 0033267 // axon part // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0050815 // phosphoserine binding // inferred from physical interaction /// 0051219 // phosphoprotein binding // inferred from physical interaction","chr17:1302126-1303500 (-) // 99.93 // p13.3"]
["11715575_x_at",0.18566322,-0.021090508,-0.11188698,0.11567783,0.019522667,-0.019522667,0.94201624,0.83884805,-1.0146607,-0.020997398,1.0146607,"down","PPM1G",5496,"0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0035970 // peptidyl-threonine dephosphorylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008287 // protein serine/threonine phosphatase complex // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // inferred from direct assay /// 0004722 // protein serine/threonine phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:27604065-27632422 (-) // 49.13 // p23.3"]
["11724103_x_at",-0.32530403,-0.40677214,-0.44064188,0.7247195,0.73763657,0.32530403,0.05673671,0.002113484,-1.9817743,-0.9867927,1.9817743,"down","C8orf44-SGK3 /// SGK3","100533105 /// 23678","0001558 // regulation of cell growth // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006950 // response to stress // traceable author statement /// 0007154 // cell communication // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030334 // regulation of cell migration // traceable author statement /// 0042127 // regulation of cell proliferation // traceable author statement /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement","0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005246 // calcium channel regulator activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0015459 // potassium channel regulator activity // traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017080 // sodium channel regulator activity // traceable author statement /// 0017081 // chloride channel regulator activity // traceable author statement /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr8:67624652-67774257 (+) // 83.03 // q13.1"]
["11742203_x_at",-0.1035285,-0.0062880516,0.074335575,0.0062880516,-0.027312756,0.080602646,0.84555674,0.62814754,-1.0222062,-0.031686228,1.0222062,"down","PCDHGA11 /// PCDHGA5 /// PCDHGA7 /// PCDHGC3","5098 /// 56105 /// 56108 /// 56110","0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016339 // calcium-dependent cell-cell adhesion // non-traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr5:140800536-140892546 (+) // 100.0 // q31.3"]
["11718676_x_at",0.109989166,0.0966177,0.06197548,-0.06197548,-0.22032738,-0.29746246,0.14630704,0.016190296,1.216539,0.28278258,1.216539,"up","TMEM245",23731,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","","chr9:111777431-111882230 (-) // 82.14 // q31.3"]
["11736380_s_at",-0.1958394,0.08726835,-0.0034074783,-0.035600185,0.08172035,0.0034074783,0.82077765,0.5832097,-1.0380208,-0.05383542,1.0380208,"down","ZNF697",90874,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:120162044-120168767 (-) // 93.51 // p12"]
["11716547_s_at",0.019381523,-0.07666302,0.010960102,-0.044645786,-0.010960579,0.1869688,0.7664545,0.49255323,-1.041908,-0.05922793,1.041908,"down","TLR9",54106,"0002237 // response to molecule of bacterial origin // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007252 // I-kappaB phosphorylation // inferred from direct assay /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0030277 // maintenance of gastrointestinal epithelium // inferred from sequence or structural similarity /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0032715 // negative regulation of interleukin-6 production // inferred from sequence or structural similarity /// 0032717 // negative regulation of interleukin-8 production // inferred from direct assay /// 0032722 // positive regulation of chemokine production // inferred from direct assay /// 0032728 // positive regulation of interferon-beta production // inferred from sequence or structural similarity /// 0032733 // positive regulation of interleukin-10 production // inferred from sequence or structural similarity /// 0032735 // positive regulation of interleukin-12 production // inferred from sequence or structural similarity /// 0032741 // positive regulation of interleukin-18 production // inferred from sequence or structural similarity /// 0032755 // positive regulation of interleukin-6 production // inferred from direct assay /// 0032757 // positive regulation of interleukin-8 production // inferred from direct assay /// 0032760 // positive regulation of tumor necrosis factor production // inferred from sequence or structural similarity /// 0034122 // negative regulation of toll-like receptor signaling pathway // inferred from direct assay /// 0034123 // positive regulation of toll-like receptor signaling pathway // inferred from direct assay /// 0042346 // positive regulation of NF-kappaB import into nucleus // inferred from direct assay /// 0042742 // defense response to bacterium // non-traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from direct assay /// 0043507 // positive regulation of JUN kinase activity // inferred from direct assay /// 0045078 // positive regulation of interferon-gamma biosynthetic process // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0045356 // positive regulation of interferon-alpha biosynthetic process // inferred from direct assay /// 0045359 // positive regulation of interferon-beta biosynthetic process // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0046330 // positive regulation of JNK cascade // inferred by curator /// 0050729 // positive regulation of inflammatory response // inferred by curator /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051770 // positive regulation of nitric-oxide synthase biosynthetic process // inferred from sequence or structural similarity","0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // non-traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from sequence or structural similarity /// 0005764 // lysosome // inferred from electronic annotation /// 0005768 // endosome // inferred from sequence or structural similarity /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032009 // early phagosome // inferred from sequence or structural similarity /// 0036020 // endolysosome membrane // traceable author statement /// 0045335 // phagocytic vesicle // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005149 // interleukin-1 receptor binding // inferred from physical interaction /// 0035197 // siRNA binding // inferred from mutant phenotype","chr3:52255096-52273276 (-) // 95.16 // p21.2"]
["11727286_a_at",0.05941868,-0.06259918,0.028879166,0.16146326,-0.028879166,-0.06924629,0.95902854,0.8830147,-1.0087345,-0.012546455,1.0087345,"down","ZNF323",64288,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:28292513-28304722 (-) // 72.72 // p22.1"]
["11738762_at",-0.07363701,0.04316616,-0.04316616,-0.25138283,0.36477566,0.3520503,0.72577655,0.4328652,-1.1326431,-0.17969334,1.1326431,"down","OR6Q1",219952,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:57798401-57799403 (+) // 100.0 // q12.1"]
["11720400_at",0.4216385,-0.01624918,-0.06702757,0.36087322,-0.093276024,0.01624918,0.97696453,0.93421674,1.0126754,0.018171817,1.0126754,"up","NCS1",23413,"0010975 // regulation of neuron projection development // inferred from sequence or structural similarity /// 0010975 // regulation of neuron projection development // inferred from electronic annotation /// 0045921 // positive regulation of exocytosis // inferred from electronic annotation /// 0048015 // phosphatidylinositol-mediated signaling // inferred from electronic annotation /// 0051927 // negative regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from sequence or structural similarity /// 0051927 // negative regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031045 // dense core granule // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005509 // calcium ion binding // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr9:132934641-132999581 (+) // 87.16 // q34.11"]
["11756540_x_at",-0.18169737,0.26035118,0.01285553,-0.190979,-0.01285553,0.1680007,0.9293511,0.809247,1.0298597,0.042447757,1.0298597,"up","TMPRSS5",80975,"0006508 // proteolysis // inferred from mutant phenotype /// 0006508 // proteolysis // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005044 // scavenger receptor activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from mutant phenotype /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr11:113558271-113577065 (-) // 95.05 // q23.2"]
["11756992_a_at",0.013039589,-0.00042819977,-0.09489441,0.10448074,0.00042819977,-0.032198906,0.6932911,0.3880817,-1.0364599,-0.05166433,1.0364599,"down","MARC2",54996,"0042126 // nitrate metabolic process // inferred from direct assay /// 0051410 // detoxification of nitrogen compound // non-traceable author statement /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005777 // peroxisome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0008940 // nitrate reductase activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0030151 // molybdenum ion binding // inferred from direct assay /// 0030151 // molybdenum ion binding // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0043546 // molybdopterin cofactor binding // inferred from direct assay","chr1:220921610-220957580 (+) // 98.74 // q41"]
["11719313_a_at",0.16925287,0.1491332,-0.04085684,0.04085684,-0.40800762,-0.36665344,0.36375737,0.09994767,1.2632246,0.33711118,1.2632246,"up","FAM111A",63901,"0008152 // metabolic process // inferred from electronic annotation","","0003824 // catalytic activity // inferred from electronic annotation","chr11:58910317-58922512 (+) // 78.28 // q12.1"]
["11733985_at",-0.014029503,0.038294315,0.21366382,-0.39730573,0.014029503,-0.07182121,0.4877012,0.1814057,1.1736553,0.23100872,1.1736553,"up","SLC5A8",160728,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation","chr12:101549278-101604185 (-) // 92.54 // q23.1"]
["11718173_a_at",-0.0065555573,0.05497694,-0.1638341,-0.12340498,0.0065555573,0.14140081,0.8649177,0.6664512,-1.0328672,-0.046654765,1.0328672,"down","PNKD",25953,"","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004416 // hydroxyacylglutathione hydrolase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:219135114-219211514 (+) // 83.14 // q35"]
["11735382_at",-0.069719315,-0.010079384,0.010079384,0.05050373,-0.116648436,0.030518532,0.94803894,0.8539449,-1.0079083,-0.011364451,1.0079083,"down","MARVELD3",91862,"0045216 // cell-cell junction organization // inferred from mutant phenotype","0005923 // tight junction // inferred from direct assay /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","","chr16:71660069-71669231 (+) // 81.29 // q22.2"]
["11724809_at",-0.07152748,0.44589615,0.30884743,-0.015748978,-0.01636219,0.015748978,0.5202367,0.20723103,1.1754334,0.23319279,1.1754334,"up","CBL",867,"0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // inferred from mutant phenotype /// 0016567 // protein ubiquitination // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0023051 // regulation of signaling // inferred from electronic annotation /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0048260 // positive regulation of receptor-mediated endocytosis // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016600 // flotillin complex // inferred from sequence or structural similarity /// 0016600 // flotillin complex // inferred from electronic annotation","0001784 // phosphotyrosine binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0004842 // ubiquitin-protein ligase activity // traceable author statement /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046875 // ephrin receptor binding // inferred from physical interaction /// 0046875 // ephrin receptor binding // inferred from electronic annotation","chr11:119076984-119178859 (+) // 95.88 // q23.3"]
["11761724_at",0.0044374466,-0.004437208,-0.016761303,0.006755352,-0.027478695,0.07332945,0.7626849,0.486939,-1.0161563,-0.02312235,1.0161563,"down","SCGB2A2",4250,"","","0005496 // steroid binding // inferred from electronic annotation","chr11:62037629-62039513 (+) // 77.86 // q12.3"]
["11749144_s_at",-0.038333893,-0.094491005,-0.048527718,0.038333893,0.07786274,0.07430458,0.07861495,0.0044125533,-1.0897154,-0.123951346,1.0897154,"down","ETFDH",2110,"0006810 // transport // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from sequence or structural similarity /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from direct assay /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0033539 // fatty acid beta-oxidation using acyl-CoA dehydrogenase // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031305 // integral to mitochondrial inner membrane // inferred from direct assay /// 0031966 // mitochondrial membrane // inferred from direct assay /// 0031966 // mitochondrial membrane // inferred from electronic annotation","0004174 // electron-transferring-flavoprotein dehydrogenase activity // inferred from direct assay /// 0004174 // electron-transferring-flavoprotein dehydrogenase activity // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0043783 // oxidoreductase activity, oxidizing metal ions with flavin as acceptor // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048038 // quinone binding // inferred from direct assay /// 0048039 // ubiquinone binding // inferred from direct assay /// 0050660 // flavin adenine dinucleotide binding // inferred from sequence or structural similarity /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from direct assay /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation","chr4:159602865-159629865 (+) // 91.13 // q32.1"]
["11754898_a_at",-0.054661274,-0.15899706,-0.1382122,0.11023569,0.12090874,0.054661274,0.08334051,0.0049770903,-1.1587415,-0.21255872,1.1587415,"down","ZNF573",126231,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:38229202-38270225 (-) // 91.64 // q13.12"]
["11736992_a_at",-0.049829245,0.018893003,0.045516253,-0.21290898,-0.018893003,0.033824205,0.7212312,0.42697558,1.0503372,0.070852555,1.0503372,"up","C3orf55",152078,"","","","chr3:157261034-157296674 (+) // 94.65 // q25.32"]
["11721052_at",-0.10330629,-0.02690792,0.40141058,0.4462428,0.02690792,-0.11793232,0.9674515,0.909281,-1.0196029,-0.028007373,1.0196029,"down","KLHDC5",57542,"","","","chr12:27932813-27955972 (+) // 90.33 // p11.22"]
["11746204_a_at",0.01945877,-0.1489973,-0.01945877,-0.09409428,0.19378853,0.13148308,0.5986697,0.27867624,-1.0918124,-0.12672494,1.0918124,"down","NFASC",23114,"0002175 // protein localization to paranode region of axon // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0007422 // peripheral nervous system development // inferred from sequence or structural similarity /// 0007422 // peripheral nervous system development // inferred from electronic annotation /// 0019226 // transmission of nerve impulse // inferred from electronic annotation /// 0030913 // paranodal junction assembly // inferred from electronic annotation /// 0042552 // myelination // inferred from sequence or structural similarity /// 0042552 // myelination // inferred from electronic annotation /// 0050808 // synapse organization // inferred from electronic annotation /// 0071205 // protein localization to juxtaparanode region of axon // inferred from electronic annotation","0005622 // intracellular // inferred from sequence or structural similarity /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0033010 // paranodal junction // inferred from electronic annotation /// 0033268 // node of Ranvier // inferred from sequence or structural similarity /// 0033268 // node of Ranvier // traceable author statement /// 0033268 // node of Ranvier // inferred from electronic annotation /// 0033270 // paranode region of axon // inferred from electronic annotation /// 0043194 // initial segment // inferred from sequence or structural similarity","","chr1:204797700-204946274 (+) // 98.54 // q32.1"]
["11729367_at",0.39368868,0.021429539,0.12647486,-0.22267294,-0.1436038,-0.021429539,0.30078033,0.06881344,1.2395071,0.3097665,1.2395071,"up","PRKAA2",5563,"0006112 // energy reserve metabolic process // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // inferred from electronic annotation /// 0006853 // carnitine shuttle // traceable author statement /// 0006914 // autophagy // inferred from electronic annotation /// 0006950 // response to stress // inferred from sequence or structural similarity /// 0006950 // response to stress // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008610 // lipid biosynthetic process // inferred from sequence or structural similarity /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0010508 // positive regulation of autophagy // inferred from sequence or structural similarity /// 0010508 // positive regulation of autophagy // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0019216 // regulation of lipid metabolic process // inferred from electronic annotation /// 0031000 // response to caffeine // inferred from electronic annotation /// 0031669 // cellular response to nutrient levels // inferred from sequence or structural similarity /// 0031669 // cellular response to nutrient levels // inferred from electronic annotation /// 0032007 // negative regulation of TOR signaling cascade // inferred from sequence or structural similarity /// 0032007 // negative regulation of TOR signaling cascade // inferred from electronic annotation /// 0035404 // histone-serine phosphorylation // inferred from sequence or structural similarity /// 0035404 // histone-serine phosphorylation // inferred from electronic annotation /// 0042149 // cellular response to glucose starvation // inferred from sequence or structural similarity /// 0042149 // cellular response to glucose starvation // inferred from electronic annotation /// 0042304 // regulation of fatty acid biosynthetic process // traceable author statement /// 0042593 // glucose homeostasis // inferred from sequence or structural similarity /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0042752 // regulation of circadian rhythm // inferred from sequence or structural similarity /// 0042752 // regulation of circadian rhythm // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from sequence or structural similarity /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045821 // positive regulation of glycolysis // inferred from sequence or structural similarity /// 0046320 // regulation of fatty acid oxidation // traceable author statement /// 0048511 // rhythmic process // inferred from electronic annotation /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0055089 // fatty acid homeostasis // inferred from sequence or structural similarity /// 0071417 // cellular response to organic nitrogen // inferred from electronic annotation /// 2000505 // regulation of energy homeostasis // inferred from sequence or structural similarity","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0031588 // AMP-activated protein kinase complex // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from sequence or structural similarity /// 0003682 // chromatin binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from sequence or structural similarity /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004679 // AMP-activated protein kinase activity // inferred from direct assay /// 0004679 // AMP-activated protein kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0030674 // protein binding, bridging // inferred from electronic annotation /// 0035174 // histone serine kinase activity // inferred from sequence or structural similarity /// 0035174 // histone serine kinase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:57110845-57181008 (+) // 89.25 // p32.2"]
["11740483_at",-0.06510544,-0.07283926,0.081361294,-0.06770182,0.06510544,0.28454733,0.6861676,0.37940297,-1.0813584,-0.1128448,1.0813584,"down","TNR",7143,"0007155 // cell adhesion // non-traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007158 // neuron cell-cell adhesion // inferred from electronic annotation /// 0007162 // negative regulation of cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007411 // axon guidance // non-traceable author statement /// 0008306 // associative learning // inferred from electronic annotation /// 0010977 // negative regulation of neuron projection development // inferred from electronic annotation /// 0022029 // telencephalon cell migration // inferred from electronic annotation /// 0022408 // negative regulation of cell-cell adhesion // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030517 // negative regulation of axon extension // inferred from electronic annotation /// 0035641 // locomotory exploration behavior // inferred from electronic annotation /// 0048692 // negative regulation of axon extension involved in regeneration // inferred from electronic annotation /// 0050804 // regulation of synaptic transmission // inferred from electronic annotation /// 0050805 // negative regulation of synaptic transmission // inferred from electronic annotation /// 0050808 // synapse organization // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation /// 0051968 // positive regulation of synaptic transmission, glutamatergic // inferred from electronic annotation /// 0051971 // positive regulation of transmission of nerve impulse // inferred from electronic annotation /// 0060291 // long-term synaptic potentiation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation /// 0072534 // perineuronal net // inferred from electronic annotation","0005102 // receptor binding // inferred from electronic annotation /// 0005178 // integrin binding // inferred from electronic annotation","chr1:175291877-175712906 (-) // 96.65 // q25.1"]
["11715220_s_at",0.06306267,-0.077858925,-0.0041561127,0.0041561127,-0.09284687,0.08602381,0.97852194,0.93820596,-1.0037699,-0.005428553,1.0037699,"down","C2orf44",80304,"","","","chr2:24252205-24270296 (-) // 99.92 // p23.3"]
["11753116_a_at",-0.008152962,-0.094083786,0.063313484,-0.15090895,0.07520771,0.008152962,0.9685549,0.9119402,1.0066357,0.00954162,1.0066357,"up","SOX10",6663,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0001755 // neural crest cell migration // inferred from electronic annotation /// 0002052 // positive regulation of neuroblast proliferation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007422 // peripheral nervous system development // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0014015 // positive regulation of gliogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030318 // melanocyte differentiation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048469 // cell maturation // inferred from electronic annotation /// 0048484 // enteric nervous system development // inferred from electronic annotation /// 0048546 // digestive tract morphogenesis // inferred from electronic annotation /// 0048589 // developmental growth // inferred from electronic annotation /// 0048709 // oligodendrocyte differentiation // inferred from electronic annotation /// 0048863 // stem cell differentiation // inferred from electronic annotation /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0031315 // extrinsic to mitochondrial outer membrane // inferred from electronic annotation","0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from electronic annotation /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from electronic annotation /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation","chr22:38369456-38380562 (-) // 94.53 // q13.1"]
["11727099_a_at",0.5615568,-0.026620865,-0.15099382,0.45038748,-0.16225529,0.026620865,0.978932,0.93934256,1.0161145,0.023062943,1.0161145,"up","NUMBL",9253,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007405 // neuroblast proliferation // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from direct assay /// 0019538 // protein metabolic process // inferred from direct assay /// 0021670 // lateral ventricle development // inferred from sequence or structural similarity /// 0021670 // lateral ventricle development // inferred from electronic annotation /// 0021849 // neuroblast division in subventricular zone // inferred from sequence or structural similarity /// 0021849 // neuroblast division in subventricular zone // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0034332 // adherens junction organization // inferred from electronic annotation /// 0050769 // positive regulation of neurogenesis // inferred from sequence or structural similarity /// 0050769 // positive regulation of neurogenesis // inferred from electronic annotation /// 0050775 // positive regulation of dendrite morphogenesis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr19:41171813-41196558 (-) // 86.81 // q13.2"]
["11723740_s_at",-0.22073936,-0.1245842,-0.15984917,0.20343304,0.12676144,0.1245842,0.04263758,0.0011135231,-1.2483165,-0.31998378,1.2483165,"down","WDR36",134430,"0006364 // rRNA processing // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0032040 // small-subunit processome // inferred from electronic annotation","","chr5:110427869-110466200 (+) // 82.61 // q22.1"]
["11716683_x_at",0.010417938,0.19676876,0.20545483,-0.2591114,-0.010417938,-0.028370857,0.32791656,0.08149618,1.1784146,0.23684719,1.1784146,"up","SLC39A9",55334,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006829 // zinc ion transport // inferred from electronic annotation /// 0030001 // metal ion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0046873 // metal ion transmembrane transporter activity // inferred from electronic annotation","chr14:69865074-69929107 (+) // 97.91 // q24.1"]
["11754466_a_at",0.42349434,-0.03313923,0.022322655,0.28132057,-0.022322655,-0.05617237,0.88912755,0.71657616,1.0496808,0.06995072,1.0496808,"up","SH3BP4",23677,"0006897 // endocytosis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr2:235887346-235964290 (+) // 99.53 // q37.2"]
["11760417_at",0.11382437,-0.025502682,0.025502682,-0.15473747,0.040347576,-0.10150337,0.50712955,0.19672279,1.0791578,0.109905876,1.0791578,"up","DUOXA1",90527,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr15:45409568-45422075 (-) // 87.29 // q21.1"]
["11718211_s_at",0.010704994,0.059682846,-0.010704994,-0.18635082,-0.18495464,0.06573486,0.5489151,0.23134556,1.0880548,0.12175119,1.0880548,"up","PYCR1",5831,"0006561 // proline biosynthetic process // inferred from direct assay /// 0006561 // proline biosynthetic process // inferred from electronic annotation /// 0006561 // proline biosynthetic process // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // traceable author statement /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0034599 // cellular response to oxidative stress // inferred from mutant phenotype /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0055129 // L-proline biosynthetic process // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004735 // pyrroline-5-carboxylate reductase activity // inferred from direct assay /// 0004735 // pyrroline-5-carboxylate reductase activity // traceable author statement /// 0004735 // pyrroline-5-carboxylate reductase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction","chr17:79890259-79894968 (-) // 90.68 // q25.3"]
["11759535_at",0.17858744,-0.05665779,-0.10714483,0.009688377,0.10714483,-0.009688377,0.9103378,0.76254594,-1.021569,-0.03078667,1.021569,"down","MRPS12",6183,"0006412 // translation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005761 // mitochondrial ribosome // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr19:39421187-39423802 (+) // 80.09 // q13.2"]
["11737536_a_at",0.2752807,0.006526947,0.113401175,-0.0070757866,-0.006526947,-0.1663754,0.38588884,0.11238783,1.1421317,0.191729,1.1421317,"up","SAMD12",401474,"","","","chr8:119390226-119634184 (-) // 77.77 // q24.12"]
["11735581_a_at",0.009545803,0.021294594,0.044522762,-0.081552505,-0.009545803,-0.03720045,0.24012826,0.04381769,1.0481806,0.067887284,1.0481806,"up","MBNL3",55796,"0006397 // mRNA processing // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0043484 // regulation of RNA splicing // inferred from direct assay /// 0045662 // negative regulation of myoblast differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:131513231-131573718 (-) // 100.0 // q26.2"]
["11748319_x_at",0.009339333,-0.009339333,-0.3454485,0.24811459,-0.039523125,0.110327244,0.5041659,0.19408268,-1.1659094,-0.2214557,1.1659094,"down","TP53",7157,"0000060 // protein import into nucleus, translocation // inferred from electronic annotation /// 0000075 // cell cycle checkpoint // traceable author statement /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // not recorded /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000733 // DNA strand renaturation // inferred from direct assay /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001836 // release of cytochrome c from mitochondria // inferred from electronic annotation /// 0002309 // T cell proliferation involved in immune response // inferred from electronic annotation /// 0002326 // B cell lineage commitment // inferred from electronic annotation /// 0002360 // T cell lineage commitment // inferred from electronic annotation /// 0006284 // base-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // inferred from mutant phenotype /// 0006302 // double-strand break repair // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006461 // protein complex assembly // inferred from direct assay /// 0006915 // apoptotic process // inferred from direct assay /// 0006915 // apoptotic process // inferred from mutant phenotype /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // inferred from electronic annotation /// 0006978 // DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator // inferred from mutant phenotype /// 0006983 // ER overload response // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007050 // cell cycle arrest // inferred from mutant phenotype /// 0007265 // Ras protein signal transduction // inferred from expression pattern /// 0007275 // multicellular organismal development // inferred from mutant phenotype /// 0007369 // gastrulation // inferred from electronic annotation /// 0007406 // negative regulation of neuroblast proliferation // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0007569 // cell aging // inferred from mutant phenotype /// 0007569 // cell aging // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008104 // protein localization // inferred from direct assay /// 0008156 // negative regulation of DNA replication // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008340 // determination of adult lifespan // inferred from sequence or structural similarity /// 0008340 // determination of adult lifespan // inferred from electronic annotation /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0009303 // rRNA transcription // inferred from electronic annotation /// 0009411 // response to UV // inferred from electronic annotation /// 0009792 // embryo development ending in birth or egg hatching // inferred from electronic annotation /// 0010165 // response to X-ray // not recorded /// 0010165 // response to X-ray // inferred from electronic annotation /// 0010332 // response to gamma radiation // inferred from mutant phenotype /// 0010332 // response to gamma radiation // inferred from electronic annotation /// 0030154 // cell differentiation // traceable author statement /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from direct assay /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from mutant phenotype /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0031065 // positive regulation of histone deacetylation // not recorded /// 0031065 // positive regulation of histone deacetylation // inferred from electronic annotation /// 0031571 // mitotic cell cycle G1/S transition DNA damage checkpoint // inferred from mutant phenotype /// 0031571 // mitotic cell cycle G1/S transition DNA damage checkpoint // inferred from electronic annotation /// 0032461 // positive regulation of protein oligomerization // inferred from direct assay /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0034613 // cellular protein localization // inferred from direct assay /// 0034644 // cellular response to UV // not recorded /// 0034644 // cellular response to UV // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0035690 // cellular response to drug // inferred from expression pattern /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042149 // cellular response to glucose starvation // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation /// 0042771 // DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis // inferred from direct assay /// 0042771 // DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043523 // regulation of neuron apoptotic process // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // not recorded /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046677 // response to antibiotic // inferred from expression pattern /// 0046902 // regulation of mitochondrial membrane permeability // traceable author statement /// 0046902 // regulation of mitochondrial membrane permeability // inferred from electronic annotation /// 0048147 // negative regulation of fibroblast proliferation // inferred from mutant phenotype /// 0048147 // negative regulation of fibroblast proliferation // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from sequence or structural similarity /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0051097 // negative regulation of helicase activity // traceable author statement /// 0051262 // protein tetramerization // traceable author statement /// 0051262 // protein tetramerization // inferred from electronic annotation /// 0051276 // chromosome organization // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0070245 // positive regulation of thymocyte apoptotic process // inferred from sequence or structural similarity /// 0070245 // positive regulation of thymocyte apoptotic process // inferred from electronic annotation /// 0071158 // positive regulation of cell cycle arrest // inferred from mutant phenotype /// 0071456 // cellular response to hypoxia // inferred from expression pattern /// 0071479 // cellular response to ionizing radiation // inferred from mutant phenotype /// 0071850 // mitotic cell cycle arrest // inferred from electronic annotation /// 0072332 // signal transduction by p53 class mediator resulting in induction of apoptosis // inferred from mutant phenotype /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from direct assay /// 0090343 // positive regulation of cell aging // inferred from electronic annotation /// 0090399 // replicative senescence // inferred from mutant phenotype /// 0090403 // oxidative stress-induced premature senescence // inferred from mutant phenotype /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from mutant phenotype /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype","0000785 // chromatin // not recorded /// 0000790 // nuclear chromatin // inferred from direct assay /// 0005626 // insoluble fraction // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005657 // replication fork // not recorded /// 0005657 // replication fork // inferred from electronic annotation /// 0005669 // transcription factor TFIID complex // inferred from direct assay /// 0005678 // chromatin assembly complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // not recorded /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from direct assay /// 0016604 // nuclear body // inferred from direct assay /// 0016605 // PML body // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0000739 // DNA strand annealing activity // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0001085 // RNA polymerase II transcription factor binding // inferred from physical interaction /// 0002020 // protease binding // inferred from physical interaction /// 0002039 // p53 binding // not recorded /// 0003677 // DNA binding // inferred from mutant phenotype /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005507 // copper ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // traceable author statement /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0035033 // histone deacetylase regulator activity // inferred from electronic annotation /// 0035035 // histone acetyltransferase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0051087 // chaperone binding // inferred from physical interaction /// 0051721 // protein phosphatase 2A binding // inferred from physical interaction /// 0070215 // MDM2 binding // inferred from electronic annotation","chr17:7576852-7579912 (-) // 85.89 // p13.1"]
["11757798_s_at",-0.17153168,0.031172752,0.046267986,-0.11953306,0.06079769,-0.031172752,0.9954135,0.9880378,-1.0009669,-0.0013942773,1.0009669,"down","MAFB",9935,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007379 // segment specification // inferred from electronic annotation /// 0007423 // sensory organ development // traceable author statement /// 0007585 // respiratory gaseous exchange // inferred from electronic annotation /// 0021571 // rhombomere 5 development // inferred from electronic annotation /// 0021572 // rhombomere 6 development // inferred from electronic annotation /// 0035284 // brain segmentation // inferred from electronic annotation /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0045647 // negative regulation of erythrocyte differentiation // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr20:39315595-39315960 (-) // 98.38 // q12"]
["11716029_a_at",-0.012508392,-0.036325455,0.012508392,-0.049425125,0.14673805,0.041600227,0.6823884,0.373832,-1.0413196,-0.058412936,1.0413196,"down","NDUFB9",4715,"0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0006120 // mitochondrial electron transport, NADH to ubiquinone // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007605 // sensory perception of sound // traceable author statement /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation","0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement /// 0008137 // NADH dehydrogenase (ubiquinone) activity // traceable author statement","chr8:125551354-125562215 (+) // 66.99 // q24.13"]
["11756982_x_at",0.058761597,-0.15760708,-0.106435776,0.035077095,-0.0017156601,0.0017156601,0.6136585,0.29364172,-1.0571055,-0.08011942,1.0571055,"down","AP3S2 /// C15orf38-AP3S2","100526783 /// 10239","0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005794 // Golgi apparatus // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0008565 // protein transporter activity // inferred from electronic annotation","chr15:90377561-90437224 (-) // 79.11 // q26.1"]
["11731152_s_at",-0.0062818527,0.0062818527,0.029262543,0.045645714,-0.048727036,-0.074154854,0.7037466,0.4019518,1.0249116,0.03549954,1.0249116,"up","LOC100288963 /// MTRR","100288963 /// 4552","0006555 // methionine metabolic process // traceable author statement /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009086 // methionine biosynthetic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0005506 // iron ion binding // inferred from electronic annotation /// 0010181 // FMN binding // traceable author statement /// 0010181 // FMN binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016723 // oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor // inferred from direct assay /// 0030586 // [methionine synthase] reductase activity // traceable author statement /// 0030586 // [methionine synthase] reductase activity // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from direct assay /// 0050660 // flavin adenine dinucleotide binding // traceable author statement /// 0050661 // NADP binding // traceable author statement","chr5:7869216-7901237 (+) // 99.27 // p15.31"]
["11752980_x_at",0.23171043,0.103666306,-0.022521973,-0.03973961,-0.03773594,0.022521973,0.4893815,0.1828233,1.0886972,0.122602746,1.0886972,"up","ABHD12",26090,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016787 // hydrolase activity // inferred from electronic annotation /// 0047372 // acylglycerol lipase activity // inferred from electronic annotation","chr20:25281160-25371349 (-) // 99.56 // p11.21"]
["11761384_at",-0.49904132,0.09149599,0.026492119,-0.27873802,-0.026492119,0.26428747,0.8649177,0.66643834,-1.0817523,-0.11337019,1.0817523,"down","MPP3",4356,"0007165 // signal transduction // traceable author statement","0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay","0004385 // guanylate kinase activity // traceable author statement /// 0030165 // PDZ domain binding // inferred from electronic annotation","chr17:41892992-41910536 (-) // 99.25 // q21.31"]
["11755534_a_at",-0.20476246,-0.021170616,0.012989998,-0.012990475,0.14705563,0.21628857,0.40130642,0.12161465,-1.1389983,-0.18776555,1.1389983,"down","ADCY7",113,"0006112 // energy reserve metabolic process // traceable author statement /// 0006171 // cAMP biosynthetic process // inferred from direct assay /// 0006171 // cAMP biosynthetic process // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway // traceable author statement /// 0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009190 // cyclic nucleotide biosynthetic process // inferred from electronic annotation /// 0030819 // positive regulation of cAMP biosynthetic process // inferred from direct assay /// 0034199 // activation of protein kinase A activity // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0071361 // cellular response to ethanol // inferred from direct assay /// 0071377 // cellular response to glucagon stimulus // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004016 // adenylate cyclase activity // inferred from direct assay /// 0004016 // adenylate cyclase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016849 // phosphorus-oxygen lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:50300461-50344439 (+) // 100.0 // q12.1"]
["11743468_at",0.0041007996,0.017012596,-0.015851974,0.06738472,-0.14860535,-0.004099846,0.8634598,0.66283584,1.0211494,0.030193951,1.0211494,"up","DKC1 /// SNORA56","1736 /// 677835","0000723 // telomere maintenance // traceable author statement /// 0001522 // pseudouridine synthesis // inferred from electronic annotation /// 0006364 // rRNA processing // inferred from electronic annotation /// 0006364 // rRNA processing // traceable author statement /// 0006396 // RNA processing // traceable author statement /// 0006396 // RNA processing // inferred from electronic annotation /// 0007004 // telomere maintenance via telomerase // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0009451 // RNA modification // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005697 // telomerase holoenzyme complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015030 // Cajal body // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003720 // telomerase activity // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0009982 // pseudouridine synthase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation","chrX:153991013-154005959 (+) // 95.17 // q28"]
["11718574_at",-0.31692505,-0.18286896,-0.06310272,0.06310272,0.46950722,0.3317833,0.19005562,0.027351683,-1.3906538,-0.47576335,1.3906538,"down","SERBP1",26135,"0043488 // regulation of mRNA stability // non-traceable author statement /// 0045767 // regulation of anti-apoptosis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr1:67873494-67896452 (-) // 83.45 // p31.3"]
["11750463_a_at",-0.012396336,-0.0595932,-0.11382818,0.14651537,0.012396336,0.4770956,0.4057314,0.1242863,-1.2091068,-0.2739417,1.2091068,"down","CLEC4M",10332,"0006897 // endocytosis // inferred from electronic annotation /// 0007159 // leukocyte cell-cell adhesion // non-traceable author statement /// 0009988 // cell-cell recognition // traceable author statement /// 0019048 // virus-host interaction // traceable author statement /// 0019062 // viral attachment to host cell // traceable author statement /// 0019079 // viral genome replication // non-traceable author statement /// 0019882 // antigen processing and presentation // non-traceable author statement /// 0035556 // intracellular signal transduction // non-traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation /// 0046795 // intracellular virion transport // traceable author statement /// 0046968 // peptide antigen transport // non-traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005622 // intracellular // traceable author statement /// 0005737 // cytoplasm // non-traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // non-traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005537 // mannose binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // non-traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0030369 // ICAM-3 receptor activity // non-traceable author statement /// 0042605 // peptide antigen binding // non-traceable author statement /// 0046790 // virion binding // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:7828129-7833874 (+) // 95.45 // p13.2"]
["11750057_a_at",-0.04940939,0.18357801,0.091796875,-0.110519886,-0.09100485,0.049409866,0.5238356,0.20982058,1.0912842,0.12602681,1.0912842,"up","SPSB3",90864,"0016567 // protein ubiquitination // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr16:1828064-1831498 (-) // 94.88 // p13.3"]
["11744305_a_at",-0.047527313,-0.24447536,0.047527313,0.10664272,-0.1050601,0.09566784,0.6709009,0.35942668,-1.0821561,-0.11390857,1.0821561,"down","LRRK1",79705,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:101459419-101610317 (+) // 96.93 // q26.3"]
["11744844_a_at",-0.096277714,-0.09558439,0.116500854,0.08945227,0.059355736,-0.059355736,0.8018465,0.54937387,-1.0388143,-0.054937787,1.0388143,"down","GON4L",54856,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation","chr1:155722633-155746250 (-) // 92.08 // q22"]
["11732552_a_at",-0.10632086,-0.0040962696,-0.015273571,0.0040962696,0.10924077,0.017532349,0.42747837,0.13816565,-1.0610701,-0.08551995,1.0610701,"down","ENKUR",219670,"","0005929 // cilium // inferred from electronic annotation /// 0019861 // flagellum // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005516 // calmodulin binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation","chr10:25270913-25305085 (-) // 75.02 // p12.1"]
["11761186_at",-0.31383562,0.19344425,0.17311096,-0.04219079,-0.11748004,0.04219103,0.9086946,0.75820655,1.0401078,0.056733124,1.0401078,"up","DDX31",64794,"","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr9:135535749-135545403 (-) // 98.02 // q34.13"]
["11731147_at",-0.27583027,0.1176486,0.054085255,-0.054085255,-0.10513878,0.18038559,0.9235288,0.79498434,-1.0293636,-0.04175272,1.0293636,"down","TLR7",51284,"0002224 // toll-like receptor signaling pathway // inferred from electronic annotation /// 0002282 // microglial cell activation involved in immune response // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007252 // I-kappaB phosphorylation // inferred from direct assay /// 0032722 // positive regulation of chemokine production // inferred from direct assay /// 0032755 // positive regulation of interleukin-6 production // inferred from electronic annotation /// 0032757 // positive regulation of interleukin-8 production // inferred from direct assay /// 0034154 // toll-like receptor 7 signaling pathway // inferred from electronic annotation /// 0042221 // response to chemical stimulus // inferred from electronic annotation /// 0042346 // positive regulation of NF-kappaB import into nucleus // inferred from direct assay /// 0045078 // positive regulation of interferon-gamma biosynthetic process // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0045356 // positive regulation of interferon-alpha biosynthetic process // inferred from direct assay /// 0045356 // positive regulation of interferon-alpha biosynthetic process // inferred from electronic annotation /// 0045359 // positive regulation of interferon-beta biosynthetic process // inferred from direct assay /// 0045416 // positive regulation of interleukin-8 biosynthetic process // inferred from mutant phenotype /// 0050729 // positive regulation of inflammatory response // inferred by curator /// 0051607 // defense response to virus // inferred from mutant phenotype /// 0051607 // defense response to virus // inferred from electronic annotation /// 0052033 // pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern","0000139 // Golgi membrane // traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from sequence or structural similarity /// 0005764 // lysosome // inferred from electronic annotation /// 0005768 // endosome // inferred from sequence or structural similarity /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032009 // early phagosome // inferred from sequence or structural similarity /// 0032009 // early phagosome // inferred from electronic annotation /// 0036020 // endolysosome membrane // traceable author statement /// 0045335 // phagocytic vesicle // inferred from electronic annotation","0003725 // double-stranded RNA binding // inferred from direct assay /// 0003727 // single-stranded RNA binding // inferred from sequence or structural similarity /// 0003727 // single-stranded RNA binding // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0008144 // drug binding // inferred from electronic annotation /// 0035197 // siRNA binding // inferred from sequence or structural similarity /// 0035197 // siRNA binding // inferred from electronic annotation","chrX:12885115-12908480 (+) // 93.51 // p22.2"]
["11755706_a_at",-0.011306763,0.21312904,0.22969437,-0.16209507,0.011306763,-0.11032677,0.29986832,0.068366766,1.1735483,0.23087727,1.1735483,"up","BBX",56987,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr3:107429296-107491917 (+) // 82.37 // q13.12"]
["11716548_x_at",0.5208421,0.31081724,0.20474386,-0.2072115,-0.20474434,-0.24185753,0.074770756,0.0038445531,1.4777534,0.5634055,1.4777534,"up","FGFR1",2260,"0000165 // MAPK cascade // traceable author statement /// 0001501 // skeletal system development // traceable author statement /// 0001764 // neuron migration // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from genetic interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from physical interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0010518 // positive regulation of phospholipase activity // traceable author statement /// 0010863 // positive regulation of phospholipase C activity // inferred from direct assay /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // traceable author statement /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0043009 // chordate embryonic development // traceable author statement /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0043410 // positive regulation of MAPK cascade // inferred from mutant phenotype /// 0045595 // regulation of cell differentiation // traceable author statement /// 0045666 // positive regulation of neuron differentiation // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048705 // skeletal system morphogenesis // traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from direct assay /// 0005007 // fibroblast growth factor-activated receptor activity // traceable author statement /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from direct assay /// 0008201 // heparin binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017134 // fibroblast growth factor binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction","chr8:38267736-38326352 (-) // 88.37 // p11.23"]
["11755506_a_at",-0.25847912,-0.119960785,0.007871628,0.68287754,0.26652145,-0.007871628,0.38478947,0.11170151,-1.3541291,-0.43736526,1.3541291,"down","PICALM",8301,"0006461 // protein complex assembly // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // inferred from direct assay /// 0006898 // receptor-mediated endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // inferred from sequence or structural similarity /// 0007409 // axonogenesis // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // traceable author statement /// 0016197 // endosomal transport // inferred from mutant phenotype /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0030100 // regulation of endocytosis // inferred from mutant phenotype /// 0031623 // receptor internalization // inferred from mutant phenotype /// 0032880 // regulation of protein localization // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0048261 // negative regulation of receptor-mediated endocytosis // inferred from direct assay /// 0048268 // clathrin coat assembly // inferred from mutant phenotype /// 0048268 // clathrin coat assembly // inferred from electronic annotation /// 0048813 // dendrite morphogenesis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005905 // coated pit // inferred from direct assay /// 0005905 // coated pit // inferred from electronic annotation /// 0005905 // coated pit // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0030118 // clathrin coat // inferred from electronic annotation /// 0030122 // AP-2 adaptor complex // inferred from direct assay /// 0030132 // clathrin coat of coated pit // inferred from direct assay /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from sequence or structural similarity /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045211 // postsynaptic membrane // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0005545 // 1-phosphatidylinositol binding // inferred from sequence or structural similarity /// 0005545 // 1-phosphatidylinositol binding // inferred from electronic annotation /// 0030276 // clathrin binding // inferred from direct assay /// 0030276 // clathrin binding // inferred from electronic annotation /// 0030276 // clathrin binding // inferred from sequence or structural similarity /// 0032050 // clathrin heavy chain binding // inferred from direct assay","chr11:85669642-85693032 (-) // 93.19 // q14.2"]
["11727092_x_at",0.027163506,-0.1897335,-0.027163506,0.5499315,0.23617077,-0.070679665,0.49710876,0.18866484,-1.232612,-0.30171874,1.232612,"down","IL18",3606,"0000165 // MAPK cascade // inferred from mutant phenotype /// 0001525 // angiogenesis // inferred from direct assay /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from direct assay /// 0006955 // immune response // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0009314 // response to radiation // inferred from electronic annotation /// 0009409 // response to cold // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0030155 // regulation of cell adhesion // inferred from direct assay /// 0030324 // lung development // inferred from electronic annotation /// 0030431 // sleep // inferred from sequence or structural similarity /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from direct assay /// 0032722 // positive regulation of chemokine production // inferred from electronic annotation /// 0032725 // positive regulation of granulocyte macrophage colony-stimulating factor production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0032731 // positive regulation of interleukin-1 beta production // inferred from electronic annotation /// 0032740 // positive regulation of interleukin-17 production // inferred from direct assay /// 0032757 // positive regulation of interleukin-8 production // inferred from electronic annotation /// 0032760 // positive regulation of tumor necrosis factor production // inferred from electronic annotation /// 0032819 // positive regulation of natural killer cell proliferation // inferred from direct assay /// 0032930 // positive regulation of superoxide anion generation // inferred from electronic annotation /// 0032967 // positive regulation of collagen biosynthetic process // inferred from electronic annotation /// 0034105 // positive regulation of tissue remodeling // inferred by curator /// 0042033 // chemokine biosynthetic process // traceable author statement /// 0042088 // T-helper 1 type immune response // inferred from direct assay /// 0042092 // type 2 immune response // traceable author statement /// 0042094 // interleukin-2 biosynthetic process // traceable author statement /// 0042095 // interferon-gamma biosynthetic process // traceable author statement /// 0042095 // interferon-gamma biosynthetic process // inferred from electronic annotation /// 0042104 // positive regulation of activated T cell proliferation // inferred from direct assay /// 0042231 // interleukin-13 biosynthetic process // traceable author statement /// 0042253 // granulocyte macrophage colony-stimulating factor biosynthetic process // traceable author statement /// 0043117 // positive regulation of vascular permeability // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0048546 // digestive tract morphogenesis // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred by curator /// 0050966 // detection of mechanical stimulus involved in sensory perception of pain // inferred from electronic annotation /// 0051142 // positive regulation of NK T cell proliferation // inferred from direct assay /// 0055093 // response to hyperoxia // inferred from electronic annotation /// 0060312 // regulation of blood vessel remodeling // inferred from electronic annotation /// 0070301 // cellular response to hydrogen peroxide // inferred from electronic annotation /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from electronic annotation /// 0071320 // cellular response to cAMP // inferred from electronic annotation /// 0071346 // cellular response to interferon-gamma // inferred from electronic annotation /// 0071356 // cellular response to tumor necrosis factor // inferred from electronic annotation /// 0071374 // cellular response to parathyroid hormone stimulus // inferred from electronic annotation /// 0071375 // cellular response to peptide hormone stimulus // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from direct assay /// 2000256 // positive regulation of male germ cell proliferation // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016324 // apical plasma membrane // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0005125 // cytokine activity // traceable author statement","chr11:112013973-112034840 (-) // 70.23 // q23.1"]
["11739992_at",-0.0032520294,0.0032520294,-0.034731388,0.09673166,0.03472638,-0.0034463406,0.45820844,0.15972129,-1.0383176,-0.054247748,1.0383176,"down","PDZD7",79955,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005929 // cilium // inferred from direct assay /// 0005929 // cilium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr10:102777089-102790901 (-) // 86.57 // q24.31"]
["11726243_a_at",-0.15811872,0.11472654,0.0045495033,0.12883043,-0.11339903,-0.0045495033,0.95902854,0.8830637,-1.0115551,-0.01657487,1.0115551,"down","ANKDD1A",348094,"0007165 // signal transduction // inferred from electronic annotation","","","chr15:65204100-65603681 (+) // 70.35 // q22.31"]
["11722121_a_at",0.28542137,-0.049646378,-7.43866e-5,0.28416443,7.43866e-5,-0.16805172,0.9361358,0.82448834,1.0279983,0.03983792,1.0279983,"up","PC",5091,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006090 // pyruvate metabolic process // inferred from electronic annotation /// 0006094 // gluconeogenesis // inferred from electronic annotation /// 0006094 // gluconeogenesis // traceable author statement /// 0006107 // oxaloacetate metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005625 // soluble fraction // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004075 // biotin carboxylase activity // inferred from electronic annotation /// 0004736 // pyruvate carboxylase activity // traceable author statement /// 0004736 // pyruvate carboxylase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // traceable author statement /// 0009374 // biotin binding // inferred from electronic annotation /// 0009374 // biotin binding // traceable author statement /// 0016874 // ligase activity // inferred from electronic annotation /// 0031406 // carboxylic acid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:66615703-66725815 (-) // 94.37 // q13.2"]
["11743919_a_at",0.18254375,0.0977211,-0.014066696,-0.057414055,0.014066696,-0.03922081,0.4126077,0.12862155,1.0839179,0.116255425,1.0839179,"up","MAP3K7",6885,"0000165 // MAPK cascade // inferred from electronic annotation /// 0000186 // activation of MAPKK activity // inferred from direct assay /// 0000186 // activation of MAPKK activity // traceable author statement /// 0000186 // activation of MAPKK activity // inferred from electronic annotation /// 0000187 // activation of MAPK activity // inferred from direct assay /// 0000187 // activation of MAPK activity // traceable author statement /// 0000187 // activation of MAPK activity // inferred from electronic annotation /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001841 // neural tube formation // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002726 // positive regulation of T cell cytokine production // inferred from mutant phenotype /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0007250 // activation of NF-kappaB-inducing kinase activity // inferred from mutant phenotype /// 0007252 // I-kappaB phosphorylation // inferred from direct assay /// 0007254 // JNK cascade // inferred from direct assay /// 0007254 // JNK cascade // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032743 // positive regulation of interleukin-2 production // inferred from mutant phenotype /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype /// 0043507 // positive regulation of JUN kinase activity // inferred from direct assay /// 0043507 // positive regulation of JUN kinase activity // inferred from mutant phenotype /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0050852 // T cell receptor signaling pathway // non-traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0050870 // positive regulation of T cell activation // inferred by curator /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // inferred from direct assay /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement","0005671 // Ada2/Gcn5/Ada3 transcription activator complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008385 // IkappaB kinase complex // inferred from physical interaction /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004708 // MAP kinase kinase activity // inferred from electronic annotation /// 0004709 // MAP kinase kinase kinase activity // inferred from direct assay /// 0004709 // MAP kinase kinase kinase activity // inferred from electronic annotation /// 0004709 // MAP kinase kinase kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:91225352-91297020 (-) // 99.7 // q15"]
["11730232_s_at",0.19215488,0.03695059,-0.03695011,0.06470394,-0.039682865,-0.22481108,0.61411375,0.2940568,1.0947857,0.13064848,1.0947857,"up","TIAL1",7073,"0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0006952 // defense response // traceable author statement","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // traceable author statement /// 0010494 // cytoplasmic stress granule // inferred from sequence or structural similarity","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement","chr10:121332837-121356540 (-) // 93.82 // q26.11"]
["11728597_a_at",-0.12890577,-0.1740799,0.002737999,0.2448473,-0.002737999,0.0870285,0.32397598,0.07952645,-1.156524,-0.20979513,1.156524,"down","ZNF222",7673,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:44529493-44537263 (+) // 92.27 // q13.31"]
["11754321_x_at",-0.060150146,-0.009753227,-0.057142258,0.033809662,0.009753227,0.11089897,0.2655721,0.053417582,-1.0672039,-0.093835816,1.0672039,"down","SLC12A9",56996,"0006810 // transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0015377 // cation:chloride symporter activity // traceable author statement","chr7:100456357-100464632 (+) // 91.95 // q22.1"]
["11734047_s_at",0.2679913,0.19244981,-0.14355111,-0.113716125,-0.0436666,0.0436666,0.66067004,0.3457888,1.1046087,0.14353533,1.1046087,"up","SDR16C5",195814,"0008152 // metabolic process // inferred from electronic annotation /// 0042572 // retinol metabolic process // inferred from direct assay /// 0042572 // retinol metabolic process // inferred from electronic annotation /// 0042574 // retinal metabolic process // inferred from direct assay /// 0043616 // keratinocyte proliferation // inferred from mutant phenotype /// 0050908 // detection of light stimulus involved in visual perception // non-traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004745 // retinol dehydrogenase activity // inferred from direct assay /// 0004745 // retinol dehydrogenase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation","chr8:57212207-57233241 (-) // 94.25 // q12.1"]
["11756139_s_at",0.035092354,-0.061613083,-0.104566574,0.0151844025,-0.0151844025,0.036623,0.5920958,0.27229205,-1.0395099,-0.055903487,1.0395099,"down","LOC728554 /// THOC3","728554 /// 84321","0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0046784 // intronless viral mRNA export from host nucleus // inferred from direct assay /// 0051028 // mRNA transport // inferred from electronic annotation","0000346 // transcription export complex // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation","chr5:177302533-177311269 (+) // 95.89 // q35.3 /// chr5:175386533-175395273 (-) // 96.02 // q35.2"]
["11738248_a_at",0.17721319,-0.0038452148,0.015496731,0.0038452148,-0.12464476,-0.12281513,0.38789502,0.11376526,1.1050869,0.14415985,1.1050869,"up","C11orf71",54494,"","","","chr11:114270710-114271139 (-) // 48.15 // q23.2"]
["11762283_x_at",0.33149672,0.10681105,0.094153404,-0.094153404,-0.29471207,-0.24950266,0.1476266,0.016447587,1.3106445,0.39027643,1.3106445,"up","TMX3",54495,"0006662 // glycerol ether metabolic process // inferred from electronic annotation /// 0045454 // cell redox homeostasis // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003756 // protein disulfide isomerase activity // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0015035 // protein disulfide oxidoreductase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation","chr18:66364175-66382295 (-) // 88.02 // q22.1"]
["11734921_a_at",-0.0024528503,-0.11773205,-0.2065711,0.013223171,0.0024523735,0.10296011,0.34837246,0.09146513,-1.1083887,-0.14846386,1.1083887,"down","ZNF276",92822,"0006281 // DNA repair // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006461 // protein complex assembly // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007140 // male meiosis // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0008585 // female gonad development // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0043240 // Fanconi anaemia nuclear complex // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:89787394-89807330 (+) // 89.68 // q24.3"]
["11735254_at",-0.028244019,-0.039259434,0.028244019,-0.047155857,0.09028101,0.18521643,0.5953574,0.2751577,-1.0637804,-0.0892004,1.0637804,"down","NEK8",284086,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0072372 // primary cilium // inferred from sequence or structural similarity /// 0072372 // primary cilium // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:27055807-27069784 (+) // 86.08 // q11.2"]
["11739085_a_at",0.40932274,0.16503811,0.030797005,-0.030797005,-0.32117653,-0.36593914,0.24224067,0.04463109,1.3575671,0.44102347,1.3575671,"up","PCID2",55795,"0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043488 // regulation of mRNA stability // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0048536 // spleen development // inferred from sequence or structural similarity /// 0090267 // positive regulation of mitotic cell cycle spindle assembly checkpoint // inferred from mutant phenotype /// 2000117 // negative regulation of cysteine-type endopeptidase activity // inferred from mutant phenotype","","","chr13:113831924-113863025 (-) // 91.72 // q34"]
["11732111_a_at",0.27186108,0.05041027,0.17329836,-0.050410748,-0.29233074,-0.36101627,0.18092789,0.024684139,1.3193029,0.39977583,1.3193029,"up","TNFRSF21",27242,"0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051402 // neuron apoptotic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:47199268-47277680 (-) // 92.51 // p12.3"]
["11741462_a_at",0.060438156,0.021204948,0.03693962,-0.021204948,-0.0987339,-0.09419918,0.14486714,0.015860425,1.0799068,0.11090683,1.0799068,"up","PRKAG1",5571,"0006110 // regulation of glycolysis // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007283 // spermatogenesis // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // traceable author statement /// 0046320 // regulation of fatty acid oxidation // traceable author statement /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051291 // protein heterooligomerization // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0031588 // AMP-activated protein kinase complex // inferred from sequence or structural similarity /// 0031588 // AMP-activated protein kinase complex // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004679 // AMP-activated protein kinase activity // inferred from sequence or structural similarity /// 0004691 // cAMP-dependent protein kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0008603 // cAMP-dependent protein kinase regulator activity // traceable author statement /// 0016208 // AMP binding // inferred from sequence or structural similarity /// 0016208 // AMP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from direct assay /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0043531 // ADP binding // inferred from sequence or structural similarity","chr12:49396131-49412531 (-) // 90.1 // q13.12"]
["11724872_a_at",0.17591,0.35638762,0.37308693,-0.17591047,-0.50669384,-0.3251691,0.08453397,0.0051067793,1.5558677,0.63771933,1.5558677,"up","CLDN2",9075,"0016338 // calcium-independent cell-cell adhesion // inferred from sequence or structural similarity /// 0016338 // calcium-independent cell-cell adhesion // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from sequence or structural similarity /// 0042802 // identical protein binding // inferred from electronic annotation","chrX:106163633-106174091 (+) // 84.73 // q22.3"]
["11718840_s_at",0.07312012,-0.0050401688,0.0050401688,-0.0058164597,0.0073804855,-0.1412878,0.575132,0.2552727,1.0504067,0.07094801,1.0504067,"up","PDHX",8050,"0006090 // pyruvate metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0010510 // regulation of acetyl-CoA biosynthetic process from pyruvate // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation","chr11:34937676-35017675 (+) // 98.17 // p13"]
["11736536_a_at",-0.17742443,0.01110363,0.20918608,-0.123267174,0.19375658,-0.01110363,0.99042434,0.97155684,-1.0038244,-0.005506852,1.0038244,"down","LEAP2",116842,"0042742 // defense response to bacterium // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","","chr5:132206869-132210700 (+) // 94.66 // q31.1"]
["11720645_at",-0.033515453,0.07972717,0.15920973,-0.24272966,-0.13940573,0.033515453,0.41944182,0.13284235,1.1365652,0.18468046,1.1365652,"up","SPTLC2",9517,"0006665 // sphingolipid metabolic process // traceable author statement /// 0006665 // sphingolipid metabolic process // inferred from electronic annotation /// 0006686 // sphingomyelin biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046511 // sphinganine biosynthetic process // inferred from electronic annotation /// 0046512 // sphingosine biosynthetic process // inferred from electronic annotation /// 0046513 // ceramide biosynthetic process // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0017059 // serine C-palmitoyltransferase complex // inferred from direct assay","0003824 // catalytic activity // inferred from electronic annotation /// 0004758 // serine C-palmitoyltransferase activity // inferred from direct assay /// 0004758 // serine C-palmitoyltransferase activity // inferred from electronic annotation /// 0004758 // serine C-palmitoyltransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation","chr14:77972340-78083116 (-) // 87.95 // q24.3"]
["11744080_x_at",-0.15714669,-0.0276227,0.19954443,-0.01336956,0.013369322,0.45309925,0.75192326,0.47088385,-1.1065801,-0.14610793,1.1065801,"down","PRSS1 /// PRSS2 /// PRSS3P2","154754 /// 5644 /// 5645","0006508 // proteolysis // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0007586 // digestion // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030307 // positive regulation of cell growth // traceable author statement /// 0030574 // collagen catabolic process // inferred from direct assay /// 0030574 // collagen catabolic process // inferred from mutant phenotype /// 0045087 // innate immune response // traceable author statement /// 0045785 // positive regulation of cell adhesion // traceable author statement","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from mutant phenotype /// 0005615 // extracellular space // inferred from electronic annotation /// 0031012 // extracellular matrix // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from direct assay /// 0004252 // serine-type endopeptidase activity // traceable author statement /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:142456512-142482415 (+) // 83.87 // q34"]
["11745848_a_at",0.1908741,0.053878784,0.054628372,-0.053878784,-0.24279404,-0.17272186,0.17485249,0.023097733,1.1943773,0.25625867,1.1943773,"up","TJP2",9414,"0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0035329 // hippo signaling cascade // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0005923 // tight junction // inferred from direct assay /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation","0004385 // guanylate kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr9:71819713-71869646 (+) // 99.79 // q21.11"]
["11762322_at",-0.16384363,0.0259161,0.027697086,-0.042018414,-0.0078139305,0.0078139305,0.90288776,0.74499696,-1.0158851,-0.022737259,1.0158851,"down","APOL4",80832,"0006629 // lipid metabolic process // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0042157 // lipoprotein metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from sequence or structural similarity","0008289 // lipid binding // inferred from electronic annotation","chr22:36593501-36600789 (-) // 60.98 // q12.3"]
["11757247_s_at",-0.11182451,-0.09339666,-0.07044554,0.07044554,0.12663555,0.13172626,0.039552536,0.0009349659,-1.1498864,-0.2014913,1.1498864,"down","OR6W1P",89883,"","","","chr7:142759380-142760882 (-) // 90.75 // q34"]
["11729868_x_at",-0.18570828,0.06902552,-0.06902528,-0.17081165,0.13829517,0.13422632,0.7644151,0.48967755,-1.0686623,-0.09580601,1.0686623,"down","UGT3A1",133688,"0008152 // metabolic process // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0015020 // glucuronosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016758 // transferase activity, transferring hexosyl groups // inferred from electronic annotation","chr5:35953191-35991499 (-) // 93.03 // p13.2"]
["11718835_x_at",0.62331486,-0.075913906,-0.107543945,0.36549807,0.075913906,-0.0844512,0.9732362,0.9240966,1.0193377,0.02763202,1.0193377,"up","PELP1",27043,"0006351 // transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0071339 // MLL1 complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr17:4574678-4607632 (-) // 92.21 // p13.2"]
["11746193_a_at",0.0059432983,-0.29664087,-0.11409235,0.18831158,0.12261486,-0.005943775,0.3393812,0.08701131,-1.1782053,-0.23659089,1.1782053,"down","METTL3",56339,"0001510 // RNA methylation // inferred from mutant phenotype /// 0001510 // RNA methylation // inferred from electronic annotation /// 0006139 // nucleobase-containing compound metabolic process // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0032259 // methylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016422 // mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity // inferred from mutant phenotype /// 0016422 // mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr14:21966305-21979482 (-) // 99.51 // q11.2"]
["11720655_s_at",-0.05235386,0.060368538,0.05235386,-0.10706043,0.08015537,-0.07462883,0.75346637,0.47321662,1.0381159,0.053967465,1.0381159,"up","BBX",56987,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr3:107241782-107530171 (+) // 98.21 // q13.12"]
["11760997_at",-0.05597353,-0.14867592,0.15984249,0.118177414,0.05597353,-0.05597353,0.8470902,0.631025,-1.0383754,-0.05432808,1.0383754,"down","ARHGAP27",201176,"0006897 // endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // inferred from sequence or structural similarity /// 0007165 // signal transduction // inferred from electronic annotation /// 0032855 // positive regulation of Rac GTPase activity // inferred from sequence or structural similarity /// 0043089 // positive regulation of Cdc42 GTPase activity // inferred from sequence or structural similarity /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from sequence or structural similarity /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from sequence or structural similarity /// 0030675 // Rac GTPase activator activity // inferred from sequence or structural similarity","chr17:43474753-43487765 (-) // 77.9 // q21.31"]
["11732850_x_at",-0.05837059,0.050299644,0.07471466,0.082146645,-0.050299644,-0.09494734,0.8044757,0.5542659,1.030431,0.043247946,1.030431,"up","CTAGE15P /// CTAGE4 /// CTAGE6P /// CTAGE8 /// CTAGE9","100128553 /// 100142659 /// 340307 /// 441294 /// 643854","","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr7:143880361-143883171 (+) // 98.87 // q35 /// chr7:143268675-143271467 (+) // 96.82 // q35 /// chr6:132029582-132032392 (-) // 99.29 // q23.2 /// chr7:143963768-143966578 (-) // 98.76 // q35 /// chr7:143452194-143454986 (-) // 96.68 // q35"]
["11716284_s_at",0.019208908,0.038413048,0.06980133,-0.019208908,-0.10507488,-0.0745697,0.16328594,0.020250974,1.0783002,0.108758934,1.0783002,"up","GLO1",2739,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // non-traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006749 // glutathione metabolic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from direct assay /// 0006916 // anti-apoptosis // inferred from mutant phenotype /// 0006916 // anti-apoptosis // traceable author statement /// 0009438 // methylglyoxal metabolic process // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement","0004462 // lactoylglutathione lyase activity // inferred from direct assay /// 0004462 // lactoylglutathione lyase activity // inferred from electronic annotation /// 0004462 // lactoylglutathione lyase activity // traceable author statement /// 0016829 // lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:38643715-38670952 (-) // 94.12 // p21.2"]
["11733574_at",-0.0995903,0.2040596,0.18270159,-0.08711243,-0.014266014,0.014265537,0.6100926,0.29003072,1.0903273,0.124761224,1.0903273,"up","PGBD4",161779,"","","","chr15:34394273-34396591 (+) // 81.47 // q14"]
["11745263_x_at",0.053071022,0.12328625,0.12013912,-0.053071022,-0.0810051,-0.08246517,0.059351683,0.0023243788,1.1258484,0.1710126,1.1258484,"up","SNX17",9784,"0006707 // cholesterol catabolic process // inferred by curator /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // non-traceable author statement /// 0006898 // receptor-mediated endocytosis // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016197 // endosomal transport // non-traceable author statement /// 0030100 // regulation of endocytosis // non-traceable author statement","0005622 // intracellular // non-traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005769 // early endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005102 // receptor binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from direct assay /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation /// 0050750 // low-density lipoprotein particle receptor binding // inferred from direct assay","chr2:27593362-27600100 (+) // 98.27 // p23.3"]
["11756435_a_at",-0.13398075,-0.073376656,-0.071826935,0.21523094,0.14138031,0.071826935,0.09763451,0.006947774,-1.17762,-0.23587415,1.17762,"down","C1orf85",112770,"0030522 // intracellular receptor mediated signaling pathway // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 2001141 // regulation of RNA biosynthetic process // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from sequence or structural similarity /// 0016021 // integral to membrane // inferred from electronic annotation","0000988 // protein binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from mutant phenotype /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay","chr1:156262486-156265468 (-) // 98.24 // q22"]
["11733815_at",-0.074804306,-0.014275074,0.24331379,-0.2944293,0.014275074,0.24833488,0.9072873,0.7542635,1.0439249,0.062017966,1.0439249,"up","RPL22L1",200916,"0006412 // translation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from electronic annotation","chr3:170582666-170588045 (-) // 76.44 // q26.2"]
["11734286_a_at",0.059802294,0,-0.010228395,-0.22901702,0,0.17382836,0.91803086,0.78321165,1.0245006,0.03492084,1.0245006,"up","COX7B2",170712,"","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005746 // mitochondrial respiratory chain // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004129 // cytochrome-c oxidase activity // inferred from electronic annotation","chr4:46736869-46847032 (-) // 75.3 // p12"]
["11715612_s_at",0.0065670013,-0.03091526,-0.0065670013,0.070096016,-0.034461975,0.041851044,0.65230644,0.336368,-1.0253621,-0.036133524,1.0253621,"down","TMX2",51075,"0045454 // cell redox homeostasis // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:57479994-57508445 (+) // 93.05 // q12.1"]
["11747619_a_at",-0.0033016205,-0.20358515,-0.16590214,0.0033016205,0.036813736,0.039307594,0.3111673,0.07352859,-1.1101366,-0.15073724,1.1101366,"down","CERS5",91012,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0030148 // sphingolipid biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046513 // ceramide biosynthetic process // inferred from direct assay /// 0046513 // ceramide biosynthetic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0050291 // sphingosine N-acyltransferase activity // inferred from direct assay /// 0050291 // sphingosine N-acyltransferase activity // inferred from electronic annotation","chr12:50523581-50561152 (-) // 90.2 // q13.12"]
["11734039_x_at",-0.048876047,-0.061564922,0.04998803,0.048876047,-0.11402774,0.061564922,0.92159927,0.7901555,-1.0132256,-0.01895537,1.0132256,"down","FEZ1",9638,"0006810 // transport // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0051654 // establishment of mitochondrion localization // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005813 // centrosome // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005080 // protein kinase C binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043015 // gamma-tubulin binding // inferred from electronic annotation","chr11:125358109-125366259 (-) // 66.77 // q24.2"]
["11764117_s_at",-0.070394516,-0.04620838,0.0034189224,0.23640633,0.29659748,-0.0034189224,0.3360693,0.0852505,-1.1601057,-0.21425626,1.1601057,"down","SMARCA5",8467,"0000183 // chromatin silencing at rDNA // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006302 // double-strand break repair // inferred from electronic annotation /// 0006333 // chromatin assembly or disassembly // inferred from electronic annotation /// 0006334 // nucleosome assembly // inferred from direct assay /// 0006334 // nucleosome assembly // traceable author statement /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006338 // chromatin remodeling // inferred from electronic annotation /// 0006338 // chromatin remodeling // traceable author statement /// 0006352 // transcription initiation, DNA-dependent // inferred from direct assay /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0009790 // embryo development // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016584 // nucleosome positioning // inferred from direct assay /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0043044 // ATP-dependent chromatin remodeling // inferred from mutant phenotype /// 0043044 // ATP-dependent chromatin remodeling // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation","0000793 // condensed chromosome // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005677 // chromatin silencing complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016585 // chromatin remodeling complex // inferred from electronic annotation /// 0016589 // NURF complex // inferred from direct assay /// 0031213 // RSF complex // inferred from physical interaction /// 0043596 // nuclear replication fork // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0004386 // helicase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016817 // hydrolase activity, acting on acid anhydrides // inferred from electronic annotation /// 0016818 // hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0031491 // nucleosome binding // inferred from electronic annotation /// 0042393 // histone binding // inferred from direct assay","chr4:144475139-144475524 (+) // 100.0 // q31.21"]
["11762407_at",-0.011747837,-0.049943924,-0.12924194,0.0522871,0.10850096,0.01174736,0.26454374,0.05299444,-1.0876063,-0.121156424,1.0876063,"down","IL18BP",10068,"0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0042088 // T-helper 1 type immune response // inferred from direct assay /// 0070301 // cellular response to hydrogen peroxide // inferred from electronic annotation /// 0071356 // cellular response to tumor necrosis factor // inferred from electronic annotation /// 1900116 // extracellular negative regulation of signal transduction // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0042007 // interleukin-18 binding // inferred from direct assay /// 0048019 // receptor antagonist activity // traceable author statement","chr11:71710108-71714799 (+) // 97.3 // q13.4"]
["11743093_a_at",0.061778307,0.3337841,-0.041446924,-0.09633398,0.041447163,-0.059960604,0.57996804,0.26014316,1.1144415,0.1563209,1.1144415,"up","LIN7A",8825,"0006461 // protein complex assembly // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0006887 // exocytosis // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0097016 // L27 domain binding // inferred from physical interaction","chr12:81190723-81331702 (-) // 90.48 // q21.31"]
["11731688_at",-0.0033705235,0.0033707619,0.25765133,-0.18124604,0.1155045,-0.0033705235,0.71761096,0.42143476,1.0784215,0.108921126,1.0784215,"up","SI",6476,"0005975 // carbohydrate metabolic process // traceable author statement /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009744 // response to sucrose stimulus // inferred from electronic annotation /// 0009750 // response to fructose stimulus // inferred from electronic annotation /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0033189 // response to vitamin A // inferred from electronic annotation /// 0042594 // response to starvation // inferred from electronic annotation /// 0044245 // polysaccharide digestion // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation","0005794 // Golgi apparatus // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005903 // brush border // inferred from electronic annotation /// 0005903 // brush border // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds // inferred from electronic annotation /// 0004558 // alpha-glucosidase activity // traceable author statement /// 0004564 // beta-fructofuranosidase activity // inferred from electronic annotation /// 0004574 // oligo-1,6-glucosidase activity // inferred from electronic annotation /// 0004575 // sucrose alpha-glucosidase activity // traceable author statement /// 0004575 // sucrose alpha-glucosidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr3:164696686-164796280 (-) // 98.59 // q26.1"]
["11760123_at",-0.11648035,0.122085094,-0.22684717,-0.22275782,0.11648035,0.29061937,0.77172124,0.500048,-1.0982411,-0.1351948,1.0982411,"down","PIAS3",10401,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0016925 // protein sumoylation // inferred from electronic annotation /// 0016925 // protein sumoylation // inferred from sequence or structural similarity /// 0033235 // positive regulation of protein sumoylation // inferred from direct assay /// 0045838 // positive regulation of membrane potential // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0015459 // potassium channel regulator activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019789 // SUMO ligase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from electronic annotation /// 0051059 // NF-kappaB binding // inferred from physical interaction","chr1:145575223-145584017 (+) // 90.5 // q21.1"]
["11760885_a_at",-0.25721598,0.4009366,-0.082196236,-0.0066394806,0.0066394806,0.14743376,0.9627439,0.8945795,-1.0200475,-0.0286364,1.0200475,"down","RXRB",6257,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0030522 // intracellular receptor mediated signaling pathway // inferred from direct assay /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0048384 // retinoic acid receptor signaling pathway // inferred from electronic annotation /// 0055012 // ventricular cardiac muscle cell differentiation // inferred from electronic annotation /// 0060038 // cardiac muscle cell proliferation // inferred from electronic annotation /// 0071300 // cellular response to retinoic acid // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0004886 // 9-cis retinoic acid receptor activity // inferred from electronic annotation /// 0004886 // 9-cis retinoic acid receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0030375 // thyroid hormone receptor coactivator activity // inferred from electronic annotation /// 0042809 // vitamin D receptor binding // inferred from electronic annotation /// 0042974 // retinoic acid receptor binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046966 // thyroid hormone receptor binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr6:33163848-33168635 (-) // 97.99 // p21.32"]
["11757022_x_at",0.67925406,0.2364335,0.06041956,-0.29836535,-0.060419798,-0.29890633,0.2649925,0.053186268,1.4586154,0.54459953,1.4586154,"up","TFPI2",7980,"0007596 // blood coagulation // inferred from electronic annotation /// 0007599 // hemostasis // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // traceable author statement","0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005201 // extracellular matrix structural constituent // traceable author statement /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr7:93515993-93518433 (-) // 98.75 // q21.3"]
["11759967_at",-0.6125846,-0.032487392,0.08962488,-0.13671732,0.04268408,0.032487392,0.7741517,0.5036257,-1.1208814,-0.16463368,1.1208814,"down","LOC100128816",100128816,"","","","chr12:3720052-3721169 (-) // 28.32 // p13.32"]
["11731325_a_at",-0.05854273,-0.13444018,0.010738611,-0.00861764,0.11191726,0.008617401,0.45433387,0.15676105,-1.0703286,-0.098053776,1.0703286,"down","CAPN8",388743,"0006508 // proteolysis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation","0004198 // calcium-dependent cysteine-type endopeptidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr1:223714978-223853436 (-) // 85.64 // q41"]
["11721813_at",-0.088311195,0.018951893,-0.018253803,-0.16697645,0.018253326,0.113276005,0.9476061,0.85314286,-1.0121258,-0.017388688,1.0121258,"down","VWA1",64856,"0030198 // extracellular matrix organization // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005614 // interstitial matrix // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","","chr1:1370902-1378262 (+) // 96.77 // p36.33"]
["11755274_a_at",0.26177645,-0.028514862,0.0255754,-0.06119919,-0.0255754,0.25883722,0.9427106,0.8407106,1.0202515,0.028924849,1.0202515,"up","CATSPERD",257062,"0001539 // ciliary or flagellar motility // inferred from sequence or structural similarity /// 0001539 // ciliary or flagellar motility // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from sequence or structural similarity /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030317 // sperm motility // inferred from sequence or structural similarity /// 0030317 // sperm motility // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019861 // flagellum // inferred from electronic annotation /// 0020017 // flagellar membrane // inferred from sequence or structural similarity /// 0020017 // flagellar membrane // inferred from electronic annotation /// 0036128 // CatSper complex // inferred from sequence or structural similarity /// 0042995 // cell projection // inferred from electronic annotation","","chr19:5753644-5778744 (+) // 86.73 // p13.3"]
["11729487_at",-0.16366911,-0.029351711,0.12413502,-0.29104996,0.029351234,0.15449476,0.9787073,0.9389012,1.0088927,0.012772682,1.0088927,"up","RGS6",9628,"0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // non-traceable author statement /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // traceable author statement /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0038032 // termination of G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // not recorded /// 0043547 // positive regulation of GTPase activity // traceable author statement /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation","0005737 // cytoplasm // not recorded /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005834 // heterotrimeric G-protein complex // inferred from electronic annotation /// 0005886 // plasma membrane // not recorded /// 0016020 // membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // not recorded /// 0005096 // GTPase activator activity // traceable author statement","chr14:72399754-73033237 (+) // 97.11 // q24.2"]
["11741408_a_at",0.008775234,0.028486729,-0.021560907,-0.008775473,-0.018215895,0.12430811,0.8320637,0.6030664,-1.0190362,-0.027205264,1.0190362,"down","NEFM",4741,"0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0008088 // axon cargo transport // inferred from electronic annotation /// 0031133 // regulation of axon diameter // inferred from electronic annotation /// 0045104 // intermediate filament cytoskeleton organization // inferred from electronic annotation /// 0060052 // neurofilament cytoskeleton organization // inferred from electronic annotation","0005856 // cytoskeleton // inferred from electronic annotation /// 0005882 // intermediate filament // inferred from electronic annotation /// 0005883 // neurofilament // inferred from electronic annotation /// 0005883 // neurofilament // traceable author statement /// 0030424 // axon // traceable author statement /// 0030424 // axon // inferred from electronic annotation /// 0031594 // neuromuscular junction // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr8:24772454-24776606 (+) // 76.74 // p21.2"]
["11726289_at",0.08778095,0.026519775,0.038686752,-0.026519775,-0.034418106,-0.14681053,0.2556292,0.049397327,1.0869197,0.120245315,1.0869197,"up","GRAMD3",65983,"","","","chr5:125758833-125830216 (+) // 95.05 // q23.2"]
["11758955_at",-0.057226658,-0.017395496,0.019254684,0.017395496,-0.04115534,0.124742985,0.6902353,0.3840277,-1.0367851,-0.052116927,1.0367851,"down","LGALS8",3964,"","0005615 // extracellular space // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0030246 // carbohydrate binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // traceable author statement","chr1:236686898-236714814 (+) // 97.01 // q43"]
["11733338_x_at",-0.10248709,-0.23279858,-0.30436993,0.10248661,0.14994764,0.11882353,0.08485681,0.005155895,-1.2631019,-0.33697107,1.2631019,"down","FANCE",2178,"0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0043240 // Fanconi anaemia nuclear complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr6:35420115-35434879 (+) // 85.74 // p21.31"]
["11722806_at",0.17852879,0.020547867,-0.04644966,-0.09870815,-0.020547867,0.06788635,0.74144256,0.45480716,1.0482616,0.06799885,1.0482616,"up","RAB35",11021,"0000910 // cytokinesis // inferred from mutant phenotype /// 0006184 // GTP catabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0008104 // protein localization // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0016197 // endosomal transport // inferred from mutant phenotype","0005739 // mitochondrion // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005905 // coated pit // inferred from direct assay /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0031253 // cell projection membrane // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0045171 // intercellular bridge // inferred from direct assay /// 0045334 // clathrin-coated endocytic vesicle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from direct assay","chr12:120532902-120554643 (-) // 96.35 // q24.23"]
["11740008_s_at",-0.25340557,0.20324183,0.033468008,-0.30157614,-0.033468008,0.2030673,0.9482469,0.85521716,1.0269935,0.03842707,1.0269935,"up","CHRFAM7A /// CHRNA7","1139 /// 89832","0000187 // activation of MAPK activity // inferred from direct assay /// 0001666 // response to hypoxia // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // non-traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from direct assay /// 0006816 // calcium ion transport // inferred from mutant phenotype /// 0006874 // cellular calcium ion homeostasis // inferred from mutant phenotype /// 0007165 // signal transduction // inferred from direct assay /// 0007268 // synaptic transmission // traceable author statement /// 0007613 // memory // non-traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0032720 // negative regulation of tumor necrosis factor production // inferred from direct assay /// 0032720 // negative regulation of tumor necrosis factor production // inferred from mutant phenotype /// 0035094 // response to nicotine // inferred from direct assay /// 0042221 // response to chemical stimulus // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype /// 0050890 // cognition // inferred from mutant phenotype /// 0050890 // cognition // non-traceable author statement","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005892 // acetylcholine-gated channel complex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0001540 // beta-amyloid binding // inferred from physical interaction /// 0004872 // receptor activity // inferred from electronic annotation /// 0004889 // acetylcholine-activated cation-selective channel activity // inferred from direct assay /// 0004889 // acetylcholine-activated cation-selective channel activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0015464 // acetylcholine receptor activity // inferred from direct assay /// 0015643 // toxin binding // inferred from direct assay /// 0017081 // chloride channel regulator activity // inferred from direct assay /// 0042166 // acetylcholine binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from direct assay","chr15:30652770-30685864 (-) // 93.01 // q13.2"]
["11740395_a_at",0.18943596,-0.0050702095,0.0050702095,-0.20406485,0.01210022,-0.24133682,0.3805785,0.10949338,1.1547489,0.2075792,1.1547489,"up","FGFR2",2263,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0001525 // angiogenesis // inferred from sequence or structural similarity /// 0001657 // ureteric bud development // inferred from sequence or structural similarity /// 0001701 // in utero embryonic development // inferred from sequence or structural similarity /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from sequence or structural similarity /// 0003148 // outflow tract septum morphogenesis // inferred from sequence or structural similarity /// 0003149 // membranous septum morphogenesis // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007267 // cell-cell signaling // inferred from sequence or structural similarity /// 0007409 // axonogenesis // inferred from sequence or structural similarity /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from genetic interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from physical interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // non-traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0008589 // regulation of smoothened signaling pathway // inferred from sequence or structural similarity /// 0009791 // post-embryonic development // inferred from sequence or structural similarity /// 0009880 // embryonic pattern specification // inferred from sequence or structural similarity /// 0009887 // organ morphogenesis // inferred from sequence or structural similarity /// 0010453 // regulation of cell fate commitment // inferred from sequence or structural similarity /// 0010518 // positive regulation of phospholipase activity // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016331 // morphogenesis of embryonic epithelium // inferred from sequence or structural similarity /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0021769 // orbitofrontal cortex development // inferred from sequence or structural similarity /// 0021847 // ventricular zone neuroblast division // inferred from sequence or structural similarity /// 0021860 // pyramidal neuron development // inferred from sequence or structural similarity /// 0022612 // gland morphogenesis // inferred from sequence or structural similarity /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from sequence or structural similarity /// 0030282 // bone mineralization // inferred from sequence or structural similarity /// 0030324 // lung development // inferred from sequence or structural similarity /// 0030855 // epithelial cell differentiation // inferred from sequence or structural similarity /// 0030901 // midbrain development // inferred from sequence or structural similarity /// 0030916 // otic vesicle formation // inferred from sequence or structural similarity /// 0031069 // hair follicle morphogenesis // inferred from sequence or structural similarity /// 0032808 // lacrimal gland development // inferred from sequence or structural similarity /// 0033688 // regulation of osteoblast proliferation // traceable author statement /// 0035264 // multicellular organism growth // inferred from sequence or structural similarity /// 0035265 // organ growth // inferred from sequence or structural similarity /// 0035602 // fibroblast growth factor receptor signaling pathway involved in negative regulation of apoptotic process in bone marrow // inferred from sequence or structural similarity /// 0035603 // fibroblast growth factor receptor signaling pathway involved in hemopoiesis // inferred from sequence or structural similarity /// 0035604 // fibroblast growth factor receptor signaling pathway involved in positive regulation of cell proliferation in bone marrow // inferred from sequence or structural similarity /// 0035607 // fibroblast growth factor receptor signaling pathway involved in orbitofrontal cortex development // inferred from sequence or structural similarity /// 0040014 // regulation of multicellular organism growth // inferred from sequence or structural similarity /// 0040036 // regulation of fibroblast growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0042472 // inner ear morphogenesis // inferred from sequence or structural similarity /// 0042476 // odontogenesis // inferred from sequence or structural similarity /// 0043410 // positive regulation of MAPK cascade // inferred from mutant phenotype /// 0045165 // cell fate commitment // inferred from sequence or structural similarity /// 0045667 // regulation of osteoblast differentiation // traceable author statement /// 0045787 // positive regulation of cell cycle // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048286 // lung alveolus development // inferred from sequence or structural similarity /// 0048557 // embryonic digestive tract morphogenesis // inferred from sequence or structural similarity /// 0048562 // embryonic organ morphogenesis // inferred from sequence or structural similarity /// 0048565 // digestive tract development // inferred from sequence or structural similarity /// 0048568 // embryonic organ development // inferred from sequence or structural similarity /// 0048608 // reproductive structure development // inferred from sequence or structural similarity /// 0048705 // skeletal system morphogenesis // traceable author statement /// 0048730 // epidermis morphogenesis // inferred from sequence or structural similarity /// 0048755 // branching morphogenesis of a nerve // inferred from sequence or structural similarity /// 0048762 // mesenchymal cell differentiation // inferred from sequence or structural similarity /// 0050679 // positive regulation of epithelial cell proliferation // inferred from sequence or structural similarity /// 0051150 // regulation of smooth muscle cell differentiation // inferred from sequence or structural similarity /// 0051781 // positive regulation of cell division // inferred from sequence or structural similarity /// 0055010 // ventricular cardiac muscle tissue morphogenesis // inferred from sequence or structural similarity /// 0060045 // positive regulation of cardiac muscle cell proliferation // inferred from sequence or structural similarity /// 0060174 // limb bud formation // inferred from sequence or structural similarity /// 0060348 // bone development // inferred from sequence or structural similarity /// 0060349 // bone morphogenesis // inferred from sequence or structural similarity /// 0060442 // branching involved in prostate gland morphogenesis // inferred from sequence or structural similarity /// 0060445 // branching involved in salivary gland morphogenesis // inferred from sequence or structural similarity /// 0060449 // bud elongation involved in lung branching // inferred from sequence or structural similarity /// 0060463 // lung lobe morphogenesis // inferred from sequence or structural similarity /// 0060484 // lung-associated mesenchyme development // inferred from sequence or structural similarity /// 0060501 // positive regulation of epithelial cell proliferation involved in lung morphogenesis // inferred from sequence or structural similarity /// 0060512 // prostate gland morphogenesis // inferred from sequence or structural similarity /// 0060523 // prostate epithelial cord elongation // inferred from sequence or structural similarity /// 0060527 // prostate epithelial cord arborization involved in prostate glandular acinus morphogenesis // inferred from sequence or structural similarity /// 0060529 // squamous basal epithelial stem cell differentiation involved in prostate gland acinus development // inferred from sequence or structural similarity /// 0060595 // fibroblast growth factor receptor signaling pathway involved in mammary gland specification // inferred from sequence or structural similarity /// 0060601 // lateral sprouting from an epithelium // inferred from sequence or structural similarity /// 0060615 // mammary gland bud formation // inferred from sequence or structural similarity /// 0060664 // epithelial cell proliferation involved in salivary gland morphogenesis // inferred from sequence or structural similarity /// 0060667 // branch elongation involved in salivary gland morphogenesis // inferred from sequence or structural similarity /// 0060670 // branching involved in labyrinthine layer morphogenesis // inferred from sequence or structural similarity /// 0060687 // regulation of branching involved in prostate gland morphogenesis // inferred from sequence or structural similarity /// 0060688 // regulation of morphogenesis of a branching structure // inferred from sequence or structural similarity /// 0060915 // mesenchymal cell differentiation involved in lung development // inferred from sequence or structural similarity /// 0060916 // mesenchymal cell proliferation involved in lung development // inferred from sequence or structural similarity /// 0070372 // regulation of ERK1 and ERK2 cascade // inferred from sequence or structural similarity /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from sequence or structural similarity /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from sequence or structural similarity","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0005938 // cell cortex // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0060076 // excitatory synapse // inferred from sequence or structural similarity","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // non-traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from direct assay /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from physical interaction /// 0005007 // fibroblast growth factor-activated receptor activity // non-traceable author statement /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017134 // fibroblast growth factor binding // inferred from direct assay /// 0017134 // fibroblast growth factor binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction","chr10:123237844-123357973 (-) // 95.96 // q26.13"]
["11741656_a_at",-0.19440031,0.06700182,-0.06700182,-0.3091073,0.14970112,0.07601833,0.93824977,0.8295267,-1.0259811,-0.03700411,1.0259811,"down","SLCO1C1",53919,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015721 // bile acid and bile salt transport // inferred from electronic annotation /// 0043252 // sodium-independent organic anion transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0015125 // bile acid transmembrane transporter activity // inferred from electronic annotation","chr12:20848288-20906318 (+) // 96.11 // p12.2"]
["11755022_a_at",-0.05413723,-0.0109272,0.0109272,0.1611166,0.13347626,-0.09350014,0.6738689,0.3627528,-1.060744,-0.08507658,1.060744,"down","ARL6IP1",23204,"","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr16:18802990-18812866 (-) // 98.6 // p12.3"]
["11717816_at",0.025368214,-0.10460949,0.15136957,0.15292645,-0.3041458,-0.025367737,0.83777857,0.61479497,1.0591487,0.082905106,1.0591487,"up","ZBTB5",9925,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:37438108-37465452 (-) // 98.94 // p13.2"]
["11745805_a_at",-0.32760477,-0.030425549,-0.19840813,0.030425549,0.3579936,0.41331434,0.22078314,0.037115272,-1.368622,-0.45272398,1.368622,"down","AMMECR1L",83607,"","","","chr2:128619203-128643635 (-) // 96.73 // q14.3"]
["11749983_a_at",-0.24171448,0.038673878,-0.038673878,0.09283304,0.14039993,-0.1349001,0.6989863,0.39548233,-1.0817366,-0.1133492,1.0817366,"down","SERPINB5",5268,"0002009 // morphogenesis of an epithelium // inferred from electronic annotation /// 0006928 // cellular component movement // traceable author statement /// 0010951 // negative regulation of endopeptidase activity // not recorded /// 0030162 // regulation of proteolysis // not recorded /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0050678 // regulation of epithelial cell proliferation // inferred from electronic annotation /// 0060512 // prostate gland morphogenesis // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0004867 // serine-type endopeptidase inhibitor activity // not recorded /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr18:61144194-61171020 (+) // 92.92 // q21.33"]
["11756561_a_at",0.11626434,0.018101692,-0.0021352768,0.0021352768,-0.055197716,-0.2566929,0.4646214,0.16405429,1.1075169,0.14732869,1.1075169,"up","MED20",9477,"0006351 // transcription, DNA-dependent // non-traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016592 // mediator complex // non-traceable author statement /// 0016592 // mediator complex // inferred from electronic annotation","0001104 // RNA polymerase II transcription cofactor activity // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr6:41873092-41874670 (-) // 51.33 // p21.1"]
["11740248_s_at",0.073079586,-0.23718071,-0.073079586,0.52953196,0.39134407,-0.085278034,0.45648563,0.15863095,-1.2812864,-0.35759294,1.2812864,"down","SPAG1",6674,"0007338 // single fertilization // inferred from electronic annotation /// 0007338 // single fertilization // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr8:101170133-101254130 (+) // 94.22 // q22.2"]
["11748992_a_at",0.009958744,-0.025028706,0.052759647,0.42084742,-0.070821285,-0.009958744,0.8044757,0.5543119,-1.0723624,-0.10079257,1.0723624,"down","PFAS",5198,"0006144 // purine base metabolic process // traceable author statement /// 0006164 // purine nucleotide biosynthetic process // inferred from electronic annotation /// 0006189 // 'de novo' IMP biosynthetic process // inferred from electronic annotation /// 0006189 // 'de novo' IMP biosynthetic process // non-traceable author statement /// 0006541 // glutamine metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009168 // purine ribonucleoside monophosphate biosynthetic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement","0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004642 // phosphoribosylformylglycinamidine synthase activity // inferred from direct assay /// 0004642 // phosphoribosylformylglycinamidine synthase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation","chr17:8150935-8172675 (+) // 95.53 // p13.1"]
["11753306_a_at",-0.24487591,0.06811476,0.18034887,-0.063325405,0.039961576,-0.039961338,0.95505035,0.87308514,1.0155803,0.02230431,1.0155803,"up","EBF2",64641,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:25702124-25745432 (-) // 99.71 // p21.2"]
["11731079_s_at",-0.38263655,-0.01362896,0.033451557,-0.3027141,0.01362896,0.10413003,0.90908945,0.75881684,-1.0419501,-0.059286196,1.0419501,"down","HCAR1",27198,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from direct assay","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation","chr12:123212152-123215129 (-) // 84.4 // q24.31"]
["11750802_x_at",0.0017786026,0.19156456,0.1727686,-0.08429146,-0.0017786026,-0.12383652,0.2625005,0.052311614,1.142351,0.19200604,1.142351,"up","LIMK2",3985,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016310 // phosphorylation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0042325 // regulation of phosphorylation // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005801 // cis-Golgi network // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr22:31608207-31674574 (+) // 99.91 // q12.2"]
["11746996_a_at",0.0012917519,-0.0012917519,0.056828022,0.10627365,-0.04034567,-0.009257317,0.99963355,0.9991883,1.0000364,5.2453754e-5,1.0000364,"up","CCDC7",221016,"","","","chr10:32735314-32802192 (+) // 50.55 // p11.22"]
["11731532_at",-0.056155205,-0.16587543,-0.046526432,0.0972209,0.17709875,0.046526432,0.17028174,0.021921683,-1.1458893,-0.19646765,1.1458893,"down","MTPAP",55149,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006378 // mRNA polyadenylation // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0071044 // histone mRNA catabolic process // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0002134 // UTP binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0004652 // polynucleotide adenylyltransferase activity // inferred from direct assay /// 0004652 // polynucleotide adenylyltransferase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:30598730-30638269 (-) // 65.6 // p11.23"]
["11763363_x_at",-0.048145294,0.03350544,0.08890438,-0.43801785,0.29101944,-0.03350544,0.887333,0.712507,1.060631,0.08492287,1.060631,"up","ZKSCAN5",23660,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:99102870-99132297 (+) // 84.09 // q22.1"]
["11717491_a_at",0.207098,0.0019817352,-0.0019817352,0.010464668,-0.13161564,-0.1007576,0.45051363,0.15385246,1.1042005,0.14300214,1.1042005,"up","DYNLRB1",83658,"0006810 // transport // inferred from electronic annotation /// 0007018 // microtubule-based movement // non-traceable author statement /// 0007632 // visual behavior // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005868 // cytoplasmic dynein complex // inferred from sequence or structural similarity /// 0005868 // cytoplasmic dynein complex // non-traceable author statement /// 0005868 // cytoplasmic dynein complex // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0030286 // dynein complex // inferred from electronic annotation","0003774 // motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from electronic annotation","chr20:33104226-33128762 (+) // 75.48 // q11.22"]
["11756304_x_at",0.007628441,-0.012889862,-0.003186226,0.003186226,0.0044698715,-0.027243614,0.9139776,0.7713085,1.0025772,0.00371331,1.0025772,"up","CSNK1A1",1452,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005847 // mRNA cleavage and polyadenylation specificity factor complex // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr5:148875616-148929890 (-) // 99.89 // q32"]
["11737853_at",0.076366425,0.06291866,-0.06291866,-0.1422348,-0.15822554,0.2852316,0.9464111,0.8504583,1.0213885,0.030531764,1.0213885,"up","TNFSF18",8995,"0002309 // T cell proliferation involved in immune response // inferred from sequence or structural similarity /// 0002309 // T cell proliferation involved in immune response // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0033209 // tumor necrosis factor-mediated signaling pathway // inferred from sequence or structural similarity /// 0033209 // tumor necrosis factor-mediated signaling pathway // inferred from electronic annotation /// 0042129 // regulation of T cell proliferation // inferred from sequence or structural similarity /// 0042129 // regulation of T cell proliferation // inferred from electronic annotation /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from sequence or structural similarity /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from electronic annotation","0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from sequence or structural similarity /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005102 // receptor binding // traceable author statement /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005164 // tumor necrosis factor receptor binding // inferred from electronic annotation /// 0032813 // tumor necrosis factor receptor superfamily binding // inferred from sequence or structural similarity /// 0032813 // tumor necrosis factor receptor superfamily binding // inferred from electronic annotation","chr1:173009099-173020103 (-) // 99.55 // q25.1"]
["11720644_a_at",-0.22293043,-0.027683258,0.027683258,-0.094774246,0.063821316,0.2113061,0.6313884,0.31304163,-1.0976574,-0.13442789,1.0976574,"down","PECAM1",5175,"0002576 // platelet degranulation // traceable author statement /// 0006909 // phagocytosis // inferred from direct assay /// 0006909 // phagocytosis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008037 // cell recognition // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0050904 // diapedesis // inferred from direct assay /// 0072011 // glomerular endothelium development // inferred from expression pattern","0005615 // extracellular space // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031092 // platelet alpha granule membrane // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr17:62399863-62407083 (-) // 28.24 // q23.3"]
["11741010_a_at",0.0719471,0.0058784485,-0.15536308,-0.0057840347,0.0057840347,-0.18265533,0.890918,0.7197146,1.0245848,0.03503935,1.0245848,"up","MFN2",9927,"0001825 // blastocyst formation // inferred from electronic annotation /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006626 // protein targeting to mitochondrion // inferred from direct assay /// 0007006 // mitochondrial membrane organization // inferred from direct assay /// 0007050 // cell cycle arrest // inferred from sequence or structural similarity /// 0007596 // blood coagulation // traceable author statement /// 0008053 // mitochondrial fusion // inferred from electronic annotation /// 0008053 // mitochondrial fusion // non-traceable author statement /// 0046580 // negative regulation of Ras protein signal transduction // inferred from direct assay /// 0048593 // camera-type eye morphogenesis // inferred from electronic annotation /// 0048662 // negative regulation of smooth muscle cell proliferation // inferred from sequence or structural similarity /// 0051646 // mitochondrion localization // inferred from direct assay","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0015630 // microtubule cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031306 // intrinsic to mitochondrial outer membrane // inferred from sequence or structural similarity","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr1:12040237-12073571 (+) // 99.78 // p36.22"]
["11745736_a_at",-0.0134887695,0.08738041,-0.04970455,-0.035705566,0.0134887695,0.12312508,0.8829532,0.7026445,-1.0178844,-0.025573688,1.0178844,"down","ACADVL",37,"0001659 // temperature homeostasis // inferred from sequence or structural similarity /// 0001659 // temperature homeostasis // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006635 // fatty acid beta-oxidation // traceable author statement /// 0006635 // fatty acid beta-oxidation // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0015980 // energy derivation by oxidation of organic compounds // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0033539 // fatty acid beta-oxidation using acyl-CoA dehydrogenase // inferred from sequence or structural similarity /// 0033539 // fatty acid beta-oxidation using acyl-CoA dehydrogenase // inferred from electronic annotation /// 0042760 // very long-chain fatty acid catabolic process // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045717 // negative regulation of fatty acid biosynthetic process // inferred from sequence or structural similarity /// 0045717 // negative regulation of fatty acid biosynthetic process // inferred from electronic annotation /// 0046322 // negative regulation of fatty acid oxidation // inferred from sequence or structural similarity /// 0046322 // negative regulation of fatty acid oxidation // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0090181 // regulation of cholesterol metabolic process // inferred from sequence or structural similarity /// 0090181 // regulation of cholesterol metabolic process // inferred from electronic annotation","0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0042645 // mitochondrial nucleoid // inferred from direct assay","0000062 // fatty-acyl-CoA binding // inferred from electronic annotation /// 0003995 // acyl-CoA dehydrogenase activity // traceable author statement /// 0003995 // acyl-CoA dehydrogenase activity // inferred from electronic annotation /// 0004466 // long-chain-acyl-CoA dehydrogenase activity // traceable author statement /// 0004466 // long-chain-acyl-CoA dehydrogenase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016627 // oxidoreductase activity, acting on the CH-CH group of donors // inferred from electronic annotation /// 0017099 // very-long-chain-acyl-CoA dehydrogenase activity // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation","chr17:7123155-7128584 (+) // 90.38 // p13.1"]
["11731422_s_at",0.0049726963,0.11043692,0.027343988,-0.148355,-0.0049726963,-0.09816861,0.29903585,0.06775594,1.0953687,0.13141662,1.0953687,"up","FCGR3A",2214,"0006955 // immune response // traceable author statement /// 0050776 // regulation of immune response // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0019864 // IgG binding // inferred from electronic annotation","chr1:161511552-161519893 (-) // 92.83 // q23.3 /// chr1:161592989-161601252 (-) // 91.06 // q23.3"]
["11720429_at",-0.011412144,-0.14597034,-0.10484457,0.1289506,0.011412144,0.015076637,0.29546684,0.065968364,-1.1013112,-0.1392222,1.1013112,"down","CDC40",51362,"0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","","chr6:110501623-110553435 (+) // 91.14 // q21"]
["11717796_a_at",-0.027442932,-0.12290764,-0.032611847,0.08616829,0.035295486,0.027442932,0.22129269,0.0373417,-1.0796944,-0.11062301,1.0796944,"down","ZDHHC3",51304,"0006605 // protein targeting // inferred from electronic annotation /// 0018345 // protein palmitoylation // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0016409 // palmitoyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:44956752-45017674 (-) // 82.2 // p21.31"]
["11730881_a_at",-0.08560419,-0.10396719,0.08560419,-0.13710165,0.28985643,0.14211702,0.69742495,0.3929416,-1.0965308,-0.13294633,1.0965308,"down","NEBL",10529,"0071691 // cardiac muscle thin filament assembly // inferred from mutant phenotype","0001725 // stress fiber // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030018 // Z disc // inferred from direct assay /// 0031674 // I band // non-traceable author statement","0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005523 // tropomyosin binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from direct assay /// 0008092 // cytoskeletal protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008307 // structural constituent of muscle // non-traceable author statement /// 0031005 // filamin binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from direct assay","chr10:21068904-21186531 (-) // 98.58 // p12.31"]
["11733584_a_at",0.067209244,0.056171894,-0.2562623,-0.056171894,-0.10080147,0.10611248,0.9405776,0.83533823,-1.0191314,-0.027340107,1.0191314,"down","TM4SF19 /// TM4SF19-TCTEX1D2","100534611 /// 116211","","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:196050418-196065258 (-) // 92.6 // q29"]
["11754532_a_at",-0.06680298,0.026406288,0.03091669,-0.06350374,-0.026406288,0.20062304,0.86934596,0.6741848,-1.0281596,-0.040064257,1.0281596,"down","C1orf127",148345,"","","","chr1:11006531-11009808 (-) // 86.34 // p36.22"]
["11761633_a_at",0,0.15395856,-0.005189419,-0.005189419,0.15206957,0,0.9975654,0.993565,1.0004365,0.00062966306,1.0004365,"up","SLC37A3",84255,"0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation","chr7:140051319-140098304 (-) // 92.27 // q34"]
["11723735_a_at",-0.0012454987,-0.03221321,0.017341614,-0.044211388,0.0012454987,0.03483963,0.97415555,0.92638946,-1.001848,-0.0026636147,1.001848,"down","RNF216",54476,"0006915 // apoptotic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0032648 // regulation of interferon-beta production // inferred from direct assay /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0050691 // regulation of defense response to virus by host // inferred from direct assay /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:5659263-5821370 (-) // 95.23 // p22.1"]
["11728001_a_at",-0.29067945,0.08224344,0.034626484,-0.2770648,0.0839839,-0.034626484,0.9695675,0.9150426,1.0125309,0.017965969,1.0125309,"up","TMEM114",283953,"","0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation","chr16:8619502-8622226 (-) // 67.05 // p13.2"]
["11721564_a_at",0.24929667,0.19585991,-0.0947361,-0.016503334,-0.20198107,0.016503334,0.53557074,0.21975961,1.1361346,0.1841338,1.1361346,"up","PLA2G4C",8605,"0006644 // phospholipid metabolic process // traceable author statement /// 0006954 // inflammatory response // non-traceable author statement /// 0007567 // parturition // non-traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009395 // phospholipid catabolic process // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0019369 // arachidonic acid metabolic process // non-traceable author statement /// 0035556 // intracellular signal transduction // non-traceable author statement /// 0046475 // glycerophospholipid catabolic process // inferred from direct assay","0005622 // intracellular // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0004620 // phospholipase activity // inferred from electronic annotation /// 0004623 // phospholipase A2 activity // inferred from electronic annotation /// 0005543 // phospholipid binding // non-traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0047499 // calcium-independent phospholipase A2 activity // inferred from direct assay","chr19:48551099-48614109 (-) // 91.89 // q13.33"]
["11723556_x_at",0.11536789,-0.18501854,-0.11536789,0.627903,0.29059696,-0.13611603,0.5678238,0.24852283,-1.2504674,-0.32246748,1.2504674,"down","DCAF16",54876,"0016567 // protein ubiquitination // inferred by curator /// 0016567 // protein ubiquitination // inferred from electronic annotation","0080008 // CUL4-RING ubiquitin ligase complex // inferred from direct assay","","chr4:17802277-17812381 (-) // 80.07 // p15.31"]
["11724699_a_at",-0.07161379,0.07972956,-0.06600332,-0.13526535,0.0660038,0.19392014,0.8319493,0.60278636,-1.0430793,-0.060848784,1.0430793,"down","ARHGEF37",389337,"0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation","chr5:148961005-149014531 (+) // 86.01 // q32"]
["11744024_a_at",-0.04852867,-0.15112782,-0.23995113,0.21674061,0.04852867,0.110248566,0.16784447,0.021336075,-1.2072366,-0.2717085,1.2072366,"down","MARS",4141,"0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006418 // tRNA aminoacylation for protein translation // inferred from electronic annotation /// 0006431 // methionyl-tRNA aminoacylation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000049 // tRNA binding // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004825 // methionine-tRNA ligase activity // traceable author statement /// 0004825 // methionine-tRNA ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation","chr12:57881689-57910432 (+) // 90.27 // q13.3"]
["11731890_a_at",0.24429226,-0.18658543,-0.030797958,-0.15490055,0.058312416,0.030797958,0.942075,0.8391138,1.021649,0.030899629,1.021649,"up","ADAMTS16",170690,"0006508 // proteolysis // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:5140442-5320412 (+) // 99.86 // p15.32"]
["11758413_s_at",-0.19541597,0.04134226,-0.24037337,0.24037409,-0.04134226,0.24975634,0.3553542,0.09566722,-1.2151028,-0.28107837,1.2151028,"down","ZC3H12B",340554,"0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","","0003676 // nucleic acid binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:64727183-64727714 (+) // 98.13 // q12"]
["11716948_s_at",-0.12583542,-0.08504963,0.014428139,0.17202187,0.0076885223,-0.0076885223,0.4566701,0.15875053,-1.0888659,-0.122826256,1.0888659,"down","TM9SF3",56889,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005488 // binding // inferred from direct assay","chr10:98277867-98346797 (-) // 96.48 // q24.1"]
["11763989_at",0.06835699,-0.19875336,-0.01718545,0.01718545,-0.13933611,0.24043345,0.8013276,0.5486188,-1.0633537,-0.0886215,1.0633537,"down","LOC100506582",100506582,"","","","chr17:29598768-29600037 (-) // 97.4 // q11.2"]
["11734054_a_at",-0.009624481,-0.007958412,0.007958889,-0.06958628,0.18217134,0.16058493,0.6271168,0.30794403,-1.0675212,-0.09426474,1.0675212,"down","ZMYM6",9204,"0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0007275 // multicellular organismal development // traceable author statement /// 0022604 // regulation of cell morphogenesis // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:35451768-35497715 (-) // 65.22 // p34.3"]
["11756587_a_at",-0.11474705,-0.13329697,-0.26761627,0.36972904,0.11474705,0.11793327,0.15618746,0.018571988,-1.2947646,-0.37268987,1.2947646,"down","PTGDS",5730,"0001516 // prostaglandin biosynthetic process // inferred from direct assay /// 0001516 // prostaglandin biosynthetic process // inferred from sequence or structural similarity /// 0001516 // prostaglandin biosynthetic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from sequence or structural similarity /// 0006810 // transport // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0045187 // regulation of circadian sleep/wake cycle, sleep // inferred from sequence or structural similarity /// 0045187 // regulation of circadian sleep/wake cycle, sleep // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005791 // rough endoplasmic reticulum // inferred from direct assay /// 0005791 // rough endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0004667 // prostaglandin-D synthase activity // inferred from direct assay /// 0004667 // prostaglandin-D synthase activity // inferred from sequence or structural similarity /// 0004667 // prostaglandin-D synthase activity // inferred from electronic annotation /// 0004667 // prostaglandin-D synthase activity // traceable author statement /// 0005215 // transporter activity // inferred from sequence or structural similarity /// 0005215 // transporter activity // inferred from electronic annotation /// 0005501 // retinoid binding // inferred from sequence or structural similarity /// 0005501 // retinoid binding // inferred from electronic annotation /// 0005504 // fatty acid binding // inferred from direct assay /// 0016853 // isomerase activity // inferred from electronic annotation /// 0036094 // small molecule binding // inferred from electronic annotation","chr9:139871956-139876191 (+) // 99.24 // q34.3"]
["11755435_a_at",0.108118534,-0.010854244,0.118878365,-0.10205746,0.010854244,-0.2248931,0.34571487,0.090181924,1.1308542,0.177413,1.1308542,"up","POLI",11201,"0006260 // DNA replication // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation","0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // inferred from electronic annotation /// 0003887 // DNA-directed DNA polymerase activity // inferred from electronic annotation /// 0003887 // DNA-directed DNA polymerase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr18:51795938-51821092 (+) // 98.18 // q21.2"]
["11753082_a_at",0.08981705,0.084346056,-0.09339213,-0.165627,-0.084346056,0.09061408,0.7408643,0.45402485,1.0570498,0.08004328,1.0570498,"up","ZDHHC15",158866,"0016188 // synaptic vesicle maturation // inferred from electronic annotation /// 0018345 // protein palmitoylation // inferred from electronic annotation /// 0045184 // establishment of protein localization // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0016409 // palmitoyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:74670154-74743258 (-) // 70.48 // q13.3"]
["11723743_a_at",-0.2384286,0.066168785,0.033058167,-0.033058167,-0.10510254,0.08102417,0.9326301,0.81692696,-1.0191419,-0.027354956,1.0191419,"down","CADM3",57863,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from sequence or structural similarity /// 0007157 // heterophilic cell-cell adhesion // inferred from sequence or structural similarity /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0042803 // protein homodimerization activity // inferred from sequence or structural similarity","chr1:159141376-159173589 (+) // 97.89 // q23.2"]
["11722598_s_at",-0.36443806,-0.21211624,-0.092142105,0.206254,0.19766712,0.09214163,0.12153661,0.011099335,-1.3088076,-0.38825303,1.3088076,"down","CXCR7",57007,"0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0070098 // chemokine-mediated signaling pathway // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0016494 // C-X-C chemokine receptor activity // inferred from mutant phenotype","chr2:237476447-237491001 (+) // 93.98 // q37.3"]
["11734018_at",0.048768044,-0.14075994,-0.103158,0.14146328,0.112555504,-0.048768044,0.48879698,0.18235683,-1.0969266,-0.13346694,1.0969266,"down","URB1",9875,"","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // non-traceable author statement /// 0005730 // nucleolus // inferred from electronic annotation","","chr21:33683329-33765312 (-) // 94.01 // q22.11"]
["11756885_a_at",0.008244514,-0.12113953,-0.008244514,0.09105396,0.1092844,-0.07932091,0.6451282,0.32811537,-1.057545,-0.08071898,1.057545,"down","ATAD2",29028,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr8:124332741-124428590 (-) // 97.31 // q24.13"]
["11722023_a_at",0.017938614,-0.043931007,-0.017938614,0.026109695,-0.057593346,0.04954052,0.8339043,0.607592,-1.0144253,-0.0206626,1.0144253,"down","ABCF2",10061,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005740 // mitochondrial envelope // traceable author statement /// 0043190 // ATP-binding cassette (ABC) transporter complex // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0005215 // transporter activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // traceable author statement /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr7:150909140-150924666 (-) // 81.12 // q36.1"]
["11758030_s_at",0.024174213,0.33483386,0.047622204,-0.024174213,-0.09003329,-0.264776,0.3646539,0.100312114,1.1990329,0.26187125,1.1990329,"up","FOXG1",2290,"0002052 // positive regulation of neuroblast proliferation // not recorded /// 0002052 // positive regulation of neuroblast proliferation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007346 // regulation of mitotic cell cycle // not recorded /// 0007346 // regulation of mitotic cell cycle // inferred from electronic annotation /// 0007420 // brain development // traceable author statement /// 0009792 // embryo development ending in birth or egg hatching // not recorded /// 0009888 // tissue development // not recorded /// 0009953 // dorsal/ventral pattern formation // not recorded /// 0009953 // dorsal/ventral pattern formation // inferred from electronic annotation /// 0016199 // axon midline choice point recognition // not recorded /// 0016199 // axon midline choice point recognition // inferred from electronic annotation /// 0021954 // central nervous system neuron development // not recorded /// 0021954 // central nervous system neuron development // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0030902 // hindbrain development // not recorded /// 0035058 // nonmotile primary cilium assembly // not recorded /// 0042472 // inner ear morphogenesis // not recorded /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0043584 // nose development // not recorded /// 0045665 // negative regulation of neuron differentiation // not recorded /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045787 // positive regulation of cell cycle // not recorded /// 0045787 // positive regulation of cell cycle // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // not recorded /// 0048667 // cell morphogenesis involved in neuron differentiation // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // not recorded","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // not recorded","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // not recorded /// 0008301 // DNA binding, bending // not recorded /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr14:29238380-29238872 (+) // 100.0 // q12"]
["11729093_a_at",-0.0574131,0.0077810287,0.033337116,-0.0077810287,0.09882021,-0.011715412,0.7837732,0.5194054,-1.0223385,-0.03187297,1.0223385,"down","IGF2-AS",51214,"","","","chr11:2161736-2169894 (+) // 97.92 // p15.5"]
["11720182_at",-0.008729935,-0.16457558,-0.051441193,0.008729935,0.024364471,0.07927513,0.35097343,0.09310264,-1.0810041,-0.11237205,1.0810041,"down","SMG8",55181,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from mutant phenotype /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0045859 // regulation of protein kinase activity // inferred from mutant phenotype","0005829 // cytosol // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr17:57286763-57292611 (+) // 95.46 // q22"]
["11763237_x_at",-0.040529728,0.17167711,-0.027683258,0.061841965,0.012309551,-0.012309551,0.9486034,0.85672736,1.0096631,0.013873988,1.0096631,"up","IGLC1",3537,"0006955 // immune response // non-traceable author statement /// 0006956 // complement activation // traceable author statement /// 0006958 // complement activation, classical pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0050776 // regulation of immune response // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005886 // plasma membrane // traceable author statement","0003823 // antigen binding // non-traceable author statement /// 0003823 // antigen binding // inferred from electronic annotation","chr22:22758538-23248589 (+) // 86.37 // q11.22"]
["11759866_at",0.06996441,-0.14534473,0.0154976845,-0.051261425,-0.0154976845,0.08304024,0.9074209,0.7554038,-1.0177534,-0.025387987,1.0177534,"down","","","","","","chr3:107673315-107751108 (-) // 57.35 // q13.12"]
["11740257_a_at",-0.30040073,-0.31270885,-0.012947559,0.17455435,0.012947559,0.019911766,0.29751557,0.06693573,-1.2123646,-0.27782357,1.2123646,"down","CXorf23",256643,"","0005739 // mitochondrion // inferred from electronic annotation","","chrX:19931692-19984769 (-) // 74.51 // p22.12"]
["11753532_a_at",-0.022834778,0.022834778,0.063224316,-0.047982216,0.039204597,-0.06322384,0.6444479,0.32754704,1.031737,0.04507522,1.031737,"up","KCNIP3",30818,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007610 // behavior // inferred from electronic annotation /// 0019233 // sensory perception of pain // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0043523 // regulation of neuron apoptotic process // inferred from electronic annotation /// 0048265 // response to pain // inferred from electronic annotation /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005267 // potassium channel activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0048306 // calcium-dependent protein binding // inferred from electronic annotation","chr2:95976100-96049797 (+) // 97.87 // q11.1"]
["11730584_a_at",-0.36697006,-0.23267317,0.11794233,-0.11794233,0.30999184,0.32897663,0.48447996,0.17899129,-1.2607151,-0.3342423,1.2607151,"down","ABCG4",64137,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0033344 // cholesterol efflux // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0017127 // cholesterol transporter activity // traceable author statement /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction","chr11:119019721-119033367 (+) // 96.9 // q23.3"]
["11746151_x_at",-0.34332228,-0.056141853,-0.091300964,0.09679794,0.056141853,0.10069609,0.26577494,0.053522922,-1.1876696,-0.24813358,1.1876696,"down","BMS1P4",729096,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr10:75461120-75490263 (-) // 77.69 // q22.2"]
["11743322_at",0.18121052,0.017039299,-0.017039299,0.08040619,-0.121738434,-0.106949806,0.6059395,0.2862074,1.0791017,0.10983081,1.0791017,"up","C20orf111",51526,"","","","chr20:42824582-42839579 (-) // 79.96 // q13.12"]
["11717958_s_at",0.27151775,-0.044234276,0.044234276,0.1227541,-0.18984032,-0.07116604,0.66799355,0.355754,1.0993037,0.13659003,1.0993037,"up","PATL1",219988,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000290 // deadenylation-dependent decapping of nuclear-transcribed mRNA // inferred from direct assay /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0033962 // cytoplasmic mRNA processing body assembly // inferred from direct assay /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement","0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0030014 // CCR4-NOT complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008266 // poly(U) RNA binding // inferred from direct assay /// 0034046 // poly(G) RNA binding // inferred from direct assay","chr11:59404188-59436640 (-) // 94.03 // q12.1"]
["AFFX-BkGr-GC14_at",-0.017567873,0.038481236,0.014199734,-0.014199734,-0.048375607,0.028321505,0.7368941,0.44756675,1.0161563,0.02312235,1.0161563,"up",-0.014199734,-0.048375607,0.028321505,-0.017567873,0.038481236,0.014199734]
["11762922_s_at",-0.03412342,-0.044172287,-0.026492119,0.05125332,0.041967392,0.026492119,0.041962415,0.0010729533,-1.0532395,-0.07483348,1.0532395,"down","COX3 /// MYBPC3 /// SLC12A1","4514 /// 4607 /// 6557","0001657 // ureteric bud development // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0002027 // regulation of heart rate // inferred from electronic annotation /// 0002043 // blood vessel endothelial cell proliferation involved in sprouting angiogenesis // inferred from direct assay /// 0003007 // heart morphogenesis // inferred from mutant phenotype /// 0003007 // heart morphogenesis // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from electronic annotation /// 0006936 // muscle contraction // inferred from electronic annotation /// 0006942 // regulation of striated muscle contraction // inferred from sequence or structural similarity /// 0006942 // regulation of striated muscle contraction // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007588 // excretion // inferred from electronic annotation /// 0008016 // regulation of heart contraction // inferred from electronic annotation /// 0010594 // regulation of endothelial cell migration // inferred from direct assay /// 0030049 // muscle filament sliding // traceable author statement /// 0030514 // negative regulation of BMP signaling pathway // inferred from electronic annotation /// 0030514 // negative regulation of BMP signaling pathway // traceable author statement /// 0031034 // myosin filament assembly // inferred from electronic annotation /// 0032781 // positive regulation of ATPase activity // inferred from sequence or structural similarity /// 0032971 // regulation of muscle filament sliding // inferred from sequence or structural similarity /// 0034220 // ion transmembrane transport // inferred from sequence or structural similarity /// 0034220 // ion transmembrane transport // inferred from electronic annotation /// 0042118 // endothelial cell activation // inferred from direct assay /// 0045214 // sarcomere organization // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0048878 // chemical homeostasis // inferred from electronic annotation /// 0055010 // ventricular cardiac muscle tissue morphogenesis // inferred from mutant phenotype /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0060048 // cardiac muscle contraction // inferred from sequence or structural similarity /// 0060048 // cardiac muscle contraction // inferred from electronic annotation /// 0060393 // regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005624 // membrane fraction // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005863 // striated muscle myosin thick filament // inferred from direct assay /// 0005863 // striated muscle myosin thick filament // inferred from sequence or structural similarity /// 0005863 // striated muscle myosin thick filament // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014705 // C zone // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030016 // myofibril // inferred from electronic annotation /// 0030017 // sarcomere // inferred from direct assay /// 0030017 // sarcomere // inferred from electronic annotation /// 0031672 // A band // inferred from direct assay /// 0031672 // A band // inferred from electronic annotation /// 0032982 // myosin filament // inferred from electronic annotation","0001671 // ATPase activator activity // inferred from sequence or structural similarity /// 0003779 // actin binding // inferred from electronic annotation /// 0005215 // transporter activity // inferred from electronic annotation /// 0008307 // structural constituent of muscle // inferred from mutant phenotype /// 0008511 // sodium:potassium:chloride symporter activity // inferred from electronic annotation /// 0008511 // sodium:potassium:chloride symporter activity // traceable author statement /// 0015075 // ion transmembrane transporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation /// 0015377 // cation:chloride symporter activity // inferred from electronic annotation /// 0017022 // myosin binding // inferred from direct assay /// 0031432 // titin binding // non-traceable author statement /// 0032036 // myosin heavy chain binding // inferred from physical interaction /// 0032036 // myosin heavy chain binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrM:9034-9988 (+) // 92.91 //"]
["11738996_a_at",0.029294968,-0.004213333,0.004213333,0.18804169,-0.10821724,-0.26050854,0.8432886,0.6241957,1.0497116,0.06999299,1.0497116,"up","DPYSL2",1808,"0001975 // response to amphetamine // inferred from electronic annotation /// 0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0006208 // pyrimidine base catabolic process // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from sequence or structural similarity /// 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007420 // brain development // inferred from electronic annotation /// 0014049 // positive regulation of glutamate secretion // inferred from electronic annotation /// 0021510 // spinal cord development // inferred from electronic annotation /// 0021772 // olfactory bulb development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042220 // response to cocaine // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0045664 // regulation of neuron differentiation // inferred from electronic annotation /// 0048489 // synaptic vesicle transport // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043195 // terminal button // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0004157 // dihydropyrimidinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016810 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds // inferred from electronic annotation /// 0016812 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation","chr8:26435420-26515691 (+) // 88.56 // p21.2"]
["11723222_s_at",-0.1404593,0.15046549,0.15624404,-0.20148349,-0.010988474,0.010988474,0.67210627,0.36095116,1.0886785,0.12257794,1.0886785,"up","MYOT",9499,"0006936 // muscle contraction // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030018 // Z disc // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008307 // structural constituent of muscle // traceable author statement","chr5:137203479-137223540 (+) // 96.92 // q31.2"]
["11744630_a_at",0.3784232,0.24111843,0.21495628,-0.27580833,-0.21495628,-0.36231995,0.041810293,0.0010589063,1.4768543,0.56252754,1.4768543,"up","NXPE3",91775,"","0005576 // extracellular region // inferred from electronic annotation","","chr3:101500549-101541667 (+) // 96.28 // q12.3"]
["11741130_a_at",0.05149126,-0.027592659,0.027592659,-0.24688864,-0.07676458,0.027965069,0.55660045,0.23775105,1.0835205,0.11572649,1.0835205,"up","NLGN4X",57502,"0003360 // brainstem development // inferred from sequence or structural similarity /// 0007155 // cell adhesion // inferred from electronic annotation /// 0021549 // cerebellum development // inferred from sequence or structural similarity /// 0035176 // social behavior // inferred from mutant phenotype /// 0045216 // cell-cell junction organization // non-traceable author statement /// 0046622 // positive regulation of organ growth // inferred from sequence or structural similarity /// 0050808 // synapse organization // inferred from mutant phenotype /// 0050808 // synapse organization // non-traceable author statement /// 0071625 // vocalization behavior // inferred from mutant phenotype /// 0071625 // vocalization behavior // inferred from sequence or structural similarity /// 0090394 // negative regulation of excitatory postsynaptic membrane potential // inferred from direct assay /// 0097105 // presynaptic membrane assembly // inferred from direct assay","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030425 // dendrite // inferred from direct assay /// 0045202 // synapse // not recorded /// 0045202 // synapse // inferred from sequence or structural similarity /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0060076 // excitatory synapse // inferred from direct assay","0004091 // carboxylesterase activity // not recorded /// 0004872 // receptor activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0031404 // chloride ion binding // inferred from direct assay /// 0042043 // neurexin family protein binding // inferred from direct assay /// 0042043 // neurexin family protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay","chrX:5808084-6147086 (-) // 97.39 // p22.32"]
["11729155_at",-0.04390526,-0.03772044,0.03772068,-0.07242489,0.13181591,0.33782125,0.6120486,0.2921403,-1.1072946,-0.14703906,1.1072946,"down","CEACAM6",4680,"0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr19:42254884-42275774 (+) // 51.02 // q13.2"]
["11716214_a_at",-0.15274906,-0.4078474,-0.53682613,0.36056042,0.21488094,0.15274906,0.110967204,0.009080462,-1.5247129,-0.6085376,1.5247129,"down","PRPF3",9129,"0000375 // RNA splicing, via transesterification reactions // traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // non-traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005681 // spliceosomal complex // non-traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0015030 // Cajal body // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:150293916-150325671 (+) // 95.42 // q21.2"]
["11762866_at",-0.104491234,0.13082409,0.39574575,-0.0063328743,0.0063328743,-0.011823177,0.6823784,0.37377125,1.1054502,0.14463396,1.1054502,"up","LINC00476",100128782,"","","","chr9:98521510-98637762 (-) // 68.4 // q22.32"]
["11762388_at",-0.20860815,0.1280179,0.13977575,-0.24725342,-0.118098736,0.118098736,0.8019638,0.5495307,1.0733691,0.10214632,1.0733691,"up","ZNF280D",54816,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:56944687-56999506 (-) // 95.47 // q21.3"]
["11747835_a_at",-0.008467674,-0.0715332,-0.03724289,0.24528503,0.122639656,0.008467674,0.32612574,0.080674775,-1.1208129,-0.16454546,1.1208129,"down","FUBP1",8880,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation","chr1:78414838-78444794 (-) // 93.78 // p31.1"]
["11759758_at",-0.050004005,0.122131824,0.18429947,-0.1043067,-0.014434814,0.014435291,0.5132846,0.2011261,1.0869191,0.12024452,1.0869191,"up","LOC339803",339803,"","","","chr2:61368324-61372110 (-) // 35.7 // p15"]
["11721750_at",-0.1255598,0.0946641,-0.06272745,0.059000492,-0.059000015,0.21790886,0.6818244,0.37275675,-1.0746331,-0.10384421,1.0746331,"down","FZD7",8324,"0001944 // vasculature development // not recorded /// 0006355 // regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007199 // G-protein coupled receptor signaling pathway coupled to cGMP nucleotide second messenger // not recorded /// 0007223 // Wnt receptor signaling pathway, calcium modulating pathway // not recorded /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007409 // axonogenesis // not recorded /// 0007420 // brain development // not recorded /// 0008406 // gonad development // not recorded /// 0010812 // negative regulation of cell-substrate adhesion // inferred from mutant phenotype /// 0014834 // satellite cell maintenance involved in skeletal muscle regeneration // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0019827 // stem cell maintenance // inferred from mutant phenotype /// 0030182 // neuron differentiation // inferred from sequence or structural similarity /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0034446 // substrate adhesion-dependent cell spreading // inferred from electronic annotation /// 0035412 // regulation of catenin import into nucleus // inferred from mutant phenotype /// 0035567 // non-canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0038031 // non-canonical Wnt receptor signaling pathway via JNK cascade // inferred from mutant phenotype /// 0042327 // positive regulation of phosphorylation // inferred from direct assay /// 0042666 // negative regulation of ectodermal cell fate specification // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0046330 // positive regulation of JNK cascade // inferred by curator /// 0048103 // somatic stem cell division // inferred from electronic annotation /// 0060054 // positive regulation of epithelial cell proliferation involved in wound healing // inferred from mutant phenotype /// 0060070 // canonical Wnt receptor signaling pathway // inferred from direct assay /// 0060070 // canonical Wnt receptor signaling pathway // inferred from mutant phenotype /// 0060070 // canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0060231 // mesenchymal to epithelial transition // inferred from mutant phenotype /// 0071300 // cellular response to retinoic acid // inferred from sequence or structural similarity","0005737 // cytoplasm // not recorded /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032589 // neuron projection membrane // not recorded /// 0045177 // apical part of cell // not recorded","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0017147 // Wnt-protein binding // inferred from physical interaction /// 0017147 // Wnt-protein binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from physical interaction /// 0042813 // Wnt-activated receptor activity // not recorded /// 0042813 // Wnt-activated receptor activity // inferred from electronic annotation","chr2:202899309-202903164 (+) // 99.43 // q33.1"]
["11752598_x_at",-0.3439393,0.37165403,0.120651245,-0.3359375,0.0014615059,-0.0014615059,0.7927709,0.53423494,1.1183987,0.16143455,1.1183987,"up","ZDHHC20",253832,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr13:21950514-22033509 (-) // 90.3 // q12.11"]
["11716149_a_at",0.060997963,-0.13885832,-0.24978781,0.09549141,0.013372898,-0.013372898,0.5338168,0.2182406,-1.1027048,-0.14104657,1.1027048,"down","PMEPA1",56937,"0030521 // androgen receptor signaling pathway // non-traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0050699 // WW domain binding // inferred from physical interaction","chr20:56223451-56285063 (-) // 92.46 // q13.31"]
["11718966_at",-0.051799774,-0.008214951,-0.0708828,0.19548321,0.18674755,0.008214951,0.26362267,0.052719194,-1.128011,-0.17378111,1.128011,"down","NUFIP2",57532,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0042788 // polysomal ribosome // inferred from direct assay","0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr17:27582857-27621166 (-) // 94.03 // q11.2"]
["11763434_a_at",-0.013389111,0.012529373,-0.012529373,0.15835476,-0.067174435,0.116633415,0.66454667,0.35036185,-1.0524373,-0.07373429,1.0524373,"down","CAPN10",11132,"0006508 // proteolysis // inferred from mutant phenotype /// 0006508 // proteolysis // inferred from electronic annotation /// 0031532 // actin cytoskeleton reorganization // inferred from sequence or structural similarity /// 0031532 // actin cytoskeleton reorganization // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from mutant phenotype /// 0032388 // positive regulation of intracellular transport // inferred from sequence or structural similarity /// 0032388 // positive regulation of intracellular transport // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from mutant phenotype /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0046326 // positive regulation of glucose import // inferred from mutant phenotype /// 0046326 // positive regulation of glucose import // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005623 // cell // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from sequence or structural similarity","0000149 // SNARE binding // inferred from sequence or structural similarity /// 0004198 // calcium-dependent cysteine-type endopeptidase activity // inferred from mutant phenotype /// 0004198 // calcium-dependent cysteine-type endopeptidase activity // inferred from electronic annotation /// 0008092 // cytoskeletal protein binding // inferred from sequence or structural similarity /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr2:241530386-241538520 (+) // 99.61 // q37.3"]
["11718498_s_at",0.0733881,-0.0077810287,-0.03128338,0.020059586,-0.07069969,0.0077810287,0.818255,0.5783456,1.017993,0.025727604,1.017993,"up","F8A1 /// F8A2 /// F8A3","474383 /// 474384 /// 8263","","0005634 // nucleus // inferred from direct assay","","chrX:154114508-154116336 (+) // 91.26 // q28 /// chrX:154611625-154613450 (+) // 91.1 // q28 /// chrX:154686574-154688399 (-) // 91.1 // q28"]
["11758783_at",-0.2955494,0.13090181,0.09778023,-0.049619675,-0.15942574,0.049619675,0.94489664,0.84675914,1.0216159,0.03085283,1.0216159,"up","COX6C",1345,"0006091 // generation of precursor metabolites and energy // traceable author statement /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004129 // cytochrome-c oxidase activity // inferred from electronic annotation","chr8:100890093-100906290 (-) // 78.81 // q22.2"]
["11728725_x_at",0.03233528,0.09155083,-0.03233528,0.18275738,-0.14601898,-0.053117752,0.9038464,0.74726224,1.0252507,0.03597669,1.0252507,"up","TAF6",6878,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006352 // transcription initiation, DNA-dependent // inferred from direct assay /// 0006352 // transcription initiation, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // non-traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006413 // translational initiation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0045786 // negative regulation of cell cycle // inferred from direct assay /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005669 // transcription factor TFIID complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0033276 // transcription factor TFTC complex // inferred from direct assay /// 0071339 // MLL1 complex // inferred from direct assay","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr7:99704699-99716988 (-) // 97.93 // q22.1"]
["11716853_x_at",-0.18248272,0.096533775,0.1921587,-0.23982143,-0.06438732,0.06438732,0.7475597,0.46465388,1.0832331,0.11534375,1.0832331,"up","IMPAD1",54928,"0001501 // skeletal system development // inferred from electronic annotation /// 0001958 // endochondral ossification // inferred from electronic annotation /// 0002063 // chondrocyte development // inferred from electronic annotation /// 0006021 // inositol biosynthetic process // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0030204 // chondroitin sulfate metabolic process // inferred from electronic annotation /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation","0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008254 // 3'-nucleotidase activity // inferred from electronic annotation /// 0008441 // 3'(2'),5'-bisphosphate nucleotidase activity // inferred from electronic annotation /// 0008934 // inositol monophosphate 1-phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0052832 // inositol monophosphate 3-phosphatase activity // inferred from electronic annotation /// 0052833 // inositol monophosphate 4-phosphatase activity // inferred from electronic annotation /// 0052834 // inositol monophosphate phosphatase activity // inferred from electronic annotation","chr8:57870491-57906446 (-) // 91.71 // q12.1"]
["11740794_at",-0.018026352,-0.22784519,-0.27786493,0.1636138,0.16334295,0.018026352,0.21716146,0.035976768,-1.2222786,-0.28957316,1.2222786,"down","C1orf220",400798,"","","","chr1:178511930-178518024 (+) // 51.07 // q25.2"]
["11748639_a_at",0.22576427,0.051209927,-0.1162467,0.5890446,-0.3316641,-0.051209927,0.98664814,0.9608209,-1.0105549,-0.015147714,1.0105549,"down","LOC389458 /// RBAK /// RBAK-LOC389458","100533952 /// 389458 /// 57786","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:5085451-5106758 (+) // 88.04 // p22.1"]
["11730705_s_at",-0.21898317,-0.049545765,0.049545765,-0.31796932,0.15584135,0.10910225,0.90980893,0.76107496,-1.039089,-0.05531918,1.039089,"down","OR51E2",81285,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // non-traceable author statement /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // non-traceable author statement /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // non-traceable author statement /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:4701400-4719076 (-) // 74.32 // p15.4"]
["11756718_a_at",0.03454542,-0.020047665,-0.012503147,0.10104418,0.012503147,-0.07984018,0.9486034,0.8568042,-1.007354,-0.010570788,1.007354,"down","PRR5",55615,"0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0030036 // actin cytoskeleton organization // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0032321 // positive regulation of Rho GTPase activity // inferred from direct assay /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from direct assay /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // inferred from direct assay /// 0005100 // Rho GTPase activator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr22:45072948-45133545 (+) // 98.55 // q13.31"]
["11734684_s_at",-0.012151718,-0.04035759,-0.019647598,0.012151718,0.026988983,0.02750206,0.11181555,0.009238228,-1.0325893,-0.046266574,1.0325893,"down","UMPS",7372,"0006206 // pyrimidine base metabolic process // traceable author statement /// 0006207 // 'de novo' pyrimidine base biosynthetic process // inferred from electronic annotation /// 0006221 // pyrimidine nucleotide biosynthetic process // inferred from electronic annotation /// 0006222 // UMP biosynthetic process // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0009116 // nucleoside metabolic process // inferred from electronic annotation /// 0044205 // 'de novo' UMP biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046134 // pyrimidine nucleoside biosynthetic process // traceable author statement /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004588 // orotate phosphoribosyltransferase activity // inferred from direct assay /// 0004588 // orotate phosphoribosyltransferase activity // traceable author statement /// 0004588 // orotate phosphoribosyltransferase activity // inferred from electronic annotation /// 0004590 // orotidine-5'-phosphate decarboxylase activity // inferred from direct assay /// 0004590 // orotidine-5'-phosphate decarboxylase activity // traceable author statement /// 0004590 // orotidine-5'-phosphate decarboxylase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation","chr3:124449212-124464040 (+) // 73.19 // q21.2"]
["11730735_s_at",-0.19125366,-0.092461586,-0.010280609,0.17403889,0.13095665,0.010280609,0.24895732,0.047198784,-1.1511618,-0.20309061,1.1511618,"down","PPP1R8",5511,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006401 // RNA catabolic process // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0004864 // protein phosphatase inhibitor activity // inferred from electronic annotation /// 0004865 // protein serine/threonine phosphatase inhibitor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008599 // protein phosphatase type 1 regulator activity // inferred from electronic annotation /// 0008995 // ribonuclease E activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation","chr1:28157251-28178191 (+) // 99.79 // p35.3"]
["11741197_s_at",-0.060726404,-0.07089043,0.060726404,-0.11823678,0.15706706,0.1270287,0.7452139,0.4611324,-1.0562245,-0.07891646,1.0562245,"down","KIF5C",3800,"0006996 // organelle organization // traceable author statement /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005871 // kinesin complex // traceable author statement /// 0005874 // microtubule // inferred from electronic annotation /// 0035253 // ciliary rootlet // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003777 // microtubule motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0034190 // apolipoprotein receptor binding // inferred from electronic annotation","chr2:149632791-149883273 (+) // 98.14 // q23.1"]
["11728710_a_at",0.25419617,-0.036592484,0.00020742416,0.18000078,-0.032652855,-0.000207901,0.94428957,0.8448254,1.0164626,0.023557082,1.0164626,"up","NFATC2IP",84901,"0001816 // cytokine production // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","","chr16:28962257-28977873 (+) // 55.54 // p11.2"]
["11738028_a_at",0.10259342,0.06995344,0.12910652,-0.069952965,-0.20245314,-0.31165028,0.1403624,0.014807742,1.2270862,0.2952366,1.2270862,"up","LAMA1",284217,"0002011 // morphogenesis of an epithelial sheet // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from sequence or structural similarity /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0009888 // tissue development // inferred from electronic annotation /// 0030155 // regulation of cell adhesion // inferred from electronic annotation /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0045198 // establishment of epithelial cell apical/basal polarity // inferred from electronic annotation /// 0045995 // regulation of embryonic development // inferred from electronic annotation /// 0060041 // retina development in camera-type eye // inferred from electronic annotation /// 0060441 // epithelial tube branching involved in lung morphogenesis // inferred from electronic annotation /// 0060445 // branching involved in salivary gland morphogenesis // inferred from electronic annotation /// 0061304 // retinal blood vessel morphogenesis // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from sequence or structural similarity /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from direct assay /// 0005604 // basement membrane // inferred from electronic annotation /// 0005606 // laminin-1 complex // inferred from direct assay /// 0005606 // laminin-1 complex // inferred from physical interaction /// 0005606 // laminin-1 complex // inferred from electronic annotation /// 0005608 // laminin-3 complex // inferred from physical interaction /// 0005615 // extracellular space // inferred from direct assay /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0031012 // extracellular matrix // traceable author statement /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0043256 // laminin complex // inferred from electronic annotation","0005102 // receptor binding // inferred from electronic annotation /// 0005201 // extracellular matrix structural constituent // inferred from sequence or structural similarity /// 0005201 // extracellular matrix structural constituent // inferred from electronic annotation /// 0043208 // glycosphingolipid binding // inferred from electronic annotation","chr18:6941887-7117813 (-) // 99.8 // p11.31"]
["11750246_a_at",0.24078894,0.13426018,0.14164686,-0.13426018,-0.17447615,-0.25533152,0.05383652,0.0018891168,1.2836524,0.36025462,1.2836524,"up","GPER",2852,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0030518 // intracellular steroid hormone receptor signaling pathway // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0045742 // positive regulation of epidermal growth factor receptor signaling pathway // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0005496 // steroid binding // inferred from electronic annotation /// 0042562 // hormone binding // inferred from electronic annotation","chr7:1132500-1133446 (+) // 100.0 // p22.3"]
["11718206_x_at",0.015013695,-0.050852776,-0.1077795,0.06714821,0.077391624,-0.015013695,0.39646384,0.11876631,-1.0651438,-0.09104825,1.0651438,"down","TOE1",114034,"","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:45805319-45809763 (+) // 92.93 // p34.1"]
["11754615_x_at",-0.20554352,-0.1860447,-0.0481205,0.09838295,0.17665958,0.0481205,0.1407137,0.014896158,-1.1927491,-0.25429064,1.1927491,"down","UFM1",51569,"0071569 // protein ufmylation // inferred from direct assay /// 0071569 // protein ufmylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","","chr13:38935219-38937140 (+) // 90.93 // q13.3"]
["11727527_x_at",0.20548058,0.2413063,0.14018059,-0.29479408,-0.14018059,-0.36209154,0.06724116,0.003056107,1.3768244,0.46134454,1.3768244,"up","TNNT2",7139,"0006200 // ATP catabolic process // inferred from direct assay /// 0008016 // regulation of heart contraction // inferred from mutant phenotype /// 0030049 // muscle filament sliding // inferred from direct assay /// 0030049 // muscle filament sliding // traceable author statement /// 0032780 // negative regulation of ATPase activity // inferred from direct assay /// 0032781 // positive regulation of ATPase activity // inferred from direct assay /// 0051592 // response to calcium ion // inferred from direct assay /// 0051592 // response to calcium ion // inferred from mutant phenotype /// 0055010 // ventricular cardiac muscle tissue morphogenesis // inferred from mutant phenotype","0005829 // cytosol // traceable author statement /// 0005861 // troponin complex // inferred from direct assay /// 0005865 // striated muscle thin filament // inferred from direct assay /// 0030017 // sarcomere // traceable author statement","0003779 // actin binding // inferred from direct assay /// 0005523 // tropomyosin binding // inferred from direct assay /// 0016887 // ATPase activity // inferred from direct assay /// 0030172 // troponin C binding // inferred from physical interaction /// 0031013 // troponin I binding // inferred from physical interaction","chr1:201328136-201346890 (-) // 88.23 // q32.1"]
["11763058_at",-0.044011593,0.25702286,-0.16506553,-0.055672884,0.044011354,0.18369055,0.9201148,0.78735447,-1.0290842,-0.041361038,1.0290842,"down","TAC3",6866,"0007217 // tachykinin receptor signaling pathway // inferred from electronic annotation /// 0007217 // tachykinin receptor signaling pathway // traceable author statement /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007565 // female pregnancy // traceable author statement /// 0043278 // response to morphine // inferred from electronic annotation /// 0045777 // positive regulation of blood pressure // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005625 // soluble fraction // traceable author statement","0005102 // receptor binding // traceable author statement","chr12:57407140-57410297 (-) // 66.31 // q13.3"]
["11732528_s_at",-0.038414717,0.038414717,-0.057670355,-0.20539212,0.1384728,0.08383489,0.939816,0.8332334,-1.0173824,-0.024862017,1.0173824,"down","TBX5",6910,"0002009 // morphogenesis of an epithelium // inferred from electronic annotation /// 0003166 // bundle of His development // inferred from electronic annotation /// 0003181 // atrioventricular valve morphogenesis // inferred from electronic annotation /// 0003197 // endocardial cushion development // inferred from electronic annotation /// 0003218 // cardiac left ventricle formation // inferred from sequence or structural similarity /// 0003218 // cardiac left ventricle formation // inferred from electronic annotation /// 0003229 // ventricular cardiac muscle tissue development // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from sequence or structural similarity /// 0003281 // ventricular septum development // inferred from electronic annotation /// 0003283 // atrial septum development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006917 // induction of apoptosis // inferred from direct assay /// 0007267 // cell-cell signaling // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0007507 // heart development // inferred from direct assay /// 0007507 // heart development // inferred from mutant phenotype /// 0007507 // heart development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0010467 // gene expression // traceable author statement /// 0010719 // negative regulation of epithelial to mesenchymal transition // traceable author statement /// 0030324 // lung development // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from mutant phenotype /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from direct assay /// 0035115 // embryonic forelimb morphogenesis // inferred from electronic annotation /// 0035117 // embryonic arm morphogenesis // inferred from mutant phenotype /// 0035136 // forelimb morphogenesis // inferred from mutant phenotype /// 0035136 // forelimb morphogenesis // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051891 // positive regulation of cardioblast differentiation // inferred from direct assay /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0060039 // pericardium development // inferred from direct assay /// 0060044 // negative regulation of cardiac muscle cell proliferation // inferred from direct assay /// 0060045 // positive regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0060980 // cell migration involved in coronary vasculogenesis // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement","0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay","chr12:114791731-114843968 (-) // 93.28 // q24.21"]
["11739910_a_at",-0.0009250641,0.113366604,0.10872269,-0.09586549,-0.1681037,0.0009250641,0.27830926,0.05874385,1.1183741,0.16140287,1.1183741,"up","ELOVL6",79071,"0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0019367 // fatty acid elongation, saturated fatty acid // inferred from direct assay /// 0019367 // fatty acid elongation, saturated fatty acid // inferred from electronic annotation /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0030497 // fatty acid elongation // inferred from electronic annotation /// 0034625 // fatty acid elongation, monounsaturated fatty acid // inferred from electronic annotation /// 0035338 // long-chain fatty-acyl-CoA biosynthetic process // traceable author statement /// 0042759 // long-chain fatty acid biosynthetic process // inferred from direct assay /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0009922 // fatty acid elongase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation","chr4:110970228-111120139 (-) // 99.32 // q25"]
["11728816_at",0.016646862,-0.057068348,-0.09707546,0.08451557,0.046407223,-0.016646862,0.41890362,0.13230781,-1.0598972,-0.08392432,1.0598972,"down","AARS2",57505,"0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006419 // alanyl-tRNA aminoacylation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0033108 // mitochondrial respiratory chain complex assembly // inferred from mutant phenotype /// 0043039 // tRNA aminoacylation // inferred from electronic annotation /// 0070143 // mitochondrial alanyl-tRNA aminoacylation // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from mutant phenotype /// 0005739 // mitochondrion // inferred from electronic annotation","0000049 // tRNA binding // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004813 // alanine-tRNA ligase activity // inferred from mutant phenotype /// 0004813 // alanine-tRNA ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016876 // ligase activity, forming aminoacyl-tRNA and related compounds // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:44265608-44281063 (-) // 79.85 // p21.1"]
["11760628_at",0,0.21489334,-0.05278635,0.012835026,0,-0.012834549,0.80022997,0.5468222,1.0381649,0.05403555,1.0381649,"up","TTLL5",23093,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006464 // cellular protein modification process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0004835 // tubulin-tyrosine ligase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation","chr14:76127620-76178845 (+) // 94.43 // q24.3"]
["11726979_x_at",0.09642649,-0.24466181,0.013875008,0.35371256,-0.013875008,-0.11340809,0.7904509,0.53041416,-1.0869331,-0.12026319,1.0869331,"down","SUGP2",10147,"0006396 // RNA processing // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr19:19103001-19144380 (-) // 88.95 // p13.11"]
["11717107_a_at",-0.048869133,-0.025509834,0.025509834,-0.056271553,0.15712929,0.028336525,0.7154243,0.41813108,-1.0419995,-0.05935453,1.0419995,"down","PDLIM5",10611,"0051963 // regulation of synapse assembly // inferred from sequence or structural similarity /// 0051963 // regulation of synapse assembly // inferred from electronic annotation /// 0061001 // regulation of dendritic spine morphogenesis // inferred from sequence or structural similarity /// 0061001 // regulation of dendritic spine morphogenesis // inferred from electronic annotation","0005624 // membrane fraction // inferred from sequence or structural similarity /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from sequence or structural similarity /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030018 // Z disc // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0003779 // actin binding // inferred from sequence or structural similarity /// 0003779 // actin binding // inferred from electronic annotation /// 0005080 // protein kinase C binding // inferred from sequence or structural similarity /// 0005080 // protein kinase C binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0042805 // actinin binding // inferred from sequence or structural similarity /// 0042805 // actinin binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from electronic annotation","chr4:95373041-95589377 (+) // 81.23 // q22.3"]
["11727423_a_at",0.015096664,-0.010828018,0.030227661,-0.058006287,-0.05216217,0.010828018,0.44538602,0.14995684,1.0314059,0.04461224,1.0314059,"up","CANX",821,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0006457 // protein folding // traceable author statement /// 0006457 // protein folding // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0009306 // protein secretion // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0048488 // synaptic vesicle endocytosis // inferred from sequence or structural similarity /// 0072583 // clathrin-mediated endocytosis // inferred from sequence or structural similarity","0005622 // intracellular // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // non-traceable author statement /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005791 // rough endoplasmic reticulum // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0032839 // dendrite cytoplasm // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0071556 // integral to lumenal side of endoplasmic reticulum membrane // traceable author statement","0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0005509 // calcium ion binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0034185 // apolipoprotein binding // inferred from electronic annotation /// 0035255 // ionotropic glutamate receptor binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // non-traceable author statement /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr5:179125927-179158637 (+) // 91.82 // q35.3"]
["11747592_x_at",0.24459553,0.13465977,0.042729378,-0.042729378,-0.1723566,-0.08653259,0.1844553,0.025771566,1.1819763,0.24120113,1.1819763,"up","ERI3",79033,"0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:44686765-44818707 (-) // 95.7 // p34.1"]
["11752646_a_at",-0.038259506,0.16651583,-0.045320034,-0.01599741,0.06492329,0.01599741,0.97858536,0.9386849,1.0041705,0.006004301,1.0041705,"up","KCNJ5",3762,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // traceable author statement /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0008076 // voltage-gated potassium channel complex // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030315 // T-tubule // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005242 // inward rectifier potassium channel activity // inferred from direct assay /// 0005242 // inward rectifier potassium channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015467 // G-protein activated inward rectifier potassium channel activity // traceable author statement /// 0015467 // G-protein activated inward rectifier potassium channel activity // inferred from electronic annotation","chr11:128761363-128786748 (+) // 99.25 // q24.3"]
["11729281_s_at",-0.02753067,0.02753067,0.050317764,-0.31045198,-0.0916481,0.09745026,0.687009,0.38029936,1.085472,0.11832249,1.085472,"up","PTP4A3",11156,"0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004727 // prenylated protein tyrosine phosphatase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr8:142428008-142441620 (+) // 93.07 // q24.3"]
["11757713_x_at",0.1082468,-0.033658028,-0.04709816,0.1104002,0.033658028,-0.049225807,0.90815127,0.7571259,-1.0156809,-0.02244723,1.0156809,"down","ATXN2L",11273,"","0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","","chr16:28847271-28848558 (+) // 83.31 // p11.2"]
["11744390_s_at",-0.0013246536,0.007405281,-0.06636906,0.05691719,-0.00025367737,0.00025367737,0.58309853,0.26310557,-1.0274502,-0.039068475,1.0274502,"down","TIMM8B",26521,"0006626 // protein targeting to mitochondrion // traceable author statement /// 0006626 // protein targeting to mitochondrion // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007605 // sensory perception of sound // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045039 // protein import into mitochondrial inner membrane // inferred from electronic annotation /// 0072321 // chaperone-mediated protein transport // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0042719 // mitochondrial intermembrane space protein transporter complex // traceable author statement /// 0042719 // mitochondrial intermembrane space protein transporter complex // inferred from electronic annotation","0008270 // zinc ion binding // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:111954814-111957522 (-) // 85.78 // q23.1"]
["11738207_a_at",0.0010457039,-0.06372452,-0.0010457039,-0.15992594,0.09446859,0.09589052,0.8994423,0.73838216,-1.0219934,-0.031385876,1.0219934,"down","C6orf70",55780,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:170151720-170181617 (+) // 98.22 // q27"]
["11722630_a_at",0.0766201,-0.04684639,-0.07386017,0.20946503,0.04684639,-0.24430275,0.964677,0.9006103,-1.0130451,-0.018698364,1.0130451,"down","NARG2",79664,"","0005634 // nucleus // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr15:60711807-60771344 (-) // 84.62 // q22.2"]
["11752942_s_at",0.36831522,0.11126709,0.009800911,-0.09210396,-0.12205887,-0.009801388,0.3652594,0.10066356,1.1791788,0.23778254,1.1791788,"up","DBP",1628,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048511 // rhythmic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr19:49133819-49140369 (-) // 88.81 // q13.33"]
["11721249_a_at",0.06718564,0.039271593,-0.0407331,-0.13233781,0.08436632,-0.03927183,0.77811474,0.5101578,1.035975,0.05098916,1.035975,"up","GNG2",54331,"0006112 // energy reserve metabolic process // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007191 // adenylate cyclase-activating dopamine receptor signaling pathway // inferred from sequence or structural similarity /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0071377 // cellular response to glucagon stimulus // traceable author statement /// 0071380 // cellular response to prostaglandin E stimulus // inferred from sequence or structural similarity /// 0071870 // cellular response to catecholamine stimulus // inferred from sequence or structural similarity","0005624 // membrane fraction // inferred from sequence or structural similarity /// 0005834 // heterotrimeric G-protein complex // inferred from sequence or structural similarity /// 0005834 // heterotrimeric G-protein complex // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation","chr14:52326839-52436513 (+) // 96.5 // q22.1"]
["11727683_a_at",-0.036535263,-0.08075905,0.111513615,0.09319019,-0.23741865,0.036535263,0.9199623,0.7868155,1.0238262,0.03397089,1.0238262,"up","AP3B2",8120,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation /// 0030137 // COPI-coated vesicle // traceable author statement /// 0030665 // clathrin coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0044431 // Golgi apparatus part // inferred from electronic annotation","0005215 // transporter activity // traceable author statement /// 0008565 // protein transporter activity // inferred from electronic annotation","chr15:83328032-83378660 (-) // 97.85 // q25.2"]
["11736501_x_at",-0.14468098,-0.028302193,-0.0048656464,0.0048656464,0.1079855,0.036087036,0.37914634,0.108678296,-1.0784273,-0.10892894,1.0784273,"down","SS18",6760,"0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048013 // ephrin receptor signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from direct assay","chr18:23596218-23670865 (-) // 90.84 // q11.2"]
["11756329_a_at",0.044429302,0.018286228,-0.060750484,0.017983437,-0.09988403,-0.017983437,0.7784635,0.5106882,1.0238112,0.03394972,1.0238112,"up","EEFSEC",60678,"0001514 // selenocysteine incorporation // inferred from electronic annotation /// 0006184 // GTP catabolic process // non-traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006412 // translation // inferred from electronic annotation /// 0006414 // translational elongation // non-traceable author statement","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","0000049 // tRNA binding // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // non-traceable author statement /// 0003924 // GTPase activity // non-traceable author statement /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr3:127872343-128127429 (+) // 99.94 // q21.3"]
["11719163_a_at",0.00835228,0.17097807,0.10532236,-0.23821974,-0.00835228,-0.10938072,0.27873194,0.058961626,1.159526,0.21353516,1.159526,"up","CLCN5",1184,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // traceable author statement /// 0006821 // chloride transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0007588 // excretion // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005247 // voltage-gated chloride channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0015297 // antiporter activity // inferred from electronic annotation","chrX:49687224-49863887 (+) // 92.28 // p11.23"]
["11740174_a_at",0.010263681,0.005079031,-0.0800364,-0.12879157,-0.005079031,0.04734254,0.9674213,0.909093,1.0050576,0.007278146,1.0050576,"up","NRG3",10718,"0001558 // regulation of cell growth // non-traceable author statement /// 0007171 // activation of transmembrane receptor protein tyrosine kinase activity // non-traceable author statement /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0030879 // mammary gland development // inferred from electronic annotation /// 0060596 // mammary placode formation // inferred from electronic annotation","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005102 // receptor binding // inferred from electronic annotation /// 0008083 // growth factor activity // non-traceable author statement /// 0008083 // growth factor activity // inferred from electronic annotation /// 0030297 // transmembrane receptor protein tyrosine kinase activator activity // non-traceable author statement /// 0030971 // receptor tyrosine kinase binding // non-traceable author statement","chr10:83635069-84747438 (+) // 95.34 // q23.1"]
["11733839_s_at",0.075996876,0.091312885,0.110805035,-0.14587975,-0.17861032,-0.07599735,0.056467257,0.0020871318,1.1697505,0.22620079,1.1697505,"up","ABHD2",11057,"0009611 // response to wounding // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0004091 // carboxylesterase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr15:89631380-89745591 (+) // 88.98 // q26.1"]
["11736092_at",-0.10800266,0.07545996,0.23430061,-0.07545996,-0.10821724,0.101713896,0.75110245,0.46938068,1.0677499,0.09457371,1.0677499,"up","GCA",25801,"0006944 // cellular membrane fusion // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0042803 // protein homodimerization activity // inferred from physical interaction","chr2:163200589-163219631 (+) // 94.04 // q24.2"]
["11757018_a_at",0.093307495,-0.115802765,-0.041671753,0.1352787,0.041671753,-0.047816277,0.75147605,0.47023734,-1.0456744,-0.06443375,1.0456744,"down","COL12A1",1303,"0001501 // skeletal system development // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0030199 // collagen fibril organization // non-traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005595 // collagen type XII // non-traceable author statement /// 0005595 // collagen type XII // inferred from electronic annotation /// 0005595 // collagen type XII // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay","0030020 // extracellular matrix structural constituent conferring tensile strength // non-traceable author statement","chr6:75794042-75794572 (-) // 79.34 // q13"]
["11716170_at",0.14500427,0.08937073,0.11901569,-0.2558651,-0.21598911,-0.08937073,0.07875814,0.004436318,1.2353089,0.30487183,1.2353089,"up","LMNB2",84823,"","0005634 // nucleus // inferred from electronic annotation /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005638 // lamin filament // inferred from electronic annotation /// 0005652 // nuclear lamina // non-traceable author statement /// 0005882 // intermediate filament // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation","chr19:2428163-2456994 (-) // 98.03 // p13.3"]
["11717244_at",-0.027285576,-0.039866447,-0.08224106,0.027285576,0.0931921,0.03400898,0.15939121,0.019288585,-1.0727346,-0.101293184,1.0727346,"down","LSM4",25804,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005688 // U6 snRNP // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030532 // small nuclear ribonucleoprotein complex // traceable author statement","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr19:18417716-18434084 (-) // 95.29 // p13.11"]
["11745979_a_at",-0.020088196,-0.005777359,0.005777359,-0.10465431,0.15803528,0.052588463,0.8368118,0.6128827,-1.0295538,-0.04201918,1.0295538,"down","LIG1",3978,"0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0000722 // telomere maintenance via recombination // traceable author statement /// 0000723 // telomere maintenance // traceable author statement /// 0000724 // double-strand break repair via homologous recombination // traceable author statement /// 0006259 // DNA metabolic process // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0006266 // DNA ligation // inferred from direct assay /// 0006266 // DNA ligation // inferred from electronic annotation /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement /// 0006273 // lagging strand elongation // not recorded /// 0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006284 // base-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // not recorded /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006297 // nucleotide-excision repair, DNA gap filling // traceable author statement /// 0006302 // double-strand break repair // traceable author statement /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0032201 // telomere maintenance via semi-conservative replication // traceable author statement /// 0033151 // V(D)J recombination // inferred from direct assay /// 0051103 // DNA ligation involved in DNA repair // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // not recorded /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // not recorded /// 0005739 // mitochondrion // not recorded","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003909 // DNA ligase activity // inferred from direct assay /// 0003909 // DNA ligase activity // inferred from electronic annotation /// 0003910 // DNA ligase (ATP) activity // not recorded /// 0003910 // DNA ligase (ATP) activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:48618705-48673587 (-) // 89.62 // q13.33"]
["11753371_a_at",-0.39920807,0.03391218,-0.03391218,-0.403296,0.054888725,0.1989975,0.8958192,0.73118216,-1.0594137,-0.08326603,1.0594137,"down","CYP4F2 /// CYP4F3","4051 /// 8529","0000038 // very long-chain fatty acid metabolic process // inferred from direct assay /// 0001676 // long-chain fatty acid metabolic process // inferred from direct assay /// 0003091 // renal water homeostasis // inferred from expression pattern /// 0003095 // pressure natriuresis // inferred from expression pattern /// 0006690 // icosanoid metabolic process // traceable author statement /// 0006691 // leukotriene metabolic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0008217 // regulation of blood pressure // inferred from mutant phenotype /// 0017144 // drug metabolic process // inferred from mutant phenotype /// 0019369 // arachidonic acid metabolic process // inferred from direct assay /// 0019373 // epoxygenase P450 pathway // inferred from direct assay /// 0030195 // negative regulation of blood coagulation // inferred from mutant phenotype /// 0032304 // negative regulation of icosanoid secretion // inferred from mutant phenotype /// 0032305 // positive regulation of icosanoid secretion // inferred from mutant phenotype /// 0036101 // leukotriene B4 catabolic process // inferred from direct assay /// 0036101 // leukotriene B4 catabolic process // inferred from electronic annotation /// 0042360 // vitamin E metabolic process // inferred from direct assay /// 0042371 // vitamin K biosynthetic process // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0055078 // sodium ion homeostasis // inferred from expression pattern /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005792 // microsome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from direct assay","0004497 // monooxygenase activity // traceable author statement /// 0004497 // monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008392 // arachidonic acid epoxygenase activity // inferred from direct assay /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0018685 // alkane 1-monooxygenase activity // inferred from direct assay /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047057 // vitamin-K-epoxide reductase (warfarin-sensitive) activity // inferred from mutant phenotype /// 0050051 // leukotriene-B4 20-monooxygenase activity // inferred from electronic annotation /// 0050051 // leukotriene-B4 20-monooxygenase activity // inferred from direct assay /// 0052869 // arachidonic acid omega-hydroxylase activity // inferred from direct assay /// 0052870 // tocopherol omega-hydroxylase activity // inferred from electronic annotation /// 0052871 // alpha-tocopherol omega-hydroxylase activity // inferred from electronic annotation /// 0052871 // alpha-tocopherol omega-hydroxylase activity // inferred from direct assay /// 0052872 // tocotrienol omega-hydroxylase activity // inferred from direct assay","chr19:15996732-16008881 (-) // 99.69 // p13.12"]
["11761391_at",0.15338421,0.048840284,0.011545181,-0.07379532,-0.011545181,-0.16549635,0.29537916,0.06592588,1.1133204,0.15486878,1.1133204,"up","MTTP",4547,"0006497 // protein lipidation // inferred from electronic annotation /// 0006629 // lipid metabolic process // traceable author statement /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006641 // triglyceride metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // traceable author statement /// 0006869 // lipid transport // inferred from electronic annotation /// 0042157 // lipoprotein metabolic process // traceable author statement /// 0042157 // lipoprotein metabolic process // inferred from electronic annotation /// 0042632 // cholesterol homeostasis // inferred from electronic annotation /// 0042953 // lipoprotein transport // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0051592 // response to calcium ion // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005791 // rough endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0031526 // brush border membrane // inferred from electronic annotation /// 0031528 // microvillus membrane // inferred from electronic annotation /// 0031988 // membrane-bounded vesicle // inferred from electronic annotation","0005319 // lipid transporter activity // inferred from electronic annotation /// 0005319 // lipid transporter activity // traceable author statement /// 0005488 // binding // traceable author statement /// 0008289 // lipid binding // inferred from electronic annotation /// 0034185 // apolipoprotein binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr4:100495863-100505342 (+) // 97.53 // q23"]
["11763856_a_at",0.08775425,0.07259846,0.08432865,-0.072598934,-0.07731819,-0.10631132,0.01994426,0.00013062728,1.1226981,0.16696998,1.1226981,"up","HOMER3",9454,"0006605 // protein targeting // traceable author statement /// 0007216 // G-protein coupled glutamate receptor signaling pathway // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr19:19017821-19045206 (-) // 99.13 // p13.11"]
["11753112_x_at",0.21074629,0.06549072,-0.054920673,-0.01403904,-0.05389452,0.01403904,0.6299812,0.31167668,1.0656524,0.09173689,1.0656524,"up","MED25",81857,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0035563 // positive regulation of chromatin binding // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048147 // negative regulation of fibroblast proliferation // inferred from mutant phenotype /// 0071158 // positive regulation of cell cycle arrest // inferred from mutant phenotype /// 2001178 // positive regulation of mediator complex assembly // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0042974 // retinoic acid receptor binding // inferred from physical interaction /// 0042974 // retinoic acid receptor binding // inferred from electronic annotation /// 0046965 // retinoid X receptor binding // inferred from physical interaction /// 0046965 // retinoid X receptor binding // inferred from electronic annotation","chr19:50321598-50340219 (+) // 98.93 // q13.33"]
["11743696_at",-0.15506124,-0.048484325,-0.23440695,0.24932766,0.048484325,0.2768278,0.16179292,0.019864798,-1.2635921,-0.33753085,1.2635921,"down","CLEC14A",161198,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr14:38723306-38725575 (-) // 92.87 // q21.1"]
["11732217_a_at",0.095038414,0.14926434,0.13460922,-0.16764927,-0.09559822,-0.095038414,0.04189275,0.0010695094,1.1856947,0.24573258,1.1856947,"up","BID",637,"0001836 // release of cytochrome c from mitochondria // inferred from direct assay /// 0001836 // release of cytochrome c from mitochondria // inferred from electronic annotation /// 0006626 // protein targeting to mitochondrion // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008625 // induction of apoptosis via death domain receptors // traceable author statement /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0008637 // apoptotic mitochondrial changes // traceable author statement /// 0008637 // apoptotic mitochondrial changes // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032461 // positive regulation of protein oligomerization // inferred from direct assay /// 0032464 // positive regulation of protein homooligomerization // inferred from direct assay /// 0032464 // positive regulation of protein homooligomerization // inferred from electronic annotation /// 0034349 // glial cell apoptotic process // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0046902 // regulation of mitochondrial membrane permeability // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0051402 // neuron apoptotic process // traceable author statement /// 0090150 // establishment of protein localization in membrane // inferred from direct assay /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from genetic interaction /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from mutant phenotype /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from electronic annotation /// 2000045 // regulation of G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 2001238 // positive regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation /// 0032592 // integral to mitochondrial membrane // inferred from electronic annotation","0005123 // death receptor binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from electronic annotation","chr22:18216905-18257224 (-) // 93.85 // q11.21"]
["11723352_a_at",-0.07874322,-0.0731256,0.08247018,0.09136534,-0.11509514,0.0731256,0.8638295,0.663852,-1.0278275,-0.03959816,1.0278275,"down","TMEM178A",130733,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:39893034-39945101 (+) // 93.25 // p22.1"]
["11762885_at",-0.0403924,0.00065517426,-0.17886496,0.055130243,-0.00065493584,0.06842446,0.4026361,0.12252458,-1.0821002,-0.11383403,1.0821002,"down","","","","","","chr11:35764740-35765785 (+) // 62.9 // p13"]
["11753121_s_at",0.08995032,-0.035436153,-0.18226433,0.11966562,-0.035436153,0.035436153,0.71186125,0.41388163,-1.0588307,-0.08247198,1.0588307,"down","CYP4Z1 /// CYP4Z2P","163720 /// 199974","0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004497 // monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070330 // aromatase activity // inferred from electronic annotation","chr1:47533162-47564912 (+) // 95.41 // p33 /// chr1:47333662-47366106 (-) // 97.83 // p33"]
["11762080_at",0.29392815,-0.011878252,0.011878014,-0.31146336,-0.31146336,0.017180681,0.38380992,0.11116074,1.2310517,0.29989132,1.2310517,"up",0.011878014,"","","0000160 // two-component signal transduction system (phosphorelay) // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0018106 // peptidyl-histidine phosphorylation // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation","0000155 // two-component sensor activity // inferred from electronic annotation /// 0004673 // protein histidine kinase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation"]
["11756630_a_at",-0.024384499,0.019386292,0.0007658005,-0.0007658005,-0.06105709,0.04028225,0.9518118,0.86587673,1.0040071,0.005769473,1.0040071,"up","TMED10",10972,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from direct assay /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // inferred from sequence or structural similarity /// 0007030 // Golgi organization // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0034205 // beta-amyloid formation // inferred from mutant phenotype /// 0035459 // cargo loading into vesicle // traceable author statement /// 0035964 // COPI-coated vesicle budding // inferred from direct assay /// 0045055 // regulated secretory pathway // inferred from sequence or structural similarity /// 0045055 // regulated secretory pathway // inferred from electronic annotation /// 0048199 // vesicle targeting, to, from or within Golgi // inferred from sequence or structural similarity /// 0048199 // vesicle targeting, to, from or within Golgi // inferred from electronic annotation /// 0048205 // COPI coating of Golgi vesicle // traceable author statement /// 0048208 // COPII vesicle coating // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from sequence or structural similarity /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005801 // cis-Golgi network // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from sequence or structural similarity /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030137 // COPI-coated vesicle // inferred from sequence or structural similarity /// 0030140 // trans-Golgi network transport vesicle // inferred from sequence or structural similarity /// 0030658 // transport vesicle membrane // inferred from electronic annotation /// 0030667 // secretory granule membrane // inferred from sequence or structural similarity /// 0030667 // secretory granule membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0042589 // zymogen granule membrane // inferred from sequence or structural similarity /// 0042589 // zymogen granule membrane // inferred from electronic annotation /// 0070765 // gamma-secretase complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr14:75601202-75643318 (-) // 99.92 // q24.3"]
["11725219_a_at",-0.29512024,-0.06989288,-0.11985111,0.06989288,0.14936543,0.10607338,0.16219941,0.019976433,-1.2058624,-0.27006528,1.2058624,"down","SLK",9748,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay","chr10:105727469-105788031 (+) // 96.76 // q24.33"]
["11727978_at",0.002266407,-0.0022668839,0.014658451,-0.06288481,0.015090942,-0.03282261,0.56320554,0.24392132,1.0222571,0.031758066,1.0222571,"up","SRGAP1",57522,"0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0016477 // cell migration // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // inferred from electronic annotation /// 0017048 // Rho GTPase binding // inferred from electronic annotation","chr12:64237564-64542336 (+) // 88.07 // q14.2"]
["11736352_at",0.023861408,0.00804615,-0.00804615,-0.19172668,-0.010201454,0.048852444,0.7474125,0.46426797,1.0417283,0.05897899,1.0417283,"up","TMEM220",388335,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr17:10616612-10633671 (-) // 68.5 // p13.1"]
["11746047_x_at",0.1078105,0.099935055,-0.099935055,-0.20593119,-0.13061428,0.18129873,0.8055465,0.5559812,1.0626642,0.08768571,1.0626642,"up","KGFLP2",654466,"0001541 // ovarian follicle development // inferred from electronic annotation /// 0006656 // phosphatidylcholine biosynthetic process // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation /// 0043129 // surfactant homeostasis // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0060445 // branching involved in salivary gland morphogenesis // inferred from electronic annotation /// 0060665 // regulation of branching involved in salivary gland morphogenesis by mesenchymal-epithelial signaling // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation","0005111 // type 2 fibroblast growth factor receptor binding // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation /// 0008201 // heparin binding // inferred from electronic annotation","chr9:46687437-46748386 (+) // 89.17 // p11.2 /// chr9:44245387-44306442 (+) // 87.46 // p11.2 /// chr9:41959735-42019604 (-) // 90.75 // p12 /// chr9:44341479-44402450 (-) // 88.67 // p11.2 /// chr9:46783424-46844349 (-) // 86.38 // p11.2"]
["11733686_a_at",-0.36869717,-0.07344246,-0.3231187,0.17923164,0.07344198,0.111413,0.15297644,0.017734235,-1.2981421,-0.37644827,1.2981421,"down","STRA6",64220,"0001568 // blood vessel development // inferred from mutant phenotype /// 0001822 // kidney development // inferred from mutant phenotype /// 0003184 // pulmonary valve morphogenesis // inferred from mutant phenotype /// 0003281 // ventricular septum development // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0007507 // heart development // inferred from mutant phenotype /// 0007612 // learning // inferred from mutant phenotype /// 0007631 // feeding behavior // inferred from mutant phenotype /// 0030324 // lung development // inferred from mutant phenotype /// 0030325 // adrenal gland development // inferred from mutant phenotype /// 0030540 // female genitalia development // inferred from mutant phenotype /// 0042297 // vocal learning // inferred from mutant phenotype /// 0043583 // ear development // inferred from mutant phenotype /// 0043585 // nose morphogenesis // inferred from mutant phenotype /// 0048286 // lung alveolus development // inferred from mutant phenotype /// 0048520 // positive regulation of behavior // inferred from mutant phenotype /// 0048546 // digestive tract morphogenesis // inferred from mutant phenotype /// 0048566 // embryonic digestive tract development // inferred from mutant phenotype /// 0048589 // developmental growth // inferred from mutant phenotype /// 0048745 // smooth muscle tissue development // inferred from mutant phenotype /// 0048844 // artery morphogenesis // inferred from mutant phenotype /// 0050890 // cognition // inferred from mutant phenotype /// 0050905 // neuromuscular process // inferred from mutant phenotype /// 0060322 // head development // inferred from mutant phenotype /// 0060323 // head morphogenesis // inferred from mutant phenotype /// 0060325 // face morphogenesis // inferred from mutant phenotype /// 0060426 // lung vasculature development // inferred from mutant phenotype /// 0060539 // diaphragm development // inferred from mutant phenotype /// 0060900 // embryonic camera-type eye formation // inferred from mutant phenotype /// 0061029 // eyelid development in camera-type eye // inferred from mutant phenotype /// 0061038 // uterus morphogenesis // inferred from mutant phenotype /// 0061143 // alveolar primary septum development // inferred from mutant phenotype /// 0061156 // pulmonary artery morphogenesis // inferred from mutant phenotype /// 0061205 // paramesonephric duct development // inferred from mutant phenotype","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0004872 // receptor activity // inferred from electronic annotation","chr15:74471809-74501371 (-) // 98.94 // q24.1"]
["11716317_at",0.08632326,0.015726566,0.11730623,-0.18266726,-0.01572609,-0.11727047,0.21568504,0.03544317,1.1315811,0.17833994,1.1315811,"up","CYTH2",9266,"0006897 // endocytosis // traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0007229 // integrin-mediated signaling pathway // traceable author statement /// 0016192 // vesicle-mediated transport // not recorded /// 0030036 // actin cytoskeleton organization // traceable author statement /// 0030155 // regulation of cell adhesion // not recorded /// 0032012 // regulation of ARF protein signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005622 // intracellular // non-traceable author statement /// 0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005802 // trans-Golgi network // not recorded /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005086 // ARF guanyl-nucleotide exchange factor activity // not recorded /// 0005086 // ARF guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005086 // ARF guanyl-nucleotide exchange factor activity // traceable author statement /// 0005178 // integrin binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation","chr19:48972464-48985234 (+) // 72.44 // q13.33"]
["11738287_at",0.18849277,0.04944086,-0.2056315,0.008961678,-0.008961678,-0.08849406,0.9065792,0.75255525,1.028303,0.04026547,1.028303,"up","CLEC6A",93978,"0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from sequence or structural similarity /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0045087 // innate immune response // inferred from sequence or structural similarity /// 0045087 // innate immune response // inferred from electronic annotation /// 0050715 // positive regulation of cytokine secretion // inferred from sequence or structural similarity /// 0050715 // positive regulation of cytokine secretion // inferred from electronic annotation /// 0050832 // defense response to fungus // inferred from sequence or structural similarity /// 0050832 // defense response to fungus // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0030246 // carbohydrate binding // inferred from sequence or structural similarity /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr12:8608521-8630946 (+) // 55.14 // p13.31"]
["11737921_a_at",-0.05914879,0.014205694,0.03303361,0.033353567,-0.014205456,-0.077638626,0.8976324,0.7346096,1.0108206,0.01552701,1.0108206,"up","MILR1",284021,"0033004 // negative regulation of mast cell activation // inferred from sequence or structural similarity /// 0043303 // mast cell degranulation // inferred from sequence or structural similarity","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from sequence or structural similarity","chr17:62461568-62464759 (+) // 23.62 // q23.3"]
["11721069_a_at",0.18157673,0.012853622,0.024676323,-0.012853622,-0.14884949,-0.26412678,0.31826904,0.076849565,1.1606869,0.21497878,1.1606869,"up","DGKD",8527,"0006810 // transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // non-traceable author statement /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // non-traceable author statement /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // non-traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010033 // response to organic substance // inferred from direct assay /// 0015031 // protein transport // inferred from electronic annotation /// 0016049 // cell growth // non-traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019932 // second-messenger-mediated signaling // non-traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0046339 // diacylglycerol metabolic process // inferred by curator /// 0046339 // diacylglycerol metabolic process // non-traceable author statement /// 0051260 // protein homooligomerization // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004143 // diacylglycerol kinase activity // inferred from direct assay /// 0004143 // diacylglycerol kinase activity // traceable author statement /// 0004143 // diacylglycerol kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0019992 // diacylglycerol binding // non-traceable author statement /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from direct assay","chr2:234263153-234380744 (+) // 97.86 // q37.1"]
["11749930_a_at",0.29514027,-0.016984463,0.016984463,0.07014561,-0.21796656,-0.20511866,0.4967667,0.18841834,1.1615301,0.21602659,1.1615301,"up","AP3M2",10947,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005794 // Golgi apparatus // inferred from electronic annotation /// 0030119 // AP-type membrane coat adaptor complex // traceable author statement /// 0030131 // clathrin adaptor complex // inferred from electronic annotation","","chr8:42012131-42026633 (+) // 93.41 // p11.21"]
["11719985_a_at",0.13584709,0.041294098,-0.015167236,0.015167236,-0.078598976,-0.09658432,0.41152245,0.1279931,1.0772327,0.10732995,1.0772327,"up","BLOC1S2",282991,"0007020 // microtubule nucleation // non-traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0032438 // melanosome organization // non-traceable author statement /// 0042981 // regulation of apoptotic process // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // not recorded /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0060155 // platelet dense granule organization // non-traceable author statement","0000930 // gamma-tubulin complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0031083 // BLOC-1 complex // inferred from direct assay /// 0055037 // recycling endosome // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0043015 // gamma-tubulin binding // inferred from direct assay","chr10:102033712-102046430 (-) // 74.14 // q24.31"]
["11751836_a_at",0.11391449,-0.16785097,0.19790125,-0.11391449,-0.1796956,0.25762177,0.9052109,0.7495868,1.0424545,0.05998439,1.0424545,"up","GPX6",257202,"0006979 // response to oxidative stress // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0004601 // peroxidase activity // inferred from electronic annotation /// 0004602 // glutathione peroxidase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation","chr6:28471962-28483564 (-) // 100.0 // p22.1"]
["11746862_x_at",0.032166958,-0.016551018,0.024465084,-0.11713505,0.010643005,-0.010643005,0.6035041,0.28329793,1.0369924,0.05240536,1.0369924,"up","ARSJ",79642,"0008152 // metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004065 // arylsulfatase activity // traceable author statement /// 0008484 // sulfuric ester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:114821399-114900857 (-) // 93.05 // q26"]
["11758143_s_at",-0.03322792,-0.090452194,-0.14824724,0.25025654,0.05711317,0.03322792,0.27067715,0.05548382,-1.1520274,-0.204175,1.1520274,"down","DUSP8 /// GLUD1P3","1850 /// 2749","0000188 // inactivation of MAPK activity // not recorded /// 0000188 // inactivation of MAPK activity // traceable author statement /// 0006470 // protein dephosphorylation // not recorded /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006470 // protein dephosphorylation // traceable author statement /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005634 // nucleus // not recorded /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0017017 // MAP kinase tyrosine/serine/threonine phosphatase activity // not recorded /// 0017017 // MAP kinase tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation","chr10:75493120-75493786 (+) // 91.17 // q22.2"]
["11735684_at",0.00840044,-0.046918392,-0.00840044,0.18154287,-0.0962739,0.09955263,0.7094357,0.40993714,-1.0550027,-0.07724667,1.0550027,"down","PPP1R3G",648791,"","","","chr6:5085719-5087455 (+) // 99.48 // p25.1"]
["11738173_at",-0.053566933,0.11888504,0.037236214,-0.037236214,-0.06542921,0.3693347,0.8962825,0.732155,-1.0386467,-0.054704994,1.0386467,"down","TMC2",117532,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr20:2517252-2622430 (+) // 99.59 // p13"]
["11758675_s_at",0.342566,0.21323776,0.20430994,-0.34380388,-0.20430994,-0.42141724,0.05277559,0.0017565152,1.491277,0.5765482,1.491277,"up","RABL2A /// RABL2B","11158 /// 11159","0006184 // GTP catabolic process // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation","chr2:114395643-114398943 (+) // 94.91 // q13 /// chr22:51208332-51211276 (-) // 91.27 // q13.33"]
["11722799_a_at",0.1614914,0.0044937134,-0.0044937134,0.0542078,-0.12032986,-0.21061516,0.5081575,0.19736819,1.1065558,0.14607623,1.1065558,"up","SS18",6760,"0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048013 // ephrin receptor signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from direct assay","chr18:23596216-23670601 (-) // 89.25 // q11.2"]
["11737223_a_at",-0.04120159,0.0010004044,-0.081885815,0.23117447,0.14136457,-0.0009999275,0.33217245,0.0834187,-1.1208103,-0.16454208,1.1208103,"down","ARTN",9048,"0007165 // signal transduction // traceable author statement /// 0007405 // neuroblast proliferation // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0007422 // peripheral nervous system development // inferred from electronic annotation /// 0050930 // induction of positive chemotaxis // inferred from electronic annotation /// 0061146 // Peyer's patch morphogenesis // inferred from electronic annotation /// 0097021 // lymphocyte migration into lymphoid organs // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0005102 // receptor binding // traceable author statement /// 0005102 // receptor binding // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation","chr1:44398991-44402912 (+) // 95.2 // p34.1"]
["11717089_x_at",-0.108745575,-0.14383316,-0.19305229,0.26564407,0.20698357,0.108745575,0.064031065,0.0027352069,-1.2678066,-0.34233475,1.2678066,"down","RBM39",9584,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr20:34291328-34330238 (-) // 83.17 // q11.22"]
["11730220_a_at",-0.027168274,0.027168274,0.15528679,-0.0711174,0.03169632,-0.14889526,0.51530975,0.2025873,1.0826256,0.114534445,1.0826256,"up","SPG20",23111,"0008219 // cell death // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr13:36875776-36920646 (-) // 78.83 // q13.3"]
["11755823_a_at",-0.19660902,0.11766291,0.026119232,-0.1095047,-0.026119232,0.16524935,0.9405016,0.83516836,-1.0192331,-0.027484046,1.0192331,"down","SYT9",143425,"0006810 // transport // inferred from electronic annotation /// 0017158 // regulation of calcium ion-dependent exocytosis // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // inferred from electronic annotation","0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030667 // secretory granule membrane // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031045 // dense core granule // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:7273400-7490268 (+) // 99.75 // p15.4"]
["11729361_x_at",-0.1746974,0.038434982,0.02328515,-0.06780791,-0.0018475056,0.0018475056,0.9443784,0.8451895,-1.010491,-0.015056492,1.010491,"down","DIO1",1733,"0006590 // thyroid hormone generation // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042446 // hormone biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004800 // thyroxine 5'-deiodinase activity // inferred from electronic annotation /// 0004800 // thyroxine 5'-deiodinase activity // traceable author statement /// 0008430 // selenium binding // inferred from electronic annotation /// 0008430 // selenium binding // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation","chr1:54359859-54376759 (+) // 98.99 // p32.3"]
["11752201_s_at",-0.43164015,-0.013121128,0.013121128,-0.1603527,0.024223328,0.31820726,0.67573833,0.36514086,-1.152345,-0.20457263,1.152345,"down","SP140 /// SP140L","11262 /// 93349","0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006952 // defense response // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005635 // nuclear envelope // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:231090444-231223762 (+) // 99.66 // q37.1"]
["11738170_a_at",-0.0056262016,-0.14393425,0.11967945,-0.36715174,0.0056262016,0.1574707,0.90729856,0.7546586,1.0410634,0.058057968,1.0410634,"up","ADCYAP1",116,"0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0007190 // activation of adenylate cyclase activity // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007565 // female pregnancy // traceable author statement /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // inferred from direct assay /// 0010579 // positive regulation of adenylate cyclase activity involved in G-protein coupled receptor signaling pathway // inferred from direct assay /// 0032880 // regulation of protein localization // inferred from direct assay /// 0045786 // negative regulation of cell cycle // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005625 // soluble fraction // traceable author statement","0005057 // receptor signaling protein activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005179 // hormone activity // inferred from electronic annotation /// 0005184 // neuropeptide hormone activity // traceable author statement /// 0016521 // pituitary adenylate cyclase activating polypeptide activity // inferred from direct assay /// 0051428 // peptide hormone receptor binding // inferred from direct assay /// 0051428 // peptide hormone receptor binding // inferred from physical interaction","chr18:905296-912173 (+) // 94.59 // p11.32"]
["11738330_at",-0.2611146,-0.3541131,-0.006463051,0.006463051,0.0150437355,0.19950485,0.32874495,0.08185796,-1.2149533,-0.28090087,1.2149533,"down","IL17REL",400935,"","","","chr22:50432941-50451088 (-) // 97.16 // q13.33"]
["11722108_at",-0.077035904,0.080034256,0.130023,-0.0660305,-0.13040781,0.06603098,0.6714371,0.36021754,1.0627553,0.08780952,1.0627553,"up","PCNX",22990,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr14:71374121-71582098 (+) // 96.22 // q24.2"]
["11755984_a_at",0.357378,0.20153189,0.2799301,-0.20153189,-0.39799213,-0.4913125,0.06326749,0.0026347046,1.5618172,0.64322555,1.5618172,"up","TRIML2",205860,"0016567 // protein ubiquitination // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation","chr4:189012526-189022404 (-) // 83.98 // q35.2"]
["11721797_at",0.15848255,0.05940342,-0.10442734,0.25433064,-0.06934166,-0.05940342,0.9919174,0.97686803,-1.0028058,-0.0040422874,1.0028058,"down","SUMO3",6612,"0016925 // protein sumoylation // inferred from direct assay /// 0016925 // protein sumoylation // inferred from electronic annotation","0000776 // kinetochore // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0019789 // SUMO ligase activity // inferred from electronic annotation","chr21:46225533-46238945 (-) // 69.03 // q22.3"]
["11747574_a_at",0.14806938,-0.024328232,0.024328232,0.25663996,-0.061469078,-0.14830971,0.93094397,0.81275773,1.0236596,0.03373603,1.0236596,"up","C1orf109",54955,"","","","chr1:38147359-38157921 (-) // 88.62 // p34.3"]
["11754236_a_at",0.5345354,0.07825947,-0.07825947,0.35269785,-0.11321688,-0.21866512,0.79412395,0.53741646,1.1260258,0.17123988,1.1260258,"up","PTPRF",5792,"0001960 // negative regulation of cytokine-mediated signaling pathway // inferred from electronic annotation /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007185 // transmembrane receptor protein tyrosine phosphatase signaling pathway // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0031345 // negative regulation of cell projection organization // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from direct assay /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from electronic annotation /// 0050775 // positive regulation of dendrite morphogenesis // inferred from electronic annotation /// 0050803 // regulation of synapse structure and activity // inferred from electronic annotation /// 0051387 // negative regulation of nerve growth factor receptor signaling pathway // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005626 // insoluble fraction // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0060076 // excitatory synapse // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005001 // transmembrane receptor protein tyrosine phosphatase activity // inferred from electronic annotation /// 0005001 // transmembrane receptor protein tyrosine phosphatase activity // traceable author statement /// 0005158 // insulin receptor binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0030971 // receptor tyrosine kinase binding // inferred from electronic annotation /// 0042301 // phosphate ion binding // inferred from electronic annotation","chr1:43996544-44089334 (+) // 94.56 // p34.2"]
["11726708_a_at",-0.042505264,0.042505264,-0.04408264,0.28303957,-0.10521221,0.05353117,0.7537354,0.4739047,-1.0657091,-0.091813706,1.0657091,"down","FAM195B",348262,"","","","chr17:79780302-79782432 (-) // 80.35 // q25.3"]
["11731586_at",-0.07477903,0.13822317,0.065116405,-0.3393855,-0.036186695,0.036186695,0.61935955,0.29933608,1.1141797,0.15598197,1.1141797,"up","DOK3",79930,"0007265 // Ras protein signal transduction // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005158 // insulin receptor binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation","chr5:176930087-176937404 (-) // 91.2 // q35.3"]
["11731926_a_at",-0.21896362,0.0018935204,0.03818941,-0.4553752,-0.0018935204,0.026278496,0.8607863,0.6571218,1.0599796,0.08403644,1.0599796,"up","TRPM3",80036,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from direct assay /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005261 // cation channel activity // inferred from direct assay /// 0005262 // calcium channel activity // inferred from electronic annotation","chr9:73398775-73483989 (-) // 97.9 // q21.12"]
["11721647_a_at",0.11176109,0.05887127,0.20086813,-0.071656704,-0.058870792,-0.25606298,0.19614512,0.029236875,1.1914324,0.25269705,1.1914324,"up","CTNND1 /// TMX2-CTNND1","100528016 /// 1500","0001738 // morphogenesis of a polarized epithelium // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007435 // salivary gland morphogenesis // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement /// 0060690 // epithelial cell differentiation involved in salivary gland development // inferred from electronic annotation /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from mutant phenotype","0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from mutant phenotype /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from mutant phenotype /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay","0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0019903 // protein phosphatase binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0042153 // RPTP-like protein binding // inferred from electronic annotation /// 0045296 // cadherin binding // inferred from physical interaction","chr11:57529233-57587018 (+) // 97.84 // q12.1"]
["11750767_x_at",-0.14964008,0.19327974,0.07208395,-0.121655464,-0.07155895,0.07155895,0.7915991,0.53226,1.0563781,0.079126336,1.0563781,"up","SLC17A7",57030,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006817 // phosphate ion transport // traceable author statement /// 0006817 // phosphate ion transport // inferred from electronic annotation /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007269 // neurotransmitter secretion // traceable author statement /// 0007616 // long-term memory // inferred from electronic annotation /// 0014047 // glutamate secretion // traceable author statement /// 0015813 // L-glutamate transport // traceable author statement /// 0035249 // synaptic transmission, glutamatergic // inferred from electronic annotation /// 0042137 // sequestering of neurotransmitter // inferred from electronic annotation /// 0044341 // sodium-dependent phosphate transport // traceable author statement /// 0044341 // sodium-dependent phosphate transport // inferred from electronic annotation /// 0051938 // L-glutamate import // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // traceable author statement /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048786 // presynaptic active zone // inferred from electronic annotation /// 0060076 // excitatory synapse // inferred from electronic annotation /// 0060203 // clathrin sculpted glutamate transport vesicle membrane // traceable author statement","0005313 // L-glutamate transmembrane transporter activity // traceable author statement /// 0005315 // inorganic phosphate transmembrane transporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation /// 0015319 // sodium:inorganic phosphate symporter activity // inferred from direct assay /// 0015321 // sodium-dependent phosphate transmembrane transporter activity // inferred from electronic annotation /// 0015321 // sodium-dependent phosphate transmembrane transporter activity // traceable author statement","chr19:49933242-49945617 (-) // 99.96 // q13.33"]
["11730863_at",0.023088932,0.1894207,0.13406324,-0.023088932,-0.35323143,-0.4160161,0.24201769,0.04451414,1.301014,0.37963644,1.301014,"up","CTTNBP2NL",55917,"","0015629 // actin cytoskeleton // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr1:112938652-113003786 (+) // 89.04 // p13.2"]
["11738942_at",-2.0503998e-5,-2.0503998e-5,2.0503998e-5,0.043088436,-0.009074688,0.46661234,0.6468503,0.3300187,-1.1226298,-0.16688222,1.1226298,"down","KRTAP27-1",643812,"","0005882 // intermediate filament // inferred from electronic annotation","","chr21:31709330-31710012 (-) // 100.0 // q22.11"]
["11717122_s_at",-0.034327984,0.112761974,-0.02265215,-0.018302917,0.018302917,0.12878752,0.89350873,0.7258232,-1.0170109,-0.02433518,1.0170109,"down","C6orf106",64771,"","","","chr6:34555064-34664625 (-) // 97.04 // p21.31"]
["11747809_a_at",0.037278175,-0.037278652,0.050655365,-0.08799839,-0.20738602,0.17832851,0.86132973,0.6583738,1.03951,0.05590365,1.03951,"up","PFKFB4",5210,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006000 // fructose metabolic process // inferred from electronic annotation /// 0006003 // fructose 2,6-bisphosphate metabolic process // inferred from electronic annotation /// 0006003 // fructose 2,6-bisphosphate metabolic process // non-traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006096 // glycolysis // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003873 // 6-phosphofructo-2-kinase activity // inferred from electronic annotation /// 0003873 // 6-phosphofructo-2-kinase activity // non-traceable author statement /// 0004331 // fructose-2,6-bisphosphate 2-phosphatase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation","chr3:48556927-48598605 (-) // 98.76 // p21.31"]
["11750638_a_at",0.07661438,-0.01648426,-0.025291443,0.16408825,0.01648426,-0.047881126,0.86609024,0.6685484,-1.0228662,-0.03261751,1.0228662,"down","SF3A1",10291,"0000389 // nuclear mRNA 3'-splice site recognition // traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006396 // RNA processing // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from mutant phenotype /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005684 // U2-type spliceosomal complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr22:30730124-30752911 (-) // 98.73 // q12.2"]
["11761170_at",0.005958557,-0.09386158,-0.005958557,0.09894657,0.12286091,-0.18905163,0.8856492,0.7083939,-1.0296869,-0.04220576,1.0296869,"down","ACAN",176,"0001501 // skeletal system development // non-traceable author statement /// 0001502 // cartilage condensation // inferred from electronic annotation /// 0001503 // ossification // inferred from electronic annotation /// 0002063 // chondrocyte development // inferred from electronic annotation /// 0006508 // proteolysis // non-traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0009314 // response to radiation // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009629 // response to gravity // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0010259 // multicellular organismal aging // inferred from electronic annotation /// 0010447 // response to acidity // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0021510 // spinal cord development // inferred from electronic annotation /// 0030166 // proteoglycan biosynthetic process // inferred from electronic annotation /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0060591 // chondroblast differentiation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0072534 // perineuronal net // inferred from electronic annotation","0005201 // extracellular matrix structural constituent // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005540 // hyaluronic acid binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:89346673-89394754 (+) // 82.25 // q26.1"]
["11728526_at",0.04703331,0.060622215,0.045065403,-0.1047945,-0.14729881,-0.045065403,0.10186522,0.0075437385,1.1095386,0.1499598,1.1095386,"up","PEX5L",51555,"0016558 // protein import into peroxisome matrix // not recorded /// 0042391 // regulation of membrane potential // inferred from electronic annotation /// 0043949 // regulation of cAMP-mediated signaling // inferred from sequence or structural similarity /// 0045055 // regulated secretory pathway // inferred from electronic annotation /// 0045185 // maintenance of protein location // inferred from electronic annotation /// 0051461 // positive regulation of corticotropin secretion // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005778 // peroxisomal membrane // not recorded /// 0005829 // cytosol // not recorded /// 0016020 // membrane // inferred from electronic annotation /// 0017071 // intracellular cyclic nucleotide activated cation channel complex // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0051286 // cell tip // inferred from electronic annotation","0000268 // peroxisome targeting sequence binding // inferred from direct assay /// 0005052 // peroxisome matrix targeting signal-1 binding // not recorded /// 0005221 // intracellular cyclic nucleotide activated cation channel activity // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0031267 // small GTPase binding // inferred from physical interaction","chr3:179517849-179754841 (-) // 97.57 // q26.33"]
["11736375_a_at",-0.016838312,0.013231516,-0.010414839,-0.08346033,0.010414839,0.21992922,0.82120425,0.5838631,-1.0378767,-0.053635094,1.0378767,"down","CD86",942,"0002224 // toll-like receptor signaling pathway // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0007267 // cell-cell signaling // inferred by curator /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0031295 // T cell costimulation // traceable author statement /// 0042110 // T cell activation // inferred by curator /// 0042113 // B cell activation // inferred from electronic annotation /// 0043017 // positive regulation of lymphotoxin A biosynthetic process // non-traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045086 // positive regulation of interleukin-2 biosynthetic process // non-traceable author statement /// 0045404 // positive regulation of interleukin-4 biosynthetic process // non-traceable author statement /// 0045630 // positive regulation of T-helper 2 cell differentiation // non-traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement /// 0051607 // defense response to virus // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // non-traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred by curator /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation","0004872 // receptor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015026 // coreceptor activity // non-traceable author statement","chr3:121774179-121839982 (+) // 97.2 // q13.33"]
["11740470_x_at",0.011294365,-0.12920475,-0.2114582,0.105306625,-0.011294365,0.03891182,0.36966413,0.10330634,-1.1127254,-0.15409757,1.1127254,"down","HM13",81502,"0006508 // proteolysis // inferred from electronic annotation /// 0006509 // membrane protein ectodomain proteolysis // inferred from mutant phenotype /// 0031293 // membrane protein intracellular domain proteolysis // inferred from mutant phenotype /// 0033619 // membrane protein proteolysis // inferred from direct assay","0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005791 // rough endoplasmic reticulum // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0071458 // integral to cytosolic side of endoplasmic reticulum membrane // inferred from direct assay /// 0071556 // integral to lumenal side of endoplasmic reticulum membrane // inferred from direct assay","0004190 // aspartic-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from direct assay /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042500 // aspartic endopeptidase activity, intramembrane cleaving // inferred from mutant phenotype /// 0042803 // protein homodimerization activity // inferred from direct assay","chr20:30102240-30157368 (+) // 99.37 // q11.21"]
["11761030_x_at",0.3249917,-0.3068235,-0.04256344,0.13795376,-0.09665203,0.04256344,0.9506288,0.8625017,-1.0253289,-0.036086727,1.0253289,"down","SLC11A1",6556,"0000060 // protein import into nucleus, translocation // inferred from electronic annotation /// 0001818 // negative regulation of cytokine production // inferred from sequence or structural similarity /// 0001818 // negative regulation of cytokine production // inferred from electronic annotation /// 0001819 // positive regulation of cytokine production // inferred from sequence or structural similarity /// 0001819 // positive regulation of cytokine production // inferred from electronic annotation /// 0002309 // T cell proliferation involved in immune response // inferred from sequence or structural similarity /// 0002309 // T cell proliferation involved in immune response // inferred from electronic annotation /// 0002369 // T cell cytokine production // inferred from sequence or structural similarity /// 0002369 // T cell cytokine production // inferred from electronic annotation /// 0002606 // positive regulation of dendritic cell antigen processing and presentation // inferred from sequence or structural similarity /// 0002606 // positive regulation of dendritic cell antigen processing and presentation // inferred from electronic annotation /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from sequence or structural similarity /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006826 // iron ion transport // inferred from mutant phenotype /// 0006826 // iron ion transport // inferred from electronic annotation /// 0006828 // manganese ion transport // inferred from sequence or structural similarity /// 0006828 // manganese ion transport // inferred from electronic annotation /// 0006876 // cellular cadmium ion homeostasis // inferred from genetic interaction /// 0006879 // cellular iron ion homeostasis // inferred from mutant phenotype /// 0006909 // phagocytosis // inferred from sequence or structural similarity /// 0006909 // phagocytosis // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from sequence or structural similarity /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement /// 0007035 // vacuolar acidification // inferred from sequence or structural similarity /// 0007035 // vacuolar acidification // inferred from electronic annotation /// 0009617 // response to bacterium // inferred from direct assay /// 0010628 // positive regulation of gene expression // inferred from sequence or structural similarity /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0015707 // nitrite transport // inferred from sequence or structural similarity /// 0015707 // nitrite transport // inferred from electronic annotation /// 0032147 // activation of protein kinase activity // inferred from sequence or structural similarity /// 0032147 // activation of protein kinase activity // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from sequence or structural similarity /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032623 // interleukin-2 production // inferred from sequence or structural similarity /// 0032623 // interleukin-2 production // inferred from electronic annotation /// 0032632 // interleukin-3 production // inferred from sequence or structural similarity /// 0032632 // interleukin-3 production // inferred from electronic annotation /// 0032729 // positive regulation of interferon-gamma production // inferred from sequence or structural similarity /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0034341 // response to interferon-gamma // inferred from sequence or structural similarity /// 0034341 // response to interferon-gamma // inferred from electronic annotation /// 0042060 // wound healing // inferred from sequence or structural similarity /// 0042060 // wound healing // inferred from electronic annotation /// 0042116 // macrophage activation // inferred from sequence or structural similarity /// 0042116 // macrophage activation // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from sequence or structural similarity /// 0042742 // defense response to bacterium // inferred from electronic annotation /// 0042832 // defense response to protozoan // inferred from sequence or structural similarity /// 0042832 // defense response to protozoan // inferred from electronic annotation /// 0043091 // L-arginine import // inferred from sequence or structural similarity /// 0043091 // L-arginine import // inferred from electronic annotation /// 0045342 // MHC class II biosynthetic process // inferred from sequence or structural similarity /// 0045342 // MHC class II biosynthetic process // inferred from electronic annotation /// 0045730 // respiratory burst // inferred from sequence or structural similarity /// 0045730 // respiratory burst // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048002 // antigen processing and presentation of peptide antigen // inferred from sequence or structural similarity /// 0048002 // antigen processing and presentation of peptide antigen // inferred from electronic annotation /// 0048255 // mRNA stabilization // inferred from sequence or structural similarity /// 0048255 // mRNA stabilization // inferred from electronic annotation /// 0050766 // positive regulation of phagocytosis // inferred from sequence or structural similarity /// 0050766 // positive regulation of phagocytosis // inferred from electronic annotation /// 0050829 // defense response to Gram-negative bacterium // inferred from sequence or structural similarity /// 0050829 // defense response to Gram-negative bacterium // inferred from electronic annotation /// 0055072 // iron ion homeostasis // inferred from sequence or structural similarity /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0060586 // multicellular organismal iron ion homeostasis // inferred from sequence or structural similarity /// 0060586 // multicellular organismal iron ion homeostasis // inferred from electronic annotation /// 0070574 // cadmium ion transmembrane transport // inferred from genetic interaction /// 0070839 // divalent metal ion export // inferred from sequence or structural similarity /// 0070839 // divalent metal ion export // inferred from electronic annotation /// 0071421 // manganese ion transmembrane transport // inferred from sequence or structural similarity /// 0071421 // manganese ion transmembrane transport // inferred from electronic annotation","0005764 // lysosome // inferred from sequence or structural similarity /// 0005764 // lysosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from sequence or structural similarity /// 0005770 // late endosome // inferred from electronic annotation /// 0005773 // vacuole // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from mutant phenotype /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0009279 // cell outer membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // inferred from direct assay /// 0030670 // phagocytic vesicle membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // traceable author statement /// 0070821 // tertiary granule membrane // inferred from direct assay","0005215 // transporter activity // inferred from electronic annotation /// 0005384 // manganese ion transmembrane transporter activity // inferred from sequence or structural similarity /// 0005384 // manganese ion transmembrane transporter activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046915 // transition metal ion transmembrane transporter activity // inferred from genetic interaction /// 0051139 // metal ion:hydrogen antiporter activity // inferred from genetic interaction","chr2:219246973-219252721 (+) // 84.15 // q35"]
["11759173_at",-0.1483419,-0.01036191,-0.048998356,0.18607497,0.01036191,0.31887674,0.30415037,0.070400015,-1.1818159,-0.24100527,1.1818159,"down","KRTAP20-1",337975,"","0005882 // intermediate filament // inferred from electronic annotation","","chr21:31988743-31989018 (+) // 100.0 // q22.11"]
["11716441_at",0.11840916,0.06672764,0.07568741,-0.06672764,-0.24209023,-0.22661209,0.11815345,0.010382482,1.2019843,0.26541802,1.2019843,"up","USO1",8615,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006944 // cellular membrane fusion // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0045056 // transcytosis // inferred from electronic annotation /// 0048193 // Golgi vesicle transport // inferred from electronic annotation /// 0048280 // vesicle fusion with Golgi apparatus // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0000139 // Golgi membrane // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0008565 // protein transporter activity // inferred from electronic annotation","chr4:76649705-76735431 (+) // 94.85 // q21.1"]
["11756038_x_at",0.012017012,0.08618522,0.1430521,-0.01201725,-0.26000834,-0.20569777,0.24751084,0.046702135,1.1807138,0.23965926,1.1807138,"up","ATP2B4",493,"0003407 // neural retina development // inferred from electronic annotation /// 0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0034220 // ion transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005388 // calcium-transporting ATPase activity // inferred from electronic annotation /// 0005388 // calcium-transporting ATPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:203691769-203708746 (+) // 100.0 // q32.1"]
["11757353_a_at",-0.04188156,0.04188156,-0.049826622,-0.054771423,0.11454344,0.04406023,0.7174537,0.42116228,-1.0361404,-0.051219564,1.0361404,"down","FBXO25",26260,"0016567 // protein ubiquitination // inferred from sequence or structural similarity /// 0016567 // protein ubiquitination // non-traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation","0000151 // ubiquitin ligase complex // non-traceable author statement /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0019005 // SCF ubiquitin ligase complex // inferred from sequence or structural similarity","0003779 // actin binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // non-traceable author statement","chr8:413035-419054 (+) // 96.19 // p23.3"]
["11732587_at",-0.016507149,0.13172555,-0.1270454,0.016507149,-0.02220583,0.0658648,0.91561764,0.77693427,-1.0167731,-0.023997774,1.0167731,"down","GRID1",2894,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0035235 // ionotropic glutamate receptor signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030288 // outer membrane-bounded periplasmic space // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004970 // ionotropic glutamate receptor activity // inferred from electronic annotation /// 0005215 // transporter activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005234 // extracellular-glutamate-gated ion channel activity // inferred from electronic annotation","chr10:87359310-88126458 (-) // 95.43 // q23.1"]
["11736710_a_at",0.055740356,0.25567627,0.21793318,-0.21325779,-0.055740356,-0.11267805,0.14853846,0.016683614,1.2342849,0.3036754,1.2342849,"up","DENND4A",10260,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr15:65952958-66084631 (-) // 99.5 // q22.31"]
["11741825_at",-0.05860281,-0.24124384,-0.0855093,0.05860281,0.08537817,0.10061598,0.17314811,0.022644069,-1.1566756,-0.20998427,1.1566756,"down","GBX1",2636,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0000228 // nuclear chromosome // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr7:150845675-150864867 (-) // 90.13 // q36.1"]
["11721495_a_at",0.2888317,-0.017363548,0.017363548,0.2699709,-0.048713684,-0.03751564,0.93312055,0.81776476,1.0245782,0.03503012,1.0245782,"up","SFT2D3 /// WDR33","55339 /// 84826","0006301 // postreplication repair // non-traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007283 // spermatogenesis // non-traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005581 // collagen // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:128461762-128568761 (-) // 95.37 // q14.3"]
["11753478_x_at",0.6160197,0.33360243,0.08632898,-0.08632898,-0.30364084,-0.39626598,0.18956977,0.027194295,1.5235065,0.60739565,1.5235065,"up","CCDC24",149473,"","","","chr1:44457550-44461832 (+) // 99.88 // p34.1"]
["11717014_x_at",0.026507378,-0.037055016,-0.06846428,0.08167744,0.040901184,-0.026507378,0.5569835,0.23826422,-1.0412822,-0.058361076,1.0412822,"down","SNRPF",6636,"0000387 // spliceosomal snRNP assembly // traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006396 // RNA processing // inferred from electronic annotation /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008334 // histone mRNA metabolic process // traceable author statement /// 0008380 // RNA splicing // inferred from mutant phenotype /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0034660 // ncRNA metabolic process // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005683 // U7 snRNP // inferred from direct assay /// 0005689 // U12-type spliceosomal complex // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030532 // small nuclear ribonucleoprotein complex // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0003723 // RNA binding // inferred from mutant phenotype /// 0003723 // RNA binding // inferred from electronic annotation","chr12:96252743-96260876 (+) // 89.32 // q23.1"]
["11758209_s_at",-0.22586823,-0.20087671,-0.12539005,0.27649784,0.24022484,0.12539005,0.05383652,0.0018874159,-1.3177553,-0.39808252,1.3177553,"down","ZNF644",84146,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:91406469-91487522 (-) // 100.0 // p22.2"]
["11736588_a_at",0.0052280426,0.2277503,-0.0052280426,-0.08641672,-0.15154052,0.2277503,0.8308382,0.6002451,1.0565193,0.07931908,1.0565193,"up","CTNNA3",29119,"0007155 // cell adhesion // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from physical interaction","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005916 // fascia adherens // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0045296 // cadherin binding // inferred from electronic annotation /// 0045296 // cadherin binding // traceable author statement","chr10:67679790-69455951 (-) // 95.63 // q21.3"]
["11721827_a_at",0.1357851,0.09106064,0.101109505,-0.09106064,-0.106407166,-0.26351643,0.11494805,0.009775864,1.1999546,0.26297987,1.1999546,"up","ZWILCH",55055,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007093 // mitotic cell cycle checkpoint // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr15:66797430-66841897 (+) // 97.49 // q22.31"]
["11762850_at",-0.17440557,-0.198493,0.10962868,0.31052923,-0.10962868,0.20610762,0.55465156,0.23615502,-1.1675028,-0.22342595,1.1675028,"down","ESPNP",284729,"","","0003779 // actin binding // inferred from electronic annotation","chr1:6497627-6501491 (+) // 87.02 // p36.31 /// chr1:17033418-17037114 (-) // 80.36 // p36.13"]
["11749410_x_at",0.28077745,0.107317924,0.1559,-0.107317924,-0.23354626,-0.1738491,0.08398758,0.005053344,1.2771277,0.35290283,1.2771277,"up","DMKN",93099,"","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","","chr19:35989617-36001337 (-) // 97.9 // q13.12"]
["11729479_a_at",0.196702,0.038019657,-0.096585274,-0.038019657,-0.21344066,0.08981323,0.74405396,0.4591077,1.0717199,0.09992788,1.0717199,"up","CLEC12A",160364,"","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr12:10124007-10138056 (+) // 56.83 // p13.2"]
["11762916_at",-0.44883108,-0.013735294,0.11995745,-0.21397257,0.043610573,0.013735294,0.9096881,0.7605658,-1.0439076,-0.061994076,1.0439076,"down","IZUMO1",284359,"0007155 // cell adhesion // inferred by curator /// 0007342 // fusion of sperm to egg plasma membrane // inferred from direct assay /// 0007342 // fusion of sperm to egg plasma membrane // inferred from electronic annotation","0002080 // acrosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation","0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr19:49244164-49249116 (-) // 99.7 // q13.33"]
["11722794_at",0.29843044,0.0598917,-0.055879593,0.055879593,-0.3420353,-0.37954998,0.4261334,0.13729958,1.250683,0.32271612,1.250683,"up","GDE1",51573,"0006071 // glycerol metabolic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // traceable author statement /// 0006629 // lipid metabolic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0008081 // phosphoric diester hydrolase activity // inferred from electronic annotation /// 0008889 // glycerophosphodiester phosphodiesterase activity // traceable author statement /// 0008889 // glycerophosphodiester phosphodiesterase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047395 // glycerophosphoinositol glycerophosphodiesterase activity // inferred from electronic annotation","chr16:19513014-19533439 (-) // 76.04 // p12.3"]
["11756183_x_at",0.048273087,-0.02644825,-0.06943798,0.02644825,-0.090657234,0.056230545,0.93706733,0.82659984,-1.0091996,-0.013211567,1.0091996,"down","SLC25A11",8402,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015742 // alpha-ketoglutarate transport // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0015367 // oxoglutarate:malate antiporter activity // traceable author statement","chr17:4840612-4843465 (-) // 98.55 // p13.2"]
["11745559_a_at",0.039531946,0.0066280365,0.29273462,-0.0066280365,-0.20039368,-0.01794982,0.46330422,0.16284822,1.1391481,0.18795533,1.1391481,"up","C2orf73",129852,"","","","chr2:54558070-54588714 (+) // 90.54 // p16.2"]
["11760650_a_at",-0.23761535,-0.22032666,0.021750927,0.064855814,-0.017885923,0.017885923,0.41088,0.12758233,-1.1227336,-0.16701564,1.1227336,"down","ANKRD37",353322,"","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","","chr4:186317964-186321782 (+) // 99.59 // q35.1"]
["11763416_at",-0.26136303,0.30826283,0.05257988,-0.13469791,-0.05257988,0.12425566,0.917117,0.78031933,1.0382596,0.054167245,1.0382596,"up","KBTBD3",143879,"","","","chr11:105944802-105948155 (-) // 59.3 // q22.3"]
["AFFX-DapX-5_at",0.17843819,-0.19838333,0.06564808,0.26403046,-0.12129784,-0.06564808,0.9836299,0.95223045,-1.007277,-0.010460494,1.007277,"down",0.06564808,"","","0001680 // tRNA 3'-terminal CCA addition // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006396 // RNA processing // inferred from electronic annotation /// 0006464 // cellular protein modification process // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009085 // lysine biosynthetic process // inferred from electronic annotation /// 0009089 // lysine biosynthetic process via diaminopimelate // inferred from electronic annotation /// 0019242 // methylglyoxal biosynthetic process // inferred from electronic annotation /// 0019877 // diaminopimelate biosynthetic process // inferred from electronic annotation /// 0042245 // RNA repair // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004077 // biotin-[acetyl-CoA-carboxylase] ligase activity // inferred from electronic annotation /// 0004810 // tRNA adenylyltransferase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008839 // dihydrodipicolinate reductase activity // inferred from electronic annotation /// 0008929 // methylglyoxal synthase activity // inferred from electronic annotation /// 0016437 // tRNA cytidylyltransferase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0052927 // CTP:tRNA cytidylyltransferase activity // inferred from electronic annotation /// 0052928 // CTP:3'-cytidine-tRNA cytidylyltransferase activity // inferred from electronic annotation /// 0052929 // ATP:3'-cytidine-cytidine-tRNA adenylyltransferase activity // inferred from electronic annotation /// 0070402 // NADPH binding // inferred from electronic annotation"]
["11721707_at",0.04493141,-0.06076765,0.06960869,0.11223221,-0.04493141,-0.36243486,0.7500736,0.4680764,1.083953,0.11630223,1.083953,"up","GPAM",57678,"0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006637 // acyl-CoA metabolic process // inferred from electronic annotation /// 0006641 // triglyceride metabolic process // inferred from electronic annotation /// 0006650 // glycerophospholipid metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0009750 // response to fructose stimulus // inferred from electronic annotation /// 0010867 // positive regulation of triglyceride biosynthetic process // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0016024 // CDP-diacylglycerol biosynthetic process // inferred from electronic annotation /// 0019432 // triglyceride biosynthetic process // inferred from direct assay /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0040018 // positive regulation of multicellular organism growth // inferred from electronic annotation /// 0042104 // positive regulation of activated T cell proliferation // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044255 // cellular lipid metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046686 // response to cadmium ion // inferred from electronic annotation /// 0050707 // regulation of cytokine secretion // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from electronic annotation /// 0055089 // fatty acid homeostasis // inferred from electronic annotation /// 0055091 // phospholipid homeostasis // inferred from electronic annotation /// 0070236 // negative regulation of activation-induced cell death of T cells // inferred from electronic annotation /// 0070970 // interleukin-2 secretion // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","0004366 // glycerol-3-phosphate O-acyltransferase activity // inferred from electronic annotation /// 0004366 // glycerol-3-phosphate O-acyltransferase activity // inferred from mutant phenotype /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation","chr10:113909623-113975153 (-) // 91.52 // q25.2"]
["11732475_a_at",0.32607555,-0.012088776,-0.09904909,-0.52195406,0.012088776,0.0683651,0.6969179,0.39241576,1.1637753,0.21881256,1.1637753,"up","C14orf180",400258,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr14:105046020-105056184 (+) // 95.55 // q32.33"]
["11721186_a_at",0.016964912,-0.081899166,-0.013231754,-0.07100916,0.013231754,0.09403229,0.79177624,0.53257954,-1.0267894,-0.038140345,1.0267894,"down","RABGGTA",5875,"0006464 // cellular protein modification process // traceable author statement /// 0007601 // visual perception // traceable author statement /// 0018342 // protein prenylation // inferred from electronic annotation /// 0018344 // protein geranylgeranylation // inferred from electronic annotation","","0004659 // prenyltransferase activity // inferred from electronic annotation /// 0004663 // Rab geranylgeranyltransferase activity // inferred from electronic annotation /// 0004663 // Rab geranylgeranyltransferase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008318 // protein prenyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:24734743-24740743 (-) // 94.73 // q12"]
["11761351_x_at",0.2517972,0.11822605,0.20363522,-0.11822605,-0.19599247,-0.15595007,0.049296018,0.001512962,1.272744,0.34794232,1.272744,"up","SYNGR1",9145,"0006605 // protein targeting // inferred from electronic annotation /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from sequence or structural similarity /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048172 // regulation of short-term neuronal synaptic plasticity // inferred from sequence or structural similarity /// 0048172 // regulation of short-term neuronal synaptic plasticity // inferred from electronic annotation","0005887 // integral to plasma membrane // traceable author statement /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","","chr22:39745995-39773958 (+) // 94.81 // q13.1"]
["11742028_a_at",-0.030263424,-0.26000094,0.07377148,0.030263662,-0.14636064,0.20835066,0.77754927,0.5091574,-1.0739416,-0.102915525,1.0739416,"down","ANGPT2",285,"0001525 // angiogenesis // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007281 // germ cell development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0009314 // response to radiation // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0010812 // negative regulation of cell-substrate adhesion // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0043537 // negative regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from electronic annotation /// 0048014 // Tie receptor signaling pathway // inferred from direct assay /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement /// 0050928 // negative regulation of positive chemotaxis // inferred from direct assay /// 0060135 // maternal process involved in female pregnancy // inferred from electronic annotation /// 0072012 // glomerulus vasculature development // inferred from sequence or structural similarity","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005102 // receptor binding // traceable author statement /// 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030971 // receptor tyrosine kinase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:6357176-6420784 (-) // 93.82 // p23.1"]
["11728147_s_at",0.127033,0.18659115,0.24073792,-0.28448057,-0.15540457,-0.127033,0.06750555,0.0030861944,1.2957255,0.37376007,1.2957255,"up","AQP11",282679,"0001822 // kidney development // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from direct assay /// 0006833 // water transport // inferred from direct assay /// 0015793 // glycerol transport // inferred from direct assay /// 0015840 // urea transport // inferred from direct assay /// 0048388 // endosomal lumen acidification // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation","chr11:77300679-77320913 (+) // 95.14 // q14.1"]
["11719192_a_at",0.23788118,-0.0863471,-0.084079266,0.22351503,-0.15875483,0.084079266,0.95383096,0.8696961,-1.0189818,-0.027128303,1.0189818,"down","FBXO9",26268,"0016567 // protein ubiquitination // non-traceable author statement","0000151 // ubiquitin ligase complex // non-traceable author statement","0004842 // ubiquitin-protein ligase activity // non-traceable author statement","chr6:52930191-52965839 (+) // 79.17 // p12.1"]
["11760444_x_at",0.13333702,0.101263046,0.033679962,-0.040854454,-0.090631485,-0.033679962,0.13472843,0.01369514,1.1053337,0.14448196,1.1053337,"up","HLA-C",3107,"0001539 // ciliary or flagellar motility // non-traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002480 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0050776 // regulation of immune response // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005858 // axonemal dynein complex // non-traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0031901 // early endosome membrane // traceable author statement /// 0042612 // MHC class I protein complex // inferred from electronic annotation /// 0071556 // integral to lumenal side of endoplasmic reticulum membrane // traceable author statement","0003777 // microtubule motor activity // non-traceable author statement /// 0032393 // MHC class I receptor activity // non-traceable author statement /// 0032395 // MHC class II receptor activity // non-traceable author statement","chr6:31236577-31239869 (-) // 95.36 // p21.33"]
["11747828_x_at",0.0065574646,0.05825901,-0.0065574646,0.061976433,-0.17432308,-0.14248562,0.56401324,0.24488457,1.0750202,0.10436376,1.0750202,"up","AMD1",262,"0006557 // S-adenosylmethioninamine biosynthetic process // inferred from electronic annotation /// 0006595 // polyamine metabolic process // traceable author statement /// 0006596 // polyamine biosynthetic process // inferred from electronic annotation /// 0006597 // spermine biosynthetic process // inferred from electronic annotation /// 0006597 // spermine biosynthetic process // non-traceable author statement /// 0008295 // spermidine biosynthetic process // inferred from electronic annotation /// 0008295 // spermidine biosynthetic process // non-traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005829 // cytosol // traceable author statement","0004014 // adenosylmethionine decarboxylase activity // inferred from electronic annotation /// 0004014 // adenosylmethionine decarboxylase activity // traceable author statement /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation","chr6:111135798-111214986 (+) // 99.61 // q21"]
["11746462_a_at",0.22475243,-0.1232748,-0.0187397,0.145792,0.0187397,-0.023163795,0.95505035,0.8732344,-1.0136386,-0.01954339,1.0136386,"down","LMO7",4008,"0016567 // protein ubiquitination // non-traceable author statement","0000151 // ubiquitin ligase complex // non-traceable author statement /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // traceable author statement","0004842 // ubiquitin-protein ligase activity // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr13:76334794-76432288 (+) // 99.44 // q22.2"]
["11715424_x_at",-0.03327751,0.1216774,0.03659439,-0.05160141,-0.08618927,0.03327751,0.5716792,0.25176105,1.0544586,0.07650248,1.0544586,"up","BCAP31",10134,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0006955 // immune response // non-traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0032471 // reduction of endoplasmic reticulum calcium ion concentration // inferred from mutant phenotype /// 0035584 // calcium-mediated signaling using intracellular calcium source // inferred from mutant phenotype /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0051561 // elevation of mitochondrial calcium ion concentration // inferred from mutant phenotype /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype","0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005811 // lipid particle // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation /// 0071556 // integral to lumenal side of endoplasmic reticulum membrane // traceable author statement","0004872 // receptor activity // inferred from electronic annotation /// 0005102 // receptor binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chrX:152965951-152989802 (-) // 56.42 // q28"]
["11742564_s_at",-0.2904334,0.052217484,0.04617834,-0.24409008,-0.04617834,0.3910513,0.87138164,0.679084,-1.0699971,-0.097606845,1.0699971,"down","LOC727924 /// OR4N4","283694 /// 727924","0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr15:22382472-22383423 (+) // 99.47 // q11.2"]
["11744293_a_at",-0.18071032,-0.03067875,0.030678272,-0.04072523,0.12719107,0.3225155,0.49005878,0.18329458,-1.1459658,-0.196564,1.1459658,"down","CYTH1",9267,"0016192 // vesicle-mediated transport // not recorded /// 0016192 // vesicle-mediated transport // traceable author statement /// 0030155 // regulation of cell adhesion // inferred from direct assay /// 0032012 // regulation of ARF protein signal transduction // inferred from electronic annotation /// 0090162 // establishment of epithelial cell polarity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005802 // trans-Golgi network // not recorded /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005086 // ARF guanyl-nucleotide exchange factor activity // not recorded /// 0005086 // ARF guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005086 // ARF guanyl-nucleotide exchange factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation","chr17:76670129-76778398 (-) // 98.52 // q25.3"]
["11742642_x_at",-0.21331906,0.03276515,-0.03276515,-0.1154654,0.05435586,0.14843917,0.7028605,0.40064177,-1.0719341,-0.10021622,1.0719341,"down","","","","","","chr9:69425667-69448861 (+) // 96.29 // q21.11 /// chr9:42411968-42435225 (+) // 95.52 // p12 /// chr9:43066676-43089866 (-) // 95.39 // p12 /// chr9:44050737-44074818 (-) // 94.88 // p11.2"]
["11722210_a_at",0.06634998,0.18702841,0.010390282,-0.010389805,-0.03576374,-0.04655695,0.34402922,0.089298725,1.0858512,0.118826404,1.0858512,"up","PTGS1",5742,"0001516 // prostaglandin biosynthetic process // inferred from sequence or structural similarity /// 0001516 // prostaglandin biosynthetic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // non-traceable author statement /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006692 // prostanoid metabolic process // traceable author statement /// 0006693 // prostaglandin metabolic process // inferred from electronic annotation /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from sequence or structural similarity /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0010243 // response to organic nitrogen // inferred from electronic annotation /// 0010700 // negative regulation of norepinephrine secretion // inferred from electronic annotation /// 0019371 // cyclooxygenase pathway // inferred from direct assay /// 0032811 // negative regulation of epinephrine secretion // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045907 // positive regulation of vasoconstriction // inferred from electronic annotation /// 0045987 // positive regulation of smooth muscle contraction // inferred from electronic annotation /// 0051412 // response to corticosterone stimulus // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0001750 // photoreceptor outer segment // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from sequence or structural similarity /// 0005792 // microsome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0044444 // cytoplasmic part // inferred from direct assay /// 0044444 // cytoplasmic part // inferred from electronic annotation","0004601 // peroxidase activity // inferred from electronic annotation /// 0004666 // prostaglandin-endoperoxide synthase activity // inferred from direct assay /// 0004666 // prostaglandin-endoperoxide synthase activity // inferred from electronic annotation /// 0004666 // prostaglandin-endoperoxide synthase activity // traceable author statement /// 0008289 // lipid binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:125133228-125157982 (+) // 78.08 // q33.2"]
["11732330_s_at",0.38633442,0.09266567,-0.09266567,0.2090807,-0.2114315,-0.24232197,0.66799355,0.35570192,1.1569574,0.21033573,1.1569574,"up","MAP7D1",55700,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","","chr1:36621801-36646448 (+) // 93.77 // p34.3"]
["11759145_s_at",0.2142005,-0.014001846,0.078384876,-0.13807344,-0.03809309,0.014001846,0.42998883,0.13977794,1.1072001,0.14691603,1.1072001,"up","IL1RL1",9173,"0002826 // negative regulation of T-helper 1 type immune response // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0032689 // negative regulation of interferon-gamma production // inferred from electronic annotation /// 0032754 // positive regulation of interleukin-5 production // inferred from electronic annotation /// 0038172 // interleukin-33-mediated signaling pathway // inferred from electronic annotation /// 0043032 // positive regulation of macrophage activation // inferred from electronic annotation /// 0043124 // negative regulation of I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred from electronic annotation /// 0090197 // positive regulation of chemokine secretion // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031224 // intrinsic to membrane // inferred from electronic annotation","0002113 // interleukin-33 binding // inferred from electronic annotation /// 0002114 // interleukin-33 receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004896 // cytokine receptor activity // traceable author statement /// 0004908 // interleukin-1 receptor activity // inferred from electronic annotation /// 0005057 // receptor signaling protein activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr2:102953607-102962560 (+) // 78.09 // q12.1"]
["11735436_at",-0.2386384,0.0940814,-0.25074935,-0.022550583,0.04516697,0.022550583,0.589094,0.26978278,-1.1071298,-0.14682439,1.1071298,"down","FHAD1",114827,"","","","chr1:15573729-15724623 (+) // 92.01 // p36.21"]
["11752134_a_at",-0.12062454,-0.11886406,0.11886406,-0.19253731,0.2251172,0.13354349,0.8066071,0.55770934,-1.0684968,-0.09558262,1.0684968,"down","MED12L",116931,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0016592 // mediator complex // inferred from electronic annotation","0001104 // RNA polymerase II transcription cofactor activity // inferred from electronic annotation /// 0008013 // beta-catenin binding // inferred from electronic annotation","chr3:150804180-150911532 (+) // 100.0 // q25.1"]
["11740377_a_at",0.004811287,0.1509428,0.074043274,-0.11408901,-0.06401825,-0.004811287,0.27988827,0.05942946,1.1000522,0.13757204,1.1000522,"up","PXMP4",11264,"","0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation /// 0005778 // peroxisomal membrane // inferred from direct assay /// 0005778 // peroxisomal membrane // inferred from sequence or structural similarity /// 0005778 // peroxisomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr20:32290550-32308236 (-) // 40.62 // q11.22"]
["11731990_a_at",-0.11434078,0.09313655,0.23637176,-0.34655046,-0.017352343,0.017352343,0.61178666,0.29170564,1.138583,0.1872394,1.138583,"up","CYP3A43",64816,"0006805 // xenobiotic metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004497 // monooxygenase activity // inferred from electronic annotation /// 0004497 // monooxygenase activity // inferred from sequence or structural similarity /// 0005506 // iron ion binding // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0016712 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070330 // aromatase activity // inferred from electronic annotation","chr7:99425635-99464178 (+) // 100.0 // q22.1"]
["11716772_at",0.13559437,-0.041821957,0.06999636,0.041821957,-0.12752247,-0.118103504,0.48554504,0.17997994,1.088638,0.12252423,1.088638,"up","C11orf68",83638,"","","","chr11:65684280-65686588 (-) // 93.53 // q13.1"]
["11715728_a_at",-0.5527868,-0.2943802,-0.35614777,0.3819666,0.2943802,0.36915112,0.037384983,0.00081567245,-1.6813315,-0.7496042,1.6813315,"down","ITGB1",3688,"0000082 // G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001708 // cell fate specification // inferred from electronic annotation /// 0001894 // tissue homeostasis // inferred from electronic annotation /// 0002042 // cell migration involved in sprouting angiogenesis // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0006968 // cellular defense response // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // traceable author statement /// 0007159 // leukocyte cell-cell adhesion // inferred from direct assay /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from mutant phenotype /// 0007161 // calcium-independent cell-matrix adhesion // inferred from genetic interaction /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008354 // germ cell migration // inferred from electronic annotation /// 0010811 // positive regulation of cell-substrate adhesion // inferred from electronic annotation /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0016477 // cell migration // traceable author statement /// 0030183 // B cell differentiation // inferred by curator /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0031345 // negative regulation of cell projection organization // inferred from electronic annotation /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0032594 // protein transport within lipid bilayer // inferred from electronic annotation /// 0033631 // cell-cell adhesion mediated by integrin // inferred from expression pattern /// 0034329 // cell junction assembly // traceable author statement /// 0034698 // response to gonadotropin stimulus // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from genetic interaction /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045214 // sarcomere organization // inferred from electronic annotation /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045807 // positive regulation of endocytosis // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050776 // regulation of immune response // traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0060135 // maternal process involved in female pregnancy // inferred from electronic annotation /// 0070830 // tight junction assembly // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from electronic annotation /// 0071305 // cellular response to vitamin D // inferred from electronic annotation /// 0071479 // cellular response to ionizing radiation // inferred from electronic annotation /// 0071559 // response to transforming growth factor beta stimulus // inferred from electronic annotation","0001669 // acrosomal vesicle // inferred from electronic annotation /// 0001726 // ruffle // traceable author statement /// 0005604 // basement membrane // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0008305 // integrin complex // non-traceable author statement /// 0008305 // integrin complex // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0014704 // intercalated disc // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030056 // hemidesmosome // inferred from electronic annotation /// 0031594 // neuromuscular junction // inferred from direct assay /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from direct assay /// 0034667 // alpha3-beta1 integrin complex // inferred from electronic annotation /// 0034678 // alpha8-beta1 integrin complex // traceable author statement /// 0034679 // alpha9-beta1 integrin complex // inferred from electronic annotation /// 0035748 // myelin sheath abaxonal region // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from direct assay /// 0042383 // sarcolemma // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation","0001948 // glycoprotein binding // inferred from electronic annotation /// 0001968 // fibronectin binding // inferred from electronic annotation /// 0002020 // protease binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from electronic annotation /// 0005178 // integrin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from electronic annotation /// 0019900 // kinase binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation /// 0043236 // laminin binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // non-traceable author statement /// 0051393 // alpha-actinin binding // inferred from electronic annotation","chr10:33189246-33225116 (-) // 85.61 // p11.22"]
["11744671_x_at",0.13716698,-0.010721207,0.010721207,0.16414738,-0.04771328,-0.080485344,0.8934018,0.7252825,1.023662,0.03373939,1.023662,"up","CTBP2",1488,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0019079 // viral genome replication // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0050872 // white fat cell differentiation // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from sequence or structural similarity /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0048037 // cofactor binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation","chr10:126677704-126694696 (-) // 98.9 // q26.13"]
["11717010_a_at",0.12411785,0.18788052,0.1975298,-0.26653957,-0.1874981,-0.12411785,0.049439743,0.0015443977,1.2857064,0.36256123,1.2857064,"up","MCFD2",90411,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0019752 // carboxylic acid metabolic process // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement","0005509 // calcium ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:47129012-47136317 (-) // 42.22 // p21"]
["11738960_x_at",-0.029678345,0.19485378,0.18060637,-0.3076985,0.029678345,-0.06625843,0.42553732,0.13686717,1.1728513,0.23002014,1.1728513,"up","CARD17",440068,"0006508 // proteolysis // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0004197 // cysteine-type endopeptidase activity // inferred from electronic annotation /// 0004869 // cysteine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr11:104963195-104971507 (-) // 95.06 // q22.3"]
["11732944_a_at",-0.10364723,-0.039259434,-0.05084753,0.18307066,0.122840405,0.039259434,0.15271495,0.017672207,-1.1326025,-0.17964156,1.1326025,"down","CCDC48",79825,"","","","chr3:128720149-128759583 (+) // 89.27 // q21.3"]
["11740789_at",0.43760085,0.22850227,-0.030415535,-0.09298539,0.0039584637,-0.0039582253,0.45245004,0.15521474,1.1833615,0.2428909,1.1833615,"up","CDH12",1010,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // non-traceable author statement /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0016337 // cell-cell adhesion // non-traceable author statement /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr5:21750974-22853731 (-) // 97.51 // p14.3"]
["11742583_at",-0.28059483,-0.11925316,-0.09286499,0.09286499,0.18226147,0.25511503,0.11873623,0.010507084,-1.2666209,-0.34098476,1.2666209,"down","OR10G3",26533,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr14:22037933-22038875 (-) // 100.0 // q11.2"]
["11723922_a_at",0.13084173,-0.0008006096,-0.08320379,0.07418728,-0.13427877,0.00080013275,0.8847136,0.70589024,1.024824,0.0353762,1.024824,"up","IPO13",9670,"0006606 // protein import into nucleus // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008565 // protein transporter activity // inferred from electronic annotation","chr1:44412477-44433693 (+) // 98.72 // p34.1"]
["11738470_at",-0.029358864,-0.16755438,0.029184341,-0.029184341,0.042269707,0.09292889,0.572078,0.25213358,-1.0652912,-0.091247804,1.0652912,"down","KRT84",3890,"0001942 // hair follicle development // non-traceable author statement /// 0035878 // nail development // non-traceable author statement /// 0045616 // regulation of keratinocyte differentiation // inferred from electronic annotation","0005882 // intermediate filament // inferred from electronic annotation /// 0045095 // keratin filament // inferred from direct assay /// 0045095 // keratin filament // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // non-traceable author statement /// 0030280 // structural constituent of epidermis // non-traceable author statement /// 0030280 // structural constituent of epidermis // inferred from electronic annotation","chr12:52771595-52779436 (-) // 100.0 // q13.13"]
["11757246_at",-0.289392,-0.16670465,0.16084146,-0.09840727,0.09840727,0.16472292,0.68752617,0.38101527,-1.1121304,-0.15332596,1.1121304,"down","MT1IP",644314,"","","0046872 // metal ion binding // inferred from electronic annotation","chr16:56709648-56711653 (+) // 76.21 // q13"]
["11749613_a_at",0.24266243,-0.03013134,0,0.14653969,-0.050709724,0,0.8948778,0.7289769,1.0273305,0.038900405,1.0273305,"up","OCIAD1",54940,"","0005739 // mitochondrion // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr4:48833075-48854521 (+) // 72.28 // p11"]
["11726810_s_at",-0.12010145,-0.13003826,0.096339226,-0.096339226,0.3528123,0.14818573,0.60085803,0.28066802,-1.137726,-0.18615308,1.137726,"down","C19orf77",284422,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr19:3474409-3480540 (-) // 87.8 // p13.3"]
["11741169_at",-0.42885637,-0.18784666,0.2408328,-0.39033747,0.18784666,0.19043875,0.8727923,0.6820806,-1.087694,-0.1212728,1.087694,"down","MC2R",4158,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007187 // G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger // traceable author statement /// 0030819 // positive regulation of cAMP biosynthetic process // inferred from direct assay","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004977 // melanocortin receptor activity // traceable author statement /// 0004977 // melanocortin receptor activity // inferred from electronic annotation /// 0004978 // corticotropin receptor activity // inferred from electronic annotation /// 0004978 // corticotropin receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr18:13882042-13915706 (-) // 94.64 // p11.21"]
["11748156_a_at",-0.006690979,0.001124382,-0.032583237,0.24010754,0.087088585,-0.001124382,0.4637163,0.16337723,-1.0877954,-0.121407196,1.0877954,"down","TIA1",7072,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0017148 // negative regulation of translation // inferred from electronic annotation /// 0042036 // negative regulation of cytokine biosynthetic process // inferred from electronic annotation /// 0048024 // regulation of nuclear mRNA splicing, via spliceosome // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008143 // poly(A) RNA binding // traceable author statement /// 0017091 // AU-rich element binding // inferred from electronic annotation","chr2:70456091-70475789 (-) // 99.88 // p13.3"]
["11720895_at",0.21922874,0.09021664,0.20014763,-0.09021664,-0.20693398,-0.2755766,0.09009077,0.0058770273,1.2841141,0.3607734,1.2841141,"up","SOS1",6654,"0006915 // apoptotic process // traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0032321 // positive regulation of Rho GTPase activity // traceable author statement /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005088 // Ras guanyl-nucleotide exchange factor activity // not recorded /// 0005088 // Ras guanyl-nucleotide exchange factor activity // traceable author statement /// 0005088 // Ras guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // traceable author statement /// 0005100 // Rho GTPase activator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation","chr2:39208540-39347604 (-) // 99.33 // p22.1"]
["11745008_a_at",0.13990593,0.045571804,-0.16220522,-0.10773611,-0.024794579,0.024795055,0.8704728,0.6766624,1.030732,0.043669317,1.030732,"up","KATNB1",10300,"0006605 // protein targeting // non-traceable author statement /// 0007026 // negative regulation of microtubule depolymerization // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0010942 // positive regulation of cell death // inferred from electronic annotation /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0031117 // positive regulation of microtubule depolymerization // inferred from mutant phenotype /// 0051013 // microtubule severing // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0000922 // spindle pole // inferred from direct assay /// 0000922 // spindle pole // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0008352 // katanin complex // inferred from direct assay /// 0008352 // katanin complex // traceable author statement /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0030424 // axon // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0030496 // midbody // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0008017 // microtubule binding // non-traceable author statement /// 0008568 // microtubule-severing ATPase activity // inferred from direct assay /// 0045502 // dynein binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from physical interaction","chr16:57771113-57791156 (+) // 97.75 // q21"]
["11744775_x_at",-0.042134285,-0.03155613,-0.011971474,0.021224022,0.011971474,0.06900501,0.2116285,0.03387684,-1.0443612,-0.06262081,1.0443612,"down","BZW1",9689,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016070 // RNA metabolic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay","","chr2:201676271-201688742 (+) // 98.12 // q33.1"]
["11759392_at",0,-0.17420197,-0.24422169,0,0.024994373,0.18461084,0.3395431,0.087123804,-1.1561615,-0.20934299,1.1561615,"down","KRTAP21-2",337978,"","0005882 // intermediate filament // inferred from electronic annotation","","chr21:32119111-32119551 (-) // 64.17 // q22.11"]
["11726816_at",-0.011816502,0.011816502,0.06653881,-0.450696,-0.3129139,0.04414177,0.45081222,0.15405846,1.1991419,0.26200235,1.1991419,"up","GPRIN1",114787,"0031175 // neuron projection development // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0051219 // phosphoprotein binding // inferred from electronic annotation","chr5:176022804-176037147 (-) // 94.4 // q35.2"]
["11756223_s_at",-0.21810246,-0.14408302,-0.13426018,0.1680069,0.15166664,0.13426113,0.02787815,0.0003576027,-1.2455591,-0.31679347,1.2455591,"down","DDX21",9188,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005730 // nucleolus // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004004 // ATP-dependent RNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr10:70742786-70744043 (+) // 94.27 // q22.1"]
["11740724_a_at",-0.01638794,0.01638794,0.09242916,-0.14672756,-0.2258296,0.17266273,0.76001424,0.4824759,1.0698742,0.09744112,1.0698742,"up","MOGAT3",346606,"0006071 // glycerol metabolic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0019432 // triglyceride biosynthetic process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003846 // 2-acylglycerol O-acyltransferase activity // inferred from electronic annotation /// 0004144 // diacylglycerol O-acyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation","chr7:100838840-100844303 (-) // 81.17 // q22.1"]
["11760956_x_at",-0.13653088,-0.19364119,-0.057824135,0.057824135,0.0899992,0.13896036,0.105176754,0.008040235,-1.1687179,-0.2249267,1.1687179,"down","GGNBP2",79893,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","","chr17:34900767-34938524 (+) // 72.13 // q12"]
["11757496_s_at",0.12165213,-0.07424021,-0.084302425,0.16572952,-0.028536797,0.028536797,0.76316583,0.48750255,-1.0479283,-0.06754006,1.0479283,"down","RAPGEFL1",51195,"0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005085 // guanyl-nucleotide exchange factor activity // traceable author statement","chr17:38351402-38351900 (+) // 98.61 // q21.1"]
["11724328_a_at",0.012067795,0.006509781,-0.0012311935,0.0012311935,-0.049780846,-0.03505516,0.35949492,0.09782308,1.0235988,0.033650346,1.0235988,"up","UBE2C",11065,"0000075 // cell cycle checkpoint // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0007049 // cell cycle // non-traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007051 // spindle organization // non-traceable author statement /// 0007067 // mitosis // inferred from electronic annotation /// 0007094 // mitotic cell cycle spindle assembly checkpoint // traceable author statement /// 0008054 // cyclin catabolic process // inferred from direct assay /// 0010458 // exit from mitosis // inferred from mutant phenotype /// 0010994 // free ubiquitin chain polymerization // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0031536 // positive regulation of exit from mitosis // inferred from mutant phenotype /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051488 // activation of anaphase-promoting complex activity // traceable author statement /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay","0005654 // nucleoplasm // traceable author statement /// 0005680 // anaphase-promoting complex // inferred from direct assay /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation","chr20:44441289-44445594 (+) // 91.52 // q13.12"]
["11717175_a_at",0.09960365,-0.07242584,-0.50724125,0.32369804,-0.37386894,0.07242584,0.8146935,0.5720368,-1.1230634,-0.16743943,1.1230634,"down","ABL1",25,"0000115 // regulation of transcription involved in S phase of mitotic cell cycle // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006298 // mismatch repair // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006464 // cellular protein modification process // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0006975 // DNA damage induced protein phosphorylation // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008630 // DNA damage response, signal transduction resulting in induction of apoptosis // traceable author statement /// 0010506 // regulation of autophagy // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from sequence or structural similarity /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030100 // regulation of endocytosis // traceable author statement /// 0030155 // regulation of cell adhesion // traceable author statement /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0042692 // muscle cell differentiation // traceable author statement /// 0042770 // signal transduction in response to DNA damage // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051149 // positive regulation of muscle cell differentiation // traceable author statement /// 0051353 // positive regulation of oxidoreductase activity // inferred from direct assay /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0071901 // negative regulation of protein serine/threonine kinase activity // inferred from direct assay /// 2000145 // regulation of cell motility // traceable author statement /// 2000249 // regulation of actin cytoskeleton reorganization // traceable author statement /// 2001020 // regulation of response to DNA damage stimulus // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003785 // actin monomer binding // traceable author statement /// 0004515 // nicotinate-nucleotide adenylyltransferase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from direct assay /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from direct assay /// 0030145 // manganese ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051019 // mitogen-activated protein kinase binding // inferred from physical interaction /// 0070064 // proline-rich region binding // inferred from physical interaction","chr9:133588219-133763060 (+) // 99.67 // q34.12"]
["11725787_a_at",-0.24302769,-0.064115524,0.012203217,0.31612778,0.39481592,-0.012203217,0.33658484,0.08555761,-1.2580827,-0.33122683,1.2580827,"down","TMA16",55319,"","","","chr4:164415612-164441691 (+) // 94.2 // q32.2"]
["11716230_s_at",-0.14239359,-0.16405344,-0.17347574,0.3577056,0.14239359,0.17530012,0.08093211,0.0046892944,-1.305957,-0.38510734,1.305957,"down","TMEM167B",56900,"","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:109632424-109639556 (+) // 86.76 // p13.3"]
["11750249_a_at",0.023245096,-0.004733324,-0.05227518,-0.09412789,0.004733324,0.045810938,0.9820267,0.9478359,1.0022715,0.003273413,1.0022715,"up","FAM221B",392307,"","","","chr9:35817014-35828729 (-) // 71.26 // p13.3"]
["11747771_a_at",0.16796875,0.09910965,0.09234214,-0.3502288,-0.16654968,-0.09234214,0.14508842,0.015901305,1.2507964,0.322847,1.2507964,"up","DGKB",1607,"0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004143 // diacylglycerol kinase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:14188216-14942533 (-) // 97.87 // p21.2"]
["11718042_at",-0.14482355,-0.0053696632,-0.050470352,0.09152126,0.0053696632,0.08655262,0.28499877,0.06150019,-1.0928048,-0.12803571,1.0928048,"down","MED17",9440,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0030518 // intracellular steroid hormone receptor signaling pathway // inferred from direct assay /// 0030521 // androgen receptor signaling pathway // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from direct assay /// 0016592 // mediator complex // inferred from direct assay /// 0016592 // mediator complex // inferred from electronic annotation","0001104 // RNA polymerase II transcription cofactor activity // inferred from direct assay /// 0001104 // RNA polymerase II transcription cofactor activity // inferred from electronic annotation /// 0003712 // transcription cofactor activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // traceable author statement /// 0004872 // receptor activity // inferred from direct assay /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // non-traceable author statement /// 0042809 // vitamin D receptor binding // non-traceable author statement /// 0046966 // thyroid hormone receptor binding // inferred from direct assay","chr11:93517392-93546597 (+) // 91.76 // q21"]
["11751646_a_at",0.034801483,-0.034801483,-0.035406113,0.17523098,0.11674118,-0.14519405,0.8196833,0.58092225,-1.042992,-0.060728084,1.042992,"down","MAT2B",27430,"0000096 // sulfur amino acid metabolic process // traceable author statement /// 0006556 // S-adenosylmethionine biosynthetic process // inferred from direct assay /// 0006556 // S-adenosylmethionine biosynthetic process // inferred from electronic annotation /// 0006730 // one-carbon metabolic process // inferred from electronic annotation /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0032259 // methylation // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044237 // cellular metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045226 // extracellular polysaccharide biosynthetic process // inferred from electronic annotation","0005622 // intracellular // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0048269 // methionine adenosyltransferase complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008831 // dTDP-4-dehydrorhamnose reductase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0048270 // methionine adenosyltransferase regulator activity // inferred from direct assay /// 0050662 // coenzyme binding // inferred from electronic annotation","chr5:162932953-162945555 (+) // 99.7 // q34"]
["11758844_at",0.004999876,-0.3774948,0.004495859,-0.048015118,0.08277631,-0.0044960976,0.6831567,0.3749859,-1.0963851,-0.13275465,1.0963851,"down","RAB4A /// SPHAR","10638 /// 5867","0006184 // GTP catabolic process // inferred from direct assay /// 0006184 // GTP catabolic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006260 // DNA replication // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0030100 // regulation of endocytosis // inferred from electronic annotation /// 0032781 // positive regulation of ATPase activity // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005626 // insoluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032593 // insulin-responsive compartment // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0001671 // ATPase activator activity // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from electronic annotation /// 0008565 // protein transporter activity // inferred from electronic annotation /// 0019003 // GDP binding // inferred from direct assay /// 0019905 // syntaxin binding // inferred from electronic annotation /// 0035255 // ionotropic glutamate receptor binding // inferred from electronic annotation /// 0051117 // ATPase binding // inferred from electronic annotation","chr1:229406808-229441638 (+) // 98.86 // q42.13"]
["11722896_a_at",-0.007795334,0.0063323975,-0.0063323975,0.135499,0.007795334,-0.085638046,0.9060337,0.75125724,-1.0152375,-0.021817194,1.0152375,"down","PIK3C2A",5286,"0006661 // phosphatidylinositol biosynthetic process // traceable author statement /// 0006887 // exocytosis // traceable author statement /// 0006887 // exocytosis // inferred from electronic annotation /// 0006897 // endocytosis // inferred from mutant phenotype /// 0006897 // endocytosis // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0014829 // vascular smooth muscle contraction // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0036092 // phosphatidylinositol-3-phosphate biosynthetic process // traceable author statement /// 0036092 // phosphatidylinositol-3-phosphate biosynthetic process // inferred from electronic annotation /// 0046854 // phosphatidylinositol phosphorylation // traceable author statement /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // inferred from electronic annotation /// 0048268 // clathrin coat assembly // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031982 // vesicle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016303 // 1-phosphatidylinositol-3-kinase activity // inferred from electronic annotation /// 0016303 // 1-phosphatidylinositol-3-kinase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0035004 // phosphatidylinositol 3-kinase activity // traceable author statement /// 0035005 // 1-phosphatidylinositol-4-phosphate 3-kinase activity // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr11:17108118-17229543 (-) // 95.37 // p15.1"]
["11747456_a_at",-0.27930737,0.067331314,-0.058475494,-0.005681038,0.0056815147,0.1939516,0.58682126,0.2673396,-1.1132683,-0.15480126,1.1132683,"down","GPT",2875,"0006094 // gluconeogenesis // non-traceable author statement /// 0006807 // nitrogen compound metabolic process // non-traceable author statement /// 0008652 // cellular amino acid biosynthetic process // traceable author statement /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042853 // L-alanine catabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004021 // L-alanine:2-oxoglutarate aminotransferase activity // not recorded /// 0004021 // L-alanine:2-oxoglutarate aminotransferase activity // non-traceable author statement /// 0004021 // L-alanine:2-oxoglutarate aminotransferase activity // inferred from electronic annotation /// 0008483 // transaminase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016847 // 1-aminocyclopropane-1-carboxylate synthase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation","chr8:145729508-145731788 (+) // 99.33 // q24.3"]
["11754187_s_at",0.22350407,0.040361404,-0.043310165,0.29888153,-0.056845665,-0.040361404,0.9886276,0.966338,1.0043719,0.0062935445,1.0043719,"up","EIF2AK1",27102,"0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006950 // response to stress // inferred from expression pattern /// 0006950 // response to stress // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009605 // response to external stimulus // inferred from expression pattern /// 0010467 // gene expression // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031398 // positive regulation of protein ubiquitination // inferred from electronic annotation /// 0045993 // negative regulation of translational initiation by iron // non-traceable author statement /// 0046777 // protein autophosphorylation // inferred from sequence or structural similarity /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0046986 // negative regulation of hemoglobin biosynthetic process // inferred from sequence or structural similarity /// 0046986 // negative regulation of hemoglobin biosynthetic process // inferred from electronic annotation /// 0060510 // Type II pneumocyte differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004694 // eukaryotic translation initiation factor 2alpha kinase activity // inferred from direct assay /// 0004694 // eukaryotic translation initiation factor 2alpha kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0020037 // heme binding // inferred from sequence or structural similarity /// 0020037 // heme binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr7:6063403-6098809 (-) // 95.77 // p22.1"]
["11721459_a_at",-0.4657402,-0.0005450249,0.0005450249,-0.22457552,0.17193842,0.086741924,0.7344159,0.44430712,-1.1224219,-0.16661501,1.1224219,"down","TAPBPL",55080,"0019885 // antigen processing and presentation of endogenous peptide antigen via MHC class I // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:6560837-6571468 (+) // 98.12 // p13.31"]
["11724701_x_at",-0.23720455,0.30761552,0.11422944,-0.100908756,-0.043114185,0.043113947,0.8277734,0.5946495,1.068201,0.09518307,1.068201,"up","AS3MT /// C10orf32-AS3MT","100528007 /// 57412","0009404 // toxin metabolic process // inferred from sequence or structural similarity /// 0009404 // toxin metabolic process // inferred from electronic annotation /// 0018872 // arsonoacetate metabolic process // inferred from sequence or structural similarity /// 0018872 // arsonoacetate metabolic process // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0046685 // response to arsenic-containing substance // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation","0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030791 // arsenite methyltransferase activity // inferred from sequence or structural similarity /// 0030791 // arsenite methyltransferase activity // inferred from electronic annotation /// 0030792 // methylarsonite methyltransferase activity // inferred from sequence or structural similarity /// 0030792 // methylarsonite methyltransferase activity // inferred from electronic annotation","chr10:104629226-104661652 (+) // 74.44 // q24.32"]
["11730108_a_at",0.1160202,-0.15288281,0.2398715,-0.060394764,0.060394764,-0.07217264,0.7707567,0.49864992,1.0656452,0.091727205,1.0656452,"up","ZNF793",390927,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:37997819-38034235 (+) // 49.82 // q13.12"]
["11723275_at",0.021195889,0.15413618,0.048648834,-0.08880949,-0.21833563,-0.021195889,0.28022155,0.05960473,1.1361138,0.1841073,1.1361138,"up","LOC644172 /// MAPK8IP1","644172 /// 9479","0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // traceable author statement /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007258 // JUN phosphorylation // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from sequence or structural similarity /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0043508 // negative regulation of JUN kinase activity // inferred from electronic annotation /// 0046328 // regulation of JNK cascade // inferred from sequence or structural similarity /// 0046328 // regulation of JNK cascade // inferred from electronic annotation /// 0046329 // negative regulation of JNK cascade // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0044294 // dendritic growth cone // inferred from electronic annotation /// 0044295 // axonal growth cone // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation /// 0044302 // dentate gyrus mossy fiber // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0004860 // protein kinase inhibitor activity // traceable author statement /// 0005078 // MAP-kinase scaffold activity // inferred from physical interaction /// 0005078 // MAP-kinase scaffold activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008432 // JUN kinase binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0019894 // kinesin binding // inferred from physical interaction /// 0019894 // kinesin binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0031434 // mitogen-activated protein kinase kinase binding // inferred from electronic annotation /// 0031435 // mitogen-activated protein kinase kinase kinase binding // inferred from electronic annotation","chr11:45907201-45928016 (+) // 93.43 // p11.2"]
["11750026_a_at",-0.013764381,0.074643135,0.014494896,-0.10460377,0.0005712509,-0.0005712509,0.5592095,0.24027646,1.0424603,0.059992474,1.0424603,"up","DNM1L",10059,"0003374 // dynamin polymerization involved in mitochondrial fission // inferred from direct assay /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0010821 // regulation of mitochondrion organization // inferred from mutant phenotype /// 0016559 // peroxisome fission // inferred from direct assay /// 0016559 // peroxisome fission // inferred from mutant phenotype /// 0043653 // mitochondrial fragmentation involved in apoptotic process // inferred from mutant phenotype /// 0050714 // positive regulation of protein secretion // inferred from direct assay /// 0051289 // protein homotetramerization // inferred from direct assay /// 0070584 // mitochondrion morphogenesis // inferred from mutant phenotype /// 0090141 // positive regulation of mitochondrial fission // traceable author statement /// 0090149 // membrane fission involved in mitochondrial fission // inferred from direct assay /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from mutant phenotype /// 1900063 // regulation of peroxisome organization // inferred from mutant phenotype /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction","chr12:32832253-32883995 (+) // 100.0 // p11.21"]
["11753468_x_at",-0.15670276,-0.080822945,0.080822706,-0.17486167,0.17486644,0.11450863,0.7846672,0.5210233,-1.0646694,-0.09040547,1.0646694,"down","AMT",275,"0006546 // glycine catabolic process // inferred from electronic annotation /// 0006546 // glycine catabolic process // traceable author statement /// 0032259 // methylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement","0004047 // aminomethyltransferase activity // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008483 // transaminase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr3:49454962-49459884 (-) // 100.0 // p21.31"]
["11756584_s_at",0.14082241,0.042424202,-0.042424202,-0.09748936,-0.08210087,0.066389084,0.6363403,0.31854922,1.0604485,0.0846746,1.0604485,"up","TOX4",9878,"","0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0072357 // PTW/PP1 phosphatase complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr14:21957357-21965111 (+) // 98.89 // q11.2"]
["11758238_s_at",-0.17731667,0.041015625,0.13278675,7.05719e-5,-7.05719e-5,-0.059436798,0.9473016,0.8526002,1.0130047,0.01864081,1.0130047,"up","ABCC4",10257,"0002576 // platelet degranulation // traceable author statement /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031088 // platelet dense granule membrane // inferred from direct assay /// 0031088 // platelet dense granule membrane // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016404 // 15-hydroxyprostaglandin dehydrogenase (NAD+) activity // non-traceable author statement /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation","chr13:95672089-95672621 (-) // 91.71 // q32.1"]
["11719961_s_at",0.15075397,-0.13023949,-0.044973373,0.23686504,0.044973373,-0.073031425,0.8083712,0.56092566,-1.0553747,-0.07775536,1.0553747,"down","CTBP1",1487,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0019079 // viral genome replication // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031065 // positive regulation of histone deacetylation // inferred from mutant phenotype /// 0034401 // regulation of transcription by chromatin organization // inferred from mutant phenotype /// 0035067 // negative regulation of histone acetylation // inferred from mutant phenotype /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0050872 // white fat cell differentiation // inferred from sequence or structural similarity /// 0050872 // white fat cell differentiation // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0090241 // negative regulation of histone H4 acetylation // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from direct assay /// 0017053 // transcriptional repressor complex // inferred from sequence or structural similarity /// 0017053 // transcriptional repressor complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0001106 // RNA polymerase II transcription corepressor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // traceable author statement /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0048037 // cofactor binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from sequence or structural similarity /// 0051287 // NAD binding // inferred from electronic annotation","chr4:1205232-1242909 (-) // 88.65 // p16.3"]
["11754371_a_at",0.1060915,0.033700943,-0.033700943,0.039813995,-0.03792,-0.23617363,0.60333896,0.28295064,1.0818174,0.11345699,1.0818174,"up","FAM102A",399665,"","","","chr9:130703155-130712998 (-) // 98.81 // q34.11"]
["11732896_a_at",-0.007273674,-0.07654476,-0.053920746,0.13780546,0.007273674,0.09971094,0.23951212,0.043605827,-1.0924065,-0.12750982,1.0924065,"down","HSD11B1L",374875,"0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation","chr19:5681034-5688532 (+) // 92.23 // p13.3"]
["11751767_a_at",-0.229568,-0.06389475,0.074282646,0.035102844,-0.018166542,0.018166542,0.6992246,0.3959371,-1.0605121,-0.08476103,1.0605121,"down","CKM",1158,"0006600 // creatine metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046314 // phosphocreatine biosynthetic process // inferred from electronic annotation","0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004111 // creatine kinase activity // inferred from electronic annotation /// 0004111 // creatine kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr19:45809917-45826132 (-) // 71.68 // q13.32"]
["11731861_at",-0.046205997,0.17551804,-0.08558369,-0.15778494,0.17933083,0.046205997,0.9838873,0.9528738,-1.005566,-0.008007777,1.005566,"down","ZNF720",124411,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation","chr16:31724549-31772886 (+) // 75.48 // p11.2"]
["11763778_a_at",-0.14897346,0.15610456,0.29091454,-0.24616861,0.020477295,-0.020477295,0.6247624,0.30488324,1.1339875,0.1814048,1.1339875,"up","MCM3AP-AS1",114044,"","","","chr21:47649147-47662899 (+) // 71.32 // q22.3"]
["11736704_a_at",0.3590622,0.009171486,-0.072104454,-0.009171486,0.018127918,-0.12407732,0.6873428,0.38067898,1.0996797,0.13708338,1.0996797,"up","C6",729,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0006956 // complement activation // traceable author statement /// 0006958 // complement activation, classical pathway // inferred from electronic annotation /// 0019835 // cytolysis // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005579 // membrane attack complex // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr5:41142338-41261588 (-) // 94.18 // p13.1"]
["11725854_a_at",-0.16657639,-0.00539732,0.00539732,0.18585634,-0.121854305,0.027769566,0.7429156,0.45743564,-1.0615085,-0.08611597,1.0615085,"down","KIAA0564",23078,"0006200 // ATP catabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr13:42293472-42535221 (-) // 98.77 // q14.11"]
["11731665_a_at",-0.2680521,-0.10353184,0.05735874,-0.0094099045,0.0094099045,0.22147894,0.5238238,0.20972182,-1.13176,-0.17856805,1.13176,"down","PDGFB",5155,"0001568 // blood vessel development // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001892 // embryonic placenta development // inferred from sequence or structural similarity /// 0001892 // embryonic placenta development // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // inferred from direct assay /// 0001938 // positive regulation of endothelial cell proliferation // inferred from electronic annotation /// 0002548 // monocyte chemotaxis // inferred from direct assay /// 0002576 // platelet degranulation // traceable author statement /// 0003104 // positive regulation of glomerular filtration // inferred from sequence or structural similarity /// 0003104 // positive regulation of glomerular filtration // inferred from electronic annotation /// 0006260 // DNA replication // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006929 // substrate-dependent cell migration // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from sequence or structural similarity /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007507 // heart development // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0009611 // response to wounding // inferred from direct assay /// 0009611 // response to wounding // non-traceable author statement /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010512 // negative regulation of phosphatidylinositol biosynthetic process // inferred from direct assay /// 0010544 // negative regulation of platelet activation // inferred from direct assay /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // inferred from direct assay /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014911 // positive regulation of smooth muscle cell migration // inferred from direct assay /// 0014911 // positive regulation of smooth muscle cell migration // inferred from electronic annotation /// 0016049 // cell growth // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0030031 // cell projection assembly // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from mutant phenotype /// 0030168 // platelet activation // traceable author statement /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0031954 // positive regulation of protein autophosphorylation // inferred from direct assay /// 0032147 // activation of protein kinase activity // inferred from direct assay /// 0032148 // activation of protein kinase B activity // inferred from direct assay /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0035793 // positive regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway // inferred from direct assay /// 0038001 // paracrine signaling // inferred from sequence or structural similarity /// 0038001 // paracrine signaling // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0043406 // positive regulation of MAP kinase activity // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from mutant phenotype /// 0043536 // positive regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from direct assay /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0045737 // positive regulation of cyclin-dependent protein kinase activity // inferred from direct assay /// 0045740 // positive regulation of DNA replication // inferred from direct assay /// 0045743 // positive regulation of fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0045840 // positive regulation of mitosis // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from direct assay /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0048146 // positive regulation of fibroblast proliferation // inferred from direct assay /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from direct assay /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050730 // regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0050921 // positive regulation of chemotaxis // inferred from direct assay /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0060326 // cell chemotaxis // inferred from direct assay /// 0060445 // branching involved in salivary gland morphogenesis // inferred from electronic annotation /// 0060664 // epithelial cell proliferation involved in salivary gland morphogenesis // inferred from electronic annotation /// 0061098 // positive regulation of protein tyrosine kinase activity // inferred from direct assay /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0071506 // cellular response to mycophenolic acid // inferred from sequence or structural similarity /// 0071506 // cellular response to mycophenolic acid // inferred from electronic annotation /// 0072126 // positive regulation of glomerular mesangial cell proliferation // inferred from direct assay /// 0072255 // metanephric glomerular mesangial cell development // inferred from sequence or structural similarity /// 0072255 // metanephric glomerular mesangial cell development // inferred from electronic annotation /// 0072262 // metanephric glomerular mesangial cell proliferation involved in metanephros development // inferred from electronic annotation /// 0072264 // metanephric glomerular endothelium development // inferred from electronic annotation /// 0072593 // reactive oxygen species metabolic process // inferred from mutant phenotype /// 0090280 // positive regulation of calcium ion import // inferred from direct assay /// 1900127 // positive regulation of hyaluronan biosynthetic process // inferred from direct assay /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from direct assay /// 2000573 // positive regulation of DNA biosynthetic process // inferred from direct assay /// 2000591 // positive regulation of metanephric mesenchymal cell migration // inferred from direct assay /// 2000591 // positive regulation of metanephric mesenchymal cell migration // inferred from electronic annotation","0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from sequence or structural similarity /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0031093 // platelet alpha granule lumen // traceable author statement","0005161 // platelet-derived growth factor receptor binding // inferred from direct assay /// 0005161 // platelet-derived growth factor receptor binding // inferred from physical interaction /// 0005161 // platelet-derived growth factor receptor binding // non-traceable author statement /// 0005161 // platelet-derived growth factor receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from direct assay /// 0008083 // growth factor activity // inferred from electronic annotation /// 0016176 // superoxide-generating NADPH oxidase activator activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043498 // cell surface binding // inferred from direct assay /// 0043498 // cell surface binding // inferred from electronic annotation /// 0043499 // eukaryotic cell surface binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0048407 // platelet-derived growth factor binding // inferred from physical interaction","chr22:39619363-39641060 (-) // 87.72 // q13.1"]
["11750949_a_at",0.25805044,0.01899004,0.09329414,-0.20121765,-0.12016821,-0.018989563,0.26928654,0.05477871,1.1784605,0.23690337,1.1784605,"up","NMT2",9397,"0006499 // N-terminal protein myristoylation // inferred from electronic annotation /// 0009249 // protein lipoylation // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0046788 // egress of virus within host cell // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay","0003824 // catalytic activity // traceable author statement /// 0004379 // glycylpeptide N-tetradecanoyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation","chr10:15151019-15202124 (-) // 97.54 // p13"]
["11750948_a_at",-0.2592578,0.038709164,-0.038709164,-0.12113094,0.20657492,0.31695318,0.55650276,0.23763044,-1.165179,-0.22055162,1.165179,"down","MYCN",4613,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement","0000785 // chromatin // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr2:16080685-16086607 (+) // 95.97 // p24.3"]
["11727571_a_at",-0.062429905,-0.0109882355,-0.007971287,0.00797081,0.027522087,0.043405533,0.2789986,0.059075877,-1.0377287,-0.053429272,1.0377287,"down","MARK1",4139,"0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0001764 // neuron migration // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0007010 // cytoskeleton organization // inferred from sequence or structural similarity /// 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // inferred from direct assay /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from sequence or structural similarity /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0001786 // phosphatidylserine binding // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from direct assay /// 0008289 // lipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050321 // tau-protein kinase activity // inferred from sequence or structural similarity /// 0050321 // tau-protein kinase activity // inferred from electronic annotation /// 0070300 // phosphatidic acid binding // inferred from direct assay","chr1:220701567-220837798 (+) // 97.53 // q41"]
["11745088_x_at",-0.07097578,-0.0019259453,0.045788288,-0.0119075775,0.0019264221,0.21307993,0.697654,0.39339057,-1.0546303,-0.07673732,1.0546303,"down","RPH3AL",9501,"0006886 // intracellular protein transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0006887 // exocytosis // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030658 // transport vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0008092 // cytoskeletal protein binding // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:62292-202888 (-) // 82.33 // p13.3"]
["11722041_s_at",0.05615902,0.025280476,0.04465723,-0.11355162,-0.025280476,-0.20177603,0.22832409,0.039678793,1.1138602,0.15556823,1.1138602,"up","TEX2",55852,"0006665 // sphingolipid metabolic process // non-traceable author statement /// 0007165 // signal transduction // non-traceable author statement","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation","chr17:62224794-62340660 (-) // 97.94 // q23.3"]
["11746497_a_at",0.020186424,0.117985725,-0.032939434,-0.19252443,0.014663696,-0.014663696,0.5942192,0.27413842,1.0712183,0.09925245,1.0712183,"up","MSI2",124540,"0048864 // stem cell development // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005844 // polysome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003727 // single-stranded RNA binding // inferred from electronic annotation /// 0008266 // poly(U) RNA binding // inferred from electronic annotation","chr17:55333211-55757482 (+) // 95.86 // q22"]
["11744912_a_at",0.053023815,0.111869335,-0.053023815,-0.07653427,-0.094223976,0.14537382,0.8524779,0.6413388,1.0322206,0.04575133,1.0322206,"up","NFATC4",4776,"0001569 // patterning of blood vessels // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0034644 // cellular response to UV // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0045333 // cellular respiration // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051145 // smooth muscle cell differentiation // inferred from electronic annotation /// 0055001 // muscle cell development // inferred from electronic annotation /// 0071285 // cellular response to lithium ion // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // traceable author statement","chr14:24837349-24847261 (+) // 98.33 // q12"]
["11746956_a_at",0.07201576,0.34774494,0.42691183,-0.35209513,-0.07201624,-0.13508415,0.1880243,0.026755229,1.3837878,0.46862265,1.3837878,"up","ABHD2",11057,"0009611 // response to wounding // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0004091 // carboxylesterase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr15:89631710-89745591 (+) // 91.33 // q26.1"]
["11743336_a_at",-0.01659298,0.014090538,-0.014090538,0.07316685,0.024665833,-0.035529137,0.75110245,0.46938118,-1.0183961,-0.026298855,1.0183961,"down","UIMC1",51720,"0006281 // DNA repair // inferred from electronic annotation /// 0006302 // double-strand break repair // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0010212 // response to ionizing radiation // inferred from mutant phenotype /// 0016568 // chromatin modification // inferred from electronic annotation /// 0031572 // G2/M transition DNA damage checkpoint // inferred from mutant phenotype /// 0045739 // positive regulation of DNA repair // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0070537 // histone H2A K63-linked deubiquitination // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0070531 // BRCA1-A complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0042393 // histone binding // inferred from direct assay /// 0046965 // retinoid X receptor binding // inferred from electronic annotation /// 0070530 // K63-linked polyubiquitin binding // inferred from direct assay","chr5:176332008-176433443 (-) // 96.99 // q35.2"]
["11719196_s_at",-0.044646263,-0.033979416,-0.0842762,0.07475662,0.035780907,0.033979416,0.09943842,0.0072097853,-1.0736122,-0.10247299,1.0736122,"down","FAM127B",26071,"","","","chrX:134184907-134186221 (-) // 95.96 // q26.3"]
["11744925_a_at",0.00795126,-0.008657455,-0.028793812,-0.00795126,0.016705513,0.065737724,0.5407829,0.22407365,-1.0243182,-0.03466398,1.0243182,"down","TUBGCP3",10426,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0000278 // mitotic cell cycle // traceable author statement /// 0007020 // microtubule nucleation // non-traceable author statement /// 0007020 // microtubule nucleation // inferred from electronic annotation /// 0007338 // single fertilization // non-traceable author statement","0000922 // spindle pole // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // non-traceable author statement /// 0005814 // centriole // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // non-traceable author statement /// 0005827 // polar microtubule // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation","0005198 // structural molecule activity // non-traceable author statement /// 0005200 // structural constituent of cytoskeleton // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043015 // gamma-tubulin binding // inferred from direct assay","chr13:113153122-113242440 (-) // 98.14 // q34"]
["11751615_a_at",0.05054283,0.023880959,0.019264221,-0.18671703,-0.08926296,-0.019264221,0.2787144,0.058936566,1.0940238,0.12964416,1.0940238,"up","TM9SF3",56889,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005488 // binding // inferred from direct assay","chr10:98281921-98319442 (-) // 100.0 // q24.1"]
["11760488_at",0.055421352,-0.06929493,0.0073623657,-0.18081093,-0.0073623657,0.03129387,0.794885,0.53872585,1.035353,0.050122656,1.035353,"up","SNTB1",6641,"0006936 // muscle contraction // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016010 // dystrophin-associated glycoprotein complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from electronic annotation","chr8:121823528-121824620 (+) // 91.01 // q24.12"]
["11761709_x_at",0.14661455,-0.087394714,0.16786051,-0.00997591,0.00997591,-0.057946682,0.6397984,0.32236668,1.0680721,0.095009014,1.0680721,"up","WDR13",64743,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","","chrX:48455922-48459480 (+) // 76.58 // p11.23"]
["11755505_a_at",0.017850876,-0.12542486,-0.16435575,0.013325214,0.073767185,-0.013325214,0.4189275,0.1323525,-1.0831494,-0.11523229,1.0831494,"down","ZSWIM7",125150,"0000724 // double-strand break repair via homologous recombination // inferred from mutant phenotype /// 0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0097196 // Shu complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:15881044-15902984 (-) // 88.47 // p12"]
["11728314_at",-0.015139103,-0.04463291,0.015139103,0.17620134,0.055882454,-0.15681744,0.88510084,0.7067411,-1.0280899,-0.039966397,1.0280899,"down","ZNF148",7707,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006461 // protein complex assembly // inferred from electronic annotation /// 0006968 // cellular defense response // traceable author statement /// 0007276 // gamete generation // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:124944404-125094198 (-) // 96.37 // q21.2"]
["11754000_x_at",0.05304432,-0.18646812,-0.1235466,0.24907494,0.07087326,-0.05304432,0.50899076,0.19797729,-1.1286708,-0.17462477,1.1286708,"down","CD58",965,"0007155 // cell adhesion // non-traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0016337 // cell-cell adhesion // non-traceable author statement /// 0050900 // leukocyte migration // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:117057155-117113624 (-) // 99.64 // p13.1"]
["11756184_a_at",-0.055161953,-0.004295826,0.04566002,-0.15999174,0.004295826,0.3141265,0.88510084,0.7067083,-1.0405955,-0.057409417,1.0405955,"down","UNC5CL",222643,"0007165 // signal transduction // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:40994629-40999879 (-) // 85.5 // p21.1"]
["11741308_a_at",-0.098391056,-0.027964115,0.0019030571,-0.0019035339,0.088106155,0.090130806,0.3199912,0.077660784,-1.071968,-0.100261785,1.071968,"down","XPR1",9213,"0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // traceable author statement","chr1:180601145-180859413 (+) // 95.94 // q25.3"]
["11735180_a_at",-0.13968897,-0.08290863,0.0023870468,0.16458273,0.007847786,-0.0023870468,0.41217443,0.12830436,-1.094358,-0.13008472,1.094358,"down","DLX2",1746,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007420 // brain development // traceable author statement /// 0009954 // proximal/distal pattern formation // inferred from electronic annotation /// 0021766 // hippocampus development // inferred from electronic annotation /// 0021772 // olfactory bulb development // inferred from electronic annotation /// 0021879 // forebrain neuron differentiation // inferred from electronic annotation /// 0021882 // regulation of transcription from RNA polymerase II promoter involved in forebrain neuron fate commitment // inferred from electronic annotation /// 0021892 // cerebral cortex GABAergic interneuron differentiation // inferred from electronic annotation /// 0021893 // cerebral cortex GABAergic interneuron fate commitment // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048701 // embryonic cranial skeleton morphogenesis // inferred from electronic annotation /// 0048706 // embryonic skeletal system development // inferred from electronic annotation /// 0048715 // negative regulation of oligodendrocyte differentiation // inferred from electronic annotation /// 0048755 // branching morphogenesis of a nerve // inferred from electronic annotation /// 0051216 // cartilage development // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0000976 // transcription regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003727 // single-stranded RNA binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr2:172964166-172967628 (-) // 92.85 // q31.1"]
["11728829_at",0.04317236,0.030778885,-0.054512978,0.06690693,-0.030778885,-0.10875845,0.8477946,0.63249475,1.0215002,0.030689528,1.0215002,"up","INHBB",3625,"0001541 // ovarian follicle development // non-traceable author statement /// 0006952 // defense response // traceable author statement /// 0009267 // cellular response to starvation // inferred from sequence or structural similarity /// 0009267 // cellular response to starvation // inferred from electronic annotation /// 0009605 // response to external stimulus // inferred from direct assay /// 0030154 // cell differentiation // non-traceable author statement /// 0032869 // cellular response to insulin stimulus // inferred from sequence or structural similarity /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0032924 // activin receptor signaling pathway // inferred from direct assay /// 0040007 // growth // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0044320 // cellular response to leptin stimulus // inferred from electronic annotation /// 0045444 // fat cell differentiation // inferred from sequence or structural similarity /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0046676 // negative regulation of insulin secretion // inferred from sequence or structural similarity /// 0046676 // negative regulation of insulin secretion // inferred from electronic annotation /// 0046881 // positive regulation of follicle-stimulating hormone secretion // inferred from physical interaction /// 0046882 // negative regulation of follicle-stimulating hormone secretion // inferred from physical interaction /// 0048178 // negative regulation of hepatocyte growth factor biosynthetic process // inferred from direct assay /// 0048599 // oocyte development // inferred from electronic annotation /// 0060279 // positive regulation of ovulation // inferred from sequence or structural similarity /// 0060279 // positive regulation of ovulation // inferred from electronic annotation /// 0071397 // cellular response to cholesterol // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005125 // cytokine activity // traceable author statement /// 0005179 // hormone activity // traceable author statement /// 0005179 // hormone activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046789 // host cell surface receptor binding // traceable author statement","chr2:121103717-121109383 (+) // 96.62 // q14.2"]
["11726150_s_at",-0.070218086,0.20170784,0.25148106,-0.26525497,0.070218086,-0.2780447,0.41967484,0.13300961,1.2187066,0.28535086,1.2187066,"up","PPIP5K2",23262,"0006020 // inositol metabolic process // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000827 // inositol-1,3,4,5,6-pentakisphosphate kinase activity // inferred from sequence or structural similarity /// 0000832 // inositol hexakisphosphate 5-kinase activity // inferred from sequence or structural similarity /// 0000832 // inositol hexakisphosphate 5-kinase activity // inferred from electronic annotation /// 0003993 // acid phosphatase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0033857 // diphosphoinositol-pentakisphosphate kinase activity // inferred from sequence or structural similarity /// 0033857 // diphosphoinositol-pentakisphosphate kinase activity // inferred from electronic annotation /// 0052723 // inositol hexakisphosphate 1-kinase activity // inferred from electronic annotation /// 0052724 // inositol hexakisphosphate 3-kinase activity // inferred from electronic annotation","chr5:102465256-102539222 (+) // 98.3 // q21.1"]
["11740286_a_at",-0.28944874,0.13439941,0.051044464,-0.30317688,-0.051044464,0.17781305,0.9659573,0.9050533,1.0168694,0.024134437,1.0168694,"up","ZNF626",199777,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:20802744-20844402 (-) // 71.03 // p12"]
["11757538_a_at",0.1735754,-0.0058317184,0.0076818466,0.0058317184,-0.2291584,-0.30719185,0.36375737,0.099930845,1.1771635,0.23531468,1.1771635,"up","GOT1",2805,"0000096 // sulfur amino acid metabolic process // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006103 // 2-oxoglutarate metabolic process // inferred from sequence or structural similarity /// 0006107 // oxaloacetate metabolic process // inferred from electronic annotation /// 0006114 // glycerol biosynthetic process // inferred from electronic annotation /// 0006520 // cellular amino acid metabolic process // inferred from electronic annotation /// 0006531 // aspartate metabolic process // inferred from sequence or structural similarity /// 0006531 // aspartate metabolic process // inferred from electronic annotation /// 0006532 // aspartate biosynthetic process // inferred from electronic annotation /// 0006533 // aspartate catabolic process // inferred from direct assay /// 0006536 // glutamate metabolic process // inferred from sequence or structural similarity /// 0006595 // polyamine metabolic process // traceable author statement /// 0008652 // cellular amino acid biosynthetic process // traceable author statement /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0019509 // L-methionine salvage from methylthioadenosine // traceable author statement /// 0019550 // glutamate catabolic process to aspartate // inferred from electronic annotation /// 0019551 // glutamate catabolic process to 2-oxoglutarate // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from expression pattern /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0043648 // dicarboxylic acid metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0051384 // response to glucocorticoid stimulus // inferred from expression pattern /// 0055089 // fatty acid homeostasis // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0043679 // axon terminus // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004069 // L-aspartate:2-oxoglutarate aminotransferase activity // inferred from direct assay /// 0004069 // L-aspartate:2-oxoglutarate aminotransferase activity // inferred from sequence or structural similarity /// 0004069 // L-aspartate:2-oxoglutarate aminotransferase activity // traceable author statement /// 0004069 // L-aspartate:2-oxoglutarate aminotransferase activity // inferred from electronic annotation /// 0004609 // phosphatidylserine decarboxylase activity // inferred from electronic annotation /// 0008483 // transaminase activity // traceable author statement /// 0008483 // transaminase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0031406 // carboxylic acid binding // inferred from electronic annotation /// 0080130 // L-phenylalanine:2-oxoglutarate aminotransferase activity // inferred from electronic annotation","chr10:101156684-101163803 (-) // 89.41 // q24.2"]
["11762390_at",-0.16497755,0.013253212,0.06651974,-0.013253212,0.04094124,-0.23107147,0.8978166,0.7353208,1.0276814,0.039393004,1.0276814,"up","LRRTM1",347730,"","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from direct assay /// 0030426 // growth cone // inferred from direct assay","","chr2:80525305-80531852 (-) // 93.86 // p12"]
["11759384_at",-0.2204938,0.08000398,-0.09164786,0,0,0.086891174,0.62926567,0.31083012,-1.076496,-0.106342964,1.076496,"down","DEFB128",245939,"0006952 // defense response // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","","chr20:168493-170322 (-) // 100.0 // p13"]
["11761913_at",0.024169683,0.034135103,-0.065479994,-0.13428497,0.009672165,-0.009672165,0.7613565,0.48494357,1.0298041,0.042369932,1.0298041,"up","","","","","","chr5:75440845-75442622 (+) // 67.13 // q13.3"]
["11746414_a_at",-0.0120716095,0.013887405,-0.038938522,0.047981262,-0.03799057,0.0120716095,0.79386073,0.5366451,-1.0137686,-0.019728318,1.0137686,"down","FAM107B",83641,"","","","chr10:14561519-14646417 (-) // 93.85 // p13"]
["11717970_at",-0.27144146,0.37995672,0.27908516,-0.44452477,-0.20985842,0.20985794,0.68369865,0.3757768,1.2119879,0.27737522,1.2119879,"up","FAM20B",9917,"0016310 // phosphorylation // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from direct assay","chr1:178995030-179045701 (+) // 87.94 // q25.2"]
["11746258_a_at",-0.41048717,-0.055184364,0.05518484,-0.15322828,0.11407375,0.20513201,0.65463,0.33851227,-1.1424688,-0.19215478,1.1424688,"down","SP8",221833,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0009953 // dorsal/ventral pattern formation // inferred from electronic annotation /// 0009954 // proximal/distal pattern formation // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:20821595-20826509 (-) // 94.84 // p21.1"]
["11738692_at",-0.13780808,-0.0024781227,0.0024781227,-0.05223608,0.006421566,0.2848997,0.6479901,0.33115134,-1.0909848,-0.12563103,1.0909848,"down","OR5H6",79295,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr3:97983087-97984200 (+) // 100.0 // q11.2"]
["11727388_x_at",-0.143399,-0.017040253,-0.07431126,0.017040253,0.15999436,0.045345783,0.27067715,0.055508714,-1.111399,-0.15237692,1.111399,"down","RSU1",6251,"0007165 // signal transduction // traceable author statement /// 0007265 // Ras protein signal transduction // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement","0005829 // cytosol // traceable author statement","","chr10:16633139-16859527 (-) // 70.75 // p13"]
["11757335_s_at",-0.068180084,0.0034461021,0.04107523,0.1853118,-0.011028767,-0.0034461021,0.71493554,0.41744015,-1.045963,-0.06483188,1.045963,"down","MTIF3",219402,"0006412 // translation // inferred from sequence or structural similarity /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0006446 // regulation of translational initiation // inferred from sequence or structural similarity /// 0032790 // ribosome disassembly // inferred from sequence or structural similarity","0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation","0003743 // translation initiation factor activity // inferred from electronic annotation /// 0008135 // translation factor activity, nucleic acid binding // inferred from sequence or structural similarity /// 0043024 // ribosomal small subunit binding // inferred from sequence or structural similarity","chr13:28009779-28014286 (-) // 96.77 // q12.2"]
["11745415_a_at",0.19118118,0.07138252,0.0065345764,-0.0065345764,-0.16295433,-0.18284416,0.27151552,0.055990625,1.1544005,0.20714378,1.1544005,"up","DIAPH1",1729,"0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0007605 // sensory perception of sound // traceable author statement /// 0008360 // regulation of cell shape // inferred from mutant phenotype /// 0016043 // cellular component organization // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030041 // actin filament polymerization // inferred from electronic annotation /// 0032886 // regulation of microtubule-based process // inferred from mutant phenotype /// 0035372 // protein localization to microtubule // inferred from mutant phenotype /// 0051279 // regulation of release of sequestered calcium ion into cytosol // inferred from mutant phenotype /// 0071420 // cellular response to histamine // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0072686 // mitotic spindle // inferred from direct assay","0003779 // actin binding // inferred from electronic annotation /// 0005102 // receptor binding // non-traceable author statement /// 0005522 // profilin binding // inferred from electronic annotation /// 0017048 // Rho GTPase binding // inferred from electronic annotation /// 0044325 // ion channel binding // inferred from physical interaction","chr5:140894588-140998496 (-) // 98.16 // q31.3"]
["11740203_a_at",0.03930664,0.04953289,-0.060847282,0.15117645,-0.03930664,-0.15898132,0.9292058,0.8089423,1.0175041,0.025034603,1.0175041,"up","C10orf32 /// C10orf32-AS3MT","100528007 /// 119032","","","","chr10:104613966-104624718 (+) // 96.14 // q24.32"]
["11729308_at",-0.3942542,-0.039173126,-0.018415451,0.026490211,0.4253273,0.018415451,0.46660525,0.1654916,-1.23744,-0.30735856,1.23744,"down","CLMP",79827,"","0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","","chr11:122942175-123066013 (-) // 88.85 // q24.1"]
["11751872_x_at",0.06283903,-0.04787302,-0.030263186,-0.07835436,0.030262947,0.13974953,0.8546636,0.64520633,-1.0250198,-0.03565173,1.0250198,"down","EPGN",255324,"0000165 // MAPK cascade // inferred from sequence or structural similarity /// 0000187 // activation of MAPK activity // inferred from sequence or structural similarity /// 0001525 // angiogenesis // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0045741 // positive regulation of epidermal growth factor-activated receptor activity // inferred from direct assay /// 0045840 // positive regulation of mitosis // inferred from direct assay /// 0050679 // positive regulation of epithelial cell proliferation // inferred from sequence or structural similarity","0005576 // extracellular region // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004708 // MAP kinase kinase activity // inferred from sequence or structural similarity /// 0005154 // epidermal growth factor receptor binding // inferred from direct assay /// 0008083 // growth factor activity // inferred from direct assay /// 0008083 // growth factor activity // inferred from electronic annotation","chr4:75174250-75178024 (+) // 73.4 // q13.3"]
["11716125_a_at",0.42656803,0.027301311,-0.027300835,0.45775318,-0.12434292,-0.10933685,0.9222587,0.7917175,1.047898,0.06749837,1.047898,"up","ZYX",7791,"0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0001725 // stress fiber // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0005913 // cell-cell adherens junction // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:143078172-143088204 (+) // 90.7 // q34"]
["11726095_at",0.096447945,-0.13339424,-0.07726526,0.015224934,-0.015224934,0.031901836,0.7888244,0.52791584,-1.0343357,-0.048704542,1.0343357,"down","RBMXL1",494115,"0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr1:89445516-89458516 (-) // 81.3 // p22.2"]
["11733996_a_at",-0.028689384,-0.13037872,-0.22243309,0.06381798,0.13978481,0.028689384,0.21296816,0.03434998,-1.1523651,-0.20459786,1.1523651,"down","NADKD1",133686,"0008152 // metabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation","0003951 // NAD+ kinase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr5:36192694-36242144 (-) // 84.02 // p13.2"]
["11753935_a_at",-0.015488625,-0.05362034,0.17244911,-0.28709412,0.015488625,0.08765268,0.78178066,0.5154577,1.0686314,0.095764324,1.0686314,"up","ATP6V1G3",127124,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015992 // proton transport // inferred from electronic annotation /// 0033572 // transferrin transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016471 // vacuolar proton-transporting V-type ATPase complex // inferred from electronic annotation","0008553 // hydrogen-exporting ATPase activity, phosphorylative mechanism // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0051117 // ATPase binding // inferred from physical interaction","chr1:198492353-198509805 (-) // 94.17 // q31.3"]
["11751327_a_at",0.08707619,0.05719185,0.04350853,-0.21399641,-0.07081413,-0.043508053,0.21240306,0.034129504,1.126644,0.17203175,1.126644,"up","FAM114A2",10827,"","","0017076 // purine nucleotide binding // non-traceable author statement","chr5:153372514-153418467 (-) // 99.71 // q33.2"]
["11758461_s_at",0.083082676,-0.083082676,-0.11252117,-0.09557295,0.122758865,0.1198535,0.7106247,0.41180623,-1.061806,-0.08652015,1.061806,"down","OPN1MW",2652,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007601 // visual perception // inferred from electronic annotation /// 0007601 // visual perception // traceable author statement /// 0007602 // phototransduction // inferred from electronic annotation /// 0018298 // protein-chromophore linkage // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0009881 // photoreceptor activity // inferred from electronic annotation /// 0009881 // photoreceptor activity // traceable author statement","chrX:153499015-153499469 (+) // 95.98 // q28 /// chrX:153461897-153462351 (+) // 95.98 // q28 /// chrX:153424767-153425221 (+) // 95.98 // q28"]
["11718965_s_at",0.07025719,0.24836063,0.30018902,-0.08190441,-0.10584068,-0.07025719,0.13744573,0.014252911,1.2245653,0.29226968,1.2245653,"up","NUFIP2",57532,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0042788 // polysomal ribosome // inferred from direct assay","0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr17:27582857-27621166 (-) // 94.03 // q11.2"]
["11722136_at",-0.050570726,0.20731616,0.17623472,-0.068403006,-0.027542353,0.027542353,0.5043358,0.19433758,1.0971756,0.13379444,1.0971756,"up","GUCY1A3",2982,"0006182 // cGMP biosynthetic process // traceable author statement /// 0006182 // cGMP biosynthetic process // inferred from electronic annotation /// 0007263 // nitric oxide mediated signal transduction // traceable author statement /// 0007263 // nitric oxide mediated signal transduction // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008015 // blood circulation // traceable author statement /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0009190 // cyclic nucleotide biosynthetic process // inferred from electronic annotation /// 0009635 // response to herbicide // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0030828 // positive regulation of cGMP biosynthetic process // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0052565 // response to defense-related host nitric oxide production // inferred from electronic annotation /// 0060087 // relaxation of vascular smooth muscle // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008074 // guanylate cyclase complex, soluble // traceable author statement /// 0008074 // guanylate cyclase complex, soluble // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004383 // guanylate cyclase activity // inferred from electronic annotation /// 0004383 // guanylate cyclase activity // traceable author statement /// 0004872 // receptor activity // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016849 // phosphorus-oxygen lyase activity // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0043167 // ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr4:156587876-156658211 (+) // 95.18 // q32.1"]
["11754142_x_at",0.07620716,0.018366814,-0.01836586,0.19161415,-0.032258987,-0.054346085,0.9690899,0.9137467,-1.0066767,-0.009600391,1.0066767,"down","LOC100506248 /// LOC728026 /// MIR1244-1 /// MIR1244-2 /// MIR1244-3 /// PTMA","100302285 /// 100422872 /// 100422885 /// 100506248 /// 5757 /// 728026","0006351 // transcription, DNA-dependent // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement","","chr13:82264085-82264560 (+) // 71.46 // q31.1 /// chr2:232573299-232577586 (+) // 81.67 // q37.1 /// chr3:116745427-116745909 (+) // 76.88 // q13.31 /// chr5:118309373-118309845 (+) // 73.13 // q23.1"]
["11745031_at",0.038981438,-0.0071029663,-0.08985329,0.0071029663,-0.058818817,0.056077003,0.88193774,0.70064014,-1.0145069,-0.020778729,1.0145069,"down","PPP1R2P9",80316,"0006470 // protein dephosphorylation // non-traceable author statement /// 0009966 // regulation of signal transduction // inferred from electronic annotation /// 0043666 // regulation of phosphoprotein phosphatase activity // inferred from electronic annotation","","0004864 // protein phosphatase inhibitor activity // non-traceable author statement /// 0004864 // protein phosphatase inhibitor activity // inferred from electronic annotation","chrX:42636618-42637498 (-) // 96.58 // p11.3"]
["11723059_a_at",0.2862401,-0.040080547,-0.017047405,0.11504936,-0.06397724,0.017047405,0.8673711,0.67078805,1.0378977,0.05366426,1.0378977,"up","TAP2",6891,"0001916 // positive regulation of T cell mediated cytotoxicity // not recorded /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002481 // antigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent // not recorded /// 0002485 // antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-dependent // not recorded /// 0002489 // antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent // not recorded /// 0002489 // antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent // inferred from mutant phenotype /// 0002504 // antigen processing and presentation of peptide or polysaccharide antigen via MHC class II // inferred from electronic annotation /// 0002591 // positive regulation of antigen processing and presentation of peptide antigen via MHC class I // not recorded /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006952 // defense response // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0006968 // cellular defense response // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0015833 // peptide transport // not recorded /// 0015833 // peptide transport // inferred from genetic interaction /// 0015833 // peptide transport // inferred from electronic annotation /// 0015833 // peptide transport // traceable author statement /// 0019060 // intracellular transport of viral proteins in host cell // inferred from mutant phenotype /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0019885 // antigen processing and presentation of endogenous peptide antigen via MHC class I // inferred from direct assay /// 0019885 // antigen processing and presentation of endogenous peptide antigen via MHC class I // inferred from mutant phenotype /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0046967 // cytosol to ER transport // inferred from mutant phenotype /// 0046968 // peptide antigen transport // inferred from direct assay /// 0046968 // peptide antigen transport // inferred from mutant phenotype /// 0055085 // transmembrane transport // not recorded /// 0055085 // transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005743 // mitochondrial inner membrane // not recorded /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // not recorded /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // inferred from direct assay /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0042613 // MHC class II protein complex // inferred from electronic annotation /// 0042825 // TAP complex // not recorded /// 0042825 // TAP complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005215 // transporter activity // inferred from direct assay /// 0005215 // transporter activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0015197 // peptide transporter activity // inferred from electronic annotation /// 0015197 // peptide transporter activity // inferred from genetic interaction /// 0015197 // peptide transporter activity // traceable author statement /// 0015421 // oligopeptide-transporting ATPase activity // not recorded /// 0015433 // peptide antigen-transporting ATPase activity // inferred from mutant phenotype /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042288 // MHC class I protein binding // not recorded /// 0042605 // peptide antigen binding // not recorded /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation /// 0046978 // TAP1 binding // not recorded /// 0046978 // TAP1 binding // inferred from physical interaction /// 0046979 // TAP2 binding // not recorded /// 0046980 // tapasin binding // not recorded /// 0046980 // tapasin binding // inferred from sequence or structural similarity","chr6:32793047-32806547 (-) // 76.62 // p21.32"]
["11744559_a_at",-0.20549393,0.071331024,0.017936707,-0.3438263,0.08929348,-0.017936707,0.90729356,0.7543606,1.0367594,0.052081093,1.0367594,"up","SLC25A37",51312,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0055072 // iron ion homeostasis // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr8:23398982-23429734 (+) // 90.67 // p21.2"]
["11723074_x_at",-0.20186234,-0.38828087,-0.35326958,0.3683529,0.20186234,0.24508572,0.049296018,0.0015125182,-1.5013267,-0.5862379,1.5013267,"down","BCL9L",283149,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from mutant phenotype /// 0022604 // regulation of cell morphogenesis // inferred from mutant phenotype /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from mutant phenotype /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003713 // transcription coactivator activity // non-traceable author statement /// 0008013 // beta-catenin binding // inferred from direct assay /// 0008013 // beta-catenin binding // inferred from electronic annotation","chr11:118729970-118781613 (-) // 98.06 // q23.3"]
["11744426_x_at",-0.05422592,0.0344553,0.052247047,-0.10427952,0.02695942,-0.026958466,0.714156,0.41645002,1.0321016,0.04558504,1.0321016,"up","KIAA0101",9768,"","0005634 // nucleus // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","","chr15:64657212-64673650 (-) // 74.68 // q22.31"]
["11733111_a_at",0.46180344,0.05631733,-0.05631733,0.22358465,-0.19121456,-0.271348,0.6620837,0.3476425,1.1757601,0.23359378,1.1757601,"up","TLK1",9874,"0001672 // regulation of chromatin assembly or disassembly // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006886 // intracellular protein transport // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // non-traceable author statement /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr2:171847332-172017450 (-) // 94.05 // q31.1"]
["11753315_a_at",0.0021295547,0.10945463,0.03082323,-0.28563738,-0.20446396,-0.002129078,0.32263944,0.07890707,1.1579283,0.21154597,1.1579283,"up","CELF2",10659,"0006376 // mRNA splice site selection // inferred from electronic annotation /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008016 // regulation of heart contraction // traceable author statement","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement","chr10:11207418-11317373 (+) // 99.7 // p14"]
["11749547_a_at",0.11850834,-0.032151222,-0.17908144,0.071881294,-0.052604675,0.032150745,0.8489104,0.63413495,-1.033867,-0.048050605,1.033867,"down","TMEM129",92305,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr4:1718094-1722867 (-) // 91.3 // p16.3"]
["11718516_s_at",-0.06455612,-0.03345871,0.0137043,0.25840378,0.17388535,-0.0137043,0.39081988,0.11531936,-1.1232132,-0.16763176,1.1232132,"down","TAF9",6880,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006352 // transcription initiation, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred by curator /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from mutant phenotype /// 0032435 // negative regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0060760 // positive regulation of response to cytokine stimulus // inferred from mutant phenotype /// 0070555 // response to interleukin-1 // inferred from mutant phenotype","0000125 // PCAF complex // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005669 // transcription factor TFIID complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0015030 // Cajal body // inferred from direct assay /// 0015030 // Cajal body // inferred from electronic annotation /// 0030914 // STAGA complex // inferred from direct assay /// 0033276 // transcription factor TFTC complex // inferred from direct assay /// 0070761 // pre-snoRNP complex // inferred from direct assay /// 0071339 // MLL1 complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0002039 // p53 binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0004017 // adenylate kinase activity // inferred from direct assay /// 0004017 // adenylate kinase activity // inferred from electronic annotation /// 0004402 // histone acetyltransferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0033613 // activating transcription factor binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0070742 // C2H2 zinc finger domain binding // inferred from physical interaction","chr5:68660569-68665840 (-) // 91.02 // q13.2"]
["11760781_at",-0.018490314,0.62858963,0.17244577,-0.20487499,-0.03256011,0.018490553,0.48103726,0.1762586,1.2603548,0.33382988,1.2603548,"up","DCAF5",8816,"0016567 // protein ubiquitination // inferred by curator /// 0016567 // protein ubiquitination // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0080008 // CUL4-RING ubiquitin ligase complex // inferred from direct assay","","chr14:69555923-69619700 (-) // 87.96 // q24.1"]
["11760739_at",-0.0048527718,0.0048527718,-0.24465942,-0.053169727,0.05316925,0.13610697,0.5859342,0.26613745,-1.0919615,-0.126922,1.0919615,"down","LOC100289533",100289533,"","","","chr18:21977239-21981171 (+) // 86.54 // q11.2"]
["11755456_a_at",0.25963783,0.01550293,-0.01550293,0.085339546,-0.058084488,-0.10835457,0.65463,0.33854347,1.081909,0.11357908,1.081909,"up","AP2S1",1175,"0006810 // transport // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0015031 // protein transport // non-traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral reproduction // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0030100 // regulation of endocytosis // traceable author statement /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048268 // clathrin coat assembly // traceable author statement /// 0050690 // regulation of defense response to virus by virus // traceable author statement","0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation /// 0030122 // AP-2 adaptor complex // traceable author statement /// 0030122 // AP-2 adaptor complex // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement","0005215 // transporter activity // non-traceable author statement /// 0008565 // protein transporter activity // non-traceable author statement /// 0008565 // protein transporter activity // inferred from electronic annotation","chr19:47341574-47354045 (-) // 97.76 // q13.32"]
["11722311_a_at",0.196805,0.025636673,-0.008022308,0.008022308,-0.19595146,-0.439682,0.40409565,0.12329437,1.2147647,0.2806769,1.2147647,"up","COQ2",27235,"0006071 // glycerol metabolic process // inferred from genetic interaction /// 0006744 // ubiquinone biosynthetic process // inferred from direct assay /// 0006744 // ubiquinone biosynthetic process // inferred from electronic annotation /// 0008299 // isoprenoid biosynthetic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation","0005739 // mitochondrion // inferred from reviewed computational analysis /// 0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from reviewed computational analysis /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","0002083 // 4-hydroxybenzoate decaprenyltransferase activity // inferred from electronic annotation /// 0004659 // prenyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0047293 // 4-hydroxybenzoate nonaprenyltransferase activity // inferred from electronic annotation","chr4:84184976-84206067 (-) // 96.87 // q21.23"]
["11735097_x_at",0.10149765,0.0662756,0.10057545,-0.14019966,-0.0662756,-0.082541466,0.053301033,0.0018160874,1.1374384,0.18578844,1.1374384,"up","MLX",6945,"0006112 // energy reserve metabolic process // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0031325 // positive regulation of cellular metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0008134 // transcription factor binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from physical interaction","chr17:40719077-40725257 (+) // 97.79 // q21.2"]
["11759405_x_at",0.098605156,0.07608795,0.02679348,-0.028666496,-0.02679348,-0.051686287,0.11873623,0.010505305,1.0739133,0.10287757,1.0739133,"up","STX10",8677,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0042147 // retrograde transport, endosome to Golgi // inferred from direct assay /// 0048193 // Golgi vesicle transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0000139 // Golgi membrane // traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005484 // SNAP receptor activity // inferred from electronic annotation","chr19:13254875-13261188 (-) // 97.89 // p13.2"]
["11738713_x_at",-0.24790168,-0.17813587,0.086820126,-0.046477795,0.13729525,0.046477795,0.5578841,0.23913154,-1.1163872,-0.15883754,1.1163872,"down","OR52K2",119774,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:4470524-4471591 (+) // 100.0 // p15.4"]
["11730613_at",0.120453835,0.005530834,-0.052807808,0.06051731,-0.005530834,-0.09032202,0.84001505,0.6182218,1.0253886,0.036170762,1.0253886,"up","MBOAT7",79143,"0006644 // phospholipid metabolic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation","chr19:54681993-54693733 (-) // 82.66 // q13.42"]
["11747132_at",-0.06334591,-0.019803524,0.028038979,-0.10390377,0.019803524,0.15570402,0.84298563,0.6232581,-1.02971,-0.04223816,1.02971,"down","","","","","","chr22:38820292-38823906 (+) // 83.5 // q13.1"]
["11751971_a_at",-0.17502904,0.44972563,-0.07008958,0.07008958,0.07180214,-0.09738088,0.926857,0.8038765,1.0376828,0.053365465,1.0376828,"up","PAPPA2",60676,"0001558 // regulation of cell growth // non-traceable author statement /// 0006508 // proteolysis // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005622 // intracellular // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from direct assay /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:176432306-176660008 (+) // 93.33 // q25.2"]
["11731050_at",0.07729912,0.03187704,-0.19251108,-0.2074604,-0.03187704,0.09642744,0.9572748,0.8778971,1.01386,0.019858431,1.01386,"up","KIAA1377",57562,"","","0005515 // protein binding // inferred from physical interaction","chr11:101785745-101871793 (+) // 77.92 // q22.1"]
["11728743_a_at",-0.025913715,-0.008916378,0.16533613,-0.14032984,0.008916378,0.18497944,0.9384796,0.8303065,1.0179359,0.025646677,1.0179359,"up","ARAP3",64411,"0007010 // cytoskeleton organization // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from sequence or structural similarity /// 0016192 // vesicle-mediated transport // traceable author statement /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from sequence or structural similarity /// 0032312 // regulation of ARF GTPase activity // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from sequence or structural similarity /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0035021 // negative regulation of Rac protein signal transduction // inferred from electronic annotation /// 0035024 // negative regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035024 // negative regulation of Rho protein signal transduction // inferred from sequence or structural similarity /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0001726 // ruffle // inferred from sequence or structural similarity /// 0001726 // ruffle // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred by curator /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from sequence or structural similarity /// 0030027 // lamellipodium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // inferred from sequence or structural similarity /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0005547 // phosphatidylinositol-3,4,5-trisphosphate binding // inferred from direct assay /// 0008060 // ARF GTPase activator activity // inferred from sequence or structural similarity /// 0008060 // ARF GTPase activator activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0030675 // Rac GTPase activator activity // inferred from sequence or structural similarity /// 0043325 // phosphatidylinositol-3,4-bisphosphate binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:141032844-141060409 (-) // 91.61 // q31.3"]
["11731477_at",-0.09825802,-0.24144077,-0.21611595,0.24631691,0.11357212,0.09825802,0.09364461,0.0063285506,-1.263992,-0.33798727,1.263992,"down","CHMP1B",57132,"0006810 // transport // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction","chr18:11850937-11854448 (+) // 91.22 // p11.21"]
["11721568_a_at",0.14153385,0.088440895,0.015372276,-0.13055706,-0.015372276,-0.121165276,0.19957785,0.030313473,1.1256933,0.17081384,1.1256933,"up","C9orf3 /// LOC100507319","100507319 /// 84909","0006508 // proteolysis // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0019370 // leukotriene biosynthetic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0004177 // aminopeptidase activity // inferred from direct assay /// 0004177 // aminopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from direct assay /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:97488714-97849500 (+) // 80.89 // q22.32"]
["11749336_a_at",0.00784874,0.08420658,0.031784058,-0.08395958,-0.07577133,-0.00784874,0.23614064,0.042308718,1.0696507,0.09713969,1.0696507,"up","MRPL47",57129,"0006412 // translation // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005761 // mitochondrial ribosome // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from electronic annotation","chr3:179306256-179322416 (-) // 95.24 // q26.33"]
["11763741_x_at",0.028410912,0.021000862,-0.03398609,0.060286522,-0.021000862,-0.03085041,0.98300254,0.95003796,1.0016165,0.002330202,1.0016165,"up","ACTR6",64431,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","","chr12:100593642-100635625 (+) // 83.16 // q23.1"]
["11764061_s_at",-0.29193592,-0.0051136017,0.0051145554,-0.010808945,0.041312218,0.123615265,0.54673785,0.22943176,-1.1085582,-0.14868449,1.1085582,"down","NDUFB3",4709,"0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0006120 // mitochondrial electron transport, NADH to ubiquinone // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation","0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement /// 0008137 // NADH dehydrogenase (ubiquinone) activity // inferred from electronic annotation /// 0008137 // NADH dehydrogenase (ubiquinone) activity // traceable author statement","chr2:201950201-201950502 (+) // 68.8 // q33.1"]
["11763866_at",0.01398778,-0.20506239,-0.000954628,0.0065248013,-0.028544426,0.0009543896,0.75133365,0.47001135,-1.0402917,-0.05698807,1.0402917,"down","","","","","","chr14:36010306-36011764 (+) // 69.2 // q13.2"]
["11761020_at",0.04316759,-0.18516111,-0.017385006,0.017385006,-0.17081404,0.03054905,0.9653581,0.9035794,-1.0084686,-0.012166204,1.0084686,"down","RTCA",8634,"0006396 // RNA processing // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003963 // RNA-3'-phosphate cyclase activity // inferred from electronic annotation /// 0003963 // RNA-3'-phosphate cyclase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation","chr1:100731713-100739511 (+) // 99.83 // p21.2"]
["11761587_x_at",-0.06976557,-0.008379459,-0.07219362,0.0683341,0.058613777,0.008379936,0.18923238,0.027096683,-1.0682299,-0.09522219,1.0682299,"down","PIGQ",9091,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006501 // C-terminal protein lipidation // traceable author statement /// 0006506 // GPI anchor biosynthetic process // inferred from electronic annotation /// 0016254 // preassembly of GPI anchor in ER membrane // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0000506 // glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0017176 // phosphatidylinositol N-acetylglucosaminyltransferase activity // inferred from electronic annotation","chr16:622505-633095 (+) // 99.42 // p13.3"]
["11758365_s_at",-0.013288498,-0.076471806,-0.07984972,0.19492626,0.013288498,0.20677614,0.23621286,0.042331334,-1.1446186,-0.19486699,1.1446186,"down",-0.07984972,"TTLL8",164714,"0006464 // cellular protein modification process // inferred from electronic annotation /// 0018094 // protein polyglycylation // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005929 // cilium // inferred from sequence or structural similarity /// 0005929 // cilium // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from sequence or structural similarity /// 0035085 // cilium axoneme // inferred from sequence or structural similarity /// 0035085 // cilium axoneme // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0004835 // tubulin-tyrosine ligase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0070735 // protein-glycine ligase activity // inferred from sequence or structural similarity /// 0070736 // protein-glycine ligase activity, initiating // inferred from sequence or structural similarity"]
["11726074_a_at",-0.01642847,-0.039431572,-0.14410543,0.105121136,0.01642847,0.09981203,0.2426261,0.044755153,-1.1022431,-0.1404424,1.1022431,"down","ARHGEF7",8874,"0006915 // apoptotic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043547 // positive regulation of GTPase activity // inferred from direct assay /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0001726 // ruffle // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005925 // focal adhesion // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from direct assay /// 0043025 // neuronal cell body // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay","0005085 // guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction","chr13:111767623-111947542 (+) // 96.56 // q34"]
["11731738_a_at",-0.25134087,0.016972065,0.008326054,-0.05165577,0.030515194,-0.008326054,0.77943915,0.5120834,-1.046466,-0.06552543,1.046466,"down","PGAP1",80055,"0006501 // C-terminal protein lipidation // traceable author statement /// 0006505 // GPI anchor metabolic process // inferred from electronic annotation /// 0006506 // GPI anchor biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0009880 // embryonic pattern specification // inferred from electronic annotation /// 0009948 // anterior/posterior axis specification // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0015798 // myo-inositol transport // inferred from sequence or structural similarity /// 0015798 // myo-inositol transport // inferred from electronic annotation /// 0016255 // attachment of GPI anchor to protein // traceable author statement /// 0021871 // forebrain regionalization // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0060322 // head development // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from sequence or structural similarity /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031227 // intrinsic to endoplasmic reticulum membrane // inferred from electronic annotation","0004518 // nuclease activity // inferred from sequence or structural similarity /// 0004518 // nuclease activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation /// 0042578 // phosphoric ester hydrolase activity // inferred from sequence or structural similarity /// 0042578 // phosphoric ester hydrolase activity // inferred from electronic annotation","chr2:197697727-197791454 (-) // 90.79 // q33.1"]
["11717444_at",0.039326668,0.022047997,-0.022047997,0.062129974,-0.059726715,-0.099020004,0.7246079,0.4313907,1.031908,0.0453144,1.031908,"up","BYSL",705,"0007155 // cell adhesion // traceable author statement /// 0007565 // female pregnancy // traceable author statement /// 0042254 // ribosome biogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr6:41888925-41901089 (+) // 90.77 // p21.1"]
["11757271_s_at",-0.036379337,-0.24396706,-0.1149869,0.10143852,0.036379814,0.12894297,0.1963627,0.029334579,-1.1652974,-0.22069818,1.1652974,"down","SNX6",58533,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from mutant phenotype /// 0006886 // intracellular protein transport // non-traceable author statement /// 0007154 // cell communication // inferred from electronic annotation /// 0007175 // negative regulation of epidermal growth factor-activated receptor activity // non-traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0042147 // retrograde transport, endosome to Golgi // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0005622 // intracellular // inferred from mutant phenotype /// 0005622 // intracellular // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from direct assay /// 0031901 // early endosome membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction","chr14:35010055-35011226 (+) // 73.56 // q13.1 /// chr14:35030300-35031471 (-) // 73.56 // q13.1"]
["11718660_a_at",0.1574192,0.012011528,-0.012011528,0.07297897,-0.054224014,-0.15430355,0.6300697,0.31173846,1.0700334,0.09765587,1.0700334,"up","NENF",29937,"0043410 // positive regulation of MAPK cascade // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0008083 // growth factor activity // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:212606228-212619721 (+) // 78.79 // q32.3"]
["11743311_a_at",0.33329296,-0.0750494,-0.10294771,0.35154438,0.03369522,-0.033694744,0.90073353,0.7406375,-1.0463868,-0.0654163,1.0463868,"down","PILRB",29990,"0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0007171 // activation of transmembrane receptor protein tyrosine kinase activity // non-traceable author statement","0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr7:99933709-99965444 (+) // 80.35 // q22.1"]
["11762887_a_at",-0.07060051,-0.030082226,0.030081749,-0.4124527,0.070305824,0.10129166,0.9070941,0.7537198,1.0401211,0.05675148,1.0401211,"up","DIO3OS /// MIR1247","100302145 /// 64150","","","","chr14:102023638-102026683 (-) // 95.74 // q32.31"]
["11724562_x_at",0.34918594,0.055153847,-0.055153847,0.20064831,-0.22573471,-0.29944992,0.6360643,0.3181931,1.1684322,0.22457406,1.1684322,"up","RHOF",54509,"0006184 // GTP catabolic process // non-traceable author statement /// 0007015 // actin filament organization // inferred from direct assay /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // non-traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // non-traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation","chr12:122215659-122231600 (-) // 78.47 // q24.31"]
["11754288_a_at",0.29785156,0.3025751,0.2861805,-0.3630514,-0.29930878,-0.2861805,0.011630853,1.4627974e-5,1.5280756,0.6117159,1.5280756,"up","LMAN2L",81562,"0006457 // protein folding // non-traceable author statement /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0015031 // protein transport // inferred from mutant phenotype","0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030134 // ER to Golgi transport vesicle // non-traceable author statement","0005537 // mannose binding // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:97371665-97405809 (-) // 95.48 // q11.2"]
["11725434_a_at",-0.076480865,0.26205826,-0.0028777122,0.068012714,0.0028772354,-0.0040488243,0.8964173,0.7324507,1.0271305,0.03861947,1.0271305,"up","RUNDC3A",10900,"0007264 // small GTPase mediated signal transduction // traceable author statement","","0005083 // small GTPase regulator activity // traceable author statement","chr17:42384755-42396023 (+) // 84.41 // q21.31"]
["11734233_at",-0.024441242,-0.019101143,0.019101143,0.28070116,-0.18358994,0.23166704,0.7516726,0.47058862,-1.0850337,-0.11773979,1.0850337,"down","C14orf176",643382,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr14:21567095-21571882 (+) // 92.68 // q11.2"]
["11749251_a_at",-0.069120884,0.054292202,-0.05429268,-0.06084156,0.06428099,0.07089758,0.7417056,0.45511052,-1.0337014,-0.04781953,1.0337014,"down","REXO4",57109,"0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr9:136271757-136283130 (-) // 99.6 // q34.2"]
["11759531_x_at",0.00936079,0.027801514,-0.00936079,-0.24958849,0.009796143,-0.07912207,0.5200725,0.20707089,1.0834045,0.11557204,1.0834045,"up","NUDT22",84304,"","","0016787 // hydrolase activity // inferred from electronic annotation","chr11:63997013-64001752 (+) // 98.79 // q13.1"]
["11749156_x_at",0.035728455,0.069802284,-0.024469376,0.024469376,-0.09280586,-0.08326626,0.47410244,0.1715429,1.055228,0.07755474,1.055228,"up","ORC3",23595,"0000075 // cell cycle checkpoint // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation","0000808 // origin recognition complex // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005664 // nuclear origin of replication recognition complex // inferred from direct assay /// 0005664 // nuclear origin of replication recognition complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003688 // DNA replication origin binding // traceable author statement","chr6:88299853-88376885 (+) // 97.86 // q15"]
["11745516_a_at",0.2267623,0.09958696,-0.0036497116,0.0036492348,-0.121735096,-0.07513332,0.3383159,0.08646715,1.1265981,0.17197296,1.1265981,"up","STX16",8675,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006891 // intra-Golgi vesicle-mediated transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0042147 // retrograde transport, endosome to Golgi // inferred from direct assay","0000139 // Golgi membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005792 // microsome // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031201 // SNARE complex // traceable author statement","0005484 // SNAP receptor activity // inferred from direct assay /// 0005484 // SNAP receptor activity // inferred from electronic annotation /// 0005484 // SNAP receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr20:57226308-57251581 (+) // 95.58 // q13.32"]
["11749173_a_at",0.0845356,0.0008096695,-0.04938507,0.09584141,-0.058242798,-0.0008096695,0.9983909,0.99652123,-1.0001915,-0.00027617769,1.0001915,"down","PPP2R5D",5528,"0007165 // signal transduction // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement","0000159 // protein phosphatase type 2A complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008601 // protein phosphatase type 2A regulator activity // inferred from electronic annotation /// 0008601 // protein phosphatase type 2A regulator activity // traceable author statement","chr6:42952281-42979142 (+) // 94.35 // p21.1"]
["11743670_s_at",0.06526184,-0.1393547,-0.004377365,0.27525902,0.004377365,-0.036566257,0.70478654,0.4033528,-1.0771209,-0.10718019,1.0771209,"down","ZNF292",23036,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:87865266-87973914 (+) // 98.71 // q14.3"]
["11739617_x_at",-0.1623087,-0.13619518,-0.076485634,0.0806818,0.11882877,0.076485634,0.051126584,0.0016509467,-1.1623102,-0.2169952,1.1623102,"down","CD44",960,"0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // non-traceable author statement /// 0016337 // cell-cell adhesion // non-traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0030214 // hyaluronan catabolic process // inferred from direct assay /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0034116 // positive regulation of heterotypic cell-cell adhesion // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0043518 // negative regulation of DNA damage response, signal transduction by p53 class mediator // inferred from direct assay /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from direct assay /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0051216 // cartilage development // inferred from expression pattern /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0070487 // monocyte aggregation // inferred from mutant phenotype /// 1900625 // positive regulation of monocyte aggregation // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004415 // hyalurononglucosaminidase activity // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // non-traceable author statement /// 0005540 // hyaluronic acid binding // inferred from direct assay /// 0005540 // hyaluronic acid binding // inferred from electronic annotation /// 0005540 // hyaluronic acid binding // non-traceable author statement","chr11:35160416-35253948 (+) // 97.54 // p13"]
["11723796_a_at",0.16265965,0.3022132,0.15775633,-0.20179224,-0.2226386,-0.1577568,0.047654077,0.0014133662,1.3209772,0.40160558,1.3209772,"up","SFMBT1",51460,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","","chr3:52938170-53079301 (-) // 97.73 // p21.1"]
["11716309_a_at",0.36838675,0.2265625,0.22521782,-0.22521782,-0.27927446,-0.2533002,0.030541899,0.00046172968,1.4399178,0.52598643,1.4399178,"up","CYBRD1",79901,"0006879 // cellular iron ion homeostasis // traceable author statement /// 0010039 // response to iron ion // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031526 // brush border membrane // inferred from electronic annotation","0000293 // ferric-chelate reductase activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016722 // oxidoreductase activity, oxidizing metal ions // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:172378742-172414639 (+) // 89.4 // q31.1"]
["11742561_at",0.0023460388,0.33628178,-0.0023460388,-0.25477076,-0.12827444,0.014285564,0.45860127,0.16000676,1.176918,0.23501384,1.176918,"up","OR2G2",81470,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr1:247751661-247752615 (+) // 93.5 // q44"]
["11746718_at",-0.22655153,-0.019931793,0.1082468,-0.010052681,0.03220272,0.010052681,0.8275078,0.5942292,-1.0401655,-0.05681315,1.0401655,"down","KDM4C",23081,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0016568 // chromatin modification // inferred from electronic annotation /// 0033169 // histone H3-K9 demethylation // inferred from direct assay /// 0033169 // histone H3-K9 demethylation // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from electronic annotation /// 0032454 // histone demethylase activity (H3-K9 specific) // inferred from direct assay /// 0032454 // histone demethylase activity (H3-K9 specific) // inferred from mutant phenotype /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050681 // androgen receptor binding // inferred from physical interaction /// 0050681 // androgen receptor binding // inferred from electronic annotation","chr9:6720862-7077263 (+) // 96.93 // p24.1"]
["11750779_a_at",-0.007089615,0.20837784,-0.21050644,0.0036640167,0.017451286,-0.0036640167,0.9808318,0.94500333,-1.006181,-0.008889855,1.006181,"down","SLC2A5",6518,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0015755 // fructose transport // traceable author statement /// 0015755 // fructose transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0015758 // glucose transport // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0005353 // fructose transmembrane transporter activity // inferred from electronic annotation /// 0005353 // fructose transmembrane transporter activity // traceable author statement /// 0005355 // glucose transmembrane transporter activity // inferred from electronic annotation /// 0005355 // glucose transmembrane transporter activity // traceable author statement /// 0022857 // transmembrane transporter activity // inferred from electronic annotation /// 0022891 // substrate-specific transmembrane transporter activity // inferred from electronic annotation","chr1:9097171-9145204 (-) // 94.34 // p36.23"]
["11727209_a_at",0.02750206,-0.08948898,-0.107601166,0.095378876,0.05385399,-0.02750206,0.45332322,0.15583722,-1.0696259,-0.09710624,1.0696259,"down","GLRX2",51022,"0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006467 // protein thiol-disulfide exchange // traceable author statement /// 0006749 // glutathione metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // non-traceable author statement /// 0009266 // response to temperature stimulus // non-traceable author statement /// 0009966 // regulation of signal transduction // non-traceable author statement /// 0010033 // response to organic substance // inferred from direct assay /// 0022900 // electron transport chain // inferred from electronic annotation /// 0030154 // cell differentiation // non-traceable author statement /// 0042262 // DNA protection // non-traceable author statement /// 0042542 // response to hydrogen peroxide // inferred from direct assay /// 0045454 // cell redox homeostasis // traceable author statement /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 0051775 // response to redox state // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0008794 // arsenate reductase (glutaredoxin) activity // traceable author statement /// 0009055 // electron carrier activity // non-traceable author statement /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0015035 // protein disulfide oxidoreductase activity // inferred from electronic annotation /// 0015038 // glutathione disulfide oxidoreductase activity // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation","chr1:193065600-193075244 (-) // 95.82 // q31.2"]
["11733228_at",0,-0.048626423,0.3132329,-0.3308425,0,0.15239143,0.74677455,0.46310756,1.1077911,0.14768581,1.1077911,"up","DNMT3L",29947,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0006306 // DNA methylation // non-traceable author statement /// 0006349 // regulation of gene expression by genetic imprinting // non-traceable author statement /// 0007283 // spermatogenesis // non-traceable author statement /// 0043085 // positive regulation of catalytic activity // inferred from direct assay /// 0043085 // positive regulation of catalytic activity // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0000794 // condensed nuclear chromosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005720 // nuclear heterochromatin // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008047 // enzyme activator activity // inferred from direct assay /// 0008047 // enzyme activator activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr21:45666222-45682099 (-) // 90.49 // q22.3"]
["11718654_s_at",0.28727627,0.102841854,0.14126682,-0.10284138,-0.26904774,-0.28686476,0.10555048,0.008119878,1.316505,0.39671296,1.316505,"up","PKD2",5311,"0001658 // branching involved in ureteric bud morphogenesis // inferred from expression pattern /// 0001822 // kidney development // inferred from electronic annotation /// 0001889 // liver development // inferred from expression pattern /// 0001892 // embryonic placenta development // inferred from sequence or structural similarity /// 0001892 // embryonic placenta development // inferred from electronic annotation /// 0003127 // detection of nodal flow // inferred from sequence or structural similarity /// 0003127 // detection of nodal flow // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from sequence or structural similarity /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from sequence or structural similarity /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0007259 // JAK-STAT cascade // inferred from sequence or structural similarity /// 0007259 // JAK-STAT cascade // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from sequence or structural similarity /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0007507 // heart development // inferred from expression pattern /// 0007507 // heart development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // non-traceable author statement /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0021510 // spinal cord development // inferred from expression pattern /// 0021915 // neural tube development // inferred from expression pattern /// 0030814 // regulation of cAMP metabolic process // inferred from sequence or structural similarity /// 0030814 // regulation of cAMP metabolic process // inferred from electronic annotation /// 0031587 // positive regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity // inferred from mutant phenotype /// 0031659 // positive regulation of cyclin-dependent protein kinase activity involved in G1/S // inferred from direct assay /// 0034614 // cellular response to reactive oxygen species // non-traceable author statement /// 0035502 // metanephric ureteric bud development // inferred from expression pattern /// 0035725 // sodium ion transmembrane transport // inferred from direct assay /// 0035904 // aorta development // inferred from expression pattern /// 0042127 // regulation of cell proliferation // inferred from mutant phenotype /// 0042994 // cytoplasmic sequestering of transcription factor // inferred from mutant phenotype /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from mutant phenotype /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0050982 // detection of mechanical stimulus // inferred from sequence or structural similarity /// 0050982 // detection of mechanical stimulus // inferred from electronic annotation /// 0051209 // release of sequestered calcium ion into cytosol // inferred from direct assay /// 0051209 // release of sequestered calcium ion into cytosol // inferred from mutant phenotype /// 0051209 // release of sequestered calcium ion into cytosol // inferred from electronic annotation /// 0051298 // centrosome duplication // non-traceable author statement /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from direct assay /// 0060315 // negative regulation of ryanodine-sensitive calcium-release channel activity // inferred from sequence or structural similarity /// 0060315 // negative regulation of ryanodine-sensitive calcium-release channel activity // inferred from electronic annotation /// 0060674 // placenta blood vessel development // inferred from sequence or structural similarity /// 0060674 // placenta blood vessel development // inferred from electronic annotation /// 0061333 // renal tubule morphogenesis // inferred from sequence or structural similarity /// 0061333 // renal tubule morphogenesis // inferred from electronic annotation /// 0061371 // determination of heart left/right asymmetry // inferred from mutant phenotype /// 0061441 // renal artery morphogenesis // inferred from expression pattern /// 0070588 // calcium ion transmembrane transport // inferred from direct assay /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation /// 0071158 // positive regulation of cell cycle arrest // inferred from mutant phenotype /// 0071464 // cellular response to hydrostatic pressure // inferred from direct assay /// 0071470 // cellular response to osmotic stress // inferred from direct assay /// 0071498 // cellular response to fluid shear stress // inferred from mutant phenotype /// 0071498 // cellular response to fluid shear stress // inferred from electronic annotation /// 0071805 // potassium ion transmembrane transport // inferred from sequence or structural similarity /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation /// 0072075 // metanephric mesenchyme development // inferred from expression pattern /// 0072164 // mesonephric tubule development // inferred from expression pattern /// 0072177 // mesonephric duct development // inferred from expression pattern /// 0072208 // metanephric smooth muscle tissue development // inferred from expression pattern /// 0072214 // metanephric cortex development // inferred from expression pattern /// 0072218 // metanephric ascending thin limb development // inferred from expression pattern /// 0072219 // metanephric cortical collecting duct development // inferred from expression pattern /// 0072235 // metanephric distal tubule development // inferred from expression pattern /// 0072284 // metanephric S-shaped body morphogenesis // inferred from expression pattern /// 0090279 // regulation of calcium ion import // inferred from direct assay /// 2000134 // negative regulation of G1/S transition of mitotic cell cycle // inferred from mutant phenotype","0002133 // polycystin complex // inferred from sequence or structural similarity /// 0002133 // polycystin complex // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from mutant phenotype /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from mutant phenotype /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0005911 // cell-cell junction // inferred from sequence or structural similarity /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005929 // cilium // inferred from sequence or structural similarity /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from direct assay /// 0009925 // basal plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from direct assay /// 0031512 // motile primary cilium // inferred from sequence or structural similarity /// 0031512 // motile primary cilium // inferred from electronic annotation /// 0031513 // nonmotile primary cilium // inferred from sequence or structural similarity /// 0031513 // nonmotile primary cilium // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0044441 // cilium part // inferred from electronic annotation /// 0045180 // basal cortex // inferred from direct assay /// 0045180 // basal cortex // inferred from electronic annotation /// 0071458 // integral to cytosolic side of endoplasmic reticulum membrane // inferred from direct assay /// 0071556 // integral to lumenal side of endoplasmic reticulum membrane // inferred from direct assay /// 0072686 // mitotic spindle // inferred from direct assay /// 0072686 // mitotic spindle // inferred from electronic annotation","0005102 // receptor binding // inferred from physical interaction /// 0005102 // receptor binding // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from direct assay /// 0005245 // voltage-gated calcium channel activity // inferred from direct assay /// 0005248 // voltage-gated sodium channel activity // inferred from direct assay /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0005267 // potassium channel activity // inferred from sequence or structural similarity /// 0005267 // potassium channel activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from direct assay /// 0015267 // channel activity // inferred from electronic annotation /// 0022843 // voltage-gated cation channel activity // inferred from direct assay /// 0042802 // identical protein binding // inferred from sequence or structural similarity /// 0042802 // identical protein binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0042805 // actinin binding // inferred from direct assay /// 0043398 // HLH domain binding // inferred from physical interaction /// 0044325 // ion channel binding // inferred from physical interaction /// 0048763 // calcium-induced calcium release activity // inferred from direct assay /// 0051117 // ATPase binding // inferred from sequence or structural similarity /// 0051117 // ATPase binding // inferred from electronic annotation","chr4:88928798-88998929 (+) // 94.46 // q22.1"]
["11718584_a_at",-0.061620235,-0.18475151,-0.202528,0.20084524,0.06161976,0.107167244,0.119664736,0.010652209,-1.2081872,-0.27284402,1.2081872,"down","SAP30BP",29115,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr17:73663195-73704139 (+) // 86.96 // q25.1"]
["11726943_at",-0.20336843,0,0.1337781,0,-0.14772034,0.04471183,0.9742764,0.9268359,1.0077511,0.011139368,1.0077511,"up","ZKSCAN2",342357,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:25247323-25268880 (-) // 89.18 // p12.1"]
["11730034_at",-0.23902893,0,0,-0.099419594,0.1233418,0.09828234,0.6384111,0.32083672,-1.0870446,-0.12041113,1.0870446,"down","CDHR2",54825,"0007155 // cell adhesion // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr5:175969511-176022975 (+) // 98.47 // q35.2"]
["11735046_at",-0.03433323,0.023173809,0.037510395,-0.023173809,-0.023173809,0.023173809,0.8146369,0.5718293,1.0115083,0.016508223,1.0115083,"up","ATP6V0D2",245972,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0033572 // transferrin transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0016471 // vacuolar proton-transporting V-type ATPase complex // inferred from direct assay /// 0033177 // proton-transporting two-sector ATPase complex, proton-transporting domain // inferred from electronic annotation /// 0033179 // proton-transporting V-type ATPase, V0 domain // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation","chr8:87111065-87166457 (+) // 70.76 // q21.3"]
["11742522_at",-0.23205423,0.056747675,0.0035898685,-0.11130452,-0.0035898685,0.045429945,0.9056682,0.7505922,-1.0239066,-0.034084104,1.0239066,"down","OR5T3",390154,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:56019675-56020698 (+) // 100.0 // q12.1"]
["11738198_at",-0.25079513,-0.011214733,0.020340443,-0.26183438,0.011214733,0.07196021,0.95901597,0.8827481,-1.0146649,-0.02100333,1.0146649,"down","PDE6B",5158,"0007165 // signal transduction // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0007601 // visual perception // inferred from electronic annotation /// 0007601 // visual perception // traceable author statement /// 0007603 // phototransduction, visible light // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009583 // detection of light stimulus // inferred from electronic annotation /// 0046037 // GMP metabolic process // inferred from mutant phenotype /// 0050896 // response to stimulus // inferred from electronic annotation /// 0051480 // cytosolic calcium ion homeostasis // inferred from mutant phenotype /// 0060041 // retina development in camera-type eye // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004114 // 3',5'-cyclic-nucleotide phosphodiesterase activity // inferred from electronic annotation /// 0008081 // phosphoric diester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047555 // 3',5'-cyclic-GMP phosphodiesterase activity // inferred from mutant phenotype /// 0047555 // 3',5'-cyclic-GMP phosphodiesterase activity // inferred from electronic annotation","chr4:646965-664680 (+) // 88.51 // p16.3"]
["11737809_at",-0.119390965,0,0.005393505,-0.0049977303,0,0.104418755,0.5789812,0.25911596,-1.0505462,-0.07113957,1.0505462,"down","KCNH7",90134,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005242 // inward rectifier potassium channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005249 // voltage-gated potassium channel activity // inferred from electronic annotation /// 0005267 // potassium channel activity // inferred from electronic annotation","chr2:163227916-163695390 (-) // 97.44 // q24.2"]
["11749712_a_at",-0.16052628,-0.026047707,0.026047707,-0.30692768,0.13280821,0.13273191,0.93076575,0.81248623,-1.0279093,-0.03971294,1.0279093,"down","PDE1B",5153,"0001505 // regulation of neurotransmitter levels // inferred from electronic annotation /// 0001975 // response to amphetamine // inferred from electronic annotation /// 0006198 // cAMP catabolic process // inferred from direct assay /// 0006198 // cAMP catabolic process // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008542 // visual learning // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0030224 // monocyte differentiation // inferred from expression pattern /// 0036006 // cellular response to macrophage colony-stimulating factor stimulus // inferred from direct assay /// 0042053 // regulation of dopamine metabolic process // inferred from electronic annotation /// 0042428 // serotonin metabolic process // inferred from electronic annotation /// 0046069 // cGMP catabolic process // inferred from direct assay /// 0046069 // cGMP catabolic process // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0097011 // cellular response to granulocyte macrophage colony-stimulating factor stimulus // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0043025 // neuronal cell body // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004112 // cyclic-nucleotide phosphodiesterase activity // inferred from electronic annotation /// 0004114 // 3',5'-cyclic-nucleotide phosphodiesterase activity // inferred from electronic annotation /// 0004115 // 3',5'-cyclic-AMP phosphodiesterase activity // inferred from electronic annotation /// 0004117 // calmodulin-dependent cyclic-nucleotide phosphodiesterase activity // traceable author statement /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0008081 // phosphoric diester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048101 // calcium- and calmodulin-regulated 3',5'-cyclic-GMP phosphodiesterase activity // inferred from electronic annotation","chr12:54943384-54972044 (+) // 97.72 // q13.2"]
["11759500_at",0.36216927,0.0730772,0.10424805,-0.230793,-0.0730772,-0.19405842,0.19401263,0.028598469,1.2708623,0.34580776,1.2708623,"up","TNPO3",23534,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0035048 // splicing factor protein import into nucleus // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0004872 // receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr7:128594235-128695245 (-) // 95.83 // q32.1"]
["11760714_at",-0.08686042,-0.00031852722,-0.0068793297,0.014758587,0.00031852722,0.21786022,0.5391806,0.22251542,-1.0784793,-0.10899847,1.0784793,"down","","","","","","chr9:32463819-32464974 (+) // 64.12 // p21.1"]
["11762213_x_at",-0.056843996,0.039443493,0.24050331,-0.055318832,-0.039443493,0.08043671,0.74629,0.46255535,1.0563902,0.07914278,1.0563902,"up","","","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:20959109-20977395 (+) // 59.39 // p12"]
["11762572_x_at",0.15340066,-0.0014595985,-0.016169071,-0.29655743,0.0014595985,0.024993896,0.62967455,0.31131253,1.0983151,0.13529204,1.0983151,"up","MTHFD2L",441024,"0000105 // histidine biosynthetic process // inferred from electronic annotation /// 0006164 // purine nucleotide biosynthetic process // inferred from electronic annotation /// 0006730 // one-carbon metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009086 // methionine biosynthetic process // inferred from electronic annotation /// 0009396 // folic acid-containing compound biosynthetic process // inferred from electronic annotation /// 0035999 // tetrahydrofolate interconversion // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004477 // methenyltetrahydrofolate cyclohydrolase activity // inferred from electronic annotation /// 0004487 // methylenetetrahydrofolate dehydrogenase (NAD+) activity // inferred from electronic annotation /// 0004488 // methylenetetrahydrofolate dehydrogenase (NADP+) activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr4:75023824-75049177 (+) // 44.21 // q13.3"]
["11730477_at",-0.30170512,0.09309006,-0.21827793,-0.029706001,0.029705763,0.030446768,0.59869313,0.2788231,-1.1114527,-0.15244655,1.1114527,"down","RNF125",54941,"0016567 // protein ubiquitination // inferred from electronic annotation /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0045087 // innate immune response // traceable author statement","0005622 // intracellular // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr18:29598334-29653159 (+) // 70.09 // q12.1"]
["11753298_x_at",0.073150635,0.014250755,0.021115303,-0.31598663,-0.115484715,-0.014251232,0.38352898,0.11102291,1.1366172,0.18474643,1.1366172,"up","BIRC7",79444,"0006309 // apoptotic DNA fragmentation // non-traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from mutant phenotype /// 0006916 // anti-apoptosis // non-traceable author statement /// 0007257 // activation of JUN kinase activity // non-traceable author statement /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0042127 // regulation of cell proliferation // inferred from direct assay /// 0070247 // regulation of natural killer cell apoptotic process // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004869 // cysteine-type endopeptidase inhibitor activity // traceable author statement /// 0004869 // cysteine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019899 // enzyme binding // non-traceable author statement /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:61867448-61870957 (+) // 99.8 // q13.33"]
["11749396_s_at",-0.09253025,0.09218025,0.024271965,-0.14255428,-0.024271965,0.117767334,0.9278626,0.80572546,1.0170051,0.024326894,1.0170051,"up","DEXI /// LOC100289656","100289656 /// 28955","","","","chr15:29033388-29034538 (+) // 100.0 // q13.1 /// chr15:23157963-23159115 (-) // 98.77 // q11.2"]
["11759015_at",0.018910885,-0.078816414,-0.11816025,0.23986912,0.13334513,-0.018910885,0.3756266,0.106371365,-1.1308882,-0.17745633,1.1308882,"down","SPECC1",92521,"","0005634 // nucleus // inferred from electronic annotation","","chr17:20059301-20142743 (+) // 83.91 // p11.2"]
["11759693_at",-0.016205788,0.016205788,0.27017212,-0.25436878,0.11820412,-0.26450443,0.53944874,0.22279905,1.1676548,0.22361377,1.1676548,"up","RTKN2",219790,"0007165 // signal transduction // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation","chr10:63997910-64028622 (-) // 93.69 // q21.2"]
["11733500_a_at",0.3579316,0.099248886,0.26476526,-0.09924936,-0.181077,-0.11031675,0.11453994,0.009708541,1.2931261,0.37086296,1.2931261,"up","ZBTB25",7597,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0010467 // gene expression // inferred from expression pattern","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:64952744-64970563 (-) // 88.6 // q23.3"]
["11742310_at",-0.033447266,0.033447266,-0.040049076,-0.26714754,0.15195799,0.21534538,0.9150525,0.7755164,-1.0329247,-0.04673502,1.0329247,"down","OR1I1",126370,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr19:15197790-15199032 (+) // 84.54 // p13.12"]
["11721500_at",0.036301613,-0.036301613,-0.037249565,0.43043327,0.094497204,-0.49518442,0.97852194,0.93842447,-1.0155997,-0.022331912,1.0155997,"down","SWAP70",23075,"0016444 // somatic cell DNA recombination // inferred from electronic annotation /// 0045190 // isotype switching // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation","chr11:9685623-9774501 (+) // 91.53 // p15.4"]
["11754731_a_at",0.23663712,0.0029935837,-0.0029935837,0.027213097,-0.2658968,-0.23896217,0.40473682,0.12356512,1.1794337,0.23809433,1.1794337,"up","MTA3",57504,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:42929417-42936352 (+) // 72.71 // p21"]
["11740357_a_at",0.24303961,0.18338418,-0.21540523,-0.076631546,-0.10296655,0.076631546,0.7929446,0.53508765,1.0752423,0.10466177,1.0752423,"up","MLPH",79083,"0006605 // protein targeting // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0030318 // melanocyte differentiation // inferred from electronic annotation /// 0032400 // melanosome localization // inferred from electronic annotation /// 0043473 // pigmentation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0017022 // myosin binding // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0031489 // myosin V binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051010 // microtubule plus-end binding // inferred from electronic annotation","chr2:238395877-238463960 (+) // 88.92 // q37.3"]
["11738278_x_at",0.10687852,0.17553616,0.17936611,-0.10687876,-0.1766808,-0.1938231,0.039267883,0.00091437035,1.2423352,0.31305447,1.2423352,"up","TRIM34 /// TRIM6-TRIM34","445372 /// 53840","0070206 // protein trimerization // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:5653339-5662524 (+) // 98.48 // p15.4"]
["11731191_at",0.1504147,-0.057580948,-0.06504774,-0.012234211,0.012234211,0.057693005,0.9638678,0.8986928,-1.0069339,-0.00996902,1.0069339,"down","KIAA2022",340533,"0000084 // S phase of mitotic cell cycle // not recorded /// 0006287 // base-excision repair, gap-filling // not recorded /// 0006297 // nucleotide-excision repair, DNA gap filling // not recorded /// 0007346 // regulation of mitotic cell cycle // not recorded /// 0019985 // translesion synthesis // not recorded /// 0043137 // DNA replication, removal of RNA primer // not recorded /// 0045004 // DNA replication proofreading // not recorded","0005634 // nucleus // not recorded /// 0043625 // delta DNA polymerase complex // not recorded","0003887 // DNA-directed DNA polymerase activity // not recorded /// 0008408 // 3'-5' exonuclease activity // not recorded","chrX:73952683-74145287 (-) // 93.04 // q13.3"]
["11763777_at",0.04539919,0.053263187,-0.058726788,-0.1081872,-0.04539919,0.10272312,0.8799555,0.69657326,1.0212005,0.030266203,1.0212005,"up","C1orf38",9473,"0006954 // inflammatory response // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement","","","chr1:28210660-28212420 (+) // 64.54 // p35.3"]
["11719261_s_at",0.6132612,-0.072626114,-0.12655449,0.4583645,-0.033949852,0.033949852,0.9867506,0.96098566,-1.0102843,-0.01476134,1.0102843,"down","LMNA",4000,"0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0006997 // nucleus organization // inferred from electronic annotation /// 0006998 // nuclear envelope organization // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007517 // muscle organ development // inferred from mutant phenotype /// 0030334 // regulation of cell migration // inferred from sequence or structural similarity /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0030951 // establishment or maintenance of microtubule cytoskeleton polarity // inferred from sequence or structural similarity /// 0030951 // establishment or maintenance of microtubule cytoskeleton polarity // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0034504 // protein localization to nucleus // inferred from sequence or structural similarity /// 0034504 // protein localization to nucleus // inferred from electronic annotation /// 0035105 // sterol regulatory element binding protein import into nucleus // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from sequence or structural similarity /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0055015 // ventricular cardiac muscle cell development // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from expression pattern /// 0090343 // positive regulation of cell aging // inferred from direct assay","0005626 // insoluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // traceable author statement /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005638 // lamin filament // inferred from electronic annotation /// 0005638 // lamin filament // traceable author statement /// 0005652 // nuclear lamina // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005882 // intermediate filament // inferred from electronic annotation /// 0005882 // intermediate filament // traceable author statement /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005198 // structural molecule activity // inferred from electronic annotation /// 0005198 // structural molecule activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr1:156052368-156109878 (+) // 78.66 // q22"]
["11758910_at",-0.2332077,0.07184601,0.15809155,-0.31343699,-0.07184601,0.327106,0.97852194,0.9380574,1.012767,0.018302241,1.012767,"up","RTKN",6242,"0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from direct assay /// 0007165 // signal transduction // inferred from electronic annotation /// 0007266 // Rho protein signal transduction // inferred from direct assay /// 0045767 // regulation of anti-apoptosis // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005095 // GTPase inhibitor activity // inferred from direct assay /// 0005095 // GTPase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0017048 // Rho GTPase binding // inferred from electronic annotation /// 0017049 // GTP-Rho binding // inferred from direct assay /// 0017049 // GTP-Rho binding // inferred from electronic annotation","chr2:74653009-74669546 (-) // 98.04 // p13.1"]
["11750150_s_at",-0.08583212,-0.03701973,0.41306353,-0.04936266,0.03701973,0.12617397,0.90162474,0.74209034,1.0415944,0.05879358,1.0415944,"up","ZNF815P /// ZNF890P","401303 /// 645700","0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation","chr7:5862790-5887498 (+) // 90.78 // p22.1"]
["11760467_at",-0.19438744,0.011965752,0.05854988,-0.45682192,-0.011965752,0.30281544,0.9847546,0.9549897,1.0097747,0.014033414,1.0097747,"up","LOC613206",613206,"","","","chr9:127020588-127027106 (-) // 78.5 // q33.3"]
["11728852_a_at",0.044013977,-0.013243198,0.16532063,-0.08812094,0.013243198,-0.04376459,0.4542856,0.15667857,1.0754282,0.10491127,1.0754282,"up","TUB",7275,"0006909 // phagocytosis // inferred from electronic annotation /// 0050766 // positive regulation of phagocytosis // inferred from direct assay /// 0050896 // response to stimulus // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","","chr11:8060179-8128759 (+) // 94.08 // p15.4"]
["11757826_a_at",0.05736971,0.06272745,-0.05736971,0.25596666,-0.16248083,-0.32124853,0.83667684,0.6125644,1.069421,0.09682998,1.069421,"up","DHX8",1659,"0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004004 // ATP-dependent RNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr17:41598768-41622167 (+) // 97.1 // q21.31"]
["11758335_s_at",0.20035458,0.17126274,0.16778278,-0.16778278,-0.2961588,-0.19016647,0.034048837,0.0006264919,1.3175302,0.39783597,1.3175302,"up","FDX1",2230,"0006091 // generation of precursor metabolites and energy // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0030325 // adrenal gland development // inferred from electronic annotation /// 0034698 // response to gonadotropin stimulus // inferred from electronic annotation /// 0044320 // cellular response to leptin stimulus // inferred from electronic annotation /// 0044321 // response to leptin stimulus // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051353 // positive regulation of oxidoreductase activity // inferred from electronic annotation /// 0070995 // NADPH oxidation // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0071872 // cellular response to epinephrine stimulus // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0030061 // mitochondrial crista // inferred from electronic annotation","0005506 // iron ion binding // inferred from electronic annotation /// 0005506 // iron ion binding // traceable author statement /// 0008386 // cholesterol monooxygenase (side-chain-cleaving) activity // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0009055 // electron carrier activity // traceable author statement /// 0015039 // NADPH-adrenodoxin reductase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation","chr11:110306581-110333510 (+) // 90.05 // q22.3"]
["11760377_a_at",-0.06886053,0.24085236,0.023550034,0.1046257,-0.023550034,-0.05100441,0.8425004,0.62255365,1.038972,0.0551568,1.038972,"up","EFCAB11",90141,"","","0005509 // calcium ion binding // inferred from electronic annotation","chr14:90389555-90421094 (-) // 99.85 // q32.11"]
["11719531_a_at",0.17201114,0.05605817,-0.071437836,-0.006864786,0.006864786,-0.011571646,0.752129,0.47109547,1.0396283,0.056067765,1.0396283,"up","MMP19",4327,"0001525 // angiogenesis // inferred from electronic annotation /// 0001541 // ovarian follicle development // inferred from electronic annotation /// 0001542 // ovulation from ovarian follicle // inferred from electronic annotation /// 0001554 // luteolysis // inferred from electronic annotation /// 0006508 // proteolysis // non-traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030574 // collagen catabolic process // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:56229214-56236767 (-) // 88.48 // q13.2"]
["11715240_at",-0.24861574,-0.017833233,-0.011500359,0.07335901,0.23335981,0.011500359,0.4053467,0.12386482,-1.147682,-0.19872288,1.147682,"down","ZNF184",7738,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:27418521-27440897 (-) // 95.7 // p22.1"]
["11716451_s_at",0.06537914,0.21324062,0.08752823,-0.10678482,-0.06537914,-0.10703564,0.12121439,0.011038055,1.1607971,0.21511585,1.1607971,"up","RFTN1",23180,"","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay","","chr3:16357240-16555501 (-) // 98.17 // p25.1"]
["11723063_a_at",-0.040786743,-0.13857651,-0.24526787,0.1605854,0.17053223,0.040786743,0.1678428,0.021329068,-1.2020624,-0.26551175,1.2020624,"down","GCHFR",2644,"0006461 // protein complex assembly // inferred from electronic annotation /// 0006809 // nitric oxide biosynthetic process // traceable author statement /// 0009890 // negative regulation of biosynthetic process // inferred from electronic annotation /// 0042133 // neurotransmitter metabolic process // traceable author statement /// 0043105 // negative regulation of GTP cyclohydrolase I activity // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046209 // nitric oxide metabolic process // traceable author statement /// 0050999 // regulation of nitric-oxide synthase activity // traceable author statement /// 0051291 // protein heterooligomerization // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation","0004857 // enzyme inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0030742 // GTP-dependent protein binding // inferred from electronic annotation","chr15:41056217-41060088 (+) // 97.71 // q15.1"]
["11744453_s_at",-0.07951927,-0.088848114,-0.06908417,0.103796005,0.06908417,0.0959301,0.020655178,0.00014635717,-1.1240872,-0.16875397,1.1240872,"down","TMBIM4",51643,"0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from mutant phenotype /// 0050848 // regulation of calcium-mediated signaling // inferred from direct assay","0005794 // Golgi apparatus // inferred from electronic annotation /// 0005795 // Golgi stack // inferred from direct assay /// 0005795 // Golgi stack // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr12:66531613-66563766 (-) // 95.95 // q14.3"]
["11760844_a_at",-0.16824579,-0.12416935,0.014538765,0.06719494,0.26035976,-0.014538765,0.39200535,0.115796134,-1.1462836,-0.19696406,1.1462836,"down","RPN2",6185,"0006412 // translation // traceable author statement /// 0006464 // cellular protein modification process // traceable author statement /// 0006487 // protein N-linked glycosylation // inferred from electronic annotation /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // non-traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0008250 // oligosaccharyltransferase complex // inferred from electronic annotation /// 0008250 // oligosaccharyltransferase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004579 // dolichyl-diphosphooligosaccharide-protein glycotransferase activity // inferred from electronic annotation /// 0004579 // dolichyl-diphosphooligosaccharide-protein glycotransferase activity // non-traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation","chr20:35827038-35857423 (+) // 96.15 // q11.23"]
["11718531_a_at",0.42921162,0.07274151,-0.07274151,0.25120068,-0.20343304,-0.3191967,0.67633635,0.36584738,1.1757219,0.23354682,1.1757219,"up","CAD",790,"0006206 // pyrimidine base metabolic process // traceable author statement /// 0006207 // 'de novo' pyrimidine base biosynthetic process // inferred from sequence or structural similarity /// 0006207 // 'de novo' pyrimidine base biosynthetic process // inferred from electronic annotation /// 0006221 // pyrimidine nucleotide biosynthetic process // inferred from electronic annotation /// 0006520 // cellular amino acid metabolic process // inferred from electronic annotation /// 0006541 // glutamine metabolic process // inferred from sequence or structural similarity /// 0006543 // glutamine catabolic process // inferred from electronic annotation /// 0006807 // nitrogen compound metabolic process // inferred from electronic annotation /// 0007565 // female pregnancy // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0014075 // response to amine stimulus // inferred from electronic annotation /// 0017144 // drug metabolic process // inferred from sequence or structural similarity /// 0017144 // drug metabolic process // inferred from electronic annotation /// 0018107 // peptidyl-threonine phosphorylation // inferred from sequence or structural similarity /// 0031000 // response to caffeine // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0033574 // response to testosterone stimulus // inferred from electronic annotation /// 0044205 // 'de novo' UMP biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046134 // pyrimidine nucleoside biosynthetic process // traceable author statement /// 0046777 // protein autophosphorylation // inferred from sequence or structural similarity /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement /// 0070409 // carbamoyl phosphate biosynthetic process // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016363 // nuclear matrix // inferred from direct assay /// 0042995 // cell projection // inferred from sequence or structural similarity /// 0043025 // neuronal cell body // inferred from sequence or structural similarity /// 0043195 // terminal button // inferred from sequence or structural similarity /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004070 // aspartate carbamoyltransferase activity // inferred from sequence or structural similarity /// 0004070 // aspartate carbamoyltransferase activity // traceable author statement /// 0004070 // aspartate carbamoyltransferase activity // inferred from electronic annotation /// 0004088 // carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity // inferred from sequence or structural similarity /// 0004088 // carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity // traceable author statement /// 0004088 // carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity // inferred from electronic annotation /// 0004151 // dihydroorotase activity // inferred from sequence or structural similarity /// 0004151 // dihydroorotase activity // traceable author statement /// 0004151 // dihydroorotase activity // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016743 // carboxyl- or carbamoyltransferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016810 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds // inferred from electronic annotation /// 0016812 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from sequence or structural similarity /// 0042802 // identical protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070335 // aspartate binding // inferred from sequence or structural similarity","chr2:27440257-27468832 (+) // 94.29 // p23.3"]
["11729274_a_at",0.051540375,0.079851866,-0.21217632,-0.10565138,0.0077877045,-0.0077877045,0.97838354,0.9376291,1.0057621,0.008289095,1.0057621,"up","GBP5",115362,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0071346 // cellular response to interferon-gamma // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr1:89724632-89736546 (-) // 76.63 // p22.2"]
["11726372_a_at",0.11275196,0.046126842,-0.100557804,0.121786594,-0.046126842,-0.16709518,0.86142844,0.6587281,1.0352067,0.049918827,1.0352067,"up","STAU2",27067,"0006810 // transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // traceable author statement","chr8:74461658-74659857 (-) // 96.22 // q21.11"]
["11739071_a_at",0.14777946,0.007458687,-0.040037155,0.057440758,-0.007458687,-0.19486141,0.7095081,0.41013435,1.0619335,0.08669345,1.0619335,"up","EPDR1",54749,"0007160 // cell-matrix adhesion // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr7:37960162-37991623 (+) // 78.7 // p14.1"]
["11731510_at",-0.21873093,-0.071410656,-0.03136587,0.15540314,0.16513968,0.031365395,0.21367058,0.034732625,-1.1683495,-0.22447191,1.1683495,"down","DBT",1629,"0008152 // metabolic process // inferred from electronic annotation /// 0009083 // branched chain family amino acid catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046949 // fatty-acyl-CoA biosynthetic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0005947 // mitochondrial alpha-ketoglutarate dehydrogenase complex // traceable author statement /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0042645 // mitochondrial nucleoid // inferred from direct assay","0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0043754 // dihydrolipoyllysine-residue (2-methylpropanoyl)transferase activity // inferred from electronic annotation /// 0048037 // cofactor binding // inferred from electronic annotation","chr1:100652477-100715409 (-) // 67.23 // p21.2"]
["11745348_x_at",-0.010124683,0.07214737,0.011624336,-0.19717503,0.01012516,-0.049684048,0.5038168,0.19385782,1.0743473,0.10346039,1.0743473,"up","C15orf27",123591,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr15:76352298-76497303 (+) // 98.61 // q24.2"]
["11753686_s_at",0.34632206,0.158494,0.08628273,-0.08628273,-0.12931919,-0.114622116,0.15134089,0.017378388,1.2372247,0.30710754,1.2372247,"up","AGTRAP",57085,"0001666 // response to hypoxia // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004945 // angiotensin type II receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr1:11796265-11810249 (+) // 99.58 // p36.22"]
["11735824_at",-0.24473381,-0.02219677,-0.29275656,0.02219677,0.044075966,0.276433,0.2840989,0.06114496,-1.2318252,-0.30079758,1.2318252,"down","RRH",10692,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0007601 // visual perception // traceable author statement /// 0007602 // phototransduction // inferred from electronic annotation /// 0018298 // protein-chromophore linkage // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0009881 // photoreceptor activity // inferred from electronic annotation","chr4:110749149-110765867 (+) // 90.56 // q25"]
["11720697_a_at",0.38666534,-0.0044546127,-0.06724167,0.2638836,0.0044546127,-0.18858147,0.8845923,0.7057218,1.0558494,0.07840411,1.0558494,"up","HDAC7",51564,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007043 // cell-cell junction assembly // inferred from electronic annotation /// 0007219 // Notch signaling pathway // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016575 // histone deacetylation // inferred from electronic annotation /// 0032703 // negative regulation of interleukin-2 production // inferred from direct assay /// 0045668 // negative regulation of osteoblast differentiation // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0090050 // positive regulation of cell migration involved in sprouting angiogenesis // inferred from mutant phenotype","0000118 // histone deacetylase complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003682 // chromatin binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0004407 // histone deacetylase activity // inferred from electronic annotation /// 0005080 // protein kinase C binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0031078 // histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0032041 // NAD-dependent histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0032129 // histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0033613 // activating transcription factor binding // inferred from physical interaction /// 0034739 // histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation /// 0046969 // NAD-dependent histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0046970 // NAD-dependent histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation /// 0070491 // repressing transcription factor binding // inferred from physical interaction /// 0071889 // 14-3-3 protein binding // inferred from direct assay","chr12:48176508-48213763 (-) // 96.95 // q13.11"]
["11726960_a_at",0.05513048,0.04295063,0.061267376,-0.25577593,-0.04295063,-0.19220686,0.18763497,0.026679883,1.1621213,0.21676065,1.1621213,"up","GRIN2A",2903,"0001508 // regulation of action potential // inferred from electronic annotation /// 0001964 // startle response // inferred from electronic annotation /// 0001975 // response to amphetamine // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0007215 // glutamate receptor signaling pathway // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007611 // learning or memory // traceable author statement /// 0007611 // learning or memory // inferred from electronic annotation /// 0007612 // learning // inferred from electronic annotation /// 0007613 // memory // inferred from electronic annotation /// 0008104 // protein localization // inferred from electronic annotation /// 0008542 // visual learning // inferred from electronic annotation /// 0009416 // response to light stimulus // inferred from electronic annotation /// 0009611 // response to wounding // inferred from electronic annotation /// 0009743 // response to carbohydrate stimulus // inferred from electronic annotation /// 0010042 // response to manganese ion // inferred from electronic annotation /// 0010942 // positive regulation of cell death // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014075 // response to amine stimulus // inferred from electronic annotation /// 0019233 // sensory perception of pain // inferred from electronic annotation /// 0021510 // spinal cord development // inferred from electronic annotation /// 0021766 // hippocampus development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from electronic annotation /// 0030431 // sleep // inferred from electronic annotation /// 0033058 // directional locomotion // inferred from electronic annotation /// 0035235 // ionotropic glutamate receptor signaling pathway // inferred from electronic annotation /// 0040011 // locomotion // inferred from electronic annotation /// 0042177 // negative regulation of protein catabolic process // inferred from electronic annotation /// 0042220 // response to cocaine // inferred from electronic annotation /// 0042391 // regulation of membrane potential // inferred from electronic annotation /// 0042417 // dopamine metabolic process // inferred from electronic annotation /// 0042428 // serotonin metabolic process // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from direct assay /// 0045471 // response to ethanol // inferred from electronic annotation /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048511 // rhythmic process // inferred from electronic annotation /// 0050804 // regulation of synaptic transmission // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from electronic annotation /// 0051597 // response to methylmercury // inferred from electronic annotation /// 0051707 // response to other organism // inferred from electronic annotation /// 0051930 // regulation of sensory perception of pain // inferred from electronic annotation /// 0060078 // regulation of postsynaptic membrane potential // inferred from electronic annotation /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from electronic annotation /// 0060359 // response to ammonium ion // inferred from electronic annotation /// 0060992 // response to fungicide // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation /// 0071286 // cellular response to magnesium ion // inferred from electronic annotation /// 0071287 // cellular response to manganese ion // inferred from electronic annotation /// 0071294 // cellular response to zinc ion // inferred from electronic annotation /// 0071359 // cellular response to dsRNA // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0071396 // cellular response to lipid // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from sequence or structural similarity /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0017146 // N-methyl-D-aspartate selective glutamate receptor complex // inferred from direct assay /// 0017146 // N-methyl-D-aspartate selective glutamate receptor complex // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030288 // outer membrane-bounded periplasmic space // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043195 // terminal button // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004970 // ionotropic glutamate receptor activity // inferred from electronic annotation /// 0004972 // N-methyl-D-aspartate selective glutamate receptor activity // inferred from electronic annotation /// 0004972 // N-methyl-D-aspartate selective glutamate receptor activity // traceable author statement /// 0005215 // transporter activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005234 // extracellular-glutamate-gated ion channel activity // inferred from electronic annotation /// 0005261 // cation channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from sequence or structural similarity /// 0016595 // glutamate binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0022843 // voltage-gated cation channel activity // inferred from electronic annotation /// 0035254 // glutamate receptor binding // inferred from electronic annotation /// 0042165 // neurotransmitter binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050839 // cell adhesion molecule binding // inferred from electronic annotation /// 0051117 // ATPase binding // inferred from electronic annotation","chr16:9847260-10276263 (-) // 96.57 // p13.2"]
["11735515_at",0.087654114,-0.054701805,-0.14681673,-0.042545795,0.042545557,0.1900146,0.66570485,0.35205066,-1.0727344,-0.10129286,1.0727344,"down","PATE4",399968,"0009611 // response to wounding // inferred from electronic annotation /// 0050804 // regulation of synaptic transmission // inferred from electronic annotation","0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","","chr11:125703210-125709967 (+) // 53.04 // q24.2"]
["11728352_x_at",0.019950867,-0.08867073,-0.18156147,-0.018026352,0.018026352,0.06909466,0.47042432,0.16883431,-1.0765823,-0.10645863,1.0765823,"down","EFEMP2",30008,"0007596 // blood coagulation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005604 // basement membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0005201 // extracellular matrix structural constituent // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr11:65633917-65640340 (-) // 89.59 // q13.1"]
["11759108_at",-0.5014124,0.13165808,0.09427214,-0.37799788,-0.05052519,0.05052519,0.9627513,0.8947282,1.0239689,0.034171946,1.0239689,"up","KRIT1",889,"0001525 // angiogenesis // inferred from electronic annotation /// 0001937 // negative regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0010596 // negative regulation of endothelial cell migration // inferred from mutant phenotype /// 0016525 // negative regulation of angiogenesis // inferred from mutant phenotype /// 0016525 // negative regulation of angiogenesis // inferred from electronic annotation /// 0032092 // positive regulation of protein binding // inferred from electronic annotation /// 0045454 // cell redox homeostasis // inferred from mutant phenotype /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 2000114 // regulation of establishment of cell polarity // inferred from mutant phenotype /// 2000114 // regulation of establishment of cell polarity // inferred from electronic annotation /// 2000352 // negative regulation of endothelial cell apoptotic process // inferred from mutant phenotype","0005856 // cytoskeleton // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0005083 // small GTPase regulator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr7:91828282-91875237 (-) // 83.25 // q21.2"]
["11744289_a_at",0.071398735,0.04877758,0.034276962,-0.034276962,-0.09520054,-0.090854645,0.084092006,0.0050664605,1.0904536,0.124928415,1.0904536,"up","JMJD6",23210,"0001568 // blood vessel development // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0002040 // sprouting angiogenesis // inferred from sequence or structural similarity /// 0002040 // sprouting angiogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0018395 // peptidyl-lysine hydroxylation to 5-hydroxy-L-lysine // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0042116 // macrophage activation // inferred from electronic annotation /// 0043277 // apoptotic cell clearance // inferred from electronic annotation /// 0043654 // recognition of apoptotic cell // inferred from electronic annotation /// 0048024 // regulation of nuclear mRNA splicing, via spliceosome // inferred from mutant phenotype /// 0048024 // regulation of nuclear mRNA splicing, via spliceosome // inferred from electronic annotation /// 0048821 // erythrocyte development // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060041 // retina development in camera-type eye // inferred from electronic annotation /// 0070078 // histone H3-R2 demethylation // inferred from direct assay /// 0070079 // histone H4-R3 demethylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation","0003723 // RNA binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003727 // single-stranded RNA binding // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0033746 // histone demethylase activity (H3-R2 specific) // inferred from direct assay /// 0033749 // histone demethylase activity (H4-R3 specific) // inferred from direct assay /// 0042802 // identical protein binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070815 // peptidyl-lysine 5-dioxygenase activity // inferred from direct assay","chr17:74714532-74722881 (-) // 97.67 // q25.1"]
["11748286_s_at",-0.025008678,0.015907764,-0.10735369,-0.015907288,0.21702957,0.18732119,0.3787707,0.10839766,-1.123733,-0.16829935,1.123733,"down","FAM219B",57184,"","","","chr15:75194162-75199221 (-) // 99.94 // q24.1"]
["11753441_a_at",-0.036370754,-0.0005965233,0.14651394,-0.29180002,0.0005965233,0.024117947,0.6559432,0.3400252,1.090919,0.12554401,1.090919,"up","HILS1",373861,"0006334 // nucleosome assembly // inferred from electronic annotation /// 0006338 // chromatin remodeling // non-traceable author statement /// 0006342 // chromatin silencing // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007281 // germ cell development // inferred from direct assay /// 0007283 // spermatogenesis // inferred from direct assay /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030261 // chromosome condensation // inferred from direct assay","0000786 // nucleosome // inferred from direct assay /// 0000786 // nucleosome // inferred from electronic annotation /// 0001673 // male germ cell nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0042393 // histone binding // inferred from direct assay","chr17:48248810-48249837 (-) // 98.28 // q21.33"]
["11715517_s_at",0.1209774,0.03307438,0.0039987564,-0.018080711,-0.0039987564,-0.018216133,0.42400366,0.1358421,1.046894,0.06611531,1.046894,"up","SLC25A39",51629,"0006783 // heme biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr17:42396995-42402195 (-) // 72.66 // q21.31"]
["11735519_a_at",0.34284544,0.041810036,0.011474133,-0.29629254,-0.031439304,-0.011474133,0.4520958,0.15496895,1.1851846,0.24511178,1.1851846,"up","ART5",116969,"0006471 // protein ADP-ribosylation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation","0003950 // NAD+ ADP-ribosyltransferase activity // inferred from electronic annotation /// 0003953 // NAD+ nucleosidase activity // inferred from electronic annotation /// 0003956 // NAD(P)+-protein-arginine ADP-ribosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr11:3659735-3663511 (-) // 97.31 // p15.4"]
["11756363_a_at",-0.0386343,0.06375837,-0.11732674,0.19806147,-0.006585598,0.006585121,0.63359934,0.31549594,-1.0693651,-0.09675456,1.0693651,"down","NCKAP1L",3071,"0001782 // B cell homeostasis // inferred from sequence or structural similarity /// 0001782 // B cell homeostasis // inferred from electronic annotation /// 0002262 // myeloid cell homeostasis // inferred from sequence or structural similarity /// 0002262 // myeloid cell homeostasis // inferred from electronic annotation /// 0006461 // protein complex assembly // inferred from sequence or structural similarity /// 0006461 // protein complex assembly // inferred from electronic annotation /// 0030011 // maintenance of cell polarity // inferred from mutant phenotype /// 0030593 // neutrophil chemotaxis // inferred from direct assay /// 0030838 // positive regulation of actin filament polymerization // inferred from mutant phenotype /// 0030838 // positive regulation of actin filament polymerization // inferred from electronic annotation /// 0030866 // cortical actin cytoskeleton organization // inferred from mutant phenotype /// 0030890 // positive regulation of B cell proliferation // inferred from mutant phenotype /// 0032700 // negative regulation of interleukin-17 production // inferred from sequence or structural similarity /// 0032700 // negative regulation of interleukin-17 production // inferred from electronic annotation /// 0032715 // negative regulation of interleukin-6 production // inferred from sequence or structural similarity /// 0032715 // negative regulation of interleukin-6 production // inferred from electronic annotation /// 0032855 // positive regulation of Rac GTPase activity // inferred from mutant phenotype /// 0033630 // positive regulation of cell adhesion mediated by integrin // inferred from sequence or structural similarity /// 0033630 // positive regulation of cell adhesion mediated by integrin // inferred from electronic annotation /// 0035509 // negative regulation of myosin-light-chain-phosphatase activity // inferred from mutant phenotype /// 0042102 // positive regulation of T cell proliferation // inferred from sequence or structural similarity /// 0042102 // positive regulation of T cell proliferation // inferred from electronic annotation /// 0042221 // response to chemical stimulus // inferred from direct assay /// 0042327 // positive regulation of phosphorylation // inferred from mutant phenotype /// 0042493 // response to drug // inferred from mutant phenotype /// 0043029 // T cell homeostasis // inferred from sequence or structural similarity /// 0043029 // T cell homeostasis // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043372 // positive regulation of CD4-positive, alpha-beta T cell differentiation // inferred from sequence or structural similarity /// 0043372 // positive regulation of CD4-positive, alpha-beta T cell differentiation // inferred from electronic annotation /// 0043378 // positive regulation of CD8-positive, alpha-beta T cell differentiation // inferred from sequence or structural similarity /// 0043378 // positive regulation of CD8-positive, alpha-beta T cell differentiation // inferred from electronic annotation /// 0045579 // positive regulation of B cell differentiation // inferred from sequence or structural similarity /// 0045579 // positive regulation of B cell differentiation // inferred from electronic annotation /// 0045588 // positive regulation of gamma-delta T cell differentiation // inferred from sequence or structural similarity /// 0045588 // positive regulation of gamma-delta T cell differentiation // inferred from electronic annotation /// 0045621 // positive regulation of lymphocyte differentiation // inferred from sequence or structural similarity /// 0045621 // positive regulation of lymphocyte differentiation // inferred from electronic annotation /// 0045648 // positive regulation of erythrocyte differentiation // inferred from sequence or structural similarity /// 0045648 // positive regulation of erythrocyte differentiation // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from mutant phenotype /// 0048821 // erythrocyte development // inferred from expression pattern /// 0050853 // B cell receptor signaling pathway // inferred from mutant phenotype /// 0060100 // positive regulation of phagocytosis, engulfment // inferred from sequence or structural similarity /// 0060100 // positive regulation of phagocytosis, engulfment // inferred from electronic annotation /// 0070358 // actin polymerization-dependent cell motility // inferred from mutant phenotype /// 0090023 // positive regulation of neutrophil chemotaxis // inferred from sequence or structural similarity /// 0090023 // positive regulation of neutrophil chemotaxis // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031209 // SCAR complex // inferred from direct assay /// 0031209 // SCAR complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0030295 // protein kinase activator activity // inferred from mutant phenotype /// 0030675 // Rac GTPase activator activity // inferred from mutant phenotype /// 0032403 // protein complex binding // inferred from direct assay","chr12:54891541-54936799 (+) // 92.08 // q13.13"]
["11756618_x_at",-0.009840012,0.009840012,0.113303185,-0.25504684,-0.01879692,0.19748688,0.86493516,0.6665382,1.044795,0.06321995,1.044795,"up","TAPBP",6892,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006461 // protein complex assembly // traceable author statement /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // non-traceable author statement /// 0006955 // immune response // traceable author statement /// 0019885 // antigen processing and presentation of endogenous peptide antigen via MHC class I // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0050823 // peptide antigen stabilization // inferred from sequence or structural similarity","0000139 // Golgi membrane // inferred from direct assay /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0042824 // MHC class I peptide loading complex // non-traceable author statement /// 0042825 // TAP complex // inferred from direct assay /// 0071556 // integral to lumenal side of endoplasmic reticulum membrane // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0015433 // peptide antigen-transporting ATPase activity // traceable author statement /// 0042288 // MHC class I protein binding // traceable author statement /// 0042605 // peptide antigen binding // traceable author statement /// 0046978 // TAP1 binding // inferred from physical interaction /// 0046978 // TAP1 binding // traceable author statement /// 0046979 // TAP2 binding // inferred from physical interaction /// 0046979 // TAP2 binding // traceable author statement /// 0051082 // unfolded protein binding // traceable author statement","chr6:33271731-33282028 (-) // 91.37 // p21.32"]
["11716242_a_at",0.20443916,-0.009634018,-0.09877205,0.2732277,0.009634018,-0.01602745,0.87267226,0.6817603,-1.0402524,-0.056933682,1.0402524,"down","PES1",23481,"0000089 // mitotic metaphase // inferred from electronic annotation /// 0000463 // maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) // inferred from mutant phenotype /// 0000466 // maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) // inferred from mutant phenotype /// 0006364 // rRNA processing // inferred from mutant phenotype /// 0006364 // rRNA processing // inferred from electronic annotation /// 0007000 // nucleolus organization // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0008283 // cell proliferation // non-traceable author statement /// 0033365 // protein localization to organelle // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0042273 // ribosomal large subunit biogenesis // inferred by curator /// 0051726 // regulation of cell cycle // inferred from mutant phenotype","0000793 // condensed chromosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0030687 // preribosome, large subunit precursor // inferred from direct assay /// 0070545 // PeBoW complex // inferred from direct assay /// 0070545 // PeBoW complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr22:30972611-31003070 (-) // 93.34 // q12.2"]
["11724558_at",0.14256096,-0.06729889,-0.47330523,0.06729889,-0.07760811,0.24599028,0.6698803,0.3579922,-1.157684,-0.21124147,1.157684,"down","GNA15",2769,"0006184 // GTP catabolic process // traceable author statement /// 0006471 // protein ADP-ribosylation // inferred from electronic annotation /// 0007165 // signal transduction // inferred from genetic interaction /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // not recorded /// 0007200 // phospholipase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from genetic interaction /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0007207 // phospholipase C-activating G-protein coupled acetylcholine receptor signaling pathway // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0032957 // inositol trisphosphate metabolic process // inferred from electronic annotation /// 0060158 // phospholipase C-activating dopamine receptor signaling pathway // not recorded","0005834 // heterotrimeric G-protein complex // not recorded /// 0005834 // heterotrimeric G-protein complex // non-traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0031234 // extrinsic to internal side of plasma membrane // not recorded","0000166 // nucleotide binding // inferred from electronic annotation /// 0001664 // G-protein coupled receptor binding // not recorded /// 0003924 // GTPase activity // traceable author statement /// 0004871 // signal transducer activity // inferred from genetic interaction /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005525 // GTP binding // non-traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // not recorded /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:3136026-3163747 (+) // 97.68 // p13.3"]
["11727651_at",-0.22531366,-0.17301154,0.19211817,0.14823651,-0.0046908855,0.004691124,0.73663867,0.447173,-1.0853406,-0.11814788,1.0853406,"down","SRRM4",84530,"0006397 // mRNA processing // inferred from sequence or structural similarity /// 0006397 // mRNA processing // inferred from electronic annotation /// 0007399 // nervous system development // inferred from sequence or structural similarity /// 0007399 // nervous system development // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0043484 // regulation of RNA splicing // inferred from sequence or structural similarity /// 0043484 // regulation of RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from sequence or structural similarity /// 0003729 // mRNA binding // inferred from electronic annotation","chr12:119419290-119600856 (+) // 90.91 // q24.23"]
["11742447_x_at",-0.05805254,0.23408723,0.15705657,-0.24771833,-0.037292957,0.037292957,0.4965339,0.1881886,1.1436164,0.19360326,1.1436164,"up","RNF222",643904,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:8294024-8301144 (-) // 83.91 // p13.1"]
["11736813_at",-0.08240795,0.057197094,0,-0.15919209,0,0.06178999,0.9139437,0.77110934,1.0168196,0.02406374,1.0168196,"up","PDCD1LG2",80380,"0006955 // immune response // non-traceable author statement /// 0031295 // T cell costimulation // traceable author statement /// 0042102 // positive regulation of T cell proliferation // inferred from electronic annotation /// 0042130 // negative regulation of T cell proliferation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr9:5510526-5571282 (+) // 97.42 // p24.1"]
["11726057_a_at",0.16974735,0.043018818,0.052326202,-0.04301834,-0.15560532,-0.14209747,0.16309457,0.020203982,1.1502423,0.20193784,1.1502423,"up","SMEK2",57223,"","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","","chr2:55775014-55844796 (-) // 96.01 // p16.1"]
["11726123_a_at",0.35204554,0.0009651184,0.10439062,-0.119463444,-0.20843697,-0.0009651184,0.354276,0.09479781,1.1992139,0.26208895,1.1992139,"up","EVPL",2125,"0008544 // epidermis development // traceable author statement /// 0018149 // peptide cross-linking // inferred from direct assay /// 0030216 // keratinocyte differentiation // inferred from direct assay /// 0031424 // keratinization // inferred from electronic annotation","0001533 // cornified envelope // inferred from direct assay /// 0001533 // cornified envelope // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030057 // desmosome // inferred from electronic annotation","0005198 // structural molecule activity // inferred from direct assay /// 0005198 // structural molecule activity // traceable author statement /// 0030674 // protein binding, bridging // inferred from direct assay","chr17:74002926-74023533 (-) // 98.84 // q25.1"]
["11756989_x_at",0.18400002,0.14150524,0.0932951,-0.09329414,-0.16183567,-0.1754837,0.04907194,0.0014901896,1.2168387,0.28313795,1.2168387,"up","KRT8",3856,"0007010 // cytoskeleton organization // non-traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005882 // intermediate filament // non-traceable author statement /// 0005882 // intermediate filament // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0045095 // keratin filament // inferred from electronic annotation","0005198 // structural molecule activity // non-traceable author statement /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr8:62490714-62492428 (+) // 97.07 // q12.3 /// chr12:53291013-53298829 (-) // 95.82 // q13.13"]
["11750152_a_at",-0.43180084,-0.02472496,0.15882587,-0.29409027,0.065142155,0.02472496,0.9606633,0.8882991,-1.0218326,-0.031158848,1.0218326,"down","SLC23A2",9962,"0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0015851 // nucleobase transport // traceable author statement /// 0015882 // L-ascorbic acid transport // inferred from direct assay /// 0015882 // L-ascorbic acid transport // inferred from electronic annotation /// 0015993 // molecular hydrogen transport // non-traceable author statement /// 0019852 // L-ascorbic acid metabolic process // non-traceable author statement /// 0019852 // L-ascorbic acid metabolic process // traceable author statement /// 0019852 // L-ascorbic acid metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070904 // transepithelial L-ascorbic acid transport // inferred from direct assay","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009925 // basal plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from direct assay","0005215 // transporter activity // inferred from electronic annotation /// 0008520 // L-ascorbate:sodium symporter activity // inferred from electronic annotation /// 0008523 // sodium-dependent multivitamin transmembrane transporter activity // non-traceable author statement /// 0015205 // nucleobase transmembrane transporter activity // traceable author statement /// 0015229 // L-ascorbic acid transporter activity // inferred from direct assay /// 0015229 // L-ascorbic acid transporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation /// 0070890 // sodium-dependent L-ascorbate transmembrane transporter activity // inferred from direct assay","chr20:4850234-4951562 (-) // 94.17 // p13"]
["11733726_a_at",-0.05320835,0.39621735,0.21225977,-0.6721716,-0.4578967,0.05320835,0.35727745,0.09665359,1.4580528,0.5440429,1.4580528,"up","SNAP25",6616,"0001504 // neurotransmitter uptake // non-traceable author statement /// 0006112 // energy reserve metabolic process // traceable author statement /// 0007268 // synaptic transmission // non-traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // non-traceable author statement /// 0007269 // neurotransmitter secretion // traceable author statement /// 0007269 // neurotransmitter secretion // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007616 // long-term memory // inferred from electronic annotation /// 0014047 // glutamate secretion // traceable author statement /// 0016081 // synaptic vesicle docking involved in exocytosis // non-traceable author statement /// 0016197 // endosomal transport // inferred from electronic annotation /// 0030252 // growth hormone secretion // inferred from electronic annotation /// 0030431 // sleep // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046887 // positive regulation of hormone secretion // inferred from electronic annotation /// 0048791 // calcium ion-dependent exocytosis of neurotransmitter // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // traceable author statement /// 0051963 // regulation of synapse assembly // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008076 // voltage-gated potassium channel complex // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030426 // growth cone // inferred from sequence or structural similarity /// 0030426 // growth cone // inferred from electronic annotation /// 0031201 // SNARE complex // inferred from sequence or structural similarity /// 0031201 // SNARE complex // inferred from electronic annotation /// 0043005 // neuron projection // inferred from sequence or structural similarity /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043229 // intracellular organelle // inferred from electronic annotation /// 0044295 // axonal growth cone // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070032 // synaptobrevin 2-SNAP-25-syntaxin-1a-complexin I complex // inferred from electronic annotation /// 0070044 // synaptobrevin 2-SNAP-25-syntaxin-1a complex // inferred from electronic annotation","0000149 // SNARE binding // inferred from electronic annotation /// 0005249 // voltage-gated potassium channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017022 // myosin binding // inferred from electronic annotation /// 0017075 // syntaxin-1 binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from electronic annotation","chr20:10199473-10288065 (+) // 94.92 // p12.2"]
["11719702_a_at",0.4431038,0.19199276,0.11519432,-0.11519432,-0.30537987,-0.30448437,0.13554753,0.013855014,1.4061818,0.49178314,1.4061818,"up","FARP1",10160,"0010923 // negative regulation of phosphatase activity // inferred from direct assay /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0019898 // extrinsic to membrane // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // traceable author statement /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation","chr13:98795363-99102023 (+) // 94.6 // q32.2"]
["11743917_a_at",0.05126524,0.14247656,0.18610954,-0.051264763,-0.34435368,-0.2209692,0.1782664,0.023981785,1.2588849,0.33214638,1.2588849,"up","FKBP5",2289,"0000413 // protein peptidyl-prolyl isomerization // not recorded /// 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006457 // protein folding // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0018208 // peptidyl-proline modification // not recorded","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // not recorded","0003755 // peptidyl-prolyl cis-trans isomerase activity // not recorded /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0005528 // FK506 binding // not recorded /// 0005528 // FK506 binding // traceable author statement /// 0016853 // isomerase activity // inferred from electronic annotation /// 0031072 // heat shock protein binding // inferred from physical interaction","chr6:35540716-35696360 (-) // 88.54 // p21.31"]
["11736807_at",0.071106434,0.028458595,0.27561712,-0.028458357,-0.11040568,-0.07939148,0.3002652,0.06859384,1.146958,0.19781256,1.146958,"up","GABRA4",2557,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from electronic annotation /// 0007214 // gamma-aminobutyric acid signaling pathway // inferred from electronic annotation /// 0007214 // gamma-aminobutyric acid signaling pathway // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007417 // central nervous system development // inferred from electronic annotation /// 0034220 // ion transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 2001023 // regulation of response to drug // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0034707 // chloride channel complex // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004890 // GABA-A receptor activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from electronic annotation /// 0008503 // benzodiazepine receptor activity // traceable author statement","chr4:46920916-46996424 (-) // 83.89 // p12"]
["11746675_a_at",0.08621216,0.13300514,0.16341305,-0.08621216,-0.19380474,-0.16170502,0.057002112,0.0021395267,1.209813,0.27478406,1.209813,"up","ZNF232",7775,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:5009223-5026411 (-) // 91.98 // p13.2"]
["11735858_a_at",0.018539429,-0.02157712,-0.1308515,0.026614428,0,0,0.62489486,0.30497357,-1.0377804,-0.0535012,1.0377804,"down","RIIAD1",284485,"0007165 // signal transduction // inferred from electronic annotation","","0008603 // cAMP-dependent protein kinase regulator activity // inferred from electronic annotation","chr1:151694074-151702076 (+) // 81.82 // q21.3"]
["11734878_at",-0.10106373,-0.015353918,0.015353918,-0.069547415,0.06443858,0.124750376,0.65101886,0.33484945,-1.0523163,-0.07356842,1.0523163,"down","TMEM30B",161291,"0070863 // positive regulation of protein exit from endoplasmic reticulum // inferred from direct assay","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr14:61744087-61748558 (-) // 92.78 // q23.1"]
["11754921_a_at",-0.10491371,-0.0012559891,-0.05487871,0.06818771,0.0012559891,0.04687977,0.28474504,0.06141085,-1.0661846,-0.0924573,1.0661846,"down","TMEM168",64418,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from direct assay","","chr7:112407140-112430448 (-) // 99.25 // q31.1"]
["11764075_at",-0.028499603,-0.002861023,0.002861023,-0.103768826,0.11818552,0.1612916,0.7422995,0.4566055,-1.0483128,-0.068069234,1.0483128,"down","","","","","","chr10:48382335-48382847 (+) // 17.3 // q11.22"]
["AFFX-BkGr-GC21_at",-0.096652985,0.09231806,0.07730436,-0.15118408,-0.07730436,0.11878729,0.81836945,0.5784834,1.0431092,0.060890168,1.0431092,"up",-0.15118408,-0.07730436,0.11878729,-0.096652985,0.09231806,0.07730436]
["11719396_a_at",0.17997265,0.03410244,-0.03710556,-0.178792,0.034744263,-0.03410244,0.57699937,0.25729302,1.0855101,0.11837319,1.0855101,"up","EXTL2",2135,"0006044 // N-acetylglucosamine metabolic process // inferred from direct assay /// 0015012 // heparan sulfate proteoglycan biosynthetic process // inferred from electronic annotation /// 0019276 // UDP-N-acetylgalactosamine metabolic process // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031227 // intrinsic to endoplasmic reticulum membrane // inferred from electronic annotation","0001888 // glucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity // inferred from direct assay /// 0001888 // glucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016758 // transferase activity, transferring hexosyl groups // inferred from electronic annotation /// 0035248 // alpha-1,4-N-acetylgalactosaminyltransferase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:101337942-101361558 (-) // 94.11 // p21.2"]
["11752772_a_at",0.1431117,-0.110554695,0.09074879,-0.16612196,0.009435654,-0.009435654,0.6787162,0.36845377,1.0691587,0.096475974,1.0691587,"up","KLHL3",26249,"0016567 // protein ubiquitination // inferred from electronic annotation /// 0016567 // protein ubiquitination // traceable author statement /// 0070294 // renal sodium ion absorption // inferred from mutant phenotype /// 0072156 // distal tubule morphogenesis // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0031463 // Cul3-RING ubiquitin ligase complex // traceable author statement","0003779 // actin binding // inferred from electronic annotation /// 0005198 // structural molecule activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr5:136957627-137042116 (-) // 99.87 // q31.2"]
["11740464_a_at",-0.14699268,0.23773623,-0.2769289,-0.07363176,0.07363176,0.15893888,0.7921084,0.5329358,-1.0830061,-0.11504143,1.0830061,"down","PLCH1",23007,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0048015 // phosphatidylinositol-mediated signaling // inferred from direct assay","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0004435 // phosphatidylinositol phospholipase C activity // inferred from electronic annotation /// 0004629 // phospholipase C activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008081 // phosphoric diester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050429 // calcium-dependent phospholipase C activity // inferred from direct assay","chr3:155197670-155394205 (-) // 98.98 // q25.31"]
["11744568_at",-0.0064418316,-0.15934181,-0.03119278,0.013703346,0.0064418316,0.072226286,0.42400366,0.13584942,-1.0691389,-0.09644928,1.0691389,"down","STGC3",474171,"","","","chr3:49297517-49298811 (+) // 75.19 // p21.31"]
["11719241_x_at",-0.08500862,0.02039051,-0.020390987,-0.2313528,0.0635643,0.10932541,0.97924626,0.94033116,-1.0061523,-0.008848661,1.0061523,"down","CAMK2N1",55450,"0006469 // negative regulation of protein kinase activity // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004860 // protein kinase inhibitor activity // inferred from electronic annotation /// 0008427 // calcium-dependent protein kinase inhibitor activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation","chr1:20808883-20812728 (-) // 67.48 // p36.12"]
["11745699_a_at",-0.014074326,0.014074564,0.23257685,-0.052942514,0.08133674,-0.029090643,0.72196734,0.42799166,1.0553765,0.077757806,1.0553765,"up","KLRF1",51348,"0007166 // cell surface receptor signaling pathway // traceable author statement","0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0032393 // MHC class I receptor activity // traceable author statement","chr12:9980116-9997256 (+) // 100.0 // p13.31"]
["11741329_x_at",0.2412324,0.10663462,-0.014268875,0.014268637,-0.09319019,-0.053856373,0.4059821,0.12457679,1.1137757,0.15545876,1.1137757,"up","GAGE1",2543,"0006968 // cellular defense response // traceable author statement","","","chrX:49363615-49370958 (+) // 66.53 // p11.23"]
["11750174_a_at",0.09871626,-0.20214033,-0.17349672,-0.09871626,0.60771656,0.6199961,0.4321237,0.1413205,-1.3838035,-0.46863908,1.3838035,"down","LOC645954",645954,"","","0003779 // actin binding // inferred from electronic annotation","chr10:30984849-31005942 (+) // 94.02 // p11.23"]
["11722617_at",0.05400181,0.29845,-0.0059490204,0.0059490204,-0.20976353,-0.012514114,0.48675093,0.18081573,1.1388758,0.18761048,1.1388758,"up","RIPK4",54101,"0002009 // morphogenesis of an epithelium // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr21:43159532-43187282 (-) // 98.76 // q22.3"]
["11730810_at",0.10168171,-0.010523558,-0.008530617,0.008530378,0.010523319,-0.04710102,0.72008914,0.42534754,1.0259011,0.036891628,1.0259011,"up","LRRTM2",26045,"","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","","chr5:138204674-138211057 (-) // 99.14 // q31.2"]
["11748480_a_at",-0.1321969,-0.030846119,0.030846119,-0.10615158,0.076527596,0.049609184,0.79119134,0.5315774,-1.035787,-0.050727338,1.035787,"down","TTYH2",94015,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0034707 // chloride channel complex // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr17:72211756-72256790 (+) // 99.21 // q25.1"]
["11753924_a_at",0.11454868,-0.047828674,-0.11544514,0.09947872,-0.0015563965,0.0015563965,0.80263835,0.5505296,-1.0348353,-0.049401227,1.0348353,"down","ATG3",64422,"0000045 // autophagic vacuole assembly // inferred from sequence or structural similarity /// 0000045 // autophagic vacuole assembly // inferred from electronic annotation /// 0006464 // cellular protein modification process // inferred from direct assay /// 0006612 // protein targeting to membrane // inferred from sequence or structural similarity /// 0006810 // transport // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0043653 // mitochondrial fragmentation involved in apoptotic process // inferred from sequence or structural similarity /// 0043653 // mitochondrial fragmentation involved in apoptotic process // inferred from electronic annotation","0000153 // cytoplasmic ubiquitin ligase complex // inferred from physical interaction /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0016874 // ligase activity // inferred from electronic annotation /// 0019776 // Atg8 ligase activity // inferred from sequence or structural similarity /// 0019776 // Atg8 ligase activity // inferred from electronic annotation /// 0019777 // Atg12 ligase activity // inferred from sequence or structural similarity /// 0019777 // Atg12 ligase activity // inferred from electronic annotation /// 0019787 // small conjugating protein ligase activity // inferred from direct assay /// 0019899 // enzyme binding // inferred from physical interaction","chr3:112251391-112280748 (-) // 95.01 // q13.2"]
["11718526_a_at",-0.016771317,-0.20442438,-0.011633873,0.01163435,0.32414627,0.44242382,0.3216341,0.07836565,-1.2631372,-0.33701137,1.2631372,"down","ESRRA",2101,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0030278 // regulation of ossification // inferred from electronic annotation /// 0030522 // intracellular receptor mediated signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0045667 // regulation of osteoblast differentiation // inferred from electronic annotation /// 0045670 // regulation of osteoclast differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051216 // cartilage development // inferred from electronic annotation","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // traceable author statement /// 0005496 // steroid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:64072999-64084215 (+) // 94.19 // q13.1"]
["11740504_at",-0.17254591,0.4130249,0.4130249,-0.03087902,-0.06740332,0.03087902,0.6102157,0.29014122,1.1812402,0.24030235,1.1812402,"up","ZNF680",340252,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:63985576-64023505 (-) // 40.43 // q11.21"]
["11723589_at",-0.13765335,-0.018503666,0.10811901,-0.56074476,0.034084797,0.01850319,0.77326024,0.50219256,1.1121666,0.15337297,1.1121666,"up","RC3H1",149041,"0000956 // nuclear-transcribed mRNA catabolic process // inferred from sequence or structural similarity /// 0000956 // nuclear-transcribed mRNA catabolic process // inferred from electronic annotation /// 0002634 // regulation of germinal center formation // inferred from sequence or structural similarity /// 0002634 // regulation of germinal center formation // inferred from electronic annotation /// 0002635 // negative regulation of germinal center formation // inferred from sequence or structural similarity /// 0002635 // negative regulation of germinal center formation // inferred from electronic annotation /// 0010608 // posttranscriptional regulation of gene expression // inferred from sequence or structural similarity /// 0010608 // posttranscriptional regulation of gene expression // inferred from electronic annotation /// 0016567 // protein ubiquitination // traceable author statement /// 0030889 // negative regulation of B cell proliferation // inferred from sequence or structural similarity /// 0030889 // negative regulation of B cell proliferation // inferred from electronic annotation /// 0033962 // cytoplasmic mRNA processing body assembly // inferred from sequence or structural similarity /// 0033962 // cytoplasmic mRNA processing body assembly // inferred from electronic annotation /// 0043488 // regulation of mRNA stability // inferred from sequence or structural similarity /// 0043488 // regulation of mRNA stability // inferred from electronic annotation /// 0045623 // negative regulation of T-helper cell differentiation // inferred from sequence or structural similarity /// 0045623 // negative regulation of T-helper cell differentiation // inferred from electronic annotation /// 0046007 // negative regulation of activated T cell proliferation // inferred from sequence or structural similarity /// 0046007 // negative regulation of activated T cell proliferation // inferred from electronic annotation /// 0050856 // regulation of T cell receptor signaling pathway // inferred from sequence or structural similarity /// 0050856 // regulation of T cell receptor signaling pathway // inferred from electronic annotation","0000932 // cytoplasmic mRNA processing body // inferred from sequence or structural similarity /// 0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0010494 // cytoplasmic stress granule // inferred from sequence or structural similarity /// 0010494 // cytoplasmic stress granule // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003730 // mRNA 3'-UTR binding // inferred from sequence or structural similarity /// 0003730 // mRNA 3'-UTR binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:173900223-173962345 (-) // 96.48 // q25.1"]
["11734729_a_at",-0.16866112,-0.1588788,0.09198451,-0.029803038,0.029803038,0.15898299,0.58600426,0.26632112,-1.0954418,-0.13151287,1.0954418,"down","SLC39A12",221074,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006829 // zinc ion transport // inferred from electronic annotation /// 0030001 // metal ion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0046873 // metal ion transmembrane transporter activity // inferred from electronic annotation","chr10:18240767-18332212 (+) // 98.53 // p12.33"]
["11732496_a_at",-0.23557615,-0.0611763,-0.458704,0.063269615,0.24109411,0.061175823,0.24275292,0.044845033,-1.2956403,-0.3736653,1.2956403,"down","AP1S3",130340,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral reproduction // traceable author statement /// 0016044 // cellular membrane organization // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0050690 // regulation of defense response to virus by virus // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0005765 // lysosomal membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0008565 // protein transporter activity // inferred from electronic annotation","chr2:224620046-224702452 (-) // 66.32 // q36.1"]
["11732011_at",-0.024953127,-0.08652568,-0.10804653,0.07882905,0.024953127,0.114742994,0.14302972,0.015493457,-1.1065103,-0.14601685,1.1065103,"down","TNFAIP8L3",388121,"","","","chr15:51348797-51397473 (-) // 78.83 // q21.2"]
["11734867_a_at",-0.03347063,0.03347063,-0.16307163,-0.18562174,0.03714943,0.24194098,0.81013685,0.5643721,-1.0610653,-0.085513465,1.0610653,"down","LOC100505861 /// TPRG1","100505861 /// 285386","","0005737 // cytoplasm // inferred from electronic annotation","","chr3:188889762-189041347 (+) // 75.84 // q28"]
["11739060_s_at",-0.27716732,-0.10632229,-0.1458416,0.10632229,0.32616234,0.68930054,0.21829675,0.036287773,-1.4644634,-0.55037206,1.4644634,"down","SLC7A5",8140,"0003333 // amino acid transmembrane transport // inferred from sequence or structural similarity /// 0003333 // amino acid transmembrane transport // inferred from electronic annotation /// 0006520 // cellular amino acid metabolic process // traceable author statement /// 0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006865 // amino acid transport // traceable author statement /// 0006865 // amino acid transport // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0015804 // neutral amino acid transport // inferred from sequence or structural similarity /// 0015804 // neutral amino acid transport // traceable author statement /// 0015807 // L-amino acid transport // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation","0015171 // amino acid transmembrane transporter activity // inferred from sequence or structural similarity /// 0015171 // amino acid transmembrane transporter activity // inferred from electronic annotation /// 0015175 // neutral amino acid transmembrane transporter activity // traceable author statement /// 0015179 // L-amino acid transmembrane transporter activity // inferred from electronic annotation /// 0042605 // peptide antigen binding // inferred from sequence or structural similarity","chr16:87863628-87903105 (-) // 92.7 // q24.2"]
["11742067_s_at",-0.109330654,0.063623905,-0.097052574,-0.063623905,0.23590136,0.12802434,0.5451457,0.22789614,-1.107792,-0.14768705,1.107792,"down","LRRTM4",80059,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:76974851-77749502 (-) // 98.64 // p12"]
["11743847_x_at",-0.116178274,-0.2801311,0.12220168,0.23923755,0.061147213,-0.06114745,0.62522084,0.30556902,-1.1259283,-0.17111494,1.1259283,"down","CFH",3075,"0006956 // complement activation // traceable author statement /// 0006957 // complement activation, alternative pathway // inferred from electronic annotation /// 0030449 // regulation of complement activation // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement","","chr1:196620883-196716632 (+) // 96.79 // q31.3"]
["11759240_x_at",0.09068942,0.09164095,-0.08117938,-0.012973309,-0.12635994,0.012973309,0.6637552,0.34940797,1.0539724,0.07583704,1.0539724,"up","PCDHGA8",9708,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr5:140769385-140776198 (+) // 89.15 // q31.3"]
["11723039_x_at",-0.180089,-0.21643543,-0.124279976,0.1846075,0.20208073,0.124279976,0.034514148,0.00064842857,-1.2692041,-0.34392413,1.2692041,"down","SRSF3",6428,"0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043274 // phospholipase binding // inferred from electronic annotation","chr6:36562089-36572244 (+) // 95.77 // p21.31"]
["11747978_a_at",-0.071568966,-0.019132137,-0.09739351,0.019132137,0.08286333,0.19429159,0.24361539,0.045157984,-1.1184188,-0.16146053,1.1184188,"down","MYRIP",25924,"0006886 // intracellular protein transport // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from sequence or structural similarity","0001750 // photoreceptor outer segment // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from electronic annotation /// 0031045 // dense core granule // inferred from sequence or structural similarity /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // non-traceable author statement /// 0017022 // myosin binding // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:40141501-40299833 (+) // 99.96 // p22.1"]
["11742223_a_at",-0.117593765,0.03514099,0.03514099,-0.06962538,0.06278896,-0.035141468,0.9925424,0.97934085,-1.0012331,-0.0017778926,1.0012331,"down","NOP14",8602,"0000447 // endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) // inferred from sequence or structural similarity /// 0000462 // maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) // inferred from sequence or structural similarity /// 0000472 // endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) // inferred from sequence or structural similarity /// 0000480 // endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) // inferred from sequence or structural similarity /// 0006364 // rRNA processing // inferred from sequence or structural similarity /// 0006364 // rRNA processing // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0042274 // ribosomal small subunit biogenesis // inferred from sequence or structural similarity","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from sequence or structural similarity /// 0005730 // nucleolus // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0030686 // 90S preribosome // inferred from sequence or structural similarity /// 0030692 // Noc4p-Nop14p complex // inferred from sequence or structural similarity /// 0032040 // small-subunit processome // inferred from sequence or structural similarity","0030515 // snoRNA binding // inferred from sequence or structural similarity","chr4:2939665-2965118 (-) // 97.99 // p16.3"]
["11739255_x_at",-0.66458225,-0.21663666,-0.32544136,0.21663666,0.43376255,0.28090382,0.10966098,0.008854125,-1.6388167,-0.71265453,1.6388167,"down","FAM84B",157638,"","0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr8:127564682-127570706 (-) // 94.05 // q24.21"]
["11725098_s_at",-0.08072233,-0.019162178,-0.009184837,0.009184837,0.086153984,0.03386593,0.2981254,0.067288935,-1.0565966,-0.079424724,1.0565966,"down","RABL3",285282,"0007264 // small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr3:120405529-120461384 (-) // 75.98 // q13.33"]
["11744276_a_at",0.014029503,-0.12075138,-0.16759205,0.037776947,-0.014029503,0.052957535,0.38883758,0.11426429,-1.0844822,-0.11700636,1.0844822,"down","CAPG",822,"0006461 // protein complex assembly // non-traceable author statement /// 0030031 // cell projection assembly // inferred from electronic annotation /// 0051016 // barbed-end actin filament capping // traceable author statement /// 0051693 // actin filament capping // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008290 // F-actin capping protein complex // traceable author statement /// 0031965 // nuclear membrane // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation","chr2:85621889-85637820 (-) // 95.71 // p11.2"]
["11725525_at",0.01478672,-0.01478672,-0.039121628,0.16837883,-0.06234646,0.04641819,0.7049446,0.4036145,-1.0452567,-0.06385734,1.0452567,"down","DSG2",1829,"0006915 // apoptotic process // inferred from direct assay /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0007155 // cell adhesion // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0097194 // execution phase of apoptosis // inferred from direct assay","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030057 // desmosome // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr18:29078026-29128971 (+) // 90.77 // q12.1"]
["11754578_x_at",0.09826517,0.09826517,-0.17083073,-0.0228796,-0.09253621,0.022879839,0.88249576,0.7017802,1.0276948,0.039411914,1.0276948,"up","C1orf101",257044,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:244624712-244803658 (+) // 98.35 // q44"]
["11743509_a_at",0.115615845,-0.14670372,-0.11193991,0.028591156,0.038714886,-0.028591156,0.78131104,0.5148633,-1.0428855,-0.060580827,1.0428855,"down","UFL1",23376,"0031397 // negative regulation of protein ubiquitination // inferred from direct assay /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0071569 // protein ufmylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0016874 // ligase activity // inferred from electronic annotation /// 0071568 // UFM1 conjugating enzyme activity // inferred from direct assay","chr6:96969683-97003280 (+) // 97.56 // q16.1"]
["11733446_at",0.09472704,0.09794426,0.16492414,-0.09472704,-0.10217619,-0.11924982,0.035884835,0.0007269489,1.1684393,0.22458275,1.1684393,"up","MMS22L",253714,"0000724 // double-strand break repair via homologous recombination // inferred from mutant phenotype /// 0006281 // DNA repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0031297 // replication fork processing // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0035101 // FACT complex // inferred from direct assay /// 0042555 // MCM complex // inferred from direct assay /// 0043596 // nuclear replication fork // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr6:97590036-97731052 (-) // 90.35 // q16.1"]
["11715135_s_at",0.10244179,0.06222868,0.11713028,-0.25877094,-0.07589865,-0.06222868,0.18477026,0.02589763,1.1697766,0.22623298,1.1697766,"up","SNAPC5",10302,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0006384 // transcription initiation from RNA polymerase III promoter // traceable author statement /// 0010467 // gene expression // traceable author statement","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement","chr15:66782665-66790146 (-) // 86.11 // q22.31"]
["11717627_a_at",-0.016870499,0.12098408,0.21208191,-0.27326107,-0.021780014,0.016870499,0.45019054,0.15359019,1.147204,0.19812201,1.147204,"up","BIRC2",329,"0000209 // protein polyubiquitination // inferred from direct assay /// 0001890 // placenta development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0034121 // regulation of toll-like receptor signaling pathway // traceable author statement /// 0038061 // NIK/NF-kappaB cascade // traceable author statement /// 0039535 // regulation of RIG-I signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation // traceable author statement /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0045088 // regulation of innate immune response // traceable author statement /// 0045595 // regulation of cell differentiation // traceable author statement /// 0050727 // regulation of inflammatory response // traceable author statement /// 0051726 // regulation of cell cycle // inferred from direct assay /// 0070266 // necroptosis // inferred from electronic annotation /// 0070424 // regulation of nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement /// 2000116 // regulation of cysteine-type endopeptidase activity // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0009898 // internal side of plasma membrane // inferred from sequence or structural similarity /// 0009898 // internal side of plasma membrane // inferred from electronic annotation /// 0035631 // CD40 receptor complex // inferred from sequence or structural similarity /// 0035631 // CD40 receptor complex // inferred from electronic annotation","0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction","chr11:102217663-102249401 (+) // 98.92 // q22.2"]
["11725602_at",0.17750454,0.20340729,0.26062202,-0.19942856,-0.17750454,-0.3368473,0.044596665,0.0012462339,1.3677186,0.4517714,1.3677186,"up","DENND5B",160518,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:31535160-31743952 (-) // 84.17 // p11.21"]
["11726073_a_at",-0.11602974,0.19061685,-0.024541616,0.024541616,-0.11273646,0.37720275,0.86534035,0.6672029,-1.0567647,-0.07965421,1.0567647,"down","ARHGEF7",8874,"0006915 // apoptotic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043547 // positive regulation of GTPase activity // inferred from direct assay /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0001726 // ruffle // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005925 // focal adhesion // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from direct assay /// 0043025 // neuronal cell body // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay","0005085 // guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction","chr13:111767623-111947542 (+) // 96.56 // q34"]
["11752066_a_at",-0.2024684,-0.056090355,0.0019712448,0.019144535,-0.0019712448,0.13924408,0.4310886,0.14054482,-1.1001257,-0.13766834,1.1001257,"down","RAI1",10743,"0001501 // skeletal system development // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0040015 // negative regulation of multicellular organism growth // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:17685445-17714717 (+) // 95.66 // p11.2"]
["11755284_s_at",0.031017303,-0.011343956,0.034059525,0.011343956,-0.071261406,-0.15204334,0.4418556,0.14741044,1.0633117,0.08856457,1.0633117,"up","TSPAN13",27075,"","0005624 // membrane fraction // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr7:16793327-16824105 (+) // 98.02 // p21.1"]
["11730070_at",0.056876183,0.0947299,-0.041661263,-0.08996391,0.030148745,-0.030148745,0.6004849,0.28037217,1.0472721,0.06663631,1.0472721,"up","KIAA1239",57495,"","","","chr4:37246689-37451081 (+) // 97.41 // p14"]
["11725271_a_at",0.16856766,0.12205124,0.13374996,-0.13055182,-0.122051716,-0.24859285,0.055918876,0.0020264154,1.2384381,0.30852178,1.2384381,"up","PIGA",5277,"0006501 // C-terminal protein lipidation // traceable author statement /// 0006506 // GPI anchor biosynthetic process // traceable author statement /// 0006506 // GPI anchor biosynthetic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009893 // positive regulation of metabolic process // traceable author statement /// 0016254 // preassembly of GPI anchor in ER membrane // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0000506 // glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008194 // UDP-glycosyltransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0017176 // phosphatidylinositol N-acetylglucosaminyltransferase activity // traceable author statement /// 0017176 // phosphatidylinositol N-acetylglucosaminyltransferase activity // inferred from electronic annotation","chrX:15337577-15350115 (-) // 97.53 // p22.2"]
["11756973_a_at",-0.0025491714,0.09903097,0.051919937,0.0025486946,-0.04734993,-0.06332207,0.31037816,0.073254146,1.0610615,0.08550828,1.0610615,"up","RAD18",56852,"0006281 // DNA repair // non-traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0009411 // response to UV // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0045910 // negative regulation of DNA recombination // inferred from electronic annotation","0000785 // chromatin // inferred from electronic annotation /// 0001741 // XY body // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005657 // replication fork // inferred from direct assay","0000403 // Y-form DNA binding // inferred from direct assay /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:8922947-9005115 (-) // 100.0 // p25.3"]
["11720565_a_at",0.3428259,0.005765915,0.10880375,-0.005765915,-0.16134167,-0.3958397,0.34008533,0.087391496,1.2658569,0.34011427,1.2658569,"up","NAV2",89797,"","0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr11:19734880-20143147 (+) // 98.11 // p15.1"]
["11754979_x_at",0.078437805,0.051223755,0.07376003,-0.0722208,-0.052479744,-0.051223755,0.026285475,0.0003051931,1.0916033,0.12644863,1.0916033,"up","ARIH2",10425,"0000209 // protein polyubiquitination // inferred from direct assay /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0048588 // developmental cell growth // inferred from direct assay /// 0070534 // protein K63-linked ubiquitination // inferred from direct assay /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay /// 0071425 // hemopoietic stem cell proliferation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:48963947-49021112 (+) // 87.83 // p21.31"]
["11728223_at",-0.047388077,-0.013370037,0.04319668,0.20000553,-0.113256454,0.013370037,0.8815458,0.7000789,-1.027563,-0.039226815,1.027563,"down","UBE2J1",51465,"0016567 // protein ubiquitination // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation","chr6:90036194-90062615 (-) // 92.57 // q15"]
["11732498_at",-0.0033369064,-0.21920443,0.021816254,0.4355154,-0.06357145,0.0033369064,0.64875716,0.33201817,-1.1423478,-0.19200197,1.1423478,"down","HCN2",610,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // traceable author statement /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007420 // brain development // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0035725 // sodium ion transmembrane transport // inferred from electronic annotation /// 0042391 // regulation of membrane potential // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0045823 // positive regulation of heart contraction // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008076 // voltage-gated potassium channel complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043198 // dendritic shaft // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005249 // voltage-gated potassium channel activity // inferred from electronic annotation /// 0005261 // cation channel activity // traceable author statement /// 0005267 // potassium channel activity // inferred from electronic annotation /// 0005272 // sodium channel activity // inferred from electronic annotation /// 0030552 // cAMP binding // inferred from electronic annotation /// 0032947 // protein complex scaffold // inferred from electronic annotation","chr19:589892-617159 (+) // 77.3 // p13.3"]
["11763137_at",0.041731358,-0.24198222,-0.008337021,0.1860869,0.008337021,-0.038053513,0.65081733,0.33445382,-1.0879805,-0.12165271,1.0879805,"down","HSP90AA6P",441051,"0006457 // protein folding // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation","","0005524 // ATP binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr4:171525947-171526135 (-) // 61.44 // q33"]
["11717551_a_at",0.06463432,-0.030158997,-0.12454939,0.085609436,-0.2409544,0.030158997,0.9730577,0.9236513,1.0081456,0.011703971,1.0081456,"up","LOXL1",4016,"0018277 // protein deamination // traceable author statement /// 0055114 // oxidation-reduction process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from electronic annotation","0005507 // copper ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016641 // oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:74218510-74244477 (+) // 95.99 // q24.1"]
["11750148_a_at",0.083483696,0.025082588,-0.25258207,-0.16649294,-0.025082588,0.09622002,0.96616364,0.9056364,-1.0113064,-0.016220171,1.0113064,"down","SNED1",25992,"0007160 // cell-matrix adhesion // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr2:242002794-242026875 (+) // 95.87 // q37.3"]
["11756759_a_at",-0.11230612,0.08343744,0.029202938,-0.1063447,0.10023403,-0.029202938,0.962677,0.8942018,1.0082704,0.011882571,1.0082704,"up","IFT172",26160,"0001841 // neural tube formation // inferred from electronic annotation /// 0007224 // smoothened signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0009953 // dorsal/ventral pattern formation // inferred from electronic annotation /// 0016485 // protein processing // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from sequence or structural similarity /// 0042384 // cilium assembly // inferred from electronic annotation","0005929 // cilium // inferred from sequence or structural similarity /// 0005929 // cilium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","","chr2:27693679-27712545 (-) // 97.87 // p23.3"]
["11753037_x_at",0.013104439,0.24959278,-0.02923417,-0.105942726,-0.013104439,0.24122286,0.924228,0.79746157,1.0260463,0.0370958,1.0260463,"up","ANKS1B",56899,"","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0015030 // Cajal body // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0046875 // ephrin receptor binding // inferred from physical interaction","chr12:99139516-99548270 (-) // 100.0 // q23.1"]
["11739263_x_at",-0.33070087,-0.14477158,0.046525,0.097252846,-0.046525,0.21349621,0.45323685,0.15575859,-1.1736947,-0.23105721,1.1736947,"down","VPS4B",9525,"0006200 // ATP catabolic process // inferred from direct assay /// 0006200 // ATP catabolic process // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0007032 // endosome organization // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0016197 // endosomal transport // inferred from direct assay /// 0016197 // endosomal transport // inferred from mutant phenotype /// 0016197 // endosomal transport // traceable author statement /// 0030301 // cholesterol transport // inferred from electronic annotation /// 0032367 // intracellular cholesterol transport // inferred from mutant phenotype /// 0032510 // endosome to lysosome transport via multivesicular body sorting pathway // inferred from mutant phenotype /// 0033993 // response to lipid // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation","0005622 // intracellular // inferred from mutant phenotype /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005770 // late endosome // inferred from direct assay /// 0005774 // vacuolar membrane // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from mutant phenotype /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0016887 // ATPase activity // inferred from direct assay /// 0016887 // ATPase activity // inferred from mutant phenotype /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042623 // ATPase activity, coupled // non-traceable author statement","chr18:61056426-61089752 (-) // 89.46 // q21.33"]
["11741460_s_at",-0.20276928,0.024596214,0.04757881,-0.024596214,-0.033323765,0.16423035,0.7611572,0.48461652,-1.0562624,-0.07896824,1.0562624,"down","CYP4A11",1579,"0001676 // long-chain fatty acid metabolic process // inferred from direct assay /// 0003091 // renal water homeostasis // inferred from expression pattern /// 0003095 // pressure natriuresis // inferred from expression pattern /// 0006631 // fatty acid metabolic process // traceable author statement /// 0006691 // leukotriene metabolic process // inferred from direct assay /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0019369 // arachidonic acid metabolic process // inferred from direct assay /// 0019373 // epoxygenase P450 pathway // inferred from direct assay /// 0032305 // positive regulation of icosanoid secretion // inferred from mutant phenotype /// 0036101 // leukotriene B4 catabolic process // inferred from direct assay /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055078 // sodium ion homeostasis // inferred from expression pattern /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from direct assay /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from direct assay","0004497 // monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0008392 // arachidonic acid epoxygenase activity // inferred from direct assay /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0018685 // alkane 1-monooxygenase activity // inferred from direct assay /// 0018685 // alkane 1-monooxygenase activity // inferred from electronic annotation /// 0018685 // alkane 1-monooxygenase activity // traceable author statement /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050051 // leukotriene-B4 20-monooxygenase activity // inferred from direct assay /// 0052869 // arachidonic acid omega-hydroxylase activity // inferred from electronic annotation","chr1:47603096-47615407 (+) // 66.27 // p33 /// chr1:47394851-47407166 (-) // 64.36 // p33"]
["11733205_a_at",0.31608725,0.0099003315,-0.009631634,0.009631634,-0.061787367,-0.009840727,0.6255064,0.3062077,1.0913527,0.12611742,1.0913527,"up","AFAP1L1",134265,"","0002102 // podosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0071437 // invadopodium // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation","chr5:148651400-148721365 (+) // 86.7 // q32"]
["11757944_s_at",0.013000488,-0.092056274,-0.13869238,0.3914795,0.096001625,-0.013000965,0.4425401,0.14790499,-1.1734389,-0.23074272,1.1734389,"down","SMCR7L",54471,"0008053 // mitochondrial fusion // inferred from mutant phenotype","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr22:39913105-39914138 (+) // 96.72 // q13.1"]
["11725485_at",-0.08832359,0.22032213,0.363163,-0.015503883,0.015503883,-0.034745693,0.5775446,0.25795707,1.1302452,0.1766358,1.1302452,"up","DIRC2",84925,"0006810 // transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:122513641-122600032 (+) // 96.32 // q21.1"]
["11745889_a_at",0.08859205,0.059688568,-0.059689045,0.20120907,-0.06567526,-0.2136221,0.8768958,0.6901904,1.0392624,0.05555998,1.0392624,"up","KIDINS220",57498,"0000186 // activation of MAPKK activity // traceable author statement /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048813 // dendrite morphogenesis // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016301 // kinase activity // inferred from electronic annotation","chr2:8869058-8911309 (-) // 98.17 // p25.1"]
["11727900_at",0.52095675,0.2568624,0.22276807,-0.28639865,-0.22276807,-0.2870059,0.07056723,0.0034430008,1.5145823,0.5989199,1.5145823,"up","DMRT1",1761,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0002176 // male germ cell proliferation // inferred from sequence or structural similarity /// 0003006 // developmental process involved in reproduction // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007530 // sex determination // traceable author statement /// 0007548 // sex differentiation // inferred from electronic annotation /// 0008354 // germ cell migration // inferred from electronic annotation /// 0008584 // male gonad development // traceable author statement /// 0008584 // male gonad development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030238 // male sex determination // inferred from sequence or structural similarity /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0045835 // negative regulation of meiosis // inferred from sequence or structural similarity /// 0045840 // positive regulation of mitosis // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0046661 // male sex differentiation // inferred from sequence or structural similarity /// 0060008 // Sertoli cell differentiation // inferred from sequence or structural similarity /// 0060008 // Sertoli cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation","0000987 // core promoter proximal region sequence-specific DNA binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:841644-969090 (+) // 96.33 // p24.3"]
["11721878_x_at",-0.3776908,0.037395954,-0.013866901,-0.21643686,0.013866901,0.18508577,0.8056284,0.556103,-1.0808946,-0.11222584,1.0808946,"down","MT1F",4494,"0045926 // negative regulation of growth // inferred from sequence or structural similarity /// 0071276 // cellular response to cadmium ion // inferred from expression pattern /// 0071294 // cellular response to zinc ion // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity","0005507 // copper ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from sequence or structural similarity /// 0008270 // zinc ion binding // non-traceable author statement /// 0046870 // cadmium ion binding // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:56691605-56693473 (+) // 84.83 // q12.2"]
["11738309_at",0.073269606,-0.12860703,0.07559776,-0.07326937,-0.15573406,0.25854492,0.9942662,0.98383945,-1.0021467,-0.003093744,1.0021467,"down","SHANK2",22941,"0007420 // brain development // inferred from electronic annotation /// 0035556 // intracellular signal transduction // non-traceable author statement","0005622 // intracellular // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008328 // ionotropic glutamate receptor complex // inferred from sequence or structural similarity /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from sequence or structural similarity /// 0030054 // cell junction // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from sequence or structural similarity /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from sequence or structural similarity /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0060170 // cilium membrane // inferred from sequence or structural similarity","0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0030160 // GKAP/Homer scaffold activity // non-traceable author statement /// 0035255 // ionotropic glutamate receptor binding // inferred from sequence or structural similarity","chr11:70335117-70507945 (-) // 99.53 // q13.3"]
["11725638_a_at",-0.12277126,-0.012581825,-0.07841015,0.012581825,0.1449337,0.07836342,0.22830625,0.039666448,-1.1094778,-0.14988074,1.1094778,"down","EIF3J",8669,"0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred by curator /// 0006413 // translational initiation // traceable author statement /// 0006413 // translational initiation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from direct assay","0003743 // translation initiation factor activity // inferred by curator /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr15:44829254-44855001 (+) // 91.33 // q21.1"]
["11736969_at",0.19004059,0.15518045,0.02315569,-0.18555307,-0.02315569,-0.16508627,0.1869759,0.026444247,1.1870581,0.24739054,1.1870581,"up","TMEM213",155006,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr7:138482696-138490767 (+) // 77.55 // q34"]
["11751415_a_at",-0.04796219,-0.089484215,-0.031352997,0.09616947,0.08985615,0.031352997,0.108910136,0.0087622,-1.0933278,-0.12872596,1.0933278,"down","TSC22D3",1831,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006970 // response to osmotic stress // inferred from electronic annotation /// 0007589 // body fluid secretion // inferred from electronic annotation /// 0048642 // negative regulation of skeletal muscle tissue development // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0043426 // MRF binding // inferred from electronic annotation","chrX:106957213-107018890 (-) // 99.77 // q22.3"]
["11751724_a_at",-0.062084436,-0.035646915,0.18158507,-0.20246601,0.035646915,0.10870743,0.88930136,0.71697235,1.0333449,0.047321815,1.0333449,"up","ZNF542",147947,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:56879507-56888735 (+) // 92.38 // q13.43"]
["11733871_a_at",-0.24723053,-0.069999695,-0.08580971,0.14433861,0.08047104,0.069999695,0.15854903,0.019095216,-1.174964,-0.23261648,1.174964,"down","LOC100652805 /// LOC100653302 /// PGK1","100652805 /// 100653302 /// 5230","0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006096 // glycolysis // inferred from electronic annotation /// 0006096 // glycolysis // traceable author statement /// 0016310 // phosphorylation // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004618 // phosphoglycerate kinase activity // not recorded /// 0004618 // phosphoglycerate kinase activity // inferred from sequence or structural similarity /// 0004618 // phosphoglycerate kinase activity // inferred from electronic annotation /// 0004618 // phosphoglycerate kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chrX:77359665-77382323 (+) // 82.0 // q21.1"]
["11753344_a_at",0.052434206,0.10799956,0.0010175705,-0.09553361,-0.102332115,-0.0010173321,0.2709299,0.055793077,1.0868188,0.12011144,1.0868188,"up","LINC00340",401237,"","","","chr6:21666645-21979247 (+) // 99.69 // p22.3"]
["11760948_at",-0.10096121,-0.027741909,0.027741909,-0.40693092,0.14576006,0.17399454,0.993385,0.98212284,-1.00319,-0.0045949304,1.00319,"down","ANAPC2",29882,"0000075 // cell cycle checkpoint // traceable author statement /// 0000079 // regulation of cyclin-dependent protein kinase activity // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007094 // mitotic cell cycle spindle assembly checkpoint // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0008054 // cyclin catabolic process // traceable author statement /// 0016567 // protein ubiquitination // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0031915 // positive regulation of synaptic plasticity // inferred from sequence or structural similarity /// 0031915 // positive regulation of synaptic plasticity // inferred from electronic annotation /// 0045773 // positive regulation of axon extension // inferred from electronic annotation /// 0050775 // positive regulation of dendrite morphogenesis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay /// 0090129 // positive regulation of synapse maturation // inferred from sequence or structural similarity /// 0090129 // positive regulation of synapse maturation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005680 // anaphase-promoting complex // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0031461 // cullin-RING ubiquitin ligase complex // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // traceable author statement /// 0031625 // ubiquitin protein ligase binding // inferred from electronic annotation","chr9:140080909-140083004 (-) // 94.58 // q34.3"]
["11754580_s_at",0.32645416,0.10434675,0.08018637,-0.08018637,-0.09706211,-0.2097702,0.19050921,0.02753021,1.2305773,0.29933533,1.2305773,"up","CCDC92",80212,"","","","chr12:124420955-124424205 (-) // 93.15 // q24.31"]
["11743717_at",-0.20438147,-0.09233284,0.28059196,0.025266647,0.31654167,-0.025266647,0.81551456,0.5736531,-1.0798928,-0.11088804,1.0798928,"down","SMTNL1",219537,"0014823 // response to activity // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0045907 // positive regulation of vasoconstriction // inferred from sequence or structural similarity /// 0045907 // positive regulation of vasoconstriction // inferred from electronic annotation /// 0045908 // negative regulation of vasodilation // inferred from sequence or structural similarity /// 0045908 // negative regulation of vasodilation // inferred from electronic annotation /// 0048644 // muscle organ morphogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030016 // myofibril // inferred from electronic annotation /// 0031430 // M band // inferred from electronic annotation /// 0031674 // I band // inferred from electronic annotation /// 0043292 // contractile fiber // inferred from direct assay /// 0043292 // contractile fiber // inferred from electronic annotation","0005516 // calmodulin binding // inferred from electronic annotation /// 0008157 // protein phosphatase 1 binding // inferred from electronic annotation","chr11:57308978-57318408 (+) // 91.92 // q12.1"]
["11747282_x_at",-0.009237289,0.009236336,0.026101112,-0.044298172,0.0505085,-0.03877163,0.8183223,0.57841694,1.0136459,0.019553741,1.0136459,"up","ANXA2 /// ANXA2P2","302 /// 304","0001501 // skeletal system development // traceable author statement /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001525 // angiogenesis // inferred from expression pattern /// 0007589 // body fluid secretion // inferred from electronic annotation /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0031340 // positive regulation of vesicle fusion // inferred from direct assay /// 0042730 // fibrinolysis // inferred from electronic annotation /// 0051099 // positive regulation of binding // inferred from electronic annotation /// 0071229 // cellular response to acid // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005625 // soluble fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005811 // lipid particle // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0019897 // extrinsic to plasma membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0035749 // myelin sheath adaxonal region // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043220 // Schmidt-Lanterman incisure // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0004859 // phospholipase inhibitor activity // inferred from electronic annotation /// 0004859 // phospholipase inhibitor activity // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005544 // calcium-dependent phospholipid binding // inferred from electronic annotation /// 0005544 // calcium-dependent phospholipid binding // inferred from direct assay /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from electronic annotation /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from electronic annotation","chr15:60639762-60690185 (-) // 76.7 // q22.2"]
["11747930_x_at",0.1327753,0.08528805,0.15750694,-0.12999773,-0.16763687,-0.08528805,0.047096405,0.0013663154,1.191543,0.25283098,1.191543,"up","UBAP1",51271,"","0005737 // cytoplasm // inferred from direct assay","","chr9:34179039-34252052 (+) // 99.1 // p13.3"]
["11743092_at",0.03736067,-0.21405649,-0.21585178,0.4153695,0.3370924,-0.03736067,0.33796492,0.08627934,-1.291651,-0.36921632,1.291651,"down","THEM4",117145,"0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","","chr1:151846064-151882284 (-) // 68.5 // q21.3"]
["11724376_at",-0.054866314,-0.005824089,0.061427116,-0.27160454,0.005824089,0.24255848,0.9866047,0.960709,1.005551,0.007986227,1.005551,"up","PAG1",55824,"0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0050863 // regulation of T cell activation // inferred from direct assay /// 0050868 // negative regulation of T cell activation // inferred from electronic annotation","0005622 // intracellular // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay","0005070 // SH3/SH2 adaptor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042169 // SH2 domain binding // inferred from direct assay","chr8:81880044-82024303 (-) // 93.69 // q21.13"]
["11746987_a_at",-0.028433323,0.012980223,0.12043691,0.06465125,-0.012980223,-0.028524399,0.8483018,0.63328534,1.0190883,0.027279016,1.0190883,"up","ADAM2",2515,"0006508 // proteolysis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007342 // fusion of sperm to egg plasma membrane // traceable author statement /// 0008542 // visual learning // inferred from electronic annotation /// 0030534 // adult behavior // inferred from electronic annotation","0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0005178 // integrin binding // traceable author statement /// 0008237 // metallopeptidase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation","chr8:39601256-39695728 (-) // 99.18 // p11.22"]
["11738814_a_at",-0.36914277,-0.0030884743,-0.13248444,0.024331093,0.0030884743,0.11887121,0.41008934,0.12703264,-1.1623158,-0.21700215,1.1623158,"down","NFATC2",4773,"0001816 // cytokine production // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from mutant phenotype /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0030890 // positive regulation of B cell proliferation // inferred from mutant phenotype /// 0042493 // response to drug // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0050853 // B cell receptor signaling pathway // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation","chr20:50007764-50179168 (-) // 100.0 // q13.2"]
["11761983_at",-0.26011014,0.060317278,-0.060317516,0.085030556,-0.23468947,0.29149604,0.7691576,0.49651036,-1.0973186,-0.13398252,1.0973186,"down","IQCF1",132141,"","","","chr3:51842522-51937384 (-) // 32.45 // p21.2"]
["11741349_at",-0.1659205,-0.009881973,0.009881973,0.1638627,-0.010789871,0.07843518,0.44849077,0.15232979,-1.0961735,-0.1324762,1.0961735,"down","SLFN12L",100506736,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005524 // ATP binding // inferred from electronic annotation","chr17:33801921-33864880 (-) // 93.36 // q12"]
["11739320_x_at",-0.15616512,-0.09691048,0.050878525,0.038588524,0.088005066,-0.038588524,0.5681257,0.24883159,-1.0693499,-0.09673397,1.0693499,"down","ATG12",9140,"0000045 // autophagic vacuole assembly // inferred from sequence or structural similarity /// 0000045 // autophagic vacuole assembly // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0045087 // innate immune response // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0034045 // pre-autophagosomal structure membrane // inferred from sequence or structural similarity","0005515 // protein binding // inferred from physical interaction","chr5:115165814-115177555 (-) // 79.22 // q22.3"]
["11736079_a_at",0.437325,0.07595682,-0.049960613,0.049960613,-0.22774172,-0.3553753,0.44975662,0.15333337,1.2588961,0.33215922,1.2588961,"up","NEK9",91754,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:75548728-75593778 (-) // 99.18 // q24.3"]
["11749559_x_at",-0.019888878,0.019888878,-0.039940834,-0.14983225,0.19959307,0.10382652,0.8160973,0.5746964,-1.0457293,-0.064509414,1.0457293,"down","CYP4F8",11283,"0006690 // icosanoid metabolic process // traceable author statement /// 0006693 // prostaglandin metabolic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004497 // monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0018685 // alkane 1-monooxygenase activity // traceable author statement /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070330 // aromatase activity // inferred from electronic annotation","chr19:15726028-15740167 (+) // 99.21 // p13.12"]
["11727496_x_at",-0.041630745,-0.21191406,-0.12818336,0.16836643,0.09649086,0.041630745,0.16280103,0.020127442,-1.1723517,-0.22940546,1.1723517,"down","C17orf76-AS1 /// SNORD49A /// SNORD49B /// SNORD65","125144 /// 26800 /// 692087 /// 692106","","0005739 // mitochondrion // inferred from electronic annotation","","chr17:16342170-16345332 (+) // 78.66 // p11.2"]
["11745727_a_at",0.20293379,0.032591343,-0.032591343,0.14722395,-0.19290829,-0.101184845,0.70138365,0.3985641,1.0841775,0.11660096,1.0841775,"up","TCF12",6938,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006955 // immune response // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007517 // muscle organ development // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0070888 // E-box binding // inferred from electronic annotation","chr15:57210486-57580712 (+) // 99.14 // q21.3"]
["11718720_a_at",-0.10370827,0.009202957,0.028705597,-0.009202957,0.04063034,-0.07981968,0.9716874,0.91971976,-1.0040301,-0.0058025327,1.0040301,"down","BRD8",10902,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0040008 // regulation of growth // inferred from electronic annotation /// 0043967 // histone H4 acetylation // inferred from direct assay /// 0043968 // histone H2A acetylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0035267 // NuA4 histone acetyltransferase complex // inferred from direct assay","0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0004887 // thyroid hormone receptor activity // traceable author statement","chr5:137492572-137514358 (-) // 99.23 // q31.2"]
["11762316_at",0.003927231,-0.14320445,0.039420843,-0.31232214,-0.003927231,0.15142465,0.96147954,0.89022994,1.0151241,0.021656085,1.0151241,"up","GLYATL1",92292,"","0005739 // mitochondrion // inferred from electronic annotation","0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0047961 // glycine N-acyltransferase activity // inferred from electronic annotation","chr11:58714516-58723133 (+) // 64.21 // q12.1"]
["11733733_a_at",0.10404587,-0.027163506,0.02037239,0.033040047,-0.02037239,-0.26803207,0.62573016,0.3065452,1.0848832,0.11753974,1.0848832,"up","DPH5",51611,"0008152 // metabolic process // inferred from electronic annotation /// 0017183 // peptidyl-diphthamide biosynthetic process from peptidyl-histidine // inferred from electronic annotation /// 0017183 // peptidyl-diphthamide biosynthetic process from peptidyl-histidine // non-traceable author statement /// 0032259 // methylation // inferred from electronic annotation","","0004164 // diphthine synthase activity // inferred from electronic annotation /// 0004164 // diphthine synthase activity // non-traceable author statement /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr1:101455182-101491363 (-) // 79.53 // p21.2"]
["11757240_x_at",0.116671085,0.124503136,0.029932976,-0.17013264,-0.029932976,-0.10810375,0.15775812,0.01887955,1.1432114,0.19309217,1.1432114,"up","LOC100130557",100130557,"","","","chr1:41154801-41157933 (-) // 62.19 // p34.2"]
["11737662_a_at",-0.24466944,-0.01999116,0.01999116,-0.0899868,0.098808765,0.20071411,0.58980036,0.27040428,-1.1106482,-0.15140185,1.1106482,"down","TET2",54790,"0001822 // kidney development // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0030099 // myeloid cell differentiation // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from electronic annotation","","0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070579 // methylcytosine dioxygenase activity // inferred from mutant phenotype /// 0070579 // methylcytosine dioxygenase activity // inferred from sequence or structural similarity","chr4:106067942-106163928 (+) // 74.01 // q24"]
["11757322_a_at",0.04554653,0.103637695,0.035542488,-0.13193226,-0.035542488,-0.07889366,0.14042236,0.014835044,1.1047335,0.14369833,1.1047335,"up","HAUS7",55559,"0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0051225 // spindle assembly // inferred from mutant phenotype /// 0051297 // centrosome organization // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0000502 // proteasome complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0070652 // HAUS complex // inferred from direct assay","0031996 // thioesterase binding // inferred from physical interaction /// 0031996 // thioesterase binding // inferred from sequence or structural similarity","chrX:152713127-152722011 (-) // 95.68 // q28"]
["11743604_s_at",0.0038728714,0.017342567,-0.0038728714,0.1882143,-0.08583546,-0.13201809,0.95905596,0.8832945,1.0109142,0.015660565,1.0109142,"up","RRM1",6240,"0006260 // DNA replication // inferred from electronic annotation /// 0006260 // DNA replication // non-traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009263 // deoxyribonucleotide biosynthetic process // inferred from sequence or structural similarity /// 0009263 // deoxyribonucleotide biosynthetic process // inferred from electronic annotation /// 0015949 // nucleobase-containing small molecule interconversion // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051259 // protein oligomerization // inferred from electronic annotation /// 0051290 // protein heterotetramerization // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005971 // ribonucleoside-diphosphate reductase complex // non-traceable author statement /// 0005971 // ribonucleoside-diphosphate reductase complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004748 // ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor // inferred from sequence or structural similarity /// 0004748 // ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor // non-traceable author statement /// 0004748 // ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0017076 // purine nucleotide binding // inferred from electronic annotation","chr11:4115594-4160106 (+) // 94.08 // p15.4"]
["11761961_s_at",0.097681046,-0.09814024,0.011842728,0.14747,-0.15407515,-0.011842728,0.9747683,0.9283643,1.0069163,0.009943742,1.0069163,"up","MT1DP",326343,"","","0046872 // metal ion binding // inferred from electronic annotation","chr16:56677598-56679158 (+) // 87.36 // q12.2"]
["11738054_a_at",-0.065340996,0.07007122,-0.025582314,-0.24137712,0.025582314,0.13082027,0.9513179,0.86488396,1.0149257,0.021374142,1.0149257,"up","ITGB1BP2",26548,"0007165 // signal transduction // traceable author statement /// 0007517 // muscle organ development // traceable author statement","0030018 // Z disc // inferred from electronic annotation","0005178 // integrin binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:70521583-70525220 (+) // 98.4 // q13.1"]
["11726142_a_at",-0.009530544,0.009530544,0.031676292,-0.04248357,-0.062894344,0.034097433,0.6571992,0.34167174,1.0240732,0.0343189,1.0240732,"up","FMN2",56776,"0007132 // meiotic metaphase I // inferred from sequence or structural similarity /// 0007132 // meiotic metaphase I // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016043 // cellular component organization // inferred from electronic annotation /// 0016344 // meiotic chromosome movement towards spindle pole // inferred from sequence or structural similarity /// 0016344 // meiotic chromosome movement towards spindle pole // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0040038 // polar body extrusion after meiotic divisions // inferred from sequence or structural similarity /// 0040038 // polar body extrusion after meiotic divisions // inferred from electronic annotation /// 0048477 // oogenesis // inferred from sequence or structural similarity /// 0048477 // oogenesis // inferred from electronic annotation /// 0051295 // establishment of meiotic spindle localization // inferred from sequence or structural similarity /// 0051295 // establishment of meiotic spindle localization // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation","chr1:240255184-240638489 (+) // 98.08 // q43"]
["11729374_at",0.031901836,0.35711718,0.3800497,-0.37926674,-0.29615068,-0.031901836,0.208166,0.032802895,1.4065193,0.49212933,1.4065193,"up","KRT34 /// LOC100653049","100653049 /// 3885","0008544 // epidermis development // traceable author statement","0005882 // intermediate filament // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0005198 // structural molecule activity // non-traceable author statement","chr17:39533916-39538655 (-) // 97.42 // q21.2"]
["11735500_a_at",-0.025048733,-0.114856005,-0.15259147,0.07627797,0.025048494,0.09136152,0.16038749,0.019489268,-1.1186262,-0.16172807,1.1186262,"down","BTN1A1",696,"","0005576 // extracellular region // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // traceable author statement","chr6:26501455-26510650 (+) // 98.36 // p22.2"]
["11726743_at",-0.13051367,-0.22044253,0.21840906,0.008743286,-0.008743286,0.3161893,0.7236374,0.42968488,-1.1092455,-0.14957875,1.1092455,"down","F2RL2",2151,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0007596 // blood coagulation // inferred from electronic annotation /// 0007599 // hemostasis // inferred from electronic annotation /// 0009611 // response to wounding // traceable author statement /// 0009611 // response to wounding // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0070493 // thrombin receptor signaling pathway // traceable author statement /// 0070493 // thrombin receptor signaling pathway // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation","0004435 // phosphatidylinositol phospholipase C activity // traceable author statement /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015057 // thrombin receptor activity // inferred from electronic annotation /// 0015057 // thrombin receptor activity // traceable author statement","chr5:75911307-75919259 (-) // 76.68 // q13.3"]
["11744619_a_at",0.21069622,0.0012512207,0.08761692,-0.0012512207,-0.08158302,-0.20674801,0.33045128,0.08261661,1.1458215,0.19638225,1.1458215,"up","SNX24",28966,"0006810 // transport // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0008289 // lipid binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr5:122181307-122337840 (+) // 90.72 // q23.2"]
["11729293_a_at",0.25893116,-0.13071012,0.018575191,0.008415699,-0.024473667,-0.008415699,0.8531433,0.64252615,1.0403651,0.057089906,1.0403651,"up","SPPL2B",56928,"0006508 // proteolysis // inferred from electronic annotation /// 0006509 // membrane protein ectodomain proteolysis // inferred from direct assay /// 0031293 // membrane protein intracellular domain proteolysis // inferred from direct assay /// 0031293 // membrane protein intracellular domain proteolysis // inferred from mutant phenotype /// 0050776 // regulation of immune response // inferred from mutant phenotype","0000139 // Golgi membrane // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0010008 // endosome membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030660 // Golgi-associated vesicle membrane // inferred from direct assay /// 0071458 // integral to cytosolic side of endoplasmic reticulum membrane // inferred from direct assay /// 0071556 // integral to lumenal side of endoplasmic reticulum membrane // inferred from direct assay","0004190 // aspartic-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042500 // aspartic endopeptidase activity, intramembrane cleaving // inferred from mutant phenotype /// 0042803 // protein homodimerization activity // inferred from direct assay","chr19:2328628-2355099 (+) // 95.76 // p13.3"]
["11754784_x_at",0.090518,0.016036987,0.0103702545,-0.10860205,-0.0103702545,-0.105327606,0.2599287,0.0511097,1.0820309,0.11374169,1.0820309,"up","KIAA0895L",653319,"0006887 // exocytosis // inferred from electronic annotation /// 0006887 // exocytosis // inferred from sequence or structural similarity /// 0030072 // peptide hormone secretion // inferred from electronic annotation /// 0030072 // peptide hormone secretion // inferred from sequence or structural similarity","0000145 // exocyst // inferred from electronic annotation /// 0000145 // exocyst // inferred from sequence or structural similarity /// 0030133 // transport vesicle // inferred from electronic annotation /// 0030141 // secretory granule // inferred from electronic annotation /// 0030141 // secretory granule // inferred from sequence or structural similarity /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","","chr16:67209506-67213455 (-) // 91.82 // q22.1"]
["11759210_x_at",0.034430027,-0.14435196,0.28383398,-0.034430265,-0.06442714,0.053961992,0.8318816,0.6024202,1.051855,0.0729358,1.051855,"up","AKD1",221264,"0006139 // nucleobase-containing compound metabolic process // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0019205 // nucleobase-containing compound kinase activity // inferred from electronic annotation","chr6:109870886-110012415 (-) // 89.82 // q21"]
["11763596_a_at",-0.1294012,-0.0029754639,0.09725714,0.03129196,0.0029754639,-0.029673576,0.9482469,0.85492736,-1.009218,-0.013237811,1.009218,"down","JAKMIP3",282973,"","0005794 // Golgi apparatus // inferred from electronic annotation","0008017 // microtubule binding // inferred from electronic annotation /// 0019900 // kinase binding // inferred from electronic annotation","chr10:133975286-133996696 (+) // 99.96 // q26.3"]
["11744682_x_at",0.09522724,-0.071427345,-0.10130787,0.087750435,-0.0039463043,0.0039463043,0.74608725,0.46221212,-1.0389211,-0.055086117,1.0389211,"down","EIF5A",1984,"0006406 // mRNA export from nucleus // inferred from mutant phenotype /// 0006412 // translation // inferred from electronic annotation /// 0006414 // translational elongation // inferred from sequence or structural similarity /// 0006414 // translational elongation // inferred from electronic annotation /// 0006452 // translational frameshifting // inferred from electronic annotation /// 0006611 // protein export from nucleus // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from direct assay /// 0006913 // nucleocytoplasmic transport // inferred from mutant phenotype /// 0006917 // induction of apoptosis // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008612 // peptidyl-lysine modification to hypusine // traceable author statement /// 0008612 // peptidyl-lysine modification to hypusine // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045901 // positive regulation of translational elongation // inferred from sequence or structural similarity /// 0045901 // positive regulation of translational elongation // inferred from electronic annotation /// 0045905 // positive regulation of translational termination // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005642 // annulate lamellae // inferred from direct assay /// 0005643 // nuclear pore // inferred from direct assay /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // inferred from sequence or structural similarity /// 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017070 // U6 snRNA binding // inferred from direct assay /// 0043022 // ribosome binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction","chr17:7210928-7215772 (+) // 85.4 // p13.1"]
["11754620_s_at",0.35463428,0.23556519,0.37804222,-0.23556519,-0.34778595,-0.24163055,0.0307125,0.00047431968,1.5133452,0.5977411,1.5133452,"up","PKP4",8502,"0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0032321 // positive regulation of Rho GTPase activity // inferred from direct assay /// 0071777 // positive regulation of cell cycle cytokinesis // inferred from mutant phenotype","0000922 // spindle pole // inferred from direct assay /// 0000922 // spindle pole // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // traceable author statement /// 0009898 // internal side of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030057 // desmosome // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0030496 // midbody // inferred from electronic annotation /// 0051233 // spindle midzone // inferred from direct assay /// 0072686 // mitotic spindle // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr2:159499031-159537938 (+) // 99.78 // q24.1"]
["11715453_a_at",0.32492828,0.014946938,-0.052122116,0.474061,-0.09347534,-0.014946938,0.9672963,0.9085044,-1.0181583,-0.025961908,1.0181583,"down","COL4A2",1284,"0001525 // angiogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0016525 // negative regulation of angiogenesis // inferred from direct assay /// 0030198 // extracellular matrix organization // non-traceable author statement /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005587 // collagen type IV // traceable author statement /// 0005587 // collagen type IV // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0031012 // extracellular matrix // traceable author statement","0005201 // extracellular matrix structural constituent // traceable author statement /// 0005201 // extracellular matrix structural constituent // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr13:110959613-111165374 (+) // 97.94 // q34"]
["11726315_a_at",0.24001503,0.005493641,-0.005493641,0.027992249,-0.12389994,-0.069266796,0.5292545,0.21421891,1.098141,0.13506325,1.098141,"up","METTL22",79091,"0032259 // methylation // inferred from electronic annotation","","0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr16:8715496-8740079 (+) // 98.33 // p13.2"]
["11754441_a_at",-0.03499508,0.08556843,0.012064934,0.16443539,-0.020282269,-0.012064934,0.9079288,0.7565246,-1.0161757,-0.023149937,1.0161757,"down","AGAP3",116988,"0000060 // protein import into nucleus, translocation // inferred from electronic annotation /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0032312 // regulation of ARF GTPase activity // inferred from electronic annotation /// 0034614 // cellular response to reactive oxygen species // inferred from electronic annotation /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030131 // clathrin adaptor complex // inferred from electronic annotation /// 0071944 // cell periphery // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008060 // ARF GTPase activator activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0031593 // polyubiquitin binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:150831511-150841521 (+) // 98.73 // q36.1"]
["11763723_a_at",0.44442463,0.047870636,-0.047870636,0.17451382,-0.16726398,-0.12983894,0.6764458,0.36594766,1.1399769,0.18900454,1.1399769,"up","SRRT",51593,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from sequence or structural similarity /// 0008283 // cell proliferation // inferred from electronic annotation /// 0031047 // gene silencing by RNA // inferred from electronic annotation /// 0031053 // primary miRNA processing // inferred from mutant phenotype /// 0031053 // primary miRNA processing // inferred from electronic annotation /// 0046685 // response to arsenic-containing substance // non-traceable author statement /// 0097150 // neuronal stem cell maintenance // inferred from sequence or structural similarity","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from sequence or structural similarity /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction","chr7:100472725-100486285 (+) // 99.77 // q22.1"]
["11752377_a_at",0.040973663,0.014015198,0.010458469,-0.17715645,-0.21393347,-0.010457993,0.30347988,0.06986888,1.113935,0.15566504,1.113935,"up","CASC3",22794,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0008298 // intracellular mRNA localization // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0035145 // exon-exon junction complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from direct assay","chr17:38296569-38328417 (+) // 90.72 // q21.1"]
["11754748_x_at",-0.1902237,-0.049139023,0.049139023,-0.07817936,0.11530447,0.31101608,0.5652823,0.2458524,-1.132456,-0.17945492,1.132456,"down","GFAP",2670,"0009611 // response to wounding // inferred from electronic annotation /// 0010625 // positive regulation of Schwann cell proliferation // inferred from electronic annotation /// 0010977 // negative regulation of neuron projection development // inferred from electronic annotation /// 0014002 // astrocyte development // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0031102 // neuron projection regeneration // inferred from electronic annotation /// 0045103 // intermediate filament-based process // inferred from electronic annotation /// 0045109 // intermediate filament organization // inferred from electronic annotation /// 0051580 // regulation of neurotransmitter uptake // inferred from electronic annotation /// 0060020 // Bergmann glial cell differentiation // inferred from electronic annotation /// 0060291 // long-term synaptic potentiation // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005882 // intermediate filament // inferred from electronic annotation /// 0005882 // intermediate filament // traceable author statement /// 0042995 // cell projection // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation /// 0044464 // cell part // inferred from electronic annotation","0005178 // integrin binding // inferred from electronic annotation /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement","chr17:42982992-42992868 (-) // 90.53 // q21.31"]
["11760250_at",-0.37365198,0.07922268,0.0063757896,0.01234293,-0.006376028,-0.23366833,0.96666265,0.9066665,-1.014042,-0.020117436,1.014042,"down","SDHA",6389,"0006099 // tricarboxylic acid cycle // inferred from electronic annotation /// 0006099 // tricarboxylic acid cycle // traceable author statement /// 0006105 // succinate metabolic process // inferred from direct assay /// 0006105 // succinate metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007399 // nervous system development // inferred from mutant phenotype /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // inferred from direct assay /// 0022904 // respiratory electron transport chain // traceable author statement /// 0022904 // respiratory electron transport chain // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from sequence or structural similarity /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005749 // mitochondrial respiratory chain complex II // inferred from sequence or structural similarity /// 0005749 // mitochondrial respiratory chain complex II // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0000104 // succinate dehydrogenase activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008177 // succinate dehydrogenase (ubiquinone) activity // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016627 // oxidoreductase activity, acting on the CH-CH group of donors // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation","chr5:218419-251979 (+) // 98.76 // p15.33"]
["11730764_a_at",-0.35385323,0.010445595,0.03826046,0.014539242,-0.22593784,-0.010445595,0.9494898,0.85993266,-1.0194335,-0.027767666,1.0194335,"down","CD177",57126,"0007596 // blood coagulation // traceable author statement /// 0050900 // leukocyte migration // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation","","chr19:43857810-43867725 (+) // 79.41 // q13.31"]
["11740356_a_at",-0.028650284,0.044546127,0.16465044,-0.09730816,-0.09925413,0.028650284,0.4786096,0.17462298,1.0838407,0.11615276,1.0838407,"up","GPR137C",283554,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr14:53019865-53104430 (+) // 98.0 // q22.1"]
["AFFX-PheX-5_at",0.020055294,-0.049883842,0.15352964,-0.02005577,-0.15508938,0.086437225,0.7608999,0.48398545,1.0503011,0.07080294,1.0503011,"up",0.15352964,"","","0000160 // two-component signal transduction system (phosphorelay) // inferred from electronic annotation /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009073 // aromatic amino acid family biosynthetic process // inferred from electronic annotation /// 0009094 // L-phenylalanine biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation /// 0030435 // sporulation resulting in formation of a cellular spore // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0000155 // two-component sensor activity // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0004664 // prephenate dehydratase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation"]
["11756875_x_at",0.1498394,-0.009077072,0.034100533,0.00040912628,-0.00040912628,-0.049233437,0.5252242,0.21097438,1.0531411,0.07469876,1.0531411,"up","COMMD6",170622,"0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0051059 // NF-kappaB binding // inferred from physical interaction","chr13:76100572-76112057 (-) // 80.69 // q22.2"]
["11748160_s_at",-0.19643688,0.14259052,-0.0024328232,0.0024328232,0.05111885,-0.16295338,0.96038574,0.8876496,1.0123495,0.017707428,1.0123495,"up","LAMP2",3920,"0002576 // platelet degranulation // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement","0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0005770 // late endosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // inferred from electronic annotation /// 0031088 // platelet dense granule membrane // inferred from direct assay /// 0031088 // platelet dense granule membrane // traceable author statement /// 0031902 // late endosome membrane // inferred from direct assay","","chrX:119572463-119603151 (-) // 94.96 // q24"]
["11751267_a_at",-0.044275284,0.08680034,-0.17087007,-0.10006094,0.22577095,0.044275284,0.7408693,0.45413586,-1.0713601,-0.09944349,1.0713601,"down","ADAMDEC1",27299,"0006508 // proteolysis // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement /// 0007162 // negative regulation of cell adhesion // non-traceable author statement /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0004222 // metalloendopeptidase activity // non-traceable author statement /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:24242017-24263004 (+) // 97.51 // p21.2"]
["11719468_a_at",0.018989563,0.06754112,0.09056854,-0.1374836,-0.03899002,-0.018989563,0.23652998,0.042458754,1.0898937,0.12418743,1.0898937,"up","PRPF31",26121,"0000244 // assembly of spliceosomal tri-snRNP // inferred from direct assay /// 0000244 // assembly of spliceosomal tri-snRNP // inferred from mutant phenotype /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005684 // U2-type spliceosomal complex // inferred by curator /// 0005687 // U4 snRNP // inferred from direct assay /// 0005690 // U4atac snRNP // traceable author statement /// 0015030 // Cajal body // inferred from direct assay /// 0015030 // Cajal body // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0046540 // U4/U6 x U5 tri-snRNP complex // inferred from direct assay /// 0071339 // MLL1 complex // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0043021 // ribonucleoprotein complex binding // inferred from direct assay /// 0070990 // snRNP binding // inferred from physical interaction","chr19:54618789-54635144 (+) // 92.09 // q13.42"]
["11750547_a_at",-0.15823913,-0.07242584,0.051445007,0.0050623417,0.055784225,-0.00506258,0.6059395,0.28621885,-1.0557986,-0.07833473,1.0557986,"down","GALNT14",79623,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0016266 // O-glycan processing // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004653 // polypeptide N-acetylgalactosaminyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr2:31133667-31360887 (-) // 99.62 // p23.1"]
["11730054_s_at",-0.30067635,0.10701275,0.0344038,-0.28146553,0.045347214,-0.0344038,0.9375233,0.82755244,1.0260403,0.03708742,1.0260403,"up","SNX16",64089,"0006622 // protein targeting to lysosome // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0008333 // endosome to lysosome transport // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0045022 // early endosome to late endosome transport // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005770 // late endosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031313 // extrinsic to endosome membrane // inferred from direct assay /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","0008289 // lipid binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from direct assay /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction","chr8:82711819-82754534 (-) // 97.34 // q21.13"]
["11739723_x_at",-0.10295725,0.016842365,0.34504032,-0.016842365,-0.019060373,0.20499277,0.94811106,0.8545094,1.0209733,0.029945172,1.0209733,"up","ATP2B2",491,"0000902 // cell morphogenesis // inferred from electronic annotation /// 0003407 // neural retina development // inferred from electronic annotation /// 0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from mutant phenotype /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0006996 // organelle organization // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0007605 // sensory perception of sound // inferred from mutant phenotype /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008361 // regulation of cell size // inferred from electronic annotation /// 0021549 // cerebellum development // inferred from electronic annotation /// 0021692 // cerebellar Purkinje cell layer morphogenesis // inferred from electronic annotation /// 0021702 // cerebellar Purkinje cell differentiation // inferred from electronic annotation /// 0021707 // cerebellar granule cell differentiation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from direct assay /// 0034220 // ion transmembrane transport // traceable author statement /// 0040011 // locomotion // inferred from electronic annotation /// 0042428 // serotonin metabolic process // inferred from electronic annotation /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0045299 // otolith mineralization // inferred from electronic annotation /// 0046068 // cGMP metabolic process // inferred from electronic annotation /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0050808 // synapse organization // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation /// 0050910 // detection of mechanical stimulus involved in sensory perception of sound // inferred from electronic annotation /// 0051480 // cytosolic calcium ion homeostasis // inferred from mutant phenotype /// 0051480 // cytosolic calcium ion homeostasis // inferred from electronic annotation /// 0051928 // positive regulation of calcium ion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0060088 // auditory receptor cell stereocilium organization // inferred from electronic annotation /// 0060113 // inner ear receptor cell differentiation // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation /// 0090102 // cochlea development // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // non-traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005388 // calcium-transporting ATPase activity // inferred from direct assay /// 0005388 // calcium-transporting ATPase activity // non-traceable author statement /// 0005388 // calcium-transporting ATPase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from direct assay /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from direct assay /// 0030899 // calcium-dependent ATPase activity // inferred from electronic annotation /// 0035254 // glutamate receptor binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:10365706-10547341 (-) // 95.69 // p25.3"]
["11715784_s_at",-0.15124416,-0.09583044,0.047533512,-0.0021076202,0.0021076202,0.007194042,0.628215,0.30971193,-1.0489252,-0.068911746,1.0489252,"down","PRR4",11272,"0007601 // visual perception // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement","","chr12:10998447-11002074 (-) // 89.06 // p13.2"]
["11746483_a_at",0.21489048,0.2099204,-0.08621073,0.003979683,-0.003979683,-0.21840858,0.51962215,0.20672375,1.1373447,0.18566959,1.1373447,"up","MYO6",4646,"0006605 // protein targeting // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from sequence or structural similarity /// 0006897 // endocytosis // inferred from mutant phenotype /// 0006897 // endocytosis // inferred from sequence or structural similarity /// 0006897 // endocytosis // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007416 // synapse assembly // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from direct assay /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0014047 // glutamate secretion // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016358 // dendrite development // inferred from electronic annotation /// 0030048 // actin filament-based movement // inferred from sequence or structural similarity /// 0030048 // actin filament-based movement // non-traceable author statement /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from direct assay /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0042491 // auditory receptor cell differentiation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0051046 // regulation of secretion // inferred from mutant phenotype /// 0071257 // cellular response to electrical stimulus // inferred from electronic annotation","0001726 // ruffle // inferred from direct assay /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005902 // microvillus // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0005938 // cell cortex // inferred from sequence or structural similarity /// 0012506 // vesicle membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0016459 // myosin complex // inferred from electronic annotation /// 0016461 // unconventional myosin complex // traceable author statement /// 0016461 // unconventional myosin complex // non-traceable author statement /// 0016591 // DNA-directed RNA polymerase II, holoenzyme // inferred from direct assay /// 0030139 // endocytic vesicle // inferred from sequence or structural similarity /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030665 // clathrin coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from direct assay /// 0031941 // filamentous actin // inferred from sequence or structural similarity /// 0031965 // nuclear membrane // inferred from direct assay /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation /// 0045334 // clathrin-coated endocytic vesicle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from sequence or structural similarity /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // traceable author statement /// 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from sequence or structural similarity /// 0005516 // calmodulin binding // traceable author statement /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0043531 // ADP binding // inferred from sequence or structural similarity /// 0051015 // actin filament binding // inferred from direct assay /// 0051015 // actin filament binding // inferred from sequence or structural similarity /// 0060001 // minus-end directed microfilament motor activity // non-traceable author statement","chr6:76527242-76624934 (+) // 97.36 // q14.1"]
["11758582_s_at",-0.050302505,0.0037403107,-0.0037403107,0.15605879,0.2810974,-0.0482831,0.5207199,0.20755002,-1.1067979,-0.14639185,1.1067979,"down","SIX4",51804,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048538 // thymus development // inferred from electronic annotation /// 0048699 // generation of neurons // inferred from electronic annotation /// 0048701 // embryonic cranial skeleton morphogenesis // inferred from electronic annotation /// 0048704 // embryonic skeletal system morphogenesis // inferred from electronic annotation /// 0048856 // anatomical structure development // inferred from electronic annotation /// 0051451 // myoblast migration // inferred from electronic annotation /// 0072075 // metanephric mesenchyme development // inferred from electronic annotation /// 0072095 // regulation of branch elongation involved in ureteric bud branching // inferred from electronic annotation /// 0072107 // positive regulation of ureteric bud formation // inferred from electronic annotation /// 0090190 // positive regulation of branching involved in ureteric bud morphogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr14:61176260-61176664 (-) // 99.75 // q23.1"]
["11725150_s_at",0.07891989,-0.2972722,-0.27605915,0.04803276,-0.048032284,0.050290108,0.54068846,0.2237599,-1.1341153,-0.18156737,1.1341153,"down","HR",55806,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0051291 // protein heterooligomerization // inferred from electronic annotation","0000118 // histone deacetylase complex // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0016604 // nuclear body // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0042809 // vitamin D receptor binding // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046966 // thyroid hormone receptor binding // inferred from electronic annotation","chr8:21971927-21989381 (-) // 96.75 // p21.3"]
["11736825_a_at",0.04771471,-0.04771471,0.15447426,-0.2008872,-0.068525314,0.13579512,0.73662466,0.4470695,1.0688286,0.096030496,1.0688286,"up","EPN2",22905,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0030100 // regulation of endocytosis // inferred from electronic annotation /// 0048568 // embryonic organ development // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0030128 // clathrin coat of endocytic vesicle // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0008289 // lipid binding // inferred from electronic annotation","chr17:19140689-19240028 (+) // 99.44 // p11.2"]
["11724915_at",0.37457895,0.6742983,0.5281048,-0.5104017,-0.5085268,-0.37457943,0.032026507,0.0005297228,1.9864099,0.9901633,1.9864099,"up","TMTC3",160418,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:88536072-88593664 (+) // 91.71 // q21.32"]
["11755614_s_at",-0.04419279,0.036601543,0.027173996,0.09717178,-0.027173996,-0.17850018,0.8500989,0.6367954,1.0300362,0.042695057,1.0300362,"up","FERMT1",55612,"0007155 // cell adhesion // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0043616 // keratinocyte proliferation // inferred from direct assay /// 0051546 // keratinocyte migration // inferred from direct assay /// 0090162 // establishment of epithelial cell polarity // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation","chr20:6055711-6074819 (-) // 99.33 // p12.3"]
["11731628_a_at",0.08764267,-0.05108261,0.11001396,-0.061314583,0.05108261,-0.053956985,0.63873756,0.3211623,1.0499017,0.07025429,1.0499017,"up","OSGIN2",734,"0007126 // meiosis // non-traceable author statement /// 0007126 // meiosis // inferred from electronic annotation /// 0007281 // germ cell development // non-traceable author statement","","","chr8:90914767-90940193 (+) // 94.51 // q21.3"]
["11731824_at",-0.04862356,-0.107420206,0.048623323,0.1099658,-0.102294445,0.33177662,0.643535,0.32644966,-1.1087669,-0.1489561,1.1087669,"down","GPR83",10888,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004983 // neuropeptide Y receptor activity // inferred from electronic annotation","chr11:94110481-94134585 (-) // 83.9 // q21"]
["11727614_at",-0.28332567,0.006105423,-0.048259735,0.06491947,-0.006105423,0.18247938,0.4376217,0.14478347,-1.1399136,-0.18892443,1.1399136,"down","SCN2B",6327,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0035725 // sodium ion transmembrane transport // inferred from direct assay /// 0035725 // sodium ion transmembrane transport // inferred from electronic annotation /// 0046684 // response to pyrethroid // inferred from electronic annotation /// 0060048 // cardiac muscle contraction // inferred from mutant phenotype /// 0060371 // regulation of atrial cardiomyocyte membrane depolarization // inferred from mutant phenotype /// 0086002 // regulation of cardiac muscle cell action potential involved in contraction // inferred from mutant phenotype /// 0086091 // regulation of heart rate by cardiac conduction // inferred from mutant phenotype /// 0090072 // positive regulation of sodium ion transport via voltage-gated sodium channel activity // inferred from direct assay /// 2000649 // regulation of sodium ion transmembrane transporter activity // inferred from direct assay","0001518 // voltage-gated sodium channel complex // inferred from direct assay /// 0001518 // voltage-gated sodium channel complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005248 // voltage-gated sodium channel activity // inferred from electronic annotation /// 0005272 // sodium channel activity // inferred from electronic annotation /// 0017080 // sodium channel regulator activity // inferred from direct assay /// 0086006 // voltage-gated sodium channel activity involved in regulation of cardiac muscle cell action potential // inferred from mutant phenotype","chr11:118033520-118047388 (-) // 90.03 // q23.3"]
["11722745_a_at",0.1117239,0.12977362,0.046471596,-0.046472073,-0.24648237,-0.12865543,0.16308162,0.020199075,1.1781526,0.23652637,1.1781526,"up","MEF2B /// MEF2BNB /// MEF2BNB-MEF2B","100271849 /// 4207 /// 729991","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007507 // heart development // inferred from expression pattern /// 0007517 // muscle organ development // traceable author statement","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr19:19292684-19303400 (-) // 73.62 // p13.11"]
["11753875_a_at",0.25479603,0.05225563,-0.027691841,0.027691841,-0.1220026,-0.22347832,0.44295767,0.14824443,1.147942,0.19904968,1.147942,"up","POLR2L",5441,"0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006356 // regulation of transcription from RNA polymerase I promoter // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006370 // 7-methylguanosine mRNA capping // traceable author statement /// 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0006385 // transcription elongation from RNA polymerase III promoter // traceable author statement /// 0006386 // termination of RNA polymerase III transcription // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0050434 // positive regulation of viral transcription // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005665 // DNA-directed RNA polymerase II, core complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:840371-842508 (-) // 98.04 // p15.5"]
["11718585_x_at",-0.034104824,-0.056301594,-0.046570778,0.0845747,0.053566456,0.034104824,0.06678942,0.0030142113,-1.0740598,-0.10307438,1.0740598,"down","SAP30BP",29115,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr17:73663195-73704139 (+) // 86.96 // q25.1"]
["11738838_a_at",-0.19960642,0.044777155,0.09320307,-0.3401723,-0.044776917,0.3373499,0.99423647,0.9837698,-1.0032462,-0.0046756747,1.0032462,"down","IL5RA",3568,"0002437 // inflammatory response to antigenic stimulus // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0008283 // cell proliferation // non-traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0032674 // regulation of interleukin-5 production // inferred from electronic annotation /// 0038043 // interleukin-5-mediated signaling pathway // traceable author statement /// 0038043 // interleukin-5-mediated signaling pathway // non-traceable author statement /// 0071310 // cellular response to organic substance // inferred from electronic annotation","0005615 // extracellular space // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005895 // interleukin-5 receptor complex // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004872 // receptor activity // inferred from electronic annotation /// 0004896 // cytokine receptor activity // inferred from electronic annotation /// 0004914 // interleukin-5 receptor activity // traceable author statement /// 0004914 // interleukin-5 receptor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr3:3133487-3152058 (-) // 82.76 // p26.2"]
["11740618_at",-0.09439683,-0.31535292,0.022993565,-0.022993565,0.08007288,0.4045112,0.45463726,0.1569396,-1.2165387,-0.28278217,1.2165387,"down","ADRA1D",146,"0001986 // negative regulation of the force of heart contraction involved in baroreceptor response to increased systemic arterial blood pressure // inferred from electronic annotation /// 0001994 // norepinephrine-epinephrine vasoconstriction involved in regulation of systemic arterial blood pressure // inferred from electronic annotation /// 0006259 // DNA metabolic process // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0071875 // adrenergic receptor signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004935 // adrenergic receptor activity // inferred from electronic annotation /// 0004937 // alpha1-adrenergic receptor activity // inferred from electronic annotation /// 0004937 // alpha1-adrenergic receptor activity // traceable author statement","chr20:4200906-4229662 (-) // 89.61 // p13"]
["11751847_x_at",0.17330074,-0.047973633,-0.06366348,0.047973633,0.07116604,-0.22763348,0.86573756,0.66800165,1.0400977,0.05671907,1.0400977,"up","ORAOV1",220064,"0006826 // iron ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0006880 // intracellular sequestering of iron ion // inferred from direct assay /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006955 // immune response // inferred from sequence or structural similarity /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0016044 // cellular membrane organization // traceable author statement /// 0048147 // negative regulation of fibroblast proliferation // inferred from direct assay /// 0055085 // transmembrane transport // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060547 // negative regulation of necrotic cell death // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0008043 // intracellular ferritin complex // traceable author statement","0004322 // ferroxidase activity // inferred from electronic annotation /// 0005506 // iron ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008199 // ferric iron binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046914 // transition metal ion binding // inferred from electronic annotation","chr11:69482126-69490130 (-) // 99.68 // q13.3"]
["11725931_at",-0.19496822,-0.20673752,-0.16873789,0.43581486,0.16873741,0.18533611,0.09490936,0.006494456,-1.3693051,-0.45344397,1.3693051,"down","HSPA5",3309,"0002576 // platelet degranulation // traceable author statement /// 0006200 // ATP catabolic process // inferred from sequence or structural similarity /// 0006916 // anti-apoptosis // inferred from mutant phenotype /// 0006916 // anti-apoptosis // traceable author statement /// 0006983 // ER overload response // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0021589 // cerebellum structural organization // inferred from electronic annotation /// 0021680 // cerebellar Purkinje cell layer development // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030433 // ER-associated protein catabolic process // traceable author statement /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0031398 // positive regulation of protein ubiquitination // inferred from electronic annotation /// 0042149 // cellular response to glucose starvation // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from electronic annotation /// 0060904 // regulation of protein folding in endoplasmic reticulum // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0008180 // signalosome // inferred from direct assay /// 0008303 // caspase complex // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // inferred from direct assay /// 0030496 // midbody // inferred from direct assay /// 0034663 // endoplasmic reticulum chaperone complex // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from sequence or structural similarity /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0030674 // protein binding, bridging // non-traceable author statement /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0043022 // ribosome binding // inferred from electronic annotation /// 0043027 // cysteine-type endopeptidase inhibitor activity involved in apoptotic process // inferred from direct assay /// 0051082 // unfolded protein binding // traceable author statement /// 0051082 // unfolded protein binding // inferred from electronic annotation /// 0051087 // chaperone binding // traceable author statement /// 0051787 // misfolded protein binding // inferred from direct assay /// 0051787 // misfolded protein binding // inferred from electronic annotation","chr9:127997128-128003771 (-) // 89.6 // q33.3"]
["11716689_s_at",-0.1906228,0.050855637,0.0037970543,0.043014526,-0.0037970543,-0.014747143,0.7843235,0.5204418,-1.0377653,-0.053480152,1.0377653,"down","GOLGA3",2802,"0006891 // intra-Golgi vesicle-mediated transport // non-traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0017119 // Golgi transport complex // inferred from direct assay /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0005215 // transporter activity // non-traceable author statement","chr12:133345501-133405439 (-) // 89.54 // q24.33"]
["11719213_s_at",0.094631195,0.10451698,0.03886032,-0.03886032,-0.13230228,-0.08238983,0.10733103,0.008404827,1.1202756,0.16385372,1.1202756,"up","NOTCH2 /// NOTCH2NL","388677 /// 4853","0001709 // cell fate determination // traceable author statement /// 0001709 // cell fate determination // inferred from electronic annotation /// 0002011 // morphogenesis of an epithelial sheet // inferred from electronic annotation /// 0002437 // inflammatory response to antigenic stimulus // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006916 // anti-apoptosis // traceable author statement /// 0006917 // induction of apoptosis // traceable author statement /// 0006959 // humoral immune response // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007219 // Notch signaling pathway // traceable author statement /// 0007220 // Notch receptor processing // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007275 // multicellular organismal development // non-traceable author statement /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0007399 // nervous system development // non-traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0009887 // organ morphogenesis // inferred from expression pattern /// 0010467 // gene expression // traceable author statement /// 0016049 // cell growth // inferred from direct assay /// 0019827 // stem cell maintenance // traceable author statement /// 0030097 // hemopoiesis // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0042246 // tissue regeneration // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0046579 // positive regulation of Ras protein signal transduction // inferred from direct assay /// 0046849 // bone remodeling // inferred from mutant phenotype /// 0050793 // regulation of developmental process // inferred from electronic annotation /// 0072602 // interleukin-4 secretion // inferred from electronic annotation","0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // non-traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:145208994-145286824 (+) // 82.03 // q21.1 /// chr1:120534486-120612390 (-) // 76.17 // p12"]
["11725033_a_at",-0.35120678,-0.023674488,0.023674011,-0.19083118,0.091760635,0.21486998,0.70769763,0.4072647,-1.113938,-0.1556689,1.113938,"down","SYP",6855,"0006810 // transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from sequence or structural similarity /// 0016188 // synaptic vesicle maturation // non-traceable author statement /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from sequence or structural similarity /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048172 // regulation of short-term neuronal synaptic plasticity // inferred from sequence or structural similarity /// 0048172 // regulation of short-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048499 // synaptic vesicle membrane organization // non-traceable author statement /// 0071310 // cellular response to organic substance // inferred from electronic annotation /// 2000474 // regulation of opioid receptor signaling pathway // inferred from sequence or structural similarity","0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030285 // integral to synaptic vesicle membrane // non-traceable author statement /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0043229 // intracellular organelle // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0044306 // neuron projection terminus // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048786 // presynaptic active zone // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0005509 // calcium ion binding // non-traceable author statement /// 0015485 // cholesterol binding // inferred from direct assay /// 0017075 // syntaxin-1 binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0042169 // SH2 domain binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation","chrX:49044267-49055496 (-) // 88.76 // p11.23"]
["11727848_a_at",0.118328094,0.074832916,-0.021905899,0.021905899,-0.1909504,-0.21854019,0.3593052,0.09769872,1.137826,0.18627991,1.137826,"up","GNA12",2768,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0006184 // GTP catabolic process // not recorded /// 0006184 // GTP catabolic process // traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // not recorded /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0007266 // Rho protein signal transduction // not recorded /// 0007266 // Rho protein signal transduction // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation","0005834 // heterotrimeric G-protein complex // not recorded /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031234 // extrinsic to internal side of plasma membrane // not recorded /// 0031526 // brush border membrane // not recorded /// 0031526 // brush border membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // not recorded /// 0003924 // GTPase activity // traceable author statement /// 0004871 // signal transducer activity // not recorded /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004871 // signal transducer activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // not recorded /// 0031752 // D5 dopamine receptor binding // not recorded /// 0031752 // D5 dopamine receptor binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:2767742-2883962 (-) // 94.26 // p22.3"]
["11739614_at",0.31184483,0.07615614,0.025436401,-0.12269163,-0.03224325,-0.025436878,0.36774594,0.10205611,1.1470565,0.1979364,1.1470565,"up","CD3EAP",10849,"0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0009303 // rRNA transcription // inferred from electronic annotation /// 0009303 // rRNA transcription // traceable author statement","0000120 // RNA polymerase I transcription factor complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005730 // nucleolus // traceable author statement /// 0005736 // DNA-directed RNA polymerase I complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay","0003899 // DNA-directed RNA polymerase activity // inferred from electronic annotation","chr19:45909386-45955388 (+) // 71.15 // q13.32"]
["11728085_s_at",0.0422678,0.2730422,-0.1457882,0.18861914,-0.11740303,-0.0422678,0.9147868,0.773462,1.0330126,0.04685789,1.0330126,"up","BMPR1B",658,"0001501 // skeletal system development // inferred from mutant phenotype /// 0001502 // cartilage condensation // non-traceable author statement /// 0001502 // cartilage condensation // inferred from electronic annotation /// 0001550 // ovarian cumulus expansion // inferred from sequence or structural similarity /// 0001550 // ovarian cumulus expansion // inferred from electronic annotation /// 0001654 // eye development // inferred from sequence or structural similarity /// 0001654 // eye development // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007178 // transmembrane receptor protein serine/threonine kinase signaling pathway // inferred from mutant phenotype /// 0007178 // transmembrane receptor protein serine/threonine kinase signaling pathway // inferred from electronic annotation /// 0009953 // dorsal/ventral pattern formation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030501 // positive regulation of bone mineralization // inferred from mutant phenotype /// 0030509 // BMP signaling pathway // inferred from direct assay /// 0030509 // BMP signaling pathway // non-traceable author statement /// 0030509 // BMP signaling pathway // traceable author statement /// 0030509 // BMP signaling pathway // inferred from electronic annotation /// 0031290 // retinal ganglion cell axon guidance // inferred from electronic annotation /// 0035108 // limb morphogenesis // inferred from mutant phenotype /// 0042698 // ovulation cycle // inferred from sequence or structural similarity /// 0042698 // ovulation cycle // inferred from electronic annotation /// 0043010 // camera-type eye development // inferred from electronic annotation /// 0045597 // positive regulation of cell differentiation // inferred from mutant phenotype /// 0045669 // positive regulation of osteoblast differentiation // inferred from mutant phenotype /// 0051216 // cartilage development // inferred from electronic annotation /// 0060041 // retina development in camera-type eye // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // inferred by curator /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043235 // receptor complex // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004675 // transmembrane receptor protein serine/threonine kinase activity // inferred from mutant phenotype /// 0004675 // transmembrane receptor protein serine/threonine kinase activity // non-traceable author statement /// 0004675 // transmembrane receptor protein serine/threonine kinase activity // inferred from electronic annotation /// 0004702 // receptor signaling protein serine/threonine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005024 // transforming growth factor beta-activated receptor activity // inferred from electronic annotation /// 0005025 // transforming growth factor beta receptor activity, type I // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046332 // SMAD binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:95679118-96079599 (+) // 98.28 // q22.3"]
["11725145_a_at",0.007475853,-0.09701347,-0.028586864,0.39422417,0.11052132,-0.007475853,0.47342595,0.17091066,-1.1527913,-0.2051313,1.1527913,"down","MIS12",79003,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from mutant phenotype /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051382 // kinetochore assembly // inferred from direct assay","0000444 // MIS12/MIND type complex // inferred from direct assay /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr17:5390184-5394131 (+) // 75.83 // p13.2"]
["11736786_s_at",0.38183117,-0.02169466,0.35107088,0.02169466,-0.3297081,-0.15867138,0.315705,0.075612895,1.312785,0.3926307,1.312785,"up","CATSPER2",117155,"0001539 // ciliary or flagellar motility // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0009566 // fertilization // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030317 // sperm motility // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0009434 // microtubule-based flagellum // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019861 // flagellum // inferred from electronic annotation /// 0020017 // flagellar membrane // inferred from electronic annotation /// 0036128 // CatSper complex // inferred from sequence or structural similarity /// 0042995 // cell projection // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr15:43922771-43941085 (-) // 93.77 // q15.3"]
["11715305_s_at",-0.08711338,-0.10579014,-0.0054712296,0.10686588,0.2059927,0.0054712296,0.27752072,0.058390263,-1.1268027,-0.17223491,1.1268027,"down","HOXA10",3206,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0007283 // spermatogenesis // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr7:27210210-27213955 (-) // 93.96 // p15.2"]
["11749623_s_at",0.039741516,0.048233032,0.10643482,-0.134974,-0.09326553,-0.039741993,0.12245582,0.011235343,1.1127506,0.15413034,1.1127506,"up","TYW1 /// TYW1B","441250 /// 55253","0008033 // tRNA processing // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0010181 // FMN binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation","chr7:66461854-66548504 (+) // 96.6 // q11.21 /// chr7:72193811-72298765 (-) // 99.91 // q11.22"]
["11744378_a_at",-0.100503445,0.13222551,0.03845644,0.08388615,-0.14680481,-0.03845644,0.81878114,0.579377,1.0404333,0.05718446,1.0404333,"up","KRT4",3851,"0007010 // cytoskeleton organization // non-traceable author statement /// 0030855 // epithelial cell differentiation // inferred from sequence or structural similarity /// 0030855 // epithelial cell differentiation // inferred from electronic annotation /// 0050680 // negative regulation of epithelial cell proliferation // inferred from sequence or structural similarity /// 0050680 // negative regulation of epithelial cell proliferation // inferred from electronic annotation","0005882 // intermediate filament // non-traceable author statement /// 0005882 // intermediate filament // inferred from electronic annotation /// 0045095 // keratin filament // inferred from electronic annotation","0005198 // structural molecule activity // non-traceable author statement /// 0005198 // structural molecule activity // inferred from electronic annotation","chr12:53200332-53208335 (-) // 90.63 // q13.13"]
["11744388_a_at",0.020098686,-0.008918762,0.04268837,-0.03720379,-0.101177216,0.008918762,0.45570266,0.15794371,1.0432682,0.061110094,1.0432682,"up","ARFRP1",10139,"0006184 // GTP catabolic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007369 // gastrulation // inferred from electronic annotation /// 0034067 // protein localization in Golgi apparatus // inferred from mutant phenotype /// 0042147 // retrograde transport, endosome to Golgi // inferred from mutant phenotype /// 0043001 // Golgi to plasma membrane protein transport // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation","chr20:62330002-62339010 (-) // 94.92 // q13.33"]
["11758750_x_at",-0.057570457,-0.112615585,-0.16966343,0.17514133,0.09005737,0.057570457,0.11511038,0.009808677,-1.1654385,-0.22087291,1.1654385,"down","YWHAZ",7534,"0002553 // histamine secretion by mast cell // inferred from electronic annotation /// 0006605 // protein targeting // inferred from electronic annotation /// 0006626 // protein targeting to mitochondrion // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0004497 // monooxygenase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation","chr8:101930804-101965594 (-) // 59.08 // q22.3"]
["11734587_x_at",-0.18810415,0.10754967,0.029939175,-0.17971277,0.03449726,-0.029939175,0.8920438,0.7224235,1.0291927,0.041513108,1.0291927,"up","BAGE2",85319,"","0005576 // extracellular region // inferred from electronic annotation","","chr21:11015382-11058323 (-) // 81.61 // p11.1"]
["11728810_a_at",0.15034676,-0.046664238,-0.058543205,0.017484665,0.029447556,-0.017484665,0.98039234,0.9433652,1.0036322,0.0052306456,1.0036322,"up","ECHDC3",79746,"0008152 // metabolic process // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation","chr10:11784393-11806065 (+) // 92.77 // p14"]
["11758729_x_at",-0.23808384,-0.029996872,0.029996872,-0.20486307,0.10618019,0.109752655,0.80982184,0.56389964,-1.059256,-0.08305124,1.059256,"down","MT2A",4502,"0006878 // cellular copper ion homeostasis // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0035690 // cellular response to drug // inferred from direct assay /// 0036016 // cellular response to interleukin-3 // inferred from expression pattern /// 0036018 // cellular response to erythropoietin // inferred from expression pattern /// 0045926 // negative regulation of growth // inferred from sequence or structural similarity /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0071294 // cellular response to zinc ion // inferred from expression pattern","0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity","0005515 // protein binding // inferred from physical interaction /// 0008144 // drug binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:56641940-56643409 (+) // 83.88 // q12.2"]
["11763991_at",0,-0.06725097,-0.14125681,0,0.07122517,0.15397477,0.31417325,0.07475409,-1.1054006,-0.14456925,1.1054006,"down","LINC00514 /// LOC100507378","100507378 /// 283875","","","","chr16:3051546-3052017 (+) // 74.1 // p13.3"]
["11755207_a_at",0.00310421,-0.12493801,0.0197649,-0.00310421,0.02789402,-0.140172,0.9834216,0.9517791,1.0030807,0.0044377153,1.0030807,"up","NT5E",4907,"0006144 // purine base metabolic process // traceable author statement /// 0006164 // purine nucleotide biosynthetic process // inferred from electronic annotation /// 0006195 // purine nucleotide catabolic process // traceable author statement /// 0006196 // AMP catabolic process // inferred from electronic annotation /// 0006206 // pyrimidine base metabolic process // traceable author statement /// 0006259 // DNA metabolic process // traceable author statement /// 0009166 // nucleotide catabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046085 // adenosine metabolic process // inferred from electronic annotation /// 0046086 // adenosine biosynthetic process // inferred from electronic annotation /// 0046135 // pyrimidine nucleoside catabolic process // traceable author statement /// 0050728 // negative regulation of inflammatory response // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement","0005624 // membrane fraction // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0008198 // ferrous iron binding // inferred from electronic annotation /// 0008253 // 5'-nucleotidase activity // not recorded /// 0008253 // 5'-nucleotidase activity // inferred from electronic annotation /// 0008253 // 5'-nucleotidase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:86159826-86205498 (+) // 92.66 // q14.3"]
["11751988_a_at",-0.012797356,-0.13517284,-0.2835884,0.21470642,0.16156101,0.012797356,0.25864232,0.05054269,-1.2087711,-0.2735411,1.2087711,"down","NFE2L1",4779,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006783 // heme biosynthetic process // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0009653 // anatomical structure morphogenesis // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003712 // transcription cofactor activity // traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr17:46125703-46138125 (+) // 96.76 // q21.32"]
["11760603_at",-0.34370017,-0.018857956,0.018857956,-0.22669888,0.26355648,0.09264612,0.73085505,0.43981168,-1.1155341,-0.15773457,1.1155341,"down","HES2",54626,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0008134 // transcription factor binding // non-traceable author statement","chr1:6472516-6484730 (-) // 41.54 // p36.31"]
["11743884_a_at",0.06453705,-0.26793432,-0.13085794,0.059069633,0.0737381,-0.059069633,0.5857438,0.26582396,-1.0988525,-0.13599776,1.0988525,"down","ADPRHL1",113622,"0051725 // protein de-ADP-ribosylation // inferred from electronic annotation","","0000287 // magnesium ion binding // inferred from electronic annotation /// 0003875 // ADP-ribosylarginine hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr13:114076259-114103856 (-) // 97.83 // q34"]
["11724847_a_at",0.1911242,0.08874726,-0.04404211,-0.09520292,-0.0016264915,0.0016264915,0.5306858,0.21576045,1.0794857,0.11034407,1.0794857,"up","GBA3",57733,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006687 // glycosphingolipid metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016139 // glycoside catabolic process // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0046477 // glycosylceramide catabolic process // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds // inferred from electronic annotation /// 0004565 // beta-galactosidase activity // inferred from direct assay /// 0008422 // beta-glucosidase activity // inferred from direct assay /// 0008422 // beta-glucosidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0017042 // glycosylceramidase activity // inferred from direct assay /// 0043169 // cation binding // inferred from electronic annotation","chr4:22694536-22821191 (+) // 97.61 // p15.2"]
["11740094_a_at",-0.22652245,-0.10286474,-0.025698185,0.051339626,0.025698185,0.055697918,0.2608857,0.051626734,-1.119308,-0.16260707,1.119308,"down","BEST1",7439,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from direct assay /// 0006821 // chloride transport // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0007601 // visual perception // traceable author statement /// 0030321 // transepithelial chloride transport // inferred from direct assay /// 0030321 // transepithelial chloride transport // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050908 // detection of light stimulus involved in visual perception // inferred from electronic annotation /// 0051924 // regulation of calcium ion transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0034707 // chloride channel complex // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from direct assay /// 0005254 // chloride channel activity // inferred from electronic annotation","chr11:61717355-61731934 (+) // 91.36 // q12.3"]
["11754013_x_at",-0.057188988,0.0228796,0.024507523,-0.014784813,0.0069799423,-0.0069789886,0.9848009,0.95507985,1.0011518,0.0016607401,1.0011518,"up","RPL15",6138,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0005840 // ribosome // traceable author statement /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // traceable author statement","chr3:23958632-23961013 (+) // 91.05 // p24.2"]
["11729503_at",-0.040913105,-0.10404396,0.002140522,-0.002140522,0.16816854,0.24433327,0.32555467,0.08019551,-1.1363385,-0.18439262,1.1363385,"down","CCDC11",220136,"","","","chr18:47753562-47792892 (-) // 99.14 // q21.1"]
["11761656_at",-0.037662983,-0.18090343,0.2640524,-0.037175655,0.037175655,0.41406155,0.8056801,0.55625284,-1.0888902,-0.12285848,1.0888902,"down","FANCD2",2177,"0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007129 // synapsis // inferred from electronic annotation /// 0007276 // gamete generation // inferred from electronic annotation /// 0010332 // response to gamma radiation // inferred from direct assay","0000793 // condensed chromosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr3:10070307-10083245 (+) // 63.56 // p25.3"]
["11752921_s_at",-0.20486593,0.053982735,0.025128365,0.117640495,-0.18739414,-0.025128365,0.977538,0.93593895,-1.0071586,-0.010290939,1.0071586,"down","SPTY2D1",144108,"","","","chr11:18627952-18655894 (-) // 97.68 // p15.1"]
["11730654_at",0.119503975,-0.25036383,-0.23552704,0.06393242,-0.063146114,0.06314659,0.64265233,0.32536593,-1.1045356,-0.14343989,1.1045356,"down","C15orf62",643338,"","0005739 // mitochondrion // inferred from electronic annotation","","chr15:41060110-41064647 (+) // 91.92 // q15.1"]
["11726036_at",-0.24604654,0.09669638,0.008879185,-0.06807852,0.018980026,-0.008879662,0.9289443,0.80802184,-1.0192426,-0.027497545,1.0192426,"down","TRNAU1AP",54952,"0001514 // selenocysteine incorporation // inferred from sequence or structural similarity /// 0001514 // selenocysteine incorporation // inferred from electronic annotation /// 0006412 // translation // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr1:28879528-28905060 (+) // 98.42 // p35.3"]
["11753876_x_at",0.17510891,0.03145981,-0.03145981,0.08011818,-0.06598854,-0.0433321,0.71765304,0.42166293,1.0483379,0.06810385,1.0483379,"up","POLR2L",5441,"0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006356 // regulation of transcription from RNA polymerase I promoter // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006370 // 7-methylguanosine mRNA capping // traceable author statement /// 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0006385 // transcription elongation from RNA polymerase III promoter // traceable author statement /// 0006386 // termination of RNA polymerase III transcription // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0050434 // positive regulation of viral transcription // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005665 // DNA-directed RNA polymerase II, core complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:840371-842508 (-) // 98.04 // p15.5"]
["11756684_a_at",-0.023775578,0.023775578,0.078454494,-0.27623987,-0.5326023,0.05792141,0.49400702,0.18627635,1.2112179,0.2764584,1.2112179,"up","DYNLRB2",83657,"0006810 // transport // inferred from electronic annotation /// 0007018 // microtubule-based movement // non-traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005868 // cytoplasmic dynein complex // inferred from sequence or structural similarity /// 0005868 // cytoplasmic dynein complex // non-traceable author statement /// 0005868 // cytoplasmic dynein complex // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0030286 // dynein complex // inferred from electronic annotation","0003774 // motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // non-traceable author statement","chr16:80574924-80584544 (+) // 65.36 // q23.2"]
["11723939_a_at",0.12079239,0.0019187927,0.08643627,-0.0019187927,-0.042512894,-0.11573124,0.29175502,0.06425758,1.0890751,0.123103425,1.0890751,"up","CCNB1",891,"0000075 // cell cycle checkpoint // traceable author statement /// 0000079 // regulation of cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000086 // G2/M transition of mitotic cell cycle // non-traceable author statement /// 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // inferred from direct assay /// 0000278 // mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // inferred from electronic annotation /// 0001556 // oocyte maturation // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001933 // negative regulation of protein phosphorylation // inferred from electronic annotation /// 0006461 // protein complex assembly // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007080 // mitotic metaphase plate congression // inferred from mutant phenotype /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009636 // response to toxin // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0016572 // histone phosphorylation // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0031442 // positive regulation of mRNA 3'-end processing // inferred from electronic annotation /// 0033129 // positive regulation of histone phosphorylation // inferred from electronic annotation /// 0042246 // tissue regeneration // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043148 // mitotic spindle stabilization // inferred from mutant phenotype /// 0045931 // positive regulation of mitotic cell cycle // inferred from mutant phenotype /// 0046680 // response to DDT // inferred from electronic annotation /// 0048565 // digestive tract development // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0051987 // positive regulation of attachment of spindle microtubules to kinetochore // inferred from mutant phenotype /// 0055015 // ventricular cardiac muscle cell development // inferred from electronic annotation /// 0060045 // positive regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0060623 // regulation of chromosome condensation // inferred from electronic annotation /// 0071174 // mitotic cell cycle spindle checkpoint // inferred from mutant phenotype /// 0071283 // cellular response to iron(III) ion // inferred from electronic annotation /// 0071398 // cellular response to fatty acid // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from electronic annotation","0000922 // spindle pole // inferred from direct assay /// 0000942 // condensed nuclear chromosome outer kinetochore // inferred from direct assay /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation","0005113 // patched binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0035173 // histone kinase activity // inferred from electronic annotation","chr5:68462836-68474067 (+) // 90.74 // q13.2"]
["11741001_s_at",0.1435399,-0.17271662,-0.13914728,0.15631247,-0.12951183,0.12951183,0.75110245,0.46929488,-1.0778916,-0.10821208,1.0778916,"down","FAM13A",10144,"0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005096 // GTPase activator activity // inferred from electronic annotation","chr4:89647105-89744512 (-) // 97.95 // q22.1"]
["11719650_a_at",0.08461189,0.21774292,0.24707127,-0.24997044,-0.08969593,-0.08461189,0.124870665,0.011709597,1.2522895,0.32456815,1.2522895,"up","ARHGEF10",9639,"0022011 // myelination in peripheral nervous system // inferred from mutant phenotype /// 0033126 // positive regulation of GTP catabolic process // inferred from direct assay /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0051298 // centrosome duplication // inferred from mutant phenotype /// 0051496 // positive regulation of stress fiber assembly // inferred from mutant phenotype /// 0090307 // spindle assembly involved in mitosis // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // non-traceable author statement","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0019894 // kinesin binding // inferred from physical interaction","chr8:1791516-1906806 (+) // 96.21 // p23.3"]
["11755526_x_at",-0.1150229,-0.0473094,0.15380907,-0.029480457,0.029480457,0.14947557,0.83741045,0.6138128,-1.03718,-0.052666217,1.03718,"down","NDUFC2 /// NDUFC2-KCTD14","100532726 /// 4718","0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0006120 // mitochondrial electron transport, NADH to ubiquinone // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051260 // protein homooligomerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement /// 0008137 // NADH dehydrogenase (ubiquinone) activity // inferred from electronic annotation","chr11:77779394-77790887 (-) // 57.94 // q14.1"]
["11743220_at",-0.15767622,0.1213541,-0.025458336,-0.26538038,0.07021999,0.025458336,0.9248552,0.79947263,1.0252486,0.03597384,1.0252486,"up","NKX6-1",4825,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0003323 // type B pancreatic cell development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007224 // smoothened signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0009887 // organ morphogenesis // traceable author statement /// 0021912 // regulation of transcription from RNA polymerase II promoter involved in spinal cord motor neuron fate specification // inferred from electronic annotation /// 0021913 // regulation of transcription from RNA polymerase II promoter involved in ventral spinal cord interneuron specification // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031016 // pancreas development // inferred from sequence or structural similarity /// 0031018 // endocrine pancreas development // traceable author statement /// 0031018 // endocrine pancreas development // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0035094 // response to nicotine // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045686 // negative regulation of glial cell differentiation // inferred from electronic annotation /// 0045687 // positive regulation of glial cell differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0048709 // oligodendrocyte differentiation // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0051594 // detection of glucose // inferred from sequence or structural similarity /// 0071345 // cellular response to cytokine stimulus // inferred from electronic annotation /// 0071375 // cellular response to peptide hormone stimulus // inferred from electronic annotation /// 0072560 // type B pancreatic cell maturation // inferred from sequence or structural similarity /// 2000078 // positive regulation of type B pancreatic cell development // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0044424 // intracellular part // inferred from electronic annotation","0000976 // transcription regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr4:85414388-85419603 (-) // 85.79 // q21.23"]
["11751898_a_at",-0.26966572,0.08788252,-0.08788252,-0.20922995,0.12833548,0.1640935,0.7692095,0.49662638,-1.0849447,-0.11762154,1.0849447,"down","SCN8A",6334,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // non-traceable author statement /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007422 // peripheral nervous system development // inferred from sequence or structural similarity /// 0007517 // muscle organ development // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0007628 // adult walking behavior // inferred from electronic annotation /// 0009636 // response to toxin // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0035725 // sodium ion transmembrane transport // inferred from electronic annotation /// 0042552 // myelination // inferred from sequence or structural similarity /// 0055085 // transmembrane transport // inferred from electronic annotation","0001518 // voltage-gated sodium channel complex // inferred by curator /// 0001518 // voltage-gated sodium channel complex // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030018 // Z disc // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0033268 // node of Ranvier // inferred from sequence or structural similarity /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043194 // initial segment // inferred from sequence or structural similarity","0000166 // nucleotide binding // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005248 // voltage-gated sodium channel activity // inferred from direct assay /// 0005248 // voltage-gated sodium channel activity // non-traceable author statement /// 0005248 // voltage-gated sodium channel activity // inferred from electronic annotation /// 0005272 // sodium channel activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation","chr12:52056601-52201213 (+) // 99.45 // q13.13"]
["11720516_a_at",0.29097843,-0.057460785,0.057460785,0.23404884,-0.13995743,-0.19968891,0.7586278,0.48043784,1.0959576,0.13219203,1.0959576,"up","ZBTB4",57659,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:7362684-7387582 (-) // 92.78 // p13.1"]
["11743844_a_at",-0.25399637,0.11174488,0.063268185,-0.33023787,-0.063268185,0.14296722,0.9111569,0.7649218,1.0404338,0.057185125,1.0404338,"up","PROC",5624,"0006508 // proteolysis // non-traceable author statement /// 0006508 // proteolysis // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0007596 // blood coagulation // inferred from electronic annotation /// 0007599 // hemostasis // inferred from electronic annotation /// 0017187 // peptidyl-glutamic acid carboxylation // traceable author statement /// 0030195 // negative regulation of blood coagulation // traceable author statement /// 0030195 // negative regulation of blood coagulation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0050900 // leukocyte migration // traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005796 // Golgi lumen // traceable author statement /// 0005886 // plasma membrane // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // traceable author statement /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr2:128175995-128186791 (+) // 87.49 // q14.3"]
["11738987_x_at",0.23600674,0.32002735,0.27146912,-0.2560711,-0.33034992,-0.23600674,0.019855298,0.00012756092,1.4640623,0.54997694,1.4640623,"up","GABARAPL1",23710,"","0005622 // intracellular // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005776 // autophagic vacuole // inferred from direct assay /// 0005776 // autophagic vacuole // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032590 // dendrite membrane // inferred from electronic annotation /// 0032839 // dendrite cytoplasm // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0048487 // beta-tubulin binding // inferred from sequence or structural similarity /// 0050811 // GABA receptor binding // inferred from sequence or structural similarity","chr12:10365107-10375731 (+) // 93.79 // p13.2"]
["11749716_a_at",0.011036396,0.14155436,-0.04215908,-0.20876884,-0.011036396,0.614861,0.8946405,0.72788364,-1.0679727,-0.09487471,1.0679727,"down","SLC4A8",9498,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006820 // anion transport // inferred from electronic annotation /// 0015701 // bicarbonate transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0005452 // inorganic anion exchanger activity // inferred from electronic annotation /// 0008509 // anion transmembrane transporter activity // inferred from electronic annotation /// 0015297 // antiporter activity // inferred from electronic annotation /// 0015301 // anion:anion antiporter activity // inferred from electronic annotation","chr12:51818715-51868352 (+) // 95.71 // q13.13"]
["11743859_x_at",-0.0036571026,0.003657341,0.08058548,-0.054152012,0.028261662,-0.086071014,0.5285057,0.21352078,1.0454923,0.06418242,1.0454923,"up","IL33",90865,"0002686 // negative regulation of leukocyte migration // inferred from electronic annotation /// 0002826 // negative regulation of T-helper 1 type immune response // inferred from electronic annotation /// 0002830 // positive regulation of type 2 immune response // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0032689 // negative regulation of interferon-gamma production // inferred from electronic annotation /// 0032736 // positive regulation of interleukin-13 production // inferred from electronic annotation /// 0032753 // positive regulation of interleukin-4 production // inferred from electronic annotation /// 0032754 // positive regulation of interleukin-5 production // inferred from electronic annotation /// 0032755 // positive regulation of interleukin-6 production // inferred from electronic annotation /// 0043032 // positive regulation of macrophage activation // inferred from direct assay /// 0043032 // positive regulation of macrophage activation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred from sequence or structural similarity /// 0050729 // positive regulation of inflammatory response // inferred from electronic annotation /// 0051024 // positive regulation of immunoglobulin secretion // inferred from electronic annotation /// 0051025 // negative regulation of immunoglobulin secretion // inferred from electronic annotation /// 0090197 // positive regulation of chemokine secretion // inferred from direct assay /// 0090197 // positive regulation of chemokine secretion // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0005125 // cytokine activity // inferred from direct assay /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr9:6215776-6257982 (+) // 99.19 // p24.1"]
["11736872_a_at",-0.051013947,-0.17006302,0.06963539,-0.16248322,0.051013947,0.16495895,0.82777303,0.59463245,-1.048488,-0.06831038,1.048488,"down","TRPC6",7225,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // traceable author statement /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0032236 // positive regulation of calcium ion transport via store-operated calcium channel activity // inferred from direct assay /// 0032414 // positive regulation of ion transmembrane transporter activity // inferred from direct assay /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0036057 // slit diaphragm // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005261 // cation channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015279 // store-operated calcium channel activity // inferred from electronic annotation /// 0070679 // inositol 1,4,5 trisphosphate binding // inferred from direct assay","chr11:101322206-101454749 (-) // 98.35 // q22.1"]
["11737242_at",0.02362442,0.025339603,-0.02362442,-0.08676028,0.07795906,-0.025339603,0.88865453,0.7155137,1.0138378,0.01982688,1.0138378,"up","TMEM233",387890,"0009607 // response to biotic stimulus // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:120031263-120080654 (+) // 67.61 // q24.23"]
["11734467_at",-0.16295385,0.031698704,-0.10939121,0.038454056,-0.031698704,0.17954302,0.47128338,0.16946928,-1.1036747,-0.14231494,1.1036747,"down","FAM123B",139285,"0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0060828 // regulation of canonical Wnt receptor signaling pathway // inferred from mutant phenotype /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from mutant phenotype /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from direct assay /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from mutant phenotype /// 0008013 // beta-catenin binding // inferred from direct assay /// 0008289 // lipid binding // inferred from electronic annotation","chrX:63404996-63425624 (-) // 96.65 // q11.2"]
["11751541_a_at",-0.045390606,-0.08717871,0.07250881,-0.07774162,0.067744255,0.045390606,0.85901827,0.6540618,-1.0222995,-0.031817958,1.0222995,"down","PDCD1",5133,"0006915 // apoptotic process // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006959 // humoral immune response // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0031295 // T cell costimulation // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr2:242792953-242795134 (-) // 70.07 // q37.3"]
["11762758_x_at",-0.122674465,0.025892258,0.02229309,-0.022292614,-0.07761192,0.12222338,0.88003296,0.69702303,-1.0226194,-0.032269254,1.0226194,"down","BAIAP2",10458,"0007165 // signal transduction // inferred from electronic annotation /// 0007409 // axonogenesis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0009617 // response to bacterium // inferred from mutant phenotype /// 0016358 // dendrite development // inferred from electronic annotation /// 0032956 // regulation of actin cytoskeleton organization // inferred from mutant phenotype /// 0046847 // filopodium assembly // inferred from electronic annotation /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0051017 // actin filament bundle assembly // inferred from electronic annotation","0001726 // ruffle // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0030175 // filopodium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // traceable author statement /// 0008093 // cytoskeletal adaptor activity // inferred from electronic annotation /// 0008093 // cytoskeletal adaptor activity // traceable author statement /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0070064 // proline-rich region binding // inferred from direct assay","chr17:79071917-79082627 (+) // 99.86 // q25.3"]
["11752122_a_at",0.18244267,-0.20881796,-0.06184721,0.21933031,-0.034413815,0.034413815,0.7690055,0.49577883,-1.0736455,-0.10251768,1.0736455,"down","RALGDS",5900,"0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005083 // small GTPase regulator activity // inferred from direct assay /// 0005083 // small GTPase regulator activity // non-traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation","chr9:135973746-136006504 (-) // 94.11 // q34.2"]
["11746035_a_at",0.04324293,0.051089287,0.03439045,-0.14432955,-0.03439045,-0.106012344,0.13304369,0.013364973,1.1002401,0.1378184,1.1002401,"up","CCDC75",253635,"","","0003676 // nucleic acid binding // inferred from electronic annotation","chr2:37311654-37326352 (+) // 63.85 // p22.2"]
["11728051_at",0.26253653,-0.04198265,0.31144905,-0.10315037,0.017277718,-0.017277718,0.43432102,0.14258426,1.1580663,0.21171781,1.1580663,"up","FAM126B",285172,"","0005622 // intracellular // inferred from direct assay","","chr2:201838441-201936392 (-) // 89.74 // q33.1"]
["11747636_a_at",-0.027542114,0.24867964,0.026272297,-0.026272297,-0.0816288,0.33649874,0.9896643,0.96986616,1.004356,0.00627077,1.004356,"up","PLA2G6",8398,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0032049 // cardiolipin biosynthetic process // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0004623 // phospholipase A2 activity // traceable author statement /// 0004623 // phospholipase A2 activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0047499 // calcium-independent phospholipase A2 activity // inferred from electronic annotation","chr22:38519210-38577837 (-) // 90.07 // q13.1"]
["11719777_at",0.2685671,-0.02480793,-0.026012897,0.5497761,0.02480793,-0.032444,0.8482234,0.6331175,-1.0778311,-0.108131185,1.0778311,"down","NDST1",3340,"0000165 // MAPK cascade // inferred from electronic annotation /// 0000271 // polysaccharide biosynthetic process // inferred from electronic annotation /// 0006477 // protein sulfation // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007224 // smoothened signaling pathway // inferred from electronic annotation /// 0007585 // respiratory gaseous exchange // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0015012 // heparan sulfate proteoglycan biosynthetic process // inferred from electronic annotation /// 0015012 // heparan sulfate proteoglycan biosynthetic process // traceable author statement /// 0030203 // glycosaminoglycan metabolic process // inferred from electronic annotation /// 0030210 // heparin biosynthetic process // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0030901 // midbrain development // inferred from electronic annotation /// 0048702 // embryonic neurocranium morphogenesis // inferred from electronic annotation /// 0048703 // embryonic viscerocranium morphogenesis // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0008146 // sulfotransferase activity // inferred from electronic annotation /// 0015016 // [heparan sulfate]-glucosamine N-sulfotransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019213 // deacetylase activity // inferred from electronic annotation","chr5:149887673-149937772 (+) // 84.54 // q33.1"]
["11761718_at",-0.21066928,0.044775963,0.0641036,-0.109612465,-0.0447762,0.26827645,0.8565046,0.64924073,-1.0510945,-0.071892425,1.0510945,"down",0.044775963,0.0641036,"TMEM135",65084,"0007031 // peroxisome organization // inferred from sequence or structural similarity","0005777 // peroxisome // inferred from sequence or structural similarity /// 0005777 // peroxisome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation"]
["11762655_at",0.029898405,-0.14094758,-0.13181353,0.09573555,-0.029898643,0.086806774,0.4106333,0.12733813,-1.0956868,-0.13183546,1.0956868,"down","RSPH10B2",728194,"0016310 // phosphorylation // inferred from electronic annotation","","0016301 // kinase activity // inferred from electronic annotation","chr7:6800944-6836561 (+) // 97.58 // p22.1 /// chr7:5967662-6003113 (-) // 97.58 // p22.1"]
["11763292_at",-0.04017496,0.049146652,-0.030382633,0.030382633,-0.10728741,0.053240776,0.99624574,0.99021524,1.0005207,0.0007510247,1.0005207,"up","ENDOV /// LOC100507440","100507440 /// 284131","0006281 // DNA repair // inferred from sequence or structural similarity /// 0006281 // DNA repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","","0000287 // magnesium ion binding // inferred from sequence or structural similarity /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016888 // endodeoxyribonuclease activity, producing 5'-phosphomonoesters // inferred from sequence or structural similarity /// 0016888 // endodeoxyribonuclease activity, producing 5'-phosphomonoesters // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:78389114-78404173 (+) // 98.24 // q25.3"]
["11757395_s_at",0.28101635,0.018058777,-0.018058777,0.27843475,-0.018500328,-0.13820076,0.90545434,0.75015503,1.0374877,0.053094294,1.0374877,"up","MCM3AP",8888,"0006260 // DNA replication // traceable author statement /// 0006606 // protein import into nucleus // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement","chr21:47653638-47656818 (-) // 59.93 // q22.3"]
["11738129_x_at",-0.087154865,0.13590384,-0.060830593,-0.35076427,0.060830593,0.26564026,0.9943249,0.9842995,1.0028255,0.0040705847,1.0028255,"up","SARDH",1757,"0006546 // glycine catabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0005759 // mitochondrial matrix // non-traceable author statement","0004047 // aminomethyltransferase activity // inferred from electronic annotation /// 0008480 // sarcosine dehydrogenase activity // inferred from electronic annotation /// 0008480 // sarcosine dehydrogenase activity // traceable author statement /// 0009055 // electron carrier activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation","chr9:136528685-136603512 (-) // 96.88 // q34.2"]
["11759569_a_at",0.11130428,0.012927532,-0.013719559,-0.012927055,0.14810467,-0.11272001,0.9038464,0.7471509,1.0205534,0.029351601,1.0205534,"up","CDK5RAP3",80279,"0000079 // regulation of cyclin-dependent protein kinase activity // inferred from sequence or structural similarity /// 0007420 // brain development // non-traceable author statement /// 0045664 // regulation of neuron differentiation // non-traceable author statement","","0005515 // protein binding // inferred from physical interaction","chr17:46048487-46059138 (+) // 90.95 // q21.32"]
["11753054_at",-0.012791157,0.081641436,-0.16219497,0.012791157,0.17313266,-0.13864827,0.88334584,0.7035663,-1.0330237,-0.046873372,1.0330237,"down","LOC643797",643797,"","0005576 // extracellular region // inferred from electronic annotation","","chr15:93257423-93258687 (+) // 77.08 // q26.1"]
["11736593_a_at",0.2029171,-0.13118386,-0.0048241615,0.03835249,-0.1337707,0.004823923,0.8620609,0.6601289,1.0370612,0.052501053,1.0370612,"up","LDB3",11155,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030018 // Z disc // inferred from electronic annotation /// 0031143 // pseudopodium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:88428320-88499197 (+) // 89.33 // q23.2"]
["11728461_a_at",0.026384354,-0.0061855316,0.022882462,-0.2148428,0.0061855316,-0.111424446,0.42194822,0.13457581,1.0875293,0.12105427,1.0875293,"up","CARD9 /// DNLZ","64170 /// 728489","0007249 // I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0009620 // response to fungus // inferred from electronic annotation /// 0032494 // response to peptidoglycan // inferred from electronic annotation /// 0032495 // response to muramyl dipeptide // inferred from electronic annotation /// 0032755 // positive regulation of interleukin-6 production // inferred from electronic annotation /// 0032760 // positive regulation of tumor necrosis factor production // inferred from electronic annotation /// 0032874 // positive regulation of stress-activated MAPK cascade // inferred from direct assay /// 0032874 // positive regulation of stress-activated MAPK cascade // inferred from electronic annotation /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0042534 // regulation of tumor necrosis factor biosynthetic process // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0043330 // response to exogenous dsRNA // inferred from electronic annotation /// 0045076 // regulation of interleukin-2 biosynthetic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045089 // positive regulation of innate immune response // inferred from electronic annotation /// 0045408 // regulation of interleukin-6 biosynthetic process // inferred from electronic annotation /// 0046330 // positive regulation of JNK cascade // inferred from direct assay /// 0046330 // positive regulation of JNK cascade // inferred from electronic annotation /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from electronic annotation /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050700 // CARD domain binding // inferred from physical interaction","chr9:139256352-139258263 (-) // 90.54 // q34.3"]
["11720031_a_at",0.2410469,0.13743687,-0.019992828,-0.0076122284,-0.280715,0.0076122284,0.44779843,0.15190426,1.1591511,0.2130686,1.1591511,"up","TRIM29",23650,"0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:119981994-120056148 (-) // 98.13 // q23.3"]
["11730802_at",-0.18630695,-0.20344973,-0.02714634,0.027145863,0.04382372,0.23260069,0.2574915,0.050084528,-1.1811218,-0.24015777,1.1811218,"down","CRNN",49860,"0009408 // response to heat // inferred from direct assay /// 0016337 // cell-cell adhesion // inferred from direct assay","0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay","0005509 // calcium ion binding // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation","chr1:152381719-152384724 (-) // 94.4 // q21.3"]
["11762314_a_at",-0.021517992,0.22834945,-0.061247826,-0.026355028,0.13799405,0.021517992,0.9896643,0.9698316,1.0028753,0.004142269,1.0028753,"up","C11orf74",119710,"","","","chr11:36616066-36669705 (+) // 66.44 // p12"]
["11729237_a_at",0.09925079,0.045228958,-0.009580612,0.009580612,-0.11748505,-0.010475159,0.47115746,0.16937631,1.060266,0.08442628,1.060266,"up","MCCC2",64087,"0006552 // leucine catabolic process // inferred from electronic annotation /// 0006552 // leucine catabolic process // traceable author statement /// 0009083 // branched chain family amino acid catabolic process // traceable author statement /// 0015936 // coenzyme A metabolic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004485 // methylcrotonoyl-CoA carboxylase activity // non-traceable author statement /// 0004485 // methylcrotonoyl-CoA carboxylase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation","chr5:70883114-70954528 (+) // 64.5 // q13.2"]
["11761520_x_at",0.006930828,0.042166233,-0.010744095,0.0942564,-0.042166233,-0.006930828,0.98678076,0.9611236,-1.0015738,-0.0022687302,1.0015738,"down","ZNF587B",100293516,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:58341661-58353164 (+) // 86.42 // q13.43"]
["11738236_a_at",0.11906052,-0.10455036,-0.111750126,-0.120607376,0.11247349,0.10455036,0.8196833,0.5808966,-1.0457603,-0.06455217,1.0457603,"down","LOC100507472 /// PCSK6","100507472 /// 5046","0006508 // proteolysis // inferred from electronic annotation /// 0007354 // zygotic determination of anterior/posterior axis, embryo // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0009100 // glycoprotein metabolic process // inferred from direct assay /// 0016485 // protein processing // inferred from direct assay /// 0016486 // peptide hormone processing // inferred from direct assay /// 0030510 // regulation of BMP signaling pathway // traceable author statement /// 0032455 // nerve growth factor processing // traceable author statement /// 0032902 // nerve growth factor production // inferred from direct assay /// 0032940 // secretion by cell // inferred from direct assay /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005625 // soluble fraction // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005796 // Golgi lumen // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay","0004175 // endopeptidase activity // inferred from direct assay /// 0004252 // serine-type endopeptidase activity // inferred from direct assay /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008201 // heparin binding // inferred from direct assay /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0043499 // eukaryotic cell surface binding // inferred from direct assay /// 0048406 // nerve growth factor binding // inferred from direct assay","chr15:101886922-102030187 (-) // 89.91 // q26.3"]
["11715711_a_at",-0.14299774,-0.0043792725,-0.025546074,0.004380226,0.13897038,0.14625072,0.30558464,0.071061626,-1.112785,-0.15417485,1.112785,"down","AKR1C3",8644,"0000060 // protein import into nucleus, translocation // inferred from direct assay /// 0006693 // prostaglandin metabolic process // inferred from expression pattern /// 0006693 // prostaglandin metabolic process // traceable author statement /// 0006693 // prostaglandin metabolic process // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007584 // response to nutrient // inferred from expression pattern /// 0008202 // steroid metabolic process // inferred from expression pattern /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008584 // male gonad development // inferred from expression pattern /// 0009267 // cellular response to starvation // inferred from expression pattern /// 0010942 // positive regulation of cell death // inferred from direct assay /// 0016488 // farnesol catabolic process // inferred from direct assay /// 0030216 // keratinocyte differentiation // inferred from expression pattern /// 0034614 // cellular response to reactive oxygen species // inferred from direct assay /// 0034694 // response to prostaglandin stimulus // inferred from direct assay /// 0042448 // progesterone metabolic process // inferred from direct assay /// 0042574 // retinal metabolic process // inferred from direct assay /// 0044259 // multicellular organismal macromolecule metabolic process // inferred from expression pattern /// 0044597 // daunorubicin metabolic process // inferred from mutant phenotype /// 0044598 // doxorubicin metabolic process // inferred from mutant phenotype /// 0048385 // regulation of retinoic acid receptor signaling pathway // inferred from direct assay /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0061370 // testosterone biosynthetic process // inferred from mutant phenotype /// 0070293 // renal absorption // non-traceable author statement /// 0071276 // cellular response to cadmium ion // inferred from direct assay /// 0071277 // cellular response to calcium ion // inferred from direct assay /// 0071379 // cellular response to prostaglandin stimulus // inferred from direct assay /// 0071384 // cellular response to corticosteroid stimulus // inferred from direct assay /// 0071395 // cellular response to jasmonic acid stimulus // inferred from direct assay /// 1900053 // negative regulation of retinoic acid biosynthetic process // inferred from direct assay /// 2000224 // regulation of testosterone biosynthetic process // inferred from mutant phenotype /// 2000353 // positive regulation of endothelial cell apoptotic process // inferred from direct assay /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from direct assay","0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0001758 // retinal dehydrogenase activity // inferred from direct assay /// 0004032 // alditol:NADP+ 1-oxidoreductase activity // inferred from direct assay /// 0004033 // aldo-keto reductase (NADP) activity // traceable author statement /// 0004745 // retinol dehydrogenase activity // inferred from direct assay /// 0004958 // prostaglandin F receptor activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016655 // oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor // inferred from direct assay /// 0018636 // phenanthrene 9,10-monooxygenase activity // inferred from direct assay /// 0035410 // dihydrotestosterone 17-beta-dehydrogenase activity // inferred from direct assay /// 0036131 // prostaglandin D2 11-ketoreductase activity // inferred from electronic annotation /// 0045550 // geranylgeranyl reductase activity // inferred from direct assay /// 0045703 // ketoreductase activity // inferred from direct assay /// 0047017 // prostaglandin-F synthase activity // inferred from electronic annotation /// 0047020 // 15-hydroxyprostaglandin-D dehydrogenase (NADP+) activity // inferred from direct assay /// 0047023 // androsterone dehydrogenase activity // inferred from direct assay /// 0047026 // androsterone dehydrogenase (A-specific) activity // inferred from electronic annotation /// 0047045 // testosterone 17-beta-dehydrogenase (NADP+) activity // inferred from electronic annotation /// 0047086 // ketosteroid monooxygenase activity // inferred from direct assay /// 0047115 // trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity // inferred from electronic annotation /// 0047718 // indanol dehydrogenase activity // inferred from electronic annotation /// 0047787 // delta4-3-oxosteroid 5beta-reductase activity // inferred from direct assay /// 0050327 // testosterone 17-beta-dehydrogenase (NAD+) activity // inferred from electronic annotation","chr10:5135984-5149878 (+) // 93.02 // p15.1"]
["11729708_a_at",-0.35218143,0.022471428,-0.022471428,0.040344715,-0.05827284,0.026247978,0.6873203,0.38059914,-1.0868608,-0.12016714,1.0868608,"down","CSMD1",64478,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr8:2792875-4852399 (-) // 98.75 // p23.2"]
["11756883_s_at",-0.060679436,-0.083636284,-0.01173687,0.14124012,0.057559967,0.01173687,0.25184774,0.04816693,-1.0883907,-0.12219654,1.0883907,"down","PRRC2C",23215,"","","0008022 // protein C-terminus binding // inferred from physical interaction","chr1:171510968-171562649 (+) // 88.42 // q24.3"]
["11732369_a_at",-0.0005197525,-0.13989282,0.0005195141,0.04395461,-0.021398306,0.09525752,0.5239341,0.20992817,-1.0613513,-0.08590226,1.0613513,"down","FGF14",2259,"0007165 // signal transduction // traceable author statement /// 0007254 // JNK cascade // inferred from physical interaction /// 0007267 // cell-cell signaling // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation","0005104 // fibroblast growth factor receptor binding // inferred from direct assay /// 0008083 // growth factor activity // inferred from electronic annotation /// 0008083 // growth factor activity // traceable author statement /// 0008201 // heparin binding // inferred from direct assay","chr13:102373204-103054267 (-) // 99.27 // q33.1"]
["11732274_at",-0.07115126,0.15607595,0.29786015,-0.17271566,-0.16432333,0.07115126,0.4881524,0.18174154,1.1616893,0.21622424,1.1616893,"up","ELMOD2",255520,"0006909 // phagocytosis // inferred from electronic annotation /// 0009615 // response to virus // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from direct assay /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0050688 // regulation of defense response to virus // inferred from direct assay","0005856 // cytoskeleton // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from direct assay /// 0005096 // GTPase activator activity // inferred from electronic annotation","chr4:141445311-141474924 (+) // 96.67 // q31.1"]
["11735900_s_at",0.034900904,0.16388893,-0.109164,0.039839745,-0.1873169,-0.034901142,0.72383255,0.42997688,1.0648632,0.09066811,1.0648632,"up","HS3ST4",9951,"0030201 // heparan sulfate proteoglycan metabolic process // non-traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005576 // extracellular region // non-traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008146 // sulfotransferase activity // inferred from electronic annotation /// 0008467 // [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity // non-traceable author statement /// 0008467 // [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr16:25703346-26149006 (+) // 87.63 // p12.1"]
["11754695_a_at",-0.0382061,0.0382061,0.08313751,-0.22002983,-0.05226946,0.29171658,0.9633896,0.8974473,1.0148314,0.021240097,1.0148314,"up","PLA2G5",5322,"0006644 // phospholipid metabolic process // traceable author statement /// 0006644 // phospholipid metabolic process // inferred from electronic annotation /// 0006663 // platelet activating factor biosynthetic process // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0019370 // leukotriene biosynthetic process // inferred from electronic annotation /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0050482 // arachidonic acid secretion // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0004623 // phospholipase A2 activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047498 // calcium-dependent phospholipase A2 activity // inferred from electronic annotation /// 0047498 // calcium-dependent phospholipase A2 activity // traceable author statement","chr1:20395363-20417683 (+) // 54.75 // p36.13"]
["11744793_x_at",0.018620491,0.01289463,-0.018683434,0.07929897,-0.01289463,-0.0711689,0.9653012,0.9032543,1.0040739,0.0058653955,1.0040739,"up","DLGAP5",9787,"0000087 // M phase of mitotic cell cycle // inferred from direct assay /// 0000087 // M phase of mitotic cell cycle // inferred from sequence or structural similarity /// 0007049 // cell cycle // inferred from electronic annotation /// 0007079 // mitotic chromosome movement towards spindle pole // non-traceable author statement /// 0007267 // cell-cell signaling // inferred from electronic annotation /// 0008283 // cell proliferation // non-traceable author statement /// 0045842 // positive regulation of mitotic metaphase/anaphase transition // non-traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0031616 // spindle pole centrosome // inferred from direct assay /// 0031616 // spindle pole centrosome // inferred from sequence or structural similarity","0004721 // phosphoprotein phosphatase activity // inferred from direct assay /// 0004721 // phosphoprotein phosphatase activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction","chr14:55614829-55658273 (-) // 96.8 // q22.3"]
["11732617_at",0.023751736,-0.019402504,0.019402504,-0.15920973,-0.056960583,0.12674665,0.871534,0.679336,1.0264939,0.037725065,1.0264939,"up","TTLL10",254173,"0006464 // cellular protein modification process // inferred from electronic annotation /// 0018094 // protein polyglycylation // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay","0004835 // tubulin-tyrosine ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0070735 // protein-glycine ligase activity // inferred from direct assay","chr1:1115077-1121241 (+) // 96.1 // p36.33"]
["11723790_a_at",-0.1260612,0.018929958,0.041690826,-0.0891037,-0.018929958,0.26358867,0.814873,0.5722175,-1.0523869,-0.073665164,1.0523869,"down","SNCB",6620,"0042417 // dopamine metabolic process // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0019717 // synaptosome // inferred from electronic annotation /// 0043195 // terminal button // inferred from electronic annotation /// 0043679 // axon terminus // inferred from electronic annotation","0004859 // phospholipase inhibitor activity // traceable author statement /// 0005509 // calcium ion binding // inferred from direct assay","chr5:176047082-176057557 (-) // 88.92 // q35.2"]
["11732101_at",0.14474964,-0.07853985,-0.07101059,-0.16085815,0.07101059,0.106658936,0.98335975,0.95150703,-1.005006,-0.0072040507,1.005006,"down","IQCF6",440956,"","","","chr3:51812576-51813203 (-) // 100.0 // p21.2"]
["11752348_a_at",-0.14731526,0.29406357,-0.17615366,-0.06733656,0.18417263,0.06733656,0.8788827,0.69458073,-1.0505848,-0.07119261,1.0505848,"down","TBC1D30",23329,"0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005097 // Rab GTPase activator activity // inferred from electronic annotation","chr12:65218446-65270940 (+) // 95.68 // q14.3"]
["11763278_s_at",-0.10582161,-0.18961525,-0.16012669,0.10582161,0.34016418,0.14704227,0.11724536,0.010169217,-1.274146,-0.34953055,1.274146,"down","FGFR1OP2",26127,"0009611 // response to wounding // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","","chr12:27091412-27119580 (+) // 96.5 // p11.23"]
["11728277_x_at",-0.004473686,0.004473686,-0.027002335,0.008054733,-0.1268959,0.022672653,0.8618478,0.6594436,1.0161091,0.023055326,1.0161091,"up","PLA2G12A",81579,"0006644 // phospholipid metabolic process // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation","0004623 // phospholipase A2 activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047498 // calcium-dependent phospholipase A2 activity // non-traceable author statement","chr4:110630696-110651236 (-) // 67.74 // q25"]
["11727469_x_at",0.016321182,0.080724,0.032957554,-0.016321182,-0.10413051,-0.033868074,0.24481721,0.04557828,1.0678983,0.094774224,1.0678983,"up","MAGEA4",4103,"","","0005515 // protein binding // inferred from physical interaction","chrX:151080980-151093642 (+) // 97.54 // q28"]
["11725580_at",-0.04597664,0.16359282,-0.012759209,-0.023918152,0.091198444,0.012759209,0.9699344,0.91565,1.0057505,0.008272508,1.0057505,"up","BEND3",57673,"","","","chr6:107386383-107435636 (-) // 98.39 // q21"]
["11752450_a_at",-0.3475976,0.031137466,-0.11745286,-0.031137466,0.08779168,0.348799,0.44517893,0.14981697,-1.214017,-0.27978867,1.214017,"down","UNC13B",10497,"0006887 // exocytosis // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007588 // excretion // traceable author statement /// 0016081 // synaptic vesicle docking involved in exocytosis // inferred from electronic annotation /// 0016082 // synaptic vesicle priming // inferred from electronic annotation /// 0035249 // synaptic transmission, glutamatergic // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0048172 // regulation of short-term neuronal synaptic plasticity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0004871 // signal transducer activity // traceable author statement /// 0004872 // receptor activity // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:35162019-35377692 (+) // 94.3 // p13.3"]
["11723287_at",-0.30958748,-0.033353806,0.033353806,-0.149333,0.06785631,0.17721844,0.6992246,0.39593625,-1.0981764,-0.13510975,1.0981764,"down","TYROBP",7305,"0002281 // macrophage activation involved in immune response // inferred from electronic annotation /// 0002283 // neutrophil activation involved in immune response // inferred from electronic annotation /// 0006968 // cellular defense response // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0035556 // intracellular signal transduction // traceable author statement /// 0050776 // regulation of immune response // traceable author statement","0005622 // intracellular // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005057 // receptor signaling protein activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction","chr19:36395299-36399202 (-) // 87.05 // q13.12"]
["11752068_a_at",-0.026839256,0.016624928,-0.016624928,0.19274282,-0.06399441,0.14645004,0.5974828,0.2770925,-1.0722781,-0.10067918,1.0722781,"down","UBAP2",55833,"","","","chr9:33922308-34048885 (-) // 99.9 // p13.3"]
["11717492_x_at",0.20918941,0.012641907,-0.0679512,0.18882751,-0.05264187,-0.012641907,0.97607726,0.93189245,1.0070338,0.010112142,1.0070338,"up","DYNLRB1",83658,"0006810 // transport // inferred from electronic annotation /// 0007018 // microtubule-based movement // non-traceable author statement /// 0007632 // visual behavior // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005868 // cytoplasmic dynein complex // inferred from sequence or structural similarity /// 0005868 // cytoplasmic dynein complex // non-traceable author statement /// 0005868 // cytoplasmic dynein complex // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0030286 // dynein complex // inferred from electronic annotation","0003774 // motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from electronic annotation","chr20:33104226-33128762 (+) // 75.48 // q11.22"]
["11757432_s_at",0.16325665,0.0078315735,-0.0078315735,0.05932522,-0.13524723,-0.20654011,0.50920284,0.19814615,1.1084725,0.14857294,1.1084725,"up","EBAG9",9166,"0001558 // regulation of cell growth // non-traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0016505 // apoptotic protease activator activity // non-traceable author statement","chr8:110576418-110577389 (+) // 77.96 // q23.2"]
["11741870_a_at",-0.005168438,0.3088975,-0.09943485,0.005168438,0.23402548,-0.016341686,0.9892214,0.9684835,-1.004297,-0.006186005,1.004297,"down","PARK2",5071,"0000209 // protein polyubiquitination // inferred from direct assay /// 0000422 // mitochondrion degradation // inferred from mutant phenotype /// 0001933 // negative regulation of protein phosphorylation // inferred from direct assay /// 0001963 // synaptic transmission, dopaminergic // inferred from electronic annotation /// 0001964 // startle response // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0006513 // protein monoubiquitination // inferred from direct assay /// 0006914 // autophagy // inferred from electronic annotation /// 0007417 // central nervous system development // traceable author statement /// 0007612 // learning // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0008219 // cell death // inferred from direct assay /// 0008219 // cell death // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0010506 // regulation of autophagy // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0019538 // protein metabolic process // inferred from electronic annotation /// 0032232 // negative regulation of actin filament bundle assembly // inferred from direct assay /// 0035249 // synaptic transmission, glutamatergic // inferred from electronic annotation /// 0042415 // norepinephrine metabolic process // inferred from electronic annotation /// 0042417 // dopamine metabolic process // inferred from electronic annotation /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from direct assay /// 0043524 // negative regulation of neuron apoptotic process // inferred from direct assay /// 0043526 // neuroprotection // inferred from direct assay /// 0046928 // regulation of neurotransmitter secretion // inferred from electronic annotation /// 0050804 // regulation of synaptic transmission // inferred from electronic annotation /// 0051583 // dopamine uptake involved in synaptic transmission // inferred from electronic annotation /// 0051865 // protein autoubiquitination // inferred from direct assay /// 0060548 // negative regulation of cell death // inferred from direct assay /// 0070534 // protein K63-linked ubiquitination // inferred from direct assay /// 0070842 // aggresome assembly // inferred from mutant phenotype /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay /// 0070997 // neuron death // inferred from direct assay /// 0090201 // negative regulation of release of cytochrome c from mitochondria // inferred from direct assay /// 2000377 // regulation of reactive oxygen species metabolic process // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from mutant phenotype /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0016235 // aggresome // inferred from direct assay /// 0043005 // neuron projection // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0019900 // kinase binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0030165 // PDZ domain binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from physical interaction","chr6:161768455-163148834 (-) // 91.17 // q26"]
["11750503_a_at",0.18666649,0.025044441,0.25694132,-0.025044441,-0.2992196,-0.19657993,0.21507867,0.035208546,1.256867,0.32983205,1.256867,"up","TM9SF4",9777,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr20:30697530-30734652 (+) // 92.01 // q11.21"]
["11762178_at",0.0034313202,0.22020078,-0.10723376,-0.116140604,-0.0034310818,0.23672962,0.9993071,0.99865973,-1.0001755,-0.00025313624,1.0001755,"down","CD3G",917,"0006461 // protein complex assembly // non-traceable author statement /// 0007163 // establishment or maintenance of cell polarity // inferred from mutant phenotype /// 0007166 // cell surface receptor signaling pathway // inferred from mutant phenotype /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0015031 // protein transport // inferred from mutant phenotype /// 0031295 // T cell costimulation // traceable author statement /// 0042110 // T cell activation // non-traceable author statement /// 0042981 // regulation of apoptotic process // inferred from mutant phenotype /// 0050776 // regulation of immune response // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042101 // T cell receptor complex // non-traceable author statement /// 0042105 // alpha-beta T cell receptor complex // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from mutant phenotype /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0030159 // receptor signaling complex scaffold activity // non-traceable author statement /// 0042608 // T cell receptor binding // non-traceable author statement /// 0046982 // protein heterodimerization activity // inferred from physical interaction","chr11:118215074-118223864 (+) // 80.85 // q23.3"]
["11730544_a_at",-0.46023846,-0.071243286,0.071243286,0.09912968,-0.12254524,0.078866005,0.68579453,0.37882403,-1.1265383,-0.17189632,1.1265383,"down","ATPAF1-AS1",374973,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:47137499-47139254 (+) // 96.61 // p33"]
["11715531_at",0.2987547,-0.12015438,-0.15515041,0.29358578,0.026857376,-0.026857376,0.8499412,0.63641787,-1.0644037,-0.09004536,1.0644037,"down","PRPF8",10594,"0000375 // RNA splicing, via transesterification reactions // traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred from electronic annotation /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005682 // U5 snRNP // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr17:1553922-1588115 (-) // 61.34 // p13.3"]
["11759070_s_at",-0.03989649,0.016115189,-0.016115189,0.0960083,0.0984025,-0.02685833,0.50445485,0.19461264,-1.0490981,-0.069149636,1.0490981,"down","ZNF551",90233,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:58193346-58201745 (+) // 81.53 // q13.43"]
["11730514_at",-0.002024889,0.002024889,-0.14851761,-0.00506258,0.002024889,0.2000544,0.55865014,0.23984294,-1.0831088,-0.115178145,1.0831088,"down","C16orf78",123970,"","","","chr16:49407718-49433341 (+) // 97.37 // q12.1"]
["11716963_a_at",0.008313179,0.057142258,-0.079649925,0.12726974,-0.06457996,-0.008313179,0.90922743,0.75906974,-1.0159695,-0.022857113,1.0159695,"down","PPM1F",9647,"0006469 // negative regulation of protein kinase activity // inferred from direct assay /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0010634 // positive regulation of epithelial cell migration // inferred from mutant phenotype /// 0010811 // positive regulation of cell-substrate adhesion // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0033137 // negative regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0035690 // cellular response to drug // inferred from direct assay /// 0035970 // peptidyl-threonine dephosphorylation // inferred from direct assay /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0044387 // negative regulation of protein kinase activity by regulation of protein phosphorylation // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045927 // positive regulation of growth // inferred from mutant phenotype /// 0050921 // positive regulation of chemotaxis // inferred from mutant phenotype /// 0051496 // positive regulation of stress fiber assembly // inferred from direct assay /// 0051496 // positive regulation of stress fiber assembly // inferred from mutant phenotype /// 0051894 // positive regulation of focal adhesion assembly // inferred from mutant phenotype /// 0097193 // intrinsic apoptotic signaling pathway // inferred from direct assay","0005829 // cytosol // inferred from direct assay /// 0008287 // protein serine/threonine phosphatase complex // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0003824 // catalytic activity // inferred from electronic annotation /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // inferred from direct assay /// 0004722 // protein serine/threonine phosphatase activity // inferred from mutant phenotype /// 0004722 // protein serine/threonine phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from direct assay /// 0033192 // calmodulin-dependent protein phosphatase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr22:22273805-22307250 (-) // 98.2 // q11.22"]
["11759463_at",-0.041866302,-0.11998272,0.14816523,-0.43621254,0.041866302,0.19274807,0.91518354,0.77583945,1.0443738,0.062638104,1.0443738,"up","ADAMTS20",80070,"0006508 // proteolysis // inferred from electronic annotation /// 0009967 // positive regulation of signal transduction // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045636 // positive regulation of melanocyte differentiation // inferred from electronic annotation /// 0048070 // regulation of developmental pigmentation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0031012 // extracellular matrix // traceable author statement /// 0031012 // extracellular matrix // inferred from electronic annotation","0004175 // endopeptidase activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:43747668-43945724 (-) // 99.62 // q12"]
["11764274_s_at",-0.12176037,0.23327589,0.11483765,-0.205405,-0.08746481,0.08746481,0.6603578,0.3453459,1.1049027,0.14391938,1.1049027,"up",-0.205405,-0.08746481,0.08746481,-0.12176037,0.23327589,0.11483765]
["11730650_at",0.051092625,0.07393718,0.054088116,-0.5622177,-0.051092625,-0.10903931,0.42528114,0.13674779,1.2315619,0.30048913,1.2315619,"up","ANO3",63982,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0034707 // chloride channel complex // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from electronic annotation","chr11:26352970-26684836 (+) // 96.81 // p14.2"]
["11720340_a_at",0.11397886,-0.0054216385,-0.29327536,-0.11987209,0.02914238,0.0054211617,0.9298869,0.81053305,-1.0232342,-0.033136457,1.0232342,"down","STX1A",6804,"0001956 // positive regulation of neurotransmitter secretion // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // traceable author statement /// 0009629 // response to gravity // inferred from electronic annotation /// 0014047 // glutamate secretion // traceable author statement /// 0016081 // synaptic vesicle docking involved in exocytosis // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0017156 // calcium ion-dependent exocytosis // inferred from electronic annotation /// 0017157 // regulation of exocytosis // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045921 // positive regulation of exocytosis // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030141 // secretory granule // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042641 // actomyosin // inferred from electronic annotation /// 0043005 // neuron projection // inferred from direct assay /// 0043005 // neuron projection // inferred from electronic annotation /// 0043229 // intracellular organelle // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0070032 // synaptobrevin 2-SNAP-25-syntaxin-1a-complexin I complex // inferred from electronic annotation /// 0070044 // synaptobrevin 2-SNAP-25-syntaxin-1a complex // inferred from electronic annotation","0000149 // SNARE binding // inferred from electronic annotation /// 0001948 // glycoprotein binding // inferred from electronic annotation /// 0005484 // SNAP receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017022 // myosin binding // inferred from electronic annotation /// 0019855 // calcium channel inhibitor activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0030674 // protein binding, bridging // inferred from electronic annotation /// 0032028 // myosin head/neck binding // inferred from electronic annotation /// 0043008 // ATP-dependent protein binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from electronic annotation /// 0048306 // calcium-dependent protein binding // inferred from electronic annotation","chr7:73113536-73133999 (-) // 94.63 // q11.23"]
["11729927_a_at",-0.06853914,-0.13514471,0.06713581,0.13941622,-0.020948887,0.020948887,0.61522955,0.29535472,-1.065838,-0.09198815,1.065838,"down","ZNF510",22869,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:99517931-99540369 (-) // 64.66 // q22.33"]
["11747575_a_at",0.14361477,-0.3706684,-0.1076622,0.019306183,-0.019306183,0.13502789,0.68058056,0.37105256,-1.1146426,-0.15658122,1.1146426,"down","SORBS3",10174,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0031589 // cell-substrate adhesion // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0051495 // positive regulation of cytoskeleton organization // non-traceable author statement /// 0051496 // positive regulation of stress fiber assembly // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0017166 // vinculin binding // inferred from physical interaction","chr8:22409460-22432561 (+) // 96.16 // p21.3"]
["11741425_a_at",0.07068944,0.053801537,-0.13755465,-0.20427132,-0.05343032,0.05343032,0.80752915,0.5594293,1.0451688,0.0637359,1.0451688,"up","MRO",83876,"","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation","","chr18:48321490-48351754 (-) // 74.17 // q21.2"]
["11753550_a_at",-0.08051133,0.09028244,0,0,-0.1621399,0,0.7559901,0.4773338,1.0405192,0.057303637,1.0405192,"up","LINC00189",193629,"","","","chr21:30565800-30660526 (+) // 60.69 // q21.3"]
["11728104_at",0.035557985,-0.035557747,0.30273867,0.21263361,-0.093076944,-0.063822985,0.826541,0.5924757,1.0587302,0.08233505,1.0587302,"up","HTR2B",3357,"0001755 // neural crest cell migration // inferred from sequence or structural similarity /// 0001755 // neural crest cell migration // inferred from electronic annotation /// 0001819 // positive regulation of cytokine production // inferred from direct assay /// 0001938 // positive regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001938 // positive regulation of endothelial cell proliferation // inferred from electronic annotation /// 0002031 // G-protein coupled receptor internalization // inferred from mutant phenotype /// 0002031 // G-protein coupled receptor internalization // inferred from electronic annotation /// 0003007 // heart morphogenesis // inferred from sequence or structural similarity /// 0003007 // heart morphogenesis // inferred from electronic annotation /// 0003300 // cardiac muscle hypertrophy // inferred from sequence or structural similarity /// 0003300 // cardiac muscle hypertrophy // inferred from electronic annotation /// 0006182 // cGMP biosynthetic process // inferred from direct assay /// 0006661 // phosphatidylinositol biosynthetic process // inferred from mutant phenotype /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from mutant phenotype /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from sequence or structural similarity /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007210 // serotonin receptor signaling pathway // inferred from direct assay /// 0007210 // serotonin receptor signaling pathway // inferred from mutant phenotype /// 0007210 // serotonin receptor signaling pathway // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0010507 // negative regulation of autophagy // inferred from mutant phenotype /// 0014033 // neural crest cell differentiation // inferred from sequence or structural similarity /// 0014033 // neural crest cell differentiation // inferred from electronic annotation /// 0014065 // phosphatidylinositol 3-kinase cascade // inferred from mutant phenotype /// 0014827 // intestine smooth muscle contraction // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from mutant phenotype /// 0019722 // calcium-mediated signaling // inferred from mutant phenotype /// 0032320 // positive regulation of Ras GTPase activity // inferred from sequence or structural similarity /// 0032320 // positive regulation of Ras GTPase activity // inferred from electronic annotation /// 0042310 // vasoconstriction // inferred from mutant phenotype /// 0042493 // response to drug // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from sequence or structural similarity /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0048598 // embryonic morphogenesis // inferred from sequence or structural similarity /// 0048598 // embryonic morphogenesis // inferred from electronic annotation /// 0050715 // positive regulation of cytokine secretion // inferred from sequence or structural similarity /// 0050715 // positive regulation of cytokine secretion // inferred from electronic annotation /// 0050795 // regulation of behavior // inferred from mutant phenotype /// 0050795 // regulation of behavior // inferred from electronic annotation /// 0051000 // positive regulation of nitric-oxide synthase activity // inferred from direct assay /// 0051209 // release of sequestered calcium ion into cytosol // inferred from direct assay /// 0051209 // release of sequestered calcium ion into cytosol // inferred from mutant phenotype /// 0051781 // positive regulation of cell division // inferred from sequence or structural similarity /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0060548 // negative regulation of cell death // inferred from mutant phenotype /// 0070371 // ERK1 and ERK2 cascade // inferred from mutant phenotype /// 0070371 // ERK1 and ERK2 cascade // inferred from electronic annotation /// 0070528 // protein kinase C signaling cascade // inferred from mutant phenotype /// 0070588 // calcium ion transmembrane transport // inferred from mutant phenotype /// 0071277 // cellular response to calcium ion // inferred from mutant phenotype /// 0071502 // cellular response to temperature stimulus // inferred from sequence or structural similarity /// 0071502 // cellular response to temperature stimulus // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0001965 // G-protein alpha-subunit binding // inferred from mutant phenotype /// 0004435 // phosphatidylinositol phospholipase C activity // inferred from direct assay /// 0004435 // phosphatidylinositol phospholipase C activity // inferred from mutant phenotype /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004993 // serotonin receptor activity // inferred from direct assay /// 0004993 // serotonin receptor activity // inferred from electronic annotation /// 0005099 // Ras GTPase activator activity // inferred from sequence or structural similarity /// 0005099 // Ras GTPase activator activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from mutant phenotype /// 0008144 // drug binding // inferred from direct assay /// 0008144 // drug binding // inferred from electronic annotation /// 0051378 // serotonin binding // inferred from direct assay /// 0051378 // serotonin binding // inferred from electronic annotation","chr2:231972943-231989824 (-) // 98.85 // q37.1"]
["11756178_s_at",0.1720047,0.10745239,0.16969013,-0.1094532,-0.10745239,-0.14334774,0.028111357,0.00036469678,1.2056408,0.26980013,1.2056408,"up","CMTM6",54918,"0006935 // chemotaxis // inferred from electronic annotation","0005615 // extracellular space // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation","chr3:32522803-32525037 (-) // 95.66 // p22.3"]
["AFFX-BkGr-GC10_at",0.039425373,0.037191868,0.025707245,-0.025707245,-0.048373222,-0.037302256,0.037180126,0.00079861947,1.0506161,0.07123566,1.0506161,"up",-0.025707245,-0.048373222,-0.037302256,0.039425373,0.037191868,0.025707245]
["11723535_at",0.0376029,0.24960423,-0.028101444,-0.020489693,0.020489693,-0.40815687,0.55625653,0.23739018,1.1666896,0.22242083,1.1666896,"up","PDGFRL",5157,"0035791 // platelet-derived growth factor receptor-beta signaling pathway // traceable author statement","0005576 // extracellular region // inferred from electronic annotation","0004992 // platelet activating factor receptor activity // traceable author statement /// 0005019 // platelet-derived growth factor beta-receptor activity // traceable author statement","chr8:17433941-17500641 (+) // 90.83 // p22"]
["11715376_a_at",0.11775398,-0.027175903,-0.06329155,0.050813675,0.02717495,-0.06384468,0.98296255,0.94983613,1.0030411,0.0043807914,1.0030411,"up","RPS11",6205,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // non-traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0019843 // rRNA binding // inferred from electronic annotation","chr19:49999691-50002946 (+) // 73.05 // q13.33"]
["11717698_a_at",0.12547874,0.03903103,0.11769295,-0.03903103,-0.14591122,-0.16888332,0.12682652,0.012049271,1.1583004,0.21200946,1.1583004,"up","ARIH1",25820,"0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement","0000151 // ubiquitin ligase complex // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019787 // small conjugating protein ligase activity // traceable author statement /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:72766666-72879692 (+) // 95.31 // q24.1"]
["11734518_at",-0.13411379,0.012328863,0.0011811256,-0.16309643,-0.0011811256,0.13341475,0.91493034,0.7749388,-1.020951,-0.029913671,1.020951,"down","PAGE2",203569,"","","","chrX:55115440-55119269 (+) // 97.5 // p11.21"]
["11724473_a_at",-0.29413414,0.01066041,0.073014736,-0.047791004,-0.010660648,0.36551285,0.68493336,0.37772858,-1.127015,-0.1725067,1.127015,"down","AMPH",273,"0006897 // endocytosis // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007612 // learning // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0045807 // positive regulation of endocytosis // inferred from electronic annotation /// 0048488 // synaptic vesicle endocytosis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0008021 // synaptic vesicle // traceable author statement /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043679 // axon terminus // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr7:38423301-38671167 (-) // 94.17 // p14.1"]
["11718880_at",0.05349636,0.015663147,-0.009483337,0.004043579,-0.004043579,-0.043642998,0.5316986,0.2165976,1.024159,0.034439646,1.024159,"up","ZCCHC14",23174,"0007154 // cell communication // inferred from electronic annotation","","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:87439588-87525825 (-) // 96.28 // q24.2"]
["11722586_a_at",0.11317825,-0.017156601,0.013195038,0.047639847,-0.013195038,-0.07360649,0.7029838,0.400968,1.0348771,0.049459394,1.0348771,"up","G3BP1",10146,"0006810 // transport // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // traceable author statement /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004003 // ATP-dependent DNA helicase activity // traceable author statement /// 0004004 // ATP-dependent RNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr5:151151470-151184915 (+) // 98.25 // q33.1"]
["11738032_x_at",-0.37180996,0.0040225983,0.5541239,-0.33426476,0.010958672,-0.0040225983,0.8242648,0.5885246,1.1260116,0.1712217,1.1260116,"up","FAM153C",653316,"","","","chr5:177435688-177474656 (+) // 88.58 // q35.3 /// chr5:175490073-175541588 (+) // 89.57 // q35.2 /// chr5:177150577-177208143 (-) // 97.25 // q35.3"]
["11732169_a_at",-0.27411652,0.10631609,-0.11836815,0.212636,-0.05927086,0.05927086,0.6073155,0.28738567,-1.1221521,-0.16626821,1.1221521,"down","PTPN7",5778,"0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0009898 // internal side of plasma membrane // inferred from direct assay","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr1:202116143-202130727 (-) // 96.67 // q32.1"]
["11716971_a_at",-0.0047154427,-0.02056551,-0.06863403,0.0047154427,0.10789251,0.092179775,0.27231756,0.056296747,-1.0714523,-0.09956757,1.0714523,"down","MRAS",22808,"0006184 // GTP catabolic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0007517 // muscle organ development // traceable author statement /// 0030036 // actin cytoskeleton organization // traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation /// 0030742 // GTP-dependent protein binding // inferred from physical interaction","chr3:138066453-138124375 (+) // 89.3 // q22.3"]
["11719276_at",-0.31684017,-0.054728985,-0.09544897,0.05472946,0.08287573,0.11875582,0.2424362,0.04469147,-1.181915,-0.24112633,1.181915,"down","MRPL17",63875,"0006412 // translation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction","chr11:6701574-6704846 (-) // 98.52 // p15.4"]
["11745852_a_at",0.15383434,0.11313629,0.07737541,-0.12658405,-0.13059902,-0.07737541,0.04491479,0.0012630153,1.1698321,0.22630149,1.1698321,"up","NUBP2",10101,"","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0000166 // nucleotide binding // traceable author statement /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation","chr16:1832932-1839182 (+) // 98.16 // p13.3"]
["11749827_a_at",0.12155342,-0.1326294,0.1203084,-0.21296024,-0.039821148,0.039821148,0.69856095,0.39475003,1.0772831,0.10739748,1.0772831,"up","CYBB",1536,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006801 // superoxide metabolic process // inferred from direct assay /// 0006801 // superoxide metabolic process // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0022900 // electron transport chain // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0042554 // superoxide anion generation // inferred from direct assay /// 0042554 // superoxide anion generation // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0045087 // innate immune response // inferred from mutant phenotype /// 0045087 // innate immune response // traceable author statement /// 0045730 // respiratory burst // inferred from mutant phenotype /// 0045730 // respiratory burst // traceable author statement /// 0050665 // hydrogen peroxide biosynthetic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0043020 // NADPH oxidase complex // inferred from direct assay /// 0043020 // NADPH oxidase complex // traceable author statement","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0009055 // electron carrier activity // inferred from direct assay /// 0016175 // superoxide-generating NADPH oxidase activity // inferred from direct assay /// 0016175 // superoxide-generating NADPH oxidase activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0020037 // heme binding // inferred from mutant phenotype /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0050660 // flavin adenine dinucleotide binding // inferred from mutant phenotype","chrX:37639316-37670388 (+) // 90.99 // p11.4"]
["11756300_a_at",-0.06232643,-0.056425095,-0.08647728,0.056425095,0.072380066,0.05827713,0.024140384,0.00023751325,-1.0948782,-0.13077039,1.0948782,"down","ANP32B",10541,"","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","","chr9:100745637-100778205 (+) // 81.4 // q22.33"]
["11745142_a_at",0.2866397,0.101181984,0.11218786,-0.101181984,-0.32380247,-0.14995289,0.1483709,0.016628835,1.2819284,0.3583157,1.2819284,"up","CEP89",84902,"","0000922 // spindle pole // inferred from direct assay /// 0000922 // spindle pole // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","","chr19:33422130-33462869 (-) // 98.36 // q13.11"]
["11729038_a_at",0.077979326,0.1389482,-0.11086917,-0.077979326,0.1782732,-0.07980275,0.9317977,0.8148117,1.019967,0.028522419,1.019967,"up","DCDC2",51473,"0001764 // neuron migration // inferred from sequence or structural similarity /// 0001764 // neuron migration // non-traceable author statement /// 0001764 // neuron migration // inferred from electronic annotation /// 0006968 // cellular defense response // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","","chr6:24169842-24358280 (-) // 90.53 // p22.3"]
["11743607_a_at",0.13618565,0.016037941,0.005054474,-0.005054474,-0.10337353,-0.29419374,0.39849076,0.12006697,1.1381047,0.18663326,1.1381047,"up","COG2",22796,"0006486 // protein glycosylation // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // traceable author statement /// 0006891 // intra-Golgi vesicle-mediated transport // inferred from mutant phenotype /// 0007030 // Golgi organization // inferred from mutant phenotype /// 0007030 // Golgi organization // inferred from electronic annotation /// 0009312 // oligosaccharide biosynthetic process // traceable author statement /// 0015031 // protein transport // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0000139 // Golgi membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005795 // Golgi stack // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0017119 // Golgi transport complex // inferred from direct assay /// 0017119 // Golgi transport complex // inferred from mutant phenotype","0005515 // protein binding // inferred from physical interaction /// 0008565 // protein transporter activity // inferred from mutant phenotype","chr1:230778201-230829731 (+) // 98.44 // q42.2"]
["11716392_s_at",-0.06714916,-0.021551132,-0.0008163452,0.07638359,0.0008163452,0.023216248,0.36499164,0.10055041,-1.044861,-0.06331097,1.044861,"down","ADH5",128,"0001523 // retinoid metabolic process // inferred from electronic annotation /// 0003016 // respiratory system process // inferred from electronic annotation /// 0006068 // ethanol catabolic process // inferred from electronic annotation /// 0006069 // ethanol oxidation // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0018119 // peptidyl-cysteine S-nitrosylation // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0045777 // positive regulation of blood pressure // inferred from electronic annotation /// 0046294 // formaldehyde catabolic process // inferred from electronic annotation /// 0051409 // response to nitrosative stress // inferred from electronic annotation /// 0051775 // response to redox state // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004022 // alcohol dehydrogenase (NAD) activity // inferred from electronic annotation /// 0005504 // fatty acid binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0009055 // electron carrier activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0018467 // formaldehyde dehydrogenase activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051903 // S-(hydroxymethyl)glutathione dehydrogenase activity // traceable author statement /// 0051903 // S-(hydroxymethyl)glutathione dehydrogenase activity // inferred from electronic annotation","chr4:99992379-100009939 (-) // 63.94 // q23"]
["11717405_a_at",0.09609032,-0.005915642,-0.16917992,0.05249214,0.005915642,-0.25034618,0.9144273,0.77267724,1.0264364,0.037644304,1.0264364,"up","FAM120AOS",158293,"","","","chr9:96208554-96215874 (-) // 86.74 // q22.31"]
["11760439_x_at",-0.008970261,0.008970261,-0.25920582,0.48785543,-0.039139748,0.04643917,0.56438917,0.24524848,-1.1904058,-0.25145352,1.1904058,"down","DSTNP2",171220,"","","","chr12:6993768-6995426 (+) // 52.77 // p13.31"]
["11734506_a_at",0.0058903694,-0.09922171,-0.15431213,0.11313152,0.15966511,-0.0058908463,0.29429787,0.06546705,-1.1262417,-0.17151645,1.1262417,"down","MECOM",2122,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0001780 // neutrophil homeostasis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0009605 // response to external stimulus // inferred from electronic annotation /// 0009617 // response to bacterium // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from direct assay /// 0030097 // hemopoiesis // traceable author statement /// 0030099 // myeloid cell differentiation // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0030853 // negative regulation of granulocyte differentiation // inferred from mutant phenotype /// 0030854 // positive regulation of granulocyte differentiation // inferred from mutant phenotype /// 0030900 // forebrain development // inferred from electronic annotation /// 0035115 // embryonic forelimb morphogenesis // inferred from electronic annotation /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043069 // negative regulation of programmed cell death // inferred from mutant phenotype /// 0045766 // positive regulation of angiogenesis // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0046329 // negative regulation of JNK cascade // inferred from mutant phenotype /// 0048935 // peripheral nervous system neuron development // traceable author statement /// 0051726 // regulation of cell cycle // inferred from direct assay /// 0060039 // pericardium development // inferred from electronic annotation /// 0071425 // hemopoietic stem cell proliferation // inferred from electronic annotation /// 0071425 // hemopoietic stem cell proliferation // inferred from sequence or structural similarity /// 0071425 // hemopoietic stem cell proliferation // traceable author statement","0000118 // histone deacetylase complex // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0016607 // nuclear speck // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000975 // regulatory region DNA binding // inferred from direct assay /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0008134 // transcription factor binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from direct assay","chr3:168801286-168864076 (-) // 98.63 // q26.2"]
["11718178_a_at",0.15567827,-0.036031723,-0.15415812,0.42867708,0.036031723,-0.09662056,0.772419,0.50120056,-1.097484,-0.1341999,1.097484,"down","CMTM4",146223,"0006935 // chemotaxis // inferred from electronic annotation","0005615 // extracellular space // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation","chr16:66648652-66730894 (-) // 98.1 // q21"]
["11717182_a_at",-0.06602001,-0.16757965,-0.09357643,0.06602001,0.14852333,0.12184811,0.08108692,0.0047069485,-1.165694,-0.22118913,1.165694,"down","PDS5A",23244,"0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0008156 // negative regulation of DNA replication // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr4:39824411-39979576 (-) // 98.33 // p14"]
["11755265_s_at",-0.026926994,-0.01584816,0.043381214,0.074243546,-0.0424304,0.015847683,0.88865453,0.7158573,-1.0109313,-0.015684893,1.0109313,"down","NT5DC1",221294,"","","0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:116430930-116565386 (+) // 88.25 // q22.1"]
["11725697_at",0.23433399,-0.09213877,-0.093967915,0.15611744,-0.0023469925,0.0023469925,0.91727215,0.7809398,-1.0252413,-0.03596344,1.0252413,"down","TRIM56",81844,"0009615 // response to virus // inferred from electronic annotation /// 0032608 // interferon-beta production // inferred from sequence or structural similarity /// 0032608 // interferon-beta production // inferred from electronic annotation /// 0034340 // response to type I interferon // inferred from sequence or structural similarity /// 0034340 // response to type I interferon // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from sequence or structural similarity /// 0051607 // defense response to virus // inferred from electronic annotation /// 0070534 // protein K63-linked ubiquitination // inferred from sequence or structural similarity /// 0070534 // protein K63-linked ubiquitination // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from sequence or structural similarity /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:100728719-100733905 (+) // 89.88 // q22.1"]
["11728149_a_at",-0.015124798,0.014206409,0.035531998,0.010483265,-0.010483265,-0.08543587,0.60694176,0.28703633,1.0281255,0.040016413,1.0281255,"up","NPM2",10361,"0006338 // chromatin remodeling // inferred from direct assay /// 0007096 // regulation of exit from mitosis // inferred from mutant phenotype /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007338 // single fertilization // inferred from mutant phenotype /// 0007338 // single fertilization // inferred from electronic annotation /// 0009790 // embryo development // inferred from mutant phenotype /// 0009994 // oocyte differentiation // inferred from expression pattern /// 0016568 // chromatin modification // inferred from electronic annotation /// 0045836 // positive regulation of meiosis // inferred from mutant phenotype","0000789 // cytoplasmic chromatin // inferred from direct assay /// 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0042393 // histone binding // traceable author statement","chr8:21882354-21894407 (+) // 91.18 // p21.3"]
["11755829_a_at",-0.37867737,0.1560452,-0.03832054,-0.47329116,0.03832054,0.40339518,0.9297995,0.8104337,-1.0544269,-0.076459095,1.0544269,"down","ATP13A4",84239,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:193119866-193185137 (-) // 98.33 // q29"]
["11744492_x_at",0.023993492,-0.14018726,-0.0667181,0.22617817,0.083275795,-0.023993492,0.43932062,0.1458764,-1.1142895,-0.15612413,1.1142895,"down","SRSF5",6430,"0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006376 // mRNA splice site selection // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0009611 // response to wounding // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0051726 // regulation of cell cycle // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016607 // nuclear speck // inferred from sequence or structural similarity","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0050733 // RS domain binding // inferred from electronic annotation","chr14:70233898-70238721 (+) // 96.54 // q24.2"]
["11762834_at",-0.07644653,0.18468523,0.003061533,-0.21635175,-0.003061533,0.04946637,0.73855454,0.45023492,1.0671397,0.09374911,1.0671397,"up","NKAIN2",154215,"","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:124125181-124980104 (+) // 99.83 // q22.31"]
["11737263_at",0.07747221,-0.1967907,-0.1887989,-0.012226105,0.012226105,0.16059732,0.52551645,0.21117474,-1.1143776,-0.15623818,1.1143776,"down","HRK",8739,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0008634 // negative regulation of survival gene product expression // traceable author statement /// 0032464 // positive regulation of protein homooligomerization // inferred from direct assay /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0051365 // cellular response to potassium ion starvation // inferred from electronic annotation /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from direct assay","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr12:117298224-117319232 (-) // 86.26 // q24.22"]
["11722320_a_at",0.03154087,0.09492302,-0.122117996,-0.1818204,-0.03154087,0.24352074,0.9843831,0.9540116,-1.005982,-0.008604551,1.005982,"down","EFNB3",1949,"0007267 // cell-cell signaling // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // inferred from electronic annotation /// 0007628 // adult walking behavior // inferred from electronic annotation /// 0016198 // axon choice point recognition // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0048013 // ephrin receptor signaling pathway // inferred from direct assay","0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005005 // transmembrane-ephrin receptor activity // traceable author statement /// 0046875 // ephrin receptor binding // inferred from direct assay","chr17:7608389-7614696 (+) // 98.93 // p13.1"]
["11749968_a_at",-0.042250156,0.16301394,-0.052400112,-0.14843321,0.042250633,0.08631325,0.9187154,0.78448385,1.0205953,0.02941092,1.0205953,"up","RAD52",5893,"0000724 // double-strand break repair via homologous recombination // traceable author statement /// 0000724 // double-strand break repair via homologous recombination // inferred from electronic annotation /// 0000730 // DNA recombinase assembly // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006302 // double-strand break repair // traceable author statement /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006312 // mitotic recombination // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007131 // reciprocal meiotic recombination // traceable author statement","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003677 // DNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr12:1025371-1058860 (-) // 88.39 // p13.33"]
["11739554_a_at",0.0026512146,-0.0026512146,-0.038018703,0.18743134,0.31971598,-0.05387163,0.52551645,0.21114169,-1.1202066,-0.16376482,1.1202066,"down","GAS7",8522,"0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0007050 // cell cycle arrest // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0030041 // actin filament polymerization // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0051017 // actin filament bundle assembly // inferred from electronic annotation","0001726 // ruffle // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005884 // actin filament // inferred from electronic annotation","0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0051015 // actin filament binding // inferred from electronic annotation","chr17:9813925-9940128 (-) // 90.07 // p13.1"]
["11757005_a_at",-0.10234928,-0.014493942,0.004296303,0.28573227,0.014494419,-0.004296303,0.56146973,0.24220552,-1.0989754,-0.13615912,1.0989754,"down","FUCA1",2517,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006004 // fucose metabolic process // inferred from electronic annotation /// 0006027 // glycosaminoglycan catabolic process // non-traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred by curator /// 0005737 // cytoplasm // traceable author statement /// 0005764 // lysosome // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004560 // alpha-L-fucosidase activity // traceable author statement /// 0004560 // alpha-L-fucosidase activity // inferred from electronic annotation /// 0015928 // fucosidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0043169 // cation binding // inferred from electronic annotation","chr1:24175298-24194780 (-) // 100.0 // p36.11"]
["11749962_a_at",-0.15307474,0.21816206,-0.069998264,-0.30592012,0.069998264,0.22298098,0.99603546,0.98961234,1.001857,0.0026766611,1.001857,"up","BCAS1",8537,"","0005737 // cytoplasm // inferred from electronic annotation","","chr20:52644410-52645983 (-) // 94.96 // q13.2"]
["11756481_x_at",-0.07909775,-0.36415768,-0.1626153,0.079098225,0.15665913,0.21976948,0.16085851,0.019627376,-1.2779214,-0.35379913,1.2779214,"down","FDXR",2232,"0006091 // generation of precursor metabolites and energy // traceable author statement /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0055114 // oxidation-reduction process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070995 // NADPH oxidation // inferred from electronic annotation","0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004324 // ferredoxin-NADP+ reductase activity // inferred from electronic annotation /// 0004324 // ferredoxin-NADP+ reductase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0015039 // NADPH-adrenodoxin reductase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0070402 // NADPH binding // inferred from electronic annotation","chr17:72858622-72869138 (-) // 97.25 // q25.1"]
["11735765_a_at",0.011487007,-0.019080639,-0.034017563,0.32177687,-0.01148653,0.13989162,0.46888572,0.16719271,-1.1203357,-0.16393109,1.1203357,"down","RAB30",27314,"0006184 // GTP catabolic process // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005795 // Golgi stack // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation","chr11:82692477-82782908 (-) // 97.59 // q14.1"]
["11724225_a_at",-0.033738136,-0.05436325,0.009807587,0.08265114,0.1757145,-0.009807587,0.41081426,0.12753165,-1.0784435,-0.10895063,1.0784435,"down","GGCT",79017,"0001836 // release of cytochrome c from mitochondria // inferred from mutant phenotype /// 0006750 // glutathione biosynthetic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement","0003839 // gamma-glutamylcyclotransferase activity // inferred from direct assay /// 0003839 // gamma-glutamylcyclotransferase activity // traceable author statement /// 0003839 // gamma-glutamylcyclotransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay","chr7:30536238-30544474 (-) // 96.34 // p14.3"]
["11759893_at",0.035476685,0.23178673,0.49571037,-0.035476685,-0.25212002,-0.05485058,0.3038422,0.07023633,1.2909863,0.36847368,1.2909863,"up","PLEKHA8 /// PLEKHA8P1","51054 /// 84725","0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0046836 // glycolipid transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation /// 0017089 // glycolipid transporter activity // inferred from electronic annotation /// 0051861 // glycolipid binding // inferred from electronic annotation","chr7:30068028-30124336 (+) // 93.16 // p14.3"]
["11731636_a_at",-0.36119843,-0.046430588,0.11326265,0.04502535,0.03951454,-0.03951454,0.7515554,0.47033432,-1.0815727,-0.11313058,1.0815727,"down","GAB1",2549,"0000187 // activation of MAPK activity // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008544 // epidermis development // inferred from electronic annotation /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0060711 // labyrinthine layer development // inferred from electronic annotation /// 0070102 // interleukin-6-mediated signaling pathway // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation","chr4:144257557-144395718 (+) // 96.62 // q31.21"]
["11730834_a_at",0.10127592,0.12737322,-0.04182577,0.025514603,-0.025514603,-0.28919935,0.542197,0.22537675,1.1162609,0.15867424,1.1162609,"up","KATNA1",11104,"0001764 // neuron migration // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0008104 // protein localization // inferred from electronic annotation /// 0010977 // negative regulation of neuron projection development // inferred from electronic annotation /// 0031122 // cytoplasmic microtubule organization // inferred from electronic annotation /// 0051013 // microtubule severing // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051329 // interphase of mitotic cell cycle // inferred from mutant phenotype","0000922 // spindle pole // inferred from direct assay /// 0000922 // spindle pole // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005811 // lipid particle // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008017 // microtubule binding // inferred from direct assay /// 0008568 // microtubule-severing ATPase activity // inferred from direct assay /// 0008568 // microtubule-severing ATPase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0045502 // dynein binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from physical interaction","chr6:149916008-149969940 (-) // 95.9 // q25.1"]
["11717854_a_at",-0.27502227,0.15611267,0.063191414,0.025155067,-0.13091469,-0.025155067,0.95169556,0.8655095,1.0175259,0.025065534,1.0175259,"up","ZSCAN18",65982,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:58595222-58609730 (-) // 90.75 // q13.43"]
["11730938_x_at",0.037329674,0.03684616,-0.019766808,-0.05824566,-0.06297684,0.019766808,0.49742183,0.18886824,1.0366687,0.05195485,1.0366687,"up","PYCR1",5831,"0006561 // proline biosynthetic process // inferred from direct assay /// 0006561 // proline biosynthetic process // inferred from electronic annotation /// 0006561 // proline biosynthetic process // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // traceable author statement /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0034599 // cellular response to oxidative stress // inferred from mutant phenotype /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0055129 // L-proline biosynthetic process // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004735 // pyrroline-5-carboxylate reductase activity // inferred from direct assay /// 0004735 // pyrroline-5-carboxylate reductase activity // traceable author statement /// 0004735 // pyrroline-5-carboxylate reductase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction","chr17:79890266-79895145 (-) // 92.82 // q25.3"]
["11738411_a_at",0.12205815,0.01810956,-0.07352424,-0.19672489,0.012015343,-0.012015104,0.679108,0.3692027,1.0627406,0.087789446,1.0627406,"up","C1QTNF7",114905,"0051260 // protein homooligomerization // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","","chr4:15341559-15447789 (+) // 92.99 // p15.32"]
["11741146_x_at",-0.03216839,0.12787914,0.03401184,-0.10889912,0.00079250336,-0.00079250336,0.5677876,0.24848394,1.0566815,0.07954061,1.0566815,"up","ALDH3B1",221,"0006066 // alcohol metabolic process // traceable author statement /// 0006068 // ethanol catabolic process // inferred from electronic annotation /// 0006081 // cellular aldehyde metabolic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0034599 // cellular response to oxidative stress // inferred from direct assay /// 0046185 // aldehyde catabolic process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay","0004028 // 3-chloroallyl aldehyde dehydrogenase activity // traceable author statement /// 0004030 // aldehyde dehydrogenase [NAD(P)+] activity // inferred from direct assay /// 0004030 // aldehyde dehydrogenase [NAD(P)+] activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016620 // oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor // inferred from electronic annotation","chr11:67782764-67796741 (+) // 73.51 // q13.2"]
["11758292_s_at",-0.0911746,-0.0066514015,0.0066514015,-0.08499718,0.17978096,0.41004562,0.56532675,0.24593791,-1.1476383,-0.19866805,1.1476383,"down","PTGIR",5739,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007187 // G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0005085 // guanyl-nucleotide exchange factor activity // traceable author statement","chr19:47124423-47126858 (-) // 89.5 // q13.32"]
["11726550_a_at",-0.16957855,0.1584661,0.116402626,-0.031597853,-0.074441195,0.031597853,0.8338942,0.60722095,1.0424011,0.059910476,1.0424011,"up","CCNB3",85417,"0000079 // regulation of cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007126 // meiosis // inferred from electronic annotation /// 0010389 // regulation of G2/M transition of mitotic cell cycle // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation","chrX:49969415-50094913 (+) // 97.6 // p11.22"]
["11720186_s_at",-0.19162941,-0.12952995,-0.05599022,0.2914343,0.25108814,0.05599022,0.14970239,0.016993243,-1.2528561,-0.32522076,1.2528561,"down","MAD2L1",4085,"0000070 // mitotic sister chromatid segregation // inferred from electronic annotation /// 0000075 // cell cycle checkpoint // traceable author statement /// 0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007093 // mitotic cell cycle checkpoint // inferred from direct assay /// 0007094 // mitotic cell cycle spindle assembly checkpoint // traceable author statement /// 0007094 // mitotic cell cycle spindle assembly checkpoint // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0042177 // negative regulation of protein catabolic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0060564 // negative regulation of mitotic anaphase-promoting complex activity // inferred from direct assay /// 0090267 // positive regulation of mitotic cell cycle spindle assembly checkpoint // inferred from mutant phenotype /// 0090267 // positive regulation of mitotic cell cycle spindle assembly checkpoint // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0000922 // spindle pole // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction","chr4:120980490-120988229 (-) // 99.37 // q27"]
["11724178_a_at",-0.1547637,-0.030091763,0.030091763,-0.43908215,0.073447704,0.24390316,0.98678076,0.96112984,-1.0076613,-0.011010855,1.0076613,"down","DAAM2",23500,"0016043 // cellular component organization // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation","","0003779 // actin binding // inferred from electronic annotation /// 0017048 // Rho GTPase binding // inferred from electronic annotation","chr6:39760793-39872645 (+) // 97.67 // p21.2"]
["11735151_a_at",-0.24796438,-0.19272327,0.12650394,0.008686066,-0.008686066,0.23088837,0.5836528,0.26382697,-1.1342123,-0.18169065,1.1342123,"down","NXPE3",91775,"","0005576 // extracellular region // inferred from electronic annotation","","chr3:101498285-101547507 (+) // 80.86 // q12.3"]
["11732055_s_at",-0.09616065,-0.030643702,0.030643463,-0.049646378,0.0375185,0.23800611,0.62965614,0.31127793,-1.077245,-0.10734639,1.077245,"down","CC2D2B /// LOC100652732 /// LOC100653119","100652732 /// 100653119 /// 387707","","","","chr10:97759847-97792440 (+) // 86.7 // q24.1"]
["11745619_a_at",0.034624577,-0.034624577,0.082224846,-0.11350107,0.04616332,-0.04745865,0.63451886,0.31648213,1.0465736,0.06567383,1.0465736,"up","ST18",9705,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:53025103-53130382 (-) // 99.46 // q11.23"]
["11735608_s_at",-0.02118349,-0.06273699,0.12212992,-0.16037798,0.02118349,0.37436962,0.8878086,0.7137568,-1.0465602,-0.065655254,1.0465602,"down","C12orf56",115749,"","","","chr12:64660762-64784345 (-) // 94.18 // q14.2"]
["11729166_a_at",0.22436333,0.0053286552,-0.04739952,0.089528084,-0.005329132,-0.0079984665,0.88692343,0.7119218,1.0248153,0.03536395,1.0248153,"up","DCTD",1635,"0006206 // pyrimidine base metabolic process // traceable author statement /// 0006220 // pyrimidine nucleotide metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009165 // nucleotide biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046134 // pyrimidine nucleoside biosynthetic process // traceable author statement /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement","0005829 // cytosol // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004132 // dCMP deaminase activity // not recorded /// 0004132 // dCMP deaminase activity // inferred from electronic annotation /// 0004132 // dCMP deaminase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016810 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:183811246-183838747 (-) // 96.16 // q35.1"]
["11763092_at",0,0,-0.01692915,-0.030180454,0.116316795,0.2789178,0.54489654,0.22768831,-1.0922687,-0.12732781,1.0922687,"down","GYPB",2994,"0007165 // signal transduction // non-traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004872 // receptor activity // non-traceable author statement","chr4:144918691-144940477 (-) // 77.17 // q31.21"]
["11730023_s_at",0.27169514,-0.07021332,-0.12407017,0.24862957,0.07021332,-0.07682514,0.9016288,0.74216515,-1.0387646,-0.054868747,1.0387646,"down","PILRB",29990,"0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0007171 // activation of transmembrane receptor protein tyrosine kinase activity // non-traceable author statement","0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr7:99955601-99965447 (+) // 69.58 // q22.1"]
["11752358_a_at",0.10277581,0.011142969,-0.011142969,0.08176851,-0.012201071,-0.04281783,0.8553029,0.6464943,1.0177209,0.025342023,1.0177209,"up","MYH13",8735,"0006936 // muscle contraction // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005859 // muscle myosin complex // traceable author statement /// 0016459 // myosin complex // inferred from electronic annotation /// 0030016 // myofibril // inferred from electronic annotation /// 0032982 // myosin filament // inferred from electronic annotation","0000146 // microfilament motor activity // traceable author statement /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // non-traceable author statement /// 0003779 // actin binding // inferred from electronic annotation /// 0005516 // calmodulin binding // non-traceable author statement /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation","chr17:10223342-10254132 (-) // 99.91 // p13.1"]
["11756840_a_at",0.124744415,0.121707916,-0.037600517,0.022010326,-0.0568738,-0.022010326,0.515783,0.20313312,1.0633196,0.08857524,1.0633196,"up","ZFP1",162239,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:75182431-75204415 (+) // 99.8 // q23.1"]
["11725009_a_at",0.034789324,-0.025123835,-0.12094045,-0.010296583,0.010296345,0.23851109,0.59232527,0.27255717,-1.0841732,-0.11659525,1.0841732,"down","EPB42",2038,"0000902 // cell morphogenesis // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0018149 // peptide cross-linking // inferred from electronic annotation /// 0020027 // hemoglobin metabolic process // inferred from electronic annotation /// 0043249 // erythrocyte maturation // inferred from electronic annotation /// 0048536 // spleen development // inferred from electronic annotation /// 0050801 // ion homeostasis // inferred from electronic annotation /// 0055072 // iron ion homeostasis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030863 // cortical cytoskeleton // inferred from electronic annotation","0003810 // protein-glutamine gamma-glutamyltransferase activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // traceable author statement","chr15:43487570-43513481 (-) // 85.09 // q15.2"]
["11750730_x_at",-0.016889572,0.0018181801,-0.0018181801,-0.1111393,0.16879272,0.13760567,0.7514672,0.47021455,-1.0502379,-0.07071616,1.0502379,"down","SNCAIP",9627,"0008219 // cell death // inferred from electronic annotation /// 0042417 // dopamine metabolic process // inferred from direct assay /// 0046928 // regulation of neurotransmitter secretion // inferred from direct assay /// 0090083 // regulation of inclusion body assembly // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0042734 // presynaptic membrane // non-traceable author statement /// 0043025 // neuronal cell body // non-traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr5:121647385-121799649 (+) // 99.83 // q23.2"]
["11747229_a_at",0.17466593,0.007887363,-0.020843983,0.12327671,-0.18635654,-0.007887363,0.78068763,0.5141168,1.055231,0.077558815,1.055231,"up","ANKS1A",23294,"0006929 // substrate-dependent cell migration // inferred from sequence or structural similarity /// 0016322 // neuron remodeling // inferred from sequence or structural similarity /// 0048013 // ephrin receptor signaling pathway // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from sequence or structural similarity","","chr6:34857058-35085319 (+) // 94.3 // p21.31"]
["11739206_a_at",0.20269585,-0.02083683,-0.03190136,0.2469883,-0.0063581467,0.0063581467,0.92023623,0.7878131,-1.022672,-0.032343585,1.022672,"down","TTL",150465,"0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0006464 // cellular protein modification process // inferred from electronic annotation /// 0030516 // regulation of axon extension // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0004835 // tubulin-tyrosine ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation","chr2:113239730-113290300 (+) // 84.02 // q13"]
["11718705_at",-0.37177372,-0.1358881,-0.045401573,0.30896187,0.39518452,0.045401573,0.22530818,0.038774148,-1.3511649,-0.4342038,1.3511649,"down","IGF1R",3480,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0006955 // immune response // inferred from mutant phenotype /// 0007165 // signal transduction // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0014065 // phosphatidylinositol 3-kinase cascade // inferred by curator /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030010 // establishment of cell polarity // inferred from electronic annotation /// 0030238 // male sex determination // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0030879 // mammary gland development // inferred from electronic annotation /// 0031017 // exocrine pancreas development // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0032467 // positive regulation of cytokinesis // inferred from electronic annotation /// 0033197 // response to vitamin E // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043409 // negative regulation of MAPK cascade // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from mutant phenotype /// 0045768 // positive regulation of anti-apoptosis // inferred from electronic annotation /// 0046328 // regulation of JNK cascade // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048009 // insulin-like growth factor receptor signaling pathway // inferred from direct assay /// 0048009 // insulin-like growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // inferred from direct assay /// 0051054 // positive regulation of DNA metabolic process // inferred from electronic annotation /// 0051262 // protein tetramerization // inferred from direct assay /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0051389 // inactivation of MAPKK activity // inferred from direct assay /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0051898 // negative regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0060740 // prostate gland epithelium morphogenesis // inferred from electronic annotation /// 0090031 // positive regulation of steroid hormone biosynthetic process // inferred from electronic annotation","0005792 // microsome // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred by curator /// 0005901 // caveola // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005010 // insulin-like growth factor-activated receptor activity // inferred from direct assay /// 0005010 // insulin-like growth factor-activated receptor activity // traceable author statement /// 0005158 // insulin receptor binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005520 // insulin-like growth factor binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0031994 // insulin-like growth factor I binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from physical interaction /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation /// 0043559 // insulin binding // inferred from physical interaction /// 0043560 // insulin receptor substrate binding // inferred from physical interaction /// 0043560 // insulin receptor substrate binding // inferred from electronic annotation","chr15:99192272-99507759 (+) // 97.28 // q26.3"]
["11762994_at",-0.19934392,-0.11631918,0.11631918,-0.1577785,0.18303156,0.12700796,0.74113214,0.45444703,-1.0846289,-0.11720157,1.0846289,"down","YME1L1",10730,"0006508 // proteolysis // inferred from electronic annotation /// 0006515 // misfolded or incompletely synthesized protein catabolic process // inferred from mutant phenotype /// 0006955 // immune response // non-traceable author statement /// 0006968 // cellular defense response // non-traceable author statement /// 0007005 // mitochondrion organization // inferred from mutant phenotype /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0030163 // protein catabolic process // inferred from electronic annotation /// 0031295 // T cell costimulation // traceable author statement /// 0045768 // positive regulation of anti-apoptosis // inferred from mutant phenotype /// 0050776 // regulation of immune response // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement","0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // non-traceable author statement /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042287 // MHC protein binding // non-traceable author statement /// 0042605 // peptide antigen binding // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:22217461-23019608 (+) // 99.16 // q11.2"]
["11759051_x_at",-0.086462975,0.23587894,-0.11229324,-0.2302494,0.11770916,0.086462975,0.96455956,0.9002365,1.0147095,0.02106672,1.0147095,"up","SPANXD /// SPANXE","171489 /// 64648","","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","","chrX:140785567-140786896 (-) // 88.89 // q27.2"]
["11733343_a_at",0.02947712,0.07025528,0.05667305,-0.05192375,-0.02947712,-0.0426054,0.060012247,0.002375219,1.0669338,0.093470596,1.0669338,"up","UTP6",55813,"0006364 // rRNA processing // inferred from electronic annotation /// 0006396 // RNA processing // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation","","chr17:30190067-30228765 (-) // 94.1 // q11.2"]
["11715870_a_at",0.13456726,0.008142471,0.024539948,-0.008142471,-0.01965046,-0.16295815,0.42131713,0.13422142,1.086233,0.119333625,1.086233,"up","UFD1L",7353,"0001501 // skeletal system development // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0004843 // ubiquitin-specific protease activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr22:19437415-19466729 (-) // 95.53 // q11.21"]
["11754930_x_at",0.074751854,0.049013138,-0.033136368,0.033136368,-0.19441605,-0.061101913,0.546554,0.22923379,1.075,0.10433672,1.075,"up","ATP1A1",476,"0002026 // regulation of the force of heart contraction // inferred from electronic annotation /// 0002028 // regulation of sodium ion transport // inferred from sequence or structural similarity /// 0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0015672 // monovalent inorganic cation transport // inferred from electronic annotation /// 0031947 // negative regulation of glucocorticoid biosynthetic process // inferred from electronic annotation /// 0034220 // ion transmembrane transport // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0045822 // negative regulation of heart contraction // inferred from electronic annotation /// 0045823 // positive regulation of heart contraction // inferred from electronic annotation /// 0045989 // positive regulation of striated muscle contraction // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005624 // membrane fraction // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005792 // microsome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005890 // sodium:potassium-exchanging ATPase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from sequence or structural similarity /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003869 // 4-nitrophenylphosphatase activity // inferred from electronic annotation /// 0005391 // sodium:potassium-exchanging ATPase activity // inferred from electronic annotation /// 0005391 // sodium:potassium-exchanging ATPase activity // inferred from sequence or structural similarity /// 0005391 // sodium:potassium-exchanging ATPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0015077 // monovalent inorganic cation transmembrane transporter activity // inferred from electronic annotation /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from sequence or structural similarity","chr1:116915003-116947394 (+) // 94.83 // p13.1"]
["11728984_a_at",-0.019324303,-0.06455517,-0.12973022,0.2688799,0.11896896,0.019324303,0.27988827,0.05943455,-1.1542275,-0.2069276,1.1542275,"down","MTHFD1L",25902,"0006730 // one-carbon metabolic process // inferred from electronic annotation /// 0006760 // folic acid-containing compound metabolic process // inferred from direct assay /// 0009396 // folic acid-containing compound biosynthetic process // inferred from electronic annotation /// 0015942 // formate metabolic process // inferred from direct assay /// 0035999 // tetrahydrofolate interconversion // inferred from electronic annotation /// 0046653 // tetrahydrofolate metabolic process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004329 // formate-tetrahydrofolate ligase activity // inferred from direct assay /// 0004329 // formate-tetrahydrofolate ligase activity // inferred from electronic annotation /// 0004488 // methylenetetrahydrofolate dehydrogenase (NADP+) activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay","chr6:151186690-151423021 (+) // 96.85 // q25.1"]
["11724248_s_at",-0.018035412,-0.1682725,-0.01907444,0.25128078,0.018034935,0.04100418,0.40995485,0.12697244,-1.1265417,-0.17190076,1.1265417,"down","TMEM127",55654,"0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0032007 // negative regulation of TOR signaling cascade // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:96915945-96931751 (-) // 87.52 // q11.2"]
["11732533_a_at",0.106377125,-0.022089005,-0.43405485,0.022089481,0.04199505,-0.20598602,0.89182067,0.7218882,-1.0491991,-0.06928848,1.0491991,"down","LMNB1",4001,"0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005638 // lamin filament // inferred from electronic annotation /// 0005638 // lamin filament // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005882 // intermediate filament // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0005198 // structural molecule activity // traceable author statement /// 0043274 // phospholipase binding // inferred from electronic annotation","chr5:126112832-126172808 (+) // 98.63 // q23.2"]
["11718035_at",0.13420868,-0.036170006,-0.020140648,0.1568079,0.020140648,-0.05745983,0.95606023,0.87530947,-1.0096558,-0.013863597,1.0096558,"down","PPIL1",51645,"0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006457 // protein folding // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005681 // spliceosomal complex // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation","chr6:36822604-36842822 (-) // 97.55 // p21.2"]
["11749032_x_at",0.17906284,0.31888723,0.14431858,-0.2086544,-0.2788787,-0.1443181,0.06669317,0.002999926,1.3422996,0.4247067,1.3422996,"up","PTBP3",9991,"0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0033119 // negative regulation of RNA splicing // inferred from direct assay /// 0043249 // erythrocyte maturation // inferred from electronic annotation /// 0045595 // regulation of cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement","chr9:114985827-115095306 (-) // 97.96 // q32"]
["11743761_a_at",-0.088009834,0.022405624,-0.022405148,0.18570662,0.1427517,-0.1309843,0.7111695,0.4129232,-1.0681847,-0.09516117,1.0681847,"down","SNIP1",79753,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007249 // I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0031047 // gene silencing by RNA // inferred from electronic annotation /// 0035196 // production of miRNAs involved in gene silencing by miRNA // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr1:38001679-38019945 (-) // 90.29 // p34.3"]
["11727165_a_at",0.2735548,-0.14842892,0.031653404,0.21872711,-0.031653404,-0.17709255,0.91937995,0.78563267,1.0344993,0.04893265,1.0344993,"up","KIAA1731",85459,"","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation","","chr11:93394812-93463522 (+) // 98.58 // q21"]
["11740731_x_at",0.28540802,0.04572487,-0.031276703,0.008254051,-0.008254051,-0.010293007,0.65595156,0.34006697,1.0742897,0.103383064,1.0742897,"up","C10orf125",282969,"0005996 // monosaccharide metabolic process // inferred from electronic annotation /// 0006004 // fucose metabolic process // inferred from sequence or structural similarity /// 0006004 // fucose metabolic process // inferred from electronic annotation","","0016853 // isomerase activity // inferred from electronic annotation /// 0016857 // racemase and epimerase activity, acting on carbohydrates and derivatives // inferred from sequence or structural similarity /// 0016857 // racemase and epimerase activity, acting on carbohydrates and derivatives // inferred from electronic annotation /// 0042806 // fucose binding // inferred from sequence or structural similarity /// 0042806 // fucose binding // inferred from electronic annotation /// 0048029 // monosaccharide binding // inferred from electronic annotation","chr10:135168577-135171529 (-) // 98.24 // q26.3"]
["11726346_a_at",0.018986225,-0.0128388405,0.009347916,-0.009347916,-0.043772697,0.057359695,0.96769106,0.90992016,1.0026041,0.0037520777,1.0026041,"up","LAT2",7462,"0019722 // calcium-mediated signaling // inferred from genetic interaction /// 0035556 // intracellular signal transduction // inferred from genetic interaction /// 0042113 // B cell activation // inferred from direct assay /// 0042113 // B cell activation // traceable author statement /// 0043303 // mast cell degranulation // inferred from electronic annotation /// 0050853 // B cell receptor signaling pathway // inferred from direct assay","0005622 // intracellular // inferred from genetic interaction /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0042169 // SH2 domain binding // inferred from mutant phenotype","chr7:73624086-73644161 (+) // 92.78 // q11.23"]
["11741209_a_at",0.027590752,0.08104801,0.16702843,-0.027590752,-0.20905161,-0.17515802,0.19614512,0.02926774,1.172149,0.2291559,1.172149,"up","ZNF280D",54816,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:56991557-57025787 (-) // 64.54 // q21.3"]
["11727984_at",-0.18033743,-0.027992964,0.04421687,-0.08697653,0.08267951,0.027992725,0.7663971,0.49240127,-1.0443484,-0.06260303,1.0443484,"down","ODZ3",55714,"0007165 // signal transduction // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr4:183245096-183724177 (+) // 97.98 // q35.1"]
["11744122_s_at",0.0805521,-0.0805521,-0.084950924,0.23206806,0.12575912,-0.23231697,0.86461323,0.6656824,-1.0498285,-0.070153706,1.0498285,"down","FAM156A /// FAM156B","29057 /// 727866","","0005635 // nuclear envelope // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chrX:52925993-52937587 (+) // 85.86 // p11.22 /// chrX:52976461-52988043 (-) // 85.84 // p11.22"]
["11758089_s_at",0.11211109,0.21947193,0.2215643,-0.21736813,-0.11211109,-0.12047672,0.06128055,0.0024986137,1.2608248,0.3343678,1.2608248,"up","HMMR",3161,"","0005737 // cytoplasm // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005540 // hyaluronic acid binding // inferred from electronic annotation","chr5:162918527-162918947 (+) // 70.28 // q34"]
["11754728_a_at",0.00091791153,-0.0941968,-0.00091791153,0.14029121,0.017979145,-0.03936529,0.63133043,0.31298754,-1.0504693,-0.07103397,1.0504693,"down","MAL",4118,"0001766 // membrane raft polarization // traceable author statement /// 0006917 // induction of apoptosis // non-traceable author statement /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0007417 // central nervous system development // traceable author statement /// 0030154 // cell differentiation // traceable author statement /// 0042552 // myelination // non-traceable author statement /// 0042552 // myelination // traceable author statement /// 0042552 // myelination // inferred from electronic annotation /// 0045176 // apical protein localization // traceable author statement","0000300 // peripheral to membrane of membrane fraction // inferred from electronic annotation /// 0005768 // endosome // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // traceable author statement /// 0045121 // membrane raft // inferred from direct assay /// 0045121 // membrane raft // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // traceable author statement /// 0015267 // channel activity // traceable author statement /// 0016505 // apoptotic protease activator activity // non-traceable author statement /// 0019911 // structural constituent of myelin sheath // inferred from direct assay /// 0019911 // structural constituent of myelin sheath // inferred from electronic annotation","chr2:95717397-95719736 (+) // 92.19 // q11.1"]
["11742017_a_at",-0.112407446,0.14109111,0.12952185,-0.19473696,-0.07703304,0.077032804,0.67204607,0.36079192,1.0849643,0.117647536,1.0849643,"up","IRAK3",11213,"0001960 // negative regulation of cytokine-mediated signaling pathway // inferred by curator /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0009615 // response to virus // inferred by curator /// 0010933 // positive regulation of macrophage tolerance induction // inferred from sequence or structural similarity /// 0010933 // positive regulation of macrophage tolerance induction // inferred from electronic annotation /// 0010936 // negative regulation of macrophage cytokine production // inferred from sequence or structural similarity /// 0010936 // negative regulation of macrophage cytokine production // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from sequence or structural similarity /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0032494 // response to peptidoglycan // inferred from sequence or structural similarity /// 0032494 // response to peptidoglycan // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from sequence or structural similarity /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032695 // negative regulation of interleukin-12 production // inferred from mutant phenotype /// 0032695 // negative regulation of interleukin-12 production // inferred from sequence or structural similarity /// 0032695 // negative regulation of interleukin-12 production // inferred from electronic annotation /// 0032715 // negative regulation of interleukin-6 production // inferred from mutant phenotype /// 0032715 // negative regulation of interleukin-6 production // inferred from sequence or structural similarity /// 0032715 // negative regulation of interleukin-6 production // inferred from electronic annotation /// 0032720 // negative regulation of tumor necrosis factor production // inferred from mutant phenotype /// 0032720 // negative regulation of tumor necrosis factor production // inferred from electronic annotation /// 0034122 // negative regulation of toll-like receptor signaling pathway // inferred from sequence or structural similarity /// 0034122 // negative regulation of toll-like receptor signaling pathway // inferred from electronic annotation /// 0042177 // negative regulation of protein catabolic process // inferred from mutant phenotype /// 0042177 // negative regulation of protein catabolic process // inferred from electronic annotation /// 0043242 // negative regulation of protein complex disassembly // inferred from mutant phenotype /// 0043244 // regulation of protein complex disassembly // inferred from sequence or structural similarity /// 0043244 // regulation of protein complex disassembly // inferred from electronic annotation /// 0043330 // response to exogenous dsRNA // inferred from sequence or structural similarity /// 0043330 // response to exogenous dsRNA // inferred from electronic annotation /// 0043407 // negative regulation of MAP kinase activity // inferred from mutant phenotype /// 0043407 // negative regulation of MAP kinase activity // inferred from electronic annotation /// 0045824 // negative regulation of innate immune response // inferred from sequence or structural similarity /// 0045824 // negative regulation of innate immune response // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from electronic annotation /// 0070498 // interleukin-1-mediated signaling pathway // inferred from mutant phenotype /// 0070498 // interleukin-1-mediated signaling pathway // inferred from electronic annotation /// 0070555 // response to interleukin-1 // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from physical interaction","chr12:66582977-66648392 (+) // 68.88 // q14.3"]
["11738131_a_at",0.023559093,-0.09609938,-0.03270912,-0.023558617,0.03667879,0.08441925,0.53637815,0.22042596,-1.0479692,-0.067596346,1.0479692,"down","RNF212",285498,"","","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:1065873-1107582 (-) // 51.43 // p16.3"]
["11750308_s_at",-0.031793594,0.023765564,-0.023765564,-0.035266876,0.12306404,0.15153122,0.5243848,0.21037,-1.0646461,-0.09037398,1.0646461,"down","C20orf3",57136,"0009058 // biosynthetic process // inferred from electronic annotation","0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004064 // arylesterase activity // inferred from direct assay /// 0016844 // strictosidine synthase activity // inferred from electronic annotation","chr20:24944120-24973566 (-) // 99.88 // p11.21"]
["11718670_at",0.45438766,0.048054695,-0.018859863,0.018859386,-0.078872204,-0.14015818,0.5300678,0.21526174,1.1711434,0.22791775,1.1711434,"up","MED9",55090,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0016592 // mediator complex // inferred from electronic annotation","0001104 // RNA polymerase II transcription cofactor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr17:17380299-17396650 (+) // 94.92 // p11.2"]
["11744710_a_at",-0.08188009,-0.21101236,-0.20080566,0.37251997,0.08188009,0.30458975,0.1293604,0.0126291895,-1.335669,-0.41756257,1.335669,"down","TTLL4",9654,"0006464 // cellular protein modification process // inferred from electronic annotation /// 0018095 // protein polyglutamylation // inferred from sequence or structural similarity /// 0018095 // protein polyglutamylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0004835 // tubulin-tyrosine ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0015631 // tubulin binding // inferred from sequence or structural similarity /// 0015631 // tubulin binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation","chr2:219575642-219619410 (+) // 97.25 // q35"]
["11751598_a_at",0.0665102,0.020508766,-0.085458755,0.15014935,-0.020508766,-0.03229618,0.8761769,0.688986,-1.0223775,-0.031927977,1.0223775,"down","DPP7",29952,"0006508 // proteolysis // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0004177 // aminopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // traceable author statement /// 0008239 // dipeptidyl-peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr9:140006934-140008957 (-) // 99.15 // q34.3"]
["11743618_at",0.019994736,-0.02562952,0.075567245,0.06264591,-0.019994259,-0.12963009,0.7399063,0.45247215,1.0369194,0.052303694,1.0369194,"up","ITGA2",3673,"0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // traceable author statement /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0009887 // organ morphogenesis // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0008305 // integrin complex // inferred from electronic annotation /// 0008305 // integrin complex // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045178 // basal part of cell // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // traceable author statement","chr5:52285155-52390608 (+) // 88.18 // q11.2"]
["11745298_s_at",0.01688099,-0.0061659813,-0.030057907,-0.22374582,0.12703943,0.0061659813,0.9384796,0.83031553,1.0165862,0.02373253,1.0165862,"up","ITFG2 /// LOC100507424","100507424 /// 55846","","","","chr12:2921830-2927662 (+) // 82.66 // p13.33"]
["11749972_a_at",-0.0809288,-0.2171936,-0.006980419,0.006980419,0.012106895,0.15862751,0.38486752,0.11173196,-1.1180147,-0.16093914,1.1180147,"down","TIE1",7075,"0001525 // angiogenesis // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007498 // mesoderm development // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from electronic annotation /// 0045026 // plasma membrane fusion // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr1:43766742-43774639 (+) // 99.91 // p34.2"]
["11719872_a_at",0.022267342,-0.2973776,-0.27829647,0.40651512,0.050263405,-0.022267342,0.40162462,0.121768,-1.2564088,-0.32930595,1.2564088,"down","LTV1",84946,"","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","","chr6:144164409-144184943 (+) // 96.75 // q24.2"]
["11723465_a_at",0.12717342,0.02982521,-0.02982521,0.14612961,-0.40010405,-0.35784245,0.5652823,0.24587296,1.1861858,0.24633005,1.1861858,"up","CELF2",10659,"0006376 // mRNA splice site selection // inferred from electronic annotation /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008016 // regulation of heart contraction // traceable author statement","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement","chr10:11047258-11378670 (+) // 98.66 // p14"]
["11722732_at",0.29493046,0.16752768,-0.010695934,0.010695457,-0.16213846,-0.19229126,0.30673474,0.07156306,1.2017739,0.26516548,1.2017739,"up","APPL1",26060,"0006915 // apoptotic process // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0008283 // cell proliferation // inferred from direct assay /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0046324 // regulation of glucose import // inferred from mutant phenotype /// 0090003 // regulation of establishment of protein localization in plasma membrane // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred by curator /// 0005768 // endosome // inferred from electronic annotation /// 0005792 // microsome // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0010008 // endosome membrane // inferred from direct assay /// 0010008 // endosome membrane // traceable author statement /// 0012506 // vesicle membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016581 // NuRD complex // inferred from direct assay /// 0031901 // early endosome membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0043422 // protein kinase B binding // inferred from physical interaction","chr3:57261764-57307486 (+) // 93.19 // p14.3"]
["11729530_a_at",-0.14882231,0.07085228,0.009599209,-0.023434162,-0.009599209,0.043295383,0.89178514,0.7215852,-1.018334,-0.026210867,1.018334,"down","ENTPD2",954,"0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0009181 // purine ribonucleoside diphosphate catabolic process // inferred from electronic annotation /// 0030168 // platelet activation // inferred from electronic annotation","0005605 // basal lamina // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017110 // nucleoside-diphosphatase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr9:139942552-139948527 (-) // 85.78 // q34.3"]
["11758680_s_at",-0.23491526,-0.07523799,0.05013442,0.16120791,-0.05013442,0.07797122,0.5350485,0.21932527,-1.1093295,-0.1496879,1.1093295,"down","UCHL1",7345,"0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007412 // axon target recognition // inferred from electronic annotation /// 0007628 // adult walking behavior // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0016579 // protein deubiquitination // inferred from direct assay /// 0019896 // axon transport of mitochondrion // inferred from electronic annotation /// 0042755 // eating behavior // inferred from electronic annotation /// 0043407 // negative regulation of MAP kinase activity // inferred from direct assay /// 0050905 // neuromuscular process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0004197 // cysteine-type endopeptidase activity // inferred from direct assay /// 0004221 // ubiquitin thiolesterase activity // traceable author statement /// 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0008242 // omega peptidase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0031694 // alpha-2A adrenergic receptor binding // inferred from physical interaction /// 0043130 // ubiquitin binding // inferred from direct assay /// 0043130 // ubiquitin binding // inferred from electronic annotation","chr4:41270151-41270414 (+) // 99.25 // p13"]
["11735149_at",-0.26981068,-0.08790922,0.054528713,-0.054528713,0.07722616,0.20634174,0.5294386,0.21441886,-1.130852,-0.17741011,1.130852,"down","ANGPTL6",83854,"0001525 // angiogenesis // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0030141 // secretory granule // inferred from electronic annotation","0005102 // receptor binding // inferred from electronic annotation","chr19:10203014-10213469 (-) // 93.56 // p13.2"]
["11732986_at",-0.099383116,0.41226244,0.1402669,-0.1525054,-0.05548048,0.05548072,0.5945555,0.27442598,1.1501993,0.20188385,1.1501993,"up","OR3A1",4994,"0007165 // signal transduction // non-traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // traceable author statement /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // traceable author statement","chr17:3194928-3195876 (-) // 100.0 // p13.3"]
["11758918_s_at",-0.3219471,-0.13809204,-0.21481228,0.15220833,0.13809204,0.22932148,0.06403394,0.0027405152,-1.317824,-0.39815772,1.317824,"down","KIFAP3 /// TFCP2","22920 /// 7024","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006461 // protein complex assembly // traceable author statement /// 0007017 // microtubule-based process // inferred from sequence or structural similarity /// 0007017 // microtubule-based process // inferred from electronic annotation /// 0007018 // microtubule-based movement // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008104 // protein localization // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0046587 // positive regulation of calcium-dependent cell-cell adhesion // inferred from electronic annotation /// 0072383 // plus-end-directed vesicle transport along microtubule // traceable author statement","0000794 // condensed nuclear chromosome // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005871 // kinesin complex // inferred from electronic annotation /// 0005876 // spindle microtubule // inferred from direct assay /// 0016939 // kinesin II complex // inferred from direct assay /// 0016939 // kinesin II complex // inferred from sequence or structural similarity /// 0016939 // kinesin II complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019894 // kinesin binding // inferred from physical interaction /// 0019894 // kinesin binding // inferred from electronic annotation","chr12:51487445-51566938 (-) // 91.42 // q13.12"]
["11729185_at",-0.06654549,-0.14011955,-0.109083176,0.23653412,0.19276619,0.06654549,0.10525335,0.008059933,-1.206252,-0.2705313,1.206252,"down","PNO1",56902,"","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation","chr2:68384962-68403595 (+) // 72.17 // p14"]
["11744451_a_at",0.020357132,-0.052726746,0.010328293,-0.053717613,-0.0019311905,0.0019311905,0.8976324,0.73482406,1.0073457,0.010558837,1.0073457,"up","DHX38",9785,"0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr16:72127910-72146811 (+) // 98.17 // q22.2"]
["11731692_a_at",-0.028233528,-0.07262683,0.013874769,-0.013874769,0.12586427,0.22548342,0.41088,0.12759365,-1.1030408,-0.14148617,1.1030408,"down","BPIFB2",80341,"","0005576 // extracellular region // inferred from electronic annotation","0008289 // lipid binding // inferred from electronic annotation","chr20:31595383-31611514 (+) // 91.95 // q11.21"]
["11731495_at",0.11658764,0.10498047,0.038631916,-0.038631916,-0.1464076,-0.15549135,0.121080995,0.010993541,1.1488924,0.20024368,1.1488924,"up","GDAP2",54834,"0032526 // response to retinoic acid // inferred from electronic annotation","","","chr1:118406108-118472302 (-) // 80.77 // p12"]
["11743996_a_at",0.11075497,0.11455631,0.018715858,-0.184412,-0.13765144,-0.018715858,0.1950875,0.028941255,1.144673,0.1949355,1.144673,"up","ACTR1A",10121,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0016192 // vesicle-mediated transport // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005869 // dynactin complex // traceable author statement /// 0005875 // microtubule associated complex // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation","chr10:104238985-104262509 (-) // 96.04 // q24.32"]
["11739342_a_at",-0.038083553,-0.09436464,-0.45919943,0.46882153,0.0557909,0.038083553,0.39344075,0.11687198,-1.3056618,-0.38478124,1.3056618,"down","TNFRSF10C",8794,"0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0045569 // TRAIL binding // inferred from electronic annotation","chr8:22960102-22974950 (+) // 98.11 // p21.3"]
["11721642_x_at",0.40229034,0.14547396,0.04013443,-0.040134907,-0.2054224,-0.2381239,0.2426261,0.04475775,1.2809315,0.3571933,1.2809315,"up","CAP2",10486,"0000902 // cell morphogenesis // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007163 // establishment or maintenance of cell polarity // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007190 // activation of adenylate cyclase activity // traceable author statement /// 0007411 // axon guidance // traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation","chr6:17393460-17558013 (+) // 94.85 // p22.3"]
["11735284_x_at",0.012963295,-0.100022316,-0.012963295,0.0631628,0.11806488,-0.029408455,0.51353836,0.20129831,-1.059914,-0.083947204,1.059914,"down","MLL5",55904,"0002446 // neutrophil mediated immunity // inferred from sequence or structural similarity /// 0002446 // neutrophil mediated immunity // inferred from electronic annotation /// 0006306 // DNA methylation // inferred from sequence or structural similarity /// 0006306 // DNA methylation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030218 // erythrocyte differentiation // inferred from sequence or structural similarity /// 0030218 // erythrocyte differentiation // inferred from electronic annotation /// 0030854 // positive regulation of granulocyte differentiation // inferred from mutant phenotype /// 0032259 // methylation // inferred from electronic annotation /// 0034968 // histone lysine methylation // inferred from electronic annotation /// 0042119 // neutrophil activation // inferred from sequence or structural similarity /// 0042119 // neutrophil activation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0048384 // retinoic acid receptor signaling pathway // inferred from mutant phenotype /// 0051568 // histone H3-K4 methylation // inferred from direct assay /// 0071300 // cellular response to retinoic acid // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation /// 0070688 // MLL5-L complex // inferred from direct assay","0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:104654636-104754531 (+) // 99.23 // q22.3"]
["11745649_s_at",0.06560707,0.025084496,-0.0006952286,0.0006952286,-0.053991318,-0.08574772,0.31270513,0.07413887,1.0543448,0.07634671,1.0543448,"up","SS18 /// SSX2","6757 /// 6760","0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048013 // ephrin receptor signaling pathway // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from direct assay","chr18:23612362-23670542 (-) // 78.09 // q11.2"]
["11730027_at",-0.28152132,0.011036396,-0.1434226,-0.011036396,0.08899975,0.22950172,0.35123727,0.09323006,-1.1813673,-0.24045755,1.1813673,"down","GPHA2",170589,"","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // inferred from electronic annotation","0005179 // hormone activity // inferred from electronic annotation","chr11:64701942-64702933 (-) // 88.38 // q13.1"]
["11760127_at",-0.10208702,-0.13449478,-0.03898239,0.45207024,0.29091454,0.03898239,0.24582621,0.046119478,-1.2767805,-0.3525105,1.2767805,"down","LIMS1",3987,"0007569 // cell aging // traceable author statement /// 0034329 // cell junction assembly // traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from expression pattern","0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:109150810-109303702 (+) // 82.8 // q12.3"]
["11754863_s_at",-0.12192631,0.016553879,-0.016553879,-0.049365997,0.1313219,0.07415581,0.56211674,0.2429668,-1.0663488,-0.0926794,1.0663488,"down","VPS37C",55048,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral reproduction // traceable author statement /// 0016044 // cellular membrane organization // traceable author statement /// 0016197 // endosomal transport // traceable author statement /// 0046788 // egress of virus within host cell // traceable author statement","0005768 // endosome // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","","chr11:60897729-60928925 (-) // 84.62 // q12.2"]
["11735443_at",-0.042307615,0.01885891,-0.003267765,-0.042270184,0.003267765,0.34211373,0.71713156,0.42041728,-1.0791852,-0.10994253,1.0791852,"down","ZNF781",163115,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:38158650-38183216 (-) // 98.6 // q13.12"]
["11716660_at",0.049613953,0.24165487,0.0069618225,-0.0069618225,-0.066934586,-0.07230425,0.3984882,0.1200157,1.1081427,0.14814372,1.1081427,"up","GRAMD4",23151,"0006915 // apoptotic process // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","","chr22:47016298-47075682 (+) // 96.08 // q13.31"]
["11732254_a_at",-1.1139269,0.10273695,0.04425049,-1.2209916,-0.010822296,0.010822296,0.960853,0.8886978,1.0604554,0.084684,1.0604554,"up","MED18",54797,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0016592 // mediator complex // inferred from direct assay /// 0016592 // mediator complex // inferred from electronic annotation","0001104 // RNA polymerase II transcription cofactor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:28655480-28662478 (+) // 67.38 // p35.3"]
["11725267_a_at",-0.0198133,0.047460556,0.17624378,-0.18629766,0.0198133,-0.0936811,0.42282403,0.13521509,1.113179,0.15468556,1.113179,"up","FAT4",79633,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr4:126237566-126414087 (+) // 98.87 // q28.1"]
["11733439_a_at",0.31110334,0.17408681,-0.049954653,-0.0036070347,-0.021171808,0.0036070347,0.53935045,0.22271104,1.1112133,0.1521358,1.1112133,"up","GBP5",115362,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0071346 // cellular response to interferon-gamma // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr1:89724635-89735258 (-) // 77.29 // p22.2"]
["11740317_at",-0.097355366,0.08093929,-0.014385223,0.014385223,-0.06847191,0.06353378,0.9443189,0.8449629,-1.0093427,-0.01341605,1.0093427,"down","MIP",4284,"0002088 // lens development in camera-type eye // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0006833 // water transport // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0015722 // canalicular bile acid transport // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0005921 // gap junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0046691 // intracellular canaliculus // inferred from electronic annotation","0005212 // structural constituent of eye lens // inferred from electronic annotation /// 0005215 // transporter activity // traceable author statement /// 0005215 // transporter activity // inferred from electronic annotation /// 0015250 // water channel activity // inferred from electronic annotation","chr12:56843285-56848435 (-) // 94.06 // q13.3"]
["11750063_a_at",0.05265045,-0.11852312,-0.05265045,-0.086652756,0.2966962,0.07589817,0.6471495,0.33027703,-1.097957,-0.13482158,1.097957,"down","ANKRD35",148741,"","","","chr1:145549243-145561166 (+) // 94.59 // q21.1"]
["11753821_x_at",0.1471653,0.13033676,0.09718132,-0.13426399,-0.15079308,-0.097182274,0.026323777,0.0003074971,1.1911107,0.25230753,1.1911107,"up","OAZ1",4946,"0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006596 // polyamine biosynthetic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005829 // cytosol // traceable author statement","0004857 // enzyme inhibitor activity // inferred from electronic annotation /// 0008073 // ornithine decarboxylase inhibitor activity // inferred from electronic annotation /// 0008073 // ornithine decarboxylase inhibitor activity // traceable author statement","chr19:2269556-2271483 (+) // 100.0 // p13.3"]
["11746856_a_at",0.20501328,0.21613598,0.17624378,-0.29546356,-0.32691526,-0.1762433,0.033674676,0.00060374127,1.3806411,0.46533832,1.3806411,"up","SERPINE1",5054,"0000302 // response to reactive oxygen species // inferred from electronic annotation /// 0001300 // chronological cell aging // inferred from expression pattern /// 0001525 // angiogenesis // inferred from expression pattern /// 0002576 // platelet degranulation // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010469 // regulation of receptor activity // inferred from direct assay /// 0010757 // negative regulation of plasminogen activation // inferred from direct assay /// 0010757 // negative regulation of plasminogen activation // inferred from mutant phenotype /// 0010951 // negative regulation of endopeptidase activity // inferred from direct assay /// 0014912 // negative regulation of smooth muscle cell migration // inferred from direct assay /// 0030168 // platelet activation // traceable author statement /// 0030194 // positive regulation of blood coagulation // inferred from mutant phenotype /// 0030195 // negative regulation of blood coagulation // inferred by curator /// 0030336 // negative regulation of cell migration // inferred from direct assay /// 0032757 // positive regulation of interleukin-8 production // inferred from mutant phenotype /// 0033629 // negative regulation of cell adhesion mediated by integrin // inferred from direct assay /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0035491 // positive regulation of leukotriene production involved in inflammatory response // inferred from mutant phenotype /// 0042060 // wound healing // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042246 // tissue regeneration // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0042730 // fibrinolysis // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0045765 // regulation of angiogenesis // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype /// 0048260 // positive regulation of receptor-mediated endocytosis // inferred from direct assay /// 0048260 // positive regulation of receptor-mediated endocytosis // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred from genetic interaction /// 0050820 // positive regulation of coagulation // inferred from electronic annotation /// 0050829 // defense response to Gram-negative bacterium // inferred from genetic interaction /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051918 // negative regulation of fibrinolysis // inferred from direct assay /// 0055093 // response to hyperoxia // inferred from electronic annotation /// 0061044 // negative regulation of vascular wound healing // inferred from genetic interaction /// 0061045 // negative regulation of wound healing // inferred by curator /// 0070887 // cellular response to chemical stimulus // inferred from mutant phenotype /// 0071222 // cellular response to lipopolysaccharide // inferred from mutant phenotype /// 0071258 // cellular response to gravity // inferred from electronic annotation /// 0090026 // positive regulation of monocyte chemotaxis // inferred from mutant phenotype /// 2000098 // negative regulation of smooth muscle cell-matrix adhesion // inferred from direct assay","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0031093 // platelet alpha granule lumen // traceable author statement","0002020 // protease binding // inferred from physical interaction /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from direct assay /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from physical interaction /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr7:100770383-100781574 (+) // 89.86 // q22.1"]
["11722420_a_at",0.055828094,-0.1434803,-0.05248499,0.26110315,0.052484512,-0.12507725,0.7253528,0.43229592,-1.078891,-0.109549165,1.078891,"down","PPP3CC",5533,"0006915 // apoptotic process // traceable author statement /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement","0005829 // cytosol // traceable author statement","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:22298331-22398979 (+) // 97.52 // p21.3"]
["11744908_a_at",0.015407085,0.0437932,0.08646345,-0.015407085,-0.12927914,-0.09053421,0.20509844,0.031935036,1.0919913,0.12696137,1.0919913,"up","CCDC23",374969,"0009306 // protein secretion // inferred from direct assay /// 0010596 // negative regulation of endothelial cell migration // inferred from genetic interaction /// 0031397 // negative regulation of protein ubiquitination // inferred from direct assay","0045177 // apical part of cell // inferred from direct assay","","chr1:43272726-43282936 (-) // 89.3 // p34.2"]
["11730921_at",-0.055496693,-0.032575607,-0.06914377,0.2089529,0.08048439,0.032575607,0.23230934,0.041010983,-1.1170881,-0.15974294,1.1170881,"down","NHLRC4",283948,"","","","chr16:617004-619494 (+) // 87.34 // p13.3"]
["11721270_at",-0.21905947,0.033726215,0.26458025,0.13806272,-0.033726215,-0.07570243,0.9711366,0.91815364,1.0117627,0.016871013,1.0117627,"up","SCG3",29106,"0002576 // platelet degranulation // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030141 // secretory granule // traceable author statement /// 0030658 // transport vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","","chr15:51973549-52013222 (+) // 85.87 // q21.2"]
["11724169_s_at",0.1392231,0.025814533,-0.025814533,-0.07113886,-0.31821394,0.051341534,0.57242155,0.2526349,1.1165735,0.15907817,1.1165735,"up","ZNF322 /// ZNF322P1","387328 /// 79692","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:26634611-26659963 (-) // 98.71 // p22.2 /// chr9:99957632-99962422 (-) // 98.32 // q22.33"]
["11745194_a_at",-0.0804081,-0.2612896,-0.19905949,0.21058655,0.1838026,0.0804081,0.09763451,0.0069386885,-1.2644571,-0.33851808,1.2644571,"down","OXCT1",5019,"0007420 // brain development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042594 // response to starvation // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045471 // response to ethanol // inferred from electronic annotation /// 0046950 // cellular ketone body metabolic process // inferred from mutant phenotype /// 0046950 // cellular ketone body metabolic process // traceable author statement /// 0046950 // cellular ketone body metabolic process // inferred from electronic annotation /// 0046952 // ketone body catabolic process // traceable author statement /// 0046952 // ketone body catabolic process // inferred from electronic annotation /// 0060612 // adipose tissue development // inferred from electronic annotation /// 0071229 // cellular response to acid // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0008260 // 3-oxoacid CoA-transferase activity // inferred from mutant phenotype /// 0008260 // 3-oxoacid CoA-transferase activity // traceable author statement /// 0008260 // 3-oxoacid CoA-transferase activity // inferred from electronic annotation /// 0008410 // CoA-transferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // non-traceable author statement /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr5:41730168-41870561 (-) // 98.96 // p13.1"]
["11722271_at",0.31620502,0.19915867,0.055078506,-0.107806206,-0.05578041,-0.055078506,0.19026607,0.027436638,1.2000011,0.26303574,1.2000011,"up","MSANTD4",84437,"","0005634 // nucleus // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation","chr11:105878646-105892960 (-) // 89.91 // q22.3"]
["11764000_at",-0.23897481,-0.15861607,-0.029826164,0.1338048,0.09510803,0.029826164,0.19280477,0.028279595,-1.1717937,-0.2287186,1.1717937,"down","C5orf63",401207,"0006810 // transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation","","chr5:126378253-126378735 (-) // 96.98 // q23.2"]
["11722368_a_at",-0.08500719,-0.014497995,-0.013496399,0.32633114,0.13313484,0.013496399,0.3762279,0.10670263,-1.1449791,-0.19532129,1.1449791,"down","TRIM22",10346,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0009615 // response to virus // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0070206 // protein trimerization // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0015030 // Cajal body // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:5710839-5732093 (+) // 76.92 // p15.4"]
["11725403_at",-0.054512262,-0.053593397,0.013152361,0.05509758,-0.013152361,0.10933852,0.401789,0.12186664,-1.0585424,-0.082079016,1.0585424,"down","TM4SF18",116441,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:149036286-149051548 (-) // 66.05 // q25.1"]
["11762355_at",0.2999544,0.23785734,0.22391224,-0.22391224,-0.36704493,-0.23568153,0.031232014,0.0005043165,1.4433831,0.52945423,1.4433831,"up","LOC554207",554207,"","","","chr14:21576201-21584861 (+) // 83.02 // q11.2"]
["11726591_s_at",0.02562356,-0.017464876,0.33953285,-0.1060493,0.007207155,-0.007206917,0.58851224,0.26919416,1.1105288,0.15124685,1.1105288,"up","ELOVL4",6785,"0006633 // fatty acid biosynthetic process // non-traceable author statement /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0009584 // detection of visible light // non-traceable author statement /// 0019367 // fatty acid elongation, saturated fatty acid // inferred from direct assay /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0035338 // long-chain fatty-acyl-CoA biosynthetic process // traceable author statement /// 0042761 // very long-chain fatty acid biosynthetic process // inferred from direct assay /// 0042761 // very long-chain fatty acid biosynthetic process // inferred from sequence or structural similarity /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008020 // G-protein coupled photoreceptor activity // non-traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation","chr6:80624530-80657315 (-) // 96.99 // q14.1"]
["11749967_a_at",-0.23550367,0.11166668,0.0068371296,-0.054837942,-0.0068371296,0.077910185,0.88510084,0.7067738,-1.0312625,-0.04441163,1.0312625,"down","GABRB2",2561,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from electronic annotation /// 0007214 // gamma-aminobutyric acid signaling pathway // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0034220 // ion transmembrane transport // traceable author statement /// 0043526 // neuroprotection // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation /// 0051932 // synaptic transmission, GABAergic // inferred from sequence or structural similarity /// 0055085 // transmembrane transport // traceable author statement /// 0060119 // inner ear receptor cell development // inferred from electronic annotation /// 0060384 // innervation // inferred from electronic annotation /// 0090102 // cochlea development // inferred from electronic annotation","0005624 // membrane fraction // inferred from sequence or structural similarity /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0034707 // chloride channel complex // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004890 // GABA-A receptor activity // inferred from sequence or structural similarity /// 0004890 // GABA-A receptor activity // inferred from electronic annotation /// 0004890 // GABA-A receptor activity // traceable author statement /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0005237 // inhibitory extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from electronic annotation","chr5:160886140-160975401 (-) // 99.4 // q34"]
["11730742_x_at",0.07629776,0.03702736,-0.030621529,0.014247894,-0.014247894,-0.103681564,0.5790731,0.25927362,1.0440048,0.062128343,1.0440048,"up","AKIRIN1",79647,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","","chr1:39456894-39471989 (+) // 87.26 // p34.3"]
["11736201_x_at",-0.29429674,0.19384336,0.20903444,-0.21745157,-0.19384336,0.43217802,0.97135746,0.918815,1.0204692,0.029232623,1.0204692,"up","GLUD2",2747,"0006520 // cellular amino acid metabolic process // inferred from electronic annotation /// 0006536 // glutamate metabolic process // inferred from direct assay /// 0006537 // glutamate biosynthetic process // inferred from direct assay /// 0006538 // glutamate catabolic process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004352 // glutamate dehydrogenase (NAD+) activity // inferred from direct assay /// 0004353 // glutamate dehydrogenase [NAD(P)+] activity // inferred from direct assay /// 0004353 // glutamate dehydrogenase [NAD(P)+] activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0043531 // ADP binding // inferred from direct assay /// 0070728 // leucine binding // inferred from direct assay","chrX:120181448-120183932 (+) // 97.01 // q24"]
["11717197_x_at",0.048787117,-0.051527977,0.06453133,0.097685814,-0.048787117,-0.16739559,0.78292406,0.51784414,1.042535,0.060095746,1.042535,"up","SCFD1",23256,"0001666 // response to hypoxia // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // inferred from sequence or structural similarity /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // inferred from sequence or structural similarity /// 0006892 // post-Golgi vesicle-mediated transport // inferred from electronic annotation /// 0006904 // vesicle docking involved in exocytosis // inferred from electronic annotation /// 0009636 // response to toxin // inferred from expression pattern /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0060628 // regulation of ER to Golgi vesicle-mediated transport // inferred from sequence or structural similarity /// 0060628 // regulation of ER to Golgi vesicle-mediated transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005798 // Golgi-associated vesicle // inferred from sequence or structural similarity /// 0005798 // Golgi-associated vesicle // inferred from electronic annotation /// 0005801 // cis-Golgi network // inferred from direct assay /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0017119 // Golgi transport complex // inferred from sequence or structural similarity /// 0017119 // Golgi transport complex // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0019905 // syntaxin binding // inferred from sequence or structural similarity /// 0047485 // protein N-terminus binding // inferred from electronic annotation","chr14:31091317-31205005 (+) // 96.66 // q12"]
["11745488_s_at",0.054383516,-0.059326887,0.20247841,-0.402977,-0.054383278,0.3165517,0.8501645,0.6369013,1.0813107,0.11278118,1.0813107,"up","LILRA6 /// LILRB3 /// LOC100291689","100291689 /// 11025 /// 79168","0006952 // defense response // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0045671 // negative regulation of osteoclast differentiation // inferred from direct assay","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr19:54720736-54746724 (-) // 97.91 // q13.42"]
["11754099_a_at",0.48919487,0.06500864,-0.12884903,0.17921638,-0.06500864,-0.22429705,0.7425724,0.45693326,1.1316919,0.17848128,1.1316919,"up","SEC16A",9919,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0048208 // COPII vesicle coating // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","","chr9:139335980-139371533 (-) // 99.88 // q34.3"]
["11760767_at",0.22184277,-0.12792826,-0.20545197,-0.18849993,0.20840788,0.12792826,0.8589349,0.65388256,-1.0617602,-0.08645795,1.0617602,"down","ALG9",79796,"0006486 // protein glycosylation // inferred from electronic annotation /// 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0006506 // GPI anchor biosynthetic process // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031227 // intrinsic to endoplasmic reticulum membrane // inferred from electronic annotation","0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0052918 // dol-P-Man:Man(8)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity // inferred from electronic annotation /// 0052926 // dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity // inferred from electronic annotation","chr11:111657004-111742284 (-) // 94.04 // q23.1"]
["11734942_a_at",0.15473032,-0.20345116,-0.1284113,-0.072478294,0.095532894,0.072478294,0.7680356,0.49459434,-1.0650258,-0.09088839,1.0650258,"down","FAM212B",55924,"","","","chr1:112267931-112282046 (-) // 81.43 // p13.2"]
["11721441_x_at",-0.10727024,-0.4076352,-0.42058086,0.55152416,0.19038773,0.10727024,0.1823609,0.02514177,-1.5103569,-0.5948895,1.5103569,"down","C1orf63",57035,"","","","chr1:25568739-25574002 (-) // 95.73 // p36.11"]
["11719123_a_at",0.08522987,-0.031564713,-0.06673813,0.11148071,0.031564713,-0.11146259,0.9500268,0.8610429,-1.0103711,-0.014885263,1.0103711,"down","TIMELESS",8914,"0002009 // morphogenesis of an epithelium // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007623 // circadian rhythm // inferred from sequence or structural similarity /// 0007623 // circadian rhythm // traceable author statement /// 0009582 // detection of abiotic stimulus // traceable author statement /// 0009628 // response to abiotic stimulus // traceable author statement /// 0033261 // regulation of S phase // inferred from mutant phenotype /// 0042127 // regulation of cell proliferation // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0048511 // rhythmic process // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr12:56810157-56843191 (-) // 91.81 // q13.3"]
["11720044_at",0.102543354,-0.04642582,0.0065550804,0.17220068,-0.025956154,-0.0065555573,0.90729356,0.75456846,-1.0179539,-0.025672188,1.0179539,"down","SKAP2",8935,"0006461 // protein complex assembly // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0042113 // B cell activation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay","0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005543 // phospholipid binding // inferred from electronic annotation","chr7:26706686-26904385 (-) // 93.27 // p15.2"]
["11749423_a_at",-0.02951336,0.0114917755,-0.026726723,-0.0114917755,0.104577065,0.013251305,0.5722937,0.25246742,-1.0355245,-0.05036167,1.0355245,"down","LIG1",3978,"0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0000722 // telomere maintenance via recombination // traceable author statement /// 0000723 // telomere maintenance // traceable author statement /// 0000724 // double-strand break repair via homologous recombination // traceable author statement /// 0006259 // DNA metabolic process // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0006266 // DNA ligation // inferred from direct assay /// 0006266 // DNA ligation // inferred from electronic annotation /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement /// 0006273 // lagging strand elongation // not recorded /// 0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006284 // base-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // not recorded /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006297 // nucleotide-excision repair, DNA gap filling // traceable author statement /// 0006302 // double-strand break repair // traceable author statement /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0032201 // telomere maintenance via semi-conservative replication // traceable author statement /// 0033151 // V(D)J recombination // inferred from direct assay /// 0051103 // DNA ligation involved in DNA repair // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // not recorded /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // not recorded /// 0005739 // mitochondrion // not recorded","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003909 // DNA ligase activity // inferred from direct assay /// 0003909 // DNA ligase activity // inferred from electronic annotation /// 0003910 // DNA ligase (ATP) activity // not recorded /// 0003910 // DNA ligase (ATP) activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:48618724-48657356 (-) // 97.64 // q13.33"]
["11727815_at",0.21783018,0.008303165,0.020662785,-0.008303165,-0.15320587,-0.28173733,0.3488897,0.0917588,1.1728464,0.23001413,1.1728464,"up","UBASH3B",84959,"0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr11:122525899-122685185 (+) // 97.6 // q24.1"]
["11742827_a_at",0.01790762,-0.017908096,0.032797813,0.23434258,-0.17670107,-0.08496237,0.95819604,0.88085365,1.0139872,0.020039417,1.0139872,"up","PHF3",23469,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // non-traceable author statement","0005634 // nucleus // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:64356430-64424691 (+) // 98.28 // q12"]
["11759374_at",0.13373518,0.1340394,0.20520687,-0.27125597,-0.18421745,-0.13373518,0.05056261,0.0016193957,1.2781554,0.3540633,1.2781554,"up","HIST1H3A /// HIST1H3B /// HIST1H3C /// HIST1H3D /// HIST1H3E /// HIST1H3F /// HIST1H3G /// HIST1H3H /// HIST1H3I /// HIST1H3J","8350 /// 8351 /// 8352 /// 8353 /// 8354 /// 8355 /// 8356 /// 8357 /// 8358 /// 8968","0006334 // nucleosome assembly // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0051320 // S phase // non-traceable author statement /// 0060968 // regulation of gene silencing // inferred from direct assay","0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26271202-26272043 (-) // 83.41 // p22.2"]
["11744862_x_at",0.06732559,0.01902771,0.12111473,-0.05763817,-0.01902771,-0.14566803,0.22861278,0.03976136,1.1044035,0.14326736,1.1044035,"up","DHRS7",51635,"0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation","chr14:60611496-60636581 (-) // 85.48 // q23.1"]
["11740847_a_at",-0.079573154,-0.04201317,0.052629948,-0.21098876,0.06492305,0.04201317,0.96755445,0.90959215,1.0081419,0.011698683,1.0081419,"up","ZNF229",7772,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:44930425-44952626 (-) // 79.99 // q13.31"]
["11760698_at",-0.13843226,0.13055253,0.095288515,-0.095288515,-0.14706564,0.30733728,0.9886276,0.96635854,1.0051949,0.00747526,1.0051949,"up","AGBL2",79841,"0006508 // proteolysis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation","0004180 // carboxypeptidase activity // inferred from electronic annotation /// 0004181 // metallocarboxypeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:47688167-47736921 (-) // 97.6 // p11.2"]
["11751699_a_at",0.05008459,-0.050085068,0.120308876,0.06985569,-0.1298132,-0.22095251,0.5677371,0.24845035,1.0971338,0.13373941,1.0971338,"up","USP3",9960,"0000278 // mitotic cell cycle // inferred from mutant phenotype /// 0006281 // DNA repair // inferred from mutant phenotype /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016578 // histone deubiquitination // inferred from direct assay /// 0031647 // regulation of protein stability // inferred from direct assay","0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004221 // ubiquitin thiolesterase activity // inferred from mutant phenotype /// 0004843 // ubiquitin-specific protease activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042393 // histone binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:63796854-63866580 (+) // 100.0 // q22.31"]
["11758302_x_at",-0.020866394,-0.022158623,0.020865917,-0.037704468,0.040697575,0.058728218,0.7325002,0.4420063,-1.0195695,-0.027960144,1.0195695,"down","LOC100128326 /// LOC100132050 /// LOC100132062 /// LOC100133161 /// LOC100508632 /// LOC100652945 /// LOC100653241 /// LOC100653346 /// LOC729737","100128326 /// 100132050 /// 100132062 /// 100133161 /// 100508632 /// 100652945 /// 100653241 /// 100653346 /// 729737","","","","chr1:324237-325595 (+) // 87.68 // p36.33 /// chr1:228155040-228156398 (+) // 86.46 // q42.13 /// chr5:180750852-180752210 (+) // 87.83 // q35.3 /// chr1:664027-665385 (-) // 88.06 // p36.33 /// chr1:138539-139897 (-) // 87.53 // p36.33 /// chr1:243219415-243220773 (-) // 86.84 // q43 /// chr1:222649338-222650696 (-) // 86.24 // q41 /// chr11:130216-131574 (-) // 87.6 // p15.5"]
["11736855_a_at",-0.20584154,0.1870985,0.11625862,-0.1830368,-0.11625862,0.22036266,0.9064471,0.75206023,1.0416107,0.0588162,1.0416107,"up","ATP6V1C2",245973,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0033572 // transferrin transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005829 // cytosol // traceable author statement /// 0033180 // proton-transporting V-type ATPase, V1 domain // inferred from electronic annotation","0008553 // hydrogen-exporting ATPase activity, phosphorylative mechanism // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation","chr2:10862948-10925228 (+) // 96.44 // p25.1"]
["11730628_a_at",-0.14403248,-0.058059692,0.07541847,-0.06477547,0.058059692,0.1813097,0.6658406,0.3523884,-1.0720874,-0.10042253,1.0720874,"down","SPHKAP",80309,"0016310 // phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0051018 // protein kinase A binding // inferred from direct assay","chr2:228844670-229046836 (-) // 99.1 // q36.3"]
["11761837_at",-0.17984915,-0.07833147,0.24778843,-0.092960835,0.07833147,0.20801735,0.87435645,0.6851294,-1.0482092,-0.06792666,1.0482092,"down","RALGPS1",9649,"0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // non-traceable author statement","0005622 // intracellular // non-traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // non-traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation","chr9:129677070-129946599 (+) // 79.44 // q33.3"]
["11743414_a_at",-0.13188982,0.050127506,-0.12105799,0.066185,-0.026701927,0.026701927,0.55753016,0.2386561,-1.0641255,-0.089668356,1.0641255,"down","UBE2K",3093,"0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0016567 // protein ubiquitination // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0034450 // ubiquitin-ubiquitin ligase activity // inferred from direct assay","chr4:39699660-39784408 (+) // 97.23 // p14"]
["11754875_a_at",-0.06509638,0.16432643,0.11814284,0.029976606,-0.029976606,-0.103922606,0.5718697,0.2519131,1.0770599,0.10709844,1.0770599,"up","C20orf96",140680,"","","","chr20:251505-266152 (-) // 77.51 // p13"]
["11720763_a_at",-0.19570875,0.056204796,0.059755325,-0.13189411,-0.056204796,0.19127512,0.94272995,0.8409708,-1.0193444,-0.027641637,1.0193444,"down","SELPLG",6404,"0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0050901 // leukocyte tethering or rolling // inferred from electronic annotation /// 0050902 // leukocyte adhesive activation // inferred from sequence or structural similarity /// 0071354 // cellular response to interleukin-6 // inferred from direct assay","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005102 // receptor binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0051635 // bacterial cell surface binding // traceable author statement","chr12:109015682-109027735 (-) // 96.56 // q24.11"]
["11724919_a_at",0.11865044,0.02079773,-0.02079773,-0.023842812,0.037631035,-0.13844967,0.607142,0.28716788,1.0578272,0.081104025,1.0578272,"up","HSD17B8",7923,"0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006703 // estrogen biosynthetic process // inferred from direct assay /// 0006703 // estrogen biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008209 // androgen metabolic process // inferred from electronic annotation /// 0008210 // estrogen metabolic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005740 // mitochondrial envelope // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from direct assay /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003857 // 3-hydroxyacyl-CoA dehydrogenase activity // inferred from direct assay /// 0004303 // estradiol 17-beta-dehydrogenase activity // inferred from direct assay /// 0004303 // estradiol 17-beta-dehydrogenase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0050327 // testosterone 17-beta-dehydrogenase (NAD+) activity // inferred from electronic annotation","chr6:33172472-33174607 (+) // 91.31 // p21.32"]
["11743555_a_at",-0.12558174,-0.0813365,-0.1915536,0.17964172,0.2666607,0.08133602,0.10372296,0.00776741,-1.238594,-0.30870342,1.238594,"down","QTRTD1",79691,"0006400 // tRNA modification // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from electronic annotation /// 0008616 // queuosine biosynthetic process // inferred from electronic annotation /// 0008616 // queuosine biosynthetic process // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation","0008479 // queuine tRNA-ribosyltransferase activity // inferred from sequence or structural similarity /// 0008479 // queuine tRNA-ribosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:113775583-113807379 (+) // 78.74 // q13.31"]
["11726603_at",0.16002464,0.12895393,0.10990906,-0.10990906,-0.19355488,-0.15326214,0.032238625,0.00053975795,1.218583,0.2852045,1.218583,"up","DARS2",55157,"0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0043039 // tRNA aminoacylation // inferred from direct assay /// 0070145 // mitochondrial asparaginyl-tRNA aminoacylation // inferred by curator","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred by curator /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0000049 // tRNA binding // traceable author statement /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004815 // aspartate-tRNA ligase activity // traceable author statement /// 0004815 // aspartate-tRNA ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // traceable author statement /// 0016874 // ligase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0050560 // aspartate-tRNA(Asn) ligase activity // inferred from direct assay","chr1:173793599-173828000 (+) // 87.41 // q25.1"]
["11737424_at",0.03673792,0,-0.03673792,-0.115014315,0.012829304,0,0.77079296,0.49877933,1.0238906,0.034061596,1.0238906,"up","MS4A2",2206,"0006954 // inflammatory response // inferred from electronic annotation /// 0006959 // humoral immune response // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // inferred from electronic annotation /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0038095 // Fc-epsilon receptor signaling pathway // inferred from electronic annotation /// 0043306 // positive regulation of mast cell degranulation // inferred from electronic annotation /// 0050663 // cytokine secretion // inferred from electronic annotation /// 0051279 // regulation of release of sequestered calcium ion into cytosol // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // traceable author statement","0005768 // endosome // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032998 // Fc-epsilon receptor I complex // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005262 // calcium channel activity // traceable author statement /// 0019767 // IgE receptor activity // inferred from electronic annotation /// 0019863 // IgE binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0042169 // SH2 domain binding // inferred from electronic annotation /// 0051219 // phosphoprotein binding // inferred from electronic annotation","chr11:59856136-59866017 (+) // 91.6 // q12.1"]
["11731481_a_at",0.17212391,0.0046396255,0.017838478,-0.024671555,-0.080451965,-0.0046396255,0.45475206,0.15708207,1.072855,0.1014551,1.072855,"up","STK25",10494,"0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006979 // response to oxidative stress // traceable author statement /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0050772 // positive regulation of axonogenesis // inferred from electronic annotation /// 0051645 // Golgi localization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:242434432-242448103 (-) // 95.41 // q37.3"]
["11751181_a_at",-0.12365031,0.008259773,-0.008259535,-0.06948018,0.01582408,0.058398724,0.7629711,0.48725426,-1.0301094,-0.04279757,1.0301094,"down","ZNF763",284390,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:12075868-12090295 (+) // 100.0 // p13.2"]
["11727505_at",0.14670944,0.037532806,0.019612312,-0.11003208,-0.019612312,-0.20922184,0.27072975,0.055549063,1.1335963,0.18090695,1.1335963,"up","RAB21",23011,"0006184 // GTP catabolic process // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from electronic annotation /// 0019003 // GDP binding // inferred from direct assay","chr12:72148646-72182536 (+) // 86.61 // q21.1"]
["11733027_at",-0.05758524,0.110230446,0.10694933,-0.42860126,-0.23348331,0.05758524,0.47011307,0.16853346,1.1930859,0.25469792,1.1930859,"up","CLCA2",9635,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // traceable author statement /// 0006821 // chloride transport // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009925 // basal plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005254 // chloride channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // traceable author statement /// 0015276 // ligand-gated ion channel activity // inferred from electronic annotation","chr1:86889565-86922236 (+) // 98.27 // p22.3"]
["11755764_a_at",-0.10165119,-0.029834032,-0.105005026,0.029833794,0.14390874,0.10462308,0.1382549,0.014406275,-1.1263214,-0.17161861,1.1263214,"down","PKD1L2",114780,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr16:81134484-81147586 (-) // 57.89 // q23.2"]
["11733024_x_at",0.15285015,0.11661816,0.015230179,-0.015230179,-0.06925106,-0.21511841,0.2694651,0.05491756,1.1445385,0.19476601,1.1445385,"up","BTG1",694,"0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006479 // protein methylation // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0016477 // cell migration // non-traceable author statement /// 0030308 // negative regulation of cell growth // non-traceable author statement /// 0042981 // regulation of apoptotic process // inferred from mutant phenotype /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0045603 // positive regulation of endothelial cell differentiation // inferred from mutant phenotype /// 0045663 // positive regulation of myoblast differentiation // inferred from direct assay /// 0045663 // positive regulation of myoblast differentiation // non-traceable author statement /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from mutant phenotype /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from mutant phenotype","0003712 // transcription cofactor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0019900 // kinase binding // non-traceable author statement","chr12:92534055-92539673 (-) // 97.05 // q21.33"]
["11731810_x_at",-0.15442228,0.40129304,0.13713121,-0.053870678,0.053870678,-0.16018343,0.6650176,0.35101405,1.1339799,0.18139508,1.1339799,"up","FCRL4",83417,"","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:157543538-157567870 (-) // 71.26 // q23.1"]
["11729017_a_at",-0.18038654,-0.0027041435,-0.08854866,0.0027041435,0.1348424,0.27839375,0.3092642,0.072759576,-1.1721792,-0.22919317,1.1721792,"down","SYT2",127833,"0006810 // transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042584 // chromaffin granule membrane // inferred from electronic annotation /// 0042598 // vesicular fraction // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045202 // synapse // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005544 // calcium-dependent phospholipid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:202559723-202612581 (-) // 94.16 // q32.1"]
["11726937_at",0.025736332,-0.03229046,0,0,0.09285164,-0.18047833,0.9086946,0.7582113,1.0189083,0.027024163,1.0189083,"up","ST18",9705,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:53023397-53322439 (-) // 97.27 // q11.23"]
["11762104_at",-0.20199633,-0.013014078,0.01301384,0.09545684,0.12938213,-0.08921981,0.62537247,0.3058558,-1.081129,-0.11253861,1.081129,"down","MOCS1",4337,"0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006777 // Mo-molybdopterin cofactor biosynthetic process // inferred from direct assay /// 0006777 // Mo-molybdopterin cofactor biosynthetic process // inferred from mutant phenotype /// 0006777 // Mo-molybdopterin cofactor biosynthetic process // traceable author statement /// 0006777 // Mo-molybdopterin cofactor biosynthetic process // inferred from electronic annotation /// 0032324 // molybdopterin cofactor biosynthetic process // traceable author statement /// 0032324 // molybdopterin cofactor biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005634 // nucleus // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0019008 // molybdopterin synthase complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from direct assay /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation","chr6:39867355-39900171 (-) // 85.37 // p21.2"]
["11716520_at",-0.016962528,0.15979433,0.08402729,-0.15716362,-0.1341691,0.016962528,0.3440724,0.089426465,1.1227809,0.16707645,1.1227809,"up","C10orf10",11067,"","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","","chr10:45471576-45474360 (-) // 91.47 // q11.21"]
["11754177_a_at",-0.19856977,0.08551741,0.19282484,-0.08551741,-0.26345682,0.24666929,0.9112066,0.76501137,1.0429662,0.060692467,1.0429662,"up","RRM2B",50484,"0001822 // kidney development // inferred from electronic annotation /// 0003014 // renal system process // inferred from electronic annotation /// 0006260 // DNA replication // inferred from electronic annotation /// 0006264 // mitochondrial DNA replication // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0009186 // deoxyribonucleoside diphosphate metabolic process // inferred from electronic annotation /// 0009200 // deoxyribonucleoside triphosphate metabolic process // inferred from electronic annotation /// 0009263 // deoxyribonucleotide biosynthetic process // inferred from electronic annotation /// 0015949 // nucleobase-containing small molecule interconversion // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","0004748 // ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046914 // transition metal ion binding // inferred from electronic annotation","chr8:103220252-103226457 (-) // 99.64 // q22.3"]
["11740563_at",0.3325901,0.01867485,0.06945515,-0.01867485,-0.020460129,-0.17486334,0.4106333,0.12729095,1.1579499,0.21157286,1.1579499,"up","EVPLL",645027,"","","","chr17:18281078-18292961 (+) // 96.03 // p11.2"]
["11751605_a_at",0.052646875,0.011442661,0.036991358,-0.30005193,-0.18507624,-0.011442661,0.32174757,0.078438796,1.1480752,0.19921717,1.1480752,"up","SP140",11262,"0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006952 // defense response // traceable author statement","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:231090443-231176192 (+) // 99.81 // q37.1"]
["11723650_a_at",-0.061473846,-0.035307884,-0.1283102,0.18079758,0.035307884,0.0492754,0.22561495,0.038842585,-1.1199939,-0.1634909,1.1199939,"down","CIAO1",9391,"0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0016226 // iron-sulfur cluster assembly // inferred from genetic interaction","0071817 // MMXD complex // inferred from direct assay","","chr2:96931869-96938583 (+) // 50.59 // q11.2"]
["11740026_at",-0.013392925,0.013392925,-0.4702072,-0.07667637,0.10093975,0.07988691,0.6326376,0.31459618,-1.1419128,-0.1914525,1.1419128,"down","LOC200726",200726,"","","","chr2:207507141-207514173 (+) // 94.34 // q33.3"]
["11727672_a_at",-0.21591568,0.01956129,-0.002403736,-0.43667364,0.002403736,0.1467123,0.9592316,0.88424474,1.020729,0.02959981,1.020729,"up","MICAL2",9645,"0008152 // metabolic process // inferred from electronic annotation /// 0030042 // actin filament depolymerization // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0003779 // actin binding // inferred from sequence or structural similarity /// 0003779 // actin binding // inferred from electronic annotation /// 0004497 // monooxygenase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016709 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0071949 // FAD binding // inferred from sequence or structural similarity","chr11:12132122-12285332 (+) // 97.72 // p15.3"]
["11748407_x_at",-0.14225197,0.0021591187,0.013396263,-0.10980797,0.04656887,-0.0021591187,0.9166241,0.77927905,-1.0142637,-0.02043286,1.0142637,"down","SCAF8",22828,"0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016363 // nuclear matrix // inferred from sequence or structural similarity /// 0016363 // nuclear matrix // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0043175 // RNA polymerase core enzyme binding // inferred from physical interaction /// 0070063 // RNA polymerase binding // inferred from electronic annotation","chr6:155054549-155155131 (+) // 98.89 // q25.2"]
["11759341_at",-0.061692,0.22015238,0.08888364,-0.102330446,0.061692,-0.10049963,0.5763445,0.2565226,1.09391,0.12949401,1.09391,"up","RGR",5995,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0007601 // visual perception // traceable author statement /// 0007602 // phototransduction // inferred from electronic annotation /// 0018298 // protein-chromophore linkage // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005887 // integral to plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0009881 // photoreceptor activity // inferred from electronic annotation","chr10:86004808-86019123 (+) // 51.19 // q23.1"]
["11733473_at",0.028832912,-0.07687998,-0.08162737,0.049685955,-0.028832912,0.081427574,0.49593726,0.18771954,-1.0550551,-0.0773184,1.0550551,"down","ANKRD24",170961,"","","","chr19:4186268-4224811 (+) // 91.23 // p13.3"]
["11744767_x_at",0.34128857,0.25237656,0.0739336,-0.089140415,-0.19855785,-0.0739336,0.15181383,0.017472653,1.268459,0.34307685,1.268459,"up","BCKDK",10295,"0000160 // two-component signal transduction system (phosphorelay) // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0009063 // cellular amino acid catabolic process // non-traceable author statement /// 0009083 // branched chain family amino acid catabolic process // inferred from sequence or structural similarity /// 0009083 // branched chain family amino acid catabolic process // traceable author statement /// 0009083 // branched chain family amino acid catabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from sequence or structural similarity /// 0016310 // phosphorylation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018106 // peptidyl-histidine phosphorylation // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation","0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0005947 // mitochondrial alpha-ketoglutarate dehydrogenase complex // inferred from sequence or structural similarity /// 0005947 // mitochondrial alpha-ketoglutarate dehydrogenase complex // traceable author statement /// 0005947 // mitochondrial alpha-ketoglutarate dehydrogenase complex // inferred from electronic annotation","0000155 // two-component sensor activity // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004673 // protein histidine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from sequence or structural similarity /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0016301 // kinase activity // inferred from electronic annotation /// 0016301 // kinase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0047323 // [3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring)] kinase activity // inferred from electronic annotation","chr16:31119751-31123887 (+) // 95.46 // p11.2"]
["11755677_a_at",0.17529249,0.016050339,-0.027685165,0.17330647,-0.058062077,-0.016050339,0.9386934,0.83069474,1.0150057,0.02148784,1.0150057,"up","ZNF257",113835,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:22235265-22272721 (+) // 99.51 // p12"]
["11726086_x_at",-0.04128933,0.045859337,0.040527344,-0.03563881,0.006699562,-0.006699562,0.7253025,0.43220073,1.0188291,0.026912082,1.0188291,"up","C12orf65",91574,"0006412 // translation // inferred from electronic annotation /// 0006415 // translational termination // inferred from electronic annotation","0005739 // mitochondrion // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation","0003747 // translation release factor activity // inferred from electronic annotation","chr12:123717463-123742272 (+) // 62.44 // q24.31"]
["11726124_at",0.33217,0.15372276,0.2627554,-0.3046732,-0.15372229,-0.17957687,0.06383687,0.0026948024,1.3776475,0.4622068,1.3776475,"up","TCN1",6947,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006824 // cobalt ion transport // inferred from electronic annotation /// 0009235 // cobalamin metabolic process // not recorded /// 0015889 // cobalamin transport // inferred from electronic annotation /// 0015889 // cobalamin transport // traceable author statement","0005576 // extracellular region // inferred from electronic annotation","0031419 // cobalamin binding // not recorded /// 0031419 // cobalamin binding // inferred from electronic annotation","chr11:59620274-59634048 (-) // 98.57 // q12.1"]
["11732208_at",-0.14801598,-0.025706768,0.025706768,0.14160061,0.07932234,-0.1746726,0.8228902,0.5863875,-1.0459076,-0.064755425,1.0459076,"down","MON2",23041,"0006810 // transport // inferred from electronic annotation /// 0006895 // Golgi to endosome transport // inferred from sequence or structural similarity /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // not recorded /// 0030036 // actin cytoskeleton organization // not recorded","0005802 // trans-Golgi network // not recorded","0005086 // ARF guanyl-nucleotide exchange factor activity // not recorded","chr12:62860586-62991448 (+) // 96.88 // q14.1"]
["11758506_s_at",0.06299782,-0.06299782,0.124424934,0.29547882,-0.17771053,-0.31864738,0.8329995,0.60556424,1.0780579,0.10843464,1.0780579,"up","RNF13",11342,"0016567 // protein ubiquitination // inferred from electronic annotation /// 0051865 // protein autoubiquitination // inferred from sequence or structural similarity /// 0051865 // protein autoubiquitination // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from sequence or structural similarity /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from sequence or structural similarity /// 0031902 // late endosome membrane // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from sequence or structural similarity /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:149679401-149679913 (+) // 97.35 // q25.1 /// chr7:83100201-83100717 (-) // 96.47 // q21.11"]
["11754353_x_at",0.14286184,-0.05256319,0.055146694,-0.12263727,0.05256319,-0.10945082,0.56550914,0.2461429,1.0779748,0.10832345,1.0779748,"up","RNF213",57674,"0006200 // ATP catabolic process // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0051865 // protein autoubiquitination // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:78360185-78370085 (+) // 92.69 // q25.3"]
["11719454_a_at",0.05100584,-0.04134512,0.04134512,-0.05446911,-0.14799166,0.05221653,0.67086625,0.35928932,1.0475967,0.06708341,1.0475967,"up","BBS1",582,"0001895 // retina homeostasis // inferred from mutant phenotype /// 0007601 // visual perception // inferred from electronic annotation /// 0035058 // nonmotile primary cilium assembly // inferred from mutant phenotype /// 0042384 // cilium assembly // inferred from mutant phenotype /// 0043001 // Golgi to plasma membrane protein transport // inferred from mutant phenotype /// 0045494 // photoreceptor cell maintenance // inferred from mutant phenotype /// 0050896 // response to stimulus // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0034464 // BBSome // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0060170 // cilium membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr11:66278079-66301069 (+) // 89.88 // q13.2"]
["11716621_a_at",0.020985603,0.10169506,0.107925415,-0.13634586,-0.042668343,-0.020985603,0.21039036,0.033525307,1.1046087,0.14353533,1.1046087,"up","TNPO1",3842,"0000060 // protein import into nucleus, translocation // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0008139 // nuclear localization sequence binding // traceable author statement /// 0008565 // protein transporter activity // inferred from electronic annotation","chr5:72112414-72210215 (+) // 90.72 // q13.2"]
["11751618_x_at",-0.04856491,-0.0012693405,0.0012693405,-0.30255413,0.012008667,0.07663345,0.8645076,0.66536176,1.0389425,0.05511575,1.0389425,"up","HLA-E",3133,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // inferred from electronic annotation /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002480 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0050776 // regulation of immune response // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0031901 // early endosome membrane // traceable author statement /// 0042612 // MHC class I protein complex // inferred from electronic annotation /// 0071556 // integral to lumenal side of endoplasmic reticulum membrane // traceable author statement","0032393 // MHC class I receptor activity // traceable author statement","chr6:30457288-30460679 (+) // 99.9 // p21.33"]
["11731722_a_at",0.41537476,-0.036826134,0.036826134,0.29249668,-0.1784029,-0.23174286,0.74474335,0.46012035,1.1310593,0.17767455,1.1310593,"up","ALDH3B1",221,"0006066 // alcohol metabolic process // traceable author statement /// 0006068 // ethanol catabolic process // inferred from electronic annotation /// 0006081 // cellular aldehyde metabolic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0034599 // cellular response to oxidative stress // inferred from direct assay /// 0046185 // aldehyde catabolic process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay","0004028 // 3-chloroallyl aldehyde dehydrogenase activity // traceable author statement /// 0004030 // aldehyde dehydrogenase [NAD(P)+] activity // inferred from direct assay /// 0004030 // aldehyde dehydrogenase [NAD(P)+] activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016620 // oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor // inferred from electronic annotation","chr11:67776016-67796741 (+) // 75.63 // q13.2"]
["11746595_a_at",0.02385807,0.10752773,0.17178345,-0.21215057,-0.02385807,-0.22755623,0.20168886,0.030892,1.1938139,0.25557798,1.1938139,"up","PCM1",5108,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000165 // MAPK cascade // inferred from electronic annotation /// 0000278 // mitotic cell cycle // traceable author statement /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0001755 // neural crest cell migration // inferred from electronic annotation /// 0001838 // embryonic epithelial tube formation // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007158 // neuron cell-cell adhesion // inferred from electronic annotation /// 0007158 // neuron cell-cell adhesion // inferred from mutant phenotype /// 0007165 // signal transduction // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007497 // posterior midgut development // traceable author statement /// 0010976 // positive regulation of neuron projection development // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0022027 // interkinetic nuclear migration // inferred from sequence or structural similarity /// 0022027 // interkinetic nuclear migration // inferred from electronic annotation /// 0030030 // cell projection organization // inferred from electronic annotation /// 0030155 // regulation of cell adhesion // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0033619 // membrane protein proteolysis // inferred from direct assay /// 0033630 // positive regulation of cell adhesion mediated by integrin // inferred from direct assay /// 0034453 // microtubule anchoring // inferred from sequence or structural similarity /// 0034453 // microtubule anchoring // inferred from electronic annotation /// 0034454 // microtubule anchoring at centrosome // inferred from electronic annotation /// 0035799 // ureter maturation // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from mutant phenotype /// 0042551 // neuron maturation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0048265 // response to pain // inferred from electronic annotation /// 0048265 // response to pain // inferred from sequence or structural similarity /// 0048484 // enteric nervous system development // inferred from electronic annotation /// 0050768 // negative regulation of neurogenesis // inferred from sequence or structural similarity /// 0050768 // negative regulation of neurogenesis // inferred from electronic annotation /// 0051297 // centrosome organization // inferred from mutant phenotype /// 0061146 // Peyer's patch morphogenesis // inferred from electronic annotation /// 0061146 // Peyer's patch morphogenesis // inferred from sequence or structural similarity /// 0071300 // cellular response to retinoic acid // inferred from mutant phenotype /// 0071539 // protein localization to centrosome // inferred from sequence or structural similarity /// 0071539 // protein localization to centrosome // inferred from electronic annotation /// 0072300 // positive regulation of metanephric glomerulus development // inferred from electronic annotation /// 0072300 // positive regulation of metanephric glomerulus development // inferred from sequence or structural similarity /// 0097021 // lymphocyte migration into lymphoid organs // inferred from sequence or structural similarity /// 0097150 // neuronal stem cell maintenance // inferred from electronic annotation /// 2001241 // positive regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from mutant phenotype /// 2001241 // positive regulation of extrinsic apoptotic signaling pathway in absence of ligand // traceable author statement","0000242 // pericentriolar material // inferred from sequence or structural similarity /// 0000242 // pericentriolar material // inferred from electronic annotation /// 0000242 // pericentriolar material // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005768 // endosome // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // inferred from sequence or structural similarity /// 0005813 // centrosome // inferred from electronic annotation /// 0005813 // centrosome // traceable author statement /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0010008 // endosome membrane // inferred from direct assay /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031513 // nonmotile primary cilium // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay /// 0034451 // centriolar satellite // inferred from direct assay /// 0034451 // centriolar satellite // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from sequence or structural similarity","chr8:17827083-17885371 (+) // 98.01 // p22"]
["11749459_a_at",-0.15830946,-0.2743101,0.15830946,-0.29761267,0.19249535,0.16930866,0.83636874,0.61205024,-1.0813502,-0.11283383,1.0813502,"down","RAP1GAP2",23108,"0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation","chr17:2699775-2939669 (+) // 97.6 // p13.3"]
["11750929_a_at",-0.02273655,0.022737026,0.14027548,-0.5499468,-0.034492493,0.03480053,0.6144435,0.29438505,1.1728119,0.2299716,1.1728119,"up","FRS2",10818,"0000186 // activation of MAPKK activity // traceable author statement /// 0000187 // activation of MAPK activity // inferred from electronic annotation /// 0001702 // gastrulation with mouth forming second // inferred from electronic annotation /// 0001759 // organ induction // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007185 // transmembrane receptor protein tyrosine phosphatase signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007405 // neuroblast proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from genetic interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0008595 // anterior/posterior axis specification, embryo // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0046619 // optic placode formation involved in camera-type eye formation // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050678 // regulation of epithelial cell proliferation // inferred from electronic annotation /// 0060527 // prostate epithelial cord arborization involved in prostate glandular acinus morphogenesis // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005068 // transmembrane receptor protein tyrosine kinase adaptor activity // traceable author statement /// 0005068 // transmembrane receptor protein tyrosine kinase adaptor activity // inferred from electronic annotation /// 0005104 // fibroblast growth factor receptor binding // inferred from physical interaction /// 0005158 // insulin receptor binding // inferred from electronic annotation /// 0005168 // neurotrophin TRKA receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0019211 // phosphatase activator activity // traceable author statement","chr12:69864185-69968744 (+) // 95.68 // q15"]
["11719932_x_at",0.06298208,-0.10099554,-0.0704155,0.26640224,-0.0019803047,0.0019798279,0.60812336,0.2881427,-1.0904651,-0.124943554,1.0904651,"down","KIAA0319L",79932,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0044433 // cytoplasmic vesicle part // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr1:35899090-36023037 (-) // 92.73 // p34.3"]
["11719136_at",0.1417408,0.07828045,0.044879913,-0.057097435,-0.044879913,-0.11005783,0.1174702,0.010215219,1.1164966,0.1589788,1.1164966,"up","THOC1",9984,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0032784 // regulation of transcription elongation, DNA-dependent // inferred from direct assay /// 0046784 // intronless viral mRNA export from host nucleus // inferred from direct assay /// 0051028 // mRNA transport // inferred from electronic annotation","0000346 // transcription export complex // inferred from direct assay /// 0000347 // THO complex // inferred from direct assay /// 0000445 // THO complex part of transcription export complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr18:214245-268059 (-) // 98.92 // p11.32"]
["11744110_at",0.011651993,0.02256012,-0.011651993,-0.04179287,-0.07508087,0.039683342,0.7041624,0.40259373,1.023315,0.033250242,1.023315,"up","TMEM101",84336,"0007165 // signal transduction // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from mutant phenotype","chr17:42088555-42092524 (-) // 88.18 // q21.31"]
["11735778_a_at",0.5281553,-0.16476536,-0.12705326,0.58553696,0.0008277893,-0.0008277893,0.88865453,0.7158414,-1.0840266,-0.11640012,1.0840266,"down","SYNE2",23224,"0006998 // nuclear envelope organization // inferred from electronic annotation /// 0007097 // nuclear migration // inferred from mutant phenotype /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0010761 // fibroblast migration // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from sequence or structural similarity /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031022 // nuclear migration along microfilament // inferred from sequence or structural similarity /// 0031022 // nuclear migration along microfilament // inferred from electronic annotation /// 0034504 // protein localization to nucleus // inferred from electronic annotation /// 0051642 // centrosome localization // inferred from mutant phenotype /// 0051642 // centrosome localization // inferred from electronic annotation /// 0090286 // cytoskeletal anchoring at nuclear membrane // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005640 // nuclear outer membrane // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016529 // sarcoplasmic reticulum // inferred from direct assay /// 0016529 // sarcoplasmic reticulum // inferred from electronic annotation /// 0030016 // myofibril // inferred from electronic annotation /// 0030018 // Z disc // inferred from direct assay /// 0030018 // Z disc // inferred from electronic annotation /// 0031258 // lamellipodium membrane // inferred from direct assay /// 0031527 // filopodium membrane // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay /// 0031981 // nuclear lumen // inferred from direct assay /// 0033017 // sarcoplasmic reticulum membrane // inferred from electronic annotation /// 0034993 // SUN-KASH complex // inferred from direct assay /// 0044429 // mitochondrial part // inferred from direct assay","0003779 // actin binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction","chr14:64319682-64693151 (+) // 99.51 // q23.2"]
["11757595_x_at",0.33249807,0.18743706,0.13698912,-0.1369896,-0.44598913,-0.24203968,0.117519945,0.010228125,1.4083256,0.49398085,1.4083256,"up","CRABP2",1382,"0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0008544 // epidermis development // traceable author statement /// 0035115 // embryonic forelimb morphogenesis // inferred from electronic annotation /// 0042573 // retinoic acid metabolic process // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation","0001972 // retinoic acid binding // inferred from electronic annotation /// 0005215 // transporter activity // inferred from electronic annotation /// 0005501 // retinoid binding // traceable author statement /// 0008289 // lipid binding // inferred from electronic annotation /// 0016918 // retinal binding // inferred from electronic annotation /// 0019841 // retinol binding // inferred from electronic annotation","chr1:156669401-156670710 (-) // 90.51 // q23.1"]
["11746365_a_at",-0.06148672,0.31803274,0.42534876,0.004902363,-0.004902363,-0.08777857,0.4639584,0.16361605,1.194625,0.25655785,1.194625,"up","EPB41",2035,"0008015 // blood circulation // traceable author statement /// 0030036 // actin cytoskeleton organization // non-traceable author statement /// 0030866 // cortical actin cytoskeleton organization // inferred from electronic annotation /// 0032092 // positive regulation of protein binding // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005938 // cell cortex // inferred from electronic annotation /// 0008091 // spectrin // traceable author statement /// 0014731 // spectrin-associated cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0019898 // extrinsic to membrane // inferred from electronic annotation /// 0030863 // cortical cytoskeleton // inferred from direct assay /// 0030863 // cortical cytoskeleton // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay","0003779 // actin binding // inferred from electronic annotation /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005545 // 1-phosphatidylinositol binding // inferred from direct assay /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation /// 0030507 // spectrin binding // traceable author statement","chr1:29241085-29442316 (+) // 91.94 // p35.3"]
["11735362_s_at",0.0037965775,-0.016086578,0.10745621,-0.04109049,-0.0037961006,0.1733551,0.9617605,0.8915535,-1.0077242,-0.011100799,1.0077242,"down","AKTIP /// LOC100130746","100130746 /// 64400","0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007032 // endosome organization // inferred from mutant phenotype /// 0007040 // lysosome organization // inferred from mutant phenotype /// 0008333 // endosome to lysosome transport // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0032092 // positive regulation of protein binding // inferred from direct assay /// 0045022 // early endosome to late endosome transport // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030897 // HOPS complex // inferred from direct assay /// 0070695 // FHF complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0019787 // small conjugating protein ligase activity // non-traceable author statement","chr16:53525191-53537170 (-) // 98.97 // q12.2"]
["11726670_a_at",0.022892952,0.015036106,-0.015036106,-0.20440054,-0.18791962,0.044859886,0.51614344,0.20354146,1.0893376,0.12345111,1.0893376,"up","DCLRE1B",64858,"0000075 // cell cycle checkpoint // inferred from mutant phenotype /// 0000723 // telomere maintenance // inferred from mutant phenotype /// 0006281 // DNA repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0031627 // telomeric loop formation // inferred from sequence or structural similarity /// 0031627 // telomeric loop formation // inferred from electronic annotation /// 0031848 // protection from non-homologous end joining at telomere // inferred from mutant phenotype /// 0031848 // protection from non-homologous end joining at telomere // inferred from electronic annotation /// 0031860 // telomeric 3' overhang formation // inferred from sequence or structural similarity /// 0031860 // telomeric 3' overhang formation // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0000781 // chromosome, telomeric region // inferred from direct assay /// 0000781 // chromosome, telomeric region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0004518 // nuclease activity // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008409 // 5'-3' exonuclease activity // inferred from direct assay /// 0008409 // 5'-3' exonuclease activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr1:114447767-114456708 (+) // 86.37 // p13.2"]
["11733623_at",-0.00735569,0.24572134,0.0030021667,-0.020096064,-0.0030024052,0.22950554,0.9734147,0.9244242,1.0081104,0.011653645,1.0081104,"up","ZNF831",128611,"","0005622 // intracellular // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:57766074-57834168 (+) // 97.27 // q13.32"]
["11758603_s_at",0.039096832,-0.039096832,0.068650246,0.05446863,-0.091402054,-0.42215443,0.6108087,0.29069275,1.1296788,0.1759127,1.1296788,"up","PANK3",79646,"0015937 // coenzyme A biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004594 // pantothenate kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr5:167983954-167984338 (-) // 100.0 // q34"]
["11723538_x_at",-0.22285748,-0.0089178085,0.036234856,-0.03622055,0.0089178085,0.034539223,0.7438573,0.4588366,-1.0479662,-0.06759224,1.0479662,"down","C16orf88",400506,"","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation","","chr16:19717673-19726705 (-) // 74.35 // p12.3"]
["11750062_a_at",0.08244133,-0.096040726,-0.13933372,0.07181263,0.03691864,-0.03691864,0.6830291,0.37471753,-1.0532992,-0.07491529,1.0532992,"down","UBXN1",51035,"0031397 // negative regulation of protein ubiquitination // inferred from direct assay /// 0032435 // negative regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // non-traceable author statement","0000502 // proteasome complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0034098 // Cdc48p-Npl4p-Ufd1p AAA ATPase complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0031593 // polyubiquitin binding // inferred from direct assay /// 0031625 // ubiquitin protein ligase binding // inferred from direct assay /// 0043130 // ubiquitin binding // inferred from direct assay /// 0051117 // ATPase binding // inferred from physical interaction /// 0071796 // K6-linked polyubiquitin binding // inferred from direct assay","chr11:62445389-62446567 (-) // 100.0 // q12.3"]
["11718534_at",0.11730385,-0.0070848465,0.0070848465,0.23165894,-0.10314655,-0.11197376,0.9226667,0.7929955,1.0235548,0.033588346,1.0235548,"up","NKTR",4820,"0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006457 // protein folding // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation","0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0016018 // cyclosporin A binding // traceable author statement /// 0016853 // isomerase activity // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation","chr3:42642105-42690225 (+) // 92.45 // p22.1"]
["11748153_a_at",0.1795063,-0.050685883,-0.004149437,-0.06408739,0.1363883,0.004149437,0.9536414,0.8693109,1.0112036,0.016073572,1.0112036,"up","PTCD2",79810,"0001822 // kidney development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0007005 // mitochondrion organization // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0048747 // muscle fiber development // inferred from electronic annotation /// 0050684 // regulation of mRNA processing // inferred from electronic annotation /// 0055010 // ventricular cardiac muscle tissue morphogenesis // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation","","chr5:71616193-71654055 (+) // 99.78 // q13.2"]
["11746538_s_at",-0.1687274,0.2749176,-0.018940926,-0.07456064,0.018940926,0.09276676,0.9677416,0.910161,1.0116433,0.01670068,1.0116433,"up","FAM75C1 /// FAM75C2","441452 /// 645961","","","","chr9:90532876-90538571 (+) // 98.73 // q22.1 /// chr9:90744220-90753390 (-) // 99.71 // q22.1"]
["11758949_at",-0.013145447,-0.21174097,-0.038241386,0.1467452,0.27011967,0.013145924,0.3158857,0.07578187,-1.1736858,-0.23104623,1.1736858,"down","ASXL2",55252,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0035360 // positive regulation of peroxisome proliferator activated receptor signaling pathway // inferred from direct assay /// 0045600 // positive regulation of fat cell differentiation // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation","0042975 // peroxisome proliferator activated receptor binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:25960346-26101385 (-) // 97.95 // p23.3"]
["11740229_at",-0.10850239,-0.21571207,0.10850239,-0.15122032,0.12402582,0.22976351,0.7026897,0.4003176,-1.1014676,-0.13942707,1.1014676,"down","GSDMA",284110,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","","chr17:38119225-38134110 (+) // 85.81 // q21.1"]
["11744961_a_at",0.026632309,-0.017239094,-0.07332897,0.13940191,-0.03144884,0.017239094,0.6571992,0.34165832,-1.0446666,-0.063042656,1.0446666,"down","IQCE",23288,"","0005739 // mitochondrion // inferred from electronic annotation","","chr7:2598690-2649915 (+) // 95.73 // p22.3"]
["11744504_x_at",0.12971687,-0.023770332,0.0041913986,0.13275242,-0.0041913986,-0.17831135,0.8454055,0.62772095,1.0376328,0.053296022,1.0376328,"up","POLR2J",5439,"0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006370 // 7-methylguanosine mRNA capping // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0050434 // positive regulation of viral transcription // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005665 // DNA-directed RNA polymerase II, core complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0030275 // LRR domain binding // inferred from physical interaction","chr7:102113562-102119357 (-) // 92.32 // q22.1"]
["11750330_a_at",-0.116770744,0.08946991,-0.067008495,-0.19406271,0.12175751,0.067008495,0.929645,0.8100399,-1.0207793,-0.02967091,1.0207793,"down","MYOCD",93649,"0001560 // regulation of cell growth by extracellular stimulus // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0003231 // cardiac ventricle development // inferred from electronic annotation /// 0003257 // positive regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0010667 // negative regulation of cardiac muscle cell apoptotic process // inferred from electronic annotation /// 0010832 // negative regulation of myotube differentiation // inferred from electronic annotation /// 0030511 // positive regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0035051 // cardiac cell differentiation // non-traceable author statement /// 0035065 // regulation of histone acetylation // inferred from sequence or structural similarity /// 0035065 // regulation of histone acetylation // inferred from electronic annotation /// 0042692 // muscle cell differentiation // inferred from electronic annotation /// 0043388 // positive regulation of DNA binding // inferred from electronic annotation /// 0045661 // regulation of myoblast differentiation // inferred from electronic annotation /// 0045736 // negative regulation of cyclin-dependent protein kinase activity // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0045987 // positive regulation of smooth muscle contraction // inferred from direct assay /// 0048286 // lung alveolus development // inferred from electronic annotation /// 0048565 // digestive tract development // inferred from electronic annotation /// 0051145 // smooth muscle cell differentiation // inferred from mutant phenotype /// 0051145 // smooth muscle cell differentiation // inferred from electronic annotation /// 0051150 // regulation of smooth muscle cell differentiation // traceable author statement /// 0051150 // regulation of smooth muscle cell differentiation // inferred from electronic annotation /// 0051152 // positive regulation of smooth muscle cell differentiation // inferred from direct assay /// 0055007 // cardiac muscle cell differentiation // inferred from sequence or structural similarity /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0055012 // ventricular cardiac muscle cell differentiation // inferred from electronic annotation /// 0060065 // uterus development // inferred from electronic annotation /// 0060157 // urinary bladder development // inferred from electronic annotation /// 0071956 // cellular component maintenance at cellular level // inferred from electronic annotation /// 0097070 // ductus arteriosus closure // inferred from electronic annotation /// 2000721 // positive regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation // inferred from direct assay /// 2000724 // positive regulation of cardiac vascular smooth muscle cell differentiation // inferred from sequence or structural similarity /// 2000727 // positive regulation of cardiac muscle cell differentiation // inferred from direct assay /// 2001015 // negative regulation of skeletal muscle cell differentiation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0001046 // core promoter sequence-specific DNA binding // inferred from direct assay /// 0001076 // RNA polymerase II transcription factor binding transcription factor activity // inferred from sequence or structural similarity /// 0001076 // RNA polymerase II transcription factor binding transcription factor activity // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from direct assay /// 0035035 // histone acetyltransferase binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from electronic annotation /// 0070412 // R-SMAD binding // inferred from electronic annotation","chr17:12569213-12667275 (+) // 99.36 // p12"]
["11718807_at",0.20556498,-0.049929142,-0.07342148,0.049929142,0.06818533,-0.1384883,0.9148108,0.77361554,1.0239861,0.034196135,1.0239861,"up","TNFRSF1B",7133,"0006915 // apoptotic process // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0033209 // tumor necrosis factor-mediated signaling pathway // traceable author statement /// 0033209 // tumor necrosis factor-mediated signaling pathway // inferred from electronic annotation /// 0050728 // negative regulation of inflammatory response // inferred from electronic annotation /// 0050779 // RNA destabilization // inferred from electronic annotation /// 0051044 // positive regulation of membrane protein ectodomain proteolysis // inferred from mutant phenotype /// 0071222 // cellular response to lipopolysaccharide // inferred from mutant phenotype","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay /// 0045121 // membrane raft // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005031 // tumor necrosis factor-activated receptor activity // inferred from electronic annotation /// 0005031 // tumor necrosis factor-activated receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr1:12227041-12269279 (+) // 84.71 // p36.22"]
["11742610_at",-0.28437114,-0.0404706,-0.045236588,0.0404706,0.11955404,0.2317009,0.2818213,0.060237583,-1.1924548,-0.2539346,1.1924548,"down","OR6C3",254786,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // non-traceable author statement /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // non-traceable author statement /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // non-traceable author statement /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr12:55725484-55726420 (+) // 100.0 // q13.2"]
["11737152_at",-0.13077259,0.18934846,0.07833552,-0.28596354,-0.025637865,0.025637627,0.66670424,0.35403845,1.1026374,0.14095846,1.1026374,"up","C4orf51",646603,"","","","chr4:146601355-146653949 (+) // 100.0 // q31.21"]
["11720525_a_at",-0.03030634,0.18814182,0.09110117,-0.1128664,-0.010486126,0.010486126,0.4827071,0.1775252,1.0871876,0.12060097,1.0871876,"up","HPS4",89781,"0006605 // protein targeting // inferred from direct assay /// 0006996 // organelle organization // inferred from electronic annotation /// 0007040 // lysosome organization // inferred from direct assay /// 0007596 // blood coagulation // inferred from electronic annotation /// 0007599 // hemostasis // traceable author statement /// 0030318 // melanocyte differentiation // inferred from electronic annotation /// 0048075 // positive regulation of eye pigmentation // traceable author statement /// 0050821 // protein stabilization // inferred from physical interaction","0005624 // membrane fraction // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from direct assay /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0042470 // melanosome // inferred from direct assay /// 0042827 // platelet dense granule // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046983 // protein dimerization activity // inferred from physical interaction","chr22:26847445-26879820 (-) // 98.99 // q12.1"]
["11746259_a_at",0.32432604,0.17826986,0.17676544,-0.31329012,-0.50558233,-0.17676544,0.094827026,0.0064785527,1.4725667,0.558333,1.4725667,"up","PIGA",5277,"0006501 // C-terminal protein lipidation // traceable author statement /// 0006506 // GPI anchor biosynthetic process // traceable author statement /// 0006506 // GPI anchor biosynthetic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009893 // positive regulation of metabolic process // traceable author statement /// 0016254 // preassembly of GPI anchor in ER membrane // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0000506 // glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008194 // UDP-glycosyltransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0017176 // phosphatidylinositol N-acetylglucosaminyltransferase activity // traceable author statement /// 0017176 // phosphatidylinositol N-acetylglucosaminyltransferase activity // inferred from electronic annotation","chrX:15337579-15350115 (-) // 96.49 // p22.2"]
["11720089_a_at",-0.09694958,0.14456844,0.021848202,-0.21794748,0.05111313,-0.021848679,0.74712425,0.46391734,1.06146,0.086050026,1.06146,"up","NRSN2",80023,"","0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from sequence or structural similarity /// 0030133 // transport vesicle // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","","chr20:327369-335507 (+) // 75.7 // p13"]
["11720443_s_at",0.032084465,-0.032084465,0.0663929,0.105630875,-0.045991898,-0.102832794,0.8425004,0.622517,1.0256432,0.036528975,1.0256432,"up","BAZ1A",11177,"0006261 // DNA-dependent DNA replication // inferred from direct assay /// 0006338 // chromatin remodeling // traceable author statement /// 0006351 // transcription, DNA-dependent // non-traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0000228 // nuclear chromosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0008623 // chromatin accessibility complex // inferred from direct assay /// 0016590 // ACF complex // traceable author statement","0004402 // histone acetyltransferase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:35221936-35344853 (-) // 94.21 // q13.1"]
["11747540_a_at",0.21860409,0.030899048,-0.030899048,0.14455414,-0.1452694,-0.06326294,0.7421172,0.456235,1.0674689,0.09419401,1.0674689,"up","ADAM9",8754,"0000186 // activation of MAPKK activity // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0006509 // membrane protein ectodomain proteolysis // inferred from direct assay /// 0006509 // membrane protein ectodomain proteolysis // inferred from mutant phenotype /// 0007155 // cell adhesion // inferred from mutant phenotype /// 0007160 // cell-matrix adhesion // inferred from mutant phenotype /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from mutant phenotype /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from sequence or structural similarity /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred by curator /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0010042 // response to manganese ion // inferred from mutant phenotype /// 0030216 // keratinocyte differentiation // inferred from expression pattern /// 0033627 // cell adhesion mediated by integrin // inferred from mutant phenotype /// 0033630 // positive regulation of cell adhesion mediated by integrin // inferred from mutant phenotype /// 0033631 // cell-cell adhesion mediated by integrin // inferred from expression pattern /// 0034241 // positive regulation of macrophage fusion // inferred from mutant phenotype /// 0034612 // response to tumor necrosis factor // inferred from direct assay /// 0042117 // monocyte activation // inferred from mutant phenotype /// 0042542 // response to hydrogen peroxide // inferred from mutant phenotype /// 0050714 // positive regulation of protein secretion // inferred from direct assay /// 0051044 // positive regulation of membrane protein ectodomain proteolysis // inferred from sequence or structural similarity /// 0051044 // positive regulation of membrane protein ectodomain proteolysis // inferred from electronic annotation /// 0051088 // PMA-inducible membrane protein ectodomain proteolysis // inferred from direct assay /// 0051088 // PMA-inducible membrane protein ectodomain proteolysis // traceable author statement /// 0051384 // response to glucocorticoid stimulus // inferred from sequence or structural similarity /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051549 // positive regulation of keratinocyte migration // inferred from mutant phenotype /// 0051592 // response to calcium ion // inferred from mutant phenotype /// 0071222 // cellular response to lipopolysaccharide // inferred from mutant phenotype","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from sequence or structural similarity /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from sequence or structural similarity /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031233 // intrinsic to external side of plasma membrane // inferred from sequence or structural similarity /// 0031233 // intrinsic to external side of plasma membrane // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from direct assay /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // inferred from mutant phenotype /// 0005080 // protein kinase C binding // inferred from sequence or structural similarity /// 0005080 // protein kinase C binding // inferred from electronic annotation /// 0005178 // integrin binding // inferred by curator /// 0005178 // integrin binding // inferred from direct assay /// 0005178 // integrin binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from mutant phenotype /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from mutant phenotype /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from sequence or structural similarity /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0043236 // laminin binding // inferred from mutant phenotype /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:38913160-38961311 (+) // 99.27 // p11.22"]
["11762478_at",0.28357124,-0.12065673,0.053171396,-0.21610165,-0.053171635,0.06809759,0.69167805,0.38618234,1.1012082,0.13908727,1.1012082,"up","AGXT",189,"0006625 // protein targeting to peroxisome // inferred from mutant phenotype /// 0008152 // metabolic process // inferred from electronic annotation /// 0009436 // glyoxylate catabolic process // inferred from direct assay /// 0019265 // glycine biosynthetic process, by transamination of glyoxylate // inferred from direct assay /// 0019265 // glycine biosynthetic process, by transamination of glyoxylate // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042853 // L-alanine catabolic process // inferred from direct assay /// 0042866 // pyruvate biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046487 // glyoxylate metabolic process // inferred from mutant phenotype /// 0046487 // glyoxylate metabolic process // traceable author statement /// 0046487 // glyoxylate metabolic process // inferred from electronic annotation /// 0046724 // oxalic acid secretion // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation /// 0005782 // peroxisomal matrix // inferred from direct assay /// 0005782 // peroxisomal matrix // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004760 // serine-pyruvate transaminase activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008453 // alanine-glyoxylate transaminase activity // inferred from direct assay /// 0008453 // alanine-glyoxylate transaminase activity // traceable author statement /// 0008453 // alanine-glyoxylate transaminase activity // inferred from electronic annotation /// 0008483 // transaminase activity // inferred from direct assay /// 0008483 // transaminase activity // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from direct assay /// 0030170 // pyridoxal phosphate binding // inferred from mutant phenotype /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay","chr2:241816329-241819330 (+) // 58.66 // q37.3"]
["11759995_at",-0.39997292,0.15344906,-0.15344906,-0.1856637,0.27217007,0.16922331,0.6716101,0.36038113,-1.1635777,-0.21856752,1.1635777,"down","TP53BP1",7158,"0000724 // double-strand break repair via homologous recombination // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006302 // double-strand break repair // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred by curator","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0000781 // chromosome, telomeric region // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from direct assay /// 0005657 // replication fork // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay","0001102 // RNA polymerase II activating transcription factor binding // inferred from physical interaction /// 0001104 // RNA polymerase II transcription cofactor activity // inferred from mutant phenotype /// 0002039 // p53 binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042162 // telomeric DNA binding // inferred from electronic annotation","chr15:43707419-43785354 (-) // 96.23 // q15.3"]
["11734750_a_at",0.15235853,-0.08309841,0.04697275,0.0034046173,-0.0034046173,-0.13888884,0.6714371,0.3601846,1.0607176,0.085040584,1.0607176,"up","LIN52",91750,"0000278 // mitotic cell cycle // traceable author statement","0005654 // nucleoplasm // traceable author statement","","chr14:74551498-74667117 (+) // 84.77 // q24.3"]
["11723954_s_at",-0.10077858,-0.15188599,-0.16553211,0.1368103,0.2343216,0.10077858,0.06318636,0.0026274882,-1.2283336,-0.2967024,1.2283336,"down","CLINT1",9685,"0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0030276 // clathrin binding // inferred from physical interaction","chr5:157213296-157286183 (-) // 97.83 // q33.3"]
["11760231_x_at",-0.03708458,-0.094441414,-0.016895771,0.029920101,0.016895771,0.080668926,0.22462785,0.038570672,-1.0658237,-0.09196878,1.0658237,"down","TDGF1P3",6998,"0000187 // activation of MAPK activity // inferred from direct assay /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001763 // morphogenesis of a branching structure // traceable author statement /// 0001954 // positive regulation of cell-matrix adhesion // inferred from electronic annotation /// 0002042 // cell migration involved in sprouting angiogenesis // inferred from mutant phenotype /// 0007165 // signal transduction // inferred from direct assay /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from direct assay /// 0007369 // gastrulation // inferred from electronic annotation /// 0007500 // mesodermal cell fate determination // non-traceable author statement /// 0007507 // heart development // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0008595 // anterior/posterior axis specification, embryo // inferred from electronic annotation /// 0008595 // anterior/posterior axis specification, embryo // inferred from sequence or structural similarity /// 0009790 // embryo development // traceable author statement /// 0009948 // anterior/posterior axis specification // inferred from electronic annotation /// 0009966 // regulation of signal transduction // inferred from electronic annotation /// 0009966 // regulation of signal transduction // inferred from direct assay /// 0010595 // positive regulation of endothelial cell migration // inferred from direct assay /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0030154 // cell differentiation // traceable author statement /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030509 // BMP signaling pathway // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0030879 // mammary gland development // traceable author statement /// 0035729 // cellular response to hepatocyte growth factor stimulus // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from direct assay /// 0048146 // positive regulation of fibroblast proliferation // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0060070 // canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0071346 // cellular response to interferon-gamma // inferred from direct assay /// 0071354 // cellular response to interleukin-6 // inferred from direct assay /// 0071356 // cellular response to tumor necrosis factor // inferred from direct assay /// 0071364 // cellular response to epidermal growth factor stimulus // inferred from direct assay","0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009279 // cell outer membrane // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from direct assay /// 0019897 // extrinsic to plasma membrane // inferred from electronic annotation /// 0019897 // extrinsic to plasma membrane // inferred from sequence or structural similarity /// 0031225 // anchored to membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005102 // receptor binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // non-traceable author statement /// 0008083 // growth factor activity // inferred from direct assay /// 0008083 // growth factor activity // inferred from electronic annotation","chrX:109763539-109766249 (+) // 87.51 // q23"]
["11735161_s_at",-0.044171333,0.1489048,-0.027041435,-0.28569126,0.027041912,0.14458752,0.8705923,0.67689234,1.0453006,0.06391788,1.0453006,"up","DLX4",1748,"0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0000976 // transcription regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr17:48046587-48052322 (+) // 96.97 // q21.33"]
["11760640_at",-0.23435163,0.12933397,-0.028101444,-0.24367476,0.028101444,0.30477,0.88913023,0.7165972,-1.0527079,-0.074105196,1.0527079,"down","KCNQ2",3785,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // traceable author statement /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0071805 // potassium ion transmembrane transport // traceable author statement /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // traceable author statement /// 0008076 // voltage-gated potassium channel complex // inferred from electronic annotation /// 0008076 // voltage-gated potassium channel complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0033268 // node of Ranvier // inferred from sequence or structural similarity /// 0043194 // initial segment // inferred from sequence or structural similarity","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005249 // voltage-gated potassium channel activity // inferred from electronic annotation /// 0005249 // voltage-gated potassium channel activity // traceable author statement /// 0005267 // potassium channel activity // traceable author statement /// 0005267 // potassium channel activity // inferred from electronic annotation /// 0030506 // ankyrin binding // inferred from physical interaction","chr20:62068414-62071639 (-) // 67.8 // q13.33"]
["11748027_x_at",-0.0113554,-0.010378361,-0.2807703,0.32019567,0.010378361,0.025381088,0.48525116,0.17971829,-1.164319,-0.21948643,1.164319,"down","MBD3",53615,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006346 // methylation-dependent chromatin silencing // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0009888 // tissue development // inferred from electronic annotation /// 0016573 // histone acetylation // inferred from electronic annotation","0000785 // chromatin // inferred from electronic annotation /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016581 // NuRD complex // non-traceable author statement /// 0016581 // NuRD complex // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003682 // chromatin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr19:1576677-1592760 (-) // 91.44 // p13.3"]
["11722658_at",0.029279232,0.016166687,-0.14294481,-0.07364464,-0.016167164,0.14175797,0.8246158,0.5889551,-1.0351322,-0.049814988,1.0351322,"down","CXCL17",284340,"0001525 // angiogenesis // inferred from electronic annotation /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","","chr19:42932429-42947200 (-) // 98.5 // q13.2"]
["11748533_x_at",0.02754879,0.04372692,0.013127327,-0.013127327,-0.1520977,-0.052235603,0.31642526,0.076133706,1.0722351,0.100621276,1.0722351,"up","IST1",9798,"0007049 // cell cycle // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr16:71929433-71962242 (+) // 96.4 // q22.2"]
["11755572_x_at",0.53234386,0.030142784,-0.030142784,0.22226238,-0.22282505,-0.170434,0.6712666,0.35999298,1.1764556,0.2344469,1.1764556,"up","MAP7D1",55700,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","","chr1:36643512-36646441 (+) // 93.42 // p34.3"]
["11759255_at",-0.25703907,0.20811725,0.14777803,0.086325884,-0.12264228,-0.086325884,0.8656406,0.6677498,1.0525092,0.073832825,1.0525092,"up","PCDHGB5",56101,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr5:140767264-140780223 (+) // 100.0 // q31.3"]
["11749019_a_at",0.08038378,0.053358555,0.039716244,-0.039716244,-0.10216522,-0.13763666,0.10632279,0.008231164,1.1103328,0.15099221,1.1103328,"up","MYNN",55892,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:169491173-169504524 (+) // 99.8 // q26.2"]
["11738071_at",0.24202347,-0.1305747,-0.16718602,0.13057494,-0.19789052,0.21830797,0.89292055,0.7242476,-1.0489239,-0.06890994,1.0489239,"down","ZNF519",162655,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr18:14103863-14132429 (-) // 99.51 // p11.21"]
["11736862_at",-0.31125808,-0.14033318,0.09730816,-0.063970566,0.07217932,0.063970566,0.64108557,0.32366583,-1.1035516,-0.14215413,1.1035516,"down","CXorf41",139212,"","","","chrX:106449905-106487472 (+) // 86.23 // q22.3"]
["11727755_a_at",-0.022975445,-0.082800865,0.022974968,0.10051823,-0.089565754,0.14761734,0.67534053,0.36442003,-1.057353,-0.08045713,1.057353,"down","ZNF653",115950,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:11594241-11616821 (-) // 94.11 // p13.2"]
["11759050_at",-0.15653896,0.017924786,0.042660713,-0.090183735,-0.017924786,0.18161678,0.83592564,0.61138487,-1.0399306,-0.05648723,1.0399306,"down","DAB1",1600,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","","","chr1:57460452-58716211 (-) // 98.29 // p32.2"]
["11732748_at",-0.20936966,0.09399414,0.29353952,-0.13474226,-0.09399414,0.17879534,0.8759238,0.68840617,1.054117,0.076034956,1.054117,"up","DNAH6",1768,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0007018 // microtubule-based movement // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0030286 // dynein complex // inferred from electronic annotation /// 0035085 // cilium axoneme // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // non-traceable author statement /// 0003777 // microtubule motor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr2:84743578-85046713 (+) // 99.08 // p11.2"]
["11740634_a_at",-0.06700897,0.067008734,0.17137766,-0.115876436,-0.07390714,0.07653761,0.6661631,0.35317487,1.0679724,0.09487439,1.0679724,"up","FOXP2",93986,"0002053 // positive regulation of mesenchymal cell proliferation // not recorded /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007389 // pattern specification process // not recorded /// 0007519 // skeletal muscle tissue development // not recorded /// 0009790 // embryo development // not recorded /// 0009791 // post-embryonic development // not recorded /// 0021549 // cerebellum development // not recorded /// 0021757 // caudate nucleus development // inferred from mutant phenotype /// 0021758 // putamen development // inferred from mutant phenotype /// 0021987 // cerebral cortex development // inferred from expression pattern /// 0040007 // growth // not recorded /// 0042297 // vocal learning // not recorded /// 0043010 // camera-type eye development // not recorded /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0048286 // lung alveolus development // not recorded /// 0048745 // smooth muscle tissue development // not recorded /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // not recorded /// 0060013 // righting reflex // not recorded /// 0060501 // positive regulation of epithelial cell proliferation involved in lung morphogenesis // not recorded","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // not recorded /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // not recorded","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // not recorded /// 0003690 // double-stranded DNA binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // not recorded /// 0008134 // transcription factor binding // not recorded /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008301 // DNA binding, bending // not recorded /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // not recorded","chr7:114055051-114331100 (+) // 94.92 // q31.1"]
["11730798_a_at",-0.017046452,-0.036026,0.022384644,0.017046452,0.1252613,-0.025810242,0.67621773,0.3656679,-1.0345919,-0.04906182,1.0345919,"down","FAM114A2",10827,"","","0017076 // purine nucleotide binding // non-traceable author statement","chr5:153371270-153418498 (-) // 99.69 // q33.2"]
["11762387_x_at",0.01914668,-0.0203681,0.0069391727,-0.197783,-0.0069391727,0.1860137,0.98092824,0.94524795,1.0056596,0.00814203,1.0056596,"up","MYO3B",140469,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016459 // myosin complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr2:171034654-171376480 (+) // 92.93 // q31.1"]
["11715297_at",0.0041127205,-0.09120178,-0.0041127205,-0.07424307,0.007568836,0.10713148,0.777647,0.509448,-1.0308871,-0.04388638,1.0308871,"down","FXN",2395,"0006119 // oxidative phosphorylation // inferred from electronic annotation /// 0006783 // heme biosynthetic process // non-traceable author statement /// 0006783 // heme biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // inferred from mutant phenotype /// 0006879 // cellular iron ion homeostasis // inferred from electronic annotation /// 0007005 // mitochondrion organization // inferred from electronic annotation /// 0007628 // adult walking behavior // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0009060 // aerobic respiration // inferred from electronic annotation /// 0009792 // embryo development ending in birth or egg hatching // inferred from electronic annotation /// 0010039 // response to iron ion // inferred from mutant phenotype /// 0010722 // regulation of ferrochelatase activity // inferred from direct assay /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016226 // iron-sulfur cluster assembly // inferred from electronic annotation /// 0016540 // protein autoprocessing // inferred from direct assay /// 0018283 // iron incorporation into metallo-sulfur cluster // inferred from direct assay /// 0019230 // proprioception // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from mutant phenotype /// 0040015 // negative regulation of multicellular organism growth // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0045773 // positive regulation of axon extension // inferred from electronic annotation /// 0046621 // negative regulation of organ growth // inferred from electronic annotation /// 0048554 // positive regulation of metalloenzyme activity // inferred from mutant phenotype /// 0051347 // positive regulation of transferase activity // inferred from mutant phenotype /// 0051349 // positive regulation of lyase activity // inferred from direct assay /// 0051349 // positive regulation of lyase activity // inferred from mutant phenotype /// 0051353 // positive regulation of oxidoreductase activity // inferred from mutant phenotype /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070301 // cellular response to hydrogen peroxide // inferred from direct assay /// 0090201 // negative regulation of release of cytochrome c from mitochondria // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from sequence or structural similarity /// 0005759 // mitochondrial matrix // non-traceable author statement /// 0005829 // cytosol // inferred from direct assay","0004322 // ferroxidase activity // inferred from direct assay /// 0004322 // ferroxidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008198 // ferrous iron binding // inferred from direct assay /// 0008199 // ferric iron binding // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0034986 // iron chaperone activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from direct assay /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from direct assay","chr9:71650478-71715094 (+) // 94.59 // q21.11"]
["11730111_a_at",-0.025079727,0.06100464,0.099645615,-0.040499687,0.025079727,-0.39382744,0.57003564,0.25037944,1.1341457,0.18160604,1.1341457,"up","DEPDC1",55635,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from direct assay","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:68939834-68962799 (-) // 78.37 // p31.2"]
["11727691_a_at",-0.35884237,0.06868982,-0.04848051,-0.4027319,0.04848051,0.08650732,0.9687706,0.91267824,-1.0165137,-0.023629665,1.0165137,"down","IL11",3589,"0007267 // cell-cell signaling // inferred by curator /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0030168 // platelet activation // non-traceable author statement /// 0030183 // B cell differentiation // non-traceable author statement /// 0030219 // megakaryocyte differentiation // non-traceable author statement /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0043410 // positive regulation of MAPK cascade // inferred from direct assay /// 0045444 // fat cell differentiation // non-traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0046888 // negative regulation of hormone secretion // inferred from direct assay /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay","0005576 // extracellular region // inferred by curator /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0005142 // interleukin-11 receptor binding // non-traceable author statement /// 0005142 // interleukin-11 receptor binding // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from direct assay /// 0008083 // growth factor activity // inferred from electronic annotation","chr19:55875757-55881834 (-) // 61.82 // q13.42"]
["11737317_at",-0.014332294,0.2218895,0.005452156,-0.24986553,-0.005452156,0.22788715,0.85028553,0.63724816,1.0571254,0.08014659,1.0571254,"up","C1orf95",375057,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:226736500-226793554 (+) // 88.44 // q42.12"]
["11722880_a_at",0.1740284,0.015316963,-0.015316963,0.05652523,-0.16487312,-0.19865131,0.4877694,0.18144093,1.1175524,0.16034247,1.1175524,"up","PHF19",26147,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:123631852-123639606 (-) // 73.08 // q33.2"]
["11754381_a_at",0.07140684,0.03596115,-0.032974243,-0.27955675,-0.14138699,0.032974243,0.48817787,0.18176515,1.1127435,0.15412107,1.1127435,"up","TMOD1",7111,"0030049 // muscle filament sliding // traceable author statement /// 0030239 // myofibril assembly // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0008180 // signalosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030016 // myofibril // inferred from electronic annotation /// 0030863 // cortical cytoskeleton // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005523 // tropomyosin binding // inferred from electronic annotation","chr9:100360658-100364028 (+) // 91.78 // q22.33"]
["11741447_s_at",0.36261654,-0.15704584,-0.119038105,0.24401474,0.001229763,-0.0012302399,0.9222587,0.79174775,-1.0370561,-0.052493922,1.0370561,"down","RNASE4",6038,"0006379 // mRNA cleavage // non-traceable author statement /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0004522 // pancreatic ribonuclease activity // non-traceable author statement /// 0004522 // pancreatic ribonuclease activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr14:21156944-21168757 (+) // 86.55 // q11.2"]
["11744281_a_at",0.36902475,-0.027063847,-0.07894325,0.53823805,0.018740654,-0.018740177,0.8857288,0.7088661,-1.0656549,-0.09174028,1.0656549,"down","FAM53B",9679,"","","","chr10:126307862-126432930 (-) // 97.86 // q26.13"]
["11730893_a_at",-0.02717495,0.15843964,0.02717495,0.20111084,-0.078235626,-0.0747242,0.9054129,0.7500107,1.0258095,0.036762875,1.0258095,"up","UBA6",55236,"0006464 // cellular protein modification process // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008641 // small protein activating enzyme activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019780 // FAT10 activating enzyme activity // inferred from mutant phenotype /// 0019780 // FAT10 activating enzyme activity // inferred from electronic annotation","chr4:68481309-68566897 (-) // 86.19 // q13.2"]
["200092_PM_s_at",-0.012534142,-0.062203407,-0.06963444,0.14256477,0.08475876,0.012534142,0.22085558,0.03715131,-1.0928358,-0.12807663,1.0928358,"down","RPL37",6167,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0019843 // rRNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:40832569-40835312 (-) // 90.1 // p13.1"]
["11730368_at",-0.14610338,-0.24032116,-0.13135529,0.23860455,0.1336031,0.13135481,0.058770083,0.002282033,-1.2661492,-0.34044737,1.2661492,"down","ZNF557",79230,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:7069454-7088455 (+) // 57.71 // p13.2"]
["11739751_s_at",0.016746521,-0.13118744,-0.016746521,0.2595768,0.10963726,-0.032626152,0.48304385,0.17790763,-1.1141359,-0.15592517,1.1141359,"down","SLC25A16",8034,"0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006810 // transport // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0009108 // coenzyme biosynthetic process // traceable author statement /// 0015939 // pantothenate metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // non-traceable author statement /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0015300 // solute:solute antiporter activity // non-traceable author statement","chr10:70242001-70287783 (-) // 83.33 // q21.3"]
["11761145_a_at",-0.07595396,-0.12624693,-0.16025496,0.44530773,0.07595348,0.18735313,0.21007217,0.03337287,-1.2807807,-0.35702345,1.2807807,"down","ZNF273",10793,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:64363624-64854161 (+) // 31.12 // q11.21"]
["11721087_x_at",-0.011223078,-0.07674432,0.048280716,0.042510748,-0.106122494,0.011223316,0.9809059,0.9452005,1.002939,0.004233842,1.002939,"up","YLPM1",56252,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr14:75230018-75304012 (+) // 98.34 // q24.3"]
["11733653_at",-0.2268138,-0.021512508,0.051899433,-0.125566,0.094947815,0.021512508,0.8228094,0.58625275,-1.0442306,-0.062440313,1.0442306,"down","FTMT",94033,"0006826 // iron ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // inferred from direct assay /// 0006879 // cellular iron ion homeostasis // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0051347 // positive regulation of transferase activity // inferred from direct assay /// 0051349 // positive regulation of lyase activity // inferred from direct assay /// 0051353 // positive regulation of oxidoreductase activity // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation","0004322 // ferroxidase activity // inferred from electronic annotation /// 0008199 // ferric iron binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046914 // transition metal ion binding // inferred from electronic annotation","chr5:121187595-121188524 (+) // 98.0 // q23.1"]
["11722291_s_at",-0.01944828,0.006661415,-0.067528725,0.2828002,0.06318712,-0.006661415,0.5044528,0.19460058,-1.1018138,-0.13988043,1.1018138,"down","ZBTB43",23099,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:129567282-129600489 (+) // 84.25 // q33.3"]
["11745895_a_at",0.14118433,0.099727154,0.15341234,-0.099727154,-0.22467327,-0.24827242,0.06403394,0.002736746,1.2503502,0.32233226,1.2503502,"up","UPF2",26019,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from mutant phenotype /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016070 // RNA metabolic process // inferred from electronic annotation /// 0016071 // mRNA metabolic process // traceable author statement /// 0031100 // organ regeneration // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0035145 // exon-exon junction complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr10:11962021-12077896 (-) // 92.91 // p14"]
["11749354_x_at",0.34919453,0.16748047,0.0981369,-0.0981369,-0.18525505,-0.22940636,0.12163643,0.011128151,1.2976218,0.37587002,1.2976218,"up","WDR41",55255,"","","","chr5:76734063-76916401 (-) // 96.61 // q13.3"]
["11738415_a_at",-0.016121387,-0.07419491,0.016121387,0.08827543,-0.050652027,0.1201458,0.57804745,0.2582636,-1.0550573,-0.077321336,1.0550573,"down","TBR1",10716,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007411 // axon guidance // inferred from electronic annotation /// 0007420 // brain development // traceable author statement /// 0030902 // hindbrain development // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement","chr2:162272619-162281573 (+) // 93.44 // q24.2"]
["11764047_at",-0.41501808,0.0281353,0.017964363,-0.032430172,-0.016815186,0.016815186,0.76303923,0.4873441,-1.0808474,-0.11216283,1.0808474,"down","CCIN",881,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // non-traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // non-traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0033150 // cytoskeletal calyx // inferred from electronic annotation","0005200 // structural constituent of cytoskeleton // non-traceable author statement","chr9:36170831-36171336 (-) // 100.0 // p13.3"]
["11716428_a_at",0.12494469,0.028162956,-0.028162956,0.03208828,-0.30388927,-0.24892807,0.41504294,0.13016877,1.1608846,0.21522458,1.1608846,"up","PMF1 /// PMF1-BGLAP","100527963 /// 11243","0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from mutant phenotype /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0000444 // MIS12/MIND type complex // inferred from direct assay /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0003713 // transcription coactivator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043522 // leucine zipper domain binding // inferred from physical interaction","chr1:156182797-156210096 (+) // 97.42 // q22"]
["11752222_s_at",-0.008097172,-0.20439672,0.008097172,0.18476534,0.13826036,-0.013346195,0.41860163,0.13211863,-1.1261185,-0.1713587,1.1261185,"down","ZNF137P",7696,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:53099908-53541926 (+) // 51.12 // q13.41"]
["11734388_s_at",-0.056554317,0.013736248,0.05655384,-0.049200058,-0.013736248,0.013736248,0.8338942,0.6072697,1.0146475,0.020978583,1.0146475,"up","RAB40A",142684,"0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chrX:102754063-102774417 (-) // 95.18 // q22.2"]
["11723025_at",-0.0038523674,-0.16287613,-0.2002449,0.0038523674,0.0068278313,0.2037139,0.3562863,0.09615018,-1.1437638,-0.19378912,1.1437638,"down","FAM26F",441168,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:116782916-116784933 (+) // 97.22 // q22.1"]
["11763585_s_at",-0.21941662,-0.13193035,-0.112026215,0.18564224,0.38632488,0.112026215,0.12800059,0.012362568,-1.3035587,-0.38245556,1.3035587,"down","TMPO",7112,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005521 // lamin binding // traceable author statement","chr12:98909413-98944126 (+) // 87.99 // q23.1"]
["11734157_a_at",-0.0032024384,0.05155611,0.024870872,-0.1981206,-0.06325722,0.0032029152,0.43932062,0.14587988,1.0795772,0.11046642,1.0795772,"up","LENG1",79165,"","","0004872 // receptor activity // inferred from electronic annotation","chr19:54659378-54663468 (-) // 96.6 // q13.42"]
["11741537_a_at",0.0052495003,0.2072649,0.26487732,-0.11025286,-0.0052495003,-0.06537342,0.28129777,0.060042202,1.1642674,0.21942246,1.1642674,"up","KIF13A",63971,"0000910 // cytokinesis // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from mutant phenotype /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008333 // endosome to lysosome transport // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0032438 // melanosome organization // inferred from mutant phenotype /// 0035459 // cargo loading into vesicle // inferred from mutant phenotype /// 0043001 // Golgi to plasma membrane protein transport // inferred from sequence or structural similarity /// 0051301 // cell division // inferred from electronic annotation /// 0072383 // plus-end-directed vesicle transport along microtubule // inferred from sequence or structural similarity","0000139 // Golgi membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from mutant phenotype /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from direct assay /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0030496 // midbody // inferred from electronic annotation /// 0032588 // trans-Golgi network membrane // inferred from sequence or structural similarity","0000166 // nucleotide binding // inferred from electronic annotation /// 0003777 // microtubule motor activity // inferred from sequence or structural similarity /// 0003777 // microtubule motor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation","chr6:17763927-17987799 (-) // 97.06 // p22.3"]
["11722856_a_at",0.011687756,-0.04801011,-0.00549984,-0.083927155,0.062333107,0.00549984,0.95024514,0.861531,-1.0059621,-0.008576,1.0059621,"down","PDGFD",80310,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0050730 // regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation","0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0008083 // growth factor activity // inferred from electronic annotation","chr11:103777913-104035129 (-) // 98.57 // q22.3"]
["11757156_s_at",-0.07956886,-0.050240517,-0.14527512,0.40877247,0.24680614,0.050240517,0.223492,0.03823729,-1.2543743,-0.32696787,1.2543743,"down","SNHG12 /// SNORA16A /// SNORA44 /// SNORA61","677825 /// 677838 /// 692073 /// 85028","","","","chr1:28906275-28906405 (-) // 100.0 // p35.3"]
["11757265_x_at",-0.0072784424,-0.13410473,-0.17658043,0.2203331,0.023469925,0.0072784424,0.34580547,0.09023356,-1.1405121,-0.18968177,1.1405121,"down","EIF3K",27335,"0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred by curator /// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // traceable author statement /// 0006413 // translational initiation // inferred from electronic annotation /// 0006446 // regulation of translational initiation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from direct assay /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from electronic annotation","0003743 // translation initiation factor activity // inferred by curator /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0043022 // ribosome binding // inferred from electronic annotation","chr19:39109850-39127592 (+) // 82.93 // q13.2"]
["11742639_a_at",0.45687532,0.31822634,0.24846458,-0.3694625,-0.2952819,-0.24846458,0.037180126,0.00079616584,1.5643808,0.6455917,1.5643808,"up","RDM1",201299,"0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015030 // Cajal body // inferred from electronic annotation /// 0016605 // PML body // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr17:34249481-34257780 (-) // 100.0 // q12"]
["11738690_s_at",0.116434574,-0.08099508,-0.1947174,-0.089781284,0.08099508,0.22911453,0.6897945,0.38360086,-1.091669,-0.12653545,1.091669,"down","OR52I1 /// OR52I2","143502 /// 390037","0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:4608020-4609135 (+) // 100.0 // p15.4 /// chr11:4615168-4616293 (+) // 95.7 // p15.4"]
["200082_PM_s_at",0.08083153,-0.01750946,-0.018808365,0.12407017,0.01750946,-0.036338806,0.90186304,0.7427237,-1.0141299,-0.020242427,1.0141299,"down","RPS7",6201,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006364 // rRNA processing // inferred from mutant phenotype /// 0006412 // translation // inferred by curator /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0042274 // ribosomal small subunit biogenesis // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from direct assay /// 0005840 // ribosome // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // non-traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030686 // 90S preribosome // not recorded /// 0032040 // small-subunit processome // not recorded","0003723 // RNA binding // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr2:3622908-3628502 (+) // 83.42 // p25.3"]
["11759536_a_at",0.52332306,-0.041023254,0.041023254,0.24718285,-0.18186855,-0.30481339,0.66679734,0.35420936,1.1927354,0.25427407,1.1927354,"up","TTC17",55761,"0042981 // regulation of apoptotic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","","chr11:43380434-43516470 (+) // 98.79 // p12"]
["11756196_a_at",0.08248997,0.13039303,0.079377174,-0.14111042,-0.079377174,-0.34942102,0.18561368,0.02609752,1.22043,0.28738958,1.22043,"up","MTHFD1L",25902,"0006730 // one-carbon metabolic process // inferred from electronic annotation /// 0006760 // folic acid-containing compound metabolic process // inferred from direct assay /// 0009396 // folic acid-containing compound biosynthetic process // inferred from electronic annotation /// 0015942 // formate metabolic process // inferred from direct assay /// 0035999 // tetrahydrofolate interconversion // inferred from electronic annotation /// 0046653 // tetrahydrofolate metabolic process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004329 // formate-tetrahydrofolate ligase activity // inferred from direct assay /// 0004329 // formate-tetrahydrofolate ligase activity // inferred from electronic annotation /// 0004488 // methylenetetrahydrofolate dehydrogenase (NADP+) activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay","chr6:151187617-151220136 (+) // 70.84 // q25.1"]
["11753588_x_at",0.08534241,0.1303711,0.10112476,-0.08534336,-0.08643055,-0.08921528,0.01994426,0.00012989591,1.1428287,0.19260918,1.1428287,"up","RTN4",57142,"0001525 // angiogenesis // inferred from electronic annotation /// 0006915 // apoptotic process // non-traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007413 // axonal fasciculation // inferred from sequence or structural similarity /// 0007413 // axonal fasciculation // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0010977 // negative regulation of neuron projection development // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0019987 // negative regulation of anti-apoptosis // inferred from mutant phenotype /// 0021553 // olfactory nerve development // inferred from electronic annotation /// 0021801 // cerebral cortex radial glia guided migration // inferred from sequence or structural similarity /// 0021801 // cerebral cortex radial glia guided migration // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0030334 // regulation of cell migration // inferred from direct assay /// 0030517 // negative regulation of axon extension // inferred from direct assay /// 0030517 // negative regulation of axon extension // inferred from electronic annotation /// 0033603 // positive regulation of dopamine secretion // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // non-traceable author statement /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045687 // positive regulation of glial cell differentiation // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048679 // regulation of axon regeneration // inferred from electronic annotation /// 0048709 // oligodendrocyte differentiation // inferred from electronic annotation /// 0050770 // regulation of axonogenesis // traceable author statement /// 0050771 // negative regulation of axonogenesis // traceable author statement /// 0050771 // negative regulation of axonogenesis // inferred from electronic annotation /// 0051930 // regulation of sensory perception of pain // inferred from electronic annotation /// 0051960 // regulation of nervous system development // inferred from electronic annotation /// 0060317 // cardiac epithelial to mesenchymal transition // inferred from electronic annotation /// 0070571 // negative regulation of neuron projection regeneration // inferred from electronic annotation /// 0071786 // endoplasmic reticulum tubular network organization // inferred from mutant phenotype /// 2000172 // regulation of branching morphogenesis of a nerve // inferred from sequence or structural similarity /// 2000172 // regulation of branching morphogenesis of a nerve // inferred from electronic annotation","0005635 // nuclear envelope // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // non-traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // inferred from direct assay /// 0030176 // integral to endoplasmic reticulum membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043209 // myelin sheath // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation","chr2:55200291-55237256 (-) // 99.5 // p16.1"]
["11733857_x_at",0.03431511,0.25195312,0.2503872,-0.16752625,-0.03431511,-0.07842636,0.19735299,0.02960195,1.2077382,0.2723077,1.2077382,"up","EGLN1",54583,"0001666 // response to hypoxia // inferred from direct assay /// 0032364 // oxygen homeostasis // inferred from direct assay /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0045765 // regulation of angiogenesis // inferred from sequence or structural similarity /// 0045765 // regulation of angiogenesis // inferred from electronic annotation /// 0055008 // cardiac muscle tissue morphogenesis // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060347 // heart trabecula formation // inferred from electronic annotation /// 0060412 // ventricular septum morphogenesis // inferred from electronic annotation /// 0060711 // labyrinthine layer development // inferred from electronic annotation /// 0071731 // response to nitric oxide // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005506 // iron ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from electronic annotation /// 0031418 // L-ascorbic acid binding // inferred from electronic annotation /// 0031543 // peptidyl-proline dioxygenase activity // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:231499496-231560790 (-) // 85.4 // q42.2"]
["11716185_a_at",0.05578804,-0.22919273,-0.21236801,0.6075821,-0.020952225,0.020952225,0.5261527,0.21160083,-1.2579881,-0.33111826,1.2579881,"down","ALCAM",214,"0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from electronic annotation","0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0005102 // receptor binding // traceable author statement","chr3:105085712-105295746 (+) // 96.66 // q13.11"]
["11758199_s_at",0.0107040405,-0.11863613,-0.1841402,0.25185394,0.29602432,-0.0107040405,0.29986832,0.06835001,-1.2111819,-0.27641553,1.2111819,"down","RAD23B",5887,"0000715 // nucleotide-excision repair, DNA damage recognition // inferred from direct assay /// 0000715 // nucleotide-excision repair, DNA damage recognition // traceable author statement /// 0000718 // nucleotide-excision repair, DNA damage removal // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006289 // nucleotide-excision repair // inferred from direct assay /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0032434 // regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation","0000502 // proteasome complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0071942 // XPC complex // inferred from direct assay","0003684 // damaged DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0031593 // polyubiquitin binding // inferred from direct assay","chr9:110092634-110093174 (+) // 93.1 // q31.2"]
["11736565_at",0.3795719,-0.012763023,0.012763023,0.03357458,-0.31157017,-0.28161144,0.4242126,0.13598932,1.2423396,0.3130596,1.2423396,"up","PTPN14",5784,"0001946 // lymphangiogenesis // inferred from mutant phenotype /// 0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0030971 // receptor tyrosine kinase binding // inferred from physical interaction","chr1:214530673-214725024 (-) // 99.92 // q41"]
["11745130_x_at",0.2142334,-0.0569849,-0.0074357986,0.2968788,0.0074357986,-0.007950783,0.8934018,0.72526354,-1.0344403,-0.048850358,1.0344403,"down","HMGB3",3149,"0006310 // DNA recombination // inferred from sequence or structural similarity /// 0007275 // multicellular organismal development // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from sequence or structural similarity /// 0008301 // DNA binding, bending // inferred from sequence or structural similarity /// 0008301 // DNA binding, bending // traceable author statement","chrX:150151857-150156403 (+) // 74.39 // q28"]
["11741846_at",-0.011744499,-0.04125166,0.011744499,-0.37321758,0.032514095,0.3447256,0.9811576,0.9457487,-1.0105153,-0.015091212,1.0105153,"down","RAPH1",65059,"0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation","chr2:204306193-204400058 (-) // 96.63 // q33.2"]
["11737333_at",-0.0010154247,-0.048011065,0.03504896,0.0010151863,-0.13823605,0.13316369,0.9896643,0.9697513,-1.0022947,-0.0033067015,1.0022947,"down","SIM1",6492,"0001657 // ureteric bud development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr6:100836078-100912805 (-) // 93.49 // q16.3"]
["11732306_x_at",-0.8668785,-0.16096306,-0.12325096,0.22752428,0.47631502,0.12325096,0.2968338,0.06661829,-1.5794194,-0.65939426,1.5794194,"down","CREB1",1385,"0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007595 // lactation // inferred from electronic annotation /// 0008063 // Toll signaling pathway // traceable author statement /// 0008361 // regulation of cell size // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0010033 // response to organic substance // inferred from direct assay /// 0010944 // negative regulation of transcription by competitive promoter binding // inferred from direct assay /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030879 // mammary gland development // inferred from electronic annotation /// 0032916 // positive regulation of transforming growth factor beta3 production // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0040018 // positive regulation of multicellular organism growth // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042752 // regulation of circadian rhythm // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045600 // positive regulation of fat cell differentiation // inferred from sequence or structural similarity /// 0045600 // positive regulation of fat cell differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046887 // positive regulation of hormone secretion // inferred from electronic annotation /// 0046889 // positive regulation of lipid biosynthetic process // inferred from sequence or structural similarity /// 0046889 // positive regulation of lipid biosynthetic process // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0050821 // protein stabilization // inferred from sequence or structural similarity /// 0050821 // protein stabilization // inferred from electronic annotation /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation","0000785 // chromatin // inferred from electronic annotation /// 0000790 // nuclear chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005719 // nuclear euchromatin // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0001102 // RNA polymerase II activating transcription factor binding // inferred from physical interaction /// 0001190 // RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003712 // transcription cofactor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0035497 // cAMP response element binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr2:208394615-208470713 (+) // 82.36 // q33.3"]
["11753936_x_at",-0.11397743,-0.006331444,-0.24247408,0.006331444,0.023320198,0.057386875,0.36087906,0.09848466,-1.1095237,-0.14994042,1.1095237,"down","TRPM2",7226,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // traceable author statement /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006828 // manganese ion transport // inferred from electronic annotation /// 0033194 // response to hydroperoxide // inferred from electronic annotation /// 0035725 // sodium ion transmembrane transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // traceable author statement /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation /// 0071421 // manganese ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // traceable author statement /// 0005272 // sodium channel activity // inferred from electronic annotation /// 0005384 // manganese ion transmembrane transporter activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0047631 // ADP-ribose diphosphatase activity // inferred from electronic annotation","chr21:45770045-45862960 (+) // 98.3 // q22.3"]
["11751393_a_at",-0.03191471,-0.17854214,-0.0523448,0.031914234,0.077867985,0.05161667,0.23386195,0.04148866,-1.1029751,-0.14140026,1.1029751,"down","PIK3IP1",113791,"0016310 // phosphorylation // inferred from electronic annotation /// 0033673 // negative regulation of kinase activity // inferred from sequence or structural similarity /// 0033673 // negative regulation of kinase activity // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016301 // kinase activity // inferred from electronic annotation","chr22:31678573-31688445 (-) // 97.68 // q12.2"]
["11719439_at",0.15240002,0.22019434,0.27731943,-0.33274794,-0.15240002,-0.24721861,0.05393866,0.0019012811,1.3762667,0.4607601,1.3762667,"up","SRGAP2",23380,"0003363 // lamellipodium assembly involved in ameboidal cell migration // inferred from mutant phenotype /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0021816 // extension of a leading process involved in cell motility in cerebral cortex radial glia guided migration // inferred from sequence or structural similarity /// 0032855 // positive regulation of Rac GTPase activity // inferred from direct assay /// 0032855 // positive regulation of Rac GTPase activity // inferred from mutant phenotype /// 0034446 // substrate adhesion-dependent cell spreading // inferred from mutant phenotype /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0046847 // filopodium assembly // inferred from direct assay /// 0048812 // neuron projection morphogenesis // inferred from sequence or structural similarity /// 0051014 // actin filament severing // inferred from direct assay /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0060548 // negative regulation of cell death // inferred from mutant phenotype /// 0060996 // dendritic spine development // inferred from direct assay /// 2001223 // negative regulation of neuron migration // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0014069 // postsynaptic density // inferred from sequence or structural similarity /// 0030027 // lamellipodium // inferred from direct assay /// 0044327 // dendritic spine head // inferred from direct assay /// 0045211 // postsynaptic membrane // inferred from sequence or structural similarity /// 0045335 // phagocytic vesicle // inferred from sequence or structural similarity","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030675 // Rac GTPase activator activity // inferred from direct assay /// 0030675 // Rac GTPase activator activity // inferred from mutant phenotype /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0048365 // Rac GTPase binding // inferred from direct assay","chr1:206516199-206637776 (+) // 92.53 // q32.1"]
["11751110_a_at",0.3020382,0.18391418,0.16706038,-0.1670599,-0.28417253,-0.2019105,0.047042742,0.0013638062,1.3522719,0.43538526,1.3522719,"up","FBXL2",25827,"0006464 // cellular protein modification process // traceable author statement /// 0006508 // proteolysis // traceable author statement /// 0016567 // protein ubiquitination // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005737 // cytoplasm // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr3:33318942-33427515 (+) // 100.0 // p22.3"]
["11756657_a_at",0.38842392,-0.026432991,-0.36546707,-0.11396527,0.036627293,0.026432991,0.981657,0.9469662,1.0110186,0.015809588,1.0110186,"up","RPS6KA2",6196,"0000089 // mitotic metaphase // inferred from electronic annotation /// 0001556 // oocyte maturation // inferred from electronic annotation /// 0002035 // brain renin-angiotensin system // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007243 // intracellular protein kinase cascade // traceable author statement /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0008063 // Toll signaling pathway // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010659 // cardiac muscle cell apoptotic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035556 // intracellular signal transduction // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045786 // negative regulation of cell cycle // inferred from direct assay /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0060047 // heart contraction // inferred from electronic annotation /// 0070613 // regulation of protein processing // inferred from electronic annotation /// 0071322 // cellular response to carbohydrate stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004711 // ribosomal protein S6 kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:166825097-166958178 (-) // 99.75 // q27"]
["11751443_a_at",0.0070939064,-0.0070939064,-0.23929977,0.21745634,-0.16980076,0.17132568,0.66681695,0.35425875,-1.1116945,-0.15276033,1.1116945,"down","SH3BP5L",80851,"","","","chr1:249105898-249111272 (-) // 99.38 // q44"]
["11759216_at",0.00541687,-0.015172482,0.10598421,-0.00541687,-0.08672333,0.34973574,0.8902272,0.718742,-1.0379875,-0.053789027,1.0379875,"down","PCDHB13",56123,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007416 // synapse assembly // traceable author statement /// 0016339 // calcium-dependent cell-cell adhesion // non-traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr5:140593299-140598551 (+) // 82.28 // q31.3"]
["11760361_x_at",0.029697657,0.16013837,0.044675827,-0.19803548,-0.10026789,-0.029697657,0.23685092,0.042585846,1.138792,0.1875043,1.138792,"up","SULT1C4",27233,"0006805 // xenobiotic metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050427 // 3'-phosphoadenosine 5'-phosphosulfate metabolic process // traceable author statement /// 0051923 // sulfation // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0008146 // sulfotransferase activity // inferred from direct assay /// 0008146 // sulfotransferase activity // inferred from electronic annotation /// 0008146 // sulfotransferase activity // non-traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation","chr2:108994147-108999358 (+) // 84.17 // q12.3"]
["11725884_s_at",0.40408802,0.30683184,0.17368412,-0.1736846,-0.32183647,-0.56539917,0.10511037,0.008030272,1.5675464,0.64850813,1.5675464,"up","CNEP1R1",255919,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0010867 // positive regulation of triglyceride biosynthetic process // inferred from genetic interaction /// 0034504 // protein localization to nucleus // inferred from direct assay /// 0035307 // positive regulation of protein dephosphorylation // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0071595 // Nem1-Spo7 phosphatase complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr16:50059135-50070992 (+) // 83.14 // q12.1"]
["11731233_at",0.10681009,0.08136368,0.09086132,-0.27611613,-0.08136368,-0.08828068,0.16135152,0.01974633,1.1823019,0.24159844,1.1823019,"up","NTF4",4909,"0007402 // ganglion mother cell fate determination // inferred from sequence or structural similarity /// 0007402 // ganglion mother cell fate determination // inferred from electronic annotation /// 0007616 // long-term memory // inferred from sequence or structural similarity /// 0007616 // long-term memory // inferred from electronic annotation /// 0008052 // sensory organ boundary specification // inferred from sequence or structural similarity /// 0008052 // sensory organ boundary specification // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from sequence or structural similarity /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0008544 // epidermis development // inferred from sequence or structural similarity /// 0008544 // epidermis development // inferred from electronic annotation","0005576 // extracellular region // inferred from sequence or structural similarity /// 0005576 // extracellular region // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // inferred from sequence or structural similarity","0005102 // receptor binding // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation /// 0008083 // growth factor activity // traceable author statement","chr19:49564145-49567125 (-) // 95.76 // q13.33"]
["11717718_at",-0.111349106,0.0841465,0.16400528,-0.110975266,-0.015825272,0.015825272,0.7106247,0.41179916,1.0589193,0.08259266,1.0589193,"up","FNDC3B",64778,"0045600 // positive regulation of fat cell differentiation // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:171830240-172118493 (+) // 94.7 // q26.31"]
["11738225_at",-0.52158356,0.07643509,0.10417795,-0.29356337,0.011959553,-0.011959553,0.98200643,0.94772017,-1.0110136,-0.015802443,1.0110136,"down","IQCF1",132141,"","","","chr3:51928891-51937386 (-) // 97.46 // p21.2"]
["11730276_at",0.024278164,0.40272093,-0.024278164,-0.07633686,0.04842472,-0.057541132,0.6293583,0.31106853,1.1193993,0.16272476,1.1193993,"up","SULT2A1",6822,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0007586 // digestion // non-traceable author statement /// 0008202 // steroid metabolic process // traceable author statement /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0030573 // bile acid catabolic process // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050427 // 3'-phosphoadenosine 5'-phosphosulfate metabolic process // traceable author statement /// 0051923 // sulfation // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0008146 // sulfotransferase activity // inferred from direct assay /// 0008146 // sulfotransferase activity // traceable author statement /// 0008146 // sulfotransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0047704 // bile-salt sulfotransferase activity // inferred from electronic annotation","chr19:48373722-48389654 (-) // 78.19 // q13.33"]
["11736138_x_at",0.18252349,-0.12769532,-0.038977623,-0.18516755,0.04302621,0.038977623,0.9076724,0.75587,1.0278797,0.039671447,1.0278797,"up","CTNNA2",1496,"0007155 // cell adhesion // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from sequence or structural similarity /// 0007409 // axonogenesis // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from sequence or structural similarity /// 0021942 // radial glia guided migration of Purkinje cell // inferred from sequence or structural similarity /// 0021942 // radial glia guided migration of Purkinje cell // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042692 // muscle cell differentiation // traceable author statement /// 0048813 // dendrite morphogenesis // inferred from sequence or structural similarity /// 0048813 // dendrite morphogenesis // inferred from electronic annotation /// 0048854 // brain morphogenesis // inferred from sequence or structural similarity /// 0048854 // brain morphogenesis // inferred from electronic annotation /// 0051149 // positive regulation of muscle cell differentiation // traceable author statement /// 0051823 // regulation of synapse structural plasticity // inferred from sequence or structural similarity /// 0051823 // regulation of synapse structural plasticity // inferred from electronic annotation /// 0060134 // prepulse inhibition // inferred from sequence or structural similarity /// 0060134 // prepulse inhibition // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005912 // adherens junction // inferred from sequence or structural similarity /// 0005912 // adherens junction // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030424 // axon // inferred from sequence or structural similarity /// 0030424 // axon // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0045296 // cadherin binding // inferred from electronic annotation","chr2:79740037-80875904 (+) // 98.4 // p12"]
["11745288_a_at",0.2727797,0.16623974,-0.06478381,-0.3956952,-0.1266501,0.06478381,0.47399116,0.17144096,1.2118958,0.2772657,1.2118958,"up","NOX5",79400,"0000910 // cytokinesis // non-traceable author statement /// 0001525 // angiogenesis // inferred from direct assay /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001935 // endothelial cell proliferation // inferred from direct assay /// 0006811 // ion transport // inferred from electronic annotation /// 0006917 // induction of apoptosis // non-traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008283 // cell proliferation // non-traceable author statement /// 0010155 // regulation of proton transport // non-traceable author statement /// 0015992 // proton transport // inferred from direct assay /// 0022900 // electron transport chain // inferred from electronic annotation /// 0042554 // superoxide anion generation // inferred from direct assay /// 0043012 // regulation of fusion of sperm to egg plasma membrane // non-traceable author statement /// 0050663 // cytokine secretion // non-traceable author statement /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from direct assay","0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0015252 // hydrogen ion channel activity // inferred from direct assay /// 0016175 // superoxide-generating NADPH oxidase activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0020037 // heme binding // non-traceable author statement /// 0050660 // flavin adenine dinucleotide binding // non-traceable author statement /// 0050661 // NADP binding // non-traceable author statement","chr15:69222869-69349500 (+) // 63.17 // q23"]
["11739952_a_at",-0.07998896,-0.12487745,-0.19235468,0.12738228,0.07998943,0.20658445,0.08673355,0.0053801313,-1.2061359,-0.27039242,1.2061359,"down","GFOD1",54438,"0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation","chr6:13363503-13487894 (-) // 98.24 // p24.1"]
["11754406_a_at",-0.004304886,0.041262627,0.11488438,0.004304886,-0.036756516,-0.12992859,0.3953742,0.11804795,1.0753012,0.10474078,1.0753012,"up","LONP2",83752,"0006465 // signal peptide processing // inferred from mutant phenotype /// 0006508 // proteolysis // inferred from electronic annotation /// 0006515 // misfolded or incompletely synthesized protein catabolic process // not recorded /// 0006625 // protein targeting to peroxisome // non-traceable author statement /// 0007031 // peroxisome organization // non-traceable author statement /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0031998 // regulation of fatty acid beta-oxidation // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation /// 0005782 // peroxisomal matrix // not recorded /// 0005782 // peroxisomal matrix // inferred from electronic annotation /// 0009295 // nucleoid // not recorded","0000166 // nucleotide binding // inferred from electronic annotation /// 0002020 // protease binding // inferred from physical interaction /// 0004176 // ATP-dependent peptidase activity // not recorded /// 0004176 // ATP-dependent peptidase activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // not recorded /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // not recorded /// 0005524 // ATP binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from direct assay /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // not recorded","chr16:48286219-48385913 (+) // 99.28 // q12.1"]
["11715853_a_at",0.12088013,0.0168643,-0.016863823,-0.02695179,-0.12088108,0.11366463,0.8035031,0.5523601,1.0364733,0.051682916,1.0364733,"up","PDGFRB",5159,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001894 // tissue homeostasis // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006807 // nitrogen compound metabolic process // inferred from electronic annotation /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007165 // signal transduction // inferred from direct assay /// 0007165 // signal transduction // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0010863 // positive regulation of phospholipase C activity // inferred from direct assay /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // inferred from sequence or structural similarity /// 0014911 // positive regulation of smooth muscle cell migration // inferred from mutant phenotype /// 0014911 // positive regulation of smooth muscle cell migration // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // inferred from mutant phenotype /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0030325 // adrenal gland development // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0032516 // positive regulation of phosphoprotein phosphatase activity // inferred from direct assay /// 0032956 // regulation of actin cytoskeleton organization // inferred from sequence or structural similarity /// 0035441 // cell migration involved in vasculogenesis // inferred from sequence or structural similarity /// 0035791 // platelet-derived growth factor receptor-beta signaling pathway // inferred from direct assay /// 0035791 // platelet-derived growth factor receptor-beta signaling pathway // inferred from mutant phenotype /// 0035793 // positive regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway // inferred from sequence or structural similarity /// 0035909 // aorta morphogenesis // inferred from sequence or structural similarity /// 0036120 // cellular response to platelet-derived growth factor stimulus // traceable author statement /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from electronic annotation /// 0038091 // positive regulation of cell proliferation by VEGF-activated platelet derived growth factor receptor signaling pathway // inferred from direct assay /// 0043406 // positive regulation of MAP kinase activity // inferred from sequence or structural similarity /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from direct assay /// 0045840 // positive regulation of mitosis // inferred from sequence or structural similarity /// 0046488 // phosphatidylinositol metabolic process // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from direct assay /// 0048008 // platelet-derived growth factor receptor signaling pathway // traceable author statement /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from electronic annotation /// 0048015 // phosphatidylinositol-mediated signaling // inferred from mutant phenotype /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from mutant phenotype /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from sequence or structural similarity /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0048745 // smooth muscle tissue development // inferred from electronic annotation /// 0050730 // regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050921 // positive regulation of chemotaxis // inferred from sequence or structural similarity /// 0055003 // cardiac myofibril assembly // inferred from sequence or structural similarity /// 0060326 // cell chemotaxis // inferred from direct assay /// 0060981 // cell migration involved in coronary angiogenesis // inferred from sequence or structural similarity /// 0061298 // retina vasculature development in camera-type eye // inferred from sequence or structural similarity /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from mutant phenotype /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from sequence or structural similarity /// 0071670 // smooth muscle cell chemotaxis // inferred from sequence or structural similarity /// 0072262 // metanephric glomerular mesangial cell proliferation involved in metanephros development // inferred from sequence or structural similarity /// 0072277 // metanephric glomerular capillary formation // inferred from sequence or structural similarity /// 0090280 // positive regulation of calcium ion import // inferred from sequence or structural similarity /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from sequence or structural similarity /// 2000573 // positive regulation of DNA biosynthetic process // inferred from sequence or structural similarity","0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005764 // lysosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from sequence or structural similarity /// 0031226 // intrinsic to plasma membrane // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043202 // lysosomal lumen // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004992 // platelet activating factor receptor activity // traceable author statement /// 0005017 // platelet-derived growth factor-activated receptor activity // traceable author statement /// 0005019 // platelet-derived growth factor beta-receptor activity // inferred from direct assay /// 0005019 // platelet-derived growth factor beta-receptor activity // inferred from mutant phenotype /// 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005161 // platelet-derived growth factor receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0038085 // vascular endothelial growth factor binding // inferred from physical interaction /// 0048407 // platelet-derived growth factor binding // inferred from direct assay /// 0048407 // platelet-derived growth factor binding // inferred from physical interaction","chr5:149493401-149535469 (-) // 95.29 // q32"]
["11746640_a_at",-0.00208807,0.00208807,0.20166826,-0.38258076,-0.24460077,0.06851053,0.46587998,0.16510984,1.1920514,0.25344646,1.1920514,"up","RASSF2",9770,"0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr20:4760675-4803050 (-) // 92.98 // p13"]
["11723144_at",-0.17138433,0.003830433,0.060486317,-0.17138433,0.019426823,-0.003830433,0.9534329,0.86860746,1.0113204,0.016240068,1.0113204,"up","NALCN",259232,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0035725 // sodium ion transmembrane transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005272 // sodium channel activity // inferred from electronic annotation","chr13:101706128-102068825 (-) // 98.67 // q33.1"]
["11759008_at",-0.21057224,-0.1302619,0.037070274,0.07971883,-0.037070274,0.29537964,0.45010024,0.1535143,-1.1598439,-0.21393068,1.1598439,"down","TBX4",9496,"0001525 // angiogenesis // inferred from electronic annotation /// 0002009 // morphogenesis of an epithelium // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // non-traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0035108 // limb morphogenesis // inferred from mutant phenotype /// 0035108 // limb morphogenesis // inferred from electronic annotation /// 0048705 // skeletal system morphogenesis // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation","chr17:59529778-59562471 (+) // 93.46 // q23.2"]
["11753659_x_at",-0.0034914017,-0.031271935,-0.07849312,0.15533829,0.086527824,0.0034914017,0.30651176,0.07145163,-1.0863869,-0.11953801,1.0863869,"down","RPL30",6156,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation","chr8:99053948-99057767 (-) // 95.53 // q22.2"]
["11724027_s_at",0.037420273,0.026108742,-0.026108742,-0.10555363,-0.07473278,0.042455673,0.6202236,0.30034676,1.0413226,0.058417067,1.0413226,"up","PPP6R3",55291,"0043666 // regulation of phosphoprotein phosphatase activity // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0019903 // protein phosphatase binding // inferred from physical interaction","chr11:68228192-68382802 (+) // 96.16 // q13.2"]
["11748837_a_at",0.022522926,-0.09085655,-0.058437824,0.38751554,0.031793594,-0.02252245,0.57916677,0.25949064,-1.1285883,-0.17451932,1.1285883,"down","RAB30",27314,"0006184 // GTP catabolic process // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005795 // Golgi stack // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation","chr11:82692831-82745675 (-) // 99.93 // q14.1"]
["11724048_a_at",0.0025134087,0.041486263,0.046833515,-0.0025134087,-0.064837456,-0.11827421,0.29062873,0.06383154,1.0659596,0.09215272,1.0659596,"up","COG6",57511,"0006810 // transport // inferred from electronic annotation /// 0006891 // intra-Golgi vesicle-mediated transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0070085 // glycosylation // inferred from mutant phenotype","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0017119 // Golgi transport complex // inferred from direct assay /// 0017119 // Golgi transport complex // inferred from electronic annotation","","chr13:40229763-40326765 (+) // 93.59 // q14.11"]
["11722310_a_at",-0.26819563,0.0761075,0.006764412,-0.51447296,0.028683662,-0.006764412,0.8531797,0.6428762,1.0735654,0.10241003,1.0735654,"up","TMC4",147798,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr19:54663845-54676944 (-) // 91.04 // q13.42"]
["11757328_x_at",0.06230259,-0.0066900253,-0.047623634,0.118715286,0.0066900253,-0.113285065,0.99477446,0.9860945,-1.000955,-0.0013770956,1.000955,"down","RPL27",6155,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation","chr17:41150471-41154961 (+) // 76.69 // q21.31"]
["11742973_at",-0.014953613,-0.07443428,-0.051268578,0.09252739,0.014953613,0.05165291,0.17929722,0.024240244,-1.0717216,-0.09993012,1.0717216,"down","ACAT1",38,"0001889 // liver development // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009083 // branched chain family amino acid catabolic process // traceable author statement /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042594 // response to starvation // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046950 // cellular ketone body metabolic process // traceable author statement /// 0046951 // ketone body biosynthetic process // traceable author statement /// 0046952 // ketone body catabolic process // traceable author statement /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0060612 // adipose tissue development // inferred from electronic annotation /// 0072229 // metanephric proximal convoluted tubule development // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0003985 // acetyl-CoA C-acetyltransferase activity // not recorded /// 0003985 // acetyl-CoA C-acetyltransferase activity // inferred from electronic annotation /// 0003985 // acetyl-CoA C-acetyltransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050662 // coenzyme binding // inferred from electronic annotation","chr11:107992242-108019001 (+) // 99.6 // q22.3"]
["11751645_x_at",0.05709219,0.21302938,0.2791896,-0.15141916,-0.12223148,-0.05709219,0.14037578,0.014816974,1.2254838,0.29335138,1.2254838,"up","PBXIP1",57326,"0007275 // multicellular organismal development // non-traceable author statement /// 0030154 // cell differentiation // non-traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // non-traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // non-traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr1:154918045-154928603 (-) // 99.8 // q21.3"]
["11757133_s_at",0.0032215118,-0.009791374,-0.026830673,0.18200302,0.015713692,-0.0032215118,0.5900621,0.2706437,-1.0540661,-0.075965285,1.0540661,"down","MIR1304 /// SNORA1 /// SNORA18 /// SNORA32 /// SNORA40 /// SNORA8 /// SNORD5 /// TAF1D","100302240 /// 654320 /// 677792 /// 677805 /// 677822 /// 692063 /// 692072 /// 79101","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr11:93465526-93465665 (-) // 100.0 // q21"]
["11740560_x_at",-0.6567397,-0.71995974,-0.5128498,0.65849113,0.5128498,0.52339745,0.018439455,0.000101539255,-2.2890713,-1.1947623,2.2890713,"down","NSMAF",8439,"0006672 // ceramide metabolic process // traceable author statement /// 0007165 // signal transduction // traceable author statement","0005625 // soluble fraction // traceable author statement /// 0005737 // cytoplasm // traceable author statement","0005057 // receptor signaling protein activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr8:59496065-59572942 (-) // 72.29 // q12.1"]
["11721474_a_at",-0.015107632,0.0009088516,-0.14561462,0.15389156,-0.0009088516,0.30953217,0.37961474,0.108999506,-1.1546397,-0.20744276,1.1546397,"down","GPM6B",2824,"0001503 // ossification // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // non-traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030501 // positive regulation of bone mineralization // inferred from mutant phenotype /// 0032956 // regulation of actin cytoskeleton organization // inferred from mutant phenotype /// 0051612 // negative regulation of serotonin uptake // inferred from sequence or structural similarity /// 0051893 // regulation of focal adhesion assembly // inferred from mutant phenotype /// 0085029 // extracellular matrix assembly // inferred from mutant phenotype /// 2000009 // negative regulation of protein localization at cell surface // inferred from sequence or structural similarity","0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from sequence or structural similarity","","chrX:13790459-13835314 (-) // 98.71 // p22.2"]
["11737060_a_at",0.009223461,-0.009223461,0.011658192,0.08272362,-0.019266605,-0.014974117,0.89817274,0.73597574,-1.0085446,-0.012274833,1.0085446,"down","MTMR3",8897,"0006470 // protein dephosphorylation // inferred from direct assay /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from direct assay /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0046856 // phosphatidylinositol dephosphorylation // inferred from direct assay","0005624 // membrane fraction // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004438 // phosphatidylinositol-3-phosphatase activity // inferred from direct assay /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr22:30279157-30426855 (+) // 99.68 // q12.2"]
["11756569_a_at",-0.0926857,0.091423035,0.12681484,-0.21938992,0.0025253296,-0.0025253296,0.6321239,0.3138596,1.0829606,0.114980765,1.0829606,"up","NUSAP1",51203,"0000070 // mitotic sister chromatid segregation // inferred from direct assay /// 0000281 // cytokinesis after mitosis // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007076 // mitotic chromosome condensation // inferred from direct assay /// 0040001 // establishment of mitotic spindle localization // inferred from direct assay /// 0045840 // positive regulation of mitosis // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr15:41625050-41672424 (+) // 98.2 // q15.1"]
["11740405_at",-0.040284157,0.12990236,0.040284157,-0.055044174,0.07726765,-0.04956627,0.7500736,0.4680994,1.0369993,0.052414984,1.0369993,"up","LHX4",89884,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0021526 // medial motor column neuron differentiation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:180199441-180244188 (+) // 96.61 // q25.2"]
["11753167_a_at",-0.050384045,0.31541824,-0.016944885,-0.12681818,0.016944408,0.26883602,0.95155287,0.8653205,1.0208062,0.029708987,1.0208062,"up","SYPL2",284612,"0006810 // transport // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation","0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation","chr1:110009179-110022410 (+) // 94.19 // p13.3"]
["11752292_s_at",0.18735981,0.2012577,0.07906723,-0.09820843,-0.18792534,-0.07906723,0.088328116,0.0055931197,1.2122008,0.27762866,1.2122008,"up","KAT7",11143,"0006260 // DNA replication // inferred from direct assay /// 0006260 // DNA replication // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016573 // histone acetylation // inferred from electronic annotation /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0043981 // histone H4-K5 acetylation // inferred from direct assay /// 0043982 // histone H4-K8 acetylation // inferred from direct assay /// 0043983 // histone H4-K12 acetylation // inferred from direct assay /// 0043984 // histone H4-K16 acetylation // inferred from direct assay","0000123 // histone acetyltransferase complex // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:47867014-47905181 (+) // 90.98 // q21.33"]
["11717445_a_at",-0.10163593,-0.16033554,-0.19533443,0.10274124,0.10163593,0.18192959,0.053214163,0.0018015832,-1.2152088,-0.2812042,1.2152088,"down","DHPS",1725,"0006412 // translation // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0008612 // peptidyl-lysine modification to hypusine // traceable author statement /// 0008612 // peptidyl-lysine modification to hypusine // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0050983 // deoxyhypusine biosynthetic process from spermidine // inferred from electronic annotation /// 0050983 // deoxyhypusine biosynthetic process from spermidine // traceable author statement /// 0051289 // protein homotetramerization // inferred from electronic annotation","0005829 // cytosol // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0034038 // deoxyhypusine synthase activity // traceable author statement /// 0034038 // deoxyhypusine synthase activity // inferred from electronic annotation","chr19:12786530-12792716 (-) // 92.66 // p13.2"]
["11761699_at",-0.0043537617,0.03168869,-0.25160646,0.06589937,-0.14811683,0.0043537617,0.8712118,0.6786792,-1.0344061,-0.04880264,1.0344061,"down","MAD2L1",4085,"0000070 // mitotic sister chromatid segregation // inferred from electronic annotation /// 0000075 // cell cycle checkpoint // traceable author statement /// 0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007093 // mitotic cell cycle checkpoint // inferred from direct assay /// 0007094 // mitotic cell cycle spindle assembly checkpoint // traceable author statement /// 0007094 // mitotic cell cycle spindle assembly checkpoint // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0042177 // negative regulation of protein catabolic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0060564 // negative regulation of mitotic anaphase-promoting complex activity // inferred from direct assay /// 0090267 // positive regulation of mitotic cell cycle spindle assembly checkpoint // inferred from mutant phenotype /// 0090267 // positive regulation of mitotic cell cycle spindle assembly checkpoint // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0000922 // spindle pole // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction","chr4:120980668-120987922 (-) // 84.01 // q27"]
["11735356_a_at",0.050067425,-0.083483696,0.007232666,-0.007232666,0.012054443,-0.11403036,0.8542577,0.6445802,1.019368,0.027675044,1.019368,"up","HTR4",3360,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007187 // G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger // traceable author statement /// 0007210 // serotonin receptor signaling pathway // inferred from direct assay /// 0007210 // serotonin receptor signaling pathway // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004993 // serotonin receptor activity // inferred from direct assay /// 0004993 // serotonin receptor activity // traceable author statement","chr5:147861098-148033741 (-) // 93.17 // q32"]
["11742295_x_at",0.00037312508,-0.09497714,0.072570324,-0.0581913,0.13905191,-0.00037312508,0.8703598,0.6763863,-1.0239702,-0.034173794,1.0239702,"down","TEX14",56155,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007094 // mitotic cell cycle spindle assembly checkpoint // inferred from sequence or structural similarity /// 0007140 // male meiosis // inferred from sequence or structural similarity /// 0008608 // attachment of spindle microtubules to kinetochore // inferred from sequence or structural similarity /// 0032091 // negative regulation of protein binding // inferred from electronic annotation /// 0032466 // negative regulation of cytokinesis // inferred from electronic annotation /// 0043063 // intercellular bridge organization // inferred from sequence or structural similarity /// 0051301 // cell division // inferred from electronic annotation /// 0051306 // mitotic sister chromatid separation // inferred from sequence or structural similarity","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from sequence or structural similarity /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005623 // cell // inferred from sequence or structural similarity /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030496 // midbody // inferred from sequence or structural similarity /// 0030496 // midbody // inferred from electronic annotation /// 0045171 // intercellular bridge // inferred from sequence or structural similarity /// 0045171 // intercellular bridge // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction","chr17:56737937-56769392 (-) // 94.5 // q22"]
["11739912_a_at",-0.032463074,-0.049697876,-0.019184113,0.14787292,0.05442047,0.019184113,0.2626974,0.052374613,-1.07744,-0.10760756,1.07744,"down","TSEN15",116461,"0006397 // mRNA processing // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation","0004519 // endonuclease activity // inferred from electronic annotation","chr1:184020810-184043342 (+) // 87.93 // q25.3"]
["11761194_at",-0.0012516975,0.0012516975,-0.108692646,-0.37366247,0.03567195,0.13130832,0.9450507,0.8473136,1.0228987,0.03266324,1.0228987,"up","TGOLN2",10618,"","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030133 // transport vesicle // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr2:85551366-85555093 (-) // 61.38 // p11.2"]
["11733948_at",0.011725903,-0.023666859,0.078009605,0.02585888,-0.01371479,-0.011725903,0.79408514,0.537171,1.0152841,0.021883428,1.0152841,"up","PAX9",5083,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // non-traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007492 // endoderm development // inferred from electronic annotation /// 0042476 // odontogenesis // inferred from electronic annotation /// 0042481 // regulation of odontogenesis // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0060325 // face morphogenesis // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr14:37126772-37147012 (+) // 99.46 // q13.3"]
["11733440_a_at",-0.19315481,0.023545742,-0.023545265,-0.036482334,0.11694431,0.2447052,0.47760615,0.1738701,-1.1272237,-0.17277388,1.1272237,"down","TH",7054,"0001666 // response to hypoxia // inferred from direct assay /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001963 // synaptic transmission, dopaminergic // inferred from sequence or structural similarity /// 0001963 // synaptic transmission, dopaminergic // inferred from electronic annotation /// 0001975 // response to amphetamine // inferred from electronic annotation /// 0003007 // heart morphogenesis // non-traceable author statement /// 0006585 // dopamine biosynthetic process from tyrosine // non-traceable author statement /// 0006585 // dopamine biosynthetic process from tyrosine // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0007507 // heart development // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from electronic annotation /// 0007601 // visual perception // inferred from sequence or structural similarity /// 0007601 // visual perception // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0007612 // learning // inferred from sequence or structural similarity /// 0007612 // learning // inferred from electronic annotation /// 0007613 // memory // inferred from sequence or structural similarity /// 0007613 // memory // inferred from electronic annotation /// 0007617 // mating behavior // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from sequence or structural similarity /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0008016 // regulation of heart contraction // inferred from sequence or structural similarity /// 0008016 // regulation of heart contraction // inferred from electronic annotation /// 0009072 // aromatic amino acid family metabolic process // inferred from electronic annotation /// 0009414 // response to water deprivation // inferred from electronic annotation /// 0009416 // response to light stimulus // inferred from electronic annotation /// 0009635 // response to herbicide // inferred from electronic annotation /// 0009651 // response to salt stress // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0009887 // organ morphogenesis // inferred from sequence or structural similarity /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010038 // response to metal ion // inferred from electronic annotation /// 0010043 // response to zinc ion // inferred from electronic annotation /// 0010259 // multicellular organismal aging // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0015842 // synaptic vesicle amine transport // inferred from electronic annotation /// 0017085 // response to insecticide // inferred from electronic annotation /// 0018963 // phthalate metabolic process // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0033076 // isoquinoline alkaloid metabolic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0035094 // response to nicotine // inferred from electronic annotation /// 0035176 // social behavior // inferred from electronic annotation /// 0035690 // cellular response to drug // inferred from electronic annotation /// 0042136 // neurotransmitter biosynthetic process // inferred from electronic annotation /// 0042214 // terpene metabolic process // inferred from electronic annotation /// 0042416 // dopamine biosynthetic process // inferred from direct assay /// 0042416 // dopamine biosynthetic process // inferred from electronic annotation /// 0042418 // epinephrine biosynthetic process // inferred from direct assay /// 0042421 // norepinephrine biosynthetic process // inferred from direct assay /// 0042423 // catecholamine biosynthetic process // traceable author statement /// 0042423 // catecholamine biosynthetic process // inferred from electronic annotation /// 0042462 // eye photoreceptor cell development // inferred from sequence or structural similarity /// 0042462 // eye photoreceptor cell development // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042745 // circadian sleep/wake cycle // inferred from electronic annotation /// 0042755 // eating behavior // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0043473 // pigmentation // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045471 // response to ethanol // inferred from direct assay /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045472 // response to ether // inferred from electronic annotation /// 0046684 // response to pyrethroid // inferred from electronic annotation /// 0048545 // response to steroid hormone stimulus // inferred from electronic annotation /// 0048596 // embryonic camera-type eye morphogenesis // inferred from sequence or structural similarity /// 0048596 // embryonic camera-type eye morphogenesis // inferred from electronic annotation /// 0050890 // cognition // inferred from electronic annotation /// 0051412 // response to corticosterone stimulus // inferred from electronic annotation /// 0051602 // response to electrical stimulus // inferred from electronic annotation /// 0052314 // phytoalexin metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070848 // response to growth factor stimulus // inferred from electronic annotation /// 0071287 // cellular response to manganese ion // inferred from electronic annotation /// 0071312 // cellular response to alkaloid // inferred from electronic annotation /// 0071316 // cellular response to nicotine // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005790 // smooth endoplasmic reticulum // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0009898 // internal side of plasma membrane // inferred from direct assay /// 0019717 // synaptosome // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from direct assay /// 0033162 // melanosome membrane // inferred from direct assay /// 0043005 // neuron projection // inferred from direct assay /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043195 // terminal button // inferred from electronic annotation /// 0043204 // perikaryon // inferred from sequence or structural similarity /// 0043204 // perikaryon // inferred from electronic annotation","0004497 // monooxygenase activity // inferred from electronic annotation /// 0004511 // tyrosine 3-monooxygenase activity // inferred from direct assay /// 0004511 // tyrosine 3-monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008198 // ferrous iron binding // inferred from electronic annotation /// 0008199 // ferric iron binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016714 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen // inferred from electronic annotation /// 0019825 // oxygen binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0034617 // tetrahydrobiopterin binding // inferred from electronic annotation /// 0035240 // dopamine binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:2185158-2193035 (-) // 98.91 // p15.5"]
["11743729_at",-0.33016682,0.05779457,-0.05779457,-0.3036623,0.11975479,0.09746933,0.8693291,0.67397875,-1.057929,-0.08124286,1.057929,"down","CCDC47",57003,"0006983 // ER overload response // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0055074 // calcium ion homeostasis // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr17:61822614-61851135 (-) // 95.13 // q23.3"]
["11743557_a_at",0.040256977,-0.10470629,-0.40257645,0.026186943,-0.02422142,0.024221897,0.5987167,0.27901825,-1.1207033,-0.16440444,1.1207033,"down","PPP1R3F",89801,"0005979 // regulation of glycogen biosynthetic process // inferred from direct assay /// 2000465 // regulation of glycogen (starch) synthase activity // inferred from direct assay","0005624 // membrane fraction // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0019903 // protein phosphatase binding // inferred from physical interaction /// 2001069 // glycogen binding // inferred from direct assay","chrX:49126316-49144077 (+) // 94.56 // p11.23"]
["11724388_at",-0.033441544,-0.015826225,-0.021744728,0.036598206,0.17063665,0.015826225,0.38988313,0.11490877,-1.0703069,-0.09802453,1.0703069,"down","ZNF721",170960,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:433191-493442 (-) // 91.78 // p16.3"]
["11729534_a_at",0.10290527,0.02004528,-0.02004528,0.10264397,-0.1507349,-0.16158962,0.64508724,0.32804832,1.0748947,0.10419529,1.0748947,"up","BRE",9577,"0006281 // DNA repair // inferred from electronic annotation /// 0006302 // double-strand break repair // inferred from mutant phenotype /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from expression pattern /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0010212 // response to ionizing radiation // inferred from mutant phenotype /// 0016568 // chromatin modification // inferred from electronic annotation /// 0031572 // G2/M transition DNA damage checkpoint // inferred from mutant phenotype /// 0045739 // positive regulation of DNA repair // inferred from mutant phenotype /// 0045768 // positive regulation of anti-apoptosis // inferred from direct assay","0000152 // nuclear ubiquitin ligase complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0070531 // BRCA1-A complex // inferred from direct assay /// 0070552 // BRISC complex // inferred from direct assay","0000268 // peroxisome targeting sequence binding // traceable author statement /// 0005164 // tumor necrosis factor receptor binding // inferred from direct assay /// 0005164 // tumor necrosis factor receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031593 // polyubiquitin binding // inferred from direct assay","chr2:28113556-28561765 (+) // 98.63 // p23.2"]
["11729299_a_at",-0.3853507,-0.064834595,-0.22590113,0.064834595,0.14692402,0.36485147,0.20403516,0.031570893,-1.3356718,-0.41756552,1.3356718,"down","SDE2",163859,"","","","chr1:226170852-226187178 (-) // 40.65 // q42.12"]
["11749673_x_at",-0.20014954,0.028374672,0.04763317,0.002913475,-0.002913475,-0.017332077,0.8711786,0.6785941,-1.0249853,-0.035603236,1.0249853,"down","CTNNA1",1495,"0001541 // ovarian follicle development // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0007406 // negative regulation of neuroblast proliferation // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016264 // gap junction assembly // inferred from electronic annotation /// 0031103 // axon regeneration // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042692 // muscle cell differentiation // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043297 // apical junction assembly // inferred from electronic annotation /// 0043297 // apical junction assembly // non-traceable author statement /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0045216 // cell-cell junction organization // traceable author statement /// 0045880 // positive regulation of smoothened signaling pathway // inferred from electronic annotation /// 0051149 // positive regulation of muscle cell differentiation // traceable author statement /// 0071681 // cellular response to indole-3-methanol // inferred from direct assay","0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0005915 // zonula adherens // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016342 // catenin complex // inferred from direct assay /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from physical interaction /// 0017166 // vinculin binding // inferred from physical interaction /// 0045295 // gamma-catenin binding // inferred from physical interaction /// 0045296 // cadherin binding // inferred from electronic annotation /// 0045296 // cadherin binding // inferred from physical interaction /// 0051015 // actin filament binding // inferred from electronic annotation","chr5:138211341-138270717 (+) // 98.82 // q31.2"]
["11756640_a_at",0.10351658,-0.005794525,0.005795002,-0.123986244,-0.09171152,0.011723995,0.4126077,0.12862301,1.0736301,0.10249702,1.0736301,"up","LRWD1 /// MIR4467","100616367 /// 222229","0000080 // G1 phase of mitotic cell cycle // inferred from mutant phenotype /// 0006260 // DNA replication // inferred from electronic annotation /// 0006270 // DNA-dependent DNA replication initiation // traceable author statement /// 0006325 // chromatin organization // inferred from mutant phenotype /// 0016568 // chromatin modification // inferred from electronic annotation /// 0071169 // establishment of protein localization to chromatin // inferred from direct assay","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000781 // chromosome, telomeric region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005664 // nuclear origin of replication recognition complex // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005721 // centromeric heterochromatin // inferred from direct assay /// 0031933 // telomeric heterochromatin // inferred from direct assay","0003682 // chromatin binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008327 // methyl-CpG binding // inferred from direct assay /// 0035064 // methylated histone residue binding // inferred from direct assay","chr7:102105402-102113582 (+) // 99.4 // q22.1"]
["11752827_a_at",0.38036394,0.10174847,0.11784315,-0.10675287,-0.10174847,-0.13033962,0.1855749,0.026084555,1.2422299,0.31293225,1.2422299,"up","PXN",5829,"0000187 // activation of MAPK activity // inferred from electronic annotation /// 0006928 // cellular component movement // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007172 // signal complex assembly // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0030032 // lamellipodium assembly // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement /// 0034614 // cellular response to reactive oxygen species // inferred from expression pattern /// 0048041 // focal adhesion assembly // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from electronic annotation /// 0060396 // growth hormone receptor signaling pathway // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005875 // microtubule associated complex // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from direct assay /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0017166 // vinculin binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051435 // BH4 domain binding // inferred from electronic annotation","chr12:120649842-120703495 (-) // 99.87 // q24.23"]
["11729730_at",-0.17201042,0.026737452,0.10304022,-0.026737213,-0.07515001,0.072184086,0.9886276,0.966238,-1.0028992,-0.004176567,1.0028992,"down","TPD52L3",89882,"","","","chr9:6328343-6330670 (+) // 99.4 // p24.1"]
["11721710_a_at",0.1219511,-0.12641573,-0.1219511,0.13923216,0.1447773,-0.1501913,0.7922578,0.5332159,-1.0619712,-0.08674462,1.0619712,"down","SHROOM3",57619,"0000902 // cell morphogenesis // inferred from sequence or structural similarity /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001843 // neural tube closure // inferred from electronic annotation /// 0002066 // columnar/cuboidal epithelial cell development // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from sequence or structural similarity /// 0007389 // pattern specification process // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0043482 // cellular pigment accumulation // inferred from sequence or structural similarity /// 0045176 // apical protein localization // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from sequence or structural similarity /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005912 // adherens junction // inferred from sequence or structural similarity /// 0005912 // adherens junction // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from sequence or structural similarity /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043296 // apical junction complex // inferred from sequence or structural similarity /// 0043296 // apical junction complex // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation","chr4:77356194-77704402 (+) // 94.99 // q21.1"]
["11718946_at",0.2720256,0.026494503,-0.09653568,0.14124537,-0.026494503,-0.20724916,0.79772663,0.54307425,1.0704081,0.098160945,1.0704081,"up","PGPEP1",54858,"0006508 // proteolysis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr19:18451396-18480759 (+) // 72.11 // p13.11"]
["11733603_a_at",-0.17492437,0.08938074,-0.0626843,0,0,0.05295992,0.73214847,0.44159195,-1.0475816,-0.06706256,1.0475816,"down","SLC52A1",55065,"0006810 // transport // inferred from electronic annotation /// 0032218 // riboflavin transport // inferred from direct assay","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0032217 // riboflavin transporter activity // inferred from direct assay","chr17:4935897-4938721 (-) // 85.69 // p13.2"]
["11757219_at",-0.27437496,0.07591152,0.18169498,-0.407835,-0.015574455,0.015574455,0.79440063,0.5380277,1.0945634,0.13035548,1.0945634,"up","LINC00473",90632,"0006351 // transcription, DNA-dependent // inferred from mutant phenotype","","","chr6:166337535-166401527 (-) // 97.06 // q27"]
["11737539_a_at",-0.13889027,-0.022698402,-0.20604801,0.025513649,0.022697926,0.09024811,0.23936634,0.043568335,-1.1240442,-0.16869874,1.1240442,"down","PVR",5817,"0002860 // positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target // inferred from mutant phenotype /// 0007155 // cell adhesion // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0042271 // susceptibility to natural killer cell mediated cytotoxicity // inferred from mutant phenotype /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045216 // cell-cell junction organization // traceable author statement /// 0045954 // positive regulation of natural killer cell mediated cytotoxicity // inferred from mutant phenotype /// 0050776 // regulation of immune response // traceable author statement /// 0060370 // susceptibility to T cell mediated cytotoxicity // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0030054 // cell junction // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0004872 // receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0050839 // cell adhesion molecule binding // inferred from physical interaction","chr19:45147097-45162362 (+) // 91.85 // q13.31"]
["11737550_at",-0.17016888,0.17302132,0.045741796,-0.076254606,-0.013109207,0.013109446,0.8856757,0.7084868,1.0292662,0.04161621,1.0292662,"up","LHFPL5",222662,"0007605 // sensory perception of sound // inferred from electronic annotation /// 0060088 // auditory receptor cell stereocilium organization // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation","","chr6:35773069-35791852 (+) // 81.93 // p21.31"]
["11734764_at",0.12895727,-0.20873594,-0.055719614,0.055719376,-0.33728123,0.1561451,0.99471503,0.985955,-1.0023321,-0.0033605795,1.0023321,"down","FGFR1",2260,"0000165 // MAPK cascade // traceable author statement /// 0001501 // skeletal system development // traceable author statement /// 0001764 // neuron migration // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from genetic interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from physical interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0010518 // positive regulation of phospholipase activity // traceable author statement /// 0010863 // positive regulation of phospholipase C activity // inferred from direct assay /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // traceable author statement /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0043009 // chordate embryonic development // traceable author statement /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0043410 // positive regulation of MAPK cascade // inferred from mutant phenotype /// 0045595 // regulation of cell differentiation // traceable author statement /// 0045666 // positive regulation of neuron differentiation // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048705 // skeletal system morphogenesis // traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from direct assay /// 0005007 // fibroblast growth factor-activated receptor activity // traceable author statement /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from direct assay /// 0008201 // heparin binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017134 // fibroblast growth factor binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction","chr8:38280853-38326352 (-) // 86.53 // p11.23"]
["11726050_a_at",0.21552038,-0.0488019,-0.0147771835,0.24339914,0.0147771835,-0.036756992,0.94845814,0.85589266,-1.0161824,-0.023159415,1.0161824,"down","FAM108C1",58489,"","","0016787 // hydrolase activity // inferred from electronic annotation","chr15:80987451-81047962 (+) // 86.16 // q25.1"]
["11747112_x_at",-0.12792492,0.036280155,-0.07794905,0.26247358,0.0086603165,-0.0086603165,0.5407829,0.22401242,-1.1049817,-0.14402242,1.1049817,"down","ZNF766",90321,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:52785363-52795492 (+) // 53.27 // q13.41"]
["11737193_at",0.0122561455,-0.0122561455,-0.14653969,0.102837086,0.034395695,-0.06075573,0.65463,0.33856562,-1.0528785,-0.07433896,1.0528785,"down","UTS2D",257313,"","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation","0005179 // hormone activity // inferred from electronic annotation","chr3:190984944-191048325 (-) // 43.87 // q28"]
["11718615_a_at",0.22943306,-0.0076055527,0.0076055527,0.21779251,-0.12784004,-0.26191807,0.7419523,0.455613,1.0971795,0.13379961,1.0971795,"up","RABEP1",9135,"0006810 // transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0006897 // endocytosis // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006944 // cellular membrane fusion // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005769 // early endosome // traceable author statement /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction","chr17:5185557-5289130 (+) // 98.3 // p13.2"]
["11719599_a_at",-0.100245714,0.003911972,-0.003911972,-0.037179947,0.009789467,0.038767338,0.70704556,0.40643734,-1.0261258,-0.037207596,1.0261258,"down","HOMER2",9455,"0007216 // G-protein coupled glutamate receptor signaling pathway // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0030160 // GKAP/Homer scaffold activity // inferred from electronic annotation /// 0035256 // G-protein coupled glutamate receptor binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr15:83517734-83621476 (-) // 93.02 // q25.2"]
["11736069_at",-0.144912,0.12472367,-0.05512047,0.20402026,-0.010882139,0.010882139,0.71914345,0.42382398,-1.0666668,-0.09310964,1.0666668,"down","JMJD6",23210,"0001568 // blood vessel development // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0002040 // sprouting angiogenesis // inferred from sequence or structural similarity /// 0002040 // sprouting angiogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0018395 // peptidyl-lysine hydroxylation to 5-hydroxy-L-lysine // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0042116 // macrophage activation // inferred from electronic annotation /// 0043277 // apoptotic cell clearance // inferred from electronic annotation /// 0043654 // recognition of apoptotic cell // inferred from electronic annotation /// 0048024 // regulation of nuclear mRNA splicing, via spliceosome // inferred from mutant phenotype /// 0048024 // regulation of nuclear mRNA splicing, via spliceosome // inferred from electronic annotation /// 0048821 // erythrocyte development // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060041 // retina development in camera-type eye // inferred from electronic annotation /// 0070078 // histone H3-R2 demethylation // inferred from direct assay /// 0070079 // histone H4-R3 demethylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation","0003723 // RNA binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003727 // single-stranded RNA binding // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0033746 // histone demethylase activity (H3-R2 specific) // inferred from direct assay /// 0033749 // histone demethylase activity (H4-R3 specific) // inferred from direct assay /// 0042802 // identical protein binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070815 // peptidyl-lysine 5-dioxygenase activity // inferred from direct assay","chr17:74708913-74722881 (-) // 91.59 // q25.1"]
["11741701_x_at",0.10980129,0.5463824,0.4150877,-0.10980129,-0.23968077,-0.4240203,0.15301618,0.01774424,1.5314779,0.61492455,1.5314779,"up","HIST1H2BJ",8970,"0006334 // nucleosome assembly // non-traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation","0000786 // nucleosome // non-traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr6:27099769-27100575 (-) // 99.5 // p22.1"]
["11742054_a_at",0.18914318,0.058400154,0.25747967,-0.3163886,-0.058400154,-0.15887022,0.17028205,0.021966575,1.271232,0.34622735,1.271232,"up","ANO6",196527,"0002543 // activation of blood coagulation via clotting cascade // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from electronic annotation /// 0097045 // phosphatidylserine exposure on blood platelet // inferred from mutant phenotype","0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0034707 // chloride channel complex // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from electronic annotation","chr12:45609875-45834187 (+) // 83.5 // q12"]
["11756336_s_at",0.091591835,-0.115608215,0.025167465,-0.05020237,0.036723614,-0.025167465,0.94664353,0.85122216,1.0092375,0.013265758,1.0092375,"up","ZNF23",7571,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:71481521-71490733 (-) // 85.7 // q22.2"]
["11750315_x_at",-0.29181004,-0.071572304,0.21578026,0.011369228,0.07320356,-0.0113687515,0.8555188,0.64746034,-1.0523409,-0.07360209,1.0523409,"down","ZNF429",353088,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:21688462-21720725 (+) // 97.58 // p12"]
["11718910_s_at",0.35401487,0.0942626,-0.02481842,0.024817944,-0.035605907,-0.051638126,0.546554,0.22924875,1.1188074,0.16196175,1.1188074,"up","OTUD5",55593,"0006508 // proteolysis // inferred from electronic annotation /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0032496 // response to lipopolysaccharide // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0070536 // protein K63-linked deubiquitination // inferred from direct assay /// 0071108 // protein K48-linked deubiquitination // inferred from direct assay","0005829 // cytosol // traceable author statement","0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chrX:48779304-48815138 (-) // 90.93 // p11.23"]
["11723004_x_at",-0.2501526,-0.015571594,0.015572071,-0.20802116,0.2206111,0.18784618,0.7055961,0.40439013,-1.1097202,-0.150196,1.1097202,"down","F2",2147,"0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0006508 // proteolysis // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006953 // acute-phase response // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from direct assay /// 0007275 // multicellular organismal development // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007596 // blood coagulation // inferred from electronic annotation /// 0007597 // blood coagulation, intrinsic pathway // traceable author statement /// 0007599 // hemostasis // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0009611 // response to wounding // inferred from direct assay /// 0010544 // negative regulation of platelet activation // traceable author statement /// 0017187 // peptidyl-glutamic acid carboxylation // traceable author statement /// 0030168 // platelet activation // inferred from direct assay /// 0030168 // platelet activation // traceable author statement /// 0030168 // platelet activation // inferred from electronic annotation /// 0030193 // regulation of blood coagulation // traceable author statement /// 0030194 // positive regulation of blood coagulation // inferred from direct assay /// 0030307 // positive regulation of cell growth // inferred from electronic annotation /// 0032967 // positive regulation of collagen biosynthetic process // inferred from direct assay /// 0042730 // fibrinolysis // inferred from direct assay /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045861 // negative regulation of proteolysis // inferred from direct assay /// 0048712 // negative regulation of astrocyte differentiation // inferred from direct assay /// 0050900 // leukocyte migration // traceable author statement /// 0051281 // positive regulation of release of sequestered calcium ion into cytosol // inferred from direct assay /// 0051480 // cytosolic calcium ion homeostasis // inferred from direct assay /// 0051918 // negative regulation of fibrinolysis // traceable author statement /// 1900738 // positive regulation of phospholipase C-activating G-protein coupled receptor signaling pathway // inferred from direct assay /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from direct assay","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005625 // soluble fraction // traceable author statement /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005796 // Golgi lumen // traceable author statement /// 0005886 // plasma membrane // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from direct assay /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0070053 // thrombospondin receptor activity // inferred from direct assay","chr11:46740715-46761056 (+) // 96.95 // p11.2"]
["11740268_at",0.10285425,-0.018536568,0.124946594,-0.16166306,0.018536568,-0.29315996,0.36298767,0.09956716,1.1608516,0.21518354,1.1608516,"up","CCDC18",343099,"","","","chr1:93645919-93744266 (+) // 97.13 // p22.1"]
["11760809_at",-0.28109264,-0.08459616,0.21435928,-0.18398929,0.08459616,0.50264645,0.7680356,0.4946401,-1.1367074,-0.18486097,1.1367074,"down","CACYBP",27101,"0007507 // heart development // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0060416 // response to growth hormone stimulus // inferred from electronic annotation /// 0060548 // negative regulation of cell death // inferred from electronic annotation /// 0071277 // cellular response to calcium ion // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005641 // nuclear envelope lumen // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030877 // beta-catenin destruction complex // inferred from direct assay /// 0043005 // neuron projection // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction","chr1:174968570-174974541 (+) // 83.81 // q25.1"]
["11735211_at",0.24990845,-0.007217884,-0.46203423,0.08167124,-0.12950563,0.007217884,0.924228,0.79738706,-1.0421592,-0.05957568,1.0421592,"down","STYK1",55359,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr12:10771537-10826914 (-) // 90.93 // p13.2"]
["11761613_at",0.12692523,-0.16565394,-0.15140438,0.036886454,-0.036886692,0.13700914,0.6788526,0.36876148,-1.0785158,-0.10904727,1.0785158,"down","SHANK2-AS3",220070,"","","","chr11:70708897-70711184 (+) // 45.36 // q13.4"]
["11715909_s_at",-0.29630327,-0.09885645,0.086462975,-0.08646345,0.23431063,0.18260479,0.5418322,0.22511199,-1.1591358,-0.21304962,1.1591358,"down","MYO6",4646,"0006605 // protein targeting // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from sequence or structural similarity /// 0006897 // endocytosis // inferred from mutant phenotype /// 0006897 // endocytosis // inferred from sequence or structural similarity /// 0006897 // endocytosis // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007416 // synapse assembly // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from direct assay /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0014047 // glutamate secretion // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016358 // dendrite development // inferred from electronic annotation /// 0030048 // actin filament-based movement // inferred from sequence or structural similarity /// 0030048 // actin filament-based movement // non-traceable author statement /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from direct assay /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0042491 // auditory receptor cell differentiation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0051046 // regulation of secretion // inferred from mutant phenotype /// 0071257 // cellular response to electrical stimulus // inferred from electronic annotation","0001726 // ruffle // inferred from direct assay /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005902 // microvillus // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0005938 // cell cortex // inferred from sequence or structural similarity /// 0012506 // vesicle membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0016459 // myosin complex // inferred from electronic annotation /// 0016461 // unconventional myosin complex // traceable author statement /// 0016461 // unconventional myosin complex // non-traceable author statement /// 0016591 // DNA-directed RNA polymerase II, holoenzyme // inferred from direct assay /// 0030139 // endocytic vesicle // inferred from sequence or structural similarity /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030665 // clathrin coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from direct assay /// 0031941 // filamentous actin // inferred from sequence or structural similarity /// 0031965 // nuclear membrane // inferred from direct assay /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation /// 0045334 // clathrin-coated endocytic vesicle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from sequence or structural similarity /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // traceable author statement /// 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from sequence or structural similarity /// 0005516 // calmodulin binding // traceable author statement /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0043531 // ADP binding // inferred from sequence or structural similarity /// 0051015 // actin filament binding // inferred from direct assay /// 0051015 // actin filament binding // inferred from sequence or structural similarity /// 0060001 // minus-end directed microfilament motor activity // non-traceable author statement","chr6:76458892-76629254 (+) // 91.39 // q14.1"]
["11747056_a_at",-0.37612295,0.13647223,0.017506123,-0.025135517,0.02609539,-0.017506123,0.872857,0.6825843,-1.0486497,-0.06853279,1.0486497,"down","ASXL1",171023,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from sequence or structural similarity /// 0035359 // negative regulation of peroxisome proliferator activated receptor signaling pathway // inferred from sequence or structural similarity /// 0035522 // monoubiquitinated histone H2A deubiquitination // inferred from direct assay /// 0045599 // negative regulation of fat cell differentiation // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0048386 // positive regulation of retinoic acid receptor signaling pathway // inferred from sequence or structural similarity /// 0048387 // negative regulation of retinoic acid receptor signaling pathway // inferred from sequence or structural similarity","0000790 // nuclear chromatin // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0035517 // PR-DUB complex // inferred from direct assay","0003713 // transcription coactivator activity // inferred from sequence or structural similarity /// 0003714 // transcription corepressor activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0042974 // retinoic acid receptor binding // inferred from sequence or structural similarity /// 0042975 // peroxisome proliferator activated receptor binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:30946161-31019395 (+) // 77.06 // q11.21"]
["11742407_at",0.010327339,-0.04286623,-0.010327339,0.010327339,0.26807547,-0.18627262,0.9060337,0.7511629,-1.0316824,-0.04499887,1.0316824,"down","NKX6-3",157848,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0000976 // transcription regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr8:41503828-41504878 (-) // 93.83 // p11.21"]
["11723619_x_at",-0.19378948,-0.026372433,-0.022124767,0.022124767,0.14765549,0.19119501,0.2742068,0.057064146,-1.1495644,-0.20108727,1.1495644,"down","SNAP91",9892,"0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0030100 // regulation of endocytosis // inferred from electronic annotation /// 0048268 // clathrin coat assembly // inferred from electronic annotation /// 0051223 // regulation of protein transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030118 // clathrin coat // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation /// 0005545 // 1-phosphatidylinositol binding // inferred from electronic annotation /// 0030276 // clathrin binding // inferred from electronic annotation","chr6:84262606-84419127 (-) // 95.19 // q14.2"]
["11729586_a_at",0.062921286,-0.062921286,0.21174002,0.2413981,-0.113999605,-0.07253575,0.8922381,0.7229305,1.0369112,0.052292418,1.0369112,"up","KLK2",3817,"0006508 // proteolysis // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement","0005576 // extracellular region // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from direct assay /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr19:51376504-51383822 (+) // 57.31 // q13.33"]
["11734838_a_at",0.17601538,-0.20917797,-0.1321063,0.1201787,-0.1201787,0.12293053,0.7941391,0.53749686,-1.0688553,-0.096066535,1.0688553,"down","ACSF3",197322,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from direct assay /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0090410 // malonate catabolic process // inferred from direct assay","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016878 // acid-thiol ligase activity // inferred from direct assay /// 0090409 // malonyl-CoA synthetase activity // inferred from direct assay","chr16:89160216-89222169 (+) // 97.54 // q24.3"]
["11717370_at",-0.035426617,0.035426617,-0.056164265,0.13883543,-0.06663275,0.23666811,0.5832267,0.2633567,-1.0879998,-0.121678315,1.0879998,"down","ARSD",414,"0008152 // metabolic process // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004065 // arylsulfatase activity // traceable author statement /// 0008484 // sulfuric ester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:2822020-2843810 (-) // 76.52 // p22.33"]
["11740427_at",0.053396225,-0.02733469,0.0010261536,0.06325245,-0.04906273,-0.0010261536,0.9690813,0.9136906,1.0032223,0.004641389,1.0032223,"up","PSAPL1",768239,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation","","chr4:7432021-7436700 (-) // 89.78 // p16.1"]
["11715455_x_at",-0.02102375,0.007460594,-0.007460594,0.29459715,-0.057373524,0.012434006,0.73844355,0.45010749,-1.0645378,-0.09022713,1.0645378,"down","KISS1",3814,"0007010 // cytoskeleton organization // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:204159468-204165619 (-) // 84.2 // q32.1"]
["11742891_a_at",0.17983198,0.022861004,-0.03581953,0.014825344,-0.014825344,-0.13962698,0.58951145,0.27013376,1.0733844,0.10216683,1.0733844,"up","C17orf53",78995,"","","","chr17:42219273-42239844 (+) // 97.18 // q21.31"]
["11719446_a_at",-0.084959984,0.11059189,-0.045124054,0.009019852,0.047673225,-0.009019852,0.8981903,0.7361349,-1.0156395,-0.022388471,1.0156395,"down","CPA1",1357,"0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005625 // soluble fraction // inferred from electronic annotation","0004180 // carboxypeptidase activity // inferred from electronic annotation /// 0004181 // metallocarboxypeptidase activity // inferred from electronic annotation /// 0004181 // metallocarboxypeptidase activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008238 // exopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:130020211-130027949 (+) // 91.3 // q32.2"]
["11722749_at",0.05703163,0.15372086,0.20586872,-0.15247631,-0.05703211,-0.1346693,0.10779342,0.00847707,1.192178,0.25359967,1.192178,"up","HOOK3",84376,"0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007032 // endosome organization // inferred from mutant phenotype /// 0007040 // lysosome organization // inferred from mutant phenotype /// 0008333 // endosome to lysosome transport // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0022027 // interkinetic nuclear migration // inferred from sequence or structural similarity /// 0022027 // interkinetic nuclear migration // inferred from electronic annotation /// 0031122 // cytoplasmic microtubule organization // inferred from mutant phenotype /// 0034454 // microtubule anchoring at centrosome // inferred from sequence or structural similarity /// 0034454 // microtubule anchoring at centrosome // inferred from electronic annotation /// 0045022 // early endosome to late endosome transport // inferred from mutant phenotype /// 0050768 // negative regulation of neurogenesis // inferred from sequence or structural similarity /// 0050768 // negative regulation of neurogenesis // inferred from electronic annotation /// 0051645 // Golgi localization // inferred from mutant phenotype /// 0071539 // protein localization to centrosome // inferred from sequence or structural similarity /// 0071539 // protein localization to centrosome // inferred from electronic annotation /// 0097150 // neuronal stem cell maintenance // inferred from electronic annotation","0000242 // pericentriolar material // inferred from sequence or structural similarity /// 0000242 // pericentriolar material // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005801 // cis-Golgi network // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // inferred from sequence or structural similarity /// 0005813 // centrosome // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0030897 // HOPS complex // inferred from direct assay /// 0034451 // centriolar satellite // inferred from electronic annotation /// 0070695 // FHF complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from direct assay /// 0008017 // microtubule binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction","chr8:42751951-42885682 (+) // 78.79 // p11.21"]
["11727212_a_at",-0.13696289,-0.18754864,-0.343318,0.13696289,0.2982707,0.25655413,0.07918156,0.004509317,-1.369079,-0.45320567,1.369079,"down","DTWD1",56986,"","","","chr15:49913225-49937338 (+) // 62.29 // q21.2"]
["11722240_a_at",0.42344236,-0.01010704,-0.058736324,0.12184048,0.01010704,-0.20598698,0.7537354,0.4739664,1.1041067,0.14287955,1.1041067,"up","SAV1",60485,"0001942 // hair follicle development // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from electronic annotation /// 0035329 // hippo signaling cascade // inferred from sequence or structural similarity /// 0035329 // hippo signaling cascade // traceable author statement /// 0035329 // hippo signaling cascade // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0046620 // regulation of organ growth // inferred from electronic annotation /// 0050680 // negative regulation of epithelial cell proliferation // inferred from electronic annotation /// 0060044 // negative regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0060412 // ventricular septum morphogenesis // inferred from electronic annotation /// 0060487 // lung epithelial cell differentiation // inferred from electronic annotation /// 0060575 // intestinal epithelial cell differentiation // inferred from electronic annotation /// 2000036 // regulation of stem cell maintenance // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr14:51098916-51135548 (-) // 91.97 // q22.1"]
["11761315_at",0.000310421,-0.025532246,-0.000310421,0.41895342,-0.10697508,0.034422874,0.75438344,0.47486195,-1.0897354,-0.123977855,1.0897354,"down","ORC3",23595,"0000075 // cell cycle checkpoint // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation","0000808 // origin recognition complex // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005664 // nuclear origin of replication recognition complex // inferred from direct assay /// 0005664 // nuclear origin of replication recognition complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003688 // DNA replication origin binding // traceable author statement","chr6:88299853-88373410 (+) // 99.97 // q15"]
["11722507_a_at",0.01573658,-0.051516533,0.02915883,-0.03501153,-0.01573658,0.048315763,0.9899148,0.9704752,-1.0009683,-0.0013963392,1.0009683,"down","CLIC5",53405,"0006810 // transport // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from direct assay /// 0006821 // chloride transport // inferred from electronic annotation /// 0007565 // female pregnancy // traceable author statement /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0008104 // protein localization // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation /// 0060088 // auditory receptor cell stereocilium organization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032420 // stereocilium // inferred from electronic annotation /// 0032421 // stereocilium bundle // inferred from electronic annotation /// 0034707 // chloride channel complex // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005247 // voltage-gated chloride channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:45866187-46048085 (-) // 98.84 // p21.1"]
["11741342_a_at",-0.13489723,0.003130436,-0.003130436,-0.02097416,0.058826923,0.040982246,0.55403674,0.23561282,-1.0506222,-0.07124401,1.0506222,"down","COL9A1",1297,"0001894 // tissue homeostasis // inferred from electronic annotation /// 0002062 // chondrocyte differentiation // inferred from electronic annotation /// 0003417 // growth plate cartilage development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0009887 // organ morphogenesis // traceable author statement /// 0051216 // cartilage development // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005594 // collagen type IX // inferred from direct assay /// 0005594 // collagen type IX // traceable author statement","0030020 // extracellular matrix structural constituent conferring tensile strength // inferred by curator /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:70925743-70992912 (-) // 98.51 // q13"]
["11725807_a_at",0.0055618286,-0.10106897,0.01444006,-0.021326542,-0.0055618286,0.04360199,0.7586427,0.4805428,-1.0228493,-0.032593634,1.0228493,"down","SNCAIP",9627,"0008219 // cell death // inferred from electronic annotation /// 0042417 // dopamine metabolic process // inferred from direct assay /// 0046928 // regulation of neurotransmitter secretion // inferred from direct assay /// 0090083 // regulation of inclusion body assembly // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0042734 // presynaptic membrane // non-traceable author statement /// 0043025 // neuronal cell body // non-traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr5:121647792-121799914 (+) // 97.31 // q23.2"]
["11763049_x_at",-0.12079573,0.053032637,0.023905039,0.11173248,-0.023905039,-0.06347799,0.916323,0.7783783,-1.0158842,-0.022735903,1.0158842,"down","LOC646813",646813,"0034605 // cellular response to heat // inferred from electronic annotation","0005730 // nucleolus // inferred from electronic annotation","","chr11:50368317-50379802 (+) // 94.24 // p11.12"]
["11760440_at",0.14271855,-0.17353344,-0.016124249,0.031650543,-0.2744422,0.01612401,0.8718721,0.6803056,1.0424004,0.059909485,1.0424004,"up","TESK2",10420,"0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from sequence or structural similarity /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007283 // spermatogenesis // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from sequence or structural similarity /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0048041 // focal adhesion assembly // inferred from sequence or structural similarity /// 0048041 // focal adhesion assembly // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from sequence or structural similarity /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004712 // protein serine/threonine/tyrosine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:45864143-45956841 (-) // 67.54 // p34.1"]
["11734598_x_at",0.022644997,0.031933308,0.03457594,-0.55144453,-0.09896994,-0.022644997,0.5097685,0.19858053,1.1925677,0.25407118,1.1925677,"up","SLC25A52",147407,"0006810 // transport // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr18:29339524-29340843 (-) // 98.94 // q12.1"]
["11738154_at",-0.05648327,-0.11203241,-0.30739164,0.05648327,0.16877699,0.25923586,0.19536121,0.029037021,-1.248447,-0.3201345,1.248447,"down","ZNF843",283933,"","0005622 // intracellular // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:31446758-31454348 (-) // 88.5 // p11.2"]
["11731198_at",-0.0050108433,0,-0.011246681,0.011246681,0.005010605,0,0.32079822,0.07801252,-1.0075408,-0.010838293,1.0075408,"down","LHFPL3",375612,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr7:103969103-104549005 (+) // 95.8 // q22.2"]
["11754808_s_at",0.113156796,-0.05504942,0.05999565,-0.081961155,-0.08394909,0.05504942,0.63992643,0.32251978,1.0543262,0.07632126,1.0543262,"up","CPAMD8",27151,"0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004866 // endopeptidase inhibitor activity // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr19:17003768-17007752 (-) // 92.49 // p13.11"]
["11728873_s_at",-0.2613201,0.011852264,0.022439003,-0.11568165,-0.011852264,0.02354908,0.8854419,0.70772946,-1.0288372,-0.041014716,1.0288372,"down","RBM24",221662,"0010830 // regulation of myotube differentiation // inferred from sequence or structural similarity /// 0010830 // regulation of myotube differentiation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0043488 // regulation of mRNA stability // inferred from sequence or structural similarity /// 0043488 // regulation of mRNA stability // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003730 // mRNA 3'-UTR binding // inferred from sequence or structural similarity /// 0003730 // mRNA 3'-UTR binding // inferred from electronic annotation","chr6:17281268-17294165 (+) // 92.0 // p22.3"]
["11716961_x_at",0.38584328,0.058509827,-0.058509827,0.24611378,-0.12247944,-0.05920124,0.81551456,0.5735306,1.0770885,0.10713676,1.0770885,"up","FAM3A",60343,"","0005576 // extracellular region // inferred from electronic annotation","","chrX:153734506-153744561 (-) // 96.5 // q28"]
["11761197_x_at",-0.056628942,0.05662918,-0.19125462,-0.111035585,0.08344102,0.12348342,0.7028674,0.40066352,-1.0685945,-0.095714435,1.0685945,"down","SLC43A2",124935,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006865 // amino acid transport // traceable author statement /// 0006865 // amino acid transport // inferred from electronic annotation /// 0015807 // L-amino acid transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0015179 // L-amino acid transmembrane transporter activity // inferred from electronic annotation","chr17:1488554-1532175 (-) // 77.32 // p13.3"]
["11754910_x_at",0.2520566,0.15750837,-0.025643826,0.025644302,-0.314898,-0.22702074,0.33158404,0.08319977,1.2312001,0.30006525,1.2312001,"up","MICALL2",79778,"0006897 // endocytosis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005923 // tight junction // inferred from electronic annotation /// 0032432 // actin filament bundle // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:1473994-1481160 (-) // 92.5 // p22.3"]
["11720682_at",-0.26199532,-0.0440197,-0.004655838,0.033802032,0.026420593,0.004655838,0.5048734,0.19493516,-1.0906461,-0.1251831,1.0906461,"down","TIFA",92610,"0007249 // I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation","","0005515 // protein binding // inferred from physical interaction","chr4:113196445-113207071 (-) // 83.94 // q25"]
["11741949_a_at",0.14743948,-0.07878351,-0.12667131,0.2243309,0.02954197,-0.02954197,0.7419523,0.4559413,-1.0674107,-0.094115384,1.0674107,"down","NF1",4763,"0000165 // MAPK cascade // inferred from sequence or structural similarity /// 0000165 // MAPK cascade // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from sequence or structural similarity /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001656 // metanephros development // inferred from sequence or structural similarity /// 0001656 // metanephros development // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from sequence or structural similarity /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001889 // liver development // inferred from sequence or structural similarity /// 0001889 // liver development // inferred from electronic annotation /// 0001937 // negative regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001937 // negative regulation of endothelial cell proliferation // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // inferred from electronic annotation /// 0001952 // regulation of cell-matrix adhesion // inferred from sequence or structural similarity /// 0001952 // regulation of cell-matrix adhesion // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // inferred from sequence or structural similarity /// 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0007154 // cell communication // inferred from sequence or structural similarity /// 0007154 // cell communication // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // inferred from sequence or structural similarity /// 0007265 // Ras protein signal transduction // inferred from electronic annotation /// 0007406 // negative regulation of neuroblast proliferation // inferred from sequence or structural similarity /// 0007406 // negative regulation of neuroblast proliferation // inferred from electronic annotation /// 0007420 // brain development // inferred from sequence or structural similarity /// 0007420 // brain development // inferred from electronic annotation /// 0007422 // peripheral nervous system development // inferred from sequence or structural similarity /// 0007422 // peripheral nervous system development // inferred from electronic annotation /// 0007507 // heart development // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008542 // visual learning // inferred from sequence or structural similarity /// 0008542 // visual learning // inferred from electronic annotation /// 0014044 // Schwann cell development // inferred from sequence or structural similarity /// 0014044 // Schwann cell development // inferred from electronic annotation /// 0014065 // phosphatidylinositol 3-kinase cascade // inferred from sequence or structural similarity /// 0014065 // phosphatidylinositol 3-kinase cascade // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from electronic annotation /// 0021510 // spinal cord development // inferred from sequence or structural similarity /// 0021510 // spinal cord development // inferred from electronic annotation /// 0021897 // forebrain astrocyte development // inferred from sequence or structural similarity /// 0021897 // forebrain astrocyte development // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from sequence or structural similarity /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0022011 // myelination in peripheral nervous system // inferred from sequence or structural similarity /// 0022011 // myelination in peripheral nervous system // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from sequence or structural similarity /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from sequence or structural similarity /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030199 // collagen fibril organization // inferred from sequence or structural similarity /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0030325 // adrenal gland development // inferred from sequence or structural similarity /// 0030325 // adrenal gland development // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from mutant phenotype /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0032228 // regulation of synaptic transmission, GABAergic // inferred from electronic annotation /// 0032318 // regulation of Ras GTPase activity // inferred from mutant phenotype /// 0032320 // positive regulation of Ras GTPase activity // inferred from direct assay /// 0032320 // positive regulation of Ras GTPase activity // inferred from mutant phenotype /// 0032320 // positive regulation of Ras GTPase activity // inferred from sequence or structural similarity /// 0032320 // positive regulation of Ras GTPase activity // inferred from electronic annotation /// 0035021 // negative regulation of Rac protein signal transduction // inferred from electronic annotation /// 0042060 // wound healing // inferred from sequence or structural similarity /// 0042060 // wound healing // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042992 // negative regulation of transcription factor import into nucleus // inferred from sequence or structural similarity /// 0042992 // negative regulation of transcription factor import into nucleus // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from sequence or structural similarity /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043407 // negative regulation of MAP kinase activity // inferred from sequence or structural similarity /// 0043407 // negative regulation of MAP kinase activity // inferred from electronic annotation /// 0043409 // negative regulation of MAPK cascade // inferred from mutant phenotype /// 0043409 // negative regulation of MAPK cascade // inferred from sequence or structural similarity /// 0043409 // negative regulation of MAPK cascade // inferred from electronic annotation /// 0043473 // pigmentation // inferred from sequence or structural similarity /// 0043473 // pigmentation // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from sequence or structural similarity /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0043535 // regulation of blood vessel endothelial cell migration // inferred from mutant phenotype /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0045124 // regulation of bone resorption // inferred from sequence or structural similarity /// 0045124 // regulation of bone resorption // inferred from electronic annotation /// 0045685 // regulation of glial cell differentiation // inferred from sequence or structural similarity /// 0045685 // regulation of glial cell differentiation // inferred from electronic annotation /// 0045762 // positive regulation of adenylate cyclase activity // inferred from sequence or structural similarity /// 0045762 // positive regulation of adenylate cyclase activity // inferred from electronic annotation /// 0045765 // regulation of angiogenesis // inferred from mutant phenotype /// 0045765 // regulation of angiogenesis // inferred from electronic annotation /// 0046580 // negative regulation of Ras protein signal transduction // not recorded /// 0046580 // negative regulation of Ras protein signal transduction // inferred from electronic annotation /// 0046929 // negative regulation of neurotransmitter secretion // inferred from electronic annotation /// 0048147 // negative regulation of fibroblast proliferation // inferred from electronic annotation /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048485 // sympathetic nervous system development // inferred from sequence or structural similarity /// 0048485 // sympathetic nervous system development // inferred from electronic annotation /// 0048593 // camera-type eye morphogenesis // inferred from sequence or structural similarity /// 0048593 // camera-type eye morphogenesis // inferred from electronic annotation /// 0048712 // negative regulation of astrocyte differentiation // inferred from electronic annotation /// 0048715 // negative regulation of oligodendrocyte differentiation // inferred from sequence or structural similarity /// 0048715 // negative regulation of oligodendrocyte differentiation // inferred from electronic annotation /// 0048745 // smooth muscle tissue development // inferred from sequence or structural similarity /// 0048745 // smooth muscle tissue development // inferred from electronic annotation /// 0048844 // artery morphogenesis // inferred from sequence or structural similarity /// 0048844 // artery morphogenesis // inferred from electronic annotation /// 0048853 // forebrain morphogenesis // inferred from sequence or structural similarity /// 0048853 // forebrain morphogenesis // inferred from electronic annotation /// 0050890 // cognition // inferred from mutant phenotype /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // not recorded /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030424 // axon // inferred from direct assay /// 0030425 // dendrite // inferred from direct assay /// 0031235 // intrinsic to internal side of plasma membrane // not recorded","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005099 // Ras GTPase activator activity // inferred from direct assay /// 0005099 // Ras GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr17:29421994-29704691 (+) // 97.91 // q11.2"]
["11716297_a_at",0.6561489,0.07787323,-0.09043503,0.46989822,-0.38485622,-0.07787323,0.8095311,0.5632607,1.1584047,0.21213937,1.1584047,"up","CLPTM1",1209,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0033081 // regulation of T cell differentiation in thymus // inferred from sequence or structural similarity /// 0033081 // regulation of T cell differentiation in thymus // inferred from electronic annotation","0005887 // integral to plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from sequence or structural similarity /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr19:45465216-45496599 (+) // 93.78 // q13.32"]
["11733021_x_at",-0.07630634,-0.0040102005,0.004011154,-0.012682915,0.06498909,0.045384407,0.47042432,0.16885716,-1.0410206,-0.05799866,1.0410206,"down","LDHA",3939,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006090 // pyruvate metabolic process // traceable author statement /// 0006096 // glycolysis // non-traceable author statement /// 0006096 // glycolysis // inferred from electronic annotation /// 0006144 // purine base metabolic process // traceable author statement /// 0006188 // IMP biosynthetic process // inferred from electronic annotation /// 0006196 // AMP catabolic process // traceable author statement /// 0009117 // nucleotide metabolic process // inferred from electronic annotation /// 0009168 // purine ribonucleoside monophosphate biosynthetic process // inferred from electronic annotation /// 0031668 // cellular response to extracellular stimulus // inferred from electronic annotation /// 0032264 // IMP salvage // inferred from electronic annotation /// 0043101 // purine-containing compound salvage // traceable author statement /// 0044262 // cellular carbohydrate metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0019861 // flagellum // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003876 // AMP deaminase activity // inferred from electronic annotation /// 0003876 // AMP deaminase activity // traceable author statement /// 0004459 // L-lactate dehydrogenase activity // non-traceable author statement /// 0004459 // L-lactate dehydrogenase activity // inferred from electronic annotation /// 0004459 // L-lactate dehydrogenase activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019239 // deaminase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:18415934-18429765 (+) // 97.05 // p15.1"]
["11747327_s_at",0.0104494095,-0.01462841,0.011342049,0.20515442,-0.0104494095,-0.062885284,0.85223407,0.64080137,-1.0292206,-0.041552212,1.0292206,"down","TIMM23 /// TIMM23B","100287932 /// 653252","0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006626 // protein targeting to mitochondrion // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005744 // mitochondrial inner membrane presequence translocase complex // inferred from electronic annotation /// 0005744 // mitochondrial inner membrane presequence translocase complex // inferred from direct assay /// 0005758 // mitochondrial intermembrane space // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031305 // integral to mitochondrial inner membrane // inferred from direct assay","0004649 // poly(ADP-ribose) glycohydrolase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015450 // P-P-bond-hydrolysis-driven protein transmembrane transporter activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr10:51371376-51733237 (+) // 91.79 // q11.23"]
["11755675_a_at",-0.1689167,-0.0650692,-0.093822,0.0650692,0.12738037,0.17626667,0.095105074,0.006517475,-1.1746042,-0.23217466,1.1746042,"down","SYT2",127833,"0006810 // transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042584 // chromaffin granule membrane // inferred from electronic annotation /// 0042598 // vesicular fraction // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045202 // synapse // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005544 // calcium-dependent phospholipid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:202565205-202612581 (-) // 88.49 // q32.1"]
["11727197_a_at",-0.011720896,0.011720657,-0.34158087,0.14156199,-0.048940897,0.061410904,0.58217955,0.26232556,-1.1213249,-0.16520435,1.1213249,"down","PCDHA1 /// PCDHA10 /// PCDHA11 /// PCDHA12 /// PCDHA13 /// PCDHA2 /// PCDHA3 /// PCDHA4 /// PCDHA5 /// PCDHA6 /// PCDHA7 /// PCDHA8 /// PCDHA9 /// PCDHAC1 /// PCDHAC2","56134 /// 56135 /// 56136 /// 56137 /// 56138 /// 56139 /// 56140 /// 56141 /// 56142 /// 56143 /// 56144 /// 56145 /// 56146 /// 56147 /// 9752","0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr5:140247649-140391929 (+) // 93.16 // q31.3"]
["11750569_a_at",-0.24451733,0.00671196,-0.00671196,-0.029719353,0.05409527,0.028718948,0.62790275,0.3094196,-1.0711824,-0.09920412,1.0711824,"down","IARS",3376,"0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006428 // isoleucyl-tRNA aminoacylation // inferred from electronic annotation /// 0006450 // regulation of translational fidelity // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement","0005625 // soluble fraction // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0002161 // aminoacyl-tRNA editing activity // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004822 // isoleucine-tRNA ligase activity // inferred from electronic annotation /// 0004822 // isoleucine-tRNA ligase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation","chr9:94972625-95055977 (-) // 95.74 // q22.31"]
["11745822_x_at",-0.179986,0.23620224,0.2028532,-0.2896328,-0.020215034,0.020215034,0.6471495,0.33027267,1.135164,0.18290077,1.135164,"up","SRSF6",6431,"0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006376 // mRNA splice site selection // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0048025 // negative regulation of nuclear mRNA splicing, via spliceosome // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr20:42086504-42090199 (+) // 98.28 // q13.11"]
["11719303_a_at",0.009220123,0.013034821,-0.009220123,0.14359665,-0.02120018,-0.108618736,0.99867165,0.997499,-1.0001717,-0.00024763375,1.0001717,"down","EMC8",10328,"","0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement /// 0072546 // ER membrane protein complex // inferred from direct assay","","chr16:85812229-85833269 (-) // 96.89 // q24.1"]
["11756808_a_at",-0.44954634,-0.12774897,0.07900524,0.17568922,0.053365707,-0.053365707,0.5703209,0.25072414,-1.1685016,-0.22465973,1.1685016,"down","ZNF225",7768,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:44617569-44637027 (+) // 93.58 // q13.31"]
["11748598_a_at",-0.027493477,-0.3131919,-0.0795455,0.16756296,0.027493477,0.099888325,0.30209514,0.069323786,-1.179677,-0.2383919,1.179677,"down","LMOD1",25802,"0006936 // muscle contraction // traceable author statement","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005523 // tropomyosin binding // inferred from electronic annotation","chr1:201867410-201915676 (-) // 90.45 // q32.1"]
["11741757_a_at",0.008128166,-0.008128166,-0.045254707,-0.038219452,0.0632267,0.12916374,0.5836528,0.26380637,-1.0471551,-0.0664752,1.0471551,"down","SCARF1",8578,"0006707 // cholesterol catabolic process // inferred by curator /// 0006898 // receptor-mediated endocytosis // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0010976 // positive regulation of neuron projection development // inferred from sequence or structural similarity /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0016322 // neuron remodeling // inferred from sequence or structural similarity /// 0016322 // neuron remodeling // inferred from electronic annotation /// 0016358 // dendrite development // inferred from electronic annotation /// 0048680 // positive regulation of axon regeneration // inferred from sequence or structural similarity /// 0048680 // positive regulation of axon regeneration // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0005044 // scavenger receptor activity // inferred from direct assay /// 0030169 // low-density lipoprotein particle binding // inferred from direct assay","chr17:1537151-1549041 (-) // 85.69 // p13.3"]
["11732473_x_at",0.13636637,0.050180912,0.025352478,-0.506845,-0.03187275,-0.025352478,0.4957726,0.18758953,1.1963642,0.2586566,1.1963642,"up","CIDEC",63924,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay","","chr3:9908393-9920740 (-) // 95.73 // p25.3"]
["11763234_at",-0.005602598,-0.16548109,0.043776035,0.06535816,-0.040555716,0.00560236,0.7688568,0.49557373,-1.0371114,-0.05257087,1.0371114,"down","CCDC91",55297,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","","chr12:28410134-28726561 (+) // 88.01 // p11.22"]
["11732945_x_at",-0.119594574,-0.007361412,0.007360935,-0.24370623,0.2046566,0.10621643,0.8732558,0.683383,-1.0440958,-0.062254027,1.0440958,"down","CCDC48",79825,"","","","chr3:128720149-128759583 (+) // 89.27 // q21.3"]
["11729732_x_at",0.0006108284,-0.044222355,0.024604797,-0.2183094,-0.0006108284,0.14326239,0.9533776,0.86851066,1.0131752,0.018883739,1.0131752,"up","FXYD2 /// FXYD6-FXYD2","100533181 /// 486","0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // non-traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0034220 // ion transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005890 // sodium:potassium-exchanging ATPase complex // non-traceable author statement /// 0005890 // sodium:potassium-exchanging ATPase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // traceable author statement /// 0005216 // ion channel activity // non-traceable author statement /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005391 // sodium:potassium-exchanging ATPase activity // traceable author statement","chr11:117690789-117693433 (-) // 76.01 // q23.3"]
["11742216_a_at",0.014280319,0.2547438,0.08160615,-0.19932961,-0.032632828,-0.014280558,0.3607668,0.0984102,1.1478688,0.1989577,1.1478688,"up","KLRD1",3824,"0007166 // cell surface receptor signaling pathway // traceable author statement /// 0050776 // regulation of immune response // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr12:10460416-10469850 (+) // 48.31 // p13.2"]
["11751606_x_at",0.021618843,0.16890931,-0.021618843,-0.15506124,-0.09330773,0.20589113,0.83267194,0.6044422,1.0500531,0.07046231,1.0500531,"up","SP140",11262,"0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006952 // defense response // traceable author statement","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:231090443-231176192 (+) // 99.81 // q37.1"]
["11728569_at",0.003344059,0.11368704,-0.003344059,-0.00945425,0.007786274,-0.008233547,0.65831584,0.34319934,1.0289667,0.041196246,1.0289667,"up","GSTCD",79807,"","","","chr4:106629940-106768882 (+) // 78.93 // q24"]
["11716564_a_at",-0.08711815,-0.079689026,-0.07441807,0.22921658,0.1397829,0.07441807,0.09885395,0.0071329344,-1.1713841,-0.2282142,1.1713841,"down","SDCCAG3",10807,"","0005737 // cytoplasm // inferred from electronic annotation","","chr9:139296380-139305054 (-) // 89.59 // q34.3"]
["11749651_a_at",0.3493433,0.102285385,-0.17462587,-0.08125067,-0.055205345,0.055205345,0.76406014,0.48928183,1.0862964,0.11941785,1.0862964,"up","RECQL5",9400,"0006259 // DNA metabolic process // non-traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006310 // DNA recombination // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // non-traceable author statement /// 0032508 // DNA duplex unwinding // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // non-traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016591 // DNA-directed RNA polymerase II, holoenzyme // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003678 // DNA helicase activity // non-traceable author statement /// 0003678 // DNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr17:73622932-73663261 (-) // 99.71 // q25.1"]
["11746568_x_at",0.04283476,-0.0049943924,-0.013814926,-0.029628754,0.027020931,0.004994869,0.91690975,0.77976143,1.005012,0.007212778,1.005012,"up","HIF3A",64344,"0001666 // response to hypoxia // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation","chr19:46807143-46841795 (+) // 85.8 // q13.32"]
["11723844_s_at",-0.017505646,0.082927704,-0.045158386,0.30765152,0.017505646,-0.060934067,0.7906078,0.53080124,-1.0579854,-0.08131975,1.0579854,"down","TMEM183A /// TMEM183B","653659 /// 92703","","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:202976523-202992667 (+) // 97.75 // q32.1 /// chr3:149699465-149701165 (-) // 97.41 // q25.1"]
["11734112_at",0.017369747,0.0701046,-0.017369747,-0.09034324,-0.08605409,0.25283957,0.99492043,0.9864003,-1.0014653,-0.0021124633,1.0014653,"down","TIGIT",201633,"0032695 // negative regulation of interleukin-12 production // inferred from mutant phenotype /// 0032733 // positive regulation of interleukin-10 production // inferred from mutant phenotype /// 0050868 // negative regulation of T cell activation // inferred from mutant phenotype","0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr3:114009905-114029135 (+) // 88.89 // q13.31"]
["11730587_at",0.09642267,0.0033471584,0.055223465,-0.097917795,-0.028341532,-0.0033473969,0.30790836,0.07207328,1.0679667,0.09486666,1.0679667,"up","GATA5",140628,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0060575 // intestinal epithelial cell differentiation // inferred from direct assay /// 0071773 // cellular response to BMP stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0001158 // enhancer sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:61038552-61051026 (-) // 92.92 // q13.33"]
["11745540_x_at",0.002537489,-0.016838789,0,0,-0.15816522,0.35274673,0.8661631,0.6689457,-1.0494457,-0.06962758,1.0494457,"down","ANK2",287,"0002027 // regulation of heart rate // inferred from mutant phenotype /// 0003283 // atrial septum development // inferred from mutant phenotype /// 0006874 // cellular calcium ion homeostasis // inferred from sequence or structural similarity /// 0007165 // signal transduction // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0008104 // protein localization // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from genetic interaction /// 0010881 // regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion // inferred from genetic interaction /// 0010881 // regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion // inferred from sequence or structural similarity /// 0010882 // regulation of cardiac muscle contraction by calcium ion signaling // inferred from mutant phenotype /// 0031647 // regulation of protein stability // inferred by curator /// 0033292 // T-tubule organization // inferred from sequence or structural similarity /// 0033365 // protein localization to organelle // inferred from genetic interaction /// 0034394 // protein localization at cell surface // inferred from sequence or structural similarity /// 0034613 // cellular protein localization // inferred from genetic interaction /// 0043268 // positive regulation of potassium ion transport // inferred from sequence or structural similarity /// 0050821 // protein stabilization // inferred from sequence or structural similarity /// 0051279 // regulation of release of sequestered calcium ion into cytosol // inferred from genetic interaction /// 0051924 // regulation of calcium ion transport // inferred from genetic interaction /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from sequence or structural similarity /// 0051928 // positive regulation of calcium ion transport // inferred from sequence or structural similarity /// 0055117 // regulation of cardiac muscle contraction // inferred from mutant phenotype /// 0060048 // cardiac muscle contraction // inferred from electronic annotation /// 0060307 // regulation of ventricular cardiomyocyte membrane repolarization // inferred from mutant phenotype /// 0070296 // sarcoplasmic reticulum calcium ion transport // traceable author statement /// 0070972 // protein localization in endoplasmic reticulum // inferred from genetic interaction /// 0072659 // protein localization in plasma membrane // inferred from genetic interaction /// 0072659 // protein localization in plasma membrane // inferred from sequence or structural similarity /// 0086004 // regulation of cardiac muscle cell contraction // inferred from genetic interaction /// 0086005 // regulation of ventricular cardiac muscle cell action potential // inferred from mutant phenotype /// 0086014 // regulation of atrial cardiac muscle cell action potential // inferred from mutant phenotype /// 0086015 // regulation of SA node cardiac muscle cell action potential // inferred from sequence or structural similarity /// 0086046 // membrane depolarization involved in regulation of SA node cardiac muscle cell action potential // traceable author statement /// 0086066 // atrial cardiomyocyte to AV node cell communication // inferred from sequence or structural similarity /// 0086070 // SA node cardiomyocyte to atrial cardiomyocyte communication // inferred from mutant phenotype /// 0086091 // regulation of heart rate by cardiac conduction // inferred from mutant phenotype /// 0086091 // regulation of heart rate by cardiac conduction // inferred from sequence or structural similarity /// 1901018 // positive regulation of potassium ion transmembrane transporter activity // inferred from sequence or structural similarity /// 1901021 // positive regulation of calcium ion transmembrane transporter activity // inferred from sequence or structural similarity /// 2001259 // positive regulation of cation channel activity // inferred from sequence or structural similarity","0005622 // intracellular // inferred from genetic interaction /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014704 // intercalated disc // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030018 // Z disc // inferred from sequence or structural similarity /// 0030315 // T-tubule // inferred from sequence or structural similarity /// 0031430 // M band // inferred from sequence or structural similarity /// 0031430 // M band // inferred from electronic annotation /// 0031672 // A band // inferred from sequence or structural similarity /// 0042383 // sarcolemma // inferred from sequence or structural similarity /// 0043034 // costamere // inferred from sequence or structural similarity","0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0030507 // spectrin binding // inferred from physical interaction /// 0030674 // protein binding, bridging // inferred from sequence or structural similarity /// 0044325 // ion channel binding // inferred from physical interaction /// 0044325 // ion channel binding // inferred from sequence or structural similarity /// 0051117 // ATPase binding // inferred from sequence or structural similarity","chr4:114262988-114302846 (+) // 98.49 // q26"]
["11718903_a_at",-0.13817596,0.023861408,0.039798737,0.009310722,-0.009310722,-0.017594814,0.9084298,0.7576089,-1.0132384,-0.0189737,1.0132384,"down","FILIP1L",11259,"","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016459 // myosin complex // non-traceable author statement","","chr3:99566204-99833349 (-) // 98.37 // q12.1"]
["11736811_a_at",0.17926288,0.017511845,-0.18765211,-0.005102873,-0.06561518,0.0051026344,0.93824977,0.82955927,1.0174181,0.02491273,1.0174181,"up","PDCD1LG2",80380,"0006955 // immune response // non-traceable author statement /// 0031295 // T cell costimulation // traceable author statement /// 0042102 // positive regulation of T cell proliferation // inferred from electronic annotation /// 0042130 // negative regulation of T cell proliferation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr9:5510526-5571282 (+) // 97.42 // p24.1"]
["11749436_a_at",0.038540363,-0.03854084,-0.07827616,0.4163866,-0.09893131,0.18301582,0.5958844,0.27554646,-1.1430718,-0.19291599,1.1430718,"down","NFIC",4782,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction /// 0006260 // DNA replication // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement","chr19:3366583-3462905 (+) // 92.69 // p13.3"]
["11720875_at",-0.26425314,0.042235374,-0.15282226,-0.042235374,0.071000814,0.15965796,0.450788,0.15398185,-1.1389896,-0.18775453,1.1389896,"down","CORO2B",10391,"0030036 // actin cytoskeleton organization // not recorded /// 0030036 // actin cytoskeleton organization // non-traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // not recorded /// 0015629 // actin cytoskeleton // non-traceable author statement /// 0016020 // membrane // non-traceable author statement","0003779 // actin binding // non-traceable author statement /// 0003779 // actin binding // inferred from electronic annotation /// 0051015 // actin filament binding // not recorded","chr15:68924326-69020142 (+) // 87.03 // q23"]
["11732097_a_at",-0.011677742,0.17230701,0.011677742,-0.17012072,-0.068099976,0.3631196,0.9760473,0.93174744,1.0110139,0.015802782,1.0110139,"up","CDC14A",8556,"0006470 // protein dephosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // traceable author statement /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr1:100818022-100965016 (+) // 98.9 // p21.2"]
["11732322_at",0.47615528,0.43030643,0.19804096,-0.19804096,-0.21036434,-0.36961222,0.07194601,0.0035790768,1.5448928,0.62750673,1.5448928,"up","FXN",2395,"0006119 // oxidative phosphorylation // inferred from electronic annotation /// 0006783 // heme biosynthetic process // non-traceable author statement /// 0006783 // heme biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // inferred from mutant phenotype /// 0006879 // cellular iron ion homeostasis // inferred from electronic annotation /// 0007005 // mitochondrion organization // inferred from electronic annotation /// 0007628 // adult walking behavior // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0009060 // aerobic respiration // inferred from electronic annotation /// 0009792 // embryo development ending in birth or egg hatching // inferred from electronic annotation /// 0010039 // response to iron ion // inferred from mutant phenotype /// 0010722 // regulation of ferrochelatase activity // inferred from direct assay /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016226 // iron-sulfur cluster assembly // inferred from electronic annotation /// 0016540 // protein autoprocessing // inferred from direct assay /// 0018283 // iron incorporation into metallo-sulfur cluster // inferred from direct assay /// 0019230 // proprioception // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from mutant phenotype /// 0040015 // negative regulation of multicellular organism growth // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0045773 // positive regulation of axon extension // inferred from electronic annotation /// 0046621 // negative regulation of organ growth // inferred from electronic annotation /// 0048554 // positive regulation of metalloenzyme activity // inferred from mutant phenotype /// 0051347 // positive regulation of transferase activity // inferred from mutant phenotype /// 0051349 // positive regulation of lyase activity // inferred from direct assay /// 0051349 // positive regulation of lyase activity // inferred from mutant phenotype /// 0051353 // positive regulation of oxidoreductase activity // inferred from mutant phenotype /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070301 // cellular response to hydrogen peroxide // inferred from direct assay /// 0090201 // negative regulation of release of cytochrome c from mitochondria // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from sequence or structural similarity /// 0005759 // mitochondrial matrix // non-traceable author statement /// 0005829 // cytosol // inferred from direct assay","0004322 // ferroxidase activity // inferred from direct assay /// 0004322 // ferroxidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008198 // ferrous iron binding // inferred from direct assay /// 0008199 // ferric iron binding // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0034986 // iron chaperone activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from direct assay /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from direct assay","chr9:71650174-71689099 (+) // 73.82 // q21.11"]
["11754262_s_at",-0.024542332,-0.24687052,-0.15098572,0.49004602,0.06481123,0.024542332,0.37913603,0.10865532,-1.2604446,-0.33393276,1.2604446,"down","CHD9",80205,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016817 // hydrolase activity, acting on acid anhydrides // inferred from electronic annotation","chr16:53357509-53361408 (+) // 97.33 // q12.2"]
["11717825_a_at",0.164536,0.038704395,-0.038704157,-0.074316025,-0.09075904,0.118858576,0.7558478,0.47705373,1.0498992,0.07025085,1.0498992,"up","STMN2",11075,"0007026 // negative regulation of microtubule depolymerization // inferred from direct assay /// 0010976 // positive regulation of neuron projection development // inferred from direct assay /// 0010977 // negative regulation of neuron projection development // inferred from direct assay /// 0030182 // neuron differentiation // non-traceable author statement /// 0031115 // negative regulation of microtubule polymerization // inferred from direct assay /// 0031117 // positive regulation of microtubule depolymerization // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0031982 // vesicle // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr8:80523048-80578397 (+) // 92.49 // q21.13"]
["11758224_s_at",0.30670738,-0.01187706,0.01187706,0.118914604,-0.12107754,-0.26608324,0.59619087,0.27586877,1.14207,0.19165115,1.14207,"up","CCDC80",151887,"0010811 // positive regulation of cell-substrate adhesion // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005614 // interstitial matrix // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0001968 // fibronectin binding // inferred from electronic annotation /// 0005539 // glycosaminoglycan binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from electronic annotation","chr3:112324111-112324574 (-) // 67.1 // q13.2"]
["11754165_a_at",-0.036666393,0.0055098534,-0.047685623,-0.0055098534,0.082588196,0.10555124,0.32658496,0.08092966,-1.0622749,-0.087157205,1.0622749,"down","LRRK1",79705,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:101514007-101609051 (+) // 93.41 // q26.3"]
["11760182_at",0.12608075,-0.04906869,0.16798043,-0.11643195,-0.059907675,0.04906869,0.51891714,0.20623267,1.0898185,0.124087855,1.0898185,"up","ZNF549",256051,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:58038668-58052090 (+) // 89.94 // q13.43"]
["11743349_a_at",0.15493202,0.06801224,-0.09689331,-0.016202927,-0.058092117,0.016202927,0.75110245,0.4695496,1.0434642,0.06138108,1.0434642,"up","TRAF7",84231,"0000185 // activation of MAPKKK activity // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from mutant phenotype /// 0043410 // positive regulation of MAPK cascade // inferred from direct assay","0000151 // ubiquitin ligase complex // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:2213542-2228132 (+) // 96.35 // p13.3"]
["11747712_s_at",-0.07802343,0.046765327,0.049094677,-0.01571083,-0.07400608,0.01571083,0.81331575,0.5700253,1.021447,0.030614268,1.021447,"up","LOC100288332 /// LOC100506193 /// LOC399491 /// LOC642778 /// LOC642799 /// NPIP /// PKD1 /// PKD1P1","100288332 /// 100506193 /// 339044 /// 399491 /// 5310 /// 642778 /// 642799 /// 9284","0001502 // cartilage condensation // inferred from electronic annotation /// 0001568 // blood vessel development // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from sequence or structural similarity /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001822 // kidney development // inferred from sequence or structural similarity /// 0001822 // kidney development // inferred from electronic annotation /// 0001892 // embryonic placenta development // inferred from sequence or structural similarity /// 0001892 // embryonic placenta development // inferred from electronic annotation /// 0006611 // protein export from nucleus // inferred from sequence or structural similarity /// 0006611 // protein export from nucleus // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from sequence or structural similarity /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // traceable author statement /// 0007160 // cell-matrix adhesion // traceable author statement /// 0007161 // calcium-independent cell-matrix adhesion // traceable author statement /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007259 // JAK-STAT cascade // inferred from sequence or structural similarity /// 0007259 // JAK-STAT cascade // inferred from electronic annotation /// 0007507 // heart development // inferred from expression pattern /// 0007507 // heart development // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from sequence or structural similarity /// 0018105 // peptidyl-serine phosphorylation // inferred from electronic annotation /// 0021510 // spinal cord development // inferred from expression pattern /// 0021915 // neural tube development // inferred from expression pattern /// 0031659 // positive regulation of cyclin-dependent protein kinase activity involved in G1/S // inferred from direct assay /// 0032092 // positive regulation of protein binding // inferred from sequence or structural similarity /// 0032092 // positive regulation of protein binding // inferred from electronic annotation /// 0042994 // cytoplasmic sequestering of transcription factor // inferred from sequence or structural similarity /// 0042994 // cytoplasmic sequestering of transcription factor // inferred from electronic annotation /// 0043588 // skin development // inferred from expression pattern /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048565 // digestive tract development // inferred from expression pattern /// 0048754 // branching morphogenesis of a tube // inferred from direct assay /// 0048806 // genitalia development // inferred from expression pattern /// 0050982 // detection of mechanical stimulus // inferred from sequence or structural similarity /// 0050982 // detection of mechanical stimulus // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation /// 0051216 // cartilage development // inferred from expression pattern /// 0060428 // lung epithelium development // inferred from expression pattern /// 0060674 // placenta blood vessel development // inferred from sequence or structural similarity /// 0060674 // placenta blood vessel development // inferred from electronic annotation /// 0072164 // mesonephric tubule development // inferred from expression pattern /// 0072177 // mesonephric duct development // inferred from expression pattern /// 0072205 // metanephric collecting duct development // inferred from expression pattern /// 0072218 // metanephric ascending thin limb development // inferred from expression pattern /// 0072237 // metanephric proximal tubule development // inferred from expression pattern /// 0072287 // metanephric distal tubule morphogenesis // inferred from expression pattern","0002133 // polycystin complex // inferred from sequence or structural similarity /// 0002133 // polycystin complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0005929 // cilium // inferred from sequence or structural similarity /// 0005929 // cilium // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0031512 // motile primary cilium // inferred from sequence or structural similarity /// 0031512 // motile primary cilium // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005261 // cation channel activity // inferred from sequence or structural similarity /// 0005261 // cation channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0044325 // ion channel binding // inferred from physical interaction","chr16:15017853-15023613 (+) // 97.16 // p13.11 /// chr16:16416504-16422098 (+) // 96.99 // p13.11 /// chr16:18434219-18439876 (-) // 96.38 // p12.3 /// chr16:2153389-2162944 (-) // 95.32 // p13.3"]
["11720424_a_at",0.13480473,-0.020198345,-0.13608027,0.12273979,0.020198345,-0.02444458,0.8470902,0.63063157,-1.0328679,-0.046655763,1.0328679,"down","MEX3C",51320,"","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003723 // RNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr18:48700919-48723690 (-) // 90.26 // q21.2"]
["11746195_x_at",0.31297874,-0.080880165,-0.17452717,0.28645992,0.080880165,-0.096095085,0.8913652,0.7209912,-1.050608,-0.071224526,1.050608,"down","LOC100288142 /// LOC100506032 /// NBPF10 /// NBPF11 /// NBPF12 /// NBPF14 /// NBPF16 /// NBPF24 /// NBPF7 /// NBPF8 /// NBPF9","100132406 /// 100288142 /// 100506032 /// 149013 /// 200030 /// 25832 /// 343505 /// 400818 /// 728841 /// 728912 /// 728936","","0005737 // cytoplasm // inferred from electronic annotation","","chr1:144621436-144830406 (+) // 84.52 // q21.1 /// chr1:145299719-145370303 (+) // 79.84 // q21.1 /// chr1:148739689-148758306 (+) // 79.43 // q21.2 /// chr1:148577604-148596262 (+) // 79.38 // q21.2 /// chr1:146401660-146467743 (+) // 79.52 // q21.1 /// chr1:148002926-148340457 (-) // 80.16 // q21.2 /// chr1:146032542-146251009 (-) // 79.7 // q21.1 /// chr1:147574323-147593003 (-) // 79.54 // q21.2"]
["11759785_s_at",-0.2312398,0.183362,-0.0610137,0.0610137,0.12556124,-0.26394033,0.9842033,0.95375764,-1.0073106,-0.0105086425,1.0073106,"down","SVIL",6840,"0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from mutant phenotype","0002102 // podosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0015629 // actin cytoskeleton // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043034 // costamere // inferred from direct assay /// 0071437 // invadopodium // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from direct assay","chr10:29769091-29785447 (-) // 99.82 // p11.23"]
["11732802_a_at",-0.18474269,0.03858185,0.14082861,-0.10241485,-0.03858185,0.24228859,0.9323733,0.81596124,-1.0249413,-0.035541322,1.0249413,"down","GRIK1",2897,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0007215 // glutamate receptor signaling pathway // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007417 // central nervous system development // traceable author statement /// 0014054 // positive regulation of gamma-aminobutyric acid secretion // inferred from electronic annotation /// 0030534 // adult behavior // inferred from electronic annotation /// 0032229 // negative regulation of synaptic transmission, GABAergic // inferred from electronic annotation /// 0032230 // positive regulation of synaptic transmission, GABAergic // inferred from electronic annotation /// 0035235 // ionotropic glutamate receptor signaling pathway // inferred from electronic annotation /// 0035249 // synaptic transmission, glutamatergic // inferred from electronic annotation /// 0042391 // regulation of membrane potential // inferred from electronic annotation /// 0048172 // regulation of short-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048266 // behavioral response to pain // inferred from electronic annotation /// 0051899 // membrane depolarization // inferred from electronic annotation /// 0051966 // regulation of synaptic transmission, glutamatergic // traceable author statement /// 0051967 // negative regulation of synaptic transmission, glutamatergic // inferred from electronic annotation /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from electronic annotation /// 0060080 // regulation of inhibitory postsynaptic membrane potential // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0008328 // ionotropic glutamate receptor complex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030288 // outer membrane-bounded periplasmic space // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0032983 // kainate selective glutamate receptor complex // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043195 // terminal button // inferred from electronic annotation /// 0043235 // receptor complex // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004970 // ionotropic glutamate receptor activity // inferred from electronic annotation /// 0005215 // transporter activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005234 // extracellular-glutamate-gated ion channel activity // inferred from electronic annotation /// 0008144 // drug binding // inferred from electronic annotation /// 0015277 // kainate selective glutamate receptor activity // inferred from direct assay /// 0015277 // kainate selective glutamate receptor activity // inferred from electronic annotation /// 0015277 // kainate selective glutamate receptor activity // traceable author statement /// 0016595 // glutamate binding // inferred from electronic annotation /// 0022843 // voltage-gated cation channel activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr21:30909082-31312282 (-) // 99.78 // q21.3"]
["11746152_a_at",0,0,0.03854084,-0.022493362,-0.024487734,0.024487734,0.68490094,0.37762105,1.0142018,0.020344684,1.0142018,"up","VWA3B",200403,"","","","chr2:98703629-98929410 (+) // 93.31 // q11.2"]
["11763323_x_at",0.204494,0.0751009,0.18174791,-0.15377569,-0.0751009,-0.17331362,0.07906867,0.0044884817,1.2208148,0.2878444,1.2208148,"up","GRAMD1B",57476,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:123431036-123498478 (+) // 95.55 // q24.1"]
["11717734_at",-0.39384127,0.010458946,0.01101923,-0.021380901,-0.010458946,0.2604351,0.6073155,0.2873299,-1.1489527,-0.20031944,1.1489527,"down","ZCCHC24",219654,"","","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:81142080-81205380 (-) // 89.93 // q22.3"]
["11737914_at",-0.13540316,0.023620605,-0.023620605,-0.07704258,0.19754314,0.27812624,0.5165031,0.2040124,-1.1313223,-0.17800994,1.1313223,"down","GPR15",2838,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0035589 // G-protein coupled purinergic nucleotide receptor signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0045028 // G-protein coupled purinergic nucleotide receptor activity // inferred from electronic annotation","chr3:98250742-98251994 (+) // 100.0 // q11.2"]
["11718736_a_at",0.1624403,0.025445461,0.049806118,-0.03786707,-0.025445938,-0.09969568,0.25666955,0.049795814,1.0970025,0.13356683,1.0970025,"up","PCMTD1",115294,"0006464 // cellular protein modification process // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0004719 // protein-L-isoaspartate (D-aspartate) O-methyltransferase activity // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr8:52730139-52811746 (-) // 93.98 // q11.23"]
["11756382_a_at",0.09326935,-0.016098976,-0.0014648438,0.07698345,0.0014648438,-0.10318279,0.8413922,0.6204618,1.0234779,0.033479966,1.0234779,"up","SUPT7L",9913,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0051457 // maintenance of protein location in nucleus // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0030914 // STAGA complex // inferred from direct assay","0003713 // transcription coactivator activity // inferred from direct assay /// 0004402 // histone acetyltransferase activity // inferred from direct assay","chr2:27875930-27886522 (-) // 94.68 // p23.3"]
["11735773_x_at",-0.2598095,0.0018558502,-0.0018558502,0.07272339,0.036121845,-0.050509453,0.6397686,0.32233873,-1.0762763,-0.106048495,1.0762763,"down","TRIM48",79097,"","0005622 // intracellular // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:55029657-55038594 (+) // 96.74 // q11 /// chr11:89657211-89666233 (+) // 93.82 // q14.3 /// chr11:89575225-89584142 (+) // 91.3 // q14.3 /// chr11:89644572-89653596 (-) // 93.95 // q14.3"]
["11720069_s_at",-0.026725769,0.021279335,0.16984653,-0.0915966,0.1374712,-0.021279335,0.8473273,0.63173443,1.0328292,0.046601646,1.0328292,"up","COMMD8",54951,"","","0005515 // protein binding // inferred from physical interaction","chr4:47452803-47465736 (-) // 95.3 // p12"]
["11744716_a_at",0.021092415,0.06051159,0.04753399,-0.055363655,-0.021092415,-0.19322109,0.30149615,0.06910088,1.0965247,0.13293833,1.0965247,"up","PFN2",5217,"0007010 // cytoskeleton organization // inferred from electronic annotation /// 0008064 // regulation of actin polymerization or depolymerization // non-traceable author statement /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030837 // negative regulation of actin filament polymerization // inferred from electronic annotation /// 0030838 // positive regulation of actin filament polymerization // inferred from electronic annotation /// 2000300 // regulation of synaptic vesicle exocytosis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // non-traceable author statement /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0043195 // terminal button // inferred from electronic annotation","0003779 // actin binding // non-traceable author statement /// 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // non-traceable author statement","chr3:149682690-149688709 (-) // 95.74 // q25.1"]
["11727515_at",-0.41533232,-0.03175211,0.19689322,-0.3374877,0.03175211,0.09038782,0.9867506,0.9610026,-1.008083,-0.0116144065,1.008083,"down","TTC9",23508,"","","","chr14:71108296-71141812 (+) // 75.88 // q24.2"]
["11755429_a_at",0.25812817,0.022956848,-0.022956848,0.12963009,-0.21797037,-0.21183777,0.58594644,0.2661776,1.1376858,0.18610214,1.1376858,"up","KIAA1549",57670,"0000165 // MAPK cascade // inferred from electronic annotation /// 0000186 // activation of MAPKK activity // inferred from electronic annotation /// 0000186 // activation of MAPKK activity // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006916 // anti-apoptosis // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009887 // organ morphogenesis // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051591 // response to cAMP // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from electronic annotation /// 0070849 // response to epidermal growth factor stimulus // inferred from direct assay /// 0071277 // cellular response to calcium ion // inferred from direct assay","0005624 // membrane fraction // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004709 // MAP kinase kinase kinase activity // inferred from electronic annotation /// 0005057 // receptor signaling protein activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0031434 // mitogen-activated protein kinase kinase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr7:138522269-138583965 (-) // 99.89 // q34"]
["11717171_at",-0.08491516,-0.23660278,-0.28578377,0.43707848,0.2124424,0.08491516,0.16233724,0.020008283,-1.363435,-0.44724596,1.363435,"down","BCL2L2",599,"0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0007283 // spermatogenesis // traceable author statement /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype","0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr14:23775970-23780968 (+) // 90.49 // q11.2"]
["11725823_a_at",-0.009232521,-0.10958195,0.009232521,0.02080965,-0.049913406,0.04011917,0.72439873,0.43106088,-1.0282557,-0.04019907,1.0282557,"down","JPH1",56704,"0007517 // muscle organ development // inferred from electronic annotation /// 0060314 // regulation of ryanodine-sensitive calcium-release channel activity // traceable author statement /// 0060402 // calcium ion transport into cytosol // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014701 // junctional sarcoplasmic reticulum membrane // traceable author statement /// 0014701 // junctional sarcoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016529 // sarcoplasmic reticulum // inferred from electronic annotation /// 0030018 // Z disc // inferred from electronic annotation /// 0030314 // junctional membrane complex // non-traceable author statement /// 0030314 // junctional membrane complex // inferred from electronic annotation /// 0033017 // sarcoplasmic reticulum membrane // inferred from electronic annotation","0008307 // structural constituent of muscle // inferred from electronic annotation","chr8:75146934-75233678 (-) // 98.24 // q21.11"]
["11716499_x_at",0.17347717,0.034870148,-0.06151676,0.24548435,-0.034870148,-0.052232742,0.9915833,0.97556376,-1.0026724,-0.0038503644,1.0026724,"down","ADRM1",11047,"0006368 // transcription elongation from RNA polymerase II promoter // inferred from mutant phenotype /// 0010950 // positive regulation of endopeptidase activity // inferred from direct assay /// 0043248 // proteasome assembly // inferred from direct assay","0000502 // proteasome complex // inferred from direct assay /// 0000502 // proteasome complex // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // traceable author statement","0002020 // protease binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0061133 // endopeptidase activator activity // inferred from direct assay /// 0070628 // proteasome binding // inferred from direct assay","chr20:60877866-60883918 (+) // 95.19 // q13.33"]
["11752681_s_at",0.19255257,0.1395483,0.20894814,-0.26783085,-0.1395483,-0.14386272,0.04913787,0.0014941812,1.2870758,0.36409697,1.2870758,"up","TMEM135",65084,"0007031 // peroxisome organization // inferred from sequence or structural similarity","0005777 // peroxisome // inferred from sequence or structural similarity /// 0005777 // peroxisome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:87029176-87033385 (+) // 78.66 // q14.2"]
["11756251_x_at",0.10254955,-0.058073044,-0.05811882,0.011856079,0.000415802,-0.000415802,0.9585281,0.8818963,-1.0059087,-0.008499406,1.0059087,"down","RPS5",6193,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // inferred from genetic interaction /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred by curator /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006450 // regulation of translational fidelity // inferred from genetic interaction /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from electronic annotation /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from direct assay /// 0003735 // structural constituent of ribosome // inferred from direct assay /// 0003735 // structural constituent of ribosome // inferred from electronic annotation","chr19:58904366-58906171 (+) // 100.0 // q13.43"]
["11719626_at",0.076067924,0.0048980713,-0.031383514,0.061393738,-0.09441471,-0.0048980713,0.8433618,0.62446564,1.0204229,0.029167231,1.0204229,"up","RDH10",157506,"0001656 // metanephros development // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0002138 // retinoic acid biosynthetic process // inferred from electronic annotation /// 0007601 // visual perception // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0008406 // gonad development // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0014032 // neural crest cell development // inferred from electronic annotation /// 0031076 // embryonic camera-type eye development // inferred from electronic annotation /// 0035115 // embryonic forelimb morphogenesis // inferred from electronic annotation /// 0042572 // retinol metabolic process // inferred from direct assay /// 0042572 // retinol metabolic process // inferred from electronic annotation /// 0042574 // retinal metabolic process // inferred from direct assay /// 0043583 // ear development // inferred from electronic annotation /// 0043584 // nose development // inferred from electronic annotation /// 0048568 // embryonic organ development // inferred from electronic annotation /// 0048703 // embryonic viscerocranium morphogenesis // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060431 // primary lung bud formation // inferred from electronic annotation /// 0060449 // bud elongation involved in lung branching // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004745 // retinol dehydrogenase activity // inferred from direct assay /// 0004745 // retinol dehydrogenase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0052650 // NADP-retinol dehydrogenase activity // inferred from electronic annotation","chr8:74206809-74237516 (+) // 87.83 // q21.11"]
["11749797_x_at",0.06369257,-0.051441193,-0.07279682,-0.017959118,0.15414715,0.017959118,0.6625539,0.348265,-1.0508554,-0.07156416,1.0508554,"down","MLH3",27030,"0006200 // ATP catabolic process // not recorded /// 0006281 // DNA repair // inferred from electronic annotation /// 0006298 // mismatch repair // not recorded /// 0006298 // mismatch repair // inferred from electronic annotation /// 0006298 // mismatch repair // non-traceable author statement /// 0006298 // mismatch repair // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007130 // synaptonemal complex assembly // inferred from electronic annotation /// 0007131 // reciprocal meiotic recombination // not recorded /// 0007131 // reciprocal meiotic recombination // non-traceable author statement /// 0007140 // male meiosis // inferred from electronic annotation /// 0007144 // female meiosis I // inferred from electronic annotation /// 0008104 // protein localization // inferred from electronic annotation","0000793 // condensed chromosome // inferred from electronic annotation /// 0000795 // synaptonemal complex // not recorded /// 0000795 // synaptonemal complex // inferred from electronic annotation /// 0001673 // male germ cell nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005712 // chiasma // not recorded /// 0005712 // chiasma // inferred from electronic annotation /// 0032300 // mismatch repair complex // not recorded /// 0032390 // MutLbeta complex // not recorded","0003682 // chromatin binding // inferred from electronic annotation /// 0003696 // satellite DNA binding // traceable author statement /// 0003697 // single-stranded DNA binding // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // not recorded /// 0019237 // centromeric DNA binding // inferred from electronic annotation /// 0030983 // mismatched DNA binding // inferred from electronic annotation /// 0032407 // MutSalpha complex binding // not recorded","chr14:75482329-75513343 (-) // 90.97 // q24.3"]
["11738241_s_at",0.1330173,-0.013175964,0.08807349,0.013175964,-0.067533016,-0.10245061,0.34964684,0.09219485,1.0879213,0.12157414,1.0879213,"up","SNTG2",54221,"0007417 // central nervous system development // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016013 // syntrophin complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from physical interaction","chr2:946555-1371382 (+) // 96.65 // p25.3"]
["11746888_x_at",-0.1107111,0.22244549,0.016465187,0.23334026,-0.0271101,-0.016465187,0.958393,0.88139194,-1.0143263,-0.020521877,1.0143263,"down","BPHL",670,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006520 // cellular amino acid metabolic process // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0009636 // response to toxin // traceable author statement /// 0016045 // detection of bacterium // inferred from electronic annotation /// 0045739 // positive regulation of DNA repair // inferred from electronic annotation","0000785 // chromatin // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003682 // chromatin binding // inferred from electronic annotation /// 0004649 // poly(ADP-ribose) glycohydrolase activity // inferred from direct assay /// 0004649 // poly(ADP-ribose) glycohydrolase activity // inferred from electronic annotation /// 0004649 // poly(ADP-ribose) glycohydrolase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation","chr6:3118609-3153428 (+) // 68.01 // p25.2"]
["11725326_a_at",0.19974709,0.09392166,0.019972324,-0.16369677,-0.019972324,-0.1719656,0.21716146,0.035982925,1.1672325,0.22309197,1.1672325,"up","CAMK2D",817,"0001558 // regulation of cell growth // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0008016 // regulation of heart contraction // traceable author statement /// 0010613 // positive regulation of cardiac muscle hypertrophy // inferred from mutant phenotype /// 0010881 // regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0060314 // regulation of ryanodine-sensitive calcium-release channel activity // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060341 // regulation of cellular localization // inferred from mutant phenotype","0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005954 // calcium- and calmodulin-dependent protein kinase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016529 // sarcoplasmic reticulum // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0033017 // sarcoplasmic reticulum membrane // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004683 // calmodulin-dependent protein kinase activity // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr4:114372189-114683202 (-) // 84.34 // q26"]
["11754340_a_at",-0.056978226,-0.026995659,-0.008728981,0.14463425,0.008728981,0.06745434,0.29703176,0.066715054,-1.0751268,-0.104506776,1.0751268,"down","ELAC2",60528,"0008033 // tRNA processing // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:12895709-12921504 (-) // 97.79 // p12"]
["11762279_at",0.02380085,-0.02380085,-0.23563147,-0.13934708,0.10946703,0.10989809,0.7108983,0.4123755,-1.0756558,-0.105216525,1.0756558,"down","","","0001525 // angiogenesis // inferred from electronic annotation /// 0015012 // heparan sulfate proteoglycan biosynthetic process // inferred from electronic annotation /// 0015015 // heparan sulfate proteoglycan biosynthetic process, enzymatic modification // traceable author statement /// 0048286 // lung alveolus development // inferred from electronic annotation /// 0060716 // labyrinthine layer blood vessel development // inferred from electronic annotation","0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008146 // sulfotransferase activity // inferred from electronic annotation /// 0008146 // sulfotransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation","chr2:129046828-129076046 (-) // 87.9 // q14.3"]
["11729348_at",-0.25573683,-0.22460842,-0.15191507,0.42354965,0.53573895,0.1519146,0.104556516,0.007906035,-1.496046,-0.58115447,1.496046,"down","HMGN5",79366,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement","0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003682 // chromatin binding // non-traceable author statement /// 0031492 // nucleosomal DNA binding // inferred from electronic annotation","chrX:80369199-80457441 (-) // 61.83 // q21.1"]
["11751017_a_at",0.06305981,0.14600086,-0.110862255,0.0128593445,-0.05570507,-0.0128593445,0.80109346,0.5480261,1.0361991,0.051301226,1.0361991,"up","EARS2",124454,"0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006418 // tRNA aminoacylation for protein translation // inferred from electronic annotation /// 0006424 // glutamyl-tRNA aminoacylation // inferred from direct assay /// 0006424 // glutamyl-tRNA aminoacylation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0043039 // tRNA aminoacylation // inferred from electronic annotation /// 0070127 // tRNA aminoacylation for mitochondrial protein translation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004818 // glutamate-tRNA ligase activity // inferred from direct assay /// 0004818 // glutamate-tRNA ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016876 // ligase activity, forming aminoacyl-tRNA and related compounds // inferred from electronic annotation /// 0050561 // glutamate-tRNA(Gln) ligase activity // inferred from direct assay","chr16:23536342-23568665 (-) // 87.11 // p12.2"]
["11741699_at",-0.03925991,0.258276,0.5374327,0.039259672,-0.2273438,-0.17374587,0.38950267,0.114646815,1.2948272,0.3727596,1.2948272,"up","HIST1H2BJ",8970,"0006334 // nucleosome assembly // non-traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation","0000786 // nucleosome // non-traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr6:27099769-27100575 (-) // 99.5 // p22.1"]
["11727136_a_at",-0.1277399,-0.07531166,-0.073366165,0.2959242,0.073366165,0.08326626,0.20349906,0.03134781,-1.183444,-0.24299146,1.183444,"down","PUS7L",83448,"0001522 // pseudouridine synthesis // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from electronic annotation /// 0009451 // RNA modification // inferred from electronic annotation","","0003723 // RNA binding // inferred from electronic annotation /// 0009982 // pseudouridine synthase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation","chr12:44122413-44152561 (-) // 86.13 // q12"]
["11752887_x_at",0.28221178,0.19244623,0.08662653,-0.19043541,-0.40153933,-0.08662605,0.15813102,0.01897124,1.331724,0.41329515,1.331724,"up","EHD1",10938,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from mutant phenotype /// 0006897 // endocytosis // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0010886 // positive regulation of cholesterol storage // inferred from sequence or structural similarity /// 0010886 // positive regulation of cholesterol storage // inferred from electronic annotation /// 0016197 // endosomal transport // inferred from electronic annotation /// 0032456 // endocytic recycling // inferred from genetic interaction /// 0032456 // endocytic recycling // inferred from mutant phenotype /// 0034383 // low-density lipoprotein particle clearance // inferred from sequence or structural similarity /// 0034383 // low-density lipoprotein particle clearance // inferred from electronic annotation /// 0042632 // cholesterol homeostasis // inferred from sequence or structural similarity /// 0042632 // cholesterol homeostasis // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from physical interaction","0005622 // intracellular // inferred from mutant phenotype /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005811 // lipid particle // inferred from sequence or structural similarity /// 0005811 // lipid particle // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0031095 // platelet dense tubular network membrane // inferred from sequence or structural similarity /// 0031095 // platelet dense tubular network membrane // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from direct assay /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from direct assay /// 0055038 // recycling endosome membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr11:64621678-64647137 (-) // 98.9 // q13.1"]
["11738328_at",-0.03703928,-0.22612238,0.03703928,-0.15570354,0.24539566,0.14428663,0.66076654,0.34592235,-1.1121621,-0.15336709,1.1121621,"down","HNMT",3176,"0002347 // response to tumor cell // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006972 // hyperosmotic response // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007585 // respiratory gaseous exchange // traceable author statement /// 0014075 // response to amine stimulus // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0042220 // response to cocaine // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0070555 // response to interleukin-1 // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation","0008168 // methyltransferase activity // inferred from electronic annotation /// 0008170 // N-methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046539 // histamine N-methyltransferase activity // inferred from electronic annotation","chr2:138721807-138739248 (+) // 65.27 // q22.1"]
["11716745_s_at",0.040686607,0.094343185,0.041135788,-0.09230614,-0.10937786,-0.040686607,0.09744382,0.006904613,1.1015325,0.139512,1.1015325,"up","FAM60A",58516,"","","","chr12:31433355-31479128 (-) // 88.0 // p11.21"]
["11730312_a_at",0.12205124,-0.07329655,-0.07794094,0.6026802,0.013869286,-0.013869286,0.68369865,0.37584645,-1.1571871,-0.21062215,1.1571871,"down","AHSA2",130872,"0006950 // response to stress // inferred from electronic annotation /// 0032781 // positive regulation of ATPase activity // inferred from electronic annotation","","0001671 // ATPase activator activity // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from electronic annotation","chr2:61404663-61414686 (+) // 89.91 // p15"]
["11742430_s_at",0.25653172,-0.1902132,-0.029284954,0.02928543,0.060573578,-0.09969425,0.9702024,0.9162466,1.0108879,0.015622966,1.0108879,"up","N6AMT1",29104,"0006479 // protein methylation // inferred from direct assay /// 0030307 // positive regulation of cell growth // inferred from direct assay /// 0032259 // methylation // inferred from electronic annotation","0043234 // protein complex // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008276 // protein methyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation","chr21:30244512-30257693 (-) // 19.97 // q21.3"]
["11723774_x_at",0.040766716,0.024282455,-0.0519104,0.10026932,-0.024282455,-0.04349518,0.96755445,0.90957326,-1.0044814,-0.0064509,1.0044814,"down","ABHD12",26090,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016787 // hydrolase activity // inferred from electronic annotation /// 0047372 // acylglycerol lipase activity // inferred from electronic annotation","chr20:25275378-25371477 (-) // 92.14 // p11.21"]
["11745054_a_at",0.001001358,-0.006231308,-0.049432755,-0.001001358,0.12112045,0.11505699,0.33866432,0.08663963,-1.0692601,-0.09661286,1.0692601,"down","MRPL43",84545,"0006412 // translation // non-traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005761 // mitochondrial ribosome // non-traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // non-traceable author statement","chr10:102746030-102747222 (-) // 96.68 // q24.31"]
["11740124_at",0.32042646,0.066990376,0.061606407,-0.3247385,-0.061606407,-0.3956728,0.21893759,0.036518984,1.3290054,0.41034693,1.3290054,"up","HIST1H2AG /// HIST1H2AH /// HIST1H2AI /// HIST1H2AK /// HIST1H2AL /// HIST1H2AM","8329 /// 8330 /// 8332 /// 8336 /// 85235 /// 8969","0006334 // nucleosome assembly // inferred from electronic annotation /// 0006334 // nucleosome assembly // non-traceable author statement","0000786 // nucleosome // inferred from electronic annotation /// 0000786 // nucleosome // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0019899 // enzyme binding // inferred from physical interaction","chr6:27859864-27860963 (-) // 61.51 // p22.1"]
["11742002_at",-0.06702328,-0.14165258,0.06702328,0.07505131,-0.080859184,0.20893335,0.6464446,0.32960233,-1.0829195,-0.11492597,1.0829195,"down","OR2H2",7932,"0006952 // defense response // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0007618 // mating // traceable author statement /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // traceable author statement /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // traceable author statement","chr6:29555682-29556745 (+) // 98.88 // p22.1"]
["11715541_a_at",-0.055430412,0.04755211,-0.077867985,0.14119291,0.010081291,-0.010081291,0.60394776,0.28376192,-1.0538331,-0.07564644,1.0538331,"down","THY1",7070,"0001525 // angiogenesis // inferred from sequence or structural similarity /// 0001525 // angiogenesis // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // inferred from sequence or structural similarity /// 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from sequence or structural similarity /// 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from sequence or structural similarity /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from sequence or structural similarity /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from sequence or structural similarity /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from sequence or structural similarity /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0046549 // retinal cone cell development // inferred from sequence or structural similarity /// 0046549 // retinal cone cell development // inferred from electronic annotation /// 0048041 // focal adhesion assembly // inferred from sequence or structural similarity /// 0048041 // focal adhesion assembly // inferred from electronic annotation /// 0050771 // negative regulation of axonogenesis // inferred from sequence or structural similarity /// 0050771 // negative regulation of axonogenesis // inferred from electronic annotation /// 0050852 // T cell receptor signaling pathway // inferred from sequence or structural similarity /// 0050852 // T cell receptor signaling pathway // inferred from electronic annotation /// 0050860 // negative regulation of T cell receptor signaling pathway // inferred from sequence or structural similarity /// 0050860 // negative regulation of T cell receptor signaling pathway // inferred from electronic annotation /// 0050870 // positive regulation of T cell activation // inferred from sequence or structural similarity /// 0050870 // positive regulation of T cell activation // inferred from electronic annotation /// 0051281 // positive regulation of release of sequestered calcium ion into cytosol // inferred from sequence or structural similarity /// 0051281 // positive regulation of release of sequestered calcium ion into cytosol // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // non-traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from sequence or structural similarity /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from direct assay /// 0030425 // dendrite // inferred from electronic annotation /// 0030426 // growth cone // inferred from sequence or structural similarity /// 0030426 // growth cone // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation /// 0031362 // anchored to external side of plasma membrane // inferred from electronic annotation /// 0045121 // membrane raft // non-traceable author statement /// 0045121 // membrane raft // inferred from electronic annotation /// 0046658 // anchored to plasma membrane // inferred from electronic annotation","0005100 // Rho GTPase activator activity // inferred from sequence or structural similarity /// 0005100 // Rho GTPase activator activity // inferred from electronic annotation /// 0005178 // integrin binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0034235 // GPI anchor binding // inferred from sequence or structural similarity /// 0034235 // GPI anchor binding // inferred from electronic annotation","chr11:119288035-119294838 (-) // 84.15 // q23.3"]
["11752661_a_at",-0.06613016,0.019300938,0.067801,-0.15728855,-0.01930046,0.19524908,0.99784994,0.99473584,1.0005343,0.00077062036,1.0005343,"up","MKS1",54903,"0030030 // cell projection organization // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from mutant phenotype /// 0042384 // cilium assembly // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from electronic annotation /// 0060271 // cilium morphogenesis // inferred from sequence or structural similarity /// 0060271 // cilium morphogenesis // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from direct assay /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0035869 // ciliary transition zone // inferred from electronic annotation /// 0036038 // TCTN-B9D complex // inferred from sequence or structural similarity /// 0036038 // TCTN-B9D complex // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr17:56282802-56296601 (-) // 96.88 // q22"]
["11748656_at",0.024636269,-0.04839754,-0.059742928,0.31166983,-0.024635792,0.048166275,0.5763126,0.2564949,-1.1015754,-0.13956821,1.1015754,"down","FHL1",2273,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007517 // muscle organ development // non-traceable author statement /// 0009887 // organ morphogenesis // non-traceable author statement /// 0010972 // negative regulation of G2/M transition of mitotic cell cycle // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 2000134 // negative regulation of G1/S transition of mitotic cell cycle // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:135252084-135293482 (+) // 98.11 // q26.3"]
["11741815_a_at",-0.20724916,-0.07702494,0.03963232,0.04270315,0.36377,-0.039632797,0.5418322,0.22511348,-1.1517498,-0.20382741,1.1517498,"down","TAB3",257397,"0000187 // activation of MAPK activity // traceable author statement /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0007254 // JNK cascade // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:30845559-30907511 (-) // 97.98 // p21.2"]
["11717505_a_at",-0.1223197,-0.024829865,0.024829865,0.09017658,-0.2162962,0.053389072,0.95908535,0.8834575,-1.0115234,-0.016529646,1.0115234,"down","TRAM2",9697,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0032964 // collagen biosynthetic process // inferred from mutant phenotype","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr6:52362199-52441834 (-) // 91.56 // p12.2"]
["11744186_at",-0.014469624,0.014469624,-0.058979988,-0.015016079,0.059657574,0.09252596,0.4636173,0.16318353,-1.0463623,-0.06538244,1.0463623,"down","C16orf70",80262,"","","0005515 // protein binding // inferred from physical interaction","chr16:67143914-67182447 (+) // 94.71 // q22.1"]
["11723832_a_at",0.09709072,0.08870983,-0.11251116,0.07722664,-0.07722616,-0.2972188,0.6956287,0.39073223,1.0893764,0.12350258,1.0893764,"up","TAPT1",202018,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0048706 // embryonic skeletal system development // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0016520 // growth hormone-releasing hormone receptor activity // traceable author statement","chr4:16162127-16228164 (-) // 93.88 // p15.32"]
["11716094_a_at",0.17379093,-0.028261662,0.028262138,-0.08014965,-0.20774317,0.060541153,0.563931,0.24458131,1.0971147,0.13371433,1.0971147,"up","KLF6",1316,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016049 // cell growth // non-traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0030183 // B cell differentiation // non-traceable author statement /// 0042060 // wound healing // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:3818745-3827474 (-) // 93.49 // p15.1"]
["11756082_a_at",0.15234137,-0.003742218,-0.24442196,0.21741915,0.003742218,-0.15249014,0.9030538,0.7453142,-1.0387377,-0.05483133,1.0387377,"down","MID1",4281,"0000226 // microtubule cytoskeleton organization // traceable author statement /// 0007026 // negative regulation of microtubule depolymerization // inferred from electronic annotation /// 0007389 // pattern specification process // traceable author statement /// 0032874 // positive regulation of stress-activated MAPK cascade // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005875 // microtubule associated complex // traceable author statement /// 0005881 // cytoplasmic microtubule // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:10417430-10535202 (-) // 97.06 // p22.2"]
["11734773_x_at",-0.047373533,-0.060097694,0.043642282,-0.043642282,0.05757594,0.254179,0.6212955,0.30143583,-1.0797125,-0.110647224,1.0797125,"down","SFTPB",6439,"0001666 // response to hypoxia // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // inferred from electronic annotation /// 0007585 // respiratory gaseous exchange // inferred from electronic annotation /// 0007585 // respiratory gaseous exchange // traceable author statement /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0009887 // organ morphogenesis // traceable author statement /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0033189 // response to vitamin A // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0055093 // response to hyperoxia // inferred from electronic annotation /// 0070741 // response to interleukin-6 // inferred from electronic annotation /// 0070848 // response to growth factor stimulus // inferred from electronic annotation /// 0070849 // response to epidermal growth factor stimulus // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from electronic annotation /// 0071732 // cellular response to nitric oxide // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005771 // multivesicular body // inferred from electronic annotation /// 0042599 // lamellar body // inferred from electronic annotation","","chr2:85884439-85895864 (-) // 69.16 // p11.2"]
["11762420_at",-0.0758276,-0.068286896,0.068286896,0.14911366,-0.103782654,0.20908737,0.6717356,0.36049855,-1.0792896,-0.11008196,1.0792896,"down","FBXO11",80204,"0006464 // cellular protein modification process // inferred from direct assay /// 0006511 // ubiquitin-dependent protein catabolic process // non-traceable author statement /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0016567 // protein ubiquitination // non-traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0035246 // peptidyl-arginine N-methylation // inferred from direct assay","0000151 // ubiquitin ligase complex // non-traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // non-traceable author statement /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016274 // protein-arginine N-methyltransferase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:48033908-48038800 (-) // 86.24 // p16.3"]
["11736294_at",-0.13496399,-0.021277428,0.29313946,0.13173342,0.021277428,-0.23193169,0.87629575,0.68929327,1.0511289,0.07193955,1.0511289,"up","FGFBP3",143282,"0043117 // positive regulation of vascular permeability // inferred from direct assay /// 0045743 // positive regulation of fibroblast growth factor receptor signaling pathway // inferred from genetic interaction","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // inferred from electronic annotation","0008201 // heparin binding // inferred from direct assay /// 0017134 // fibroblast growth factor binding // inferred from physical interaction /// 0019838 // growth factor binding // inferred from electronic annotation","chr10:93666344-93669270 (-) // 83.88 // q23.32"]
["11755551_a_at",-0.03203416,0.101946354,-0.050855637,0.03203416,0.25335717,-0.042085648,0.7717386,0.500107,-1.0531783,-0.074749716,1.0531783,"down","MYO18B",84700,"0001570 // vasculogenesis // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0048739 // cardiac muscle fiber development // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016459 // myosin complex // inferred from electronic annotation /// 0016461 // unconventional myosin complex // inferred from direct assay /// 0030017 // sarcomere // inferred from electronic annotation /// 0030018 // Z disc // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation","chr22:26351280-26426611 (+) // 99.77 // q12.1"]
["11749844_x_at",0.06457424,0.0717392,0.08549309,-0.19956017,-0.08831501,-0.06457424,0.11833145,0.010406556,1.141886,0.19141862,1.141886,"up","CSF2RA",1438,"0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004896 // cytokine receptor activity // inferred from electronic annotation","chrX:1393273-1428372 (+) // 83.92 // p22.33 /// chrY:1343273-1378372 (+) // 83.92 // p11.32"]
["11726024_at",0.33040142,-0.12364864,0.042748928,0.21818066,-0.042748928,-0.13341475,0.8833931,0.7039782,1.0491068,0.0691616,1.0491068,"up","EDN1",1906,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001501 // skeletal system development // inferred from electronic annotation /// 0001516 // prostaglandin biosynthetic process // inferred from direct assay /// 0001569 // patterning of blood vessels // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001821 // histamine secretion // inferred from electronic annotation /// 0003100 // regulation of systemic arterial blood pressure by endothelin // inferred from direct assay /// 0006885 // regulation of pH // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from direct assay /// 0007186 // G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from direct assay /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0007267 // cell-cell signaling // inferred from direct assay /// 0007507 // heart development // inferred from electronic annotation /// 0007585 // respiratory gaseous exchange // inferred from electronic annotation /// 0007589 // body fluid secretion // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009953 // dorsal/ventral pattern formation // inferred from electronic annotation /// 0010259 // multicellular organismal aging // inferred from electronic annotation /// 0010460 // positive regulation of heart rate // inferred from direct assay /// 0010595 // positive regulation of endothelial cell migration // traceable author statement /// 0010613 // positive regulation of cardiac muscle hypertrophy // inferred from direct assay /// 0010870 // positive regulation of receptor biosynthetic process // inferred from direct assay /// 0014032 // neural crest cell development // inferred from electronic annotation /// 0014065 // phosphatidylinositol 3-kinase cascade // inferred from direct assay /// 0014824 // artery smooth muscle contraction // inferred from direct assay /// 0014824 // artery smooth muscle contraction // traceable author statement /// 0014826 // vein smooth muscle contraction // inferred from direct assay /// 0015758 // glucose transport // inferred from electronic annotation /// 0016049 // cell growth // inferred from electronic annotation /// 0019229 // regulation of vasoconstriction // inferred from electronic annotation /// 0019233 // sensory perception of pain // inferred from electronic annotation /// 0019722 // calcium-mediated signaling // inferred from direct assay /// 0030072 // peptide hormone secretion // inferred from direct assay /// 0030185 // nitric oxide transport // inferred from direct assay /// 0030195 // negative regulation of blood coagulation // traceable author statement /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030593 // neutrophil chemotaxis // inferred from direct assay /// 0030818 // negative regulation of cAMP biosynthetic process // inferred from electronic annotation /// 0031583 // phospholipase D-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0032269 // negative regulation of cellular protein metabolic process // inferred from direct assay /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0033574 // response to testosterone stimulus // inferred from electronic annotation /// 0034392 // negative regulation of smooth muscle cell apoptotic process // inferred from electronic annotation /// 0035094 // response to nicotine // inferred from electronic annotation /// 0035810 // positive regulation of urine volume // inferred from electronic annotation /// 0035815 // positive regulation of renal sodium excretion // inferred from electronic annotation /// 0042045 // epithelial fluid transport // inferred from electronic annotation /// 0042310 // vasoconstriction // inferred from direct assay /// 0042310 // vasoconstriction // inferred from electronic annotation /// 0042313 // protein kinase C deactivation // inferred from direct assay /// 0042474 // middle ear morphogenesis // inferred from electronic annotation /// 0042482 // positive regulation of odontogenesis // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042554 // superoxide anion generation // inferred from electronic annotation /// 0043179 // rhythmic excitation // inferred from electronic annotation /// 0043200 // response to amino acid stimulus // inferred from electronic annotation /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0043507 // positive regulation of JUN kinase activity // inferred from direct assay /// 0045321 // leukocyte activation // traceable author statement /// 0045429 // positive regulation of nitric oxide biosynthetic process // traceable author statement /// 0045793 // positive regulation of cell size // inferred from direct assay /// 0045840 // positive regulation of mitosis // inferred from direct assay /// 0045987 // positive regulation of smooth muscle contraction // inferred from electronic annotation /// 0046887 // positive regulation of hormone secretion // inferred from direct assay /// 0046888 // negative regulation of hormone secretion // inferred from electronic annotation /// 0048016 // inositol phosphate-mediated signaling // inferred from direct assay /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from direct assay /// 0050880 // regulation of blood vessel size // inferred from electronic annotation /// 0051216 // cartilage development // inferred from electronic annotation /// 0051482 // elevation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway // inferred from electronic annotation /// 0051771 // negative regulation of nitric-oxide synthase biosynthetic process // inferred from direct assay /// 0051899 // membrane depolarization // inferred from electronic annotation /// 0051930 // regulation of sensory perception of pain // inferred from electronic annotation /// 0060137 // maternal process involved in parturition // inferred from electronic annotation /// 0060298 // positive regulation of sarcomere organization // inferred from mutant phenotype /// 0060585 // positive regulation of prostaglandin-endoperoxide synthase activity // inferred from mutant phenotype /// 0070101 // positive regulation of chemokine-mediated signaling pathway // inferred by curator /// 0071347 // cellular response to interleukin-1 // inferred from electronic annotation /// 0071356 // cellular response to tumor necrosis factor // inferred from electronic annotation /// 0090023 // positive regulation of neutrophil chemotaxis // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay","0005102 // receptor binding // inferred from electronic annotation /// 0005125 // cytokine activity // inferred from direct assay /// 0005179 // hormone activity // inferred from direct assay /// 0031707 // endothelin A receptor binding // inferred from direct assay /// 0031707 // endothelin A receptor binding // inferred from electronic annotation /// 0031708 // endothelin B receptor binding // inferred from direct assay /// 0031708 // endothelin B receptor binding // inferred from electronic annotation","chr6:12290311-12297426 (+) // 98.8 // p24.1"]
["11719786_at",-0.06348276,-0.01398468,-0.07425642,0.36502504,0.01398468,0.0371356,0.4786895,0.17470059,-1.1402022,-0.18928964,1.1402022,"down","SMCR7L",54471,"0008053 // mitochondrial fusion // inferred from mutant phenotype","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr22:39896351-39914137 (+) // 94.16 // q13.1"]
["11747556_s_at",-0.20732832,0.0058956146,0.12341833,-0.02938366,-0.0058956146,0.043628693,0.91967577,0.7860114,-1.0201547,-0.028787965,1.0201547,"down","MIR4723 /// SARM1 /// TMEM199","100616388 /// 147007 /// 23098","0007165 // signal transduction // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr17:26684669-26708716 (+) // 99.33 // q11.2"]
["11757808_s_at",0.014307022,0.017495155,0.08932638,-0.014307022,-0.044175625,-0.15583134,0.33934832,0.086989135,1.0805862,0.111814156,1.0805862,"up","RERE",473,"0006338 // chromatin remodeling // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006607 // NLS-bearing substrate import into nucleus // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation","0000118 // histone deacetylase complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008267 // poly-glutamine tract binding // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:8412464-8413291 (-) // 95.06 // p36.23"]
["11751853_s_at",-0.041215897,-0.09612179,-0.07021141,0.16896439,0.041215897,0.1727972,0.13084622,0.012905816,-1.1461868,-0.19684222,1.1461868,"down","MTAP",4507,"0000096 // sulfur amino acid metabolic process // traceable author statement /// 0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0006166 // purine ribonucleoside salvage // inferred from electronic annotation /// 0006595 // polyamine metabolic process // traceable author statement /// 0006738 // nicotinamide riboside catabolic process // inferred from direct assay /// 0009116 // nucleoside metabolic process // inferred from electronic annotation /// 0019509 // L-methionine salvage from methylthioadenosine // inferred from electronic annotation /// 0019509 // L-methionine salvage from methylthioadenosine // traceable author statement /// 0033574 // response to testosterone stimulus // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004645 // phosphorylase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016763 // transferase activity, transferring pentosyl groups // inferred from electronic annotation /// 0017061 // S-methyl-5-thioadenosine phosphorylase activity // traceable author statement /// 0017061 // S-methyl-5-thioadenosine phosphorylase activity // inferred from electronic annotation","chr9:21802670-21818201 (+) // 71.33 // p21.3"]
["11716444_a_at",0.08369255,-0.06295776,-0.072514534,0.17798996,0.03813362,-0.03813362,0.70081127,0.3978915,-1.0545225,-0.0765899,1.0545225,"down","KEAP1",9817,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0042994 // cytoplasmic sequestering of transcription factor // inferred from electronic annotation /// 0045604 // regulation of epidermal cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr19:10596800-10614417 (-) // 94.83 // p13.2"]
["11744861_a_at",0.011271,0.02319479,0.06806946,-0.12983084,-0.011271,-0.16337776,0.2601135,0.051190678,1.0986041,0.13567156,1.0986041,"up","DHRS7",51635,"0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation","chr14:60611496-60636581 (-) // 85.48 // q23.1"]
["11747464_a_at",0.07309151,0.10334778,0.099282265,-0.07309151,-0.15293503,-0.18638802,0.06432649,0.0027790815,1.17233,0.22937876,1.17233,"up","SERINC3",10955,"0006917 // induction of apoptosis // inferred from electronic annotation","0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","","chr20:43128607-43150737 (-) // 99.95 // q13.12"]
["11756863_a_at",0.026262283,0.24521446,0.079926014,-0.06934166,-0.026262283,-0.09692931,0.27749562,0.058375485,1.1339146,0.18131198,1.1339146,"up","DDX3Y",8653,"","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chrY:15016802-15026743 (+) // 98.9 // q11.21"]
["11746944_a_at",-0.036675215,-0.07336688,0.007338047,0.0035700798,0.07357001,-0.0035700798,0.4560935,0.15817289,-1.0415688,-0.058758076,1.0415688,"down","AGXT2",64902,"0006206 // pyrimidine base metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009436 // glyoxylate catabolic process // inferred from direct assay /// 0019265 // glycine biosynthetic process, by transamination of glyoxylate // inferred from direct assay /// 0019481 // L-alanine catabolic process, by transamination // inferred from direct assay /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from direct assay /// 0046135 // pyrimidine nucleoside catabolic process // traceable author statement /// 0046487 // glyoxylate metabolic process // traceable author statement /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0008453 // alanine-glyoxylate transaminase activity // inferred from direct assay /// 0008453 // alanine-glyoxylate transaminase activity // traceable author statement /// 0008453 // alanine-glyoxylate transaminase activity // inferred from electronic annotation /// 0008483 // transaminase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0047305 // (R)-3-amino-2-methylpropionate-pyruvate transaminase activity // inferred from electronic annotation","chr5:35033115-35048054 (-) // 99.63 // p13.2"]
["11723058_a_at",0.12063408,0.09535694,-0.008576393,-0.018113136,0.008576393,-0.03619194,0.3859994,0.112542056,1.0602329,0.084381185,1.0602329,"up","TAP2",6891,"0001916 // positive regulation of T cell mediated cytotoxicity // not recorded /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002481 // antigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent // not recorded /// 0002485 // antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-dependent // not recorded /// 0002489 // antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent // not recorded /// 0002489 // antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent // inferred from mutant phenotype /// 0002504 // antigen processing and presentation of peptide or polysaccharide antigen via MHC class II // inferred from electronic annotation /// 0002591 // positive regulation of antigen processing and presentation of peptide antigen via MHC class I // not recorded /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006952 // defense response // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0006968 // cellular defense response // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0015833 // peptide transport // not recorded /// 0015833 // peptide transport // inferred from genetic interaction /// 0015833 // peptide transport // inferred from electronic annotation /// 0015833 // peptide transport // traceable author statement /// 0019060 // intracellular transport of viral proteins in host cell // inferred from mutant phenotype /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0019885 // antigen processing and presentation of endogenous peptide antigen via MHC class I // inferred from direct assay /// 0019885 // antigen processing and presentation of endogenous peptide antigen via MHC class I // inferred from mutant phenotype /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0046967 // cytosol to ER transport // inferred from mutant phenotype /// 0046968 // peptide antigen transport // inferred from direct assay /// 0046968 // peptide antigen transport // inferred from mutant phenotype /// 0055085 // transmembrane transport // not recorded /// 0055085 // transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005743 // mitochondrial inner membrane // not recorded /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // not recorded /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // inferred from direct assay /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0042613 // MHC class II protein complex // inferred from electronic annotation /// 0042825 // TAP complex // not recorded /// 0042825 // TAP complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005215 // transporter activity // inferred from direct assay /// 0005215 // transporter activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0015197 // peptide transporter activity // inferred from electronic annotation /// 0015197 // peptide transporter activity // inferred from genetic interaction /// 0015197 // peptide transporter activity // traceable author statement /// 0015421 // oligopeptide-transporting ATPase activity // not recorded /// 0015433 // peptide antigen-transporting ATPase activity // inferred from mutant phenotype /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042288 // MHC class I protein binding // not recorded /// 0042605 // peptide antigen binding // not recorded /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation /// 0046978 // TAP1 binding // not recorded /// 0046978 // TAP1 binding // inferred from physical interaction /// 0046979 // TAP2 binding // not recorded /// 0046980 // tapasin binding // not recorded /// 0046980 // tapasin binding // inferred from sequence or structural similarity","chr6:32793047-32806547 (-) // 76.62 // p21.32"]
["11747096_a_at",-0.18922615,0.013446808,0.025928497,-0.013446808,0.122535706,-0.051704407,0.7537354,0.47404066,-1.0490464,-0.06907848,1.0490464,"down","KCNK1",3775,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // traceable author statement /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0035094 // response to nicotine // inferred from electronic annotation /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0008076 // voltage-gated potassium channel complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0031526 // brush border membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005242 // inward rectifier potassium channel activity // traceable author statement /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005267 // potassium channel activity // inferred from electronic annotation","chr1:233749892-233808024 (+) // 93.57 // q42.2"]
["11742319_a_at",-0.15527153,0.0004892349,0.08671236,-0.19283438,-0.0004892349,0.20389462,0.9482469,0.85514563,-1.0183359,-0.02621357,1.0183359,"down","KLK15",55554,"0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // non-traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // non-traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // traceable author statement /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr19:51328544-51334779 (-) // 86.69 // q13.33"]
["11739727_x_at",0.019831657,-0.019831657,-0.045610428,0.13916492,0.04330635,-0.07507515,0.754612,0.47536305,-1.0359843,-0.051002108,1.0359843,"down","NAP1L1",4673,"0006260 // DNA replication // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0006334 // nucleosome assembly // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005678 // chromatin assembly complex // traceable author statement /// 0042470 // melanosome // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr12:76438671-76478738 (-) // 99.39 // q21.2"]
["11716901_s_at",-0.28832674,-0.027689457,-0.062402725,0.09390211,0.12879276,0.02768898,0.31101063,0.07344886,-1.1563683,-0.20960091,1.1563683,"down","TGOLN2",10618,"","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // traceable author statement /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030133 // transport vesicle // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr2:85545145-85555407 (-) // 91.76 // p11.2"]
["11746783_x_at",0.083051205,-0.24834204,-0.348917,0.16505861,-0.076143265,0.07614374,0.5138228,0.20149302,-1.1699301,-0.22642234,1.1699301,"down","FKBP9",11328,"0000413 // protein peptidyl-prolyl isomerization // not recorded /// 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006457 // protein folding // inferred from sequence or structural similarity /// 0006457 // protein folding // inferred from electronic annotation /// 0018208 // peptidyl-proline modification // not recorded","0005783 // endoplasmic reticulum // not recorded /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0016020 // membrane // not recorded","0003755 // peptidyl-prolyl cis-trans isomerase activity // not recorded /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005528 // FK506 binding // not recorded /// 0016853 // isomerase activity // inferred from electronic annotation","chr7:32997085-33046521 (+) // 99.91 // p14.3"]
["11716339_a_at",0.46377182,0.0335598,0.12985039,-0.0335598,-0.18840218,-0.27742767,0.29290095,0.06481238,1.2973106,0.37552392,1.2973106,"up","INSIG1",3638,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006641 // triglyceride metabolic process // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // inferred from electronic annotation /// 0006991 // response to sterol depletion // inferred from electronic annotation /// 0008152 // metabolic process // traceable author statement /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0010894 // negative regulation of steroid biosynthetic process // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // inferred from electronic annotation /// 0030967 // ER-nuclear sterol response pathway // inferred from direct assay /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0042474 // middle ear morphogenesis // inferred from electronic annotation /// 0045599 // negative regulation of fat cell differentiation // inferred from electronic annotation /// 0045717 // negative regulation of fatty acid biosynthetic process // inferred from electronic annotation /// 0060021 // palate development // inferred from electronic annotation /// 0060363 // cranial suture morphogenesis // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr7:155089485-155101945 (+) // 96.86 // q36.2"]
["11718327_a_at",0.14324093,0.002131939,-0.0021324158,0.23371983,-0.083073616,-0.066170216,0.9541642,0.8712942,1.0136701,0.019588184,1.0136701,"up","WWC3",55841,"","","","chrX:9983794-10112518 (+) // 94.73 // p22.2"]
["11726667_a_at",0.25688076,0.03998947,0.1678958,-0.03998947,-0.066161156,-0.05630827,0.19858731,0.030008214,1.1559467,0.20907491,1.1559467,"up","MFSD8",256471,"0006810 // transport // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","","chr4:128838960-128887139 (-) // 92.95 // q28.2"]
["11752657_a_at",-0.03374815,0.03374815,-0.15391684,-0.07037687,0.13116884,0.110547066,0.5873784,0.26792637,-1.078046,-0.10841869,1.078046,"down","DNMT3B",1789,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006306 // DNA methylation // non-traceable author statement /// 0006306 // DNA methylation // traceable author statement /// 0006306 // DNA methylation // inferred from electronic annotation /// 0006346 // methylation-dependent chromatin silencing // inferred from electronic annotation /// 0006349 // regulation of gene expression by genetic imprinting // inferred from electronic annotation /// 0010212 // response to ionizing radiation // inferred from electronic annotation /// 0010424 // DNA methylation on cytosine within a CG sequence // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0031503 // protein complex localization // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043045 // DNA methylation involved in embryo development // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045814 // negative regulation of gene expression, epigenetic // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0046498 // S-adenosylhomocysteine metabolic process // inferred from electronic annotation /// 0046499 // S-adenosylmethioninamine metabolic process // inferred from electronic annotation /// 0051571 // positive regulation of histone H3-K4 methylation // inferred from mutant phenotype /// 0051573 // negative regulation of histone H3-K9 methylation // inferred from mutant phenotype /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation /// 0090116 // C-5 methylation of cytosine // inferred from direct assay /// 0090116 // C-5 methylation of cytosine // non-traceable author statement /// 0090116 // C-5 methylation of cytosine // traceable author statement /// 0090116 // C-5 methylation of cytosine // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005720 // nuclear heterochromatin // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from mutant phenotype /// 0003886 // DNA (cytosine-5-)-methyltransferase activity // inferred from direct assay /// 0003886 // DNA (cytosine-5-)-methyltransferase activity // non-traceable author statement /// 0003886 // DNA (cytosine-5-)-methyltransferase activity // traceable author statement /// 0003886 // DNA (cytosine-5-)-methyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0009008 // DNA-methyltransferase activity // non-traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0045322 // unmethylated CpG binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051718 // DNA (cytosine-5-)-methyltransferase activity, acting on CpG substrates // inferred from electronic annotation","chr20:31350423-31388709 (+) // 99.77 // q11.21"]
["11749090_a_at",0.084445,0.057395935,0.15669441,-0.17962456,-0.057395935,-0.15588093,0.10776459,0.008471503,1.1732243,0.2304789,1.1732243,"up","FOXP1",27086,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0002053 // positive regulation of mesenchymal cell proliferation // not recorded /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0002329 // pre-B cell differentiation // not recorded /// 0002329 // pre-B cell differentiation // inferred from electronic annotation /// 0002639 // positive regulation of immunoglobulin production // not recorded /// 0002639 // positive regulation of immunoglobulin production // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007389 // pattern specification process // not recorded /// 0007507 // heart development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // not recorded /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from electronic annotation /// 0009790 // embryo development // not recorded /// 0009790 // embryo development // inferred from electronic annotation /// 0021517 // ventral spinal cord development // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0033152 // immunoglobulin V(D)J recombination // not recorded /// 0033152 // immunoglobulin V(D)J recombination // inferred from electronic annotation /// 0045214 // sarcomere organization // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048745 // smooth muscle tissue development // not recorded /// 0048745 // smooth muscle tissue development // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // not recorded /// 0055007 // cardiac muscle cell differentiation // not recorded /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0060043 // regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0060501 // positive regulation of epithelial cell proliferation involved in lung morphogenesis // not recorded /// 0072358 // cardiovascular system development // inferred from electronic annotation /// 2000727 // positive regulation of cardiac muscle cell differentiation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // not recorded /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // not recorded","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // not recorded /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // not recorded /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008134 // transcription factor binding // not recorded /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008301 // DNA binding, bending // not recorded /// 0042803 // protein homodimerization activity // not recorded /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // not recorded /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr3:71005925-71592708 (-) // 98.12 // p13"]
["11719510_at",-0.11966419,-0.08834505,-0.13962889,0.5225458,0.42213535,0.088344574,0.1824602,0.025253927,-1.3757528,-0.46022126,1.3757528,"down","HELZ",9931,"","0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:65066559-65242105 (-) // 94.74 // q24.2"]
["11753191_a_at",-0.366457,-0.069980145,-0.19873047,0.06997967,0.1641016,0.105659485,0.17310962,0.02262919,-1.252638,-0.32496953,1.252638,"down","SLC17A5",26503,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006820 // anion transport // traceable author statement /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0015739 // sialic acid transport // inferred from direct assay /// 0015739 // sialic acid transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005765 // lysosomal membrane // traceable author statement /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation","0005351 // sugar:hydrogen symporter activity // traceable author statement /// 0015136 // sialic acid transmembrane transporter activity // inferred from direct assay /// 0015136 // sialic acid transmembrane transporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation","chr6:74325034-74363696 (-) // 98.58 // q13"]
["11737275_x_at",0.15838385,-0.005077839,-0.066009045,0.14883804,0.005077839,-0.04643154,0.98039234,0.9432932,-1.0046751,-0.006729098,1.0046751,"down","WDR52",55779,"","","","chr3:113081539-113160457 (-) // 98.48 // q13.2"]
["11757003_x_at",0.0073108673,-0.1015234,-0.09939289,0.09371376,0.10465717,-0.0073099136,0.29206285,0.06440815,-1.092946,-0.1282222,1.092946,"down","RPL6",6128,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // traceable author statement","chr12:112843006-112847362 (-) // 100.0 // q24.13"]
["11721135_s_at",0.039240837,-0.1268034,-0.041474342,0.088707924,0.045868874,-0.039240837,0.6067574,0.2869123,-1.0532085,-0.07479103,1.0532085,"down","IGFBP3",3486,"0001558 // regulation of cell growth // inferred from electronic annotation /// 0001933 // negative regulation of protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from genetic interaction /// 0009968 // negative regulation of signal transduction // non-traceable author statement /// 0014912 // negative regulation of smooth muscle cell migration // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0045663 // positive regulation of myoblast differentiation // inferred from direct assay /// 0048662 // negative regulation of smooth muscle cell proliferation // inferred from direct assay","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0016942 // insulin-like growth factor binding protein complex // inferred by curator /// 0016942 // insulin-like growth factor binding protein complex // inferred from electronic annotation /// 0042567 // insulin-like growth factor ternary complex // inferred from electronic annotation /// 0042568 // insulin-like growth factor binary complex // inferred from electronic annotation","0001968 // fibronectin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005520 // insulin-like growth factor binding // non-traceable author statement /// 0005520 // insulin-like growth factor binding // inferred from electronic annotation /// 0008160 // protein tyrosine phosphatase activator activity // inferred from direct assay /// 0019838 // growth factor binding // inferred from electronic annotation /// 0031994 // insulin-like growth factor I binding // inferred from physical interaction /// 0031994 // insulin-like growth factor I binding // inferred from electronic annotation /// 0031995 // insulin-like growth factor II binding // inferred from electronic annotation /// 0046872 // metal ion binding // non-traceable author statement","chr7:45951844-45960871 (-) // 95.52 // p12.3"]
["11737988_at",-0.045431376,0.012166262,0.1338973,0.018538952,-0.012166023,-0.061729193,0.71632284,0.4192073,1.0366983,0.05199616,1.0366983,"up","ECT2L",345930,"0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation","chr6:139117254-139225207 (+) // 91.91 // q24.1"]
["11730848_at",0.19695377,0.05401659,-0.023912907,0.023912907,-0.055193424,-0.08122921,0.500045,0.19096833,1.0816165,0.113189094,1.0816165,"up","ABHD13",84945,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016787 // hydrolase activity // inferred from electronic annotation","chr13:108870726-108886602 (+) // 99.4 // q33.3"]
["11755461_a_at",-0.012530327,-0.0028820038,0.08003044,-0.05680561,0.0028820038,0.28607082,0.8503692,0.63769495,-1.0394664,-0.055843096,1.0394664,"down","NXF3",56000,"0006406 // mRNA export from nucleus // inferred from direct assay /// 0006406 // mRNA export from nucleus // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0016973 // poly(A)+ mRNA export from nucleus // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0042272 // nuclear RNA export factor complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chrX:102330751-102336663 (-) // 98.46 // q22.1"]
["11729942_at",0.23987865,0.38469315,0.4258747,-0.4862194,-0.23987818,-0.25971985,0.057607226,0.0022018917,1.6007574,0.6787546,1.6007574,"up","TMEM56",148534,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:95582847-95663159 (+) // 94.92 // p21.3"]
["11734256_a_at",0.00033330917,-0.13612604,-0.10347891,0.34625387,-0.00033330917,0.07301283,0.40602893,0.12462046,-1.1642506,-0.21940164,1.1642506,"down","PRKAG3",53632,"0005978 // glycogen biosynthetic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0007243 // intracellular protein kinase cascade // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0015758 // glucose transport // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0046320 // regulation of fatty acid oxidation // traceable author statement","0005829 // cytosol // traceable author statement /// 0031588 // AMP-activated protein kinase complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004679 // AMP-activated protein kinase activity // traceable author statement /// 0004679 // AMP-activated protein kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from direct assay","chr2:219687105-219696539 (-) // 99.66 // q35"]
["11748782_a_at",0.04795456,0.014532089,-0.00065135956,0.00065135956,-0.22707081,-0.11094475,0.3970636,0.11914668,1.0966221,0.13306646,1.0966221,"up","CASP9",842,"0006508 // proteolysis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008635 // activation of cysteine-type endopeptidase activity involved in apoptotic process by cytochrome c // traceable author statement /// 0009411 // response to UV // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0071549 // cellular response to dexamethasone stimulus // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0043293 // apoptosome // inferred from direct assay","0004197 // cysteine-type endopeptidase activity // inferred from electronic annotation /// 0004197 // cysteine-type endopeptidase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008047 // enzyme activator activity // traceable author statement /// 0008233 // peptidase activity // inferred from direct assay /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr1:15818860-15850695 (-) // 89.02 // p36.21"]
["11752583_a_at",0.026661873,-0.026661873,-0.039277554,0.16401243,-0.0389266,0.056397438,0.620739,0.30097598,-1.0523298,-0.07358689,1.0523298,"down","CD6",923,"0007155 // cell adhesion // inferred from electronic annotation","0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005044 // scavenger receptor activity // inferred from electronic annotation","chr11:60739337-60786793 (+) // 99.94 // q12.2"]
["11754993_s_at",0.28273773,0.04176712,-0.04176712,0.16315937,-0.1484518,-0.19906044,0.66799355,0.3558901,1.1139596,0.15569684,1.1139596,"up","PXDN",7837,"0001960 // negative regulation of cytokine-mediated signaling pathway // non-traceable author statement /// 0006955 // immune response // non-traceable author statement /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from direct assay /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0042744 // hydrogen peroxide catabolic process // inferred from direct assay /// 0042744 // hydrogen peroxide catabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from electronic annotation","0004601 // peroxidase activity // inferred from direct assay /// 0004601 // peroxidase activity // inferred from electronic annotation /// 0005152 // interleukin-1 receptor antagonist activity // non-traceable author statement /// 0005201 // extracellular matrix structural constituent // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0020037 // heme binding // inferred from direct assay /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:1636854-1640836 (-) // 95.59 // p25.3"]
["11727297_a_at",-0.4921379,0.11423683,0.097192764,-0.03206253,-0.36417866,0.03206253,0.9681711,0.9111334,1.019473,0.027823506,1.019473,"up","TGFB3",7043,"0000187 // activation of MAPK activity // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from direct assay /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from sequence or structural similarity /// 0002576 // platelet degranulation // traceable author statement /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from sequence or structural similarity /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0007184 // SMAD protein import into nucleus // inferred from electronic annotation /// 0007435 // salivary gland morphogenesis // inferred from expression pattern /// 0007565 // female pregnancy // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008156 // negative regulation of DNA replication // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0009790 // embryo development // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from direct assay /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from electronic annotation /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from sequence or structural similarity /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from electronic annotation /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from sequence or structural similarity /// 0010936 // negative regulation of macrophage cytokine production // inferred from direct assay /// 0016049 // cell growth // inferred from electronic annotation /// 0022601 // menstrual cycle phase // inferred from expression pattern /// 0030168 // platelet activation // traceable author statement /// 0030501 // positive regulation of bone mineralization // inferred from expression pattern /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0030879 // mammary gland development // inferred from electronic annotation /// 0030879 // mammary gland development // inferred from sequence or structural similarity /// 0032570 // response to progesterone stimulus // inferred from direct assay /// 0032967 // positive regulation of collagen biosynthetic process // inferred from mutant phenotype /// 0034616 // response to laminar fluid shear stress // inferred from electronic annotation /// 0040007 // growth // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation /// 0042476 // odontogenesis // non-traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from sequence or structural similarity /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0043932 // ossification involved in bone remodeling // inferred from expression pattern /// 0045216 // cell-cell junction organization // inferred from direct assay /// 0045740 // positive regulation of DNA replication // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0048286 // lung alveolus development // inferred from electronic annotation /// 0048286 // lung alveolus development // inferred from sequence or structural similarity /// 0048565 // digestive tract development // inferred from electronic annotation /// 0048702 // embryonic neurocranium morphogenesis // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0050714 // positive regulation of protein secretion // inferred from direct assay /// 0051491 // positive regulation of filopodium assembly // inferred from electronic annotation /// 0051491 // positive regulation of filopodium assembly // inferred from sequence or structural similarity /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0060021 // palate development // inferred from electronic annotation /// 0060021 // palate development // inferred from sequence or structural similarity /// 0060325 // face morphogenesis // inferred from electronic annotation /// 0060325 // face morphogenesis // inferred from mutant phenotype /// 0060364 // frontal suture morphogenesis // inferred from electronic annotation /// 0060391 // positive regulation of SMAD protein import into nucleus // inferred from electronic annotation /// 0060391 // positive regulation of SMAD protein import into nucleus // inferred from sequence or structural similarity /// 0070483 // detection of hypoxia // inferred from direct assay /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred by curator /// 0009986 // cell surface // inferred from electronic annotation /// 0030141 // secretory granule // inferred from electronic annotation /// 0030315 // T-tubule // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0043025 // neuronal cell body // inferred from electronic annotation","0005114 // type II transforming growth factor beta receptor binding // inferred from direct assay /// 0005114 // type II transforming growth factor beta receptor binding // inferred from physical interaction /// 0005160 // transforming growth factor beta receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation /// 0034713 // type I transforming growth factor beta receptor binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0050431 // transforming growth factor beta binding // inferred from direct assay","chr14:76424441-76448309 (-) // 95.76 // q24.3"]
["11759734_at",-0.14872885,-0.1326983,0.037359476,0.1607275,0.32866716,-0.037359238,0.4124044,0.12851788,-1.17449,-0.2320344,1.17449,"down","BLZF1",8548,"0001558 // regulation of cell growth // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007030 // Golgi organization // inferred from direct assay /// 0008283 // cell proliferation // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0043001 // Golgi to plasma membrane protein transport // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005796 // Golgi lumen // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0019899 // enzyme binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr1:169337227-169346619 (+) // 99.3 // q24.2"]
["11754913_a_at",0.20904827,0.003545761,0.24948883,-0.003545761,-0.20888853,-0.17159414,0.24672626,0.046348274,1.2159106,0.2820371,1.2159106,"up","TRPS1",7227,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001501 // skeletal system development // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006607 // NLS-bearing substrate import into nucleus // traceable author statement /// 0032330 // regulation of chondrocyte differentiation // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:116426129-116616688 (-) // 95.89 // q23.3"]
["11762201_x_at",-0.53005314,-0.10258627,0.176023,-0.27441168,0.10258627,0.19921494,0.8054145,0.5554751,-1.1183218,-0.16133535,1.1183218,"down","CDHR4",389118,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr3:49835664-49837268 (-) // 75.0 // p21.31"]
["11738523_a_at",-0.39663076,-0.16022205,0.07252979,-0.02182436,0.02182436,0.21653318,0.51645464,0.20382786,-1.1757805,-0.2336188,1.1757805,"down","NLRP3",114548,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // non-traceable author statement /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0006952 // defense response // traceable author statement /// 0006954 // inflammatory response // inferred from mutant phenotype /// 0007165 // signal transduction // non-traceable author statement /// 0009595 // detection of biotic stimulus // traceable author statement /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0032621 // interleukin-18 production // inferred from electronic annotation /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0042347 // negative regulation of NF-kappaB import into nucleus // inferred from direct assay /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0050701 // interleukin-1 secretion // inferred from electronic annotation /// 0050718 // positive regulation of interleukin-1 beta secretion // inferred from direct assay /// 0050728 // negative regulation of inflammatory response // inferred from mutant phenotype /// 0051259 // protein oligomerization // traceable author statement /// 0051607 // defense response to virus // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0042834 // peptidoglycan binding // traceable author statement","chr1:247581350-247612404 (+) // 87.98 // q44"]
["11716657_at",-0.18972683,-0.05973053,-0.24693394,0.0768199,0.05973053,0.23117304,0.16540213,0.020724239,-1.2209789,-0.28803822,1.2209789,"down","TRAF4",9618,"0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007585 // respiratory gaseous exchange // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030323 // respiratory tube development // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from direct assay /// 0046330 // positive regulation of JNK cascade // inferred from direct assay /// 0090073 // positive regulation of protein homodimerization activity // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0031996 // thioesterase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050699 // WW domain binding // inferred from physical interaction","chr17:27071001-27077974 (+) // 95.09 // q11.2"]
["11749496_a_at",0.0024824142,0.07729626,-0.0024824142,-0.08189678,-0.08846092,0.025169373,0.4784557,0.17447965,1.052749,0.07416156,1.052749,"up","CUX1",1523,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0000301 // retrograde transport, vesicle recycling within Golgi // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006891 // intra-Golgi vesicle-mediated transport // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0042491 // auditory receptor cell differentiation // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030173 // integral to Golgi membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0030674 // protein binding, bridging // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr7:101459287-101926770 (+) // 99.61 // q22.1"]
["11726505_at",-0.043970585,0.043970585,0.07717323,-0.11525488,-0.047683716,0.2931466,0.9641709,0.8995151,-1.012329,-0.017678207,1.012329,"down","FUT9",10690,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006486 // protein glycosylation // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0036065 // fucosylation // traceable author statement /// 0036065 // fucosylation // inferred from electronic annotation /// 0042355 // L-fucose catabolic process // non-traceable author statement","0005794 // Golgi apparatus // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0008417 // fucosyltransferase activity // traceable author statement /// 0008417 // fucosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0017083 // 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase activity // inferred from electronic annotation /// 0046920 // alpha-(1->3)-fucosyltransferase activity // traceable author statement /// 0046920 // alpha-(1->3)-fucosyltransferase activity // inferred from electronic annotation","chr6:96463844-96663488 (+) // 90.23 // q16.1"]
["11747812_a_at",0.008693218,0.028505325,-0.008693218,-0.05058098,-0.057854652,0.06322861,0.818255,0.5781662,1.017177,0.024570726,1.017177,"up","EGR3",1960,"0001938 // positive regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0002042 // cell migration involved in sprouting angiogenesis // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007274 // neuromuscular synaptic transmission // inferred from electronic annotation /// 0007422 // peripheral nervous system development // inferred from electronic annotation /// 0007517 // muscle organ development // traceable author statement /// 0007623 // circadian rhythm // traceable author statement /// 0035767 // endothelial cell chemotaxis // inferred from mutant phenotype /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:22547555-22549927 (-) // 97.42 // p21.3"]
["11740130_a_at",-0.032827377,-0.050830364,-0.18445063,0.032827377,0.15544033,0.14001894,0.20466077,0.031791925,-1.1477419,-0.19879827,1.1477419,"down","CACNA1B",774,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0008016 // regulation of heart contraction // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0048265 // response to pain // inferred from electronic annotation /// 0051899 // membrane depolarization // traceable author statement /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // traceable author statement /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005891 // voltage-gated calcium channel complex // inferred from electronic annotation /// 0005891 // voltage-gated calcium channel complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005245 // voltage-gated calcium channel activity // inferred from electronic annotation /// 0005245 // voltage-gated calcium channel activity // traceable author statement /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction","chr9:140772240-141019075 (+) // 95.99 // q34.3"]
["11719846_a_at",0.20759058,0.009337902,-0.054012775,0.0069322586,-0.0069322586,-0.12702751,0.65680134,0.34115908,1.069286,0.09664776,1.069286,"up","TFPT",29844,"0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0031011 // Ino80 complex // inferred from direct assay","0003677 // DNA binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction","chr19:54610326-54619055 (-) // 95.68 // q13.42"]
["11733181_at",0.07232833,-0.03812337,0.05086875,0.03812337,-0.18834019,-0.21426892,0.45870447,0.16008753,1.1094565,0.14985316,1.1094565,"up","ETV1",2115,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0048935 // peripheral nervous system neuron development // traceable author statement","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr7:13930852-14029291 (-) // 92.33 // p21.2"]
["11729986_a_at",-0.08994651,0.058480978,0.04523158,0.011433363,-0.011433363,-0.061472893,0.85960186,0.65527785,1.0175359,0.02507973,1.0175359,"up","ROBO2",6092,"0001656 // metanephros development // inferred from sequence or structural similarity /// 0001657 // ureteric bud development // inferred from mutant phenotype /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // inferred from sequence or structural similarity /// 0007411 // axon guidance // non-traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007417 // central nervous system development // non-traceable author statement /// 0007420 // brain development // inferred from expression pattern /// 0016199 // axon midline choice point recognition // inferred from sequence or structural similarity /// 0021891 // olfactory bulb interneuron development // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031290 // retinal ganglion cell axon guidance // inferred from sequence or structural similarity /// 0032870 // cellular response to hormone stimulus // inferred from expression pattern /// 0050772 // positive regulation of axonogenesis // inferred from direct assay /// 0050925 // negative regulation of negative chemotaxis // inferred from direct assay /// 0051964 // negative regulation of synapse assembly // inferred from sequence or structural similarity /// 0061364 // apoptotic process involved in luteolysis // inferred from expression pattern","0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030673 // axolemma // inferred from sequence or structural similarity","0005515 // protein binding // inferred from physical interaction /// 0008046 // axon guidance receptor activity // inferred from sequence or structural similarity /// 0008046 // axon guidance receptor activity // non-traceable author statement /// 0042802 // identical protein binding // inferred from direct assay","chr3:77089245-77696661 (+) // 99.37 // p12.3"]
["11763565_x_at",-0.08635759,-0.09129143,0.106087685,-0.026379108,0.026379108,0.3269987,0.66920334,0.35730135,-1.0964601,-0.13285331,1.0964601,"down","ATP10B",23120,"0006812 // cation transport // inferred from electronic annotation /// 0015914 // phospholipid transport // inferred from electronic annotation /// 0045332 // phospholipid translocation // non-traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004012 // phospholipid-translocating ATPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:160060261-160279219 (-) // 82.56 // q34"]
["11737041_a_at",0.07522106,-0.22739792,-0.11850834,0.09246826,0.13772774,-0.07522106,0.5855228,0.26538482,-1.1033471,-0.14188667,1.1033471,"down","PHLDB2",90102,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0004629 // phospholipase C activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008081 // phosphoric diester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr3:111578567-111695362 (+) // 99.26 // q13.2"]
["11724971_a_at",0.08256364,-0.3151543,-0.21713161,0.08905339,-0.08256364,0.08771634,0.5621706,0.2430439,-1.1339126,-0.1813094,1.1339126,"down","FLT1",2321,"0000186 // activation of MAPKK activity // inferred from electronic annotation /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001569 // patterning of blood vessels // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0002040 // sprouting angiogenesis // inferred from electronic annotation /// 0002548 // monocyte chemotaxis // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006935 // chemotaxis // inferred from electronic annotation /// 0006940 // regulation of smooth muscle contraction // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007565 // female pregnancy // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0010863 // positive regulation of phospholipase C activity // inferred from mutant phenotype /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // inferred from mutant phenotype /// 0016477 // cell migration // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0030522 // intracellular receptor mediated signaling pathway // inferred from electronic annotation /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // inferred from direct assay /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from direct assay /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from direct assay /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from mutant phenotype /// 0038084 // vascular endothelial growth factor signaling pathway // traceable author statement /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from electronic annotation /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0043410 // positive regulation of MAPK cascade // inferred from direct assay /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from mutant phenotype /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from direct assay /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from mutant phenotype /// 0048010 // vascular endothelial growth factor receptor signaling pathway // traceable author statement /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from electronic annotation /// 0048514 // blood vessel morphogenesis // inferred from sequence or structural similarity /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0048598 // embryonic morphogenesis // inferred from sequence or structural similarity /// 0048598 // embryonic morphogenesis // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // traceable author statement /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from direct assay /// 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from mutant phenotype /// 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from electronic annotation /// 0005021 // vascular endothelial growth factor-activated receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from physical interaction /// 0019838 // growth factor binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation","chr13:28874483-29069265 (-) // 97.77 // q12.2"]
["11764175_at",-0.40006638,-0.06632471,0.123885155,-0.24445915,0.06632471,0.2750454,0.7922578,0.533119,-1.1068597,-0.14647233,1.1068597,"down","","","","","","chr16:54885551-54886170 (-) // 79.28 // q12.2"]
["11739728_a_at",-0.0013685226,-0.05044937,0.0013685226,0.16521072,-0.0194273,0.00961113,0.63287413,0.31477785,-1.0487092,-0.06861462,1.0487092,"down","RECQL",5965,"0000733 // DNA strand renaturation // inferred from direct assay /// 0006260 // DNA replication // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006310 // DNA recombination // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // inferred from direct assay /// 0032508 // DNA duplex unwinding // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0000739 // DNA strand annealing activity // inferred from direct assay /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003678 // DNA helicase activity // inferred from direct assay /// 0003678 // DNA helicase activity // traceable author statement /// 0004003 // ATP-dependent DNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0043140 // ATP-dependent 3'-5' DNA helicase activity // inferred from electronic annotation","chr12:21621844-21654603 (-) // 87.18 // p12.1"]
["11752902_a_at",-0.31237364,0.004345894,0.048389196,-0.01646781,-0.0043456554,0.16417527,0.6657501,0.35220936,-1.0975856,-0.1343334,1.0975856,"down","PLP1",5354,"0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0008366 // axon ensheathment // traceable author statement /// 0008366 // axon ensheathment // inferred from electronic annotation /// 0010001 // glial cell differentiation // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0022010 // central nervous system myelination // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation /// 0042759 // long-chain fatty acid biosynthetic process // inferred from electronic annotation /// 0048469 // cell maturation // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043209 // myelin sheath // inferred from electronic annotation /// 0043218 // compact myelin // inferred from electronic annotation","0005198 // structural molecule activity // traceable author statement /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0019911 // structural constituent of myelin sheath // inferred from electronic annotation","chrX:103031801-103046078 (+) // 100.0 // q22.2"]
["11738848_at",-0.04399371,0.17783546,0.004454136,-0.004454136,-0.120203495,0.16277266,0.91288733,0.76892763,1.0234166,0.03339359,1.0234166,"up","GFRAL",389400,"0006916 // anti-apoptosis // inferred from electronic annotation /// 0031098 // stress-activated protein kinase signaling cascade // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr6:55192266-55267291 (+) // 79.76 // p12.1"]
["11748343_a_at",0.34988022,0.19124603,0.09738064,-0.09738064,-0.31186962,-0.25140572,0.1228426,0.01132057,1.3500887,0.4330542,1.3500887,"up","RABL5",64792,"0007264 // small GTPase mediated signal transduction // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr7:100958359-100965256 (-) // 99.2 // q22.1"]
["11734497_at",-0.04056835,-0.080530405,0.040568113,-0.14796019,0.122143984,0.14926958,0.7950881,0.53902906,-1.0482585,-0.06799459,1.0482585,"down","C6orf222",389384,"","","","chr6:36283533-36304662 (-) // 83.29 // p21.31"]
["11727276_at",-0.14373684,0.21276379,-0.10044956,-0.0764966,0.0764966,0.24741077,0.80752915,0.5594358,-1.0665448,-0.092944525,1.0665448,"down","ZNF77",58492,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:2933215-2944969 (-) // 97.19 // p13.3"]
["11728169_s_at",-0.052030563,0.22673321,0.13327456,0.004196167,-0.004196167,-0.0101156235,0.5857438,0.26571724,1.0762632,0.10603092,1.0762632,"up","LCA5",167691,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0035085 // cilium axoneme // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr6:80194708-80247147 (-) // 94.58 // q14.1"]
["11738357_x_at",-0.014886856,-0.14429092,0.014886856,-0.07070255,0.051208496,0.06152439,0.6964271,0.39165932,-1.0439894,-0.06210709,1.0439894,"down","OR4N3P",390539,"","","","chr14:20295847-20296539 (+) // 95.27 // q11.2 /// chr15:22413701-22414393 (+) // 99.0 // q11.2"]
["11737612_a_at",-0.16102886,-0.06720734,0.06720734,-0.3972535,0.108034134,0.46060705,0.87629575,0.68925935,-1.079831,-0.11080554,1.079831,"down","ZDHHC21",340481,"0001942 // hair follicle development // inferred from electronic annotation /// 0018230 // peptidyl-L-cysteine S-palmitoylation // inferred from mutant phenotype /// 0018345 // protein palmitoylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046209 // nitric oxide metabolic process // traceable author statement /// 0048733 // sebaceous gland development // inferred from electronic annotation /// 0050999 // regulation of nitric-oxide synthase activity // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0016409 // palmitoyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:14617033-14693469 (-) // 93.85 // p22.3"]
["11740070_a_at",-0.013687849,-0.0820899,0.00528574,0.0061917305,0.04363203,-0.0052855015,0.52710384,0.21243155,-1.0316904,-0.045010038,1.0316904,"down","KRT222",125113,"","0005882 // intermediate filament // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation","chr17:38811873-38821429 (-) // 99.54 // q21.2"]
["11719747_a_at",-0.058550835,-0.5091882,-0.31036043,0.61070824,0.17070961,0.058550835,0.26928654,0.05477292,-1.4872935,-0.57268935,1.4872935,"down","NF2",4771,"0001707 // mesoderm formation // inferred from electronic annotation /// 0001953 // negative regulation of cell-matrix adhesion // traceable author statement /// 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0007398 // ectoderm development // inferred from electronic annotation /// 0008156 // negative regulation of DNA replication // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0014010 // Schwann cell proliferation // inferred from mutant phenotype /// 0022408 // negative regulation of cell-cell adhesion // inferred from direct assay /// 0030036 // actin cytoskeleton organization // inferred from mutant phenotype /// 0030336 // negative regulation of cell migration // traceable author statement /// 0035330 // regulation of hippo signaling cascade // inferred from mutant phenotype /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042518 // negative regulation of tyrosine phosphorylation of Stat3 protein // inferred from direct assay /// 0042524 // negative regulation of tyrosine phosphorylation of Stat5 protein // inferred from direct assay /// 0043409 // negative regulation of MAPK cascade // inferred from electronic annotation /// 0045216 // cell-cell junction organization // inferred from electronic annotation /// 0046426 // negative regulation of JAK-STAT cascade // inferred from direct assay /// 0051496 // positive regulation of stress fiber assembly // inferred from mutant phenotype /// 0070306 // lens fiber cell differentiation // inferred from electronic annotation","0001726 // ruffle // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019898 // extrinsic to membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0030864 // cortical actin cytoskeleton // inferred from electronic annotation /// 0031527 // filopodium membrane // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation","chr22:29999543-30094589 (+) // 83.43 // q12.2"]
["11758860_at",-0.12018204,0.4441347,-0.1364801,0.11911726,-0.024981499,0.024981499,0.9688538,0.912835,1.0159189,0.022785168,1.0159189,"up","HNRNPU",3192,"0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0070934 // CRD-mediated mRNA stabilization // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030530 // heterogeneous nuclear ribonucleoprotein complex // traceable author statement /// 0070937 // CRD-mediated mRNA stability complex // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation","chr1:245012757-245028025 (-) // 97.44 // q44"]
["11730987_at",-0.14556527,0.06351709,-0.025457859,-0.07321334,0.07251763,0.025457859,0.82169557,0.5846196,-1.0310322,-0.044089396,1.0310322,"down","SBSPON",157869,"0006955 // immune response // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay","0005044 // scavenger receptor activity // inferred from electronic annotation /// 0030247 // polysaccharide binding // inferred from electronic annotation","chr8:73976321-74005507 (-) // 87.27 // q21.11"]
["11726356_at",0.11175442,0.048376083,0.16010141,-0.048376083,-0.114797115,-0.19702387,0.1339006,0.013525791,1.1702442,0.22680964,1.1702442,"up","ENPP1",5167,"0006091 // generation of precursor metabolites and energy // inferred from direct assay /// 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006771 // riboflavin metabolic process // traceable author statement /// 0006796 // phosphate-containing compound metabolic process // inferred from direct assay /// 0006955 // immune response // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009143 // nucleoside triphosphate catabolic process // inferred from direct assay /// 0030279 // negative regulation of ossification // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0030500 // regulation of bone mineralization // inferred by curator /// 0030505 // inorganic diphosphate transport // inferred from direct assay /// 0030643 // cellular phosphate ion homeostasis // inferred from direct assay /// 0030730 // sequestering of triglyceride // inferred from direct assay /// 0031214 // biomineral tissue development // inferred from electronic annotation /// 0031953 // negative regulation of protein autophosphorylation // inferred from direct assay /// 0032869 // cellular response to insulin stimulus // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0045599 // negative regulation of fat cell differentiation // inferred from direct assay /// 0045719 // negative regulation of glycogen biosynthetic process // inferred from direct assay /// 0046325 // negative regulation of glucose import // inferred from direct assay /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from direct assay /// 0046849 // bone remodeling // inferred from electronic annotation /// 0050427 // 3'-phosphoadenosine 5'-phosphosulfate metabolic process // inferred from direct assay","0005615 // extracellular space // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016323 // basolateral plasma membrane // non-traceable author statement /// 0016323 // basolateral plasma membrane // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004528 // phosphodiesterase I activity // inferred from electronic annotation /// 0004551 // nucleotide diphosphatase activity // inferred from direct assay /// 0004551 // nucleotide diphosphatase activity // traceable author statement /// 0004551 // nucleotide diphosphatase activity // inferred from electronic annotation /// 0005044 // scavenger receptor activity // inferred from electronic annotation /// 0005158 // insulin receptor binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030247 // polysaccharide binding // inferred from electronic annotation /// 0035529 // NADH pyrophosphatase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047429 // nucleoside-triphosphate diphosphatase activity // inferred from direct assay /// 0050656 // 3'-phosphoadenosine 5'-phosphosulfate binding // inferred by curator","chr6:132129157-132216452 (+) // 69.28 // q23.2"]
["11732527_a_at",-0.08592248,0.108885765,-0.0077955723,-0.30055976,0.009488344,0.0077955723,0.73507506,0.44518608,1.0713881,0.09948121,1.0713881,"up","TBX5",6910,"0002009 // morphogenesis of an epithelium // inferred from electronic annotation /// 0003166 // bundle of His development // inferred from electronic annotation /// 0003181 // atrioventricular valve morphogenesis // inferred from electronic annotation /// 0003197 // endocardial cushion development // inferred from electronic annotation /// 0003218 // cardiac left ventricle formation // inferred from sequence or structural similarity /// 0003218 // cardiac left ventricle formation // inferred from electronic annotation /// 0003229 // ventricular cardiac muscle tissue development // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from sequence or structural similarity /// 0003281 // ventricular septum development // inferred from electronic annotation /// 0003283 // atrial septum development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006917 // induction of apoptosis // inferred from direct assay /// 0007267 // cell-cell signaling // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0007507 // heart development // inferred from direct assay /// 0007507 // heart development // inferred from mutant phenotype /// 0007507 // heart development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0010467 // gene expression // traceable author statement /// 0010719 // negative regulation of epithelial to mesenchymal transition // traceable author statement /// 0030324 // lung development // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from mutant phenotype /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from direct assay /// 0035115 // embryonic forelimb morphogenesis // inferred from electronic annotation /// 0035117 // embryonic arm morphogenesis // inferred from mutant phenotype /// 0035136 // forelimb morphogenesis // inferred from mutant phenotype /// 0035136 // forelimb morphogenesis // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051891 // positive regulation of cardioblast differentiation // inferred from direct assay /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0060039 // pericardium development // inferred from direct assay /// 0060044 // negative regulation of cardiac muscle cell proliferation // inferred from direct assay /// 0060045 // positive regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0060980 // cell migration involved in coronary vasculogenesis // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement","0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay","chr12:114791731-114843968 (-) // 93.28 // q24.21"]
["11736918_x_at",-0.04714918,-0.04714918,0.012049675,-0.012049913,0.13325858,0.081715584,0.3859994,0.11255205,-1.0681081,-0.09505764,1.0681081,"down","HIST1H2AH",85235,"0006334 // nucleosome assembly // inferred from electronic annotation","0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr6:27114860-27115345 (+) // 98.58 // p22.1"]
["11741657_a_at",0.053542614,0.14893103,0.017917156,-0.017917156,-0.16913843,-0.23970461,0.24942733,0.047335394,1.1612809,0.21571694,1.1612809,"up","SYDE1",85360,"0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0032862 // activation of Rho GTPase activity // inferred from sequence or structural similarity /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // inferred from sequence or structural similarity","chr19:15218213-15225789 (+) // 99.85 // p13.12"]
["11739312_a_at",0.04330921,-0.04563713,-0.013027191,0.053302765,0.013027191,-0.13649082,0.9201148,0.78725743,1.0127434,0.018268617,1.0127434,"up","HUS1",3364,"0000075 // cell cycle checkpoint // traceable author statement /// 0000077 // DNA damage checkpoint // inferred from mutant phenotype /// 0000077 // DNA damage checkpoint // inferred from electronic annotation /// 0000077 // DNA damage checkpoint // traceable author statement /// 0000724 // double-strand break repair via homologous recombination // inferred from electronic annotation /// 0001932 // regulation of protein phosphorylation // inferred from electronic annotation /// 0006260 // DNA replication // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0008156 // negative regulation of DNA replication // inferred from electronic annotation /// 0009411 // response to UV // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0031575 // mitotic cell cycle G1/S transition checkpoint // inferred from electronic annotation /// 0071479 // cellular response to ionizing radiation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr7:48002884-48019252 (-) // 78.74 // p12.3"]
["11759481_at",-0.11817074,-0.09094715,-0.04848337,0.04848337,0.19992304,0.23846626,0.1435792,0.015603464,-1.1876897,-0.24815792,1.1876897,"down","COPB1",1315,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // traceable author statement /// 0006891 // intra-Golgi vesicle-mediated transport // inferred from sequence or structural similarity /// 0006891 // intra-Golgi vesicle-mediated transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0048205 // COPI coating of Golgi vesicle // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005798 // Golgi-associated vesicle // traceable author statement /// 0005798 // Golgi-associated vesicle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation /// 0030126 // COPI vesicle coat // inferred from sequence or structural similarity /// 0030126 // COPI vesicle coat // inferred from electronic annotation /// 0030137 // COPI-coated vesicle // inferred from electronic annotation /// 0030663 // COPI coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr11:14477750-14521398 (-) // 90.67 // p15.2"]
["11738898_a_at",-0.13231468,0.010910034,0.14318538,-0.15328002,-0.010910273,0.11972737,0.9477093,0.8533158,1.0154233,0.022081267,1.0154233,"up","CLEC4C",170482,"0045087 // innate immune response // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0030246 // carbohydrate binding // inferred from electronic annotation","chr12:7882010-7900074 (-) // 67.46 // p13.31"]
["11748251_a_at",-0.17275238,-0.110569954,-0.055708885,0.08838463,0.09186554,0.055708885,0.08975946,0.0058222353,-1.1420797,-0.19166334,1.1420797,"down","USP34",9736,"0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0071108 // protein K48-linked deubiquitination // inferred from direct assay /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from direct assay","","0004197 // cysteine-type endopeptidase activity // inferred from mutant phenotype /// 0004221 // ubiquitin thiolesterase activity // inferred from direct assay /// 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr2:61414599-61434023 (-) // 97.41 // p15"]
["11729218_a_at",-0.05702734,-0.020048141,-0.106684685,0.39241123,0.2870636,0.020048618,0.28262836,0.06060448,-1.2263986,-0.29442793,1.2263986,"down","GCLC",2729,"0000096 // sulfur amino acid metabolic process // traceable author statement /// 0006534 // cysteine metabolic process // inferred from direct assay /// 0006536 // glutamate metabolic process // inferred from direct assay /// 0006749 // glutathione metabolic process // inferred from electronic annotation /// 0006750 // glutathione biosynthetic process // inferred from direct assay /// 0006750 // glutathione biosynthetic process // inferred from electronic annotation /// 0006750 // glutathione biosynthetic process // inferred from mutant phenotype /// 0006750 // glutathione biosynthetic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0006916 // anti-apoptosis // inferred from direct assay /// 0006979 // response to oxidative stress // inferred from direct assay /// 0009408 // response to heat // inferred from direct assay /// 0009410 // response to xenobiotic stimulus // inferred from electronic annotation /// 0009725 // response to hormone stimulus // inferred from direct assay /// 0019852 // L-ascorbic acid metabolic process // inferred from electronic annotation /// 0031397 // negative regulation of protein ubiquitination // inferred from electronic annotation /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045454 // cell redox homeostasis // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0046685 // response to arsenic-containing substance // inferred from electronic annotation /// 0050880 // regulation of blood vessel size // inferred from mutant phenotype /// 0051409 // response to nitrosative stress // inferred from electronic annotation /// 0051900 // regulation of mitochondrial depolarization // inferred from electronic annotation","0005737 // cytoplasm // not recorded /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0017109 // glutamate-cysteine ligase complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0004357 // glutamate-cysteine ligase activity // inferred from direct assay /// 0004357 // glutamate-cysteine ligase activity // inferred from mutant phenotype /// 0004357 // glutamate-cysteine ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016595 // glutamate binding // inferred from direct assay /// 0016874 // ligase activity // inferred from electronic annotation /// 0043531 // ADP binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0050662 // coenzyme binding // inferred from physical interaction","chr6:53362138-53409839 (-) // 97.62 // p12.1"]
["11749471_a_at",-0.41675782,-0.008122921,0.065304756,-0.20491147,0.008122921,0.050716877,0.8797782,0.69619447,-1.0505669,-0.07116805,1.0505669,"down","MCF2",4168,"0006915 // apoptotic process // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0016358 // dendrite development // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation","chrX:138664455-138790369 (-) // 99.52 // q27.1"]
["11724902_a_at",0.49182415,-0.0045371056,0.0045375824,0.3143263,-0.14076471,-0.16154766,0.7829277,0.51787966,1.1172383,0.15993692,1.1172383,"up","MAP3K14",9020,"0000165 // MAPK cascade // inferred from electronic annotation /// 0000186 // activation of MAPKK activity // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006955 // immune response // inferred from sequence or structural similarity /// 0006955 // immune response // inferred from electronic annotation /// 0007249 // I-kappaB kinase/NF-kappaB cascade // inferred from sequence or structural similarity /// 0007249 // I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0031295 // T cell costimulation // traceable author statement /// 0038061 // NIK/NF-kappaB cascade // inferred from sequence or structural similarity /// 0038061 // NIK/NF-kappaB cascade // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from reviewed computational analysis /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004704 // NF-kappaB-inducing kinase activity // inferred from sequence or structural similarity /// 0004704 // NF-kappaB-inducing kinase activity // inferred from electronic annotation /// 0004709 // MAP kinase kinase kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr17:43340490-43394511 (-) // 97.72 // q21.31"]
["11753161_a_at",-0.30694103,0.06469345,-0.0027461052,-0.22157955,0.16774607,0.002746582,0.88552904,0.7079392,-1.0458207,-0.064635545,1.0458207,"down","HFE",3077,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // inferred from electronic annotation /// 0006461 // protein complex assembly // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006826 // iron ion transport // traceable author statement /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0006898 // receptor-mediated endocytosis // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0007565 // female pregnancy // inferred from electronic annotation /// 0010106 // cellular response to iron ion starvation // inferred from electronic annotation /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0042446 // hormone biosynthetic process // inferred from electronic annotation /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0060586 // multicellular organismal iron ion homeostasis // inferred from electronic annotation","0005737 // cytoplasm // traceable author statement /// 0005769 // early endosome // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from direct assay /// 0042612 // MHC class I protein complex // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation /// 0045178 // basal part of cell // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0055037 // recycling endosome // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr6:26087664-26094781 (+) // 99.74 // p22.2"]
["11764055_at",-0.023016453,0.023015976,0.18669224,-0.08374596,0.2653227,-0.16989422,0.8873365,0.71264523,1.0412644,0.058336467,1.0412644,"up","FMR1",2332,"0006810 // transport // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0045947 // negative regulation of translational initiation // inferred from sequence or structural similarity /// 0051028 // mRNA transport // inferred from electronic annotation","0005625 // soluble fraction // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // traceable author statement /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005845 // mRNA cap binding complex // inferred from sequence or structural similarity /// 0042788 // polysomal ribosome // traceable author statement","0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0003729 // mRNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chrX:147024803-147030058 (+) // 89.43 // q27.3"]
["11744826_x_at",-0.008003235,-0.010416985,-0.04381466,0.13270187,0.08439255,0.008003235,0.29523543,0.06576527,-1.0686412,-0.09577753,1.0686412,"down","WBSCR22",114049,"0008152 // metabolic process // inferred from electronic annotation /// 0032259 // methylation // non-traceable author statement /// 0032259 // methylation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0008168 // methyltransferase activity // non-traceable author statement /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr7:73097914-73112541 (+) // 80.32 // q11.23"]
["11754770_a_at",0.0047192574,-0.0047187805,0.04934883,-0.0139222145,0.018523693,-0.014932156,0.68364537,0.37551707,1.0138845,0.019893374,1.0138845,"up","ZNF646",9726,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:31087222-31094826 (+) // 99.72 // p11.2"]
["11728477_at",-0.055336,-0.22846937,-0.091014385,0.3174019,0.07794571,0.055336,0.25707322,0.049946994,-1.2101347,-0.2751677,1.2101347,"down","CXCL3",2921,"0006935 // chemotaxis // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0030593 // neutrophil chemotaxis // inferred from sequence or structural similarity","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0008009 // chemokine activity // inferred from sequence or structural similarity /// 0008009 // chemokine activity // inferred from electronic annotation","chr4:74902305-74904523 (-) // 91.73 // q13.3"]
["11747693_a_at",-0.035969734,0.0105896,0.08655691,0.00013637543,-0.015371323,-0.00013637543,0.7833678,0.5183988,1.0178437,0.02551607,1.0178437,"up","MME",4311,"0001822 // kidney development // inferred from expression pattern /// 0006508 // proteolysis // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0006518 // peptide metabolic process // inferred from sequence or structural similarity /// 0006518 // peptide metabolic process // inferred from electronic annotation /// 0019233 // sensory perception of pain // inferred from sequence or structural similarity /// 0019233 // sensory perception of pain // inferred from electronic annotation /// 0046449 // creatinine metabolic process // inferred from mutant phenotype /// 0050435 // beta-amyloid metabolic process // inferred from sequence or structural similarity /// 0050435 // beta-amyloid metabolic process // inferred from electronic annotation /// 0071345 // cellular response to cytokine stimulus // inferred from direct assay /// 0071492 // cellular response to UV-A // inferred from direct assay /// 0071493 // cellular response to UV-B // inferred from direct assay /// 0090399 // replicative senescence // inferred from expression pattern","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0005903 // brush border // inferred from direct assay /// 0008021 // synaptic vesicle // inferred from sequence or structural similarity /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from sequence or structural similarity /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0044306 // neuron projection terminus // inferred from sequence or structural similarity /// 0044306 // neuron projection terminus // inferred from electronic annotation /// 0045202 // synapse // inferred from sequence or structural similarity /// 0045202 // synapse // inferred from electronic annotation","0004175 // endopeptidase activity // inferred from direct assay /// 0004175 // endopeptidase activity // inferred from mutant phenotype /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042277 // peptide binding // inferred from sequence or structural similarity /// 0042277 // peptide binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:154741912-154898638 (+) // 98.74 // q25.2"]
["11753349_a_at",-0.046616554,0.014631987,0.02772355,-0.104864836,0.1854589,-0.014631987,0.92763454,0.8050955,-1.0163573,-0.023407673,1.0163573,"down","NRG3",10718,"0001558 // regulation of cell growth // non-traceable author statement /// 0007171 // activation of transmembrane receptor protein tyrosine kinase activity // non-traceable author statement /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0030879 // mammary gland development // inferred from electronic annotation /// 0060596 // mammary placode formation // inferred from electronic annotation","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005102 // receptor binding // inferred from electronic annotation /// 0008083 // growth factor activity // non-traceable author statement /// 0008083 // growth factor activity // inferred from electronic annotation /// 0030297 // transmembrane receptor protein tyrosine kinase activator activity // non-traceable author statement /// 0030971 // receptor tyrosine kinase binding // non-traceable author statement","chr10:83635839-84733923 (+) // 90.37 // q23.1"]
["11716487_a_at",0.20952415,-0.061457634,-0.024575233,0.06296539,0.024575233,-0.08924675,0.87552655,0.68733037,1.0293492,0.0417325,1.0293492,"up","WDR59",79726,"","","","chr16:74907465-75019044 (-) // 98.1 // q23.1"]
["11741129_s_at",-0.014092445,0.003534317,0.02700615,-0.0035333633,-0.07214832,0.04679203,0.8814226,0.69983447,1.0105302,0.015112485,1.0105302,"up","CAPN2",824,"0001666 // response to hypoxia // inferred from electronic annotation /// 0001824 // blastocyst development // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0007520 // myoblast fusion // inferred from electronic annotation","0000785 // chromatin // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005626 // insoluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004198 // calcium-dependent cysteine-type endopeptidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // traceable author statement /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr1:223889253-223963718 (+) // 95.08 // q41"]
["11737627_at",-0.16653395,0.56871104,-0.012707949,0.012708187,-0.050079107,0.04414606,0.8318093,0.60197765,1.092448,0.12756461,1.092448,"up","NEK5",341676,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr13:52638904-52701801 (-) // 81.34 // q14.3"]
["11715526_s_at",0.08471298,0.14667034,0.03951168,-0.03951168,-0.20325756,-0.0686388,0.20059255,0.030585356,1.144011,0.19410095,1.144011,"up","ATP6V1G2-DDX39B /// DDX39B /// SNORD84","100532737 /// 692199 /// 7919","0000245 // spliceosomal complex assembly // inferred from direct assay /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred from genetic interaction /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // inferred from direct assay /// 0006406 // mRNA export from nucleus // inferred from genetic interaction /// 0006810 // transport // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from direct assay /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010501 // RNA secondary structure unwinding // inferred from direct assay /// 0015992 // proton transport // inferred from electronic annotation /// 0046784 // intronless viral mRNA export from host nucleus // inferred from direct assay /// 0051028 // mRNA transport // inferred from electronic annotation","0000346 // transcription export complex // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005687 // U4 snRNP // inferred from direct assay /// 0005688 // U6 snRNP // inferred from direct assay /// 0016471 // vacuolar proton-transporting V-type ATPase complex // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004004 // ATP-dependent RNA helicase activity // inferred from direct assay /// 0004004 // ATP-dependent RNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0008186 // RNA-dependent ATPase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0017070 // U6 snRNA binding // inferred from direct assay /// 0030621 // U4 snRNA binding // inferred from direct assay /// 0043008 // ATP-dependent protein binding // inferred from direct assay","chr6:31498024-31510225 (-) // 87.48 // p21.33"]
["11749257_a_at",0.16735172,-0.004676819,0.004676819,-0.038256645,0.03141594,-0.06602669,0.5919466,0.2721077,1.0570716,0.08007305,1.0570716,"up","HERPUD1",9709,"0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // inferred from expression pattern /// 0006986 // response to unfolded protein // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // inferred from electronic annotation /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr16:56966058-56977793 (+) // 92.15 // q13"]
["11725034_at",0.11350298,-0.15715265,0.004041195,0.004041195,-0.004041195,-0.11324787,0.9225423,0.7923647,1.0171599,0.024546547,1.0171599,"up","SYP",6855,"0006810 // transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from sequence or structural similarity /// 0016188 // synaptic vesicle maturation // non-traceable author statement /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from sequence or structural similarity /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048172 // regulation of short-term neuronal synaptic plasticity // inferred from sequence or structural similarity /// 0048172 // regulation of short-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048499 // synaptic vesicle membrane organization // non-traceable author statement /// 0071310 // cellular response to organic substance // inferred from electronic annotation /// 2000474 // regulation of opioid receptor signaling pathway // inferred from sequence or structural similarity","0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030285 // integral to synaptic vesicle membrane // non-traceable author statement /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0043229 // intracellular organelle // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0044306 // neuron projection terminus // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048786 // presynaptic active zone // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0005509 // calcium ion binding // non-traceable author statement /// 0015485 // cholesterol binding // inferred from direct assay /// 0017075 // syntaxin-1 binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0042169 // SH2 domain binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation","chrX:49044267-49055496 (-) // 88.76 // p11.23"]
["11753302_s_at",0.035718918,-0.007050514,0.007050514,0.032819748,-0.060688972,-0.072984695,0.590911,0.2712607,1.0320581,0.045524217,1.0320581,"up","CBR1",873,"0008152 // metabolic process // inferred from electronic annotation /// 0017144 // drug metabolic process // inferred from direct assay /// 0042373 // vitamin K metabolic process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004090 // carbonyl reductase (NADPH) activity // inferred from direct assay /// 0004090 // carbonyl reductase (NADPH) activity // inferred from electronic annotation /// 0004090 // carbonyl reductase (NADPH) activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016655 // oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor // inferred from direct assay /// 0047021 // 15-hydroxyprostaglandin dehydrogenase (NADP+) activity // inferred from electronic annotation /// 0050221 // prostaglandin-E2 9-reductase activity // inferred from electronic annotation","chr21:37442336-37445272 (+) // 98.24 // q22.12"]
["11717316_x_at",-0.01229763,-0.10255718,-0.1292057,0.118844986,0.01229763,0.016555786,0.27683365,0.05815216,-1.0947385,-0.13058627,1.0947385,"down","RPL38",6169,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // traceable author statement","chr17:72199817-72206378 (+) // 51.81 // q25.1"]
["11755699_a_at",0.16096592,0.047660828,-0.39498258,-0.36802626,-0.047660828,0.24202108,0.995112,0.9870286,-1.0029362,-0.0042298976,1.0029362,"down","ACCSL",390110,"0009058 // biosynthetic process // inferred from electronic annotation /// 0042218 // 1-aminocyclopropane-1-carboxylate biosynthetic process // inferred from electronic annotation","","0003824 // catalytic activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016847 // 1-aminocyclopropane-1-carboxylate synthase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation","chr11:44069564-44081500 (+) // 99.89 // p11.2"]
["11762647_at",0.096524715,0.0038208961,-0.007317543,0.2552328,-0.0038208961,-0.020310879,0.85884243,0.6537322,-1.032416,-0.046024386,1.032416,"down",0.2552328,-0.0038208961,-0.020310879,0.096524715,0.0038208961,-0.007317543]
["11749397_a_at",0.1025877,0.08040857,0.107497215,-0.0804081,-0.31759262,-0.1217165,0.16814198,0.021428358,1.2058666,0.27007028,1.2058666,"up","YWHAG",7532,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006469 // negative regulation of protein kinase activity // non-traceable author statement /// 0006605 // protein targeting // inferred from electronic annotation /// 0009966 // regulation of signal transduction // non-traceable author statement /// 0045664 // regulation of neuron differentiation // inferred from mutant phenotype /// 0048167 // regulation of synaptic plasticity // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005080 // protein kinase C binding // inferred from physical interaction /// 0005159 // insulin-like growth factor receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008426 // protein kinase C inhibitor activity // non-traceable author statement /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0030971 // receptor tyrosine kinase binding // inferred from electronic annotation","chr7:75958814-75988306 (-) // 100.0 // q11.23"]
["11722011_a_at",-0.21867776,0.09374094,-0.12940717,0.056191206,0.040860653,-0.040860415,0.6633923,0.34897432,-1.0743855,-0.10351177,1.0743855,"down","GIMAP4",55303,"","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr7:150264364-150271043 (+) // 93.06 // q36.1"]
["11719166_x_at",0.46609068,0.00071048737,-0.049685,0.47540426,-0.017996788,-0.00071048737,0.98531336,0.9570826,-1.0091871,-0.013193673,1.0091871,"down","DAB2IP",153090,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0007165 // signal transduction // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // inferred from direct assay /// 0009967 // positive regulation of signal transduction // inferred from direct assay /// 0010633 // negative regulation of epithelial cell migration // traceable author statement /// 0010719 // negative regulation of epithelial to mesenchymal transition // inferred from mutant phenotype /// 0030308 // negative regulation of cell growth // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0032320 // positive regulation of Ras GTPase activity // not recorded /// 0032320 // positive regulation of Ras GTPase activity // inferred from sequence or structural similarity /// 0032320 // positive regulation of Ras GTPase activity // inferred from electronic annotation /// 0034261 // negative regulation of Ras GTPase activity // inferred from mutant phenotype /// 0035414 // negative regulation of catenin import into nucleus // inferred from sequence or structural similarity /// 0035414 // negative regulation of catenin import into nucleus // inferred from electronic annotation /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043124 // negative regulation of I-kappaB kinase/NF-kappaB cascade // inferred from direct assay /// 0043407 // negative regulation of MAP kinase activity // inferred from direct assay /// 0043407 // negative regulation of MAP kinase activity // inferred from mutant phenotype /// 0043507 // positive regulation of JUN kinase activity // inferred from direct assay /// 0043507 // positive regulation of JUN kinase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0046580 // negative regulation of Ras protein signal transduction // not recorded /// 0046580 // negative regulation of Ras protein signal transduction // inferred by curator /// 0046580 // negative regulation of Ras protein signal transduction // inferred from electronic annotation /// 0048147 // negative regulation of fibroblast proliferation // inferred from sequence or structural similarity /// 0048147 // negative regulation of fibroblast proliferation // inferred from electronic annotation /// 0050680 // negative regulation of epithelial cell proliferation // inferred from mutant phenotype /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation /// 0070059 // intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from sequence or structural similarity /// 0070059 // intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from electronic annotation /// 0071356 // cellular response to tumor necrosis factor // inferred from direct assay /// 0071356 // cellular response to tumor necrosis factor // inferred from electronic annotation /// 0071364 // cellular response to epidermal growth factor stimulus // inferred from sequence or structural similarity /// 0071364 // cellular response to epidermal growth factor stimulus // inferred from electronic annotation /// 0071901 // negative regulation of protein serine/threonine kinase activity // inferred from mutant phenotype /// 0071901 // negative regulation of protein serine/threonine kinase activity // inferred from electronic annotation /// 0071902 // positive regulation of protein serine/threonine kinase activity // inferred from mutant phenotype /// 0071902 // positive regulation of protein serine/threonine kinase activity // inferred from electronic annotation /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031235 // intrinsic to internal side of plasma membrane // not recorded","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005099 // Ras GTPase activator activity // not recorded /// 0005099 // Ras GTPase activator activity // inferred from sequence or structural similarity /// 0005099 // Ras GTPase activator activity // inferred from electronic annotation /// 0005123 // death receptor binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0031435 // mitogen-activated protein kinase kinase kinase binding // inferred from physical interaction /// 0035591 // signaling adaptor activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0047485 // protein N-terminus binding // inferred from electronic annotation /// 0051721 // protein phosphatase 2A binding // inferred from direct assay /// 0071889 // 14-3-3 protein binding // inferred from direct assay","chr9:124329398-124547809 (+) // 98.13 // q33.2"]
["11729420_a_at",0.30326033,0.09076691,0.19210958,-0.14080715,-0.31970644,-0.09076691,0.14101255,0.0149791045,1.3005656,0.37913916,1.3005656,"up","TTC26",79989,"","","","chr7:138818489-138874550 (+) // 99.86 // q34"]
["11725004_a_at",-0.12290096,0.011599541,-0.011599541,-0.130476,0.0606122,0.14647245,0.7773227,0.50878876,-1.0471755,-0.06650329,1.0471755,"down","C8orf58",541565,"","","","chr8:22457113-22461655 (+) // 88.07 // p21.3"]
["11738630_a_at",0.032135963,-0.08204603,-0.12669754,-0.032135963,0.07972431,0.08402252,0.4669466,0.16569805,-1.0738106,-0.10273952,1.0738106,"down","RBL1",5933,"0000080 // G1 phase of mitotic cell cycle // traceable author statement /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000278 // mitotic cell cycle // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0043550 // regulation of lipid kinase activity // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction","chr20:35631976-35724410 (-) // 96.2 // q11.23"]
["11756865_a_at",0.18479395,0.08373833,-0.08373785,0.12819815,-0.19006538,-0.33587646,0.6057503,0.28594303,1.1440732,0.19417942,1.1440732,"up","PACRGL",133015,"","","","chr4:20702080-20729119 (+) // 99.19 // p15.31"]
["11755144_a_at",-0.21429181,-0.012171745,0.048410654,-0.18365502,0.100513935,0.012171507,0.9145132,0.77286035,-1.0250502,-0.035694513,1.0250502,"down","LOC100506695 /// PHF21B","100506695 /// 112885","","","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr22:45277044-45404874 (-) // 97.92 // q13.31"]
["11731614_x_at",0.08175564,0.018471718,-0.018471718,0.11733246,-0.021766663,-0.12879753,0.85451424,0.64487755,1.0269238,0.0383291,1.0269238,"up","ETFA",2108,"0006810 // transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from direct assay","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0009055 // electron carrier activity // inferred from direct assay /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0009055 // electron carrier activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from direct assay /// 0050660 // flavin adenine dinucleotide binding // inferred from direct assay /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation","chr15:76508630-76603816 (-) // 94.54 // q24.2"]
["11730303_a_at",0.22870445,-0.15462208,-0.08911991,0.044308662,-0.0037231445,0.0037231445,0.9565706,0.8763599,-1.0138063,-0.019782096,1.0138063,"down","FANCA",2175,"0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006461 // protein complex assembly // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007140 // male meiosis // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0008585 // female gonad development // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0043240 // Fanconi anaemia nuclear complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr16:89803953-89883066 (-) // 99.02 // q24.3"]
["11728815_a_at",0.22398806,-0.058241367,0.002049923,0.3166728,-0.002049923,-0.05106926,0.9405016,0.83511424,-1.0223712,-0.031919062,1.0223712,"down","AARS2",57505,"0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006419 // alanyl-tRNA aminoacylation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0033108 // mitochondrial respiratory chain complex assembly // inferred from mutant phenotype /// 0043039 // tRNA aminoacylation // inferred from electronic annotation /// 0070143 // mitochondrial alanyl-tRNA aminoacylation // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from mutant phenotype /// 0005739 // mitochondrion // inferred from electronic annotation","0000049 // tRNA binding // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004813 // alanine-tRNA ligase activity // inferred from mutant phenotype /// 0004813 // alanine-tRNA ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016876 // ligase activity, forming aminoacyl-tRNA and related compounds // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:44265608-44281063 (-) // 79.85 // p21.1"]
["11738108_at",-0.0021643639,0.039320946,0.09378576,-0.18768072,-0.024889946,0.0021643639,0.45490995,0.15724532,1.0820618,0.11378285,1.0820618,"up","KCNJ9",3765,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005242 // inward rectifier potassium channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015467 // G-protein activated inward rectifier potassium channel activity // inferred from electronic annotation","chr1:160051359-160059212 (+) // 85.46 // q23.2"]
["11731058_a_at",-0.029595852,0.029595852,-0.030462742,-0.09013891,0.09415579,0.116095066,0.7739818,0.50346816,-1.0354024,-0.050191592,1.0354024,"down","RASAL1",8437,"0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0032320 // positive regulation of Ras GTPase activity // not recorded /// 0032320 // positive regulation of Ras GTPase activity // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0046580 // negative regulation of Ras protein signal transduction // not recorded /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded /// 0031235 // intrinsic to internal side of plasma membrane // not recorded","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005099 // Ras GTPase activator activity // not recorded /// 0005099 // Ras GTPase activator activity // traceable author statement /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0005543 // phospholipid binding // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:113536623-113574029 (-) // 88.91 // q24.13"]
["11759746_a_at",0.019057274,0.10600996,0.03909731,-0.08732748,-0.019057274,-0.044574738,0.21007217,0.033378303,1.0755252,0.10504128,1.0755252,"up","RGNEF",64283,"0021955 // central nervous system neuron axonogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0060052 // neurofilament cytoskeleton organization // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:73109342-73237013 (+) // 98.84 // q13.2"]
["11730714_s_at",-0.0016069412,0.0016069412,-0.07770634,0.2202053,0.11152458,-0.0944643,0.65101886,0.33486053,-1.0754874,-0.10499059,1.0754874,"down","XRCC6",2547,"0000723 // telomere maintenance // traceable author statement /// 0006266 // DNA ligation // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006302 // double-strand break repair // traceable author statement /// 0006302 // double-strand break repair // inferred from electronic annotation /// 0006303 // double-strand break repair via nonhomologous end joining // inferred from mutant phenotype /// 0006303 // double-strand break repair via nonhomologous end joining // traceable author statement /// 0006303 // double-strand break repair via nonhomologous end joining // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010212 // response to ionizing radiation // inferred from electronic annotation /// 0016032 // viral reproduction // traceable author statement /// 0019047 // provirus integration // traceable author statement /// 0019059 // initiation of viral infection // traceable author statement /// 0033151 // V(D)J recombination // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0050769 // positive regulation of neurogenesis // inferred from electronic annotation","0000783 // nuclear telomere cap complex // traceable author statement /// 0005624 // membrane fraction // traceable author statement /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005958 // DNA-dependent protein kinase-DNA ligase 4 complex // inferred from electronic annotation /// 0043564 // Ku70:Ku80 complex // inferred from direct assay /// 0070419 // nonhomologous end joining complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // traceable author statement /// 0003691 // double-stranded telomeric DNA binding // inferred from direct assay /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004003 // ATP-dependent DNA helicase activity // inferred from electronic annotation /// 0004003 // ATP-dependent DNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0051575 // 5'-deoxyribose-5-phosphate lyase activity // inferred from mutant phenotype","chr22:42017276-42060047 (+) // 89.98 // q13.2"]
["11757769_s_at",0.13413048,0.005952835,0.025155067,-0.005952835,-0.26641178,-0.26760387,0.30383474,0.0700372,1.176963,0.23506893,1.176963,"up","VCL",7414,"0002009 // morphogenesis of an epithelium // inferred from mutant phenotype /// 0002576 // platelet degranulation // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0006936 // muscle contraction // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007160 // cell-matrix adhesion // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030032 // lamellipodium assembly // inferred from electronic annotation /// 0030032 // lamellipodium assembly // inferred from sequence or structural similarity /// 0030168 // platelet activation // traceable author statement /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // traceable author statement /// 0034333 // adherens junction assembly // inferred from mutant phenotype /// 0034394 // protein localization at cell surface // inferred from mutant phenotype /// 0043297 // apical junction assembly // inferred from mutant phenotype /// 0090136 // epithelial cell-cell adhesion // inferred from mutant phenotype","0001725 // stress fiber // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005884 // actin filament // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from sequence or structural similarity /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005912 // adherens junction // inferred from sequence or structural similarity /// 0005912 // adherens junction // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from direct assay /// 0005916 // fascia adherens // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from sequence or structural similarity /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030055 // cell-substrate junction // non-traceable author statement /// 0043034 // costamere // inferred from direct assay /// 0043034 // costamere // inferred from electronic annotation /// 0043034 // costamere // inferred from sequence or structural similarity /// 0043234 // protein complex // inferred from direct assay","0002162 // dystroglycan binding // inferred from physical interaction /// 0003779 // actin binding // inferred from direct assay /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from sequence or structural similarity /// 0017048 // Rho GTPase binding // inferred from electronic annotation /// 0045294 // alpha-catenin binding // inferred from physical interaction /// 0045296 // cadherin binding // inferred from sequence or structural similarity","chr10:75879304-75879789 (+) // 91.34 // q22.2"]
["11717422_s_at",-0.12046242,-0.10267067,-0.09575844,0.09575844,0.18778801,0.1025095,0.049439743,0.0015303893,-1.1768924,-0.23498242,1.1768924,"down","RBM8A",9939,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from mutant phenotype /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from electronic annotation /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006396 // RNA processing // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation /// 0035145 // exon-exon junction complex // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr1:145507556-145512878 (+) // 83.85 // q21.1"]
["11743355_x_at",0.0076122284,-0.06077099,-0.042305946,0.24271393,0.13767529,-0.0076122284,0.3768932,0.1072026,-1.1142559,-0.1560806,1.1142559,"down","MIR4680 /// PDCD4","100616113 /// 27250","0006915 // apoptotic process // non-traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007569 // cell aging // inferred from direct assay /// 0043508 // negative regulation of JUN kinase activity // inferred from sequence or structural similarity /// 0045786 // negative regulation of cell cycle // non-traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from mutant phenotype /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from mutant phenotype /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr10:112631595-112659764 (+) // 88.72 // q25.2"]
["11747165_a_at",0.016646862,-0.016646862,-0.029345512,0.016860008,-0.0800395,0.049510956,0.9659573,0.90529794,-1.0036287,-0.005225676,1.0036287,"down","C9orf174 /// LOC100499484 /// LOC100499484-C9ORF174","100499483 /// 100499484 /// 57653","","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr9:100000730-100054275 (+) // 81.37 // q22.33"]
["11745197_s_at",-0.25453568,-0.1637268,0.013184547,0.08066082,0.17291069,-0.013184547,0.3387229,0.086698525,-1.1608286,-0.21515496,1.1608286,"down","BOLA2 /// LOC100506060 /// LOC100506830 /// LOC440354 /// LOC595101 /// SMG1","100506060 /// 100506830 /// 23049 /// 440354 /// 552900 /// 595101","0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from direct assay /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // non-traceable author statement /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from electronic annotation /// 0003333 // amino acid transmembrane transport // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0006950 // response to stress // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0015807 // L-amino acid transport // inferred from electronic annotation /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0018105 // peptidyl-serine phosphorylation // traceable author statement /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046854 // phosphatidylinositol phosphorylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // not recorded /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // non-traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0015171 // amino acid transmembrane transporter activity // inferred from electronic annotation /// 0015179 // L-amino acid transmembrane transporter activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:29454574-29465972 (-) // 97.49 // p11.2 /// chr16:29556336-30205314 (-) // 97.41 // p11.2"]
["11717913_at",0.24680614,0.046719074,-0.046719074,0.13127232,-0.08875775,-0.067992926,0.7452139,0.46103787,1.0649321,0.09076146,1.0649321,"up","CDO1",1036,"0000096 // sulfur amino acid metabolic process // traceable author statement /// 0000097 // sulfur amino acid biosynthetic process // traceable author statement /// 0000098 // sulfur amino acid catabolic process // traceable author statement /// 0006534 // cysteine metabolic process // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0007595 // lactation // inferred from electronic annotation /// 0010243 // response to organic nitrogen // inferred from electronic annotation /// 0019448 // L-cysteine catabolic process // inferred from electronic annotation /// 0033762 // response to glucagon stimulus // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042412 // taurine biosynthetic process // inferred from electronic annotation /// 0042412 // taurine biosynthetic process // traceable author statement /// 0043200 // response to amino acid stimulus // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045471 // response to ethanol // inferred from electronic annotation /// 0046439 // L-cysteine metabolic process // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation /// 0055114 // oxidation-reduction process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0005506 // iron ion binding // inferred from electronic annotation /// 0008198 // ferrous iron binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0017172 // cysteine dioxygenase activity // inferred from sequence or structural similarity /// 0017172 // cysteine dioxygenase activity // traceable author statement /// 0017172 // cysteine dioxygenase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:115140429-115152651 (-) // 95.19 // q22.3"]
["11719300_at",-0.13455296,0.07825041,-0.10562229,-0.078250885,0.11780548,0.16150475,0.61039734,0.29031125,-1.0874845,-0.12099481,1.0874845,"down","CTDSP1",58190,"0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006470 // protein dephosphorylation // inferred from direct assay /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0050768 // negative regulation of neurogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008420 // CTD phosphatase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:219264477-219270664 (+) // 90.48 // q35"]
["11729250_at",0.097905636,0.076051,-0.09928775,0.017545462,-0.059809685,-0.017545462,0.79348636,0.53601044,1.0315589,0.044826157,1.0315589,"up","B3GALT2",8707,"0006486 // protein glycosylation // inferred from electronic annotation /// 0006486 // protein glycosylation // traceable author statement /// 0009312 // oligosaccharide biosynthetic process // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008378 // galactosyltransferase activity // inferred from electronic annotation /// 0008499 // UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity // inferred from electronic annotation /// 0008499 // UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr1:193147859-193155780 (-) // 97.72 // q31.2"]
["11742452_s_at",0.118655205,0.21809745,-0.03619075,-0.07474542,0.036190987,-0.17709494,0.44321606,0.14838473,1.1266742,0.17207035,1.1266742,"up","MAGED4 /// MAGED4B /// SNORA11D /// SNORA11E","100124541 /// 100124542 /// 728239 /// 81557","","","","chrX:51928007-51935364 (+) // 99.0 // p11.22 /// chrX:51804922-51812279 (-) // 99.0 // p11.22"]
["11716042_x_at",0.031923294,-0.04911232,0.013864517,0.095438,-0.03596115,-0.013864517,0.9046094,0.7484211,-1.011371,-0.01631234,1.011371,"down","PPP2CB",5516,"0001932 // regulation of protein phosphorylation // inferred from electronic annotation /// 0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0007498 // mesoderm development // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010469 // regulation of receptor activity // inferred from electronic annotation /// 0031952 // regulation of protein autophosphorylation // inferred from electronic annotation /// 0042176 // regulation of protein catabolic process // inferred from electronic annotation /// 0042221 // response to chemical stimulus // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0046580 // negative regulation of Ras protein signal transduction // inferred from electronic annotation /// 0046677 // response to antibiotic // inferred from electronic annotation /// 0070208 // protein heterotrimerization // inferred from electronic annotation","0000159 // protein phosphatase type 2A complex // traceable author statement /// 0000159 // protein phosphatase type 2A complex // inferred from electronic annotation /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000922 // spindle pole // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // traceable author statement /// 0004722 // protein serine/threonine phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from sequence or structural similarity /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr8:30643129-30670352 (-) // 88.51 // p12"]
["11732836_at",-0.27459908,0.0025548935,-0.0025548935,-0.27936268,0.012851238,0.15110874,0.90620965,0.75155133,-1.037467,-0.053065453,1.037467,"down","C4orf6",10141,"0007399 // nervous system development // traceable author statement","","","chr4:5526882-5529525 (+) // 46.17 // p16.2"]
["11715515_a_at",0.001414299,-0.001414299,-0.0821743,0.10568714,-0.0018119812,0.017929077,0.49671644,0.18836106,-1.0482572,-0.067992784,1.0482572,"down","PSMD3",5709,"0000075 // cell cycle checkpoint // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042176 // regulation of protein catabolic process // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement","0000502 // proteasome complex // inferred from electronic annotation /// 0000502 // proteasome complex // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement","0030234 // enzyme regulator activity // inferred from electronic annotation","chr17:38136891-38154207 (+) // 86.51 // q21.1"]
["11739768_a_at",0.04657936,-0.046579838,0.06896353,-0.26129723,-0.10328674,0.049396038,0.57480025,0.25487033,1.0928159,0.12805034,1.0928159,"up","PTPRE",5791,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0007185 // transmembrane receptor protein tyrosine phosphatase signaling pathway // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0033003 // regulation of mast cell activation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from electronic annotation /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005001 // transmembrane receptor protein tyrosine phosphatase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr10:129845812-129884162 (+) // 98.65 // q26.2"]
["11727187_a_at",0.10695362,-0.047031403,-0.07373619,0.09912491,-0.12355709,0.047031403,0.9630288,0.89662343,-1.0084487,-0.012137724,1.0084487,"down","WNT5A",7474,"0000187 // activation of MAPK activity // inferred from direct assay /// 0001667 // ameboidal cell migration // inferred from electronic annotation /// 0001736 // establishment of planar polarity // inferred from electronic annotation /// 0001756 // somitogenesis // not recorded /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001837 // epithelial to mesenchymal transition // inferred from expression pattern /// 0001843 // neural tube closure // not recorded /// 0001843 // neural tube closure // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001947 // heart looping // not recorded /// 0001947 // heart looping // inferred from electronic annotation /// 0002009 // morphogenesis of an epithelium // inferred from electronic annotation /// 0002053 // positive regulation of mesenchymal cell proliferation // not recorded /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0002088 // lens development in camera-type eye // inferred from sequence or structural similarity /// 0002741 // positive regulation of cytokine secretion involved in immune response // inferred from mutant phenotype /// 0003323 // type B pancreatic cell development // not recorded /// 0003323 // type B pancreatic cell development // inferred from electronic annotation /// 0003344 // pericardium morphogenesis // not recorded /// 0003344 // pericardium morphogenesis // inferred from electronic annotation /// 0003401 // axis elongation // inferred from electronic annotation /// 0003408 // optic cup formation involved in camera-type eye development // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // inferred by curator /// 0007223 // Wnt receptor signaling pathway, calcium modulating pathway // inferred from direct assay /// 0007223 // Wnt receptor signaling pathway, calcium modulating pathway // inferred from mutant phenotype /// 0007223 // Wnt receptor signaling pathway, calcium modulating pathway // inferred from electronic annotation /// 0007254 // JNK cascade // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // inferred from direct assay /// 0007257 // activation of JUN kinase activity // inferred from mutant phenotype /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // inferred from sequence or structural similarity /// 0007411 // axon guidance // inferred from electronic annotation /// 0007442 // hindgut morphogenesis // inferred from electronic annotation /// 0007494 // midgut development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008584 // male gonad development // inferred from expression pattern /// 0008584 // male gonad development // inferred from electronic annotation /// 0008595 // anterior/posterior axis specification, embryo // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0009950 // dorsal/ventral axis specification // not recorded /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from expression pattern /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010595 // positive regulation of endothelial cell migration // inferred from mutant phenotype /// 0010820 // positive regulation of T cell chemotaxis // inferred from mutant phenotype /// 0010976 // positive regulation of neuron projection development // inferred from sequence or structural similarity /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from direct assay /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0021891 // olfactory bulb interneuron development // inferred from sequence or structural similarity /// 0021891 // olfactory bulb interneuron development // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0022409 // positive regulation of cell-cell adhesion // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from sequence or structural similarity /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from expression pattern /// 0030324 // lung development // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030514 // negative regulation of BMP signaling pathway // not recorded /// 0030514 // negative regulation of BMP signaling pathway // inferred from electronic annotation /// 0030825 // positive regulation of cGMP metabolic process // inferred from direct assay /// 0030850 // prostate gland development // inferred from electronic annotation /// 0032148 // activation of protein kinase B activity // inferred from direct assay /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0032755 // positive regulation of interleukin-6 production // inferred from mutant phenotype /// 0032755 // positive regulation of interleukin-6 production // inferred from electronic annotation /// 0033574 // response to testosterone stimulus // inferred from electronic annotation /// 0034613 // cellular protein localization // inferred from direct assay /// 0034613 // cellular protein localization // inferred from electronic annotation /// 0035108 // limb morphogenesis // inferred from electronic annotation /// 0035121 // tail morphogenesis // not recorded /// 0035121 // tail morphogenesis // inferred from electronic annotation /// 0040037 // negative regulation of fibroblast growth factor receptor signaling pathway // not recorded /// 0040037 // negative regulation of fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0042060 // wound healing // inferred from direct assay /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0042733 // embryonic digit morphogenesis // not recorded /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0043032 // positive regulation of macrophage activation // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043507 // positive regulation of JUN kinase activity // inferred from electronic annotation /// 0045080 // positive regulation of chemokine biosynthetic process // inferred from mutant phenotype /// 0045599 // negative regulation of fat cell differentiation // inferred from mutant phenotype /// 0045732 // positive regulation of protein catabolic process // inferred from genetic interaction /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype /// 0045778 // positive regulation of ossification // inferred from mutant phenotype /// 0045836 // positive regulation of meiosis // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0046330 // positive regulation of JNK cascade // not recorded /// 0046330 // positive regulation of JNK cascade // inferred from electronic annotation /// 0046546 // development of primary male sexual characteristics // inferred from electronic annotation /// 0048146 // positive regulation of fibroblast proliferation // inferred from direct assay /// 0048286 // lung alveolus development // inferred from electronic annotation /// 0048546 // digestive tract morphogenesis // not recorded /// 0048546 // digestive tract morphogenesis // inferred from electronic annotation /// 0048706 // embryonic skeletal system development // inferred from mutant phenotype /// 0048806 // genitalia development // inferred from mutant phenotype /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0048843 // negative regulation of axon extension involved in axon guidance // inferred from electronic annotation /// 0048850 // hypophysis morphogenesis // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050680 // negative regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050718 // positive regulation of interleukin-1 beta secretion // inferred from mutant phenotype /// 0050718 // positive regulation of interleukin-1 beta secretion // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred from mutant phenotype /// 0050919 // negative chemotaxis // inferred from electronic annotation /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051216 // cartilage development // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051964 // negative regulation of synapse assembly // inferred from electronic annotation /// 0055093 // response to hyperoxia // inferred from electronic annotation /// 0060021 // palate development // inferred from mutant phenotype /// 0060026 // convergent extension // inferred from electronic annotation /// 0060029 // convergent extension involved in organogenesis // not recorded /// 0060029 // convergent extension involved in organogenesis // inferred from electronic annotation /// 0060065 // uterus development // not recorded /// 0060065 // uterus development // inferred from electronic annotation /// 0060067 // cervix development // not recorded /// 0060067 // cervix development // inferred from electronic annotation /// 0060068 // vagina development // not recorded /// 0060068 // vagina development // inferred from electronic annotation /// 0060070 // canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0060071 // Wnt receptor signaling pathway, planar cell polarity pathway // not recorded /// 0060071 // Wnt receptor signaling pathway, planar cell polarity pathway // inferred from electronic annotation /// 0060157 // urinary bladder development // not recorded /// 0060157 // urinary bladder development // inferred from electronic annotation /// 0060210 // metestrus // inferred from electronic annotation /// 0060324 // face development // inferred from mutant phenotype /// 0060340 // positive regulation of type I interferon-mediated signaling pathway // inferred from direct assay /// 0060541 // respiratory system development // not recorded /// 0060599 // lateral sprouting involved in mammary gland duct morphogenesis // not recorded /// 0060599 // lateral sprouting involved in mammary gland duct morphogenesis // inferred from electronic annotation /// 0060606 // tube closure // inferred from electronic annotation /// 0060638 // mesenchymal-epithelial cell signaling // inferred from electronic annotation /// 0060686 // negative regulation of prostatic bud formation // inferred from electronic annotation /// 0060744 // mammary gland branching involved in thelarche // not recorded /// 0060744 // mammary gland branching involved in thelarche // inferred from electronic annotation /// 0060750 // epithelial cell proliferation involved in mammary gland duct elongation // not recorded /// 0060750 // epithelial cell proliferation involved in mammary gland duct elongation // inferred from electronic annotation /// 0060760 // positive regulation of response to cytokine stimulus // inferred from direct assay /// 0060762 // regulation of branching involved in mammary gland duct morphogenesis // not recorded /// 0060762 // regulation of branching involved in mammary gland duct morphogenesis // inferred from electronic annotation /// 0060907 // positive regulation of macrophage cytokine production // inferred from mutant phenotype /// 0061036 // positive regulation of cartilage development // not recorded /// 0061036 // positive regulation of cartilage development // inferred from electronic annotation /// 0061347 // planar cell polarity pathway involved in outflow tract morphogenesis // inferred from electronic annotation /// 0061348 // planar cell polarity pathway involved in ventricular septum morphogenesis // inferred from electronic annotation /// 0061349 // planar cell polarity pathway involved in cardiac right atrium morphogenesis // inferred from electronic annotation /// 0061350 // planar cell polarity pathway involved in cardiac muscle tissue morphogenesis // inferred from electronic annotation /// 0061354 // planar cell polarity pathway involved in pericardium morphogenesis // inferred from electronic annotation /// 0070245 // positive regulation of thymocyte apoptotic process // not recorded /// 0070245 // positive regulation of thymocyte apoptotic process // inferred from electronic annotation /// 0071219 // cellular response to molecule of bacterial origin // inferred from electronic annotation /// 0071222 // cellular response to lipopolysaccharide // inferred from expression pattern /// 0071277 // cellular response to calcium ion // inferred from expression pattern /// 0071300 // cellular response to retinoic acid // inferred from sequence or structural similarity /// 0071346 // cellular response to interferon-gamma // inferred from expression pattern /// 0071425 // hemopoietic stem cell proliferation // inferred from direct assay /// 0071425 // hemopoietic stem cell proliferation // inferred from electronic annotation /// 0071542 // dopaminergic neuron differentiation // not recorded /// 0071542 // dopaminergic neuron differentiation // inferred from electronic annotation /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from expression pattern /// 0072201 // negative regulation of mesenchymal cell proliferation // inferred from direct assay /// 0090009 // primitive streak formation // not recorded /// 0090009 // primitive streak formation // inferred from electronic annotation /// 0090037 // positive regulation of protein kinase C signaling cascade // inferred from mutant phenotype /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from direct assay /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from genetic interaction /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0090103 // cochlea morphogenesis // not recorded /// 0090103 // cochlea morphogenesis // inferred from electronic annotation /// 0090179 // planar cell polarity pathway involved in neural tube closure // inferred from electronic annotation /// 2000049 // positive regulation of cell-cell adhesion mediated by cadherin // inferred from electronic annotation /// 2000484 // positive regulation of interleukin-8 secretion // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // not recorded /// 0009986 // cell surface // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0003700 // sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0005102 // receptor binding // inferred from electronic annotation /// 0005109 // frizzled binding // inferred from physical interaction /// 0005109 // frizzled binding // inferred from electronic annotation /// 0005110 // frizzled-2 binding // not recorded /// 0005110 // frizzled-2 binding // inferred from electronic annotation /// 0005115 // receptor tyrosine kinase-like orphan receptor binding // inferred from physical interaction /// 0005125 // cytokine activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0048018 // receptor agonist activity // inferred by curator","chr3:55499742-55521670 (-) // 96.72 // p14.3"]
["11734458_a_at",0.16420364,0.35752296,0.36079407,-0.16420317,-0.38757038,-0.18097353,0.08471799,0.0051281867,1.4523836,0.5384226,1.4523836,"up","FAM160B1",57700,"","","","chr10:116581502-116659608 (+) // 84.92 // q25.3"]
["11742840_x_at",-0.045543194,-0.22831059,0.14870596,0.15882397,0.045543194,-0.12217331,0.85065883,0.6381964,-1.0490721,-0.069113895,1.0490721,"down","HSD17B1",3292,"0006694 // steroid biosynthetic process // traceable author statement /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006703 // estrogen biosynthetic process // inferred from electronic annotation /// 0006703 // estrogen biosynthetic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008202 // steroid metabolic process // traceable author statement /// 0008210 // estrogen metabolic process // traceable author statement /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // traceable author statement /// 0004303 // estradiol 17-beta-dehydrogenase activity // traceable author statement /// 0004303 // estradiol 17-beta-dehydrogenase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation","chr17:40701499-40707232 (+) // 48.45 // q21.2"]
["11722315_a_at",0.0017580986,-0.033201218,-0.062237263,0.028439045,-0.0017580986,0.2363224,0.5088607,0.1978663,-1.0859025,-0.11889451,1.0859025,"down","PLAC1",10761,"0001890 // placenta development // inferred from expression pattern /// 0001890 // placenta development // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","","chrX:133699872-133792515 (-) // 94.08 // q26.3"]
["11747868_x_at",0.074071884,0.06812954,0.06298733,-0.16466141,-0.06298733,-0.089702606,0.08108692,0.004705358,1.128323,0.17418006,1.128323,"up","SDHA",6389,"0006099 // tricarboxylic acid cycle // inferred from electronic annotation /// 0006099 // tricarboxylic acid cycle // traceable author statement /// 0006105 // succinate metabolic process // inferred from direct assay /// 0006105 // succinate metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007399 // nervous system development // inferred from mutant phenotype /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // inferred from direct assay /// 0022904 // respiratory electron transport chain // traceable author statement /// 0022904 // respiratory electron transport chain // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from sequence or structural similarity /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005749 // mitochondrial respiratory chain complex II // inferred from sequence or structural similarity /// 0005749 // mitochondrial respiratory chain complex II // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0000104 // succinate dehydrogenase activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008177 // succinate dehydrogenase (ubiquinone) activity // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016627 // oxidoreductase activity, acting on the CH-CH group of donors // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation","chr5:218432-256794 (+) // 99.86 // p15.33"]
["11718034_a_at",0.07269025,0.099294186,0.010995865,-0.14539099,-0.010995865,-0.08135557,0.22952327,0.040075086,1.1020892,0.14024095,1.1020892,"up","APOA2",336,"0002526 // acute inflammatory response // inferred from electronic annotation /// 0002740 // negative regulation of cytokine secretion involved in immune response // inferred from direct assay /// 0006457 // protein folding // inferred from direct assay /// 0006629 // lipid metabolic process // traceable author statement /// 0006641 // triglyceride metabolic process // traceable author statement /// 0006656 // phosphatidylcholine biosynthetic process // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0009395 // phospholipid catabolic process // inferred from direct assay /// 0009749 // response to glucose stimulus // inferred from direct assay /// 0010873 // positive regulation of cholesterol esterification // inferred from direct assay /// 0010903 // negative regulation of very-low-density lipoprotein particle remodeling // inferred from direct assay /// 0018158 // protein oxidation // inferred from direct assay /// 0018206 // peptidyl-methionine modification // inferred from direct assay /// 0030300 // regulation of intestinal cholesterol absorption // inferred from electronic annotation /// 0030301 // cholesterol transport // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0031647 // regulation of protein stability // inferred from direct assay /// 0032375 // negative regulation of cholesterol transport // inferred from mutant phenotype /// 0033344 // cholesterol efflux // inferred from direct assay /// 0033700 // phospholipid efflux // inferred from direct assay /// 0034370 // triglyceride-rich lipoprotein particle remodeling // inferred from direct assay /// 0034374 // low-density lipoprotein particle remodeling // inferred from direct assay /// 0034375 // high-density lipoprotein particle remodeling // inferred from direct assay /// 0034380 // high-density lipoprotein particle assembly // inferred from direct assay /// 0034384 // high-density lipoprotein particle clearance // inferred from direct assay /// 0042157 // lipoprotein metabolic process // traceable author statement /// 0042157 // lipoprotein metabolic process // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042632 // cholesterol homeostasis // inferred from direct assay /// 0042632 // cholesterol homeostasis // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0043691 // reverse cholesterol transport // inferred from direct assay /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045416 // positive regulation of interleukin-8 biosynthetic process // inferred from direct assay /// 0046340 // diacylglycerol catabolic process // inferred from direct assay /// 0050995 // negative regulation of lipid catabolic process // inferred from direct assay /// 0050996 // positive regulation of lipid catabolic process // inferred from direct assay /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0060192 // negative regulation of lipase activity // inferred from direct assay /// 0060192 // negative regulation of lipase activity // inferred from electronic annotation /// 0060621 // negative regulation of cholesterol import // inferred from direct assay /// 0060695 // negative regulation of cholesterol transporter activity // inferred from direct assay","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0034361 // very-low-density lipoprotein particle // inferred from direct assay /// 0034364 // high-density lipoprotein particle // inferred from direct assay /// 0034364 // high-density lipoprotein particle // inferred from electronic annotation /// 0034366 // spherical high-density lipoprotein particle // inferred from direct assay /// 0042627 // chylomicron // inferred from direct assay","0005319 // lipid transporter activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from direct assay /// 0008035 // high-density lipoprotein particle binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from direct assay /// 0008289 // lipid binding // inferred from electronic annotation /// 0015485 // cholesterol binding // inferred from direct assay /// 0017127 // cholesterol transporter activity // inferred from direct assay /// 0017127 // cholesterol transporter activity // inferred from electronic annotation /// 0031210 // phosphatidylcholine binding // inferred from direct assay /// 0034190 // apolipoprotein receptor binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0055102 // lipase inhibitor activity // inferred from direct assay /// 0060228 // phosphatidylcholine-sterol O-acyltransferase activator activity // inferred from direct assay /// 0070653 // high-density lipoprotein particle receptor binding // inferred from physical interaction","chr1:161192081-161193418 (-) // 83.45 // q23.3"]
["11755123_x_at",0.028152466,0.008926392,0.0056962967,-0.036790848,-0.0056962967,-0.0476532,0.22041528,0.03700585,1.0311865,0.044305228,1.0311865,"up","LPCAT3",10162,"0006644 // phospholipid metabolic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation /// 0047184 // 1-acylglycerophosphocholine O-acyltransferase activity // inferred from electronic annotation","chr12:7085347-7125781 (-) // 85.87 // p13.31"]
["11763334_at",-0.039197445,-0.14372063,0.1651473,-0.13521957,0.039197445,0.2526765,0.8854419,0.7075146,-1.0411239,-0.058141723,1.0411239,"down","RIN1",9610,"0006897 // endocytosis // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr11:66097712-66103479 (-) // 88.77 // q13.2"]
["11721972_at",0.010910988,0.13893223,0.21231174,-0.16742325,-0.010910988,-0.052654266,0.27704164,0.05820146,1.14688,0.19771448,1.14688,"up","PHF16",9767,"0043966 // histone H3 acetylation // inferred from direct assay /// 0043981 // histone H4-K5 acetylation // inferred from direct assay /// 0043982 // histone H4-K8 acetylation // inferred from direct assay /// 0043983 // histone H4-K12 acetylation // inferred from direct assay /// 0043984 // histone H4-K16 acetylation // inferred from direct assay","0000123 // histone acetyltransferase complex // inferred from direct assay","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:46771867-46920641 (+) // 95.25 // p11.23"]
["11716898_at",0.056601763,-0.19098258,0.025047302,0.077135324,-0.07708502,-0.02504754,0.9136106,0.7704479,-1.0196769,-0.028112119,1.0196769,"down","ARL3",403,"0000910 // cytokinesis // inferred from mutant phenotype /// 0001822 // kidney development // inferred from sequence or structural similarity /// 0001822 // kidney development // inferred from electronic annotation /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from direct assay /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0042461 // photoreceptor cell development // inferred from sequence or structural similarity /// 0042461 // photoreceptor cell development // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0060271 // cilium morphogenesis // inferred from mutant phenotype","0000139 // Golgi membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005876 // spindle microtubule // inferred from direct assay /// 0005881 // cytoplasmic microtubule // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005929 // cilium // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0032391 // photoreceptor connecting cilium // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0072372 // primary cilium // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from electronic annotation /// 0005525 // GTP binding // traceable author statement /// 0008017 // microtubule binding // inferred from direct assay /// 0019003 // GDP binding // inferred from direct assay /// 0019003 // GDP binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:104433483-104474196 (-) // 96.42 // q24.32"]
["11716958_a_at",0.23346615,-0.012512207,-0.12703037,0.19524574,-0.10996437,0.012512207,0.99742335,0.99301296,-1.0008945,-0.001289981,1.0008945,"down","AAAS",8086,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006913 // nucleocytoplasmic transport // inferred from direct assay /// 0007612 // learning // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0009566 // fertilization // inferred from electronic annotation /// 0010827 // regulation of glucose transport // traceable author statement /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046822 // regulation of nucleocytoplasmic transport // non-traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005635 // nuclear envelope // traceable author statement /// 0005643 // nuclear pore // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay","","chr12:53701239-53715415 (-) // 97.87 // q13.13"]
["11731670_a_at",-0.12737131,-0.010002375,0.090055704,-0.0934484,0.010002375,0.07066369,0.9615908,0.8912091,-1.0080113,-0.011511871,1.0080113,"down","PCDHB6",56130,"0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0007416 // synapse assembly // traceable author statement /// 0016339 // calcium-dependent cell-cell adhesion // non-traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr5:140529428-140532868 (+) // 97.86 // q31.3"]
["11758231_x_at",-0.073493004,-0.108145714,-0.17679262,0.073493004,0.1086092,0.14164543,0.06907499,0.003270906,-1.1707175,-0.22739296,1.1707175,"down","HLA-DPA1",3113,"0002504 // antigen processing and presentation of peptide or polysaccharide antigen via MHC class II // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0031295 // T cell costimulation // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0071346 // cellular response to interferon-gamma // inferred from direct assay","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042613 // MHC class II protein complex // inferred from electronic annotation","0032395 // MHC class II receptor activity // non-traceable author statement","chr6:33032792-33036549 (-) // 85.88 // p21.32"]
["11733747_at",0.017317533,0.0071282387,-0.12074232,-0.17088962,-0.0071282387,0.14082599,0.94804,0.85397494,-1.0137497,-0.019701514,1.0137497,"down","MCHR2",84539,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation","chr6:100367785-100442100 (-) // 89.15 // q16.2"]
["11728339_at",0.1870985,0.048019886,0.14326286,-0.048020363,-0.29822922,-0.093140125,0.21558698,0.035385676,1.2079748,0.27259034,1.2079748,"up","CENPBD1",92806,"","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr16:90036198-90039215 (-) // 58.25 // q24.3"]
["11755350_a_at",-0.19719219,0.04273796,-0.026070595,-0.32796335,0.026070118,0.13629389,0.9917374,0.976263,-1.0034544,-0.004975125,1.0034544,"down","XIRP1",165904,"0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0042391 // regulation of membrane potential // inferred from electronic annotation /// 0045214 // sarcomere organization // inferred from electronic annotation /// 0055013 // cardiac muscle cell development // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0005916 // fascia adherens // inferred from electronic annotation /// 0014704 // intercalated disc // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation","chr3:39224705-39234087 (-) // 98.03 // p22.2"]
["11753728_x_at",0.16084194,0.015572548,-0.015127182,0.015127182,-0.024648666,-0.22522354,0.54159814,0.22493736,1.09582,0.13201077,1.09582,"up","MED25",81857,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0035563 // positive regulation of chromatin binding // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048147 // negative regulation of fibroblast proliferation // inferred from mutant phenotype /// 0071158 // positive regulation of cell cycle arrest // inferred from mutant phenotype /// 2001178 // positive regulation of mediator complex assembly // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0042974 // retinoic acid receptor binding // inferred from physical interaction /// 0042974 // retinoic acid receptor binding // inferred from electronic annotation /// 0046965 // retinoid X receptor binding // inferred from physical interaction /// 0046965 // retinoid X receptor binding // inferred from electronic annotation","chr19:50321598-50340219 (+) // 100.0 // q13.33"]
["11729823_s_at",0.12028217,0.011312485,-0.0037631989,0.0037631989,-0.0500288,-0.20961761,0.4638869,0.16353199,1.0927057,0.12790492,1.0927057,"up","WDR85",92715,"0017183 // peptidyl-diphthamide biosynthetic process from peptidyl-histidine // inferred from mutant phenotype","","","chr9:140449360-140473387 (-) // 97.17 // q34.3"]
["11747765_a_at",0.3617344,0.110097885,0.12955189,-0.110097885,-0.5024681,-0.41427517,0.16044563,0.01950229,1.4567384,0.5427418,1.4567384,"up","PPP2R5A",5525,"0007165 // signal transduction // inferred from electronic annotation /// 0035307 // positive regulation of protein dephosphorylation // inferred from mutant phenotype /// 0090005 // negative regulation of establishment of protein localization in plasma membrane // inferred from mutant phenotype /// 0090219 // negative regulation of lipid kinase activity // inferred from mutant phenotype","0000159 // protein phosphatase type 2A complex // inferred from direct assay /// 0000159 // protein phosphatase type 2A complex // inferred from electronic annotation /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0031430 // M band // inferred from sequence or structural similarity","0005515 // protein binding // inferred from physical interaction /// 0008601 // protein phosphatase type 2A regulator activity // inferred from electronic annotation /// 0008601 // protein phosphatase type 2A regulator activity // traceable author statement /// 0019900 // kinase binding // inferred from physical interaction","chr1:212475147-212534482 (+) // 99.73 // q32.3"]
["11716916_a_at",0.014514446,-0.13663769,-0.09855795,-0.014514446,0.053203106,0.2241621,0.41225687,0.12839593,-1.1181992,-0.16117725,1.1181992,"down","PGAP3",93210,"0006505 // GPI anchor metabolic process // inferred from mutant phenotype /// 0006506 // GPI anchor biosynthetic process // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031227 // intrinsic to endoplasmic reticulum membrane // inferred from direct assay","0016788 // hydrolase activity, acting on ester bonds // inferred from mutant phenotype","chr17:37827374-37844310 (-) // 95.9 // q12"]
["11752382_a_at",-0.124821186,0.16589737,0.16072035,-0.32840896,-0.06934452,0.06934452,0.626185,0.30691242,1.130323,0.17673516,1.130323,"up","S1PR1",1901,"0001525 // angiogenesis // inferred from electronic annotation /// 0003376 // sphingosine-1-phosphate signaling pathway // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0019226 // transmission of nerve impulse // inferred from electronic annotation /// 0030155 // regulation of cell adhesion // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0032320 // positive regulation of Ras GTPase activity // inferred from electronic annotation /// 0045446 // endothelial cell differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050927 // positive regulation of positive chemotaxis // inferred from electronic annotation /// 0051482 // elevation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway // inferred from electronic annotation /// 0051497 // negative regulation of stress fiber assembly // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0038036 // sphingosine-1-phosphate receptor activity // inferred from electronic annotation /// 0046625 // sphingolipid binding // inferred from electronic annotation","chr1:101702458-101706505 (+) // 99.86 // p21.2"]
["11740635_a_at",-0.13842058,-0.03331518,0.03331518,0.20596552,-0.033376217,0.19680071,0.43419668,0.14251707,-1.1244895,-0.16927025,1.1244895,"down","C19orf57",79173,"0007275 // multicellular organismal development // non-traceable author statement","","0005515 // protein binding // inferred from physical interaction","chr19:13993165-14016978 (-) // 99.72 // p13.13"]
["11727471_a_at",-0.169559,-0.004513979,0.043354988,0.004513979,-0.05474305,0.045645714,0.8215648,0.5843996,-1.0295721,-0.042044904,1.0295721,"down","CYP2C9",1559,"0006805 // xenobiotic metabolic process // traceable author statement /// 0008202 // steroid metabolic process // inferred from mutant phenotype /// 0016098 // monoterpenoid metabolic process // inferred from direct assay /// 0017144 // drug metabolic process // inferred from direct assay /// 0017144 // drug metabolic process // inferred from mutant phenotype /// 0019627 // urea metabolic process // inferred from direct assay /// 0032787 // monocarboxylic acid metabolic process // inferred from direct assay /// 0042737 // drug catabolic process // inferred from mutant phenotype /// 0042738 // exogenous drug catabolic process // inferred from direct assay /// 0043603 // cellular amide metabolic process // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070989 // oxidative demethylation // inferred from direct assay","0005783 // endoplasmic reticulum // non-traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from direct assay /// 0005792 // microsome // traceable author statement /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004497 // monooxygenase activity // inferred from direct assay /// 0004497 // monooxygenase activity // non-traceable author statement /// 0004497 // monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0008144 // drug binding // inferred from direct assay /// 0008395 // steroid hydroxylase activity // inferred from mutant phenotype /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0018675 // (S)-limonene 6-monooxygenase activity // inferred from electronic annotation /// 0018676 // (S)-limonene 7-monooxygenase activity // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0034875 // caffeine oxidase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0052741 // (R)-limonene 6-monooxygenase activity // inferred from electronic annotation","chr10:96698344-96749662 (+) // 90.41 // q23.33"]
["11736798_a_at",0.049660683,0.320122,-0.005846739,-0.4705944,-0.03953004,0.005846739,0.49548626,0.18734086,1.2221358,0.28940457,1.2221358,"up","RUNX1T1",862,"0006091 // generation of precursor metabolites and energy // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0051101 // regulation of DNA binding // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:92971151-93107731 (-) // 94.86 // q21.3"]
["11740594_s_at",-0.04785204,0.20965862,0.04785204,-0.08907795,-0.1583376,0.074205875,0.5987167,0.2789512,1.092492,0.1276227,1.092492,"up","HIST1H3A /// HIST1H3B /// HIST1H3C /// HIST1H3D /// HIST1H3E /// HIST1H3F /// HIST1H3G /// HIST1H3H /// HIST1H3I /// HIST1H3J","8350 /// 8351 /// 8352 /// 8353 /// 8354 /// 8355 /// 8356 /// 8357 /// 8358 /// 8968","0006334 // nucleosome assembly // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0051320 // S phase // non-traceable author statement /// 0060968 // regulation of gene silencing // inferred from direct assay","0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26225382-26226385 (+) // 98.9 // p22.2"]
["11742499_at",-0.11065292,0.13249207,0.0024914742,-0.31794596,-0.0024914742,0.39919233,0.9784758,0.9379845,-1.0126541,-0.018141417,1.0126541,"down","ARID3C",138715,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation","chr9:34621454-34628011 (-) // 93.95 // p13.3"]
["11735852_s_at",-0.12942219,0.051391125,-0.042838097,-0.040513992,0.040513992,0.26844501,0.6087274,0.28884205,-1.0941203,-0.12977132,1.0941203,"down","OR10H1 /// OR10H5","26539 /// 284433","0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr19:15917812-15918936 (-) // 98.49 // p13.12"]
["11732606_at",0.026529074,-0.0027627945,0.002763033,-0.02720666,-0.05656433,0.20224357,0.8948778,0.72851896,-1.0214707,-0.030647773,1.0214707,"down","CBLN4",140689,"0009306 // protein secretion // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","","chr20:54572259-54580565 (-) // 95.57 // q13.2"]
["11744945_a_at",-0.4831369,-0.18570542,0.0045149326,0.015536547,0.21890354,-0.0045149326,0.42067063,0.13379693,-1.2295105,-0.2980841,1.2295105,"down","NLGN4Y",22829,"0007155 // cell adhesion // inferred from electronic annotation /// 0007416 // synapse assembly // not recorded","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // not recorded /// 0009986 // cell surface // not recorded /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // not recorded /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004091 // carboxylesterase activity // not recorded /// 0004872 // receptor activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0042043 // neurexin family protein binding // not recorded","chrY:16734097-16845419 (+) // 80.05 // q11.221"]
["11758797_s_at",-0.31702423,-0.2472949,-0.17263222,0.17263222,0.22620296,0.1745882,0.034383114,0.0006431825,-1.3535907,-0.4367916,1.3535907,"down","SRSF10",10772,"0000244 // assembly of spliceosomal tri-snRNP // non-traceable author statement /// 0000375 // RNA splicing, via transesterification reactions // inferred from direct assay /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006376 // mRNA splice site selection // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // non-traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0016482 // cytoplasmic transport // inferred from direct assay /// 0048025 // negative regulation of nuclear mRNA splicing, via spliceosome // inferred from direct assay","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0050733 // RS domain binding // non-traceable author statement /// 0051082 // unfolded protein binding // non-traceable author statement","chr1:24290836-24306885 (-) // 85.86 // p36.11 /// chr1_gl000191_random:34172-50213 (-) // 85.84 //"]
["11745321_a_at",-0.17176485,-0.15398765,0.034513712,0.080078125,0.05529499,-0.034513712,0.45171362,0.15471385,-1.0948243,-0.13069938,1.0948243,"down","ZFP28",140612,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:57050321-57064503 (+) // 77.19 // q13.43"]
["11743459_x_at",0.3969431,0.08286381,-0.029328346,0.029328346,-0.3184023,-0.3817072,0.37690148,0.1072299,1.2957194,0.3737533,1.2957194,"up","HDLBP",3069,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0034364 // high-density lipoprotein particle // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0008289 // lipid binding // traceable author statement","chr2:242166701-242255254 (-) // 99.46 // q37.3"]
["11725784_a_at",-0.1794157,0.070160866,0.011634827,-0.03406048,-0.011634827,0.042289734,0.8862794,0.71020776,-1.0220069,-0.031404894,1.0220069,"down","ERI2",112479,"0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:20807661-20817780 (-) // 89.47 // p12.3"]
["11753209_a_at",-0.050774574,0.022485733,0.08172321,-0.022485733,-0.11292267,0.09670448,0.87709075,0.6908013,1.0215167,0.030712763,1.0215167,"up","HYAL1",3373,"0000302 // response to reactive oxygen species // inferred from direct assay /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009615 // response to virus // inferred from direct assay /// 0009615 // response to virus // inferred from electronic annotation /// 0010634 // positive regulation of epithelial cell migration // inferred from direct assay /// 0030212 // hyaluronan metabolic process // inferred from direct assay /// 0030213 // hyaluronan biosynthetic process // inferred from direct assay /// 0030214 // hyaluronan catabolic process // inferred from direct assay /// 0030214 // hyaluronan catabolic process // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from mutant phenotype /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0036120 // cellular response to platelet-derived growth factor stimulus // inferred from direct assay /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from direct assay /// 0045750 // positive regulation of S phase of mitotic cell cycle // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype /// 0045785 // positive regulation of cell adhesion // inferred from mutant phenotype /// 0045927 // positive regulation of growth // inferred from direct assay /// 0046677 // response to antibiotic // inferred from direct assay /// 0050679 // positive regulation of epithelial cell proliferation // inferred from direct assay /// 0051216 // cartilage development // inferred from expression pattern /// 0071347 // cellular response to interleukin-1 // inferred from direct assay /// 0071356 // cellular response to tumor necrosis factor // inferred from expression pattern /// 0071467 // cellular response to pH // inferred from direct assay /// 0071493 // cellular response to UV-B // inferred from direct assay /// 1900106 // positive regulation of hyaluranon cable assembly // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from direct assay /// 0036117 // hyaluranon cable // inferred from direct assay","0001618 // viral receptor activity // inferred from direct assay /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004415 // hyalurononglucosaminidase activity // inferred from direct assay /// 0004415 // hyalurononglucosaminidase activity // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0050501 // hyaluronan synthase activity // inferred from direct assay","chr3:50337912-50341004 (-) // 100.0 // p21.31"]
["11758957_x_at",-0.098561764,0.07217026,0.15887022,-0.075683594,0.0044026375,-0.0044026375,0.72619385,0.43341756,1.0492711,0.06938748,1.0492711,"up","WWP1",11059,"0006464 // cellular protein modification process // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007417 // central nervous system development // non-traceable author statement /// 0016567 // protein ubiquitination // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // not recorded /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0046718 // viral entry into host cell // traceable author statement","0000151 // ubiquitin ligase complex // non-traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // not recorded /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // not recorded /// 0004842 // ubiquitin-protein ligase activity // traceable author statement /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation","chr8:87354966-87480677 (+) // 97.65 // q21.3"]
["11721516_at",0.2951355,-0.030788422,0.0485878,0.030788422,-0.06407261,-0.19753361,0.5122509,0.20050326,1.1338665,0.18125086,1.1338665,"up","SUDS3",64426,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation","0016580 // Sin3 complex // inferred from sequence or structural similarity /// 0016580 // Sin3 complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from sequence or structural similarity /// 0042826 // histone deacetylase binding // inferred from electronic annotation","chr12:118814184-118855840 (+) // 99.96 // q24.23"]
["200000_PM_s_at",0.3225937,-0.07178593,-0.13085747,0.44317245,0.057497025,-0.057497025,0.84726924,0.63148826,-1.0775394,-0.10774068,1.0775394,"down","PRPF8",10594,"0000375 // RNA splicing, via transesterification reactions // traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred from electronic annotation /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005682 // U5 snRNP // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr17:1553923-1588100 (-) // 99.2 // p13.3"]
["11744271_a_at",0.33313227,0.061187744,-0.06118822,0.16424036,-0.10327959,-0.16170931,0.70263237,0.4002078,1.1054447,0.14462681,1.1054447,"up","ULK1",8408,"0000045 // autophagic vacuole assembly // inferred from electronic annotation /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0008104 // protein localization // inferred from mutant phenotype /// 0010506 // regulation of autophagy // inferred from direct assay /// 0010506 // regulation of autophagy // inferred from mutant phenotype /// 0010506 // regulation of autophagy // inferred from electronic annotation /// 0010508 // positive regulation of autophagy // inferred from sequence or structural similarity /// 0010508 // positive regulation of autophagy // inferred from electronic annotation /// 0016239 // positive regulation of macroautophagy // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0021707 // cerebellar granule cell differentiation // inferred from electronic annotation /// 0021933 // radial glia guided migration of cerebellar granule cell // inferred from electronic annotation /// 0031102 // neuron projection regeneration // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from mutant phenotype /// 0031175 // neuron projection development // inferred from electronic annotation /// 0031623 // receptor internalization // inferred from electronic annotation /// 0031669 // cellular response to nutrient levels // inferred from sequence or structural similarity /// 0031669 // cellular response to nutrient levels // inferred from electronic annotation /// 0042594 // response to starvation // inferred from sequence or structural similarity /// 0042594 // response to starvation // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048671 // negative regulation of collateral sprouting // inferred from electronic annotation /// 0048675 // axon extension // inferred from electronic annotation /// 0051386 // regulation of nerve growth factor receptor signaling pathway // inferred from electronic annotation","0000407 // pre-autophagosomal structure // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005776 // autophagic vacuole // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0034045 // pre-autophagosomal structure membrane // inferred from direct assay /// 0034045 // pre-autophagosomal structure membrane // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0070969 // ULK1-ATG13-FIP200 complex // inferred from physical interaction /// 0070969 // ULK1-ATG13-FIP200 complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // non-traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from physical interaction","chr12:132379195-132407695 (+) // 95.0 // q24.33"]
["11742318_at",0.05925131,-0.010904312,-0.06313133,-0.10425329,0.010904312,0.16275978,0.9086492,0.7580079,-1.0196437,-0.02806506,1.0196437,"down","OR6K6",128371,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr1:158724509-158725677 (+) // 99.66 // q23.1"]
["11740622_a_at",-0.02855587,-0.038075447,-0.032896042,0.02855587,0.13040686,0.3107314,0.3312963,0.08306721,-1.1405585,-0.18974042,1.1405585,"down","GPR115",221393,"0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement","chr6:47666280-47689757 (+) // 96.27 // p12.3"]
["11745789_a_at",0.17855358,0.104727745,0.15494156,-0.104727745,-0.1421709,-0.2733717,0.07950035,0.004537129,1.2478961,0.3194978,1.2478961,"up","TMEM135",65084,"0007031 // peroxisome organization // inferred from sequence or structural similarity","0005777 // peroxisome // inferred from sequence or structural similarity /// 0005777 // peroxisome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:86748883-87034802 (+) // 99.04 // q14.2"]
["11743633_a_at",-0.229455,-0.038544655,-0.027136803,0.027136803,0.11577511,0.112356186,0.2885041,0.06281148,-1.1356106,-0.1834682,1.1356106,"down","STX2",2054,"0000910 // cytokinesis // inferred from electronic annotation /// 0000920 // cytokinetic cell separation // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007340 // acrosome reaction // inferred from sequence or structural similarity /// 0007398 // ectoderm development // traceable author statement /// 0009887 // organ morphogenesis // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0030033 // microvillus assembly // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030855 // epithelial cell differentiation // inferred from electronic annotation /// 0045026 // plasma membrane fusion // inferred from electronic annotation /// 0048546 // digestive tract morphogenesis // inferred from electronic annotation","0005625 // soluble fraction // traceable author statement /// 0005792 // microsome // traceable author statement /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0030133 // transport vesicle // inferred from electronic annotation /// 0030496 // midbody // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation","0000149 // SNARE binding // inferred from electronic annotation /// 0005484 // SNAP receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0048306 // calcium-dependent protein binding // inferred from sequence or structural similarity","chr12:131274144-131323811 (-) // 87.36 // q24.33"]
["11716736_at",0.033971786,-0.02598095,-0.0775156,0.09790897,0.02598095,-0.040299416,0.68375665,0.3759935,-1.0360104,-0.051038463,1.0360104,"down","PRPF19",27339,"0000209 // protein polyubiquitination // inferred from direct assay /// 0000245 // spliceosomal complex assembly // inferred from mutant phenotype /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0001833 // inner cell mass cell proliferation // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0048711 // positive regulation of astrocyte differentiation // inferred from electronic annotation","0000151 // ubiquitin ligase complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005811 // lipid particle // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0034450 // ubiquitin-ubiquitin ligase activity // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction","chr11:60658021-60674056 (-) // 97.13 // q12.2"]
["11720717_a_at",0.014736176,-0.17124248,0.10957956,-0.014736176,0.07595587,-0.03476739,0.924228,0.7975764,-1.0170987,-0.024459636,1.0170987,"down","FGF13",2258,"0000165 // MAPK cascade // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0045860 // positive regulation of protein kinase activity // inferred from genetic interaction /// 2001257 // regulation of cation channel activity // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from physical interaction","0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation /// 0008083 // growth factor activity // traceable author statement /// 0030295 // protein kinase activator activity // inferred from genetic interaction","chrX:137713733-137793959 (-) // 91.8 // q26.3"]
["11761879_at",0.1274674,-0.03672552,0.03672552,-0.17557597,0.047951937,-0.1662252,0.48854962,0.18211794,1.1022403,0.14043881,1.1022403,"up","EXOSC3",51010,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0006364 // rRNA processing // inferred from direct assay /// 0006364 // rRNA processing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // inferred from mutant phenotype /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement /// 0045006 // DNA deamination // inferred from direct assay /// 0045190 // isotype switching // inferred from sequence or structural similarity /// 0045190 // isotype switching // inferred from electronic annotation /// 0071034 // CUT catabolic process // inferred from mutant phenotype","0000176 // nuclear exosome (RNase complex) // inferred from direct assay /// 0000177 // cytoplasmic exosome (RNase complex) // inferred from direct assay /// 0000178 // exosome (RNase complex) // inferred from direct assay /// 0000178 // exosome (RNase complex) // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0035327 // transcriptionally active chromatin // inferred from mutant phenotype","0000175 // 3'-5'-exoribonuclease activity // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0004532 // exoribonuclease activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr9:37766974-37785058 (-) // 71.32 // p13.2"]
["11739918_a_at",0.22146273,0.23223066,0.27600527,-0.40772915,-0.314878,-0.22146273,0.033232883,0.00058197073,1.4721482,0.5579229,1.4721482,"up","RASGRP3",25780,"0000165 // MAPK cascade // non-traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // inferred from electronic annotation /// 0032854 // positive regulation of Rap GTPase activity // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043087 // regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0032045 // guanyl-nucleotide exchange factor complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0004871 // signal transducer activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005088 // Ras guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0017016 // Ras GTPase binding // inferred from electronic annotation /// 0019900 // kinase binding // inferred from electronic annotation /// 0019992 // diacylglycerol binding // non-traceable author statement /// 0046582 // Rap GTPase activator activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:33661390-33789797 (+) // 96.71 // p22.3"]
["11751589_a_at",0.3531189,0.15546417,0.15557575,-0.15546417,-0.3115549,-0.2589531,0.07886694,0.004467457,1.3787653,0.46337694,1.3787653,"up","NMT1",4836,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0006498 // N-terminal protein lipidation // non-traceable author statement /// 0006499 // N-terminal protein myristoylation // non-traceable author statement /// 0006499 // N-terminal protein myristoylation // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0009249 // protein lipoylation // traceable author statement /// 0016032 // viral reproduction // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0030054 // cell junction // inferred from direct assay","0003824 // catalytic activity // traceable author statement /// 0004379 // glycylpeptide N-tetradecanoyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0019107 // myristoyltransferase activity // inferred from electronic annotation","chr17:43138687-43176211 (+) // 81.33 // q21.31"]
["11739535_s_at",-0.2501006,0.0056066513,0.04639387,-0.2338705,-0.0056066513,0.08488369,0.971152,0.91822475,-1.0101029,-0.014502224,1.0101029,"down","FN1",2335,"0001525 // angiogenesis // inferred from electronic annotation /// 0002576 // platelet degranulation // traceable author statement /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006953 // acute-phase response // inferred from electronic annotation /// 0007044 // cell-substrate junction assembly // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0009611 // response to wounding // non-traceable author statement /// 0010952 // positive regulation of peptidase activity // inferred from electronic annotation /// 0016477 // cell migration // non-traceable author statement /// 0018149 // peptide cross-linking // inferred from direct assay /// 0030168 // platelet activation // traceable author statement /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0034446 // substrate adhesion-dependent cell spreading // inferred from direct assay /// 0042060 // wound healing // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005577 // fibrinogen complex // inferred from direct assay /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0031093 // platelet alpha granule lumen // traceable author statement","0002020 // protease binding // inferred from electronic annotation /// 0005201 // extracellular matrix structural constituent // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // non-traceable author statement /// 0008201 // heparin binding // non-traceable author statement /// 0008201 // heparin binding // inferred from electronic annotation /// 0016504 // peptidase activator activity // inferred from electronic annotation /// 0045340 // mercury ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:216225180-216300791 (-) // 99.76 // q35"]
["11716181_x_at",0.56271553,0.07483196,-0.07483196,0.17710495,-0.20244932,-0.08095026,0.6820295,0.37321958,1.1671609,0.22300342,1.1671609,"up","MED15",51586,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016592 // mediator complex // inferred from electronic annotation","0001104 // RNA polymerase II transcription cofactor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr22:20861828-20941904 (+) // 88.62 // q11.21"]
["11715421_a_at",0.084311485,0.09831715,0.06401825,-0.17707443,-0.077913284,-0.064017296,0.09775161,0.0069772247,1.1396183,0.18855067,1.1396183,"up","CCT2",10576,"0006457 // protein folding // non-traceable author statement /// 0006457 // protein folding // traceable author statement /// 0006457 // protein folding // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044267 // cellular protein metabolic process // inferred from electronic annotation /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0051131 // chaperone-mediated protein complex assembly // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005832 // chaperonin-containing T-complex // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // non-traceable author statement /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr12:69979238-69995349 (+) // 92.1 // q15"]
["11763140_at",0.0041503906,-0.0041503906,-0.14448261,0.10417652,-0.03305626,0.5278778,0.5485289,0.2309274,-1.1874171,-0.24782684,1.1874171,"down",0.10417652,-0.03305626,0.5278778,0.0041503906,-0.0041503906,-0.14448261]
["11744977_at",-0.012124538,-0.13107824,-0.01158905,0.01158905,0.12891436,0.24329853,0.32972693,0.08226334,-1.1325159,-0.1795313,1.1325159,"down","MGC45922",284365,"","","","chr19:51320936-51322133 (+) // 92.47 // q13.33"]
["11717213_a_at",-1.0524626,-0.7798071,-0.92366695,0.8065376,0.93341637,0.7798071,0.014768948,4.3952532e-5,-3.3836162,-1.7585659,3.3836162,"down","NSMAF",8439,"0006672 // ceramide metabolic process // traceable author statement /// 0007165 // signal transduction // traceable author statement","0005625 // soluble fraction // traceable author statement /// 0005737 // cytoplasm // traceable author statement","0005057 // receptor signaling protein activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr8:59496066-59572404 (-) // 96.84 // q12.1"]
["11754888_a_at",0.15931416,0.09425259,0.07742977,-0.07742977,-0.13733959,-0.3116932,0.15618746,0.018570798,1.2191027,0.2858197,1.2191027,"up","ADSSL1",122622,"0002376 // immune system process // non-traceable author statement /// 0006144 // purine base metabolic process // traceable author statement /// 0006163 // purine nucleotide metabolic process // inferred from electronic annotation /// 0006164 // purine nucleotide biosynthetic process // inferred from electronic annotation /// 0006167 // AMP biosynthetic process // inferred from direct assay /// 0009168 // purine ribonucleoside monophosphate biosynthetic process // traceable author statement /// 0044208 // 'de novo' AMP biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004019 // adenylosuccinate synthase activity // inferred from direct assay /// 0004019 // adenylosuccinate synthase activity // inferred from electronic annotation /// 0005525 // GTP binding // non-traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0042301 // phosphate ion binding // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:105210817-105213645 (+) // 84.06 // q32.33"]
["11743791_s_at",0.120762825,-0.025032043,0.025032043,0.21795225,-0.13277435,-0.09619331,0.89586234,0.7312721,1.0309155,0.043926083,1.0309155,"up","FRS2",10818,"0000186 // activation of MAPKK activity // traceable author statement /// 0000187 // activation of MAPK activity // inferred from electronic annotation /// 0001702 // gastrulation with mouth forming second // inferred from electronic annotation /// 0001759 // organ induction // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007185 // transmembrane receptor protein tyrosine phosphatase signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007405 // neuroblast proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from genetic interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0008595 // anterior/posterior axis specification, embryo // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0046619 // optic placode formation involved in camera-type eye formation // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050678 // regulation of epithelial cell proliferation // inferred from electronic annotation /// 0060527 // prostate epithelial cord arborization involved in prostate glandular acinus morphogenesis // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005068 // transmembrane receptor protein tyrosine kinase adaptor activity // traceable author statement /// 0005068 // transmembrane receptor protein tyrosine kinase adaptor activity // inferred from electronic annotation /// 0005104 // fibroblast growth factor receptor binding // inferred from physical interaction /// 0005158 // insulin receptor binding // inferred from electronic annotation /// 0005168 // neurotrophin TRKA receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0019211 // phosphatase activator activity // traceable author statement","chr12:69864128-69973573 (+) // 98.22 // q15"]
["11736531_a_at",-0.2713666,0.05339527,-0.05339527,0.113723755,-0.1750946,0.059973717,0.7888244,0.52799934,-1.0643626,-0.08998978,1.0643626,"down","LRRFIP1",9208,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // non-traceable author statement","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005856 // cytoskeleton // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr2:238536223-238690286 (+) // 94.48 // q37.3"]
["11715737_at",0.08405399,-0.019951344,-0.14226437,0.019951344,-0.13306665,0.08952284,0.94806445,0.8540577,-1.012688,-0.01818982,1.012688,"down","CASC3",22794,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0008298 // intracellular mRNA localization // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0035145 // exon-exon junction complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from direct assay","chr17:38296506-38328424 (+) // 93.04 // q21.1"]
["11757973_x_at",0.16400671,0.23001766,-0.021199226,0.021199226,-0.029912472,-0.050203323,0.4293913,0.13929681,1.1048986,0.14391394,1.1048986,"up","NMT2",9397,"0006499 // N-terminal protein myristoylation // inferred from electronic annotation /// 0009249 // protein lipoylation // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0046788 // egress of virus within host cell // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay","0003824 // catalytic activity // traceable author statement /// 0004379 // glycylpeptide N-tetradecanoyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation","chr10:15149864-15151212 (-) // 77.05 // p13"]
["11758894_at",0.0039486885,0.008160114,-0.084308624,0.04812765,-0.16588831,-0.0039486885,0.93770176,0.8279378,1.0115048,0.016503122,1.0115048,"up","PARD3",56288,"0006461 // protein complex assembly // traceable author statement /// 0006612 // protein targeting to membrane // inferred from sequence or structural similarity /// 0007049 // cell cycle // inferred from electronic annotation /// 0007163 // establishment or maintenance of cell polarity // traceable author statement /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // traceable author statement /// 0007409 // axonogenesis // traceable author statement /// 0008356 // asymmetric cell division // traceable author statement /// 0034329 // cell junction assembly // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0070830 // tight junction assembly // inferred from sequence or structural similarity /// 0070830 // tight junction assembly // traceable author statement /// 0090162 // establishment of epithelial cell polarity // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0005911 // cell-cell junction // inferred from sequence or structural similarity /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0005923 // tight junction // inferred from direct assay /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0005923 // tight junction // inferred from electronic annotation /// 0005923 // tight junction // traceable author statement /// 0005938 // cell cortex // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation","0005080 // protein kinase C binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from sequence or structural similarity /// 0005547 // phosphatidylinositol-3,4,5-trisphosphate binding // inferred from sequence or structural similarity /// 0008289 // lipid binding // inferred from electronic annotation /// 0032266 // phosphatidylinositol-3-phosphate binding // inferred from sequence or structural similarity","chr10:34398488-35104211 (-) // 95.5 // p11.22"]
["11762379_at",-0.27538133,0.043427944,0.13170862,-0.31376338,-0.043427944,0.30587244,0.9805126,0.9439172,-1.0113684,-0.016308598,1.0113684,"down","NOS1",4842,"0001666 // response to hypoxia // inferred from expression pattern /// 0002028 // regulation of sodium ion transport // inferred from electronic annotation /// 0006527 // arginine catabolic process // inferred by curator /// 0006809 // nitric oxide biosynthetic process // inferred from electronic annotation /// 0006809 // nitric oxide biosynthetic process // inferred from sequence or structural similarity /// 0006941 // striated muscle contraction // inferred from electronic annotation /// 0007520 // myoblast fusion // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0009408 // response to heat // inferred from direct assay /// 0010523 // negative regulation of calcium ion transport into cytosol // traceable author statement /// 0018119 // peptidyl-cysteine S-nitrosylation // inferred from electronic annotation /// 0033555 // multicellular organismal response to stress // inferred from mutant phenotype /// 0035066 // positive regulation of histone acetylation // inferred from electronic annotation /// 0042136 // neurotransmitter biosynthetic process // traceable author statement /// 0042738 // exogenous drug catabolic process // inferred from electronic annotation /// 0043267 // negative regulation of potassium ion transport // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045909 // positive regulation of vasodilation // inferred from direct assay /// 0045909 // positive regulation of vasodilation // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051346 // negative regulation of hydrolase activity // inferred from electronic annotation /// 0051612 // negative regulation of serotonin uptake // inferred from electronic annotation /// 0051926 // negative regulation of calcium ion transport // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0055117 // regulation of cardiac muscle contraction // traceable author statement /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation","0001917 // photoreceptor inner segment // inferred from sequence or structural similarity /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016529 // sarcoplasmic reticulum // inferred from direct assay /// 0042383 // sarcolemma // inferred from direct assay /// 0042383 // sarcolemma // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity","0004517 // nitric-oxide synthase activity // inferred from electronic annotation /// 0004517 // nitric-oxide synthase activity // inferred from sequence or structural similarity /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0010181 // FMN binding // inferred from sequence or structural similarity /// 0010181 // FMN binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0020037 // heme binding // inferred from sequence or structural similarity /// 0020037 // heme binding // inferred from electronic annotation /// 0034617 // tetrahydrobiopterin binding // non-traceable author statement /// 0034618 // arginine binding // traceable author statement /// 0046870 // cadmium ion binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from sequence or structural similarity /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation /// 0050661 // NADP binding // inferred from sequence or structural similarity /// 0050661 // NADP binding // inferred from electronic annotation","chr12:117645952-117799411 (-) // 99.68 // q24.22"]
["11726766_x_at",-0.14491272,-0.20232296,-0.13591194,0.23543453,0.32137966,0.13591194,0.06048134,0.002418274,-1.312173,-0.39195794,1.312173,"down","TIPRL",261726,"0000077 // DNA damage checkpoint // inferred from mutant phenotype /// 0034048 // negative regulation of protein phosphatase type 2A activity // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:168148082-168171349 (+) // 96.75 // q24.2"]
["11739827_a_at",-0.0914464,-0.10194111,0.101772785,-0.08969021,0.25294495,0.08969021,0.69437516,0.38935333,-1.0828649,-0.11485323,1.0828649,"down","HTR3A",3359,"0006810 // transport // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0007210 // serotonin receptor signaling pathway // inferred from direct assay /// 0007210 // serotonin receptor signaling pathway // non-traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007586 // digestion // traceable author statement /// 0034220 // ion transmembrane transport // traceable author statement /// 0042220 // response to cocaine // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0030054 // cell junction // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0004993 // serotonin receptor activity // inferred from direct assay /// 0004993 // serotonin receptor activity // non-traceable author statement /// 0004993 // serotonin receptor activity // traceable author statement /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // non-traceable author statement /// 0005232 // serotonin-activated cation-selective channel activity // traceable author statement /// 0005232 // serotonin-activated cation-selective channel activity // inferred from electronic annotation /// 0005249 // voltage-gated potassium channel activity // inferred from electronic annotation /// 0051378 // serotonin binding // inferred from direct assay","chr11:113845602-113861032 (+) // 98.94 // q23.2"]
["11739816_a_at",-0.19900966,0.07306218,0.24981904,-0.373353,-0.009288549,0.009288788,0.7097249,0.41029802,1.1217424,0.16574137,1.1217424,"up","DLG4",1742,"0001973 // adenosine receptor signaling pathway // inferred from sequence or structural similarity /// 0006461 // protein complex assembly // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007612 // learning // traceable author statement /// 0016188 // synaptic vesicle maturation // inferred from electronic annotation /// 0035176 // social behavior // inferred from electronic annotation /// 0035418 // protein localization to synapse // inferred from direct assay /// 0035641 // locomotory exploration behavior // inferred from electronic annotation /// 0045184 // establishment of protein localization // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0050806 // positive regulation of synaptic transmission // inferred from sequence or structural similarity /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation /// 0060997 // dendritic spine morphogenesis // inferred from sequence or structural similarity /// 0060997 // dendritic spine morphogenesis // inferred from electronic annotation /// 0071625 // vocalization behavior // inferred from electronic annotation /// 0097113 // alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate receptor clustering // inferred from sequence or structural similarity /// 0097113 // alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate receptor clustering // traceable author statement /// 0097120 // receptor localization to synapse // inferred from sequence or structural similarity /// 2000310 // regulation of N-methyl-D-aspartate selective glutamate receptor activity // inferred from sequence or structural similarity /// 2000463 // positive regulation of excitatory postsynaptic membrane potential // inferred from sequence or structural similarity /// 2000821 // regulation of grooming behavior // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008328 // ionotropic glutamate receptor complex // inferred from sequence or structural similarity /// 0014069 // postsynaptic density // inferred from sequence or structural similarity /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from sequence or structural similarity /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0030863 // cortical cytoskeleton // inferred from direct assay /// 0031234 // extrinsic to internal side of plasma membrane // inferred from electronic annotation /// 0032281 // alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex // inferred from electronic annotation /// 0032839 // dendrite cytoplasm // inferred from sequence or structural similarity /// 0044224 // juxtaparanode region of axon // inferred from electronic annotation /// 0044306 // neuron projection terminus // inferred from electronic annotation /// 0044309 // neuron spine // inferred from sequence or structural similarity /// 0044309 // neuron spine // inferred from electronic annotation /// 0045202 // synapse // inferred from direct assay /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from direct assay /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0060076 // excitatory synapse // inferred from sequence or structural similarity /// 0060076 // excitatory synapse // inferred from electronic annotation","0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from electronic annotation /// 0031812 // P2Y1 nucleotide receptor binding // inferred from sequence or structural similarity /// 0035255 // ionotropic glutamate receptor binding // inferred from sequence or structural similarity /// 0035255 // ionotropic glutamate receptor binding // inferred from electronic annotation /// 0045031 // ATP-activated nucleotide receptor activity // inferred from sequence or structural similarity /// 0045032 // ADP-activated nucleotide receptor activity // inferred from sequence or structural similarity /// 0097110 // scaffold protein binding // inferred from sequence or structural similarity /// 0097110 // scaffold protein binding // inferred from electronic annotation","chr17:7093208-7123369 (-) // 98.87 // p13.1"]
["11764248_s_at",0.11799717,-0.068118095,0.043395996,0.010710716,-0.010710716,-0.21706581,0.6347731,0.31697834,1.0743372,0.10344694,1.0743372,"up","LDLRAD3",143458,"","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr11:36253241-36253685 (+) // 92.34 // p13"]
["11756264_s_at",-0.0744977,-0.20425606,0.028412342,-0.028412342,0.06460333,0.22693634,0.46412304,0.16373739,-1.1259605,-0.17115617,1.1259605,"down","IPW /// LOC100506948 /// SNORD107 /// SNORD115-13 /// SNORD115-26 /// SNORD115-7 /// SNORD116-28","100033444 /// 100033450 /// 100033802 /// 100033820 /// 100506948 /// 3653 /// 91380","","","","chr15:25365494-25367626 (+) // 64.45 // q11.2"]
["11735386_a_at",-0.09730673,0.0030817986,-0.0030817986,-0.35310936,0.033210278,0.18736982,0.98147404,0.9463639,1.0081713,0.011740819,1.0081713,"up","DACT1",51339,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from genetic interaction /// 0045732 // positive regulation of protein catabolic process // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr14:59104756-59115036 (+) // 98.19 // q23.1"]
["11760301_x_at",0.1463213,-0.06144333,-0.073419094,0.22694778,0.040766716,-0.040767193,0.79412395,0.5373886,-1.0510486,-0.07182943,1.0510486,"down","HEXA",3073,"0001501 // skeletal system development // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006687 // glycosphingolipid metabolic process // traceable author statement /// 0006689 // ganglioside catabolic process // inferred from electronic annotation /// 0007040 // lysosome organization // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0007628 // adult walking behavior // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0019915 // lipid storage // inferred from electronic annotation /// 0019953 // sexual reproduction // inferred from electronic annotation /// 0030203 // glycosaminoglycan metabolic process // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0048667 // cell morphogenesis involved in neuron differentiation // inferred from electronic annotation /// 0050884 // neuromuscular process controlling posture // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0043202 // lysosomal lumen // traceable author statement","0004563 // beta-N-acetylhexosaminidase activity // inferred from electronic annotation /// 0043169 // cation binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from direct assay","chr15:72636197-72668355 (-) // 94.82 // q23"]
["11764156_s_at",-0.03369522,-0.026540756,0.037638664,-0.010311127,0.010311127,0.07135105,0.70346344,0.40151322,-1.0219439,-0.03131604,1.0219439,"down","TMEM41B",440026,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:9302551-9303064 (-) // 89.76 // p15.4"]
["11731980_at",-0.07285738,-0.279644,0.07285738,-0.21094322,0.21842003,0.103030205,0.7529584,0.47232345,-1.0943319,-0.1300503,1.0943319,"down","FNDC7",163479,"","0005576 // extracellular region // inferred from electronic annotation","","chr1:109255555-109285365 (+) // 99.45 // p13.3"]
["11728493_a_at",0.084033966,-0.13807201,-0.2381773,0.16893244,0.09881067,-0.084033966,0.58136594,0.2615316,-1.1162355,-0.15864143,1.1162355,"down","ZNF197",10168,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:44666510-44689960 (+) // 39.6 // p21.31"]
["11762342_at",-0.702651,-0.015454769,0.015454769,-0.08214617,0.027506828,0.49985313,0.5836895,0.26389757,-1.3037088,-0.38262165,1.3037088,"down","","","","","","chr6:144165697-144178582 (-) // 62.55 // q24.2"]
["11759134_a_at",-0.36375785,-0.03098774,-0.028318167,0.40512657,0.028318405,0.20880032,0.33516425,0.084722355,-1.2790769,-0.35510305,1.2790769,"down","CHRNA3",1136,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // non-traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006937 // regulation of muscle contraction // inferred from electronic annotation /// 0006940 // regulation of smooth muscle contraction // inferred from sequence or structural similarity /// 0006940 // regulation of smooth muscle contraction // inferred from electronic annotation /// 0007165 // signal transduction // inferred from direct assay /// 0007171 // activation of transmembrane receptor protein tyrosine kinase activity // inferred from sequence or structural similarity /// 0007171 // activation of transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007271 // synaptic transmission, cholinergic // inferred from sequence or structural similarity /// 0007271 // synaptic transmission, cholinergic // inferred from electronic annotation /// 0007399 // nervous system development // inferred from mutant phenotype /// 0007507 // heart development // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from sequence or structural similarity /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0010035 // response to inorganic substance // inferred from electronic annotation /// 0014056 // regulation of acetylcholine secretion // inferred from sequence or structural similarity /// 0014056 // regulation of acetylcholine secretion // inferred from electronic annotation /// 0035094 // response to nicotine // inferred from electronic annotation /// 0035095 // behavioral response to nicotine // inferred from mutant phenotype /// 0035095 // behavioral response to nicotine // inferred from electronic annotation /// 0042391 // regulation of membrane potential // inferred from sequence or structural similarity /// 0042391 // regulation of membrane potential // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0048814 // regulation of dendrite morphogenesis // inferred from sequence or structural similarity /// 0048814 // regulation of dendrite morphogenesis // inferred from electronic annotation /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from sequence or structural similarity /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from electronic annotation /// 0060084 // synaptic transmission involved in micturition // inferred from mutant phenotype /// 0060084 // synaptic transmission involved in micturition // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005892 // acetylcholine-gated channel complex // inferred from direct assay /// 0005892 // acetylcholine-gated channel complex // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from sequence or structural similarity /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from sequence or structural similarity /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004889 // acetylcholine-activated cation-selective channel activity // inferred from direct assay /// 0004889 // acetylcholine-activated cation-selective channel activity // traceable author statement /// 0004889 // acetylcholine-activated cation-selective channel activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0015276 // ligand-gated ion channel activity // traceable author statement /// 0015464 // acetylcholine receptor activity // inferred from direct assay /// 0015464 // acetylcholine receptor activity // inferred from electronic annotation /// 0042166 // acetylcholine binding // inferred by curator /// 0042166 // acetylcholine binding // inferred from electronic annotation","chr15:78887651-78913322 (-) // 78.8 // q25.1"]
["11723200_s_at",-0.40340996,-0.23749447,-0.20772743,0.37519264,0.3876257,0.20772743,0.054932237,0.001960259,-1.5224476,-0.60639256,1.5224476,"down","HNRNPA3",220988,"0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0030529 // ribonucleoprotein complex // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement","chr2:178077022-178088686 (+) // 93.56 // q31.2"]
["11718259_at",-0.11383295,-0.24585056,-0.17099285,0.11383295,0.1346674,0.1859889,0.05342409,0.0018334879,-1.2498213,-0.32172182,1.2498213,"down","NOTCH1",4851,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001708 // cell fate specification // inferred from electronic annotation /// 0001837 // epithelial to mesenchymal transition // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0002040 // sprouting angiogenesis // inferred from electronic annotation /// 0002052 // positive regulation of neuroblast proliferation // inferred from electronic annotation /// 0002437 // inflammatory response to antigenic stimulus // inferred from electronic annotation /// 0003180 // aortic valve morphogenesis // inferred from mutant phenotype /// 0003219 // cardiac right ventricle formation // inferred from electronic annotation /// 0003264 // regulation of cardioblast proliferation // inferred from electronic annotation /// 0003270 // Notch signaling pathway involved in regulation of secondary heart field cardioblast proliferation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006955 // immune response // non-traceable author statement /// 0006959 // humoral immune response // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from mutant phenotype /// 0007219 // Notch signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007220 // Notch receptor processing // traceable author statement /// 0007221 // positive regulation of transcription of Notch receptor target // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0007386 // compartment pattern specification // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007440 // foregut morphogenesis // inferred from electronic annotation /// 0007492 // endoderm development // inferred from electronic annotation /// 0007507 // heart development // inferred from mutant phenotype /// 0007507 // heart development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0009912 // auditory receptor cell fate commitment // inferred from electronic annotation /// 0010001 // glial cell differentiation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from mutant phenotype /// 0010812 // negative regulation of cell-substrate adhesion // inferred from direct assay /// 0010832 // negative regulation of myotube differentiation // inferred from sequence or structural similarity /// 0014807 // regulation of somitogenesis // inferred from electronic annotation /// 0021515 // cell differentiation in spinal cord // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030513 // positive regulation of BMP signaling pathway // inferred from sequence or structural similarity /// 0030514 // negative regulation of BMP signaling pathway // inferred from sequence or structural similarity /// 0030900 // forebrain development // inferred from electronic annotation /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0031960 // response to corticosteroid stimulus // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042246 // tissue regeneration // inferred from electronic annotation /// 0042640 // anagen // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from sequence or structural similarity /// 0045165 // cell fate commitment // inferred from electronic annotation /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045603 // positive regulation of endothelial cell differentiation // inferred from electronic annotation /// 0045618 // positive regulation of keratinocyte differentiation // inferred from electronic annotation /// 0045662 // negative regulation of myoblast differentiation // inferred from mutant phenotype /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045668 // negative regulation of osteoblast differentiation // inferred from sequence or structural similarity /// 0045687 // positive regulation of glial cell differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0045955 // negative regulation of calcium ion-dependent exocytosis // inferred from electronic annotation /// 0046427 // positive regulation of JAK-STAT cascade // inferred from sequence or structural similarity /// 0046533 // negative regulation of photoreceptor cell differentiation // inferred from electronic annotation /// 0048103 // somatic stem cell division // inferred from electronic annotation /// 0048663 // neuron fate commitment // inferred from electronic annotation /// 0048708 // astrocyte differentiation // inferred from electronic annotation /// 0048709 // oligodendrocyte differentiation // inferred from electronic annotation /// 0048711 // positive regulation of astrocyte differentiation // inferred from sequence or structural similarity /// 0048715 // negative regulation of oligodendrocyte differentiation // inferred from sequence or structural similarity /// 0048754 // branching morphogenesis of a tube // inferred from electronic annotation /// 0050678 // regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050767 // regulation of neurogenesis // inferred from electronic annotation /// 0050768 // negative regulation of neurogenesis // inferred from sequence or structural similarity /// 0050793 // regulation of developmental process // inferred from electronic annotation /// 0060253 // negative regulation of glial cell proliferation // inferred from sequence or structural similarity /// 0060528 // secretory columnal luminar epithelial cell differentiation involved in prostate glandular acinus development // inferred from electronic annotation /// 0060548 // negative regulation of cell death // inferred from electronic annotation /// 0060740 // prostate gland epithelium morphogenesis // inferred from electronic annotation /// 0060768 // regulation of epithelial cell proliferation involved in prostate gland development // inferred from electronic annotation /// 0061419 // positive regulation of transcription from RNA polymerase II promoter in response to hypoxia // inferred from sequence or structural similarity /// 0072602 // interleukin-4 secretion // inferred from electronic annotation /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0097150 // neuronal stem cell maintenance // inferred from expression pattern /// 2000737 // negative regulation of stem cell differentiation // inferred from mutant phenotype /// 2000811 // negative regulation of anoikis // inferred from mutant phenotype /// 2000974 // negative regulation of pro-B cell differentiation // inferred from sequence or structural similarity","0000139 // Golgi membrane // traceable author statement /// 0001669 // acrosomal vesicle // inferred from electronic annotation /// 0002193 // MAML1-RBP-Jkappa- ICN1 complex // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0001047 // core promoter binding // inferred from sequence or structural similarity /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0004857 // enzyme inhibitor activity // inferred from sequence or structural similarity /// 0004872 // receptor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from sequence or structural similarity /// 0031490 // chromatin DNA binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:139388895-139438556 (-) // 97.71 // q34.3"]
["11718446_at",-0.037697315,0.037697315,-0.12502861,-0.17461205,0.19544697,0.08462095,0.8047329,0.5546738,-1.0546967,-0.07682815,1.0546967,"down","SH3BGRL2",83699,"","0005634 // nucleus // inferred from electronic annotation","0017124 // SH3 domain binding // inferred from electronic annotation","chr6:80340821-80413577 (+) // 90.54 // q14.1"]
["11741772_a_at",-0.15001392,-0.008229256,-0.09496784,0.008229256,0.06762695,0.085419655,0.2392178,0.04349619,-1.1005024,-0.13816226,1.1005024,"down","TCEA2",6919,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006354 // transcription elongation, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006414 // translational elongation // inferred from electronic annotation /// 0032784 // regulation of transcription elongation, DNA-dependent // inferred from electronic annotation /// 0032784 // regulation of transcription elongation, DNA-dependent // non-traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0008023 // transcription elongation factor complex // non-traceable author statement","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:62688438-62703700 (+) // 93.92 // q13.33"]
["11725765_a_at",0.087599754,-0.023264408,0.36954474,-0.05009508,0.023264408,-0.10427666,0.51079047,0.19938718,1.1394433,0.1883291,1.1394433,"up","COL11A1",1301,"0001502 // cartilage condensation // inferred from electronic annotation /// 0001503 // ossification // inferred from electronic annotation /// 0002063 // chondrocyte development // inferred from electronic annotation /// 0003007 // heart morphogenesis // inferred from electronic annotation /// 0006029 // proteoglycan metabolic process // inferred from electronic annotation /// 0007601 // visual perception // inferred from mutant phenotype /// 0007605 // sensory perception of sound // inferred from mutant phenotype /// 0030198 // extracellular matrix organization // non-traceable author statement /// 0030199 // collagen fibril organization // non-traceable author statement /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0048704 // embryonic skeletal system morphogenesis // inferred from electronic annotation /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0050910 // detection of mechanical stimulus involved in sensory perception of sound // inferred from mutant phenotype /// 0051216 // cartilage development // inferred from electronic annotation /// 0055010 // ventricular cardiac muscle tissue morphogenesis // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005592 // collagen type XI // inferred from direct assay /// 0005592 // collagen type XI // non-traceable author statement /// 0031012 // extracellular matrix // inferred from electronic annotation","0005201 // extracellular matrix structural constituent // non-traceable author statement /// 0005201 // extracellular matrix structural constituent // inferred from electronic annotation /// 0030674 // protein binding, bridging // non-traceable author statement /// 0050840 // extracellular matrix binding // non-traceable author statement","chr1:103342028-103574052 (-) // 99.48 // p21.1"]
["11725498_a_at",0.071778774,-0.004041195,-0.006576538,0.079695225,0.0040416718,-0.109690666,0.8610102,0.65757954,1.0203317,0.029038291,1.0203317,"up","TMEM117",84216,"","0005783 // endoplasmic reticulum // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:44229601-44783541 (+) // 97.02 // q12"]
["11757330_x_at",-0.020634651,0.03138733,0.06542778,-0.20504475,-0.043429375,0.020634651,0.5476887,0.2301967,1.0727694,0.101339996,1.0727694,"up","SNRPC",6631,"0000387 // spliceosomal snRNP assembly // inferred from direct assay /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005685 // U1 snRNP // inferred from direct assay /// 0005685 // U1 snRNP // inferred from electronic annotation /// 0015030 // Cajal body // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003727 // single-stranded RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0030619 // U1 snRNA binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:34738067-34741571 (+) // 87.81 // p21.31"]
["11721557_a_at",0.05397439,-0.089530945,0.1961801,-0.043629408,-0.012707949,0.012708187,0.7468553,0.46345586,1.0483236,0.068084165,1.0483236,"up","ABCA8",10351,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from direct assay","chr17:66851530-66951524 (-) // 98.97 // q24.2"]
["11748819_x_at",-0.030238152,0.042773247,0.01884365,-0.018843174,-0.05425644,0.16905689,0.9174237,0.78145665,-1.0150326,-0.021526134,1.0150326,"down","FRMD1",79981,"","0005856 // cytoskeleton // inferred from electronic annotation","","chr6:168457668-168468203 (-) // 99.75 // q27"]
["11758369_x_at",0.08368015,-0.022859573,0.12270093,-0.46913457,-0.2046318,0.022859812,0.42211607,0.13468917,1.2126328,0.27814272,1.2126328,"up","HLA-DPB1",3115,"0002504 // antigen processing and presentation of peptide or polysaccharide antigen via MHC class II // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0031295 // T cell costimulation // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042613 // MHC class II protein complex // inferred from electronic annotation","0032395 // MHC class II receptor activity // traceable author statement","chr6:33052721-33054504 (+) // 72.1 // p21.32"]
["11731312_s_at",-0.04137063,0.04137039,0.31943774,-0.4541366,-0.095074415,0.27368045,0.7379662,0.44935334,1.1473637,0.19832273,1.1473637,"up","WISP3",8838,"0001558 // regulation of cell growth // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005625 // soluble fraction // traceable author statement","0005520 // insulin-like growth factor binding // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation","chr6:112375370-112390889 (+) // 94.96 // q21"]
["11745983_x_at",-0.035676956,-0.31133747,0.12507248,-0.35590744,0.08011055,0.035676956,0.99169,0.9758611,1.0042088,0.0060592773,1.0042088,"up","GRIA1",2890,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007616 // long-term memory // inferred from electronic annotation /// 0031623 // receptor internalization // inferred from electronic annotation /// 0035235 // ionotropic glutamate receptor signaling pathway // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from sequence or structural similarity /// 0014069 // postsynaptic density // inferred from sequence or structural similarity /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from sequence or structural similarity /// 0030054 // cell junction // inferred from electronic annotation /// 0030288 // outer membrane-bounded periplasmic space // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0032281 // alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex // inferred from sequence or structural similarity /// 0032281 // alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from sequence or structural similarity /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from sequence or structural similarity /// 0043197 // dendritic spine // inferred from electronic annotation /// 0044309 // neuron spine // inferred from sequence or structural similarity /// 0044309 // neuron spine // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004970 // ionotropic glutamate receptor activity // inferred from electronic annotation /// 0004971 // alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity // inferred from direct assay /// 0005215 // transporter activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005234 // extracellular-glutamate-gated ion channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008066 // glutamate receptor activity // traceable author statement /// 0015277 // kainate selective glutamate receptor activity // traceable author statement /// 0030165 // PDZ domain binding // inferred from sequence or structural similarity","chr5:152870220-153193239 (+) // 99.04 // q33.2"]
["11716711_a_at",0.09086704,0.018201828,-0.018201828,0.057326317,-0.13605118,-0.07980156,0.59507895,0.27488697,1.0593146,0.08313112,1.0593146,"up","TCEAL8",90843,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","","chrX:102507922-102510097 (-) // 53.79 // q22.1"]
["11742803_at",0.19672585,0.008509636,0.014219284,-0.085157394,-0.008509636,-0.037633896,0.44527936,0.14985979,1.0844162,0.116918504,1.0844162,"up","SRD5A1",6715,"0001655 // urogenital system development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006702 // androgen biosynthetic process // traceable author statement /// 0006702 // androgen biosynthetic process // inferred from electronic annotation /// 0007530 // sex determination // non-traceable author statement /// 0007548 // sex differentiation // inferred from electronic annotation /// 0008202 // steroid metabolic process // traceable author statement /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008209 // androgen metabolic process // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0009267 // cellular response to starvation // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014850 // response to muscle activity // inferred from electronic annotation /// 0016101 // diterpenoid metabolic process // inferred from electronic annotation /// 0021510 // spinal cord development // inferred from electronic annotation /// 0021766 // hippocampus development // inferred from electronic annotation /// 0021794 // thalamus development // inferred from electronic annotation /// 0021854 // hypothalamus development // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030539 // male genitalia development // inferred from electronic annotation /// 0030540 // female genitalia development // inferred from electronic annotation /// 0032354 // response to follicle-stimulating hormone stimulus // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0033574 // response to testosterone stimulus // inferred from electronic annotation /// 0042428 // serotonin metabolic process // inferred from electronic annotation /// 0042448 // progesterone metabolic process // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042747 // circadian sleep/wake cycle, REM sleep // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060348 // bone development // inferred from electronic annotation /// 0060416 // response to growth hormone stimulus // inferred from electronic annotation /// 0060992 // response to fungicide // inferred from electronic annotation /// 0071320 // cellular response to cAMP // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0071392 // cellular response to estradiol stimulus // inferred from electronic annotation /// 0071394 // cellular response to testosterone stimulus // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0071549 // cellular response to dexamethasone stimulus // inferred from electronic annotation /// 0071872 // cellular response to epinephrine stimulus // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043209 // myelin sheath // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070852 // cell body fiber // inferred from electronic annotation","0003865 // 3-oxo-5-alpha-steroid 4-dehydrogenase activity // inferred from direct assay /// 0003865 // 3-oxo-5-alpha-steroid 4-dehydrogenase activity // inferred from electronic annotation /// 0009055 // electron carrier activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016627 // oxidoreductase activity, acting on the CH-CH group of donors // inferred from electronic annotation /// 0033218 // amide binding // inferred from electronic annotation /// 0050213 // progesterone 5-alpha-reductase activity // inferred from electronic annotation /// 0070402 // NADPH binding // inferred from electronic annotation","chr5:6633433-6669673 (+) // 90.23 // p15.31"]
["11735979_at",-0.07000065,-0.0027580261,-0.12534714,0.059402466,0.25751972,0.0027580261,0.38522717,0.112070344,-1.1270843,-0.17259537,1.1270843,"down","OR52N4",390072,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:5775922-5776959 (+) // 99.71 // p15.4"]
["11723455_a_at",-0.36189318,0.020884037,-0.020884037,-0.2739787,0.2541051,0.34877968,0.68021137,0.37068474,-1.1730516,-0.23026647,1.1730516,"down","PI16",221476,"0006508 // proteolysis // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008233 // peptidase activity // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr6:36922208-36932613 (+) // 92.37 // p21.2"]
["11740933_a_at",0.0071372986,-0.16237354,-0.0071372986,0.19865799,-0.08568287,0.14696074,0.5622397,0.24321036,-1.1024933,-0.14076987,1.1024933,"down","FOXA2",3170,"0000432 // positive regulation of transcription from RNA polymerase II promoter by glucose // inferred from sequence or structural similarity /// 0000432 // positive regulation of transcription from RNA polymerase II promoter by glucose // inferred from electronic annotation /// 0000433 // negative regulation of transcription from RNA polymerase II promoter by glucose // inferred from sequence or structural similarity /// 0000433 // negative regulation of transcription from RNA polymerase II promoter by glucose // inferred from electronic annotation /// 0001701 // in utero embryonic development // not recorded /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001705 // ectoderm formation // not recorded /// 0001705 // ectoderm formation // inferred from electronic annotation /// 0001708 // cell fate specification // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0007492 // endoderm development // not recorded /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // not recorded /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0009953 // dorsal/ventral pattern formation // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010719 // negative regulation of epithelial to mesenchymal transition // inferred from mutant phenotype /// 0016568 // chromatin modification // inferred from electronic annotation /// 0021533 // cell differentiation in hindbrain // not recorded /// 0021533 // cell differentiation in hindbrain // inferred from electronic annotation /// 0021779 // oligodendrocyte cell fate commitment // not recorded /// 0021904 // dorsal/ventral neural tube patterning // not recorded /// 0021904 // dorsal/ventral neural tube patterning // inferred from electronic annotation /// 0023019 // signal transduction involved in regulation of gene expression // inferred from electronic annotation /// 0030193 // regulation of blood coagulation // inferred from direct assay /// 0030324 // lung development // inferred from electronic annotation /// 0031018 // endocrine pancreas development // not recorded /// 0031018 // endocrine pancreas development // inferred from direct assay /// 0031018 // endocrine pancreas development // inferred from electronic annotation /// 0032289 // central nervous system myelin formation // not recorded /// 0032525 // somite rostral/caudal axis specification // inferred from electronic annotation /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0033132 // negative regulation of glucokinase activity // inferred from sequence or structural similarity /// 0033132 // negative regulation of glucokinase activity // inferred from electronic annotation /// 0040019 // positive regulation of embryonic development // inferred from sequence or structural similarity /// 0040019 // positive regulation of embryonic development // inferred from electronic annotation /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0045665 // negative regulation of neuron differentiation // not recorded /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // not recorded /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0045945 // positive regulation of transcription from RNA polymerase III promoter // inferred from electronic annotation /// 0048468 // cell development // inferred from electronic annotation /// 0048646 // anatomical structure formation involved in morphogenesis // inferred from electronic annotation /// 0048665 // neuron fate specification // not recorded /// 0048665 // neuron fate specification // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // not recorded /// 0060441 // epithelial tube branching involved in lung morphogenesis // not recorded /// 0060441 // epithelial tube branching involved in lung morphogenesis // inferred from electronic annotation /// 0060487 // lung epithelial cell differentiation // not recorded /// 0060487 // lung epithelial cell differentiation // inferred from electronic annotation /// 0061178 // regulation of insulin secretion involved in cellular response to glucose stimulus // inferred from sequence or structural similarity /// 0061178 // regulation of insulin secretion involved in cellular response to glucose stimulus // inferred from electronic annotation /// 0070741 // response to interleukin-6 // traceable author statement /// 0071542 // dopaminergic neuron differentiation // inferred from electronic annotation /// 0090009 // primitive streak formation // inferred from sequence or structural similarity /// 0090009 // primitive streak formation // inferred from electronic annotation /// 2000049 // positive regulation of cell-cell adhesion mediated by cadherin // inferred by curator /// 2000543 // positive regulation of gastrulation // inferred from sequence or structural similarity /// 2000543 // positive regulation of gastrulation // inferred from electronic annotation /// 2000971 // negative regulation of detection of glucose // inferred from sequence or structural similarity /// 2000971 // negative regulation of detection of glucose // inferred from electronic annotation /// 2000976 // regulation of transcription from RNA polymerase II promoter involved in detection of glucose // inferred from sequence or structural similarity /// 2000976 // regulation of transcription from RNA polymerase II promoter involved in detection of glucose // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // not recorded /// 0005737 // cytoplasm // inferred from electronic annotation /// 0044464 // cell part // inferred from electronic annotation","0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // not recorded /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // not recorded /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008134 // transcription factor binding // not recorded /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008301 // DNA binding, bending // not recorded /// 0019904 // protein domain specific binding // not recorded /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from mutant phenotype /// 0046332 // SMAD binding // inferred from electronic annotation","chr20:22561642-22566099 (-) // 94.42 // p11.21"]
["11730917_at",0.02205658,-0.0067563057,0.08247042,-0.016621113,-0.12846136,0.0067567825,0.4930906,0.18577622,1.0560651,0.07869875,1.0560651,"up","TAF6L",10629,"0006338 // chromatin remodeling // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006352 // transcription initiation, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // inferred from electronic annotation","0000118 // histone deacetylase complex // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0030914 // STAGA complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0004402 // histone acetyltransferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr11:62538774-62554814 (+) // 94.94 // q12.3"]
["11760645_at",0.13410139,-0.049248934,-0.292454,-0.3599248,0.049248934,0.17973065,0.96659946,0.9064451,-1.0178691,-0.02555206,1.0178691,"down","GABRB1",2560,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0034220 // ion transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0034707 // chloride channel complex // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004890 // GABA-A receptor activity // inferred from electronic annotation /// 0004890 // GABA-A receptor activity // traceable author statement /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from electronic annotation","chr4:47033401-47035887 (+) // 99.95 // p12"]
["11724829_at",0.0143966675,0.066884995,-0.029352188,0.17183495,-0.07064438,-0.0143966675,0.9611921,0.88929886,-1.0080879,-0.011621402,1.0080879,"down","STS",412,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006687 // glycosphingolipid metabolic process // traceable author statement /// 0006706 // steroid catabolic process // traceable author statement /// 0007565 // female pregnancy // inferred from electronic annotation /// 0007611 // learning or memory // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008544 // epidermis development // traceable author statement /// 0009268 // response to pH // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0043588 // skin development // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0000299 // integral to membrane of membrane fraction // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005764 // lysosome // traceable author statement /// 0005768 // endosome // traceable author statement /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005792 // microsome // traceable author statement /// 0005794 // Golgi apparatus // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004773 // steryl-sulfatase activity // traceable author statement /// 0004773 // steryl-sulfatase activity // inferred from electronic annotation /// 0008484 // sulfuric ester hydrolase activity // inferred from direct assay /// 0008484 // sulfuric ester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:7137366-7272851 (+) // 87.9 // p22.31"]
["11722864_at",-0.095843315,-0.075201035,-0.12387657,0.17979431,0.118860245,0.075201035,0.06326749,0.0026336708,-1.1670978,-0.22292547,1.1670978,"down","NETO2",81831,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr16:47115430-47177911 (-) // 93.71 // q12.1"]
["11729108_a_at",-0.43428612,0.09340286,-0.037260532,-0.4144745,0.06208849,0.037260532,0.97515726,0.92907935,-1.0146668,-0.021006042,1.0146668,"down","MBP",4155,"0006955 // immune response // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007417 // central nervous system development // traceable author statement /// 0008366 // axon ensheathment // traceable author statement /// 0009636 // response to toxin // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation /// 0050771 // negative regulation of axonogenesis // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0033269 // internode region of axon // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043209 // myelin sheath // inferred from electronic annotation /// 0043218 // compact myelin // inferred from electronic annotation","0002020 // protease binding // inferred from electronic annotation /// 0019911 // structural constituent of myelin sheath // inferred from electronic annotation","chr18:74690789-74844774 (-) // 98.75 // q23"]
["11751331_a_at",0.01823473,0.027591228,-0.06766033,0.23474026,-0.02033043,-0.018234253,0.74741966,0.46440196,-1.0516611,-0.072669916,1.0516611,"down","DEPTOR",64798,"0006469 // negative regulation of protein kinase activity // inferred from mutant phenotype /// 0032007 // negative regulation of TOR signaling cascade // inferred from mutant phenotype /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from mutant phenotype /// 0045792 // negative regulation of cell size // inferred from mutant phenotype","0005622 // intracellular // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr8:120885961-121062283 (+) // 94.9 // q24.12"]
["11732785_a_at",0.19853592,0.07380295,0.09079838,-0.07380295,-0.13224125,-0.10760212,0.09190093,0.006089518,1.169259,0.22559448,1.169259,"up","C16orf45",89927,"","","","chr16:15596062-15682115 (+) // 86.27 // p13.11"]
["11758964_x_at",0.23999405,-0.036657333,0.036657333,0.19790745,-0.059030533,-0.09294319,0.845646,0.6284008,1.0458579,0.06468686,1.0458579,"up","PAFAH1B2",5049,"0006629 // lipid metabolic process // traceable author statement /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0016239 // positive regulation of macroautophagy // inferred from mutant phenotype","0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0003847 // 1-alkyl-2-acetylglycerophosphocholine esterase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr11:117014991-117041759 (+) // 90.13 // q23.3"]
["11743793_a_at",-0.060737133,0.100034714,-0.28972673,-0.22478819,0.1887312,0.060737133,0.83584154,0.61114126,-1.0656275,-0.091703154,1.0656275,"down","ZNF280B",140883,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr22:22838773-22863505 (-) // 87.7 // q11.22"]
["11753073_a_at",0.015730381,0.093615055,-0.015730381,-0.21199226,-0.058342457,0.027904987,0.53715426,0.22099552,1.0807366,0.112014994,1.0807366,"up","TNFSF4",7292,"0001816 // cytokine production // inferred from electronic annotation /// 0002215 // defense response to nematode // inferred from sequence or structural similarity /// 0002215 // defense response to nematode // inferred from electronic annotation /// 0002526 // acute inflammatory response // inferred from sequence or structural similarity /// 0002526 // acute inflammatory response // inferred from electronic annotation /// 0002726 // positive regulation of T cell cytokine production // inferred from sequence or structural similarity /// 0002726 // positive regulation of T cell cytokine production // inferred from electronic annotation /// 0002819 // regulation of adaptive immune response // inferred from sequence or structural similarity /// 0002819 // regulation of adaptive immune response // inferred from electronic annotation /// 0002830 // positive regulation of type 2 immune response // inferred from sequence or structural similarity /// 0002830 // positive regulation of type 2 immune response // inferred from electronic annotation /// 0002891 // positive regulation of immunoglobulin mediated immune response // inferred from sequence or structural similarity /// 0002891 // positive regulation of immunoglobulin mediated immune response // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0009615 // response to virus // inferred from sequence or structural similarity /// 0009615 // response to virus // inferred from electronic annotation /// 0032689 // negative regulation of interferon-gamma production // inferred from sequence or structural similarity /// 0032689 // negative regulation of interferon-gamma production // inferred from electronic annotation /// 0032700 // negative regulation of interleukin-17 production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0032733 // positive regulation of interleukin-10 production // inferred from sequence or structural similarity /// 0032733 // positive regulation of interleukin-10 production // inferred from electronic annotation /// 0032735 // positive regulation of interleukin-12 production // inferred from sequence or structural similarity /// 0032735 // positive regulation of interleukin-12 production // inferred from electronic annotation /// 0032736 // positive regulation of interleukin-13 production // inferred from sequence or structural similarity /// 0032736 // positive regulation of interleukin-13 production // inferred from electronic annotation /// 0032743 // positive regulation of interleukin-2 production // inferred from electronic annotation /// 0032753 // positive regulation of interleukin-4 production // inferred from direct assay /// 0032753 // positive regulation of interleukin-4 production // inferred from electronic annotation /// 0032755 // positive regulation of interleukin-6 production // inferred from direct assay /// 0032755 // positive regulation of interleukin-6 production // inferred from electronic annotation /// 0035708 // interleukin-4-dependent isotype switching to IgE isotypes // inferred from sequence or structural similarity /// 0035708 // interleukin-4-dependent isotype switching to IgE isotypes // inferred from electronic annotation /// 0035709 // memory T cell activation // inferred from sequence or structural similarity /// 0035709 // memory T cell activation // inferred from electronic annotation /// 0035712 // T-helper 2 cell activation // inferred from sequence or structural similarity /// 0035712 // T-helper 2 cell activation // inferred from electronic annotation /// 0042098 // T cell proliferation // inferred from electronic annotation /// 0042104 // positive regulation of activated T cell proliferation // inferred from electronic annotation /// 0042221 // response to chemical stimulus // inferred from sequence or structural similarity /// 0042221 // response to chemical stimulus // inferred from electronic annotation /// 0043372 // positive regulation of CD4-positive, alpha-beta T cell differentiation // inferred from sequence or structural similarity /// 0043372 // positive regulation of CD4-positive, alpha-beta T cell differentiation // inferred from electronic annotation /// 0043382 // positive regulation of memory T cell differentiation // inferred from sequence or structural similarity /// 0043382 // positive regulation of memory T cell differentiation // inferred from electronic annotation /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0045590 // negative regulation of regulatory T cell differentiation // inferred from sequence or structural similarity /// 0045590 // negative regulation of regulatory T cell differentiation // inferred from electronic annotation /// 0045626 // negative regulation of T-helper 1 cell differentiation // inferred from sequence or structural similarity /// 0045626 // negative regulation of T-helper 1 cell differentiation // inferred from electronic annotation /// 0045630 // positive regulation of T-helper 2 cell differentiation // inferred from sequence or structural similarity /// 0045630 // positive regulation of T-helper 2 cell differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0046641 // positive regulation of alpha-beta T cell proliferation // inferred from sequence or structural similarity /// 0046641 // positive regulation of alpha-beta T cell proliferation // inferred from electronic annotation /// 0050710 // negative regulation of cytokine secretion // inferred from electronic annotation /// 0050727 // regulation of inflammatory response // inferred from sequence or structural similarity /// 0050727 // regulation of inflammatory response // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred from direct assay /// 0050871 // positive regulation of B cell activation // inferred from sequence or structural similarity /// 0050871 // positive regulation of B cell activation // inferred from electronic annotation /// 0051024 // positive regulation of immunoglobulin secretion // inferred from sequence or structural similarity /// 0051024 // positive regulation of immunoglobulin secretion // inferred from electronic annotation /// 0071222 // cellular response to lipopolysaccharide // inferred from direct assay /// 0071380 // cellular response to prostaglandin E stimulus // inferred from direct assay /// 0071954 // chemokine (C-C motif) ligand 11 production // inferred from sequence or structural similarity /// 0071954 // chemokine (C-C motif) ligand 11 production // inferred from electronic annotation /// 1900281 // positive regulation of CD4-positive, alpha beta T cell costimulation // inferred from sequence or structural similarity /// 2000525 // positive regulation of T cell costimulation // inferred from electronic annotation","0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005102 // receptor binding // traceable author statement /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005164 // tumor necrosis factor receptor binding // inferred from electronic annotation /// 0032813 // tumor necrosis factor receptor superfamily binding // inferred from sequence or structural similarity /// 0032813 // tumor necrosis factor receptor superfamily binding // inferred from electronic annotation","chr1:173154837-173174612 (-) // 92.58 // q25.1"]
["11719718_a_at",-0.27568984,-0.13393044,0.111411095,-0.076933146,0.12191439,0.07693291,0.65171707,0.33572105,-1.1019365,-0.14004104,1.1019365,"down","SYK",6850,"0000187 // activation of MAPK activity // inferred from electronic annotation /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001820 // serotonin secretion // inferred from electronic annotation /// 0001945 // lymph vessel development // inferred from sequence or structural similarity /// 0001945 // lymph vessel development // inferred from electronic annotation /// 0002250 // adaptive immune response // inferred from sequence or structural similarity /// 0002281 // macrophage activation involved in immune response // inferred from sequence or structural similarity /// 0002281 // macrophage activation involved in immune response // inferred from electronic annotation /// 0002283 // neutrophil activation involved in immune response // inferred from sequence or structural similarity /// 0002283 // neutrophil activation involved in immune response // inferred from electronic annotation /// 0002366 // leukocyte activation involved in immune response // inferred from sequence or structural similarity /// 0002366 // leukocyte activation involved in immune response // inferred from electronic annotation /// 0002554 // serotonin secretion by platelet // inferred from sequence or structural similarity /// 0002554 // serotonin secretion by platelet // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007159 // leukocyte cell-cell adhesion // inferred from direct assay /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007167 // enzyme linked receptor protein signaling pathway // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from sequence or structural similarity /// 0007229 // integrin-mediated signaling pathway // non-traceable author statement /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0009887 // organ morphogenesis // traceable author statement /// 0010543 // regulation of platelet activation // inferred from sequence or structural similarity /// 0010543 // regulation of platelet activation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0019370 // leukotriene biosynthetic process // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030593 // neutrophil chemotaxis // inferred from direct assay /// 0032928 // regulation of superoxide anion generation // inferred from sequence or structural similarity /// 0032928 // regulation of superoxide anion generation // inferred from electronic annotation /// 0033630 // positive regulation of cell adhesion mediated by integrin // inferred from sequence or structural similarity /// 0033630 // positive regulation of cell adhesion mediated by integrin // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from sequence or structural similarity /// 0042742 // defense response to bacterium // inferred from electronic annotation /// 0043306 // positive regulation of mast cell degranulation // inferred from electronic annotation /// 0043313 // regulation of neutrophil degranulation // inferred from sequence or structural similarity /// 0043313 // regulation of neutrophil degranulation // inferred from electronic annotation /// 0043366 // beta selection // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // inferred from sequence or structural similarity /// 0045087 // innate immune response // inferred from electronic annotation /// 0045401 // positive regulation of interleukin-3 biosynthetic process // inferred from electronic annotation /// 0045425 // positive regulation of granulocyte macrophage colony-stimulating factor biosynthetic process // inferred from electronic annotation /// 0045579 // positive regulation of B cell differentiation // inferred from electronic annotation /// 0045588 // positive regulation of gamma-delta T cell differentiation // inferred from electronic annotation /// 0045780 // positive regulation of bone resorption // inferred from sequence or structural similarity /// 0045780 // positive regulation of bone resorption // inferred from electronic annotation /// 0046638 // positive regulation of alpha-beta T cell differentiation // inferred from electronic annotation /// 0046641 // positive regulation of alpha-beta T cell proliferation // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048514 // blood vessel morphogenesis // inferred from sequence or structural similarity /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0050715 // positive regulation of cytokine secretion // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050764 // regulation of phagocytosis // inferred from sequence or structural similarity /// 0050764 // regulation of phagocytosis // inferred from electronic annotation /// 0050776 // regulation of immune response // inferred from electronic annotation /// 0050850 // positive regulation of calcium-mediated signaling // inferred from electronic annotation /// 0050853 // B cell receptor signaling pathway // inferred from sequence or structural similarity /// 0050853 // B cell receptor signaling pathway // inferred from electronic annotation /// 0070372 // regulation of ERK1 and ERK2 cascade // inferred from sequence or structural similarity /// 0070372 // regulation of ERK1 and ERK2 cascade // inferred from electronic annotation /// 0071226 // cellular response to molecule of fungal origin // inferred from sequence or structural similarity /// 0071226 // cellular response to molecule of fungal origin // inferred from electronic annotation /// 0090237 // regulation of arachidonic acid secretion // inferred from sequence or structural similarity /// 0090237 // regulation of arachidonic acid secretion // inferred from electronic annotation /// 0090330 // regulation of platelet aggregation // inferred from sequence or structural similarity /// 0090330 // regulation of platelet aggregation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred by curator /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019815 // B cell receptor complex // inferred from electronic annotation /// 0032009 // early phagosome // inferred from sequence or structural similarity /// 0032009 // early phagosome // inferred from electronic annotation /// 0042101 // T cell receptor complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // non-traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from direct assay /// 0004715 // non-membrane spanning protein tyrosine kinase activity // traceable author statement /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from electronic annotation /// 0004716 // receptor signaling protein tyrosine kinase activity // inferred from electronic annotation /// 0005178 // integrin binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation","chr9:93563911-93660831 (+) // 92.48 // q22.2"]
["11753335_a_at",-0.12440252,0.040668488,0.012977123,0.0007715225,-0.03957939,-0.00077199936,0.9477093,0.85333616,-1.0072294,-0.010392367,1.0072294,"down","TMEM177",80775,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:120436745-120439522 (+) // 93.72 // q14.2"]
["11739664_at",-0.049518585,0.027329922,0.1980319,-0.22040415,-0.027329922,0.25751114,0.90159583,0.7420463,1.0391151,0.055355426,1.0391151,"up","RIMS3",9783,"0006810 // transport // inferred from electronic annotation /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0017156 // calcium ion-dependent exocytosis // inferred from electronic annotation","0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","","chr1:41085510-41131384 (-) // 95.93 // p34.2"]
["11763924_at",-0.08904505,-0.13159752,-0.017312527,0.017312527,0.025399685,0.20019579,0.32263944,0.07892676,-1.11751,-0.1602877,1.11751,"down","SNORD9",692053,"","","","chr14:21860300-21860550 (-) // 99.37 // q11.2"]
["11747904_a_at",-0.42091608,0.02708292,-0.027083397,-0.3502884,0.060038567,0.02708292,0.9245399,0.79877853,-1.0371202,-0.05258314,1.0371202,"down","PIP5K1C",23396,"0006887 // exocytosis // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0006909 // phagocytosis // traceable author statement /// 0006909 // phagocytosis // inferred from electronic annotation /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0016079 // synaptic vesicle exocytosis // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016337 // cell-cell adhesion // traceable author statement /// 0030036 // actin cytoskeleton organization // traceable author statement /// 0030593 // neutrophil chemotaxis // traceable author statement /// 0034333 // adherens junction assembly // traceable author statement /// 0046488 // phosphatidylinositol metabolic process // inferred from electronic annotation /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation /// 0048488 // synaptic vesicle endocytosis // traceable author statement /// 0072583 // clathrin-mediated endocytosis // traceable author statement","0001891 // phagocytic cup // inferred from electronic annotation /// 0001931 // uropod // traceable author statement /// 0001931 // uropod // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0005925 // focal adhesion // traceable author statement /// 0005925 // focal adhesion // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016307 // phosphatidylinositol phosphate kinase activity // inferred from electronic annotation /// 0016308 // 1-phosphatidylinositol-4-phosphate 5-kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr19:3632873-3700477 (-) // 98.48 // p13.3"]
["11736814_at",0.12886357,0.031852245,-0.042860985,0.019906044,-0.019906282,-0.09999466,0.61935955,0.29931936,1.0516223,0.0726166,1.0516223,"up","GIPC2",54810,"","0005737 // cytoplasm // inferred from electronic annotation","","chr1:78511558-78603111 (+) // 98.37 // p31.1"]
["11756574_x_at",0.23122787,-0.07233524,-0.16668701,0.17726803,-0.12048626,0.07233524,0.9148108,0.77374226,-1.032139,-0.045637194,1.032139,"down","RNF167",26001,"0000209 // protein polyubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0045786 // negative regulation of cell cycle // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:4843360-4848467 (+) // 99.52 // p13.2"]
["11730586_at",0.08591843,0.002216816,-0.45040178,0.02174902,-0.002216816,-0.08048582,0.8220851,0.58518744,-1.0720986,-0.10043761,1.0720986,"down","GATA5",140628,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0060575 // intestinal epithelial cell differentiation // inferred from direct assay /// 0071773 // cellular response to BMP stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0001158 // enhancer sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:61038552-61051026 (-) // 92.92 // q13.33"]
["11732193_a_at",-0.091165066,-0.43185997,-0.26787853,0.4039173,0.36769152,0.091165066,0.14878899,0.016757943,-1.4653302,-0.55122584,1.4653302,"down","MLF1",4291,"0002318 // myeloid progenitor cell differentiation // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-dependent // inferred from sequence or structural similarity /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from direct assay","chr3:158288869-158324252 (+) // 98.31 // q25.32"]
["11752695_a_at",0.08507705,-0.16556025,-0.08113575,-0.029807806,0.08243966,0.029808044,0.6790281,0.36910424,-1.0580097,-0.08135291,1.0580097,"down","SASH3",54440,"0002639 // positive regulation of immunoglobulin production // inferred from electronic annotation /// 0002726 // positive regulation of T cell cytokine production // inferred from electronic annotation /// 0002821 // positive regulation of adaptive immune response // inferred from electronic annotation /// 0030890 // positive regulation of B cell proliferation // inferred from electronic annotation /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0032733 // positive regulation of interleukin-10 production // inferred from electronic annotation /// 0032743 // positive regulation of interleukin-2 production // inferred from electronic annotation /// 0032753 // positive regulation of interleukin-4 production // inferred from electronic annotation /// 0032760 // positive regulation of tumor necrosis factor production // inferred from electronic annotation /// 0042102 // positive regulation of T cell proliferation // inferred from electronic annotation /// 0043372 // positive regulation of CD4-positive, alpha-beta T cell differentiation // inferred from electronic annotation /// 0046622 // positive regulation of organ growth // inferred from electronic annotation /// 0048873 // homeostasis of number of cells within a tissue // inferred from electronic annotation /// 0051251 // positive regulation of lymphocyte activation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","","chrX:128913893-128928745 (+) // 97.75 // q26.1"]
["11744749_a_at",-0.06345463,-0.076052666,-0.10804939,0.2190094,0.06345415,0.113565445,0.12060009,0.010863284,-1.1603247,-0.21452856,1.1603247,"down","DNAJC11",55735,"0006457 // protein folding // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation","0031072 // heat shock protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr1:6694603-6761876 (-) // 96.26 // p36.31"]
["11733370_a_at",0.09015274,0.00399971,-0.028429031,0.08377075,-0.00399971,-0.15416527,0.8199939,0.5813898,1.0329038,0.04670588,1.0329038,"up","PSME1",5720,"0000075 // cell cycle checkpoint // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0010950 // positive regulation of endopeptidase activity // inferred from electronic annotation /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019884 // antigen processing and presentation of exogenous antigen // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement","0000502 // proteasome complex // traceable author statement /// 0000502 // proteasome complex // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0008537 // proteasome activator complex // inferred from electronic annotation","0061133 // endopeptidase activator activity // inferred from electronic annotation","chr14:24605377-24608173 (+) // 98.02 // q12"]
["11727559_at",-0.013774872,-0.021241188,0.013774395,0.046923637,-0.10314751,0.015769005,0.96371645,0.89808345,1.004449,0.0064043286,1.004449,"up","FKBP7",51661,"0000413 // protein peptidyl-prolyl isomerization // not recorded /// 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006457 // protein folding // inferred from electronic annotation /// 0018208 // peptidyl-proline modification // not recorded","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation /// 0016020 // membrane // not recorded","0003755 // peptidyl-prolyl cis-trans isomerase activity // not recorded /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005528 // FK506 binding // not recorded /// 0016853 // isomerase activity // inferred from electronic annotation","chr2:179328314-179343356 (-) // 86.67 // q31.2"]
["11719821_a_at",0.10481453,-0.09709358,-0.31395388,0.09709358,0.18694353,-0.18318176,0.7419523,0.45564976,-1.0986228,-0.13569613,1.0986228,"down","CLN5",1203,"0006465 // signal peptide processing // inferred from direct assay /// 0007040 // lysosome organization // inferred from electronic annotation /// 0007042 // lysosomal lumen acidification // inferred from mutant phenotype /// 0007420 // brain development // inferred from expression pattern /// 0007601 // visual perception // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from expression pattern /// 0030163 // protein catabolic process // non-traceable author statement /// 0042551 // neuron maturation // non-traceable author statement /// 0070085 // glycosylation // inferred from direct assay","0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005775 // vacuolar lumen // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // non-traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0005537 // mannose binding // inferred from direct assay","chr13:77564794-77576651 (+) // 86.05 // q22.3"]
["11753677_a_at",-0.07629681,0.15426254,-0.099758625,0.07629728,-0.14079237,0.21326637,0.87533504,0.6869414,-1.0401955,-0.056854654,1.0401955,"down","WNT5A",7474,"0000187 // activation of MAPK activity // inferred from direct assay /// 0001667 // ameboidal cell migration // inferred from electronic annotation /// 0001736 // establishment of planar polarity // inferred from electronic annotation /// 0001756 // somitogenesis // not recorded /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001837 // epithelial to mesenchymal transition // inferred from expression pattern /// 0001843 // neural tube closure // not recorded /// 0001843 // neural tube closure // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001947 // heart looping // not recorded /// 0001947 // heart looping // inferred from electronic annotation /// 0002009 // morphogenesis of an epithelium // inferred from electronic annotation /// 0002053 // positive regulation of mesenchymal cell proliferation // not recorded /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0002088 // lens development in camera-type eye // inferred from sequence or structural similarity /// 0002741 // positive regulation of cytokine secretion involved in immune response // inferred from mutant phenotype /// 0003323 // type B pancreatic cell development // not recorded /// 0003323 // type B pancreatic cell development // inferred from electronic annotation /// 0003344 // pericardium morphogenesis // not recorded /// 0003344 // pericardium morphogenesis // inferred from electronic annotation /// 0003401 // axis elongation // inferred from electronic annotation /// 0003408 // optic cup formation involved in camera-type eye development // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // inferred by curator /// 0007223 // Wnt receptor signaling pathway, calcium modulating pathway // inferred from direct assay /// 0007223 // Wnt receptor signaling pathway, calcium modulating pathway // inferred from mutant phenotype /// 0007223 // Wnt receptor signaling pathway, calcium modulating pathway // inferred from electronic annotation /// 0007254 // JNK cascade // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // inferred from direct assay /// 0007257 // activation of JUN kinase activity // inferred from mutant phenotype /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // inferred from sequence or structural similarity /// 0007411 // axon guidance // inferred from electronic annotation /// 0007442 // hindgut morphogenesis // inferred from electronic annotation /// 0007494 // midgut development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008584 // male gonad development // inferred from expression pattern /// 0008584 // male gonad development // inferred from electronic annotation /// 0008595 // anterior/posterior axis specification, embryo // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0009950 // dorsal/ventral axis specification // not recorded /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from expression pattern /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010595 // positive regulation of endothelial cell migration // inferred from mutant phenotype /// 0010820 // positive regulation of T cell chemotaxis // inferred from mutant phenotype /// 0010976 // positive regulation of neuron projection development // inferred from sequence or structural similarity /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from direct assay /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0021891 // olfactory bulb interneuron development // inferred from sequence or structural similarity /// 0021891 // olfactory bulb interneuron development // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0022409 // positive regulation of cell-cell adhesion // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from sequence or structural similarity /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from expression pattern /// 0030324 // lung development // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030514 // negative regulation of BMP signaling pathway // not recorded /// 0030514 // negative regulation of BMP signaling pathway // inferred from electronic annotation /// 0030825 // positive regulation of cGMP metabolic process // inferred from direct assay /// 0030850 // prostate gland development // inferred from electronic annotation /// 0032148 // activation of protein kinase B activity // inferred from direct assay /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0032755 // positive regulation of interleukin-6 production // inferred from mutant phenotype /// 0032755 // positive regulation of interleukin-6 production // inferred from electronic annotation /// 0033574 // response to testosterone stimulus // inferred from electronic annotation /// 0034613 // cellular protein localization // inferred from direct assay /// 0034613 // cellular protein localization // inferred from electronic annotation /// 0035108 // limb morphogenesis // inferred from electronic annotation /// 0035121 // tail morphogenesis // not recorded /// 0035121 // tail morphogenesis // inferred from electronic annotation /// 0040037 // negative regulation of fibroblast growth factor receptor signaling pathway // not recorded /// 0040037 // negative regulation of fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0042060 // wound healing // inferred from direct assay /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0042733 // embryonic digit morphogenesis // not recorded /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0043032 // positive regulation of macrophage activation // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043507 // positive regulation of JUN kinase activity // inferred from electronic annotation /// 0045080 // positive regulation of chemokine biosynthetic process // inferred from mutant phenotype /// 0045599 // negative regulation of fat cell differentiation // inferred from mutant phenotype /// 0045732 // positive regulation of protein catabolic process // inferred from genetic interaction /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype /// 0045778 // positive regulation of ossification // inferred from mutant phenotype /// 0045836 // positive regulation of meiosis // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0046330 // positive regulation of JNK cascade // not recorded /// 0046330 // positive regulation of JNK cascade // inferred from electronic annotation /// 0046546 // development of primary male sexual characteristics // inferred from electronic annotation /// 0048146 // positive regulation of fibroblast proliferation // inferred from direct assay /// 0048286 // lung alveolus development // inferred from electronic annotation /// 0048546 // digestive tract morphogenesis // not recorded /// 0048546 // digestive tract morphogenesis // inferred from electronic annotation /// 0048706 // embryonic skeletal system development // inferred from mutant phenotype /// 0048806 // genitalia development // inferred from mutant phenotype /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0048843 // negative regulation of axon extension involved in axon guidance // inferred from electronic annotation /// 0048850 // hypophysis morphogenesis // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050680 // negative regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050718 // positive regulation of interleukin-1 beta secretion // inferred from mutant phenotype /// 0050718 // positive regulation of interleukin-1 beta secretion // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred from mutant phenotype /// 0050919 // negative chemotaxis // inferred from electronic annotation /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051216 // cartilage development // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051964 // negative regulation of synapse assembly // inferred from electronic annotation /// 0055093 // response to hyperoxia // inferred from electronic annotation /// 0060021 // palate development // inferred from mutant phenotype /// 0060026 // convergent extension // inferred from electronic annotation /// 0060029 // convergent extension involved in organogenesis // not recorded /// 0060029 // convergent extension involved in organogenesis // inferred from electronic annotation /// 0060065 // uterus development // not recorded /// 0060065 // uterus development // inferred from electronic annotation /// 0060067 // cervix development // not recorded /// 0060067 // cervix development // inferred from electronic annotation /// 0060068 // vagina development // not recorded /// 0060068 // vagina development // inferred from electronic annotation /// 0060070 // canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0060071 // Wnt receptor signaling pathway, planar cell polarity pathway // not recorded /// 0060071 // Wnt receptor signaling pathway, planar cell polarity pathway // inferred from electronic annotation /// 0060157 // urinary bladder development // not recorded /// 0060157 // urinary bladder development // inferred from electronic annotation /// 0060210 // metestrus // inferred from electronic annotation /// 0060324 // face development // inferred from mutant phenotype /// 0060340 // positive regulation of type I interferon-mediated signaling pathway // inferred from direct assay /// 0060541 // respiratory system development // not recorded /// 0060599 // lateral sprouting involved in mammary gland duct morphogenesis // not recorded /// 0060599 // lateral sprouting involved in mammary gland duct morphogenesis // inferred from electronic annotation /// 0060606 // tube closure // inferred from electronic annotation /// 0060638 // mesenchymal-epithelial cell signaling // inferred from electronic annotation /// 0060686 // negative regulation of prostatic bud formation // inferred from electronic annotation /// 0060744 // mammary gland branching involved in thelarche // not recorded /// 0060744 // mammary gland branching involved in thelarche // inferred from electronic annotation /// 0060750 // epithelial cell proliferation involved in mammary gland duct elongation // not recorded /// 0060750 // epithelial cell proliferation involved in mammary gland duct elongation // inferred from electronic annotation /// 0060760 // positive regulation of response to cytokine stimulus // inferred from direct assay /// 0060762 // regulation of branching involved in mammary gland duct morphogenesis // not recorded /// 0060762 // regulation of branching involved in mammary gland duct morphogenesis // inferred from electronic annotation /// 0060907 // positive regulation of macrophage cytokine production // inferred from mutant phenotype /// 0061036 // positive regulation of cartilage development // not recorded /// 0061036 // positive regulation of cartilage development // inferred from electronic annotation /// 0061347 // planar cell polarity pathway involved in outflow tract morphogenesis // inferred from electronic annotation /// 0061348 // planar cell polarity pathway involved in ventricular septum morphogenesis // inferred from electronic annotation /// 0061349 // planar cell polarity pathway involved in cardiac right atrium morphogenesis // inferred from electronic annotation /// 0061350 // planar cell polarity pathway involved in cardiac muscle tissue morphogenesis // inferred from electronic annotation /// 0061354 // planar cell polarity pathway involved in pericardium morphogenesis // inferred from electronic annotation /// 0070245 // positive regulation of thymocyte apoptotic process // not recorded /// 0070245 // positive regulation of thymocyte apoptotic process // inferred from electronic annotation /// 0071219 // cellular response to molecule of bacterial origin // inferred from electronic annotation /// 0071222 // cellular response to lipopolysaccharide // inferred from expression pattern /// 0071277 // cellular response to calcium ion // inferred from expression pattern /// 0071300 // cellular response to retinoic acid // inferred from sequence or structural similarity /// 0071346 // cellular response to interferon-gamma // inferred from expression pattern /// 0071425 // hemopoietic stem cell proliferation // inferred from direct assay /// 0071425 // hemopoietic stem cell proliferation // inferred from electronic annotation /// 0071542 // dopaminergic neuron differentiation // not recorded /// 0071542 // dopaminergic neuron differentiation // inferred from electronic annotation /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from expression pattern /// 0072201 // negative regulation of mesenchymal cell proliferation // inferred from direct assay /// 0090009 // primitive streak formation // not recorded /// 0090009 // primitive streak formation // inferred from electronic annotation /// 0090037 // positive regulation of protein kinase C signaling cascade // inferred from mutant phenotype /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from direct assay /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from genetic interaction /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0090103 // cochlea morphogenesis // not recorded /// 0090103 // cochlea morphogenesis // inferred from electronic annotation /// 0090179 // planar cell polarity pathway involved in neural tube closure // inferred from electronic annotation /// 2000049 // positive regulation of cell-cell adhesion mediated by cadherin // inferred from electronic annotation /// 2000484 // positive regulation of interleukin-8 secretion // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // not recorded /// 0009986 // cell surface // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0003700 // sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0005102 // receptor binding // inferred from electronic annotation /// 0005109 // frizzled binding // inferred from physical interaction /// 0005109 // frizzled binding // inferred from electronic annotation /// 0005110 // frizzled-2 binding // not recorded /// 0005110 // frizzled-2 binding // inferred from electronic annotation /// 0005115 // receptor tyrosine kinase-like orphan receptor binding // inferred from physical interaction /// 0005125 // cytokine activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0048018 // receptor agonist activity // inferred by curator","chr3:55504054-55521099 (-) // 100.0 // p14.3"]
["11725427_a_at",-0.039488316,0.09206343,0.07769632,-0.25011468,-0.1999011,0.039488316,0.43228203,0.14146855,1.133093,0.18026628,1.133093,"up","ABLIM3",22885,"0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:148521045-148639999 (+) // 98.42 // q32"]
["11720707_at",-0.040768623,-0.013073921,0.025725365,0.006968498,0.1029644,-0.006968498,0.64831346,0.3314871,-1.0307496,-0.043693844,1.0307496,"down","BCCIP",56647,"0000079 // regulation of cyclin-dependent protein kinase activity // inferred from direct assay /// 0000079 // regulation of cyclin-dependent protein kinase activity // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0061101 // neuroendocrine cell differentiation // inferred from direct assay","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0019908 // nuclear cyclin-dependent protein kinase holoenzyme complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0019207 // kinase regulator activity // inferred from direct assay","chr10:127512106-127525120 (+) // 88.1 // q26.2"]
["11749233_s_at",0.02495861,-0.08710384,-0.02495861,0.38516808,0.061667442,-0.22460079,0.8284258,0.5956233,-1.0740885,-0.10311281,1.0740885,"down","NAP1L1",4673,"0006260 // DNA replication // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0006334 // nucleosome assembly // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005678 // chromatin assembly complex // traceable author statement /// 0042470 // melanosome // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr12:76441746-76478511 (-) // 97.33 // q21.2"]
["11725213_at",0.31057882,0.1609006,0.12486458,-0.12486458,-0.33146954,-0.25556326,0.09308662,0.0062547727,1.3529236,0.4360804,1.3529236,"up","METTL7B",196410,"0008152 // metabolic process // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation","","0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr12:56075329-56078395 (+) // 97.1 // q13.2"]
["11749274_a_at",-0.2821169,-0.0011920929,0.2301445,-0.28674126,0.0011920929,0.10130596,0.93769544,0.8279132,1.0307488,0.043692842,1.0307488,"up","RGL3",57139,"0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0008321 // Ral guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0017016 // Ras GTPase binding // inferred from electronic annotation","chr19:11512903-11529990 (-) // 99.11 // p13.2"]
["11756942_s_at",0.027107239,0.05634308,-0.027107239,-0.052067757,-0.096996784,0.16898537,0.962677,0.89426666,1.0084509,0.012140794,1.0084509,"up","ING5",84289,"0006260 // DNA replication // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006473 // protein acetylation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0016568 // chromatin modification // inferred from electronic annotation /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045926 // negative regulation of growth // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0070776 // MOZ/MORF histone acetyltransferase complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0035064 // methylated histone residue binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:242642331-242665822 (+) // 84.28 // q37.3"]
["11726527_s_at",-0.30618906,-0.4357443,-0.13888168,0.31925392,0.560761,0.13888168,0.13260467,0.013277917,-1.5510414,-0.6332372,1.5510414,"down","MFAP3L",9848,"","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr4:170907754-170947559 (-) // 94.32 // q33"]
["11716401_a_at",0.108449936,0.011539459,-0.07783413,0.023428917,-0.011539459,-0.042116165,0.878673,0.6939821,1.0168644,0.024127334,1.0168644,"up","SELENBP1",8991,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008430 // selenium binding // inferred from electronic annotation /// 0008430 // selenium binding // traceable author statement","chr1:151336779-151342455 (-) // 86.61 // q21.3"]
["11739149_a_at",0.120587826,0.050184727,-0.050184727,0.09648752,-0.12574673,-0.13114929,0.6684032,0.3562246,1.0670779,0.093665466,1.0670779,"up","SAMHD1",25939,"0006955 // immune response // non-traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation /// 0045088 // regulation of innate immune response // inferred from mutant phenotype /// 0051607 // defense response to virus // inferred from mutant phenotype","0005622 // intracellular // non-traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from direct assay /// 0003824 // catalytic activity // inferred from electronic annotation /// 0008081 // phosphoric diester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:35520346-35580304 (-) // 95.5 // q11.23"]
["11761075_a_at",-0.13672781,0.032039165,0.16702604,-0.22604418,-0.032039165,0.34512854,0.9889473,0.96738446,-1.005725,-0.008235914,1.005725,"down","SCP2",6342,"0006699 // bile acid biosynthetic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0007031 // peroxisome organization // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008206 // bile acid metabolic process // traceable author statement /// 0033540 // fatty acid beta-oxidation using acyl-CoA oxidase // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation /// 0005782 // peroxisomal matrix // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003824 // catalytic activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation /// 0032934 // sterol binding // inferred from electronic annotation /// 0033814 // propanoyl-CoA C-acyltransferase activity // inferred from electronic annotation","chr1:53480626-53514241 (+) // 53.71 // p32.3"]
["11717616_at",0.006836891,0.052567482,0.10809708,-0.14841652,-0.006836891,-0.10529709,0.25513443,0.049236435,1.103957,0.14268406,1.103957,"up","OXSR1",9943,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0006979 // response to oxidative stress // traceable author statement /// 0007243 // intracellular protein kinase cascade // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:38207010-38296979 (+) // 98.03 // p22.2"]
["11715316_x_at",-0.28745365,-0.034762383,0.06550312,-0.22845745,0.14940977,0.034762383,0.8660484,0.6684021,-1.0503056,-0.07080916,1.0503056,"down","HLA-C",3107,"0001539 // ciliary or flagellar motility // non-traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002480 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0050776 // regulation of immune response // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005858 // axonemal dynein complex // non-traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0031901 // early endosome membrane // traceable author statement /// 0042612 // MHC class I protein complex // inferred from electronic annotation /// 0071556 // integral to lumenal side of endoplasmic reticulum membrane // traceable author statement","0003777 // microtubule motor activity // non-traceable author statement /// 0032393 // MHC class I receptor activity // non-traceable author statement /// 0032395 // MHC class II receptor activity // non-traceable author statement","chr6:31236529-31239855 (-) // 98.77 // p21.33"]
["11716655_a_at",0.22810936,-0.06631565,-0.19889355,0.2632923,-0.3427515,0.06631565,0.99084425,0.97260815,-1.0055504,-0.007985371,1.0055504,"down","TRAF4",9618,"0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007585 // respiratory gaseous exchange // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030323 // respiratory tube development // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from direct assay /// 0046330 // positive regulation of JNK cascade // inferred from direct assay /// 0090073 // positive regulation of protein homodimerization activity // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0031996 // thioesterase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050699 // WW domain binding // inferred from physical interaction","chr17:27071001-27077974 (+) // 95.09 // q11.2"]
["11756266_a_at",-0.05019951,0.065838814,0.03374052,-0.118416786,-0.03374052,0.26434612,0.9541251,0.8711619,-1.0146178,-0.020936377,1.0146178,"down","CYFIP2",26999,"0006915 // apoptotic process // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0019717 // synaptosome // inferred from direct assay /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr5:156693096-156731458 (+) // 94.09 // q33.3"]
["11752756_s_at",0.033133507,0.0035767555,-0.0035767555,-0.35001183,-0.08428383,0.07322836,0.6635695,0.3490821,1.0953563,0.13140029,1.0953563,"up","TBC1D26 /// TBC1D28","254272 /// 353149","0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation","chr17:15635596-15644255 (+) // 99.81 // p12"]
["11717263_s_at",0.14891148,0.019624233,0.1717391,-0.01962471,-0.06149721,-0.07600212,0.19860603,0.030015063,1.1217877,0.16579963,1.1217877,"up","ATPAF1",64756,"0006461 // protein complex assembly // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:47098412-47134215 (-) // 77.03 // p33"]
["11751855_x_at",-0.06882286,0.07025242,-0.17229986,-0.14814615,0.10399914,0.06882286,0.81366605,0.57051367,-1.046217,-0.06518207,1.046217,"down","GSG1L",146395,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr16:27802690-27895891 (-) // 88.96 // p12.1"]
["11726245_s_at",-0.08627224,-0.018399239,0.0008583069,0.057527542,0.06317139,-0.0008583069,0.3444144,0.08956926,-1.0530335,-0.07455129,1.0530335,"down","HIST1H4A /// HIST1H4B /// HIST1H4C /// HIST1H4D /// HIST1H4E /// HIST1H4F /// HIST1H4H /// HIST1H4I /// HIST1H4J /// HIST1H4K /// HIST1H4L /// HIST2H4A /// HIST2H4B /// HIST4H4","121504 /// 554313 /// 8294 /// 8359 /// 8360 /// 8361 /// 8362 /// 8363 /// 8364 /// 8365 /// 8366 /// 8367 /// 8368 /// 8370","0000723 // telomere maintenance // traceable author statement /// 0006325 // chromatin organization // non-traceable author statement /// 0006334 // nucleosome assembly // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0045653 // negative regulation of megakaryocyte differentiation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement","0000786 // nucleosome // traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26104159-26104857 (+) // 75.87 // p22.2"]
["11729200_at",-0.013300896,-0.14147758,-0.025438309,0.20463657,0.16108894,0.013300896,0.27683365,0.058148272,-1.1379321,-0.18641442,1.1379321,"down","C6orf120",387263,"0006915 // apoptotic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","","chr6:170102215-170106454 (+) // 98.02 // q27"]
["11750164_a_at",-0.026779175,0.08693504,0.06624794,-0.033262253,0.026779175,-0.06894302,0.5202367,0.20720786,1.047737,0.06727663,1.047737,"up","SCRN3",79634,"0006508 // proteolysis // inferred from electronic annotation","","0016805 // dipeptidase activity // inferred from electronic annotation","chr2:175260472-175293145 (+) // 98.83 // q31.1"]
["11730515_a_at",0.065941334,0.18178034,0.206079,-0.06594181,-0.16524315,-0.080848694,0.10837207,0.008630727,1.1935658,0.25527814,1.1935658,"up","SGOL1",151648,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from direct assay /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0008608 // attachment of spindle microtubules to kinetochore // inferred from direct assay /// 0010457 // centriole-centriole cohesion // inferred from direct assay /// 0045132 // meiotic chromosome segregation // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from direct assay /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0000779 // condensed chromosome, centromeric region // inferred from direct assay /// 0000780 // condensed nuclear chromosome, centromeric region // inferred from electronic annotation /// 0000922 // spindle pole // inferred from direct assay /// 0000922 // spindle pole // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030892 // mitotic cohesin complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr3:20211546-20227683 (-) // 78.81 // p24.3"]
["11717833_a_at",-0.008865356,0.008865356,-0.030576706,-0.008865356,0.013868332,0.02461052,0.57401335,0.25419512,-1.014004,-0.020063331,1.014004,"down","TEX10",54881,"","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0071339 // MLL1 complex // inferred from direct assay","","chr9:103064365-103115259 (-) // 98.26 // q31.1"]
["11755928_s_at",-0.046966076,0.12773967,-0.036648035,-0.05135727,0.036648035,0.05668354,0.99697196,0.9918024,1.0004972,0.00071716134,1.0004972,"up","MMP1",4312,"0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030574 // collagen catabolic process // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from direct assay /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:102660650-102668889 (-) // 99.95 // q22.2"]
["11719582_at",-0.05894184,0.012096882,-0.09175062,0.05709839,-0.012096882,0.0344553,0.3975188,0.119460866,-1.0516715,-0.07268414,1.0516715,"down","RPP30",10556,"0008033 // tRNA processing // inferred from electronic annotation","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005655 // nucleolar ribonuclease P complex // traceable author statement /// 0005730 // nucleolus // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004526 // ribonuclease P activity // inferred from electronic annotation /// 0004526 // ribonuclease P activity // traceable author statement /// 0004540 // ribonuclease activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr10:92616277-92662772 (+) // 67.86 // q23.31"]
["11739313_a_at",0.034280777,-0.11569595,-0.12202263,0.3317337,0.17658997,-0.034280777,0.41081426,0.12752779,-1.1694473,-0.22582684,1.1694473,"down","PWP1",11137,"0006351 // transcription, DNA-dependent // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement","","chr12:108079559-108106257 (+) // 97.13 // q23.3"]
["11745111_a_at",-0.16233349,-0.15733957,0.13122845,-0.017402649,0.017402649,0.16233349,0.6665299,0.3537199,-1.0844218,-0.116925955,1.0844218,"down","DLGAP1",9229,"0007267 // cell-cell signaling // inferred from electronic annotation /// 0007268 // synaptic transmission // non-traceable author statement /// 0007268 // synaptic transmission // traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation","chr18:3708345-3880076 (-) // 98.15 // p11.31"]
["11716738_at",0.09016991,0.05934143,0.038217545,-0.038217545,-0.1384697,-0.16253948,0.1301478,0.012749979,1.1294746,0.17565188,1.1294746,"up","MSRB1",51734,"0030091 // protein repair // inferred from sequence or structural similarity /// 0030091 // protein repair // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000318 // protein-methionine-R-oxide reductase activity // inferred from electronic annotation /// 0008113 // peptide-methionine-(S)-S-oxide reductase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from sequence or structural similarity /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0033743 // peptide-methionine (R)-S-oxide reductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070191 // methionine-R-sulfoxide reductase activity // inferred from electronic annotation","chr16:1988239-1993327 (-) // 95.68 // p13.3"]
["11734425_a_at",-0.072822094,-0.045293808,0.080489635,-0.15089941,0.045293808,0.35211945,0.81421745,0.5713121,-1.0678532,-0.094713345,1.0678532,"down","CDH23 /// LOC100653137","100653137 /// 64072","0006816 // calcium ion transport // inferred from mutant phenotype /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from mutant phenotype /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0016339 // calcium-dependent cell-cell adhesion // non-traceable author statement /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0042491 // auditory receptor cell differentiation // inferred from electronic annotation /// 0045494 // photoreceptor cell maintenance // inferred from mutant phenotype /// 0048563 // post-embryonic organ morphogenesis // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050953 // sensory perception of light stimulus // inferred from mutant phenotype /// 0050953 // sensory perception of light stimulus // inferred from electronic annotation /// 0050957 // equilibrioception // inferred from mutant phenotype /// 0051480 // cytosolic calcium ion homeostasis // inferred from mutant phenotype /// 0060088 // auditory receptor cell stereocilium organization // inferred from electronic annotation","0001917 // photoreceptor inner segment // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032420 // stereocilium // inferred from sequence or structural similarity /// 0032420 // stereocilium // inferred from electronic annotation /// 0032426 // stereocilium bundle tip // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr10:73156703-73575704 (+) // 99.41 // q22.1"]
["11750394_x_at",0.4874339,0.0919199,-0.152174,0.08807707,-0.08807707,-0.17391396,0.6842552,0.37671092,1.1489887,0.20036463,1.1489887,"up","MED15",51586,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016592 // mediator complex // inferred from electronic annotation","0001104 // RNA polymerase II transcription cofactor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr22:20877929-20941363 (+) // 92.81 // q11.21"]
["11715230_s_at",0.33535624,0.26950645,0.11928511,-0.11928511,-0.17001581,-0.33800888,0.1052458,0.008051906,1.3665004,0.45048586,1.3665004,"up","PARD6A",50855,"0007049 // cell cycle // inferred from electronic annotation /// 0016032 // viral reproduction // traceable author statement /// 0034329 // cell junction assembly // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement /// 0045217 // cell-cell junction maintenance // inferred from sequence or structural similarity /// 0045217 // cell-cell junction maintenance // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0070830 // tight junction assembly // traceable author statement","0001726 // ruffle // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0005923 // tight junction // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation","0005080 // protein kinase C binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // traceable author statement /// 0017048 // Rho GTPase binding // inferred from sequence or structural similarity /// 0017048 // Rho GTPase binding // inferred from electronic annotation /// 0030742 // GTP-dependent protein binding // inferred from sequence or structural similarity /// 0030742 // GTP-dependent protein binding // inferred from electronic annotation","chr16:67694850-67696680 (+) // 91.99 // q22.1"]
["11725826_at",-0.47134805,0.047500134,0.13831377,-0.17041373,-0.047500134,0.2583642,0.8618478,0.65950763,-1.0782274,-0.10866148,1.0782274,"down","CD1D",912,"0006955 // immune response // inferred from electronic annotation /// 0016045 // detection of bacterium // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0034113 // heterotypic cell-cell adhesion // traceable author statement /// 0042102 // positive regulation of T cell proliferation // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045058 // T cell selection // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0045089 // positive regulation of innate immune response // traceable author statement /// 0048006 // antigen processing and presentation, endogenous lipid antigen via MHC class Ib // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred by curator /// 0030881 // beta-2-microglobulin binding // traceable author statement /// 0030882 // lipid antigen binding // inferred from direct assay /// 0030884 // exogenous lipid antigen binding // inferred from direct assay /// 0042393 // histone binding // inferred from physical interaction /// 0043499 // eukaryotic cell surface binding // inferred from direct assay /// 0050839 // cell adhesion molecule binding // inferred from physical interaction","chr1:158149667-158156214 (+) // 76.8 // q23.1"]
["11763858_a_at",-0.13877058,0.07701039,0.049340963,-0.041655064,-0.009470224,0.009470224,0.962755,0.8951301,1.0067778,0.009745257,1.0067778,"up","UTY",7404,"0016568 // chromatin modification // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrY:15470988-15471751 (-) // 100.0 // q11.221"]
["11763545_a_at",-0.3359313,0.030833721,-0.03083396,-0.03837681,0.2571144,0.16852236,0.4693552,0.16770141,-1.1818638,-0.24106376,1.1818638,"down","ATP10B",23120,"0006812 // cation transport // inferred from electronic annotation /// 0015914 // phospholipid transport // inferred from electronic annotation /// 0045332 // phospholipid translocation // non-traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004012 // phospholipid-translocating ATPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:160039246-160061565 (-) // 90.59 // q34"]
["11719555_a_at",0.27728558,0.16436481,0.09204197,-0.09204197,-0.28047752,-0.11576843,0.13178341,0.013128985,1.2663358,0.34066007,1.2663358,"up","PDK2",5164,"0000160 // two-component signal transduction system (phosphorelay) // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006006 // glucose metabolic process // traceable author statement /// 0006090 // pyruvate metabolic process // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0010510 // regulation of acetyl-CoA biosynthetic process from pyruvate // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018106 // peptidyl-histidine phosphorylation // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0045254 // pyruvate dehydrogenase complex // inferred from electronic annotation","0000155 // two-component sensor activity // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004673 // protein histidine kinase activity // inferred from electronic annotation /// 0004740 // pyruvate dehydrogenase (acetyl-transferring) kinase activity // inferred from electronic annotation /// 0004740 // pyruvate dehydrogenase (acetyl-transferring) kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr17:48172638-48188733 (+) // 98.66 // q21.33"]
["11737485_a_at",0.35561562,0.20674157,-0.19666338,-0.046431303,-0.07974577,0.046431065,0.7237423,0.42984262,1.1084011,0.14848,1.1084011,"up","C11orf65",160140,"","","","chr11:108253727-108338245 (-) // 91.31 // q22.3"]
["11758180_s_at",0.103263855,0.05144167,-0.036089897,0.036089897,-0.06697321,-0.1975007,0.53151387,0.21642552,1.0834755,0.115666494,1.0834755,"up","LOC100128551 /// ZDHHC14","100128551 /// 79683","","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:158094674-158094969 (+) // 96.39 // q25.3"]
["11717849_at",0.11764622,0.00091838837,-0.13947582,3.8146973e-6,-3.8146973e-6,-0.0458889,0.9711334,0.91792,1.0057877,0.008325859,1.0057877,"up","CCDC167",154467,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:37450714-37467700 (-) // 94.06 // p21.2"]
["11720520_s_at",0.122229576,0.0072131157,-0.19371939,-0.16037846,0.008667469,-0.0072131157,0.91786873,0.78259015,1.022109,0.0315491,1.022109,"up","LOC728802 /// PDE4DIP","728802 /// 9659","0043623 // cellular protein complex assembly // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // inferred from sequence or structural similarity /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030016 // myofibril // inferred from sequence or structural similarity","0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from sequence or structural similarity","chr1:144851426-144995033 (-) // 98.32 // q21.1"]
["11728832_at",-0.6288657,-0.056022167,0.056022167,-0.23144102,0.116989136,0.08093166,0.7406291,0.45341885,-1.1474637,-0.19844848,1.1474637,"down","DSG3",1830,"0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030057 // desmosome // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr18:29027731-29058668 (+) // 92.88 // q12.1"]
["11746693_a_at",0.308702,-0.011618137,0.011618137,0.079814434,-0.31814623,-0.35804176,0.4550993,0.15741427,1.232589,0.30169183,1.232589,"up","COBL",23242,"0001843 // neural tube closure // inferred from electronic annotation","","0003779 // actin binding // inferred from electronic annotation","chr7:51085032-51384430 (-) // 99.95 // p12.1"]
["11763705_at",-0.08535862,0.21672916,-0.0020523071,-0.37960863,0.027693748,0.0020523071,0.68223137,0.37345716,1.1170757,0.15972693,1.1170757,"up","LOC100506379",100506379,"","","","chr6:10743556-10747802 (-) // 99.73 // p24.2"]
["11760021_at",-0.13368392,-0.08267665,0.16303945,0.15414047,0.035009146,-0.035009146,0.8039266,0.5531268,-1.0491012,-0.0691539,1.0491012,"down","CTNNA3",29119,"0007155 // cell adhesion // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from physical interaction","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005916 // fascia adherens // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0045296 // cadherin binding // inferred from electronic annotation /// 0045296 // cadherin binding // traceable author statement","chr10:68935242-69425512 (-) // 74.83 // q21.3"]
["11760933_at",0.10934353,0.18063116,0.10161018,-0.2664585,-0.10161018,-0.1747632,0.078825064,0.004458072,1.2409735,0.31147227,1.2409735,"up","HSD17B7P2",158160,"0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation","chr1:162760493-162763188 (+) // 63.09 // q23.3 /// chr10:38645285-38647980 (+) // 64.46 // p11.1"]
["11746224_a_at",0.03609276,0.012680054,0.019981384,-0.157341,-0.14622164,-0.012680531,0.26272178,0.052384794,1.0930296,0.1283325,1.0930296,"up","SAYSD1",55776,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","","chr6:39072668-39082905 (-) // 79.53 // p21.2"]
["11762804_x_at",0.61234856,-0.11286974,0.221488,-0.037922382,-0.14557648,0.037922382,0.5723307,0.25252303,1.2216642,0.28884777,1.2216642,"up","APP",351,"0000085 // G2 phase of mitotic cell cycle // inferred from sequence or structural similarity /// 0000085 // G2 phase of mitotic cell cycle // inferred from electronic annotation /// 0001967 // suckling behavior // inferred from electronic annotation /// 0002576 // platelet degranulation // traceable author statement /// 0006378 // mRNA polyadenylation // inferred from sequence or structural similarity /// 0006378 // mRNA polyadenylation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from sequence or structural similarity /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006878 // cellular copper ion homeostasis // inferred from sequence or structural similarity /// 0006878 // cellular copper ion homeostasis // inferred from electronic annotation /// 0006897 // endocytosis // inferred from sequence or structural similarity /// 0006897 // endocytosis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007176 // regulation of epidermal growth factor-activated receptor activity // inferred from sequence or structural similarity /// 0007176 // regulation of epidermal growth factor-activated receptor activity // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from sequence or structural similarity /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0007617 // mating behavior // inferred from sequence or structural similarity /// 0007617 // mating behavior // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from sequence or structural similarity /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0008088 // axon cargo transport // inferred from sequence or structural similarity /// 0008088 // axon cargo transport // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from sequence or structural similarity /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0008542 // visual learning // inferred from sequence or structural similarity /// 0008542 // visual learning // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010952 // positive regulation of peptidase activity // inferred from electronic annotation /// 0016199 // axon midline choice point recognition // inferred from sequence or structural similarity /// 0016199 // axon midline choice point recognition // inferred from electronic annotation /// 0016322 // neuron remodeling // inferred from sequence or structural similarity /// 0016322 // neuron remodeling // inferred from electronic annotation /// 0016358 // dendrite development // inferred from sequence or structural similarity /// 0016358 // dendrite development // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030198 // extracellular matrix organization // inferred from sequence or structural similarity /// 0030900 // forebrain development // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0031175 // neuron projection development // inferred from electronic annotation /// 0035235 // ionotropic glutamate receptor signaling pathway // inferred from sequence or structural similarity /// 0035235 // ionotropic glutamate receptor signaling pathway // inferred from electronic annotation /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0040014 // regulation of multicellular organism growth // inferred from sequence or structural similarity /// 0040014 // regulation of multicellular organism growth // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045931 // positive regulation of mitotic cell cycle // inferred from sequence or structural similarity /// 0045931 // positive regulation of mitotic cell cycle // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048669 // collateral sprouting in absence of injury // inferred from sequence or structural similarity /// 0048669 // collateral sprouting in absence of injury // inferred from electronic annotation /// 0050803 // regulation of synapse structure and activity // inferred from sequence or structural similarity /// 0050803 // regulation of synapse structure and activity // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation /// 0051124 // synaptic growth at neuromuscular junction // inferred from electronic annotation /// 0051402 // neuron apoptotic process // inferred from mutant phenotype /// 0051563 // smooth endoplasmic reticulum calcium ion homeostasis // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // traceable author statement /// 0005905 // coated pit // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from sequence or structural similarity /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030424 // axon // inferred from sequence or structural similarity /// 0030424 // axon // inferred from electronic annotation /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0035253 // ciliary rootlet // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from direct assay /// 0043198 // dendritic shaft // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation /// 0045202 // synapse // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0051233 // spindle midzone // inferred from electronic annotation","0003677 // DNA binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from direct assay /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016504 // peptidase activator activity // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation /// 0033130 // acetylcholine receptor binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046914 // transition metal ion binding // inferred from electronic annotation /// 0051425 // PTB domain binding // inferred from physical interaction","chr21:26968486-27543064 (-) // 65.5 // q21.3"]
["11739967_a_at",-0.49732447,0.11534262,0.22024775,-0.35328484,0.19093895,-0.11534262,0.96271914,0.8945034,1.0271533,0.03865145,1.0271533,"up","DNAJC24",120526,"0006457 // protein folding // inferred from electronic annotation","","0031072 // heat shock protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr11:31391376-31454382 (+) // 74.4 // p13"]
["11718090_a_at",0.24740124,0.12636757,-0.02329731,0.02329731,-0.031245232,-0.24488163,0.44591233,0.15043391,1.1495748,0.20110029,1.1495748,"up","TPCN1",53373,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from direct assay /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0072345 // NAADP-sensitive calcium-release channel activity // inferred from direct assay","chr12:113659259-113736390 (+) // 94.5 // q24.13"]
["11741466_a_at",0.021314144,-0.20414448,0.0027513504,-0.04187107,-0.0027513504,0.09830713,0.7047844,0.40333727,-1.0554961,-0.07792124,1.0554961,"down","KCND3",3752,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // traceable author statement /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0008076 // voltage-gated potassium channel complex // inferred from electronic annotation /// 0008076 // voltage-gated potassium channel complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005249 // voltage-gated potassium channel activity // inferred from electronic annotation /// 0005250 // A-type (transient outward) potassium channel activity // inferred from electronic annotation /// 0005250 // A-type (transient outward) potassium channel activity // traceable author statement /// 0005267 // potassium channel activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:112318441-112531777 (-) // 99.3 // p13.2"]
["11739773_a_at",-0.066823006,0.051243782,-0.028809547,-0.25301456,0.028809547,0.22099113,0.97444713,0.92763793,-1.0095588,-0.013724936,1.0095588,"down","SNX20",124460,"0006810 // transport // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr16:50700210-50715264 (-) // 64.96 // q12.1"]
["11731785_at",0.009446621,0.015243769,-0.10650873,-0.031103611,-0.009446621,0.12776113,0.7204559,0.42579752,-1.0398266,-0.056343008,1.0398266,"down","IL9",3578,"0006954 // inflammatory response // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0030307 // positive regulation of cell growth // inferred from electronic annotation /// 0045407 // positive regulation of interleukin-5 biosynthetic process // inferred from sequence or structural similarity /// 0045407 // positive regulation of interleukin-5 biosynthetic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0005126 // cytokine receptor binding // inferred from electronic annotation /// 0005140 // interleukin-9 receptor binding // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation","chr5:135227934-135231516 (-) // 92.92 // q31.1"]
["11760204_x_at",0.077408075,-0.046782255,-0.1685412,0.046782494,0.09805322,-0.14258242,0.86725014,0.6705716,-1.032916,-0.046722863,1.032916,"down","CKMT1A /// CKMT1B","1159 /// 548596","0006600 // creatine metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004111 // creatine kinase activity // inferred from electronic annotation /// 0004111 // creatine kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr15:43886292-43889261 (+) // 88.82 // q15.3"]
["11741596_at",-0.06778383,0.027534485,0.08578801,0.113227844,-0.2767222,-0.027534485,0.8047329,0.5547517,1.0561801,0.07885589,1.0561801,"up","SMR3A",26952,"","0005576 // extracellular region // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement","","chr4:71226477-71232836 (+) // 99.68 // q13.3"]
["11739172_a_at",-0.03540945,-0.06566906,-0.13884354,0.14888763,0.083061695,0.035408974,0.16156353,0.019815495,-1.1243517,-0.16909343,1.1243517,"down","G2E3",55632,"0000209 // protein polyubiquitination // inferred from electronic annotation /// 0001824 // blastocyst development // inferred from electronic annotation /// 0006464 // cellular protein modification process // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:31028338-31089265 (+) // 94.36 // q12"]
["11762884_at",-0.06943464,0.06943464,0.16033792,-0.13854647,0.07085657,-0.22147083,0.5628745,0.24366505,1.1094409,0.14983284,1.1094409,"up","HSP90AB6P",541611,"0006457 // protein folding // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation","","0005524 // ATP binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr13:97536095-97537843 (-) // 87.66 // q32.1"]
["11744933_a_at",0.0899992,0.05555153,-0.004688263,0.004688263,-0.18819237,-0.07899094,0.3584448,0.09717141,1.0976762,0.13445248,1.0976762,"up","ASXL1",171023,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from sequence or structural similarity /// 0035359 // negative regulation of peroxisome proliferator activated receptor signaling pathway // inferred from sequence or structural similarity /// 0035522 // monoubiquitinated histone H2A deubiquitination // inferred from direct assay /// 0045599 // negative regulation of fat cell differentiation // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0048386 // positive regulation of retinoic acid receptor signaling pathway // inferred from sequence or structural similarity /// 0048387 // negative regulation of retinoic acid receptor signaling pathway // inferred from sequence or structural similarity","0000790 // nuclear chromatin // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0035517 // PR-DUB complex // inferred from direct assay","0003713 // transcription coactivator activity // inferred from sequence or structural similarity /// 0003714 // transcription corepressor activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0042974 // retinoic acid receptor binding // inferred from sequence or structural similarity /// 0042975 // peroxisome proliferator activated receptor binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:30946140-30960354 (+) // 72.69 // q11.21"]
["11759062_s_at",-0.12713146,-0.39008617,-0.22018051,0.14189243,0.19190216,0.12713146,0.100485206,0.0073418585,-1.3189971,-0.39944145,1.3189971,"down","SIK2",23235,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // inferred from direct assay /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0046626 // regulation of insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0046777 // protein autophosphorylation // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:111473114-111601579 (+) // 96.17 // q23.1"]
["11753035_x_at",0.0043210983,-0.074092865,0.10333681,-0.0043210983,0.26865864,-0.1394229,0.9371742,0.82701033,-1.0213306,-0.030449929,1.0213306,"down","LINC00470",56651,"","","","chr18:1269176-1276089 (-) // 48.75 // p11.32"]
["11736117_a_at",-0.013555527,-0.17127609,-0.1902647,0.07864666,0.07972622,0.013555527,0.22501759,0.038685426,-1.1347241,-0.1823416,1.1347241,"down","ZFAND5",7763,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0001944 // vasculature development // inferred from electronic annotation /// 0003016 // respiratory system process // inferred from electronic annotation /// 0010761 // fibroblast migration // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0048745 // smooth muscle tissue development // inferred from electronic annotation /// 0060324 // face development // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:74966340-74980386 (-) // 86.52 // q21.13"]
["11742943_a_at",-0.24270058,0.036047935,0.174263,-0.45005417,-0.036047935,0.11054993,0.83592564,0.61142087,1.0825154,0.11438749,1.0825154,"up","CKM",1158,"0006600 // creatine metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046314 // phosphocreatine biosynthetic process // inferred from electronic annotation","0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004111 // creatine kinase activity // inferred from electronic annotation /// 0004111 // creatine kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr19:45809670-45826235 (-) // 90.81 // q13.32"]
["11727163_a_at",0.107281685,0.004058361,0.027485847,-0.27112198,-0.2250247,-0.004058838,0.30992138,0.07302713,1.1591043,0.21301045,1.1591043,"up","ACVR2A",92,"0001934 // positive regulation of protein phosphorylation // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007178 // transmembrane receptor protein serine/threonine kinase signaling pathway // traceable author statement /// 0007178 // transmembrane receptor protein serine/threonine kinase signaling pathway // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0007498 // mesoderm development // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0009966 // regulation of signal transduction // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation /// 0030501 // positive regulation of bone mineralization // inferred from mutant phenotype /// 0030509 // BMP signaling pathway // inferred from direct assay /// 0030509 // BMP signaling pathway // inferred from mutant phenotype /// 0030509 // BMP signaling pathway // traceable author statement /// 0030509 // BMP signaling pathway // inferred from electronic annotation /// 0030510 // regulation of BMP signaling pathway // inferred from electronic annotation /// 0032924 // activin receptor signaling pathway // inferred from direct assay /// 0032924 // activin receptor signaling pathway // inferred from electronic annotation /// 0032927 // positive regulation of activin receptor signaling pathway // inferred from direct assay /// 0042713 // sperm ejaculation // inferred from electronic annotation /// 0043084 // penile erection // inferred from electronic annotation /// 0045648 // positive regulation of erythrocyte differentiation // inferred from direct assay /// 0045669 // positive regulation of osteoblast differentiation // inferred from mutant phenotype /// 0046881 // positive regulation of follicle-stimulating hormone secretion // inferred from electronic annotation /// 0048706 // embryonic skeletal system development // inferred from electronic annotation /// 0050999 // regulation of nitric-oxide synthase activity // inferred from electronic annotation /// 0060011 // Sertoli cell proliferation // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0034673 // inhibin-betaglycan-ActRII complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // not recorded /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004675 // transmembrane receptor protein serine/threonine kinase activity // traceable author statement /// 0004675 // transmembrane receptor protein serine/threonine kinase activity // inferred from electronic annotation /// 0004702 // receptor signaling protein serine/threonine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005024 // transforming growth factor beta-activated receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0015026 // coreceptor activity // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016362 // activin receptor activity, type II // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017002 // activin-activated receptor activity // inferred from direct assay /// 0017002 // activin-activated receptor activity // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from electronic annotation /// 0034711 // inhibin binding // inferred from electronic annotation /// 0043621 // protein self-association // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048185 // activin binding // inferred from physical interaction /// 0048185 // activin binding // inferred from electronic annotation","chr2:148602371-148688557 (+) // 95.8 // q22.3"]
["11756255_x_at",0.046772003,0.035093307,0.019651413,-0.019651413,-0.021853447,-0.18697166,0.39994487,0.120789096,1.0792265,0.10999767,1.0792265,"up","YWHAH",7533,"0002028 // regulation of sodium ion transport // inferred from sequence or structural similarity /// 0006713 // glucocorticoid catabolic process // inferred from direct assay /// 0006886 // intracellular protein transport // inferred from sequence or structural similarity /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0042921 // glucocorticoid receptor signaling pathway // inferred from direct assay /// 0045664 // regulation of neuron differentiation // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0048167 // regulation of synaptic plasticity // inferred from sequence or structural similarity /// 0050774 // negative regulation of dendrite morphogenesis // inferred from sequence or structural similarity /// 0050774 // negative regulation of dendrite morphogenesis // inferred from electronic annotation /// 2000649 // regulation of sodium ion transmembrane transporter activity // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0014704 // intercalated disc // inferred by curator","0003779 // actin binding // inferred from electronic annotation /// 0004497 // monooxygenase activity // inferred from electronic annotation /// 0005159 // insulin-like growth factor receptor binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0017080 // sodium channel regulator activity // inferred from sequence or structural similarity /// 0019899 // enzyme binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from sequence or structural similarity /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0035259 // glucocorticoid receptor binding // inferred from physical interaction /// 0044325 // ion channel binding // inferred from sequence or structural similarity","chr22:32340981-32353590 (+) // 98.61 // q12.3"]
["11759326_at",-0.010814905,0.010814667,0.01974988,-0.052582264,-0.07459211,0.025697231,0.5919619,0.2721383,1.0284053,0.04040896,1.0284053,"up","FAM123A",219287,"0007398 // ectoderm development // inferred from sequence or structural similarity /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from mutant phenotype","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from direct assay /// 0008289 // lipid binding // inferred from electronic annotation","chr13:25735821-25746425 (-) // 85.67 // q12.13"]
["11722245_a_at",0.066934586,0.056643486,0.062369347,-0.12652874,-0.056643486,-0.06569958,0.06465037,0.0028159635,1.1056845,0.14493981,1.1056845,"up","PTDSS2",81490,"0006659 // phosphatidylserine biosynthetic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from sequence or structural similarity /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003882 // CDP-diacylglycerol-serine O-phosphatidyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr11:450264-491399 (+) // 95.28 // p15.5"]
["11752601_x_at",-0.0436697,0.0016276836,0.07366681,-0.09484768,-0.0016274452,0.1320219,0.9951056,0.98678195,-1.0009066,-0.0013073356,1.0009066,"down","MRC1",4360,"0006897 // endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // inferred from direct assay","0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0010008 // endosome membrane // inferred from direct assay /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0005537 // mannose binding // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr10:17851360-17895134 (+) // 84.42 // p12.33"]
["11718478_s_at",-0.2502675,-0.015452385,0.015452385,-0.104169846,0.17804432,0.07777929,0.6364367,0.31868112,-1.097312,-0.13397375,1.097312,"down","STAR",6770,"0006694 // steroid biosynthetic process // traceable author statement /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006700 // C21-steroid hormone biosynthetic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0008202 // steroid metabolic process // traceable author statement /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0008211 // glucocorticoid metabolic process // inferred from electronic annotation /// 0030301 // cholesterol transport // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0050810 // regulation of steroid biosynthetic process // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // traceable author statement","0008289 // lipid binding // inferred from electronic annotation /// 0015485 // cholesterol binding // inferred from electronic annotation /// 0017127 // cholesterol transporter activity // inferred from electronic annotation","chr8:38000209-38008783 (-) // 82.05 // p11.23"]
["11731273_a_at",-0.007873535,0.007873535,-0.011277199,-0.14688158,0.33415794,0.19810915,0.7084984,0.40834582,-1.0959796,-0.13222091,1.0959796,"down","KCNE1",3753,"0002070 // epithelial cell maturation // inferred from electronic annotation /// 0006487 // protein N-linked glycosylation // inferred from direct assay /// 0006493 // protein O-linked glycosylation // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0007605 // sensory perception of sound // traceable author statement /// 0008015 // blood circulation // non-traceable author statement /// 0008016 // regulation of heart contraction // inferred by curator /// 0008016 // regulation of heart contraction // traceable author statement /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0051899 // membrane depolarization // inferred from direct assay /// 0071435 // potassium ion export // inferred from direct assay /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation","0005764 // lysosome // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0008076 // voltage-gated potassium channel complex // inferred by curator /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005249 // voltage-gated potassium channel activity // inferred from electronic annotation /// 0005251 // delayed rectifier potassium channel activity // inferred from direct assay /// 0005251 // delayed rectifier potassium channel activity // inferred from electronic annotation /// 0005251 // delayed rectifier potassium channel activity // traceable author statement /// 0005267 // potassium channel activity // inferred from electronic annotation /// 0015459 // potassium channel regulator activity // inferred from direct assay /// 0015459 // potassium channel regulator activity // traceable author statement","chr21:35818987-35883616 (-) // 64.08 // q22.12"]
["11731054_s_at",-0.08482075,0.084821224,0.09309769,0.097959995,-0.17512846,-0.31617546,0.6150354,0.29497296,1.1189514,0.16214743,1.1189514,"up","FNIP1",96459,"0001932 // regulation of protein phosphorylation // inferred from direct assay /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr5:130977406-131132799 (-) // 93.89 // q31.1"]
["11730665_a_at",0.43448353,0.24416399,0.17965317,-0.17965317,-0.31997442,-0.46047497,0.087915696,0.005549573,1.5221752,0.6061344,1.5221752,"up","FOXP1",27086,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0002053 // positive regulation of mesenchymal cell proliferation // not recorded /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0002329 // pre-B cell differentiation // not recorded /// 0002329 // pre-B cell differentiation // inferred from electronic annotation /// 0002639 // positive regulation of immunoglobulin production // not recorded /// 0002639 // positive regulation of immunoglobulin production // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007389 // pattern specification process // not recorded /// 0007507 // heart development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // not recorded /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from electronic annotation /// 0009790 // embryo development // not recorded /// 0009790 // embryo development // inferred from electronic annotation /// 0021517 // ventral spinal cord development // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0033152 // immunoglobulin V(D)J recombination // not recorded /// 0033152 // immunoglobulin V(D)J recombination // inferred from electronic annotation /// 0045214 // sarcomere organization // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048745 // smooth muscle tissue development // not recorded /// 0048745 // smooth muscle tissue development // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // not recorded /// 0055007 // cardiac muscle cell differentiation // not recorded /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0060043 // regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0060501 // positive regulation of epithelial cell proliferation involved in lung morphogenesis // not recorded /// 0072358 // cardiovascular system development // inferred from electronic annotation /// 2000727 // positive regulation of cardiac muscle cell differentiation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // not recorded /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // not recorded","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // not recorded /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // not recorded /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008134 // transcription factor binding // not recorded /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008301 // DNA binding, bending // not recorded /// 0042803 // protein homodimerization activity // not recorded /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // not recorded /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr3:71247036-71630849 (-) // 82.82 // p13"]
["11743868_s_at",-0.36664772,0.025170326,0.039140224,-0.27162266,-0.025170326,0.16511106,0.91420305,0.77203315,-1.0402174,-0.056885075,1.0402174,"down","NGDN",25983,"0006417 // regulation of translation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","","chr14:23938896-23948013 (+) // 99.05 // q11.2"]
["11726988_s_at",-0.086372375,-0.0008420944,0.00084114075,0.0014019012,0.072063446,-0.010177612,0.5857438,0.26578966,-1.0351839,-0.049887095,1.0351839,"down","EIF2AK1",27102,"0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006950 // response to stress // inferred from expression pattern /// 0006950 // response to stress // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009605 // response to external stimulus // inferred from expression pattern /// 0010467 // gene expression // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031398 // positive regulation of protein ubiquitination // inferred from electronic annotation /// 0045993 // negative regulation of translational initiation by iron // non-traceable author statement /// 0046777 // protein autophosphorylation // inferred from sequence or structural similarity /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0046986 // negative regulation of hemoglobin biosynthetic process // inferred from sequence or structural similarity /// 0046986 // negative regulation of hemoglobin biosynthetic process // inferred from electronic annotation /// 0060510 // Type II pneumocyte differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004694 // eukaryotic translation initiation factor 2alpha kinase activity // inferred from direct assay /// 0004694 // eukaryotic translation initiation factor 2alpha kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0020037 // heme binding // inferred from sequence or structural similarity /// 0020037 // heme binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr7:6061879-6098860 (-) // 92.26 // p22.1"]
["11724953_a_at",-0.07338333,-0.09128761,0.10023022,0.07338333,0.108748436,-0.12737608,0.8809309,0.6989758,-1.027923,-0.03973218,1.027923,"down","PDIK1L",149420,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr1:26438267-26452034 (+) // 95.35 // p36.11"]
["11726450_a_at",-0.15267372,0.009196758,-0.144351,-0.009196758,0.08023977,0.08295059,0.30833665,0.072307914,-1.1074748,-0.14727387,1.1074748,"down","B3GAT1",27087,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0008499 // UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity // inferred from electronic annotation /// 0015018 // galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:134248397-134281812 (-) // 96.16 // q25"]
["11742045_a_at",-0.07066488,0.20407772,-0.28563452,-0.15464735,0.07066488,0.2041049,0.8485669,0.63355196,-1.0649468,-0.09078132,1.0649468,"down","PAK6",56924,"0000075 // cell cycle checkpoint // traceable author statement /// 0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007010 // cytoskeleton organization // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007049 // cell cycle // non-traceable author statement /// 0007051 // spindle organization // non-traceable author statement /// 0007067 // mitosis // inferred from electronic annotation /// 0007067 // mitosis // non-traceable author statement /// 0007067 // mitosis // traceable author statement /// 0007091 // mitotic metaphase/anaphase transition // inferred from electronic annotation /// 0007093 // mitotic cell cycle checkpoint // traceable author statement /// 0007094 // mitotic cell cycle spindle assembly checkpoint // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034501 // protein localization to kinetochore // inferred from physical interaction /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000776 // kinetochore // inferred from electronic annotation /// 0000776 // kinetochore // non-traceable author statement /// 0000776 // kinetochore // traceable author statement /// 0000777 // condensed chromosome kinetochore // inferred from direct assay /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0000940 // condensed chromosome outer kinetochore // inferred from direct assay /// 0000940 // condensed chromosome outer kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005680 // anaphase-promoting complex // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0051233 // spindle midzone // non-traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004672 // protein kinase activity // non-traceable author statement /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr15:40509628-40569687 (+) // 97.38 // q15.1"]
["11723298_s_at",0.25175095,-0.043008804,0.010883331,0.011008263,-0.010883331,-0.14489365,0.6229598,0.30318764,1.0878388,0.121464744,1.0878388,"up","AKAP2 /// PALM2-AKAP2","11217 /// 445815","0008360 // regulation of cell shape // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0016301 // kinase activity // inferred from electronic annotation /// 0019899 // enzyme binding // non-traceable author statement","chr9:112542576-112934792 (+) // 95.72 // q31.3"]
["11749950_a_at",0.20028973,-0.06023407,-0.09182072,0.24274635,0.06023407,-0.11818886,0.90955156,0.76033765,-1.0320543,-0.045518886,1.0320543,"down","C3orf17",25871,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:112724022-112738511 (-) // 99.84 // q13.2"]
["11725879_a_at",0.28700972,0.010538101,-0.010538101,0.05696869,-0.15836954,-0.25504827,0.48854962,0.18215598,1.1602907,0.21448633,1.1602907,"up","UBR2",23304,"0006342 // chromatin silencing // inferred from sequence or structural similarity /// 0006342 // chromatin silencing // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0007141 // male meiosis I // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030163 // protein catabolic process // inferred from electronic annotation /// 0032007 // negative regulation of TOR signaling cascade // inferred from mutant phenotype /// 0033522 // histone H2A ubiquitination // inferred from sequence or structural similarity /// 0033522 // histone H2A ubiquitination // inferred from electronic annotation /// 0071233 // cellular response to leucine // inferred from direct assay","0000151 // ubiquitin ligase complex // inferred from electronic annotation /// 0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070728 // leucine binding // inferred from direct assay","chr6:42532057-42661242 (+) // 99.47 // p21.1"]
["11727312_at",-0.010858774,0.010858774,0.04364276,-0.091208935,-0.10216522,0.0658977,0.67985004,0.37020752,1.040329,0.05703982,1.040329,"up","BHLHE22",27319,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0060040 // retinal bipolar neuron differentiation // inferred from electronic annotation /// 0060042 // retina morphogenesis in camera-type eye // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","","chr8:65492521-65496186 (+) // 90.06 // q12.3"]
["11721077_a_at",0.11744976,-0.16733742,-0.16977501,0.22443771,0.0018253326,-0.0018253326,0.60889584,0.28896895,-1.1080581,-0.14803351,1.1080581,"down","ESD",2098,"","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016023 // cytoplasmic membrane-bounded vesicle // non-traceable author statement /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0004091 // carboxylesterase activity // non-traceable author statement /// 0004091 // carboxylesterase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation /// 0018738 // S-formylglutathione hydrolase activity // inferred from electronic annotation /// 0047374 // methylumbelliferyl-acetate deacetylase activity // inferred from electronic annotation","chr13:47345394-47371367 (-) // 95.65 // q14.2"]
["11735547_at",-0.13797975,0,-0.26903725,0.029630184,0,0.2958436,0.39211687,0.1159164,-1.1844059,-0.2441636,1.1844059,"down","SLC36A2",153201,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006865 // amino acid transport // traceable author statement /// 0006865 // amino acid transport // inferred from electronic annotation /// 0015808 // L-alanine transport // inferred from electronic annotation /// 0015816 // glycine transport // inferred from mutant phenotype /// 0015816 // glycine transport // inferred from electronic annotation /// 0015824 // proline transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0035524 // proline transmembrane transport // inferred from mutant phenotype /// 0035524 // proline transmembrane transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005280 // hydrogen:amino acid symporter activity // inferred from electronic annotation /// 0015180 // L-alanine transmembrane transporter activity // inferred from electronic annotation /// 0015187 // glycine transmembrane transporter activity // inferred from mutant phenotype /// 0015187 // glycine transmembrane transporter activity // inferred from electronic annotation /// 0015193 // L-proline transmembrane transporter activity // inferred from electronic annotation","chr5:150694891-150727151 (-) // 66.15 // q33.1"]
["11751546_at",-0.14021778,0.11729717,0.09602833,-0.29508018,-0.09602833,0.3662529,0.95963824,0.88534415,1.0228925,0.032654498,1.0228925,"up","LOC729658",729658,"","","","chr6:163586445-163612840 (-) // 99.91 // q26"]
["11734139_a_at",-0.09367943,0.09367943,-0.3051901,-0.10093784,0.23405743,0.16632557,0.58076066,0.2608867,-1.1499293,-0.20154515,1.1499293,"down","TBC1D10C",374403,"0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation","chr11:67171411-67177559 (+) // 95.24 // q13.2"]
["11725591_a_at",-0.11487436,-0.050854683,-0.025094986,0.08526516,0.025094986,0.19545937,0.237865,0.042974133,-1.1215919,-0.16554786,1.1215919,"down","SPATA2",9825,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // non-traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay","","chr20:48314112-48530276 (-) // 94.5 // q13.13"]
["11755302_a_at",-0.123535156,-0.041222572,-0.105386734,0.041222572,0.10759926,0.17774963,0.13138874,0.013023596,-1.147827,-0.19890524,1.147827,"down","COL24A1",255631,"","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation","0005201 // extracellular matrix structural constituent // inferred from electronic annotation","chr1:86196187-86622118 (-) // 99.46 // p22.3"]
["11762645_x_at",0.230474,-0.05167675,-0.007201433,-0.15707016,0.2549386,0.0072011948,0.96073025,0.88841534,1.0154896,0.022175433,1.0154896,"up","","","","","","chr1:52834191-52835939 (+) // 50.23 // p32.3"]
["11757572_a_at",0.049235344,-0.08629227,-0.073581696,0.19714355,0.09644985,-0.049235344,0.54697394,0.2296748,-1.0854793,-0.118332155,1.0854793,"down","UBAC2",337867,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr13:100038242-100038682 (+) // 90.35 // q32.3"]
["11756981_s_at",-0.013950348,0.013950348,-0.05499935,-0.30127144,0.06981373,0.17691326,0.99964154,0.99922246,-1.0001051,-0.00015168072,1.0001051,"down","HDAC7",51564,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007043 // cell-cell junction assembly // inferred from electronic annotation /// 0007219 // Notch signaling pathway // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016575 // histone deacetylation // inferred from electronic annotation /// 0032703 // negative regulation of interleukin-2 production // inferred from direct assay /// 0045668 // negative regulation of osteoblast differentiation // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0090050 // positive regulation of cell migration involved in sprouting angiogenesis // inferred from mutant phenotype","0000118 // histone deacetylase complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003682 // chromatin binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0004407 // histone deacetylase activity // inferred from electronic annotation /// 0005080 // protein kinase C binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0031078 // histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0032041 // NAD-dependent histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0032129 // histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0033613 // activating transcription factor binding // inferred from physical interaction /// 0034739 // histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation /// 0046969 // NAD-dependent histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0046970 // NAD-dependent histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation /// 0070491 // repressing transcription factor binding // inferred from physical interaction /// 0071889 // 14-3-3 protein binding // inferred from direct assay","chr12:48177317-48185750 (-) // 100.0 // q13.11"]
["11735838_a_at",-0.06431675,0.06431627,0.17586517,-0.11340189,-0.07467985,0.28361654,0.95031905,0.8617034,1.0187335,0.026776694,1.0187335,"up","MADCAM1",8174,"0002687 // positive regulation of leukocyte migration // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from electronic annotation /// 0050776 // regulation of immune response // traceable author statement /// 0050900 // leukocyte migration // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr19:496453-505342 (+) // 72.07 // p13.3"]
["11739032_x_at",-0.078103065,-0.14835262,-0.07565594,0.20583534,0.29567432,0.07565594,0.1295079,0.012652036,-1.2252638,-0.29309243,1.2252638,"down","ACTR2",10097,"0006928 // cellular component movement // traceable author statement /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0008356 // asymmetric cell division // inferred from electronic annotation /// 0016482 // cytoplasmic transport // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0033206 // cytokinesis after meiosis // inferred from electronic annotation /// 0051321 // meiotic cell cycle // inferred from electronic annotation /// 0051653 // spindle localization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005885 // Arp2/3 protein complex // inferred from reviewed computational analysis /// 0005885 // Arp2/3 protein complex // traceable author statement /// 0005938 // cell cortex // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0030478 // actin cap // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation","chr2:65454828-65498385 (+) // 98.65 // p14"]
["11715226_s_at",-0.05919075,-0.030258656,0.030258656,-0.0740242,0.15427113,0.30376053,0.5808158,0.26103586,-1.1078271,-0.14773269,1.1078271,"down","PCDHA6",56142,"0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr5:140207649-140210088 (+) // 100.0 // q31.3"]
["11732650_a_at",-0.004965782,0.004966259,0.012277603,-0.17281437,0.025919914,-0.014124393,0.69965863,0.39648032,1.0408525,0.0577657,1.0408525,"up","HEXDC",284004,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds // inferred from electronic annotation /// 0004563 // beta-N-acetylhexosaminidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0043169 // cation binding // inferred from electronic annotation","chr17:80376193-80400515 (+) // 87.06 // q25.3"]
["11725040_at",0.012978077,-0.09319401,-0.012978077,0.24659586,0.16967392,-0.06918526,0.5325568,0.21723188,-1.10708,-0.14675945,1.10708,"down","FGF2",2247,"0000186 // activation of MAPKK activity // inferred from electronic annotation /// 0000187 // activation of MAPK activity // traceable author statement /// 0000189 // MAPK import into nucleus // inferred from electronic annotation /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001658 // branching involved in ureteric bud morphogenesis // inferred from direct assay /// 0001759 // organ induction // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001938 // positive regulation of endothelial cell proliferation // inferred from electronic annotation /// 0002042 // cell migration involved in sprouting angiogenesis // inferred from direct assay /// 0002042 // cell migration involved in sprouting angiogenesis // inferred from genetic interaction /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006661 // phosphatidylinositol biosynthetic process // inferred from direct assay /// 0006700 // C21-steroid hormone biosynthetic process // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006935 // chemotaxis // traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from genetic interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from physical interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0009887 // organ morphogenesis // traceable author statement /// 0010001 // glial cell differentiation // inferred from electronic annotation /// 0010595 // positive regulation of endothelial cell migration // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010764 // negative regulation of fibroblast migration // inferred from direct assay /// 0010863 // positive regulation of phospholipase C activity // inferred from direct assay /// 0017158 // regulation of calcium ion-dependent exocytosis // inferred from electronic annotation /// 0021762 // substantia nigra development // inferred from electronic annotation /// 0021940 // positive regulation of cerebellar granule cell precursor proliferation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030214 // hyaluronan catabolic process // inferred from direct assay /// 0030308 // negative regulation of cell growth // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0032958 // inositol phosphate biosynthetic process // inferred from direct assay /// 0042060 // wound healing // traceable author statement /// 0042060 // wound healing // inferred from electronic annotation /// 0042660 // positive regulation of cell fate specification // inferred from direct assay /// 0043536 // positive regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0043537 // negative regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from direct assay /// 0045597 // positive regulation of cell differentiation // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // inferred from electronic annotation /// 0045765 // regulation of angiogenesis // traceable author statement /// 0045766 // positive regulation of angiogenesis // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046668 // regulation of retinal cell programmed cell death // inferred from electronic annotation /// 0048598 // embryonic morphogenesis // traceable author statement /// 0048678 // response to axon injury // inferred from electronic annotation /// 0048864 // stem cell development // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050918 // positive chemotaxis // inferred from direct assay /// 0051209 // release of sequestered calcium ion into cytosol // inferred from direct assay /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from electronic annotation /// 0060045 // positive regulation of cardiac muscle cell proliferation // inferred from direct assay /// 0060128 // corticotropin hormone secreting cell differentiation // inferred from electronic annotation /// 0060129 // thyroid-stimulating hormone-secreting cell differentiation // inferred from electronic annotation /// 0060548 // negative regulation of cell death // inferred from direct assay /// 0060591 // chondroblast differentiation // inferred from direct assay /// 0060644 // mammary gland epithelial cell differentiation // inferred from electronic annotation /// 0061045 // negative regulation of wound healing // inferred from direct assay /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","0005104 // fibroblast growth factor receptor binding // inferred from physical interaction /// 0005104 // fibroblast growth factor receptor binding // inferred from electronic annotation /// 0005125 // cytokine activity // inferred from direct assay /// 0005245 // voltage-gated calcium channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from direct assay /// 0008083 // growth factor activity // inferred from electronic annotation /// 0008083 // growth factor activity // traceable author statement /// 0008201 // heparin binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017134 // fibroblast growth factor binding // inferred from electronic annotation /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from direct assay /// 0042056 // chemoattractant activity // inferred from direct assay","chr4:123747862-123819379 (+) // 88.23 // q27"]
["11726258_at",-0.21557188,-0.21847868,-0.2694502,0.7274828,0.41316938,0.2155714,0.117489845,0.0102227805,-1.6094579,-0.68657476,1.6094579,"down","RNF141",50862,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","","0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:10533221-10562778 (-) // 89.14 // p15.4"]
["11718128_x_at",0.17268658,0.16120338,0.13056374,-0.18053341,-0.13056374,-0.14239788,0.01829885,9.89127e-5,1.2362607,0.30598295,1.2362607,"up","TK1",7083,"0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0006206 // pyrimidine base metabolic process // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0009165 // nucleotide biosynthetic process // not recorded /// 0016310 // phosphorylation // inferred from electronic annotation /// 0043097 // pyrimidine nucleoside salvage // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051289 // protein homotetramerization // inferred from physical interaction /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004797 // thymidine kinase activity // inferred from electronic annotation /// 0004797 // thymidine kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0019206 // nucleoside kinase activity // not recorded /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:76169995-76183314 (-) // 90.46 // q25.3"]
["11717603_a_at",0.11781788,-0.17626905,-0.19084978,0.14877367,0.06201458,-0.06201458,0.6400006,0.32259813,-1.0963372,-0.13269159,1.0963372,"down","SECISBP2",79048,"0006412 // translation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay","0003723 // RNA binding // inferred from electronic annotation /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0003730 // mRNA 3'-UTR binding // inferred from electronic annotation","chr9:91933387-91974557 (+) // 91.58 // q22.2"]
["11756653_x_at",0.04967761,0.2895031,0.017852306,-0.13431358,-0.017852306,-0.1592927,0.32776216,0.081424624,1.167021,0.22283056,1.167021,"up","FGF1",2246,"0001525 // angiogenesis // inferred from electronic annotation /// 0001759 // organ induction // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from genetic interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from physical interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0010740 // positive regulation of intracellular protein kinase cascade // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0034605 // cellular response to heat // inferred from direct assay /// 0045542 // positive regulation of cholesterol biosynthetic process // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from direct assay /// 0045785 // positive regulation of cell adhesion // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0051781 // positive regulation of cell division // inferred from direct assay /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0060681 // branch elongation involved in ureteric bud branching // inferred from direct assay /// 0072163 // mesonephric epithelium development // inferred from direct assay","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005938 // cell cortex // inferred from electronic annotation","0005104 // fibroblast growth factor receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from direct assay /// 0008083 // growth factor activity // inferred from electronic annotation /// 0008083 // growth factor activity // traceable author statement /// 0008201 // heparin binding // inferred from direct assay /// 0008201 // heparin binding // inferred from electronic annotation /// 0044548 // S100 protein binding // inferred from physical interaction","chr5:141974795-142077635 (-) // 99.9 // q31.3"]
["11755393_a_at",-0.017651081,-0.17163181,-0.14953995,0.036217213,0.017651081,0.1135478,0.22958189,0.04011118,-1.1240813,-0.16874632,1.1240813,"down","HHLA2",11148,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:108015341-108097127 (+) // 84.67 // q13.13"]
["11723231_s_at",-0.021603107,-0.15398121,0.021603107,0.035167217,0.16036701,-0.13992167,0.7904509,0.5304371,-1.0496181,-0.069864534,1.0496181,"down","RNF138 /// RNF138P1","379013 /// 51444","0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr18:29671843-29711523 (+) // 95.8 // q12.1"]
["11755407_s_at",-0.052644968,-0.19492912,-0.054439783,0.052645206,0.070218086,0.08160019,0.1795809,0.024314951,-1.1241431,-0.16882573,1.1241431,"down","OR7A5",26659,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // non-traceable author statement /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // non-traceable author statement /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // non-traceable author statement /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr19:14938093-14945960 (-) // 99.71 // p13.12"]
["11739781_a_at",-0.010902405,0.15225172,0.010902405,-0.01883316,-0.040364742,0.23863411,0.97696453,0.9342454,-1.0063007,-0.009061454,1.0063007,"down","TGM2",7052,"0001974 // blood vessel remodeling // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0007200 // phospholipase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0018149 // peptide cross-linking // inferred from electronic annotation /// 0018153 // isopeptide cross-linking via N6-(L-isoglutamyl)-L-lysine // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0043277 // apoptotic cell clearance // inferred from direct assay /// 0045785 // positive regulation of cell adhesion // inferred from sequence or structural similarity /// 0045785 // positive regulation of cell adhesion // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0051482 // elevation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway // inferred from electronic annotation /// 0060445 // branching involved in salivary gland morphogenesis // inferred from electronic annotation /// 0060662 // salivary gland cavitation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation","0003810 // protein-glutamine gamma-glutamyltransferase activity // inferred from sequence or structural similarity /// 0003810 // protein-glutamine gamma-glutamyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:36766350-36793674 (-) // 89.72 // q11.23"]
["11718884_s_at",-0.07024288,0.018543243,0.0700264,-0.0010986328,0.0010986328,-0.049690247,0.84932077,0.63496447,1.0158395,0.022672417,1.0158395,"up","ARL5A",26225,"0007264 // small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr2:152657492-152685043 (-) // 96.21 // q23.3"]
["11759009_at",-0.4232335,0.0662837,0.087605715,-0.17489862,-0.066283464,0.19185472,0.89586234,0.7313559,-1.0521489,-0.07333894,1.0521489,"down","CA1",759,"0006730 // one-carbon metabolic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay","0004089 // carbonate dehydratase activity // inferred from electronic annotation /// 0004089 // carbonate dehydratase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:86239836-86291243 (-) // 68.09 // q21.2"]
["11717127_a_at",0.17144632,-0.17864561,-0.22575426,0.5329814,0.04389572,-0.0438962,0.6273074,0.30821183,-1.1935934,-0.25531143,1.1935934,"down","ANPEP",290,"0001525 // angiogenesis // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006725 // cellular aromatic compound metabolic process // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0035814 // negative regulation of renal sodium excretion // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0012506 // vesicle membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031983 // vesicle lumen // inferred from electronic annotation","0004177 // aminopeptidase activity // inferred from electronic annotation /// 0004177 // aminopeptidase activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:90328125-90350040 (-) // 91.97 // q26.1"]
["11716630_a_at",0.027504444,-0.0059137344,-0.017323017,0.0059137344,-0.08742905,0.08286095,0.99468,0.9856881,1.0006753,0.0009739529,1.0006753,"up","ANGPTL4",51129,"0001525 // angiogenesis // inferred from electronic annotation /// 0001666 // response to hypoxia // non-traceable author statement /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from sequence or structural similarity /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045766 // positive regulation of angiogenesis // traceable author statement /// 0051005 // negative regulation of lipoprotein lipase activity // inferred from direct assay /// 0051005 // negative regulation of lipoprotein lipase activity // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0070328 // triglyceride homeostasis // inferred from sequence or structural similarity /// 0070328 // triglyceride homeostasis // inferred from electronic annotation","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation","0004857 // enzyme inhibitor activity // inferred from sequence or structural similarity /// 0004857 // enzyme inhibitor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr19:8428547-8439254 (+) // 70.68 // p13.2"]
["11725285_a_at",-0.010975838,0.012497425,-0.013982773,-0.03860569,0.010976315,0.24187994,0.72607166,0.4332323,-1.0537777,-0.075570546,1.0537777,"down","ANKS6",203286,"","0005737 // cytoplasm // inferred from electronic annotation","0042803 // protein homodimerization activity // inferred from electronic annotation","chr9:101494290-101558824 (-) // 80.41 // q22.33"]
["11732495_at",0,-0.044333935,-0.04151106,0.08996487,0.09122801,0,0.27223787,0.05622777,-1.063642,-0.08901268,1.063642,"down","C1orf135",79000,"","","","chr1:26160499-26185950 (-) // 84.85 // p36.11"]
["11749552_a_at",0.03801489,0.043026447,0.17004919,-0.2014091,-0.03801489,-0.2634673,0.21367058,0.034689646,1.1903017,0.25132725,1.1903017,"up","LAMP3",27074,"0008283 // cell proliferation // traceable author statement","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005765 // lysosomal membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:182841533-182879803 (-) // 95.26 // q27.1"]
["11752386_a_at",-0.05017519,0.2498846,0.13973665,0.05017519,-0.051941395,-0.22284937,0.49573213,0.18753485,1.1391996,0.18802056,1.1391996,"up","NAB1",4664,"0001958 // endochondral ossification // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0014037 // Schwann cell differentiation // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation /// 0045682 // regulation of epidermis development // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // non-traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0008134 // transcription factor binding // inferred from electronic annotation","chr2:191513995-191555645 (+) // 99.95 // q32.2"]
["11755229_x_at",0.292706,-0.13635063,-0.0871129,0.2682538,0.08711338,-0.14274025,0.92697793,0.80407524,-1.0336837,-0.04779474,1.0336837,"down","ENGASE",64772,"0008152 // metabolic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0033925 // mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity // inferred from electronic annotation","chr17:77073509-77084679 (+) // 93.17 // q25.3"]
["11727761_at",0.0028853416,0.15388727,-0.17519808,-0.015202522,0.08793926,-0.0028848648,0.91860336,0.7842672,-1.0206058,-0.02942575,1.0206058,"down","PALM3",342979,"0001960 // negative regulation of cytokine-mediated signaling pathway // inferred from direct assay /// 0008063 // Toll signaling pathway // inferred from mutant phenotype /// 0032496 // response to lipopolysaccharide // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation","chr19:14164178-14168401 (-) // 92.39 // p13.12"]
["11718772_at",0.18175411,-0.08072376,-0.06430054,0.48881054,0.04360485,-0.04360485,0.74608725,0.46202913,-1.110103,-0.15069355,1.110103,"down","SMARCE1",6605,"0006337 // nucleosome disassembly // inferred from direct assay /// 0006337 // nucleosome disassembly // traceable author statement /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006357 // regulation of transcription from RNA polymerase II promoter // non-traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0000228 // nuclear chromosome // traceable author statement /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016514 // SWI/SNF complex // inferred from direct assay /// 0016514 // SWI/SNF complex // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from physical interaction /// 0071564 // npBAF complex // inferred from sequence or structural similarity /// 0071564 // npBAF complex // inferred from electronic annotation /// 0071565 // nBAF complex // inferred from sequence or structural similarity /// 0071565 // nBAF complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // traceable author statement /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0003713 // transcription coactivator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008080 // N-acetyltransferase activity // inferred from direct assay /// 0016922 // ligand-dependent nuclear receptor binding // inferred from physical interaction /// 0047485 // protein N-terminus binding // inferred from physical interaction","chr17:38783533-38804844 (-) // 98.28 // q21.2"]
["11760024_x_at",-0.32828283,-0.168612,0.036612034,-0.036612034,0.2333808,0.16726828,0.37852687,0.10819361,-1.2098039,-0.27477327,1.2098039,"down","VPS29",51699,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004647 // phosphoserine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:110938573-110939944 (-) // 62.31 // q24.11"]
["11724687_a_at",-0.121810436,0.01403141,-0.01403141,-0.21916676,0.30774546,0.12112975,0.7881785,0.52705026,-1.079607,-0.11050625,1.079607,"down","PCSK5",5125,"0001822 // kidney development // inferred from mutant phenotype /// 0001822 // kidney development // inferred from sequence or structural similarity /// 0002001 // renin secretion into blood stream // inferred from expression pattern /// 0006465 // signal peptide processing // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0007507 // heart development // inferred from sequence or structural similarity /// 0007565 // female pregnancy // inferred from electronic annotation /// 0007566 // embryo implantation // inferred from sequence or structural similarity /// 0009952 // anterior/posterior pattern specification // inferred from mutant phenotype /// 0016485 // protein processing // inferred from direct assay /// 0016486 // peptide hormone processing // inferred from direct assay /// 0019067 // viral assembly, maturation, egress, and release // inferred from expression pattern /// 0019067 // viral assembly, maturation, egress, and release // inferred from sequence or structural similarity /// 0030323 // respiratory tube development // inferred from sequence or structural similarity /// 0032455 // nerve growth factor processing // traceable author statement /// 0035108 // limb morphogenesis // inferred from sequence or structural similarity /// 0042089 // cytokine biosynthetic process // inferred from sequence or structural similarity /// 0043043 // peptide biosynthetic process // inferred from direct assay /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048566 // embryonic digestive tract development // inferred from mutant phenotype /// 0048566 // embryonic digestive tract development // inferred from sequence or structural similarity /// 0048706 // embryonic skeletal system development // inferred from mutant phenotype /// 0048706 // embryonic skeletal system development // inferred from sequence or structural similarity","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // not recorded /// 0005615 // extracellular space // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005796 // Golgi lumen // traceable author statement /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030141 // secretory granule // inferred from sequence or structural similarity","0004252 // serine-type endopeptidase activity // inferred from direct assay /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042277 // peptide binding // inferred from sequence or structural similarity","chr9:78505516-78810805 (+) // 97.23 // q21.13"]
["11737042_s_at",0.05333662,-0.073292255,-0.10464859,0.25449944,0.23895359,-0.053336143,0.46682367,0.16562577,-1.1393732,-0.18824035,1.1393732,"down","PHLDB2",90102,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0004629 // phospholipase C activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008081 // phosphoric diester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr3:111578567-111695362 (+) // 99.26 // q13.2"]
["11747364_x_at",-0.092098236,0.17241764,0.12171745,-0.29027653,-0.17611122,0.092098236,0.558894,0.24004324,1.1424323,0.1921087,1.1424323,"up","CYBASC3",220002,"0006810 // transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:61117597-61124643 (-) // 85.21 // q12.2"]
["11753348_a_at",-0.057919502,-0.24589825,-0.075487375,0.057919264,0.14661431,0.08539963,0.18901107,0.027038205,-1.1672224,-0.22307944,1.1672224,"down","SAMSN1",64092,"0002820 // negative regulation of adaptive immune response // inferred from sequence or structural similarity /// 0002820 // negative regulation of adaptive immune response // inferred from electronic annotation /// 0050732 // negative regulation of peptidyl-tyrosine phosphorylation // inferred from sequence or structural similarity /// 0050732 // negative regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050869 // negative regulation of B cell activation // inferred from sequence or structural similarity /// 0050869 // negative regulation of B cell activation // inferred from electronic annotation","0001726 // ruffle // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0001784 // phosphotyrosine binding // inferred from direct assay","chr21:15857954-15918662 (-) // 96.93 // q11.2"]
["11754010_x_at",0.42739582,0.0025892258,-0.06780338,0.49314594,-0.0025892258,-0.13313866,0.99804884,0.9951509,1.0011013,0.0015879015,1.0011013,"up","GOLGA2",2801,"","0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr9:131019159-131038318 (-) // 92.44 // q34.11"]
["11727247_x_at",0.29628086,0.073839664,-0.1653881,0.19951725,-0.073839664,-0.20699406,0.84253776,0.62271005,1.0683243,0.09534969,1.0683243,"up","CHRNB1",1140,"0001941 // postsynaptic membrane organization // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from mutant phenotype /// 0006936 // muscle contraction // inferred from mutant phenotype /// 0007165 // signal transduction // inferred from mutant phenotype /// 0007271 // synaptic transmission, cholinergic // inferred from mutant phenotype /// 0007274 // neuromuscular synaptic transmission // inferred from mutant phenotype /// 0035095 // behavioral response to nicotine // inferred from mutant phenotype /// 0042391 // regulation of membrane potential // inferred from sequence or structural similarity /// 0048747 // muscle fiber development // inferred from mutant phenotype /// 0050877 // neurological system process // inferred from mutant phenotype","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0005892 // acetylcholine-gated channel complex // inferred from mutant phenotype /// 0005892 // acetylcholine-gated channel complex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from mutant phenotype /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004889 // acetylcholine-activated cation-selective channel activity // inferred from sequence or structural similarity /// 0004889 // acetylcholine-activated cation-selective channel activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0015267 // channel activity // inferred from mutant phenotype /// 0015276 // ligand-gated ion channel activity // inferred from sequence or structural similarity /// 0015276 // ligand-gated ion channel activity // inferred from electronic annotation /// 0015464 // acetylcholine receptor activity // inferred from mutant phenotype /// 0042166 // acetylcholine binding // inferred from sequence or structural similarity /// 0042166 // acetylcholine binding // inferred from electronic annotation","chr17:7348379-7361028 (+) // 77.12 // p13.1"]
["11717887_s_at",-0.031115532,-0.0013628006,0.101864815,-0.009049416,0.055041313,0.0013628006,0.95732254,0.8780643,1.0051033,0.007343854,1.0051033,"up","PTPN12",5782,"0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0002102 // podosome // inferred from electronic annotation /// 0005625 // soluble fraction // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004726 // non-membrane spanning protein tyrosine phosphatase activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from physical interaction","chr7:77166693-77269386 (+) // 94.7 // q11.23"]
["11746635_a_at",0.30823183,-0.022073746,-0.17833757,0.022073746,-0.19092512,0.1760273,0.9495507,0.8601259,1.0235263,0.033548187,1.0235263,"up","LEF1",51176,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001569 // patterning of blood vessels // not recorded /// 0001569 // patterning of blood vessels // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from expression pattern /// 0001755 // neural crest cell migration // not recorded /// 0001756 // somitogenesis // not recorded /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001837 // epithelial to mesenchymal transition // inferred from sequence or structural similarity /// 0001837 // epithelial to mesenchymal transition // inferred from electronic annotation /// 0001944 // vasculature development // inferred from electronic annotation /// 0002040 // sprouting angiogenesis // not recorded /// 0002040 // sprouting angiogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006917 // induction of apoptosis // not recorded /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007420 // brain development // not recorded /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0010226 // response to lithium ion // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from mutant phenotype /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from direct assay /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016202 // regulation of striated muscle tissue development // not recorded /// 0021542 // dentate gyrus development // not recorded /// 0021542 // dentate gyrus development // inferred from electronic annotation /// 0021766 // hippocampus development // inferred from electronic annotation /// 0021854 // hypothalamus development // not recorded /// 0021861 // forebrain radial glial cell differentiation // not recorded /// 0021861 // forebrain radial glial cell differentiation // inferred from electronic annotation /// 0021873 // forebrain neuroblast division // not recorded /// 0021873 // forebrain neuroblast division // inferred from electronic annotation /// 0021879 // forebrain neuron differentiation // not recorded /// 0021943 // formation of radial glial scaffolds // not recorded /// 0021943 // formation of radial glial scaffolds // inferred from electronic annotation /// 0022008 // neurogenesis // not recorded /// 0022407 // regulation of cell-cell adhesion // inferred from electronic annotation /// 0022408 // negative regulation of cell-cell adhesion // inferred from direct assay /// 0022409 // positive regulation of cell-cell adhesion // inferred from direct assay /// 0030111 // regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030223 // neutrophil differentiation // inferred from mutant phenotype /// 0030307 // positive regulation of cell growth // inferred from mutant phenotype /// 0030326 // embryonic limb morphogenesis // not recorded /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0030509 // BMP signaling pathway // not recorded /// 0030509 // BMP signaling pathway // inferred from electronic annotation /// 0030854 // positive regulation of granulocyte differentiation // inferred from direct assay /// 0030879 // mammary gland development // not recorded /// 0030879 // mammary gland development // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0032696 // negative regulation of interleukin-13 production // inferred from direct assay /// 0032713 // negative regulation of interleukin-4 production // inferred from direct assay /// 0032714 // negative regulation of interleukin-5 production // inferred from direct assay /// 0033153 // T cell receptor V(D)J recombination // inferred from electronic annotation /// 0042100 // B cell proliferation // not recorded /// 0042100 // B cell proliferation // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0043392 // negative regulation of DNA binding // inferred from direct assay /// 0043586 // tongue development // inferred from electronic annotation /// 0043588 // skin development // inferred from electronic annotation /// 0043923 // positive regulation by host of viral transcription // inferred from direct assay /// 0043966 // histone H3 acetylation // inferred from mutant phenotype /// 0043967 // histone H4 acetylation // inferred from mutant phenotype /// 0045063 // T-helper 1 cell differentiation // inferred from sequence or structural similarity /// 0045063 // T-helper 1 cell differentiation // inferred from electronic annotation /// 0045843 // negative regulation of striated muscle tissue development // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046632 // alpha-beta T cell differentiation // not recorded /// 0046632 // alpha-beta T cell differentiation // inferred from electronic annotation /// 0048069 // eye pigmentation // not recorded /// 0048341 // paraxial mesoderm formation // not recorded /// 0048341 // paraxial mesoderm formation // inferred from electronic annotation /// 0048468 // cell development // inferred from electronic annotation /// 0048699 // generation of neurons // not recorded /// 0048747 // muscle fiber development // not recorded /// 0050909 // sensory perception of taste // inferred from electronic annotation /// 0060021 // palate development // inferred from sequence or structural similarity /// 0060021 // palate development // inferred from electronic annotation /// 0060033 // anatomical structure regression // inferred from electronic annotation /// 0060070 // canonical Wnt receptor signaling pathway // inferred from direct assay /// 0060070 // canonical Wnt receptor signaling pathway // inferred from mutant phenotype /// 0060325 // face morphogenesis // not recorded /// 0060325 // face morphogenesis // inferred from electronic annotation /// 0060326 // cell chemotaxis // inferred from direct assay /// 0060561 // apoptotic process involved in morphogenesis // not recorded /// 0060561 // apoptotic process involved in morphogenesis // inferred from electronic annotation /// 0060710 // chorio-allantoic fusion // not recorded /// 0060710 // chorio-allantoic fusion // inferred from electronic annotation /// 0061153 // trachea gland development // not recorded /// 0061153 // trachea gland development // inferred from electronic annotation /// 0071353 // cellular response to interleukin-4 // inferred from direct assay /// 0071864 // positive regulation of cell proliferation in bone marrow // inferred from mutant phenotype /// 0071866 // negative regulation of apoptotic process in bone marrow // inferred from mutant phenotype /// 0071895 // odontoblast differentiation // not recorded /// 0071899 // negative regulation of estrogen receptor binding // inferred from direct assay /// 0090068 // positive regulation of cell cycle process // inferred from direct assay /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from mutant phenotype","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from direct assay /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0032993 // protein-DNA complex // inferred from direct assay","0003677 // DNA binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // not recorded /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from physical interaction /// 0008013 // beta-catenin binding // traceable author statement /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008301 // DNA binding, bending // inferred from sequence or structural similarity /// 0008301 // DNA binding, bending // inferred from electronic annotation /// 0030284 // estrogen receptor activity // inferred from direct assay /// 0030331 // estrogen receptor binding // inferred from direct assay /// 0035326 // enhancer binding // inferred from direct assay /// 0042393 // histone binding // inferred from physical interaction /// 0043027 // cysteine-type endopeptidase inhibitor activity involved in apoptotic process // inferred from mutant phenotype /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0045295 // gamma-catenin binding // inferred from physical interaction /// 0070016 // armadillo repeat domain binding // inferred from physical interaction /// 0070742 // C2H2 zinc finger domain binding // inferred from physical interaction","chr4:108969365-109088923 (-) // 93.75 // q25"]
["11728205_s_at",-0.17226124,-0.08417988,-0.053253174,0.053253174,0.1356268,0.057092667,0.13744573,0.014253176,-1.1369921,-0.18522222,1.1369921,"down","FAM120A",23196,"","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation","chr9:96213977-96328683 (+) // 95.88 // q22.31"]
["11726391_x_at",-0.05570793,-0.065253735,0.055707455,-0.14723444,0.17478466,0.13226795,0.78786534,0.52625597,-1.0533787,-0.075024195,1.0533787,"down","MZF1",7593,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:59073292-59084942 (-) // 95.54 // q13.43"]
["11740964_a_at",-0.14860296,-0.20399284,0.054466724,0.22262669,-0.054466724,0.11891222,0.4564326,0.15858138,-1.1447774,-0.19506711,1.1447774,"down","MTHFD2L",441024,"0000105 // histidine biosynthetic process // inferred from electronic annotation /// 0006164 // purine nucleotide biosynthetic process // inferred from electronic annotation /// 0006730 // one-carbon metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009086 // methionine biosynthetic process // inferred from electronic annotation /// 0009396 // folic acid-containing compound biosynthetic process // inferred from electronic annotation /// 0035999 // tetrahydrofolate interconversion // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004477 // methenyltetrahydrofolate cyclohydrolase activity // inferred from electronic annotation /// 0004487 // methylenetetrahydrofolate dehydrogenase (NAD+) activity // inferred from electronic annotation /// 0004488 // methylenetetrahydrofolate dehydrogenase (NADP+) activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr4:75023828-75168812 (+) // 96.21 // q13.3"]
["11751418_a_at",-0.19003439,0.005484104,-0.22385931,0.27334595,-0.0054836273,0.010709763,0.39494023,0.11779045,-1.1720173,-0.22899391,1.1720173,"down","PSD4",23550,"0016192 // vesicle-mediated transport // not recorded /// 0030182 // neuron differentiation // not recorded /// 0032012 // regulation of ARF protein signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005802 // trans-Golgi network // not recorded /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // not recorded","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005086 // ARF guanyl-nucleotide exchange factor activity // not recorded /// 0005086 // ARF guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation","chr2:113954918-113959298 (+) // 99.92 // q13"]
["11724513_a_at",-0.016096592,0.030369282,-0.21873331,-0.19643497,0.016096592,0.08766937,0.90981764,0.76129717,-1.0261658,-0.037263907,1.0261658,"down","SULT4A1",25830,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006790 // sulfur compound metabolic process // inferred from electronic annotation /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0050427 // 3'-phosphoadenosine 5'-phosphosulfate metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // non-traceable author statement /// 0005829 // cytosol // traceable author statement","0008146 // sulfotransferase activity // non-traceable author statement /// 0008146 // sulfotransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr22:44220388-44258398 (-) // 91.76 // q13.31"]
["11745910_a_at",-0.056190968,0.056190968,0.07852554,-0.072797775,-0.12994576,0.09785509,0.76327574,0.48795956,1.0432884,0.061137952,1.0432884,"up","CDK18",5129,"0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // non-traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004693 // cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // non-traceable author statement /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr1:205473692-205496613 (+) // 73.07 // q32.1"]
["11737581_a_at",0.14439487,-0.047013998,0.009919643,-0.024710178,-0.009919405,0.095118284,0.93847126,0.83010006,1.0108745,0.015603912,1.0108745,"up","CAPN9",10753,"0006508 // proteolysis // inferred from electronic annotation /// 0007586 // digestion // traceable author statement","0005622 // intracellular // inferred from electronic annotation","0004198 // calcium-dependent cysteine-type endopeptidase activity // inferred from electronic annotation /// 0004198 // calcium-dependent cysteine-type endopeptidase activity // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr1:230883160-230937855 (+) // 99.58 // q42.2"]
["11733430_a_at",0.11534858,-0.22340345,0.1084528,-0.040529013,-0.13882494,0.04052925,0.8934018,0.7255956,1.0326902,0.046407476,1.0326902,"up","C10orf90",118611,"0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007095 // mitotic cell cycle G2/M transition DNA damage checkpoint // inferred from electronic annotation /// 0009411 // response to UV // inferred from electronic annotation /// 0010212 // response to ionizing radiation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay","0042826 // histone deacetylase binding // inferred from electronic annotation","chr10:128113570-128210064 (-) // 99.43 // q26.2"]
["11723078_s_at",0.003610611,0.013016701,0.030103683,-0.15299797,-0.003610611,-0.096645355,0.33866492,0.08665565,1.0717697,0.09999495,1.0717697,"up","CXorf26",51260,"","","","chrX:75392741-75398424 (+) // 87.99 // q13.3"]
["11750388_a_at",-0.13123465,0.06921601,-0.06921601,0.09007454,-0.1322074,0.1390469,0.77079296,0.49874842,-1.0541277,-0.07604964,1.0541277,"down","HSF5",124535,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr17:56498135-56565701 (-) // 98.21 // q22"]
["11718857_a_at",-0.11005306,0.14780617,0.07654476,-0.1412282,-0.07654476,0.15518379,0.8542577,0.6444947,1.0417162,0.058962315,1.0417162,"up","NUDCD3",23386,"","","","chr7:44421964-44530479 (-) // 96.61 // p13"]
["11746665_a_at",-0.07430744,0.12288761,0.086470604,-0.27596664,0.074306965,-0.1334939,0.57577604,0.25608307,1.1147612,0.15673473,1.1147612,"up","GCFC1",94104,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation","chr21:34131666-34144103 (-) // 99.37 // q22.11"]
["AFFX-r2-TagF_at",-0.10591793,-0.015040398,0.22917318,-0.07705307,0.019767284,0.015040398,0.8610102,0.6575233,1.035375,0.050153386,1.035375,"up",-0.07705307,0.019767284,0.015040398,-0.10591793,-0.015040398,0.22917318]
["11747372_a_at",0.110033035,0.0019469261,-0.020040989,-0.0019464493,-0.008237839,0.047760963,0.8821681,0.7011066,1.0126395,0.018120697,1.0126395,"up","SYBU",55638,"","0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr8:110586881-110620304 (-) // 98.94 // q23.2"]
["11752727_a_at",-0.043684244,-0.21392536,0.16799021,0.043684244,0.06324983,-0.15574026,0.97256345,0.92214346,-1.0094744,-0.01360432,1.0094744,"down","INPP5E",56623,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0046488 // phosphatidylinositol metabolic process // inferred from electronic annotation /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation /// 0046855 // inositol phosphate dephosphorylation // inferred from electronic annotation /// 0046856 // phosphatidylinositol dephosphorylation // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0035085 // cilium axoneme // inferred from direct assay /// 0035085 // cilium axoneme // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0004439 // phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity // inferred from electronic annotation /// 0004445 // inositol-polyphosphate 5-phosphatase activity // traceable author statement /// 0004445 // inositol-polyphosphate 5-phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr9:139332733-139334275 (-) // 95.17 // q34.3"]
["11727946_at",0.050751686,-0.0005455017,0.0005455017,-0.0069818497,-0.027009964,0.06426573,0.94394064,0.8437052,1.0047426,0.006825984,1.0047426,"up","SHPK",23729,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0050277 // sedoheptulokinase activity // inferred from electronic annotation","chr17:3511555-3539616 (-) // 80.57 // p13.2"]
["11747659_a_at",-0.36287808,-0.27552366,-0.2343247,0.23882341,0.53148746,0.23432446,0.07619024,0.004030017,-1.5430527,-0.6257873,1.5430527,"down","ARMCX4",100131755,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chrX:100740396-100744305 (+) // 79.04 // q22.1"]
["11742601_at",-0.2596979,0.012434483,-0.012434244,-0.27056074,0.122386456,0.21532059,0.8088829,0.561719,-1.0784415,-0.10894792,1.0784415,"down","OR6C75",390323,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr12:55758894-55759833 (+) // 100.0 // q13.2"]
["11749597_x_at",0.10735607,-0.01475811,-0.13016987,0.16914749,-0.07424641,0.01475811,0.85477614,0.6453867,-1.0346029,-0.049077112,1.0346029,"down","UBAC2",337867,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr13:99853060-100037820 (+) // 94.69 // q32.3"]
["11744519_a_at",-0.069911,0.006925583,-0.015099525,0.03202629,0.06954861,-0.006925583,0.43670994,0.1441439,-1.0407172,-0.05757815,1.0407172,"down","POLE2",5427,"0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0000722 // telomere maintenance via recombination // traceable author statement /// 0000723 // telomere maintenance // traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0006261 // DNA-dependent DNA replication // inferred from electronic annotation /// 0006270 // DNA-dependent DNA replication initiation // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006297 // nucleotide-excision repair, DNA gap filling // traceable author statement /// 0032201 // telomere maintenance via semi-conservative replication // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003887 // DNA-directed DNA polymerase activity // inferred from electronic annotation /// 0003887 // DNA-directed DNA polymerase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation","chr14:50110272-50155140 (-) // 98.37 // q21.3"]
["11746776_a_at",-0.00029087067,0.14154005,0.0002913475,-0.17691946,0.117238045,-0.0038728714,0.7852756,0.5219493,1.0485277,0.068365,1.0485277,"up","RPRD1A",55197,"0070940 // dephosphorylation of RNA polymerase II C-terminal domain // inferred from mutant phenotype","0016591 // DNA-directed RNA polymerase II, holoenzyme // inferred from direct assay","","chr18:33605561-33647520 (-) // 97.8 // q12.2"]
["11738957_a_at",0.027945995,0.0060954094,-0.0060954094,-0.0060954094,0.07961035,-0.031496525,0.9644616,0.90001523,-1.0032567,-0.00469076,1.0032567,"down","PSPN",5623,"0001658 // branching involved in ureteric bud morphogenesis // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007417 // central nervous system development // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0005102 // receptor binding // traceable author statement /// 0008083 // growth factor activity // inferred from electronic annotation","chr19:6375304-6375860 (-) // 100.0 // p13.3"]
["11750801_a_at",-0.11931038,-0.07685566,-0.14434147,0.2091074,0.18638515,0.07685566,0.07545992,0.00393684,-1.2066038,-0.270952,1.2066038,"down","DLAT",1737,"0006085 // acetyl-CoA biosynthetic process // non-traceable author statement /// 0006086 // acetyl-CoA biosynthetic process from pyruvate // inferred from electronic annotation /// 0006090 // pyruvate metabolic process // traceable author statement /// 0006090 // pyruvate metabolic process // inferred from electronic annotation /// 0006096 // glycolysis // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010510 // regulation of acetyl-CoA biosynthetic process from pyruvate // traceable author statement /// 0030431 // sleep // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0005967 // mitochondrial pyruvate dehydrogenase complex // non-traceable author statement /// 0045254 // pyruvate dehydrogenase complex // inferred from electronic annotation","0004742 // dihydrolipoyllysine-residue acetyltransferase activity // non-traceable author statement /// 0004742 // dihydrolipoyllysine-residue acetyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation","chr11:111896131-111933495 (+) // 99.95 // q23.1"]
["11746724_a_at",-0.041332245,0.041332245,0.17827845,-0.13167667,-0.048865795,0.21709776,0.891349,0.72082067,1.033287,0.04724109,1.033287,"up","BTN2A3P",54718,"","0016021 // integral to membrane // inferred from electronic annotation","","chr6:26421618-26431323 (+) // 87.3 // p22.2"]
["11760418_a_at",-0.25084162,0.13027334,0.18621397,-0.54666233,-0.030686855,0.030686855,0.7183219,0.42287448,1.1519697,0.20410272,1.1519697,"up","RCAN1",1827,"0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007417 // central nervous system development // traceable author statement /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008015 // blood circulation // traceable author statement /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0019722 // calcium-mediated signaling // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0043666 // regulation of phosphoprotein phosphatase activity // inferred from electronic annotation /// 0048741 // skeletal muscle fiber development // inferred from electronic annotation /// 0051151 // negative regulation of smooth muscle cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr21:35891715-35899122 (-) // 85.86 // q22.12"]
["11732244_at",-0.13820148,-0.100528955,-0.007991552,0.2319088,0.007991791,0.1689682,0.2487825,0.04710476,-1.1635476,-0.21853027,1.1635476,"down","APOL6",80830,"0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // non-traceable author statement /// 0006869 // lipid transport // inferred from electronic annotation /// 0042157 // lipoprotein metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0005319 // lipid transporter activity // non-traceable author statement /// 0008289 // lipid binding // inferred from electronic annotation","chr22:36044416-36064407 (+) // 18.3 // q12.3"]
["11748080_a_at",0.34972286,0.069319725,0.14584446,-0.18612957,-0.069319725,-0.071175575,0.20585036,0.032151747,1.2287323,0.2971707,1.2287323,"up","DLST",1743,"0006091 // generation of precursor metabolites and energy // traceable author statement /// 0006099 // tricarboxylic acid cycle // traceable author statement /// 0006099 // tricarboxylic acid cycle // inferred from electronic annotation /// 0006103 // 2-oxoglutarate metabolic process // inferred from electronic annotation /// 0006554 // lysine catabolic process // traceable author statement /// 0006734 // NADH metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0033512 // L-lysine catabolic process to acetyl-CoA via saccharopine // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005792 // microsome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045252 // oxoglutarate dehydrogenase complex // inferred from electronic annotation","0004149 // dihydrolipoyllysine-residue succinyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0031072 // heat shock protein binding // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from electronic annotation","chr14:75348593-75369155 (+) // 94.43 // q24.3 /// chr1:76208984-76210467 (-) // 92.42 // p31.1"]
["11719717_x_at",0.18145847,-0.008331299,0.008330345,0.0233984,-0.034650803,-0.15257645,0.5391806,0.22249843,1.0830467,0.115095414,1.0830467,"up","PPP1R14B",26472,"0042325 // regulation of phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0004864 // protein phosphatase inhibitor activity // inferred from electronic annotation /// 0008599 // protein phosphatase type 1 regulator activity // inferred from electronic annotation /// 0019212 // phosphatase inhibitor activity // inferred from electronic annotation","chr11:64011950-64014413 (-) // 86.0 // q13.1"]
["11760183_at",-0.1854043,0.024638653,-0.07656574,0.04170704,-0.01928997,0.01928997,0.5299802,0.21512456,-1.0665952,-0.093012735,1.0665952,"down","PLK1S1",55857,"0007051 // spindle organization // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction","chr20:21106680-21227260 (+) // 80.95 // p11.23"]
["11749648_a_at",0.01986599,-0.07975292,-0.052204132,0.13376713,0.11423302,-0.01986599,0.39236885,0.11604236,-1.0817809,-0.11340834,1.0817809,"down","HIF1A",3091,"0001525 // angiogenesis // inferred from electronic annotation /// 0001568 // blood vessel development // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from direct assay /// 0001666 // response to hypoxia // inferred from mutant phenotype /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001755 // neural crest cell migration // inferred from electronic annotation /// 0001837 // epithelial to mesenchymal transition // inferred from sequence or structural similarity /// 0001837 // epithelial to mesenchymal transition // inferred from electronic annotation /// 0001892 // embryonic placenta development // inferred from electronic annotation /// 0001922 // B-1 B cell homeostasis // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // inferred by curator /// 0001944 // vasculature development // inferred from electronic annotation /// 0001947 // heart looping // inferred from electronic annotation /// 0002052 // positive regulation of neuroblast proliferation // inferred from electronic annotation /// 0002248 // connective tissue replacement involved in inflammatory response wound healing // inferred from sequence or structural similarity /// 0002248 // connective tissue replacement involved in inflammatory response wound healing // inferred from electronic annotation /// 0003151 // outflow tract morphogenesis // inferred from electronic annotation /// 0003208 // cardiac ventricle morphogenesis // inferred from electronic annotation /// 0006089 // lactate metabolic process // inferred from electronic annotation /// 0006110 // regulation of glycolysis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype /// 0007165 // signal transduction // inferred from electronic annotation /// 0007219 // Notch signaling pathway // traceable author statement /// 0007595 // lactation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008542 // visual learning // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from direct assay /// 0010573 // vascular endothelial growth factor production // inferred from direct assay /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from direct assay /// 0010634 // positive regulation of epithelial cell migration // inferred from sequence or structural similarity /// 0010634 // positive regulation of epithelial cell migration // inferred from electronic annotation /// 0010870 // positive regulation of receptor biosynthetic process // inferred from mutant phenotype /// 0014850 // response to muscle activity // inferred from electronic annotation /// 0019896 // axon transport of mitochondrion // inferred from mutant phenotype /// 0021502 // neural fold elevation formation // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030502 // negative regulation of bone mineralization // inferred from electronic annotation /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // inferred by curator /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // inferred from electronic annotation /// 0032007 // negative regulation of TOR signaling cascade // inferred from electronic annotation /// 0032364 // oxygen homeostasis // inferred from direct assay /// 0032364 // oxygen homeostasis // inferred from electronic annotation /// 0032722 // positive regulation of chemokine production // traceable author statement /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0032909 // regulation of transforming growth factor beta2 production // inferred from mutant phenotype /// 0032963 // collagen metabolic process // inferred from sequence or structural similarity /// 0032963 // collagen metabolic process // inferred from electronic annotation /// 0035162 // embryonic hemopoiesis // inferred from electronic annotation /// 0035774 // positive regulation of insulin secretion involved in cellular response to glucose stimulus // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042541 // hemoglobin biosynthetic process // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0042789 // mRNA transcription from RNA polymerase II promoter // inferred by curator /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043619 // regulation of transcription from RNA polymerase II promoter in response to oxidative stress // inferred from direct assay /// 0043619 // regulation of transcription from RNA polymerase II promoter in response to oxidative stress // inferred from electronic annotation /// 0045648 // positive regulation of erythrocyte differentiation // inferred by curator /// 0045648 // positive regulation of erythrocyte differentiation // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred by curator /// 0045821 // positive regulation of glycolysis // inferred by curator /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045926 // negative regulation of growth // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046716 // muscle cell homeostasis // inferred from electronic annotation /// 0046886 // positive regulation of hormone biosynthetic process // inferred from direct assay /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0048546 // digestive tract morphogenesis // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051000 // positive regulation of nitric-oxide synthase activity // traceable author statement /// 0051216 // cartilage development // inferred from electronic annotation /// 0051541 // elastin metabolic process // inferred from sequence or structural similarity /// 0051541 // elastin metabolic process // inferred from electronic annotation /// 0060574 // intestinal epithelial cell maturation // inferred from electronic annotation /// 0061030 // epithelial cell differentiation involved in mammary gland alveolus development // inferred from electronic annotation /// 0061298 // retina vasculature development in camera-type eye // inferred from electronic annotation /// 0070101 // positive regulation of chemokine-mediated signaling pathway // inferred by curator /// 0071347 // cellular response to interleukin-1 // inferred from expression pattern /// 0071456 // cellular response to hypoxia // inferred from direct assay /// 0071456 // cellular response to hypoxia // inferred from expression pattern /// 0071542 // dopaminergic neuron differentiation // inferred from electronic annotation /// 2001054 // negative regulation of mesenchymal cell apoptotic process // inferred from electronic annotation /// 2001141 // regulation of RNA biosynthetic process // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from physical interaction /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0009434 // microtubule-based flagellum // inferred from electronic annotation","0000988 // protein binding transcription factor activity // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0035035 // histone acetyltransferase binding // inferred from physical interaction /// 0042826 // histone deacetylase binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0046982 // protein heterodimerization activity // traceable author statement /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0051879 // Hsp90 protein binding // inferred from direct assay","chr14:62164339-62214489 (+) // 98.21 // q23.2"]
["11722049_a_at",-0.019434452,-0.09055328,0.019434452,-0.021776676,0.14279747,0.1479311,0.4243378,0.13612829,-1.0866107,-0.11983512,1.0866107,"down","DUSP6",1848,"0000188 // inactivation of MAPK activity // inferred from direct assay /// 0001933 // negative regulation of protein phosphorylation // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0008063 // Toll signaling pathway // traceable author statement /// 0009953 // dorsal/ventral pattern formation // not recorded /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from direct assay /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0040036 // regulation of fibroblast growth factor receptor signaling pathway // not recorded /// 0042493 // response to drug // inferred from electronic annotation /// 0042663 // regulation of endodermal cell fate specification // not recorded /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0051409 // response to nitrosative stress // inferred from expression pattern /// 0060420 // regulation of heart growth // not recorded /// 0060420 // regulation of heart growth // inferred from electronic annotation /// 0070373 // negative regulation of ERK1 and ERK2 cascade // inferred from mutant phenotype /// 0070373 // negative regulation of ERK1 and ERK2 cascade // inferred from electronic annotation /// 0070848 // response to growth factor stimulus // inferred from electronic annotation","0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // not recorded","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0017017 // MAP kinase tyrosine/serine/threonine phosphatase activity // inferred from direct assay /// 0017017 // MAP kinase tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation","chr12:89741015-89746296 (-) // 99.43 // q21.33"]
["11716419_at",0.041094303,-0.018371582,-0.046999454,-0.19629192,0.018371582,0.06822634,0.9074209,0.75501835,1.0199316,0.02847234,1.0199316,"up","SPTBN1",6711,"0000281 // cytokinesis after mitosis // inferred from mutant phenotype /// 0007009 // plasma membrane organization // inferred from mutant phenotype /// 0007182 // common-partner SMAD protein phosphorylation // inferred from electronic annotation /// 0007184 // SMAD protein import into nucleus // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0043001 // Golgi to plasma membrane protein transport // inferred from mutant phenotype /// 0051693 // actin filament capping // inferred from electronic annotation /// 0071709 // membrane assembly // inferred from mutant phenotype /// 0072661 // protein targeting to plasma membrane // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008091 // spectrin // inferred from electronic annotation /// 0008091 // spectrin // traceable author statement /// 0014731 // spectrin-associated cytoskeleton // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030863 // cortical cytoskeleton // inferred from electronic annotation /// 0031430 // M band // inferred from electronic annotation /// 0032437 // cuticular plate // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0003779 // actin binding // traceable author statement /// 0005200 // structural constituent of cytoskeleton // inferred from mutant phenotype /// 0005200 // structural constituent of cytoskeleton // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0030506 // ankyrin binding // inferred from physical interaction /// 0030506 // ankyrin binding // non-traceable author statement","chr2:54683453-54898582 (+) // 94.95 // p16.2"]
["11736605_a_at",0.2952404,-0.0011034012,-0.101029396,0.4071045,0.0011034012,-0.05169964,0.91957176,0.7859039,-1.0384753,-0.054466866,1.0384753,"down","XPO7",23039,"0006611 // protein export from nucleus // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from direct assay /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005049 // nuclear export signal receptor activity // inferred from direct assay /// 0008565 // protein transporter activity // inferred from electronic annotation","chr8:21823748-21864091 (+) // 97.03 // p21.3"]
["11753463_a_at",-0.14572239,0.051713943,0.011320114,-0.03691721,0.036917686,-0.011320114,0.8948778,0.72892696,-1.0166264,-0.02378954,1.0166264,"down","SLC2A5",6518,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0015755 // fructose transport // traceable author statement /// 0015755 // fructose transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0015758 // glucose transport // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0005353 // fructose transmembrane transporter activity // inferred from electronic annotation /// 0005353 // fructose transmembrane transporter activity // traceable author statement /// 0005355 // glucose transmembrane transporter activity // inferred from electronic annotation /// 0005355 // glucose transmembrane transporter activity // traceable author statement /// 0022857 // transmembrane transporter activity // inferred from electronic annotation /// 0022891 // substrate-specific transmembrane transporter activity // inferred from electronic annotation","chr1:9101499-9129655 (-) // 96.82 // p36.23"]
["11756170_a_at",0.07495165,-0.22456598,-0.25663757,0.28563643,0.06281233,-0.06281233,0.5001511,0.19109973,-1.1733468,-0.23062943,1.1733468,"down","CXorf38",159013,"","","","chrX:40489188-40506783 (-) // 77.56 // p11.4"]
["11730604_at",-0.051018715,0.022549152,0.253232,-0.22031403,-0.022549152,0.32357502,0.9281556,0.8064685,1.0338428,0.04801684,1.0338428,"up","EPB41L4B",54566,"0031032 // actomyosin structure organization // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0019898 // extrinsic to membrane // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from direct assay","0005200 // structural constituent of cytoskeleton // traceable author statement /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation","chr9:111934253-112083021 (-) // 79.56 // q31.3"]
["11750408_a_at",0.26365185,-0.007555008,-0.13313007,0.16520691,-0.15449238,0.007555008,0.9369819,0.82641065,1.0244851,0.03489902,1.0244851,"up","CD97",976,"0006928 // cellular component movement // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0006955 // immune response // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation","chr19:14492255-14519172 (+) // 99.78 // p13.12"]
["11727078_s_at",-0.082894325,0.020534515,-0.05704403,0.027030945,-0.020534515,0.057955742,0.49524492,0.18718329,-1.0433949,-0.061285317,1.0433949,"down","NUFIP1",26747,"0000492 // box C/D snoRNP assembly // inferred from mutant phenotype /// 0006396 // RNA processing // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005726 // perichromatin fibrils // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0008023 // transcription elongation factor complex // inferred from direct assay /// 0016363 // nuclear matrix // inferred from direct assay /// 0022626 // cytosolic ribosome // inferred from direct assay /// 0048786 // presynaptic active zone // inferred from direct assay /// 0070761 // pre-snoRNP complex // inferred from direct assay","0003677 // DNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0030515 // snoRNA binding // inferred from direct assay /// 0030674 // protein binding, bridging // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr13:45513197-45563618 (-) // 92.27 // q14.12"]
["11738063_a_at",-0.11828017,0.23981023,0.0068335533,-0.40652418,0.033282995,-0.0068335533,0.69341844,0.38832036,1.1246526,0.16947946,1.1246526,"up","S100A7A",338324,"","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:153390419-153395697 (+) // 79.13 // q21.3"]
["11725461_s_at",-0.07404804,-0.19469786,-0.19288635,0.13881731,0.07712364,0.07404852,0.08487032,0.0051597445,-1.1896528,-0.25054058,1.1896528,"down","MAU2",23383,"0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0034088 // maintenance of mitotic sister chromatid cohesion // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0032116 // SMC loading complex // inferred from direct assay /// 0032116 // SMC loading complex // inferred from mutant phenotype","0005515 // protein binding // inferred from physical interaction /// 0047485 // protein N-terminus binding // inferred from physical interaction","chr19:19431622-19469562 (+) // 94.36 // p13.11"]
["11734768_s_at",0.11835575,-0.07537651,-0.05297184,0.11336517,0.05297184,-0.08213997,0.89480424,0.7280533,-1.0220009,-0.03139648,1.0220009,"down","THOC2",57187,"0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0046784 // intronless viral mRNA export from host nucleus // inferred from direct assay /// 0051028 // mRNA transport // inferred from electronic annotation","0000346 // transcription export complex // inferred from direct assay /// 0000347 // THO complex // inferred from direct assay /// 0000445 // THO complex part of transcription export complex // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chrX:122734412-122866903 (-) // 97.35 // q25"]
["11760574_x_at",-0.011654854,-0.016694069,-0.06811333,0.018021584,0.09779024,0.011654854,0.3393014,0.08692681,-1.0531003,-0.07464291,1.0531003,"down","FOSL1",8061,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006935 // chemotaxis // traceable author statement /// 0006968 // cellular defense response // traceable author statement /// 0007565 // female pregnancy // inferred from electronic annotation /// 0007612 // learning // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009615 // response to virus // traceable author statement /// 0009629 // response to gravity // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0031668 // cellular response to extracellular stimulus // inferred from electronic annotation /// 0032570 // response to progesterone stimulus // inferred from electronic annotation /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0045787 // positive regulation of cell cycle // inferred from electronic annotation /// 0046022 // positive regulation of transcription from RNA polymerase II promoter during mitosis // inferred from electronic annotation /// 0051412 // response to corticosterone stimulus // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005792 // microsome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr11:65659089-65667859 (-) // 89.2 // q13.1"]
["11716069_at",0.1863985,-0.034244537,0.033428192,0.16180229,-0.033428192,-0.079977036,0.8653895,0.66727585,1.0322042,0.045728337,1.0322042,"up","DESI2",51029,"0006508 // proteolysis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr1:244816055-244872335 (+) // 97.71 // q44"]
["11752684_a_at",0.05429101,0.012357235,-0.060498714,0.052720547,-0.2295208,-0.012357235,0.78234833,0.5168517,1.0461591,0.06510234,1.0461591,"up","C12orf40",283461,"","","","chr12:40019971-40085987 (+) // 98.98 // q12"]
["11718352_a_at",0.093818665,0.012511253,0.07050133,-0.012511253,-0.087005615,-0.17341328,0.24556908,0.045878116,1.1095083,0.14992043,1.1095083,"up","VPS33B",26276,"0006810 // transport // inferred from electronic annotation /// 0006904 // vesicle docking involved in exocytosis // inferred from electronic annotation /// 0006944 // cellular membrane fusion // inferred from mutant phenotype /// 0015031 // protein transport // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from direct assay /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0032400 // melanosome localization // inferred from direct assay /// 0032418 // lysosome localization // inferred from direct assay /// 0070889 // platelet alpha granule organization // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030897 // HOPS complex // inferred from direct assay /// 0031091 // platelet alpha granule // inferred from direct assay /// 0031902 // late endosome membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr15:91541646-91565851 (-) // 95.32 // q26.1"]
["11731308_a_at",0.025618553,0.14901376,-0.010392666,0,0,-0.0003709793,0.63676494,0.31909746,1.0387657,0.054870237,1.0387657,"up","KCNIP4",80333,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005267 // potassium channel activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation","chr4:20730233-21699397 (-) // 94.26 // p15.31"]
["11754937_a_at",0.0677681,0.0037784576,0.04921913,-0.0037784576,-0.041664124,-0.09643459,0.27271882,0.05649274,1.0625625,0.08754765,1.0625625,"up","GMNN",51053,"0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006275 // regulation of DNA replication // inferred from electronic annotation /// 0006461 // protein complex assembly // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008156 // negative regulation of DNA replication // inferred from direct assay /// 0008156 // negative regulation of DNA replication // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0045786 // negative regulation of cell cycle // inferred from direct assay /// 0045786 // negative regulation of cell cycle // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003714 // transcription corepressor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0070491 // repressing transcription factor binding // inferred from electronic annotation","chr6:24775163-24786323 (+) // 93.53 // p22.3"]
["11715217_s_at",-0.040787697,0.0136060715,0.11423588,-0.03344345,-0.0136060715,0.41361952,0.81619614,0.57479906,-1.0667129,-0.09317187,1.0667129,"down","MOGAT2",80168,"0006071 // glycerol metabolic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006651 // diacylglycerol biosynthetic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0019432 // triglyceride biosynthetic process // inferred from electronic annotation /// 0050892 // intestinal absorption // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003846 // 2-acylglycerol O-acyltransferase activity // inferred from electronic annotation /// 0016407 // acetyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation","chr11:75428933-75442331 (+) // 100.0 // q13.5"]
["11740414_a_at",0.12950802,0.021781921,-0.048056126,0.2952466,-0.13932323,-0.021781445,0.98069876,0.9447428,-1.0071669,-0.0103027215,1.0071669,"down","TLE1",7088,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0009887 // organ morphogenesis // traceable author statement /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0030178 // negative regulation of Wnt receptor signaling pathway // non-traceable author statement /// 0043124 // negative regulation of I-kappaB kinase/NF-kappaB cascade // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation","0001106 // RNA polymerase II transcription corepressor activity // inferred from direct assay /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from direct assay /// 0008134 // transcription factor binding // inferred from physical interaction","chr9:84198597-84303596 (-) // 98.4 // q21.32"]
["11748161_at",-0.09206581,-0.004784107,-0.024629593,0.06905222,0.0421443,0.004784107,0.3044982,0.07055333,-1.0563979,-0.07915336,1.0563979,"down","XRCC3",7517,"0006259 // DNA metabolic process // inferred from electronic annotation /// 0006281 // DNA repair // inferred from genetic interaction /// 0006281 // DNA repair // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006310 // DNA recombination // traceable author statement /// 0006974 // response to DNA damage stimulus // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008094 // DNA-dependent ATPase activity // inferred from electronic annotation","chr14:104177606-104179257 (+) // 94.76 // q32.33"]
["11750614_x_at",-0.067866325,0.021821976,0.010585785,-0.05790615,-0.010585785,0.1877842,0.80551094,0.55593556,-1.036402,-0.051583685,1.036402,"down","GRIN1",2902,"0001661 // conditioned taste aversion // inferred from electronic annotation /// 0001964 // startle response // inferred from electronic annotation /// 0001967 // suckling behavior // inferred from electronic annotation /// 0001975 // response to amphetamine // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from direct assay /// 0006812 // cation transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007585 // respiratory gaseous exchange // inferred from electronic annotation /// 0007611 // learning or memory // inferred from electronic annotation /// 0007612 // learning // inferred from electronic annotation /// 0007613 // memory // inferred from electronic annotation /// 0007616 // long-term memory // inferred from electronic annotation /// 0008306 // associative learning // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0008355 // olfactory learning // inferred from electronic annotation /// 0008542 // visual learning // inferred from electronic annotation /// 0008542 // visual learning // inferred from sequence or structural similarity /// 0010646 // regulation of cell communication // inferred from electronic annotation /// 0019233 // sensory perception of pain // inferred from electronic annotation /// 0021586 // pons maturation // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0035176 // social behavior // inferred from electronic annotation /// 0035235 // ionotropic glutamate receptor signaling pathway // inferred from sequence or structural similarity /// 0035235 // ionotropic glutamate receptor signaling pathway // inferred from electronic annotation /// 0035249 // synaptic transmission, glutamatergic // inferred from electronic annotation /// 0042391 // regulation of membrane potential // inferred from direct assay /// 0042391 // regulation of membrane potential // inferred from electronic annotation /// 0043278 // response to morphine // inferred from electronic annotation /// 0043523 // regulation of neuron apoptotic process // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043576 // regulation of respiratory gaseous exchange // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0048168 // regulation of neuronal synaptic plasticity // inferred from electronic annotation /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048814 // regulation of dendrite morphogenesis // inferred from electronic annotation /// 0050770 // regulation of axonogenesis // inferred from electronic annotation /// 0050905 // neuromuscular process // inferred from electronic annotation /// 0051963 // regulation of synapse assembly // inferred from electronic annotation /// 0055074 // calcium ion homeostasis // inferred from sequence or structural similarity /// 0055074 // calcium ion homeostasis // inferred from electronic annotation /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from electronic annotation /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from sequence or structural similarity /// 0060134 // prepulse inhibition // inferred from electronic annotation /// 0060179 // male mating behavior // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from direct assay /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation /// 2000463 // positive regulation of excitatory postsynaptic membrane potential // inferred from sequence or structural similarity","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from sequence or structural similarity /// 0009986 // cell surface // inferred from sequence or structural similarity /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0017146 // N-methyl-D-aspartate selective glutamate receptor complex // inferred from direct assay /// 0017146 // N-methyl-D-aspartate selective glutamate receptor complex // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0019717 // synaptosome // inferred from sequence or structural similarity /// 0030054 // cell junction // inferred from electronic annotation /// 0030288 // outer membrane-bounded periplasmic space // inferred from electronic annotation /// 0030425 // dendrite // inferred from direct assay /// 0043083 // synaptic cleft // inferred from sequence or structural similarity /// 0043195 // terminal button // inferred from sequence or structural similarity /// 0043197 // dendritic spine // inferred from sequence or structural similarity /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045202 // synapse // inferred from sequence or structural similarity /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from sequence or structural similarity /// 0060076 // excitatory synapse // inferred from sequence or structural similarity","0004872 // receptor activity // inferred from electronic annotation /// 0004970 // ionotropic glutamate receptor activity // inferred from electronic annotation /// 0004972 // N-methyl-D-aspartate selective glutamate receptor activity // inferred from direct assay /// 0004972 // N-methyl-D-aspartate selective glutamate receptor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from electronic annotation /// 0005215 // transporter activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005234 // extracellular-glutamate-gated ion channel activity // inferred from electronic annotation /// 0005261 // cation channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from direct assay /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from sequence or structural similarity /// 0016594 // glycine binding // inferred from direct assay /// 0016594 // glycine binding // inferred from electronic annotation /// 0016594 // glycine binding // inferred from mutant phenotype /// 0016595 // glutamate binding // inferred from direct assay /// 0042165 // neurotransmitter binding // inferred from sequence or structural similarity","chr9:140033888-140062648 (+) // 96.03 // q34.3"]
["11719784_x_at",-0.03922081,-0.24377108,-0.31163788,0.3338604,0.045818806,0.03922081,0.27256677,0.056422617,-1.2638658,-0.3378433,1.2638658,"down","RPS23",6228,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // non-traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from electronic annotation /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr5:81569560-81574396 (-) // 67.09 // q14.2"]
["11716140_x_at",0.0037679672,-0.0037670135,0.02092266,0.053515434,-0.14131641,-0.14636707,0.58781844,0.2683651,1.0607102,0.08503053,1.0607102,"up","SMS",6611,"0006555 // methionine metabolic process // traceable author statement /// 0006595 // polyamine metabolic process // traceable author statement /// 0006597 // spermine biosynthetic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005829 // cytosol // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004766 // spermidine synthase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016768 // spermine synthase activity // inferred from electronic annotation","chrX:21958622-22012951 (+) // 92.13 // p22.11"]
["11733197_a_at",-0.18923616,-0.14633894,-0.20297289,0.40628386,0.3422718,0.14633894,0.0756834,0.003953963,-1.3926321,-0.4778142,1.3926321,"down","KIAA1586",57691,"","","0003676 // nucleic acid binding // inferred from electronic annotation","chr6:56911329-56920119 (+) // 85.61 // p12.1"]
["11728613_a_at",0.036956787,-0.15066767,-0.028067589,-0.06327343,0.053002357,0.028067589,0.7456471,0.46155578,-1.0375577,-0.0531916,1.0375577,"down","TRIM10",10107,"0030218 // erythrocyte differentiation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:30119721-30128711 (-) // 83.44 // p22.1"]
["11742187_a_at",-0.12327051,0.006960392,0.0602417,-0.0069601536,-0.07009101,0.050812244,0.95963824,0.88535315,-1.0069159,-0.009943229,1.0069159,"down","PRDM16",63976,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from mutant phenotype /// 0030853 // negative regulation of granulocyte differentiation // inferred from direct assay /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0043457 // regulation of cellular respiration // inferred from sequence or structural similarity /// 0043457 // regulation of cellular respiration // inferred from electronic annotation /// 0043586 // tongue development // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0050872 // white fat cell differentiation // inferred from electronic annotation /// 0050873 // brown fat cell differentiation // inferred from sequence or structural similarity /// 0050873 // brown fat cell differentiation // inferred from electronic annotation /// 0060021 // palate development // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from sequence or structural similarity /// 0017053 // transcriptional repressor complex // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from sequence or structural similarity /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046332 // SMAD binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:2985743-3355183 (+) // 98.56 // p36.32"]
["11718918_x_at",0.21350956,-0.016870499,-0.09592438,0.45599365,-0.084028244,0.016870499,0.8515611,0.63978314,-1.068836,-0.09604047,1.068836,"down","PAK4",10298,"0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006928 // cellular component movement // traceable author statement /// 0007010 // cytoskeleton organization // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0016049 // cell growth // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // non-traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr19:39616419-39670042 (+) // 94.46 // q13.2"]
["11760799_x_at",0.0010881424,-0.001087904,0.03452182,-0.08453417,0.07451463,-0.060016394,0.79025406,0.5300937,1.0244522,0.034852684,1.0244522,"up","HLA-DPB1",3115,"0002504 // antigen processing and presentation of peptide or polysaccharide antigen via MHC class II // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0031295 // T cell costimulation // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042613 // MHC class II protein complex // inferred from electronic annotation","0032395 // MHC class II receptor activity // traceable author statement","chr6:33043734-33054718 (+) // 95.42 // p21.32"]
["11717902_at",0.2753725,0.18598175,0.14281559,-0.14281559,-0.25592422,-0.34702206,0.06813885,0.0031401936,1.3660188,0.4499773,1.3660188,"up","IER3IP1",51124,"0042981 // regulation of apoptotic process // inferred from mutant phenotype","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr18:44681412-44702735 (-) // 93.75 // q21.1"]
["11716574_at",0.06273174,0.089860916,0.18823147,-0.13700008,-0.06273174,-0.22848988,0.13554753,0.013857982,1.1944518,0.25634864,1.1944518,"up","KDM3A",55818,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0009755 // hormone-mediated signaling pathway // inferred from direct assay /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030521 // androgen receptor signaling pathway // inferred from direct assay /// 0033169 // histone H3-K9 demethylation // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0046293 // formaldehyde biosynthetic process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0005506 // iron ion binding // inferred from mutant phenotype /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050681 // androgen receptor binding // inferred from direct assay","chr2:86668264-86720892 (+) // 88.67 // p11.2"]
["11756257_a_at",0.18952227,-0.09569216,-0.010402203,0.06400442,-0.0019130707,0.0019130707,0.980567,0.94436455,1.0044979,0.0064745275,1.0044979,"up","FLYWCH1",84256,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:2983149-2999810 (+) // 97.1 // p13.3"]
["11740642_at",-0.04487872,0.27467704,-0.016600609,0.016600609,-0.04487872,0.07740927,0.8513609,0.63941085,1.038635,0.054688767,1.038635,"up","PLAC8",51316,"","","","chr4:84013986-84035911 (-) // 69.65 // q21.22"]
["11752908_a_at",-0.07488632,-0.06003189,0.00908947,0.13081741,0.25856018,-0.00908947,0.37690148,0.1072485,-1.1240495,-0.16870563,1.1240495,"down","TCEA1",6917,"0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006414 // translational elongation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0030218 // erythrocyte differentiation // inferred from electronic annotation /// 0032784 // regulation of transcription elongation, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0050434 // positive regulation of viral transcription // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:37317046-37319022 (+) // 98.95 // p22.2 /// chr8:54879729-54934829 (-) // 99.93 // q11.23"]
["11742745_a_at",0.19451332,-0.1107564,0.005924225,0.011681557,-0.005924225,-0.07255554,0.832157,0.6031736,1.0368159,0.052159723,1.0368159,"up","LOC100509484 /// PLIN2","100509484 /// 123","0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0015909 // long-chain fatty acid transport // inferred from electronic annotation /// 0019915 // lipid storage // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005811 // lipid particle // inferred from direct assay /// 0005811 // lipid particle // inferred from electronic annotation /// 0005811 // lipid particle // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","","chr9:19115323-19127577 (-) // 84.68 // p22.1"]
["11726196_a_at",-0.38047218,0.0059962273,-0.10490608,-0.0059962273,0.0059962273,0.08675718,0.49439216,0.18655741,-1.1397465,-0.18871303,1.1397465,"down","SYN2",6854,"0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation","0008021 // synaptic vesicle // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation","chr3:12045836-12233532 (+) // 91.42 // p25.2"]
["11740955_a_at",0.2505374,0.051160336,-0.03580618,0.012606621,-0.05170536,-0.012606621,0.60954624,0.28957903,1.0761399,0.10586568,1.0761399,"up","PLEKHN1",84069,"","","0005543 // phospholipid binding // inferred from electronic annotation","chr1:901876-910478 (+) // 98.84 // p36.33"]
["11727341_a_at",-0.03861761,0.08379507,-0.1167202,0.028051853,-0.028051853,0.04329729,0.8146787,0.5718832,-1.0268888,-0.03828003,1.0268888,"down","ATG9B",285973,"0000045 // autophagic vacuole assembly // inferred from direct assay /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001542 // ovulation from ovarian follicle // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001974 // blood vessel remodeling // inferred from electronic annotation /// 0001974 // blood vessel remodeling // inferred from sequence or structural similarity /// 0002028 // regulation of sodium ion transport // inferred from electronic annotation /// 0003100 // regulation of systemic arterial blood pressure by endothelin // inferred from mutant phenotype /// 0006527 // arginine catabolic process // inferred from direct assay /// 0006809 // nitric oxide biosynthetic process // inferred from direct assay /// 0006809 // nitric oxide biosynthetic process // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from sequence or structural similarity /// 0007005 // mitochondrion organization // inferred from sequence or structural similarity /// 0007165 // signal transduction // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008217 // regulation of blood pressure // non-traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0009408 // response to heat // non-traceable author statement /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0010288 // response to lead ion // inferred from electronic annotation /// 0010544 // negative regulation of platelet activation // non-traceable author statement /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014740 // negative regulation of muscle hyperplasia // inferred from electronic annotation /// 0014740 // negative regulation of muscle hyperplasia // inferred from sequence or structural similarity /// 0014806 // smooth muscle hyperplasia // inferred from electronic annotation /// 0014806 // smooth muscle hyperplasia // inferred from sequence or structural similarity /// 0030324 // lung development // inferred from electronic annotation /// 0031284 // positive regulation of guanylate cyclase activity // inferred from mutant phenotype /// 0031284 // positive regulation of guanylate cyclase activity // inferred from sequence or structural similarity /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0034405 // response to fluid shear stress // inferred from expression pattern /// 0042493 // response to drug // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043200 // response to amino acid stimulus // inferred from electronic annotation /// 0043267 // negative regulation of potassium ion transport // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0043542 // endothelial cell migration // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from sequence or structural similarity /// 0045909 // positive regulation of vasodilation // non-traceable author statement /// 0046209 // nitric oxide metabolic process // traceable author statement /// 0048662 // negative regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050880 // regulation of blood vessel size // inferred from electronic annotation /// 0050880 // regulation of blood vessel size // inferred from sequence or structural similarity /// 0050880 // regulation of blood vessel size // non-traceable author statement /// 0050999 // regulation of nitric-oxide synthase activity // traceable author statement /// 0051346 // negative regulation of hydrolase activity // inferred from electronic annotation /// 0051926 // negative regulation of calcium ion transport // inferred from electronic annotation /// 0055093 // response to hyperoxia // inferred from electronic annotation /// 0055094 // response to lipoprotein stimulus // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from electronic annotation","0000139 // Golgi membrane // traceable author statement /// 0000421 // autophagic vacuole membrane // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005901 // caveola // inferred from direct assay /// 0005901 // caveola // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation","0003785 // actin monomer binding // inferred from physical interaction /// 0004517 // nitric-oxide synthase activity // inferred from direct assay /// 0004517 // nitric-oxide synthase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0010181 // FMN binding // inferred from electronic annotation /// 0010181 // FMN binding // non-traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0020037 // heme binding // inferred from direct assay /// 0020037 // heme binding // inferred from electronic annotation /// 0034617 // tetrahydrobiopterin binding // inferred from direct assay /// 0034618 // arginine binding // inferred from direct assay /// 0046870 // cadmium ion binding // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // non-traceable author statement /// 0050661 // NADP binding // inferred from electronic annotation /// 0050661 // NADP binding // non-traceable author statement","chr7:150709296-150721586 (-) // 98.67 // q36.1"]
["11721178_a_at",0.24956322,0.076909065,-0.076909065,0.24687767,-0.1457243,-0.13364887,0.8237327,0.58770853,1.0673398,0.09401952,1.0673398,"up","PITX1",5307,"0001501 // skeletal system development // traceable author statement /// 0001501 // skeletal system development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0014707 // branchiomeric skeletal muscle development // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0035137 // hindlimb morphogenesis // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048625 // myoblast cell fate commitment // inferred from electronic annotation /// 0051216 // cartilage development // inferred from electronic annotation /// 2001141 // regulation of RNA biosynthetic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000988 // protein binding transcription factor activity // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr5:134363423-134369988 (-) // 79.41 // q31.1"]
["11725063_a_at",0.13631439,-0.00024032593,-0.07287979,0.09300041,0.00024032593,-0.02347374,0.9919012,0.9768204,-1.0015198,-0.0021909424,1.0015198,"down","CNOT10",25904,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement","0005829 // cytosol // traceable author statement","","chr3:32726636-32815365 (+) // 97.83 // p22.3"]
["11732195_at",0.21267033,-0.032790184,0.032790184,0.21800518,-0.36406326,-0.27158737,0.6572534,0.34176645,1.1567726,0.2101053,1.1567726,"up","KPNA4",3840,"0006606 // protein import into nucleus // inferred from electronic annotation /// 0006607 // NLS-bearing substrate import into nucleus // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0008565 // protein transporter activity // inferred from electronic annotation","chr3:160217420-160283376 (-) // 97.08 // q25.33"]
["11736510_a_at",-0.013100624,0.017973423,0.013100624,-0.13956022,-0.014036655,0.091269016,0.88669825,0.7116005,1.0187267,0.026767071,1.0187267,"up","IL6R",3570,"0002384 // hepatic immune response // traceable author statement /// 0002446 // neutrophil mediated immunity // inferred by curator /// 0002548 // monocyte chemotaxis // inferred by curator /// 0002690 // positive regulation of leukocyte chemotaxis // inferred by curator /// 0002690 // positive regulation of leukocyte chemotaxis // traceable author statement /// 0006953 // acute-phase response // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0010332 // response to gamma radiation // inferred from electronic annotation /// 0010536 // positive regulation of activation of Janus kinase activity // inferred from direct assay /// 0016049 // cell growth // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from direct assay /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0031018 // endocrine pancreas development // inferred by curator /// 0031018 // endocrine pancreas development // inferred from mutant phenotype /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032717 // negative regulation of interleukin-8 production // inferred from expression pattern /// 0032722 // positive regulation of chemokine production // inferred from direct assay /// 0032755 // positive regulation of interleukin-6 production // inferred from direct assay /// 0032966 // negative regulation of collagen biosynthetic process // inferred from direct assay /// 0034097 // response to cytokine stimulus // inferred from direct assay /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from mutant phenotype /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043410 // positive regulation of MAPK cascade // inferred from direct assay /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // traceable author statement /// 0045768 // positive regulation of anti-apoptosis // inferred from mutant phenotype /// 0046427 // positive regulation of JAK-STAT cascade // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from direct assay /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0050829 // defense response to Gram-negative bacterium // inferred from expression pattern /// 0050830 // defense response to Gram-positive bacterium // inferred from expression pattern /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation /// 0070102 // interleukin-6-mediated signaling pathway // inferred from direct assay /// 0070102 // interleukin-6-mediated signaling pathway // inferred from mutant phenotype /// 0070102 // interleukin-6-mediated signaling pathway // inferred from electronic annotation /// 0070120 // ciliary neurotrophic factor-mediated signaling pathway // inferred from mutant phenotype","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005896 // interleukin-6 receptor complex // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from direct assay","0004872 // receptor activity // inferred from electronic annotation /// 0004896 // cytokine receptor activity // inferred from electronic annotation /// 0004897 // ciliary neurotrophic factor receptor activity // inferred from mutant phenotype /// 0004915 // interleukin-6 receptor activity // inferred from direct assay /// 0004915 // interleukin-6 receptor activity // inferred from electronic annotation /// 0005138 // interleukin-6 receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0019981 // interleukin-6 binding // inferred from physical interaction /// 0019981 // interleukin-6 binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0070119 // ciliary neurotrophic factor binding // inferred from physical interaction","chr1:154377625-154440805 (+) // 89.7 // q21.3"]
["11727773_at",0.0131549835,0.032277107,0.068273544,-0.11013889,-0.0131549835,-0.027428627,0.2860234,0.061888184,1.0630008,0.08814268,1.0630008,"up","LARP6",55323,"0006396 // RNA processing // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr15:71143765-71146498 (-) // 54.42 // q23"]
["11762527_at",-0.3975649,-0.014708996,-0.13425207,0.014708996,0.07115078,0.12124014,0.3613638,0.098708704,-1.1902038,-0.2512086,1.1902038,"down","LINC00315",246704,"","","","chr21:46720159-46725172 (-) // 83.93 // q22.3"]
["11730559_a_at",-0.12089968,-0.04370308,-0.123827934,0.0685401,0.059583664,0.04370308,0.08246701,0.0048770425,-1.1122023,-0.15341921,1.1122023,"down","BCO2",83875,"0016116 // carotenoid metabolic process // inferred from sequence or structural similarity /// 0016119 // carotene metabolic process // inferred from direct assay /// 0016119 // carotene metabolic process // inferred from electronic annotation /// 0016121 // carotene catabolic process // inferred from direct assay /// 0042573 // retinoic acid metabolic process // non-traceable author statement /// 0042574 // retinal metabolic process // non-traceable author statement /// 0051881 // regulation of mitochondrial membrane potential // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 2000377 // regulation of reactive oxygen species metabolic process // inferred from sequence or structural similarity","0005622 // intracellular // inferred by curator /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // traceable author statement","0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from direct assay /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:112046478-112089647 (+) // 88.66 // q23.1"]
["11752773_a_at",-0.2606783,-0.2358551,-0.064080715,0.064080715,0.11782932,0.1695714,0.12419398,0.011580878,-1.2345898,-0.3040318,1.2345898,"down","PAX4",5078,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0009887 // organ morphogenesis // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031018 // endocrine pancreas development // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr7:127250990-127255724 (-) // 96.93 // q32.1"]
["11740322_at",-0.6429405,0.03319645,-0.015662193,0.024252892,-0.12374544,0.015662193,0.7468553,0.46345654,-1.1332965,-0.18052535,1.1332965,"down","KLK3",354,"0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // non-traceable author statement /// 0016525 // negative regulation of angiogenesis // non-traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // traceable author statement /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr19:51358193-51363386 (+) // 68.45 // q13.33"]
["11741629_a_at",0.14772415,-0.030298233,-0.046767235,0.14653206,-0.002380371,0.002380371,0.91132826,0.7653165,-1.017685,-0.025291158,1.017685,"down","POLR3H",171568,"0006139 // nucleobase-containing compound metabolic process // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006383 // transcription from RNA polymerase III promoter // inferred from direct assay /// 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0006385 // transcription elongation from RNA polymerase III promoter // traceable author statement /// 0006386 // termination of RNA polymerase III transcription // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005666 // DNA-directed RNA polymerase III complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // inferred from direct assay /// 0003899 // DNA-directed RNA polymerase activity // inferred from electronic annotation","chr22:41921807-41940479 (-) // 97.91 // q13.2"]
["11731019_x_at",-0.13903666,-0.01520586,-0.005788803,0.005788803,0.09054518,0.06372404,0.36038178,0.09826806,-1.0767598,-0.10669647,1.0767598,"down","AIF1",199,"0001774 // microglial cell activation // non-traceable author statement /// 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0006911 // phagocytosis, engulfment // inferred from sequence or structural similarity /// 0006911 // phagocytosis, engulfment // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from sequence or structural similarity /// 0006954 // inflammatory response // non-traceable author statement /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0014739 // positive regulation of muscle hyperplasia // inferred from electronic annotation /// 0016601 // Rac protein signal transduction // inferred from sequence or structural similarity /// 0016601 // Rac protein signal transduction // inferred from electronic annotation /// 0030041 // actin filament polymerization // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031668 // cellular response to extracellular stimulus // inferred from electronic annotation /// 0032870 // cellular response to hormone stimulus // inferred from electronic annotation /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0042102 // positive regulation of T cell proliferation // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from direct assay /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0048662 // negative regulation of smooth muscle cell proliferation // inferred from direct assay /// 0048678 // response to axon injury // inferred from electronic annotation /// 0051017 // actin filament bundle assembly // inferred from direct assay /// 0051017 // actin filament bundle assembly // inferred from electronic annotation /// 0051602 // response to electrical stimulus // inferred from electronic annotation /// 0070887 // cellular response to chemical stimulus // inferred from electronic annotation /// 0071346 // cellular response to interferon-gamma // inferred from expression pattern /// 0071346 // cellular response to interferon-gamma // inferred from sequence or structural similarity /// 0071672 // negative regulation of smooth muscle cell chemotaxis // inferred from direct assay /// 0071673 // positive regulation of smooth muscle cell chemotaxis // inferred from direct assay /// 0090026 // positive regulation of monocyte chemotaxis // inferred from direct assay /// 0097178 // ruffle assembly // inferred from sequence or structural similarity /// 0097178 // ruffle assembly // non-traceable author statement /// 0097178 // ruffle assembly // inferred from electronic annotation /// 1900087 // positive regulation of G1/S transition of mitotic cell cycle // inferred from direct assay /// 2000406 // positive regulation of T cell migration // inferred from direct assay","0001726 // ruffle // inferred from electronic annotation /// 0001891 // phagocytic cup // inferred from sequence or structural similarity /// 0001891 // phagocytic cup // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005884 // actin filament // inferred from direct assay /// 0005884 // actin filament // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from sequence or structural similarity /// 0030027 // lamellipodium // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from direct assay /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0003779 // actin binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from direct assay","chr6:31583785-31584802 (+) // 91.8 // p21.33"]
["11740957_x_at",0.26457882,0.10827732,0.015525818,-0.015525818,-0.23752785,-0.24874401,0.2505843,0.047680702,1.2283541,0.2967265,1.2283541,"up","SLC2A6",11182,"0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0015758 // glucose transport // non-traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0005355 // glucose transmembrane transporter activity // non-traceable author statement /// 0022857 // transmembrane transporter activity // inferred from electronic annotation /// 0022891 // substrate-specific transmembrane transporter activity // inferred from electronic annotation","chr9:136336216-136344276 (-) // 86.18 // q34.2"]
["11719202_a_at",0.31578827,0.04153824,0.04153824,-0.04153824,-0.16844082,-0.33022976,0.29292968,0.06482466,1.2423095,0.31302458,1.2423095,"up","MORN2",729967,"","","","chr2:39103102-39109848 (+) // 97.38 // p22.1"]
["11725936_a_at",-0.25905132,0.070739746,-0.070739746,-0.2679782,0.19307709,0.3632388,0.7285796,0.436695,-1.1348196,-0.182463,1.1348196,"down","CAMK2A",815,"0000082 // G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0046928 // regulation of neurotransmitter secretion // inferred from electronic annotation /// 0048168 // regulation of neuronal synaptic plasticity // inferred from electronic annotation /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement","0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005954 // calcium- and calmodulin-dependent protein kinase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004683 // calmodulin-dependent protein kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0035254 // glutamate receptor binding // inferred from electronic annotation","chr5:149598961-149669403 (-) // 93.98 // q32"]
["11731621_at",-0.10658121,-0.04871559,-0.07798529,0.17680883,0.29033184,0.04871559,0.18299097,0.025358299,-1.1889703,-0.2497127,1.1889703,"down","ZNF91",7644,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:23540498-23578362 (-) // 90.9 // p12"]
["11721382_at",-0.18936586,0.14195871,0.099423885,0.0797143,-0.19207764,-0.0797143,0.8113777,0.5669706,1.0580184,0.08136478,1.0580184,"up","ATG2B",55102,"","","","chr14:96747594-96829701 (-) // 99.76 // q32.2"]
["11762724_at",0.010285616,0.4067347,-0.010285616,0.29465985,-0.12108469,-0.16588998,0.7970712,0.5419718,1.0965841,0.13301644,1.0965841,"up","PCDP1",200373,"","0005929 // cilium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005516 // calmodulin binding // inferred from electronic annotation","chr2:120302060-120331046 (+) // 99.93 // q14.2"]
["11717006_a_at",-0.09992981,-0.23592234,-0.0800724,0.12408209,0.0800724,0.085513115,0.11544599,0.0098742265,-1.1770678,-0.23519737,1.1770678,"down","POLDIP3",84271,"0006417 // regulation of translation // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0035145 // exon-exon junction complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr22:42979726-43010924 (-) // 92.82 // q13.2"]
["11722006_a_at",-0.029697895,-0.0040688515,0.0040688515,-0.29841566,0.08858633,0.108469486,0.9518547,0.866025,1.0166953,0.023887318,1.0166953,"up","KLHL25",64410,"","0005737 // cytoplasm // inferred from direct assay","","chr15:86302556-86338261 (-) // 99.5 // q25.3"]
["11725083_s_at",0.6627493,0.24968243,0.14387512,-0.14387512,-0.2636776,-0.3210745,0.17607495,0.023385707,1.5104496,0.5949781,1.5104496,"up","HDAC6",10013,"0000209 // protein polyubiquitination // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006476 // protein deacetylation // inferred from mutant phenotype /// 0006476 // protein deacetylation // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006515 // misfolded or incompletely synthesized protein catabolic process // inferred from mutant phenotype /// 0006886 // intracellular protein transport // inferred from mutant phenotype /// 0006914 // autophagy // inferred from electronic annotation /// 0007026 // negative regulation of microtubule depolymerization // inferred from electronic annotation /// 0009636 // response to toxin // inferred from mutant phenotype /// 0009967 // positive regulation of signal transduction // inferred from mutant phenotype /// 0010033 // response to organic substance // inferred from mutant phenotype /// 0010469 // regulation of receptor activity // inferred from mutant phenotype /// 0010634 // positive regulation of epithelial cell migration // inferred from mutant phenotype /// 0010727 // negative regulation of hydrogen peroxide metabolic process // inferred by curator /// 0010870 // positive regulation of receptor biosynthetic process // inferred from mutant phenotype /// 0016236 // macroautophagy // inferred from mutant phenotype /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016575 // histone deacetylation // inferred from direct assay /// 0016575 // histone deacetylation // inferred from sequence or structural similarity /// 0016575 // histone deacetylation // inferred from electronic annotation /// 0032418 // lysosome localization // inferred from mutant phenotype /// 0034983 // peptidyl-lysine deacetylation // inferred from mutant phenotype /// 0035967 // cellular response to topologically incorrect protein // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043162 // ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway // inferred from electronic annotation /// 0043242 // negative regulation of protein complex disassembly // inferred from mutant phenotype /// 0045861 // negative regulation of proteolysis // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0051354 // negative regulation of oxidoreductase activity // inferred by curator /// 0051788 // response to misfolded protein // inferred from mutant phenotype /// 0060632 // regulation of microtubule-based movement // inferred by curator /// 0060765 // regulation of androgen receptor signaling pathway // traceable author statement /// 0070301 // cellular response to hydrogen peroxide // inferred from mutant phenotype /// 0070842 // aggresome assembly // inferred from mutant phenotype /// 0070842 // aggresome assembly // inferred from electronic annotation /// 0070845 // polyubiquitinated misfolded protein transport // inferred from mutant phenotype /// 0070846 // Hsp90 deacetylation // inferred from mutant phenotype /// 0070846 // Hsp90 deacetylation // inferred from electronic annotation /// 0070848 // response to growth factor stimulus // inferred from mutant phenotype /// 0071218 // cellular response to misfolded protein // inferred from electronic annotation /// 0090035 // positive regulation of chaperone-mediated protein complex assembly // inferred from mutant phenotype /// 0090042 // tubulin deacetylation // inferred from direct assay /// 0090042 // tubulin deacetylation // inferred from sequence or structural similarity /// 0090042 // tubulin deacetylation // inferred from electronic annotation","0000118 // histone deacetylase complex // inferred from direct assay /// 0005622 // intracellular // inferred from mutant phenotype /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005875 // microtubule associated complex // inferred from direct assay /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation /// 0005901 // caveola // inferred from direct assay /// 0016234 // inclusion body // inferred from direct assay /// 0016235 // aggresome // inferred from direct assay /// 0030286 // dynein complex // inferred from direct assay /// 0031252 // cell leading edge // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0003779 // actin binding // inferred from electronic annotation /// 0004407 // histone deacetylase activity // inferred from direct assay /// 0004407 // histone deacetylase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from direct assay /// 0008017 // microtubule binding // inferred from sequence or structural similarity /// 0008017 // microtubule binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from sequence or structural similarity /// 0031078 // histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0031593 // polyubiquitin binding // inferred from direct assay /// 0032041 // NAD-dependent histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0032129 // histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0034739 // histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0042903 // tubulin deacetylase activity // inferred from direct assay /// 0042903 // tubulin deacetylase activity // inferred from sequence or structural similarity /// 0042903 // tubulin deacetylase activity // inferred from electronic annotation /// 0043014 // alpha-tubulin binding // inferred from direct assay /// 0043130 // ubiquitin binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046969 // NAD-dependent histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0046970 // NAD-dependent histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation /// 0048156 // tau protein binding // inferred from direct assay /// 0048487 // beta-tubulin binding // inferred from electronic annotation /// 0051879 // Hsp90 protein binding // inferred from direct assay /// 0070840 // dynein complex binding // inferred from direct assay","chrX:48660106-48683380 (+) // 96.69 // p11.23"]
["11763782_a_at",-0.13768339,0.1356616,0.040504932,-0.22381592,-0.040504932,0.12841368,0.8704728,0.6766937,1.0411155,0.05813016,1.0411155,"up","TTC5",91875,"0006281 // DNA repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","","chr14:20757687-20774119 (-) // 97.02 // q11.2"]
["11738851_a_at",-0.074406385,0.26329398,-0.02017951,-0.052656412,0.02017951,0.2344482,0.9786019,0.9387604,-1.007715,-0.011087657,1.007715,"down","MMP16",4325,"0006508 // proteolysis // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030574 // collagen catabolic process // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005796 // Golgi lumen // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008047 // enzyme activator activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:89086832-89339717 (-) // 81.27 // q21.3"]
["11763387_s_at",0.056207657,0.14213085,0.0836153,-0.056207657,-0.09083271,-0.11925793,0.07760965,0.0042477367,1.135046,0.18275078,1.135046,"up","CDK8",1024,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007219 // Notch signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016592 // mediator complex // inferred from direct assay /// 0016592 // mediator complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004693 // cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008353 // RNA polymerase II carboxy-terminal domain kinase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr13:26978833-26979372 (+) // 98.18 // q12.13"]
["11755474_a_at",0.0774622,0.0488348,-0.10543728,0.044718742,-0.044718742,-0.11733723,0.8109385,0.5655185,1.0324455,0.046065696,1.0324455,"up","ADAM15",8751,"0001525 // angiogenesis // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // traceable author statement /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0030574 // collagen catabolic process // inferred from electronic annotation /// 0042246 // tissue regeneration // inferred from electronic annotation /// 0060317 // cardiac epithelial to mesenchymal transition // inferred from electronic annotation","0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019861 // flagellum // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from direct assay /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:155023791-155035245 (+) // 99.48 // q22"]
["11744672_a_at",0.2013979,0.060370445,-0.018324375,0.018324375,-0.06412363,-0.30330896,0.46392286,0.16356345,1.1467234,0.19751742,1.1467234,"up","MORN4",118812,"","","","chr10:99379152-99393557 (-) // 97.89 // q24.2"]
["11747922_a_at",0.089904785,0.053527832,-0.023329735,0.0041770935,-0.0041770935,-0.012788773,0.57909834,0.25940612,1.0311807,0.044297222,1.0311807,"up","RBFOX2",23543,"0000381 // regulation of alternative nuclear mRNA splicing, via spliceosome // inferred from sequence or structural similarity /// 0000381 // regulation of alternative nuclear mRNA splicing, via spliceosome // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010724 // regulation of definitive erythrocyte differentiation // inferred from electronic annotation /// 0016070 // RNA metabolic process // traceable author statement /// 0030520 // intracellular estrogen receptor signaling pathway // inferred from direct assay /// 0042127 // regulation of cell proliferation // traceable author statement /// 0043484 // regulation of RNA splicing // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from direct assay","chr22:36140234-36236460 (-) // 86.22 // q12.3"]
["11729295_at",0.19988823,0.16897392,0.11586094,-0.18085861,-0.16549969,-0.11586046,0.032591347,0.00055161485,1.2445699,0.31564724,1.2445699,"up","TMCO7",79613,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr16:68877449-69119315 (+) // 99.69 // q22.1"]
["11716768_a_at",0.000579834,-0.3155365,-0.22456074,0.3556614,0.18266487,-0.000579834,0.28496927,0.061476517,-1.2826148,-0.35908797,1.2826148,"down","UBQLN2",29978,"0008219 // cell death // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chrX:56590062-56593494 (+) // 92.18 // p11.21"]
["11744546_a_at",-0.19095182,-0.036676884,-0.0244174,0.0244174,0.13740444,0.21684694,0.26492816,0.053162627,-1.1568793,-0.21023835,1.1568793,"down","PROZ",8858,"0006508 // proteolysis // traceable author statement /// 0007596 // blood coagulation // inferred from electronic annotation /// 0007599 // hemostasis // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0017187 // peptidyl-glutamic acid carboxylation // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005796 // Golgi lumen // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation","chr13:113812967-113826697 (+) // 98.48 // q34"]
["11717933_a_at",0.04046011,0.015745163,0.24356031,-0.13228273,-0.04804516,-0.015745163,0.37816402,0.10802499,1.1213833,0.1652795,1.1213833,"up","DNAL4",10126,"0007017 // microtubule-based process // inferred from electronic annotation /// 0007018 // microtubule-based movement // non-traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005858 // axonemal dynein complex // non-traceable author statement /// 0005874 // microtubule // inferred from electronic annotation /// 0005875 // microtubule associated complex // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005929 // cilium // inferred from electronic annotation /// 0030286 // dynein complex // inferred from electronic annotation /// 0035085 // cilium axoneme // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0003774 // motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // non-traceable author statement /// 0042623 // ATPase activity, coupled // non-traceable author statement","chr22:39174512-39190178 (-) // 97.79 // q13.1"]
["11720420_at",0.11712599,0.02052784,0.022771835,-0.22958088,-0.02114153,-0.02052784,0.41990092,0.13320363,1.1048818,0.14389199,1.1048818,"up","AFF4",27125,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007286 // spermatid development // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay","0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr5:132211075-132299354 (-) // 98.62 // q31.1"]
["11755888_a_at",0.09647608,0.20714569,0.028710842,-0.028710842,-0.22173119,-0.20536089,0.2032644,0.03129107,1.1997317,0.26271182,1.1997317,"up","RGN",9104,"0006874 // cellular calcium ion homeostasis // inferred from sequence or structural similarity /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0032781 // positive regulation of ATPase activity // inferred from sequence or structural similarity /// 0032781 // positive regulation of ATPase activity // inferred from electronic annotation /// 0050848 // regulation of calcium-mediated signaling // inferred from sequence or structural similarity /// 0050848 // regulation of calcium-mediated signaling // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation","0004341 // gluconolactonase activity // inferred from direct assay /// 0004341 // gluconolactonase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0008270 // zinc ion binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030234 // enzyme regulator activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:46937816-46952712 (+) // 97.15 // p11.23"]
["11740463_at",0.035381317,0.066604614,0.009321213,-0.5253587,-0.009321213,-0.2722659,0.38312152,0.11069046,1.2363476,0.30608436,1.2363476,"up","SYCE1L",100130958,"0007126 // meiosis // inferred from electronic annotation","","","chr16:77233293-77246955 (+) // 95.34 // q23.1"]
["11757352_a_at",0.07969761,0.07585049,-0.07398701,0.046185493,-0.04618597,-0.13310766,0.68579453,0.37885806,1.0508498,0.07155647,1.0508498,"up","TRMT1",55621,"0008033 // tRNA processing // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation","","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004809 // tRNA (guanine-N2-)-methyltransferase activity // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:13215720-13227573 (-) // 97.78 // p13.2"]
["11717596_s_at",0.16167259,0.03144741,-0.003414154,0.0034151077,-0.18795586,-0.08564472,0.3804957,0.109430544,1.1121081,0.15329704,1.1121081,"up","GNAS",2778,"0001501 // skeletal system development // inferred from electronic annotation /// 0001894 // tissue homeostasis // inferred from electronic annotation /// 0001958 // endochondral ossification // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006171 // cAMP biosynthetic process // traceable author statement /// 0006184 // GTP catabolic process // not recorded /// 0006184 // GTP catabolic process // traceable author statement /// 0006184 // GTP catabolic process // non-traceable author statement /// 0006306 // DNA methylation // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway // non-traceable author statement /// 0007190 // activation of adenylate cyclase activity // traceable author statement /// 0007191 // adenylate cyclase-activating dopamine receptor signaling pathway // not recorded /// 0007191 // adenylate cyclase-activating dopamine receptor signaling pathway // inferred from sequence or structural similarity /// 0007565 // female pregnancy // non-traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007606 // sensory perception of chemical stimulus // not recorded /// 0007608 // sensory perception of smell // traceable author statement /// 0007610 // behavior // inferred from electronic annotation /// 0009306 // protein secretion // non-traceable author statement /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0040032 // post-embryonic body morphogenesis // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043588 // skin development // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045669 // positive regulation of osteoblast differentiation // inferred from electronic annotation /// 0045672 // positive regulation of osteoclast differentiation // inferred from electronic annotation /// 0046907 // intracellular transport // non-traceable author statement /// 0048701 // embryonic cranial skeleton morphogenesis // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // traceable author statement /// 0051216 // cartilage development // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0071377 // cellular response to glucagon stimulus // traceable author statement /// 0071380 // cellular response to prostaglandin E stimulus // inferred from sequence or structural similarity /// 0071514 // genetic imprinting // inferred from electronic annotation /// 0071870 // cellular response to catecholamine stimulus // inferred from sequence or structural similarity","0001726 // ruffle // inferred from electronic annotation /// 0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005622 // intracellular // non-traceable author statement /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005834 // heterotrimeric G-protein complex // not recorded /// 0005834 // heterotrimeric G-protein complex // inferred from sequence or structural similarity /// 0005834 // heterotrimeric G-protein complex // traceable author statement /// 0005834 // heterotrimeric G-protein complex // non-traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from electronic annotation /// 0031224 // intrinsic to membrane // inferred from direct assay /// 0031234 // extrinsic to internal side of plasma membrane // not recorded /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032588 // trans-Golgi network membrane // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // not recorded /// 0003924 // GTPase activity // traceable author statement /// 0003924 // GTPase activity // non-traceable author statement /// 0004016 // adenylate cyclase activity // traceable author statement /// 0004871 // signal transducer activity // not recorded /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0005525 // GTP binding // non-traceable author statement /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // not recorded /// 0031852 // mu-type opioid receptor binding // not recorded /// 0035255 // ionotropic glutamate receptor binding // not recorded /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:57427784-57486247 (+) // 97.48 // q13.32"]
["11715587_at",0.15270996,0.16306496,0.1263237,-0.17886162,-0.20071507,-0.12632275,0.023337826,0.0002129841,1.2448736,0.3159993,1.2448736,"up","MAPRE1",22919,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0031115 // negative regulation of microtubule polymerization // inferred from direct assay /// 0035372 // protein localization to microtubule // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation /// 0030981 // cortical microtubule cytoskeleton // inferred from direct assay /// 0031253 // cell projection membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // traceable author statement /// 0051010 // microtubule plus-end binding // inferred from direct assay /// 0051010 // microtubule plus-end binding // inferred from electronic annotation","chr20:31407696-31438163 (+) // 90.39 // q11.21"]
["11755189_a_at",-0.14970589,0.0049209595,0.19890118,-0.073272705,0.042165756,-0.0049209595,0.92196363,0.79139566,1.0210462,0.030048091,1.0210462,"up","TMEM175",84286,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr4:926265-952438 (+) // 96.82 // p16.3"]
["11747124_at",-0.07427454,-0.051051617,0.11131239,-0.2009654,0.051051617,0.08685875,0.96010447,0.88675755,1.0113953,0.01634703,1.0113953,"up","LOC100293612",100293612,"","","","chr3:13688451-13696011 (-) // 52.69 // p25.1"]
["11716920_at",-0.08133364,0.10745144,-0.29367924,-0.08958149,0.20498991,0.08133364,0.65805435,0.34279212,-1.1132425,-0.1547679,1.1132425,"down","PLVAP",83483,"","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005901 // caveola // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0042803 // protein homodimerization activity // inferred from electronic annotation","chr19:17462257-17488160 (-) // 97.09 // p13.11"]
["11758559_s_at",-0.20280075,-0.03761244,0.03761244,-0.101765156,0.05687332,0.07292938,0.7325276,0.44203767,-1.0547829,-0.07694604,1.0547829,"down","NUDT4 /// NUDT4P1","11163 /// 440672","0009187 // cyclic nucleotide metabolic process // traceable author statement /// 0019722 // calcium-mediated signaling // traceable author statement /// 0019935 // cyclic-nucleotide-mediated signaling // traceable author statement /// 0035556 // intracellular signal transduction // non-traceable author statement /// 0046831 // regulation of RNA export from nucleus // traceable author statement /// 0046907 // intracellular transport // traceable author statement","0005622 // intracellular // non-traceable author statement /// 0005622 // intracellular // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0008486 // diphosphoinositol-polyphosphate diphosphatase activity // inferred from direct assay /// 0008486 // diphosphoinositol-polyphosphate diphosphatase activity // inferred from electronic annotation /// 0008486 // diphosphoinositol-polyphosphate diphosphatase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0052840 // inositol diphosphate tetrakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052841 // inositol bisdiphosphate tetrakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052842 // inositol diphosphate pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052843 // inositol-1-diphosphate-2,3,4,5,6-pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052844 // inositol-3-diphosphate-1,2,4,5,6-pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052845 // inositol-5-diphosphate-1,2,3,4,6-pentakisphosphate diphosphatase activity // inferred from electronic annotation /// 0052846 // inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 1-diphosphatase activity // inferred from electronic annotation /// 0052847 // inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity // inferred from electronic annotation /// 0052848 // inositol-3,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity // inferred from electronic annotation","chr12:93793475-93793896 (+) // 99.76 // q22 /// chr1:145138283-145138704 (-) // 100.0 // q21.1"]
["11742977_a_at",-0.11801195,0.28736734,0.042480946,-0.3745942,-0.042480946,0.13144922,0.72439873,0.43104783,1.1218041,0.16582078,1.1218041,"up","GNAO1",2775,"0006184 // GTP catabolic process // not recorded /// 0006184 // GTP catabolic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // not recorded /// 0007212 // dopamine receptor signaling pathway // not recorded /// 0007212 // dopamine receptor signaling pathway // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0008016 // regulation of heart contraction // inferred from electronic annotation /// 0009987 // cellular process // inferred from electronic annotation /// 0010243 // response to organic nitrogen // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0043278 // response to morphine // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051926 // negative regulation of calcium ion transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005834 // heterotrimeric G-protein complex // not recorded /// 0005886 // plasma membrane // traceable author statement /// 0019717 // synaptosome // inferred from electronic annotation /// 0031234 // extrinsic to internal side of plasma membrane // not recorded /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // not recorded /// 0003924 // GTPase activity // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0004871 // signal transducer activity // not recorded /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // not recorded /// 0031821 // G-protein coupled serotonin receptor binding // not recorded /// 0031821 // G-protein coupled serotonin receptor binding // inferred from electronic annotation /// 0031852 // mu-type opioid receptor binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:56225250-56391355 (+) // 93.09 // q12.2"]
["11750955_a_at",0.13200521,-0.06645322,0.008874655,0.23049998,-0.020856142,-0.008874655,0.87970006,0.69595873,-1.0296216,-0.042114224,1.0296216,"down","GABRR1",2569,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from electronic annotation /// 0007214 // gamma-aminobutyric acid signaling pathway // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0034220 // ion transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0034707 // chloride channel complex // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004890 // GABA-A receptor activity // inferred from electronic annotation /// 0004890 // GABA-A receptor activity // traceable author statement /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from electronic annotation /// 0016917 // GABA receptor activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr6:89888317-89931166 (-) // 92.72 // q15"]
["11756544_a_at",0.1491909,-0.08088207,-0.0023703575,0.048663616,0.0023698807,-0.03485918,0.93785065,0.82842696,1.0115644,0.016588133,1.0115644,"up","C22orf29",79680,"","","","chr22:19833670-19842386 (-) // 45.85 // q11.21"]
["11717607_at",-0.4868431,0.23031569,-0.05210018,-0.39909744,0.05210018,0.13446522,0.9677416,0.9101149,-1.022451,-0.032031767,1.022451,"down","VMA21",203547,"0070072 // vacuolar proton-transporting V-type ATPase complex assembly // inferred from direct assay","0005764 // lysosome // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0012507 // ER to Golgi transport vesicle membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030127 // COPII vesicle coat // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation","","chrX:150565675-150577836 (+) // 74.51 // q28"]
["11726359_a_at",-0.056344032,-0.100925446,-0.14096355,0.2350893,0.056344032,0.10265732,0.15073258,0.017247505,-1.1734648,-0.23077454,1.1734648,"down","MLL5",55904,"0002446 // neutrophil mediated immunity // inferred from sequence or structural similarity /// 0002446 // neutrophil mediated immunity // inferred from electronic annotation /// 0006306 // DNA methylation // inferred from sequence or structural similarity /// 0006306 // DNA methylation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030218 // erythrocyte differentiation // inferred from sequence or structural similarity /// 0030218 // erythrocyte differentiation // inferred from electronic annotation /// 0030854 // positive regulation of granulocyte differentiation // inferred from mutant phenotype /// 0032259 // methylation // inferred from electronic annotation /// 0034968 // histone lysine methylation // inferred from electronic annotation /// 0042119 // neutrophil activation // inferred from sequence or structural similarity /// 0042119 // neutrophil activation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0048384 // retinoic acid receptor signaling pathway // inferred from mutant phenotype /// 0051568 // histone H3-K4 methylation // inferred from direct assay /// 0071300 // cellular response to retinoic acid // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation /// 0070688 // MLL5-L complex // inferred from direct assay","0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0004308 // exo-alpha-sialidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0052794 // exo-alpha-(2->3)-sialidase activity // inferred from electronic annotation /// 0052795 // exo-alpha-(2->6)-sialidase activity // inferred from electronic annotation /// 0052796 // exo-alpha-(2->8)-sialidase activity // inferred from electronic annotation","chr7:104654630-104754808 (+) // 99.4 // q22.3"]
["11736973_a_at",0.010903358,-0.08368254,-0.010903358,-0.27742696,0.09618521,0.05751419,0.9711366,0.9181558,1.0092953,0.013348403,1.0092953,"up","TBX5",6910,"0002009 // morphogenesis of an epithelium // inferred from electronic annotation /// 0003166 // bundle of His development // inferred from electronic annotation /// 0003181 // atrioventricular valve morphogenesis // inferred from electronic annotation /// 0003197 // endocardial cushion development // inferred from electronic annotation /// 0003218 // cardiac left ventricle formation // inferred from sequence or structural similarity /// 0003218 // cardiac left ventricle formation // inferred from electronic annotation /// 0003229 // ventricular cardiac muscle tissue development // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from sequence or structural similarity /// 0003281 // ventricular septum development // inferred from electronic annotation /// 0003283 // atrial septum development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006917 // induction of apoptosis // inferred from direct assay /// 0007267 // cell-cell signaling // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0007507 // heart development // inferred from direct assay /// 0007507 // heart development // inferred from mutant phenotype /// 0007507 // heart development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0010467 // gene expression // traceable author statement /// 0010719 // negative regulation of epithelial to mesenchymal transition // traceable author statement /// 0030324 // lung development // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from mutant phenotype /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from direct assay /// 0035115 // embryonic forelimb morphogenesis // inferred from electronic annotation /// 0035117 // embryonic arm morphogenesis // inferred from mutant phenotype /// 0035136 // forelimb morphogenesis // inferred from mutant phenotype /// 0035136 // forelimb morphogenesis // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051891 // positive regulation of cardioblast differentiation // inferred from direct assay /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0060039 // pericardium development // inferred from direct assay /// 0060044 // negative regulation of cardiac muscle cell proliferation // inferred from direct assay /// 0060045 // positive regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0060980 // cell migration involved in coronary vasculogenesis // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement","0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay","chr12:114791735-114846519 (-) // 93.28 // q24.21"]
["11727085_s_at",-0.015175343,-0.18097162,0.3866074,0.015175104,0.08078718,-0.19573903,0.84886336,0.6339905,1.0693586,0.09674571,1.0693586,"up","GJB2",2706,"0006810 // transport // traceable author statement /// 0007154 // cell communication // inferred from electronic annotation /// 0007267 // cell-cell signaling // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0007605 // sensory perception of sound // traceable author statement /// 0016044 // cellular membrane organization // traceable author statement /// 0016264 // gap junction assembly // traceable author statement /// 0030539 // male genitalia development // inferred from electronic annotation","0005793 // endoplasmic reticulum-Golgi intermediate compartment // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005921 // gap junction // inferred from electronic annotation /// 0005922 // connexon complex // inferred from electronic annotation /// 0005922 // connexon complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016328 // lateral plasma membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005243 // gap junction channel activity // inferred from electronic annotation","chr13:20761605-20767149 (-) // 98.03 // q12.11"]
["11740935_s_at",-0.019348145,0.074962616,0.11115265,-0.35819244,-0.04002571,0.019348145,0.5297571,0.21480969,1.1343604,0.18187912,1.1343604,"up","BANP",54971,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0034504 // protein localization to nucleus // inferred from electronic annotation /// 0042177 // negative regulation of protein catabolic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0002039 // p53 binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation","chr16:87985037-88110923 (+) // 96.6 // q24.2"]
["11732667_x_at",-0.27391362,0.061751127,-0.02141285,-0.15335202,0.021413088,0.046678543,0.8809309,0.698934,-1.0348619,-0.049438287,1.0348619,"down","RSPH10B /// RSPH10B2","222967 /// 728194","0016310 // phosphorylation // inferred from electronic annotation","","0016301 // kinase activity // inferred from electronic annotation","chr7:6793739-6838392 (+) // 93.15 // p22.1 /// chr7:5965780-6010314 (-) // 93.15 // p22.1"]
["11743979_a_at",0.04469204,-7.43866e-5,-0.041481018,7.343292e-5,-0.03353119,0.015011787,0.93163294,0.81458235,1.004999,0.0071941256,1.004999,"up","UQCRC1",7384,"0006119 // oxidative phosphorylation // traceable author statement /// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0009060 // aerobic respiration // traceable author statement /// 0014823 // response to activity // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0043279 // response to alkaloid // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // traceable author statement","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005746 // mitochondrial respiratory chain // traceable author statement /// 0005750 // mitochondrial respiratory chain complex III // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0008121 // ubiquinol-cytochrome-c reductase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:48636434-48647664 (-) // 44.59 // p21.31"]
["11748388_a_at",0.16220713,0.048862457,-0.06829834,0.04564953,-0.39721584,-0.045650005,0.6176815,0.29778397,1.1328807,0.17999592,1.1328807,"up","GLYR1",84656,"0006098 // pentose-phosphate shunt // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004616 // phosphogluconate dehydrogenase (decarboxylating) activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0035064 // methylated histone residue binding // inferred from direct assay /// 0050662 // coenzyme binding // inferred from electronic annotation","chr16:4854921-4897283 (-) // 93.58 // p13.3"]
["11731960_a_at",0.062604904,0.24520516,0,-0.084472895,0,-0.0597198,0.40593442,0.124547035,1.110083,0.15066753,1.110083,"up","LOC401052",401052,"","","","chr3:10047955-10052779 (-) // 67.42 // p25.3"]
["11719594_at",-0.021993637,0.049284935,0.0055799484,0.17679119,-0.0055799484,-0.054354668,0.891883,0.7220831,-1.0195942,-0.027995061,1.0195942,"down","GMEB2",26205,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:62218957-62251229 (-) // 93.19 // q13.33"]
["11759284_at",-0.22696066,-0.23274946,0.09189415,-0.038170815,0.038170576,0.20140457,0.52858,0.21367767,-1.1405582,-0.18974012,1.1405582,"down","HIST2H2AB",317772,"0006334 // nucleosome assembly // inferred from electronic annotation","0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr1:149859018-149859563 (-) // 100.0 // q21.2"]
["11719843_a_at",0.25263333,0.022433281,-0.0816865,-0.022433281,-0.06553626,0.09629011,0.8327103,0.6048228,1.0436851,0.06168646,1.0436851,"up","ABI3BP",25890,"0010811 // positive regulation of cell-substrate adhesion // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005614 // interstitial matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from electronic annotation","0005518 // collagen binding // inferred from electronic annotation /// 0005539 // glycosaminoglycan binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from electronic annotation","chr3:100468001-100712359 (-) // 98.29 // q12.2"]
["11723942_s_at",0.032115936,0.0123806,0.03527069,-0.11514664,-0.0123806,-0.053726196,0.2488699,0.04715403,1.0621643,0.08700696,1.0621643,"up","PTTG1IP",754,"0006606 // protein import into nucleus // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr21:46269513-46293745 (-) // 97.01 // q22.3"]
["11733305_a_at",0.13192344,0.05944419,-0.28805804,-0.05944419,-0.1475451,0.07718825,0.98038125,0.9430476,1.0076795,0.011036798,1.0076795,"up","TFAP2B",7021,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001822 // kidney development // inferred from sequence or structural similarity /// 0001822 // kidney development // inferred from electronic annotation /// 0003091 // renal water homeostasis // inferred from sequence or structural similarity /// 0003091 // renal water homeostasis // inferred from electronic annotation /// 0006006 // glucose metabolic process // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007423 // sensory organ development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0010842 // retina layer formation // inferred from expression pattern /// 0010960 // magnesium ion homeostasis // inferred from sequence or structural similarity /// 0010960 // magnesium ion homeostasis // inferred from electronic annotation /// 0030510 // regulation of BMP signaling pathway // inferred from sequence or structural similarity /// 0030510 // regulation of BMP signaling pathway // inferred from electronic annotation /// 0035136 // forelimb morphogenesis // inferred from sequence or structural similarity /// 0035136 // forelimb morphogenesis // inferred from electronic annotation /// 0035137 // hindlimb morphogenesis // inferred from sequence or structural similarity /// 0035137 // hindlimb morphogenesis // inferred from electronic annotation /// 0035810 // positive regulation of urine volume // inferred from sequence or structural similarity /// 0035810 // positive regulation of urine volume // inferred from electronic annotation /// 0035909 // aorta morphogenesis // inferred from sequence or structural similarity /// 0035909 // aorta morphogenesis // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from sequence or structural similarity /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from sequence or structural similarity /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from sequence or structural similarity /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from direct assay /// 0043588 // skin development // inferred from electronic annotation /// 0045444 // fat cell differentiation // inferred from expression pattern /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0045595 // regulation of cell differentiation // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048485 // sympathetic nervous system development // inferred from sequence or structural similarity /// 0048485 // sympathetic nervous system development // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // inferred from mutant phenotype /// 0055062 // phosphate ion homeostasis // inferred from sequence or structural similarity /// 0055062 // phosphate ion homeostasis // inferred from electronic annotation /// 0055074 // calcium ion homeostasis // inferred from sequence or structural similarity /// 0055074 // calcium ion homeostasis // inferred from electronic annotation /// 0055075 // potassium ion homeostasis // inferred from sequence or structural similarity /// 0055075 // potassium ion homeostasis // inferred from electronic annotation /// 0055078 // sodium ion homeostasis // inferred from sequence or structural similarity /// 0055078 // sodium ion homeostasis // inferred from electronic annotation /// 0072017 // distal tubule development // inferred from sequence or structural similarity /// 0072017 // distal tubule development // inferred from electronic annotation /// 0072044 // collecting duct development // inferred from sequence or structural similarity /// 0072044 // collecting duct development // inferred from electronic annotation /// 0072210 // metanephric nephron development // inferred from electronic annotation /// 0097070 // ductus arteriosus closure // inferred from sequence or structural similarity /// 0097070 // ductus arteriosus closure // inferred from electronic annotation /// 0097275 // cellular ammonia homeostasis // inferred from sequence or structural similarity /// 0097276 // cellular creatinine homeostasis // inferred from sequence or structural similarity /// 0097277 // cellular urea homeostasis // inferred from sequence or structural similarity","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from direct assay /// 0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from electronic annotation /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0000983 // RNA polymerase II core promoter sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0000983 // RNA polymerase II core promoter sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0001105 // RNA polymerase II transcription coactivator activity // inferred from sequence or structural similarity /// 0001105 // RNA polymerase II transcription coactivator activity // inferred from electronic annotation /// 0001106 // RNA polymerase II transcription corepressor activity // inferred from sequence or structural similarity /// 0001106 // RNA polymerase II transcription corepressor activity // inferred from electronic annotation /// 0001158 // enhancer sequence-specific DNA binding // inferred from direct assay /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0043027 // cysteine-type endopeptidase inhibitor activity involved in apoptotic process // inferred from sequence or structural similarity /// 0043027 // cysteine-type endopeptidase inhibitor activity involved in apoptotic process // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0046983 // protein dimerization activity // inferred from direct assay","chr6:50786377-50815340 (+) // 99.08 // p12.3"]
["11732087_a_at",0.019320488,-0.03740263,-0.06497097,-0.019320488,0.055276394,0.10539961,0.46411473,0.16371566,-1.0532172,-0.07480295,1.0532172,"down","TRIM6",117854,"0070206 // protein trimerization // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:5617342-5665623 (+) // 91.01 // p15.4"]
["11762581_a_at",0.51459885,0.123809814,0.32543802,-0.12380934,-0.3737769,-0.3934188,0.12744896,0.012218316,1.5350481,0.61828387,1.5350481,"up","NEK10",152110,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:27152394-27244048 (-) // 86.65 // p24.1"]
["11745157_a_at",-0.089118004,-0.089118004,0.27265358,0.089118004,-0.23201513,0.22284937,0.99258196,0.9800227,1.0033478,0.0048217224,1.0033478,"up","HELT",391723,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001967 // suckling behavior // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0010259 // multicellular organismal aging // inferred from electronic annotation /// 0010467 // gene expression // inferred from electronic annotation /// 0021858 // GABAergic neuron differentiation in basal ganglia // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr4:185939994-185941958 (+) // 100.0 // q35.1"]
["11759778_at",0.011410713,0.1732521,0.15317917,-0.29971647,-0.061264038,-0.011410713,0.32939374,0.082084775,1.1783307,0.23674443,1.1783307,"up","ASXL1",171023,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from sequence or structural similarity /// 0035359 // negative regulation of peroxisome proliferator activated receptor signaling pathway // inferred from sequence or structural similarity /// 0035522 // monoubiquitinated histone H2A deubiquitination // inferred from direct assay /// 0045599 // negative regulation of fat cell differentiation // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0048386 // positive regulation of retinoic acid receptor signaling pathway // inferred from sequence or structural similarity /// 0048387 // negative regulation of retinoic acid receptor signaling pathway // inferred from sequence or structural similarity","0000790 // nuclear chromatin // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0035517 // PR-DUB complex // inferred from direct assay","0003713 // transcription coactivator activity // inferred from sequence or structural similarity /// 0003714 // transcription corepressor activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0042974 // retinoic acid receptor binding // inferred from sequence or structural similarity /// 0042975 // peroxisome proliferator activated receptor binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:30946140-30960354 (+) // 72.69 // q11.21"]
["11732409_a_at",-0.001534462,0.001534462,-0.03457451,0.29372215,0.32037067,-0.17231941,0.6852764,0.378227,-1.1163448,-0.1587827,1.1163448,"down","KTN1",3895,"0007018 // microtubule-based movement // inferred from electronic annotation /// 0007018 // microtubule-based movement // non-traceable author statement /// 0015031 // protein transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // inferred from electronic annotation","0019894 // kinesin binding // inferred from electronic annotation","chr14:56046924-56151297 (+) // 98.33 // q22.3"]
["11728998_x_at",0.09135342,0.19225407,0.1624384,-0.20761776,-0.09135342,-0.2523327,0.077187344,0.0041822847,1.2591498,0.3324499,1.2591498,"up","GCNT2",2651,"0006024 // glycosaminoglycan biosynthetic process // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008109 // N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase activity // inferred from electronic annotation /// 0008109 // N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase activity // traceable author statement /// 0008375 // acetylglucosaminyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr6:10555948-10629600 (+) // 86.28 // p24.3"]
["11763444_a_at",0.020506859,-0.0028123856,-0.06720829,-0.15065765,0.03185749,0.0028123856,0.90063274,0.74045956,1.0154773,0.02215799,1.0154773,"up","SNAPC4",6621,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0009301 // snRNA transcription // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0042795 // snRNA transcription from RNA polymerase II promoter // inferred from direct assay /// 0042796 // snRNA transcription from RNA polymerase III promoter // inferred from direct assay","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0019185 // snRNA-activating protein complex // inferred from direct assay","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement","chr9:139270030-139271863 (-) // 98.11 // q34.3"]
["11739125_x_at",0.18317604,0.06889725,0.0062179565,-0.0062179565,-0.2437458,-0.18575191,0.27843234,0.05879147,1.1739212,0.2313356,1.1739212,"up","CPNE1",8904,"0006629 // lipid metabolic process // traceable author statement /// 0016192 // vesicle-mediated transport // traceable author statement","","0001786 // phosphatidylserine binding // inferred from direct assay /// 0005215 // transporter activity // traceable author statement /// 0005544 // calcium-dependent phospholipid binding // traceable author statement","chr20:34213967-34252854 (-) // 94.8 // q11.22"]
["11755583_a_at",0.30475426,-0.01670742,0.01670742,0.1784482,-0.116434574,-0.20753193,0.69272953,0.3873227,1.1096394,0.15009093,1.1096394,"up","FAM161A",84140,"0007601 // visual perception // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005813 // centrosome // inferred from direct assay","","chr2:62051988-62081188 (-) // 88.07 // p15"]
["11725660_a_at",0.15063858,-0.0191679,0.017241478,0.0665741,-0.06625652,-0.017241478,0.73151976,0.44064456,1.0390118,0.055212088,1.0390118,"up","DPP8",54878,"0006508 // proteolysis // non-traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006955 // immune response // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004177 // aminopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0008239 // dipeptidyl-peptidase activity // non-traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation","chr15:65737477-65810051 (-) // 98.54 // q22.31"]
["11745856_x_at",0.10661602,0.06254959,0.055356026,-0.055356026,-0.09817791,-0.19198036,0.12607299,0.011901576,1.1407732,0.19001196,1.1407732,"up","RNF145",153830,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:158584418-158636581 (-) // 97.67 // q33.3"]
["11719459_at",-0.017719269,0.040205,0.18179893,-0.102062225,0.017719269,-0.04153347,0.4907854,0.18397373,1.0792685,0.11005376,1.0792685,"up","EXOC5",10640,"0006810 // transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0048278 // vesicle docking // inferred from electronic annotation","0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0047485 // protein N-terminus binding // inferred from electronic annotation","chr14:57668879-57735726 (-) // 90.51 // q22.3"]
["11758646_s_at",0.26389408,0.033771515,0.021648407,-0.021648407,-0.09397125,-0.060526848,0.38629597,0.112764485,1.1212853,0.16515343,1.1212853,"up","MICU1",10367,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006952 // defense response // traceable author statement /// 0051561 // elevation of mitochondrial calcium ion concentration // inferred from mutant phenotype /// 0070509 // calcium ion import // inferred from direct assay","0005622 // intracellular // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr10:74127097-74127421 (-) // 100.0 // q22.1"]
["11732718_at",-0.25253963,-0.066101074,0.058483124,0.04186654,-0.04186678,0.058483124,0.6457159,0.3286648,-1.0763994,-0.106213555,1.0763994,"down","EREG",2069,"0001525 // angiogenesis // inferred from electronic annotation /// 0001550 // ovarian cumulus expansion // inferred from sequence or structural similarity /// 0001550 // ovarian cumulus expansion // inferred from electronic annotation /// 0001556 // oocyte maturation // inferred from sequence or structural similarity /// 0001556 // oocyte maturation // inferred from electronic annotation /// 0001819 // positive regulation of cytokine production // inferred from sequence or structural similarity /// 0001819 // positive regulation of cytokine production // inferred from electronic annotation /// 0007143 // female meiosis // inferred from sequence or structural similarity /// 0007143 // female meiosis // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from electronic annotation /// 0007267 // cell-cell signaling // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from sequence or structural similarity /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009299 // mRNA transcription // inferred from direct assay /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0009887 // organ morphogenesis // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // traceable author statement /// 0030728 // ovulation // inferred from sequence or structural similarity /// 0030728 // ovulation // inferred from electronic annotation /// 0042060 // wound healing // traceable author statement /// 0042108 // positive regulation of cytokine biosynthetic process // inferred from direct assay /// 0042327 // positive regulation of phosphorylation // inferred from direct assay /// 0042327 // positive regulation of phosphorylation // inferred from sequence or structural similarity /// 0042327 // positive regulation of phosphorylation // inferred from electronic annotation /// 0042700 // luteinizing hormone signaling pathway // inferred from sequence or structural similarity /// 0042700 // luteinizing hormone signaling pathway // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0043616 // keratinocyte proliferation // inferred from direct assay /// 0045089 // positive regulation of innate immune response // inferred from sequence or structural similarity /// 0045089 // positive regulation of innate immune response // inferred from electronic annotation /// 0045410 // positive regulation of interleukin-6 biosynthetic process // inferred from sequence or structural similarity /// 0045410 // positive regulation of interleukin-6 biosynthetic process // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from direct assay /// 0045740 // positive regulation of DNA replication // inferred from sequence or structural similarity /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0045741 // positive regulation of epidermal growth factor-activated receptor activity // inferred from sequence or structural similarity /// 0045741 // positive regulation of epidermal growth factor-activated receptor activity // inferred from electronic annotation /// 0045840 // positive regulation of mitosis // inferred from sequence or structural similarity /// 0045840 // positive regulation of mitosis // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0048146 // positive regulation of fibroblast proliferation // inferred from direct assay /// 0048160 // primary follicle stage // inferred from sequence or structural similarity /// 0048160 // primary follicle stage // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from sequence or structural similarity /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050680 // negative regulation of epithelial cell proliferation // traceable author statement /// 0051151 // negative regulation of smooth muscle cell differentiation // inferred from direct assay /// 0051781 // positive regulation of cell division // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005154 // epidermal growth factor receptor binding // inferred from sequence or structural similarity /// 0005154 // epidermal growth factor receptor binding // traceable author statement /// 0005154 // epidermal growth factor receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation","chr4:75230859-75254477 (+) // 83.41 // q13.3"]
["11742697_a_at",0.19094086,-0.26790285,-0.01458025,-0.16907215,0.01458025,0.12547517,0.9648515,0.90146565,-1.0145513,-0.02084179,1.0145513,"down","ITM2A",9452,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chrX:78615880-78623093 (-) // 95.54 // q21.1"]
["11719367_a_at",0.22088146,0.051653385,0.13788414,-0.3694148,-0.1900959,-0.051653385,0.20141342,0.030802634,1.2662196,0.34052765,1.2662196,"up","PLEKHO2",80301,"","","0005543 // phospholipid binding // inferred from electronic annotation","chr15:65134081-65160201 (+) // 98.17 // q22.31"]
["11721163_a_at",-0.018896103,0.041037083,0.05572319,-0.0077204704,0.004495144,-0.004494667,0.60458505,0.28466108,1.0199709,0.028527983,1.0199709,"up","KHNYN",23351,"","","","chr14:24898790-24910548 (+) // 89.48 // q12"]
["11756259_s_at",-0.14292288,-0.088522434,0.08745909,0.08293581,-0.014418125,0.014418125,0.6811496,0.37185174,-1.053829,-0.07564072,1.053829,"down","NFATC1",4772,"0000082 // G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 0001837 // epithelial to mesenchymal transition // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement","0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from sequence or structural similarity /// 0001085 // RNA polymerase II transcription factor binding // inferred from sequence or structural similarity /// 0001205 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0005528 // FK506 binding // traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0048273 // mitogen-activated protein kinase p38 binding // inferred from sequence or structural similarity","chr18:77253324-77289322 (+) // 93.7 // q23"]
["11760727_at",0.341527,-0.08918381,0.013042688,0.20333052,-0.013042927,-0.11834335,0.8857288,0.7088671,1.0457083,0.06448047,1.0457083,"up","FUCA2",2519,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006004 // fucose metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004560 // alpha-L-fucosidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0043169 // cation binding // inferred from electronic annotation","chr6:143817762-143832799 (-) // 77.67 // q24.2"]
["11747203_x_at",0.10280323,0.09947014,0.04197979,-0.042387962,-0.08076,-0.04197979,0.078630604,0.0044174497,1.0992049,0.13646033,1.0992049,"up","CLN3",1201,"0000046 // autophagic vacuole fusion // inferred from sequence or structural similarity /// 0001508 // regulation of action potential // inferred from sequence or structural similarity /// 0001575 // globoside metabolic process // inferred from mutant phenotype /// 0006457 // protein folding // traceable author statement /// 0006520 // cellular amino acid metabolic process // inferred from sequence or structural similarity /// 0006672 // ceramide metabolic process // inferred from direct assay /// 0006678 // glucosylceramide metabolic process // inferred from mutant phenotype /// 0006681 // galactosylceramide metabolic process // inferred from mutant phenotype /// 0006684 // sphingomyelin metabolic process // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // inferred from mutant phenotype /// 0007034 // vacuolar transport // not recorded /// 0007040 // lysosome organization // inferred from sequence or structural similarity /// 0007042 // lysosomal lumen acidification // inferred from mutant phenotype /// 0008219 // cell death // inferred from electronic annotation /// 0008306 // associative learning // inferred from sequence or structural similarity /// 0010468 // regulation of gene expression // inferred from mutant phenotype /// 0015809 // arginine transport // inferred from direct assay /// 0016044 // cellular membrane organization // inferred from sequence or structural similarity /// 0016236 // macroautophagy // non-traceable author statement /// 0016242 // negative regulation of macroautophagy // inferred from sequence or structural similarity /// 0016485 // protein processing // inferred from sequence or structural similarity /// 0030163 // protein catabolic process // non-traceable author statement /// 0035235 // ionotropic glutamate receptor signaling pathway // inferred from sequence or structural similarity /// 0035752 // lysosomal lumen pH elevation // inferred from direct assay /// 0042133 // neurotransmitter metabolic process // inferred from sequence or structural similarity /// 0042987 // amyloid precursor protein catabolic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043086 // negative regulation of catalytic activity // inferred from sequence or structural similarity /// 0043524 // negative regulation of neuron apoptotic process // inferred from sequence or structural similarity /// 0045861 // negative regulation of proteolysis // inferred from sequence or structural similarity /// 0047496 // vesicle transport along microtubule // inferred from mutant phenotype /// 0050885 // neuromuscular process controlling balance // inferred from sequence or structural similarity /// 0051480 // cytosolic calcium ion homeostasis // inferred from sequence or structural similarity","0000139 // Golgi membrane // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // traceable author statement /// 0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005770 // late endosome // inferred from direct assay /// 0005770 // late endosome // inferred from sequence or structural similarity /// 0005770 // late endosome // inferred from electronic annotation /// 0005776 // autophagic vacuole // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005795 // Golgi stack // inferred from direct assay /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005901 // caveola // inferred from direct assay /// 0008021 // synaptic vesicle // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // inferred from direct assay /// 0043005 // neuron projection // inferred from direct assay /// 0045121 // membrane raft // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0051082 // unfolded protein binding // traceable author statement","chr16:28488600-28503363 (-) // 94.27 // p11.2"]
["11741866_at",-0.5728102,0.0003376007,0.021258831,-0.14598894,-0.0003376007,0.29959822,0.6823126,0.37367994,-1.1767669,-0.23482853,1.1767669,"down","OR1J2",26740,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr9:125237967-125276376 (+) // 82.81 // q33.2"]
["11759504_at",0.08227873,-0.10760498,-0.0706892,0.04613781,-0.002869606,0.0028700829,0.75438344,0.4748882,-1.0333898,-0.047384556,1.0333898,"down","MAP7D3",79649,"","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","","chrX:135298972-135333738 (-) // 91.41 // q26.3"]
["11754168_a_at",0.06952667,0.0024867058,0.14726543,-0.13374329,-0.0024867058,-0.05212593,0.31394055,0.07461753,1.0987614,0.13587819,1.0987614,"up","SVEP1",79987,"0007155 // cell adhesion // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr9:113169574-113171077 (-) // 78.14 // q31.3"]
["11730182_a_at",0.0067009926,-0.036350727,-0.0870347,-0.0067009926,0.0823617,0.052090168,0.35673574,0.09643673,-1.0581018,-0.0814784,1.0581018,"down","SH3GL2",6456,"0002090 // regulation of receptor internalization // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007417 // central nervous system development // traceable author statement /// 0016044 // cellular membrane organization // traceable author statement /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048488 // synaptic vesicle endocytosis // inferred from electronic annotation","0000139 // Golgi membrane // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction","chr9:17578708-17797122 (+) // 97.99 // p22.2"]
["11731735_s_at",-0.04163742,-0.004316807,-0.12475157,0.16507101,0.00431633,0.25568008,0.30736512,0.07183987,-1.147577,-0.19859101,1.147577,"down","VCX2",51480,"","","","chrX:8432870-8434551 (+) // 96.14 // p22.31 /// chrX:7810302-7812184 (+) // 95.66 // p22.31 /// chrX:8137984-8139308 (-) // 97.83 // p22.31 /// chrX:6451658-6453159 (-) // 97.23 // p22.31"]
["11723206_at",-0.080161095,-0.041032314,0.0632658,0.013219357,-0.013219357,0.51059675,0.6570622,0.3413862,-1.1403749,-0.18950818,1.1403749,"down","TCL1A",8115,"0007275 // multicellular organismal development // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr14:96176304-96180829 (-) // 98.38 // q32.13"]
["11752591_a_at",0.58374023,-0.009934902,0.17313433,-0.074813366,0.009934902,-0.06450844,0.47949788,0.17525771,1.2244288,0.29210883,1.2244288,"up","CIT /// MIR1178","100302274 /// 11113","0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from sequence or structural similarity /// 0007067 // mitosis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0033205 // cell cycle cytokinesis // inferred from mutant phenotype /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0048699 // generation of neurons // inferred from sequence or structural similarity /// 0051301 // cell division // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from sequence or structural similarity /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005083 // small GTPase regulator activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:120125564-120315092 (-) // 97.0 // q24.23"]
["11735463_a_at",-0.031899214,0.1287942,0.112118244,-0.08216262,0.031898975,-0.25923944,0.45268112,0.15536599,1.1272744,0.17283873,1.1272744,"up","NTNG1",22854,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from sequence or structural similarity /// 0007409 // axonogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation /// 0046658 // anchored to plasma membrane // inferred from sequence or structural similarity /// 0046658 // anchored to plasma membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:107682628-108024476 (+) // 95.09 // p13.3"]
["11751342_a_at",0.04019451,0.006837845,-0.1747694,0.11961937,-0.11266422,-0.006837845,0.8701402,0.6760208,-1.0299813,-0.04261808,1.0299813,"down","NDRG1",10397,"0010038 // response to metal ion // traceable author statement /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from expression pattern /// 0032287 // peripheral nervous system myelin maintenance // inferred from electronic annotation /// 0045576 // mast cell activation // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from expression pattern /// 0090232 // positive regulation of spindle checkpoint // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0055038 // recycling endosome membrane // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from direct assay /// 0017137 // Rab GTPase binding // inferred from direct assay /// 0043015 // gamma-tubulin binding // inferred from direct assay /// 0045296 // cadherin binding // inferred from direct assay","chr8:134250940-134309495 (-) // 99.93 // q24.22"]
["11747398_a_at",0.25743818,-0.006260395,0.027659416,-0.12789726,0.006259918,-0.0129647255,0.52625835,0.2117658,1.100236,0.13781309,1.100236,"up","PLAT",5327,"0001666 // response to hypoxia // inferred from electronic annotation /// 0006464 // cellular protein modification process // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0014909 // smooth muscle cell migration // inferred from electronic annotation /// 0031639 // plasminogen activation // inferred from direct assay /// 0035249 // synaptic transmission, glutamatergic // inferred from electronic annotation /// 0042730 // fibrinolysis // traceable author statement /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0045861 // negative regulation of proteolysis // inferred from direct assay /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0030141 // secretory granule // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from direct assay /// 0004252 // serine-type endopeptidase activity // traceable author statement /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr8:42033078-42065083 (-) // 99.75 // p11.21"]
["11734753_at",-0.11079168,-0.14095831,-0.036825657,0.13456392,0.26944685,0.03682518,0.20059255,0.030584747,-1.1835636,-0.24313721,1.1835636,"down","TATDN3",128387,"0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","0004518 // nuclease activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016888 // endodeoxyribonuclease activity, producing 5'-phosphomonoesters // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:212965169-212990553 (+) // 70.18 // q32.3"]
["11736108_at",-0.3296857,-0.099449635,0.1257329,-0.047955036,0.13412428,0.047955036,0.67229277,0.36122382,-1.1063764,-0.1458423,1.1063764,"down","ARL8A",127829,"0006184 // GTP catabolic process // non-traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from sequence or structural similarity /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0031902 // late endosome membrane // inferred from electronic annotation /// 0051233 // spindle midzone // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // non-traceable author statement /// 0005525 // GTP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from electronic annotation /// 0043014 // alpha-tubulin binding // inferred from sequence or structural similarity /// 0048487 // beta-tubulin binding // inferred from sequence or structural similarity","chr1:202101976-202113871 (-) // 98.38 // q32.1"]
["11742057_a_at",0,-0.26114988,0.08349228,-0.23705769,0,0.10920143,0.9695556,0.9147621,-1.011573,-0.016600374,1.011573,"down","CNTN1",1272,"0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0090072 // positive regulation of sodium ion transport via voltage-gated sodium channel activity // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation","0001948 // glycoprotein binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr12:41086357-41464094 (+) // 99.85 // q12"]
["11750831_a_at",0.060252666,0.05951786,-0.024285316,-0.011436462,-0.11036205,0.011436462,0.5309691,0.21596721,1.04871,0.068615764,1.04871,"up","ZNF571",51276,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:38055470-38085662 (-) // 99.85 // q13.12"]
["11718623_a_at",0.0067710876,-0.21391916,-0.09103346,-0.0067710876,0.077931404,0.06952,0.36828002,0.10237148,-1.1067177,-0.14628728,1.1067177,"down","PLA2G1B",5319,"0000187 // activation of MAPK activity // inferred from sequence or structural similarity /// 0002446 // neutrophil mediated immunity // inferred from sequence or structural similarity /// 0006633 // fatty acid biosynthetic process // inferred from direct assay /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006644 // phospholipid metabolic process // inferred from electronic annotation /// 0007015 // actin filament organization // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007243 // intracellular protein kinase cascade // inferred from sequence or structural similarity /// 0010524 // positive regulation of calcium ion transport into cytosol // inferred from sequence or structural similarity /// 0015758 // glucose transport // inferred from sequence or structural similarity /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0019370 // leukotriene biosynthetic process // inferred from sequence or structural similarity /// 0030593 // neutrophil chemotaxis // inferred from sequence or structural similarity /// 0032431 // activation of phospholipase A2 activity // traceable author statement /// 0032637 // interleukin-8 production // inferred from sequence or structural similarity /// 0032869 // cellular response to insulin stimulus // inferred from sequence or structural similarity /// 0044240 // multicellular organismal lipid catabolic process // inferred from direct assay /// 0045740 // positive regulation of DNA replication // inferred from direct assay /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0046470 // phosphatidylcholine metabolic process // inferred from direct assay /// 0048146 // positive regulation of fibroblast proliferation // inferred by curator /// 0050482 // arachidonic acid secretion // traceable author statement /// 0050714 // positive regulation of protein secretion // traceable author statement /// 0050778 // positive regulation of immune response // inferred from sequence or structural similarity /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from sequence or structural similarity","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0030141 // secretory granule // inferred from electronic annotation","0004623 // phospholipase A2 activity // inferred from direct assay /// 0004623 // phospholipase A2 activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from direct assay /// 0005102 // receptor binding // inferred from physical interaction /// 0005102 // receptor binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0032052 // bile acid binding // inferred from sequence or structural similarity /// 0043498 // cell surface binding // inferred from direct assay /// 0043498 // cell surface binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047498 // calcium-dependent phospholipase A2 activity // inferred from direct assay /// 0047498 // calcium-dependent phospholipase A2 activity // inferred from electronic annotation","chr12:120759918-120765593 (-) // 90.63 // q24.31"]
["11752943_a_at",0.017755985,-0.017755985,0.32726908,-0.07186365,0.11294794,-0.19088364,0.63916534,0.32179856,1.1165307,0.15902287,1.1165307,"up","CATSPER2",117155,"0001539 // ciliary or flagellar motility // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0009566 // fertilization // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030317 // sperm motility // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0009434 // microtubule-based flagellum // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019861 // flagellum // inferred from electronic annotation /// 0020017 // flagellar membrane // inferred from electronic annotation /// 0036128 // CatSper complex // inferred from sequence or structural similarity /// 0042995 // cell projection // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr15:43922870-43940259 (-) // 100.0 // q15.3"]
["11722335_a_at",-0.27251434,0.012163639,-0.012163639,-0.061481476,0.2635708,0.4173422,0.44725645,0.15147449,-1.2288555,-0.29731527,1.2288555,"down","FNDC5",252995,"0014850 // response to muscle activity // inferred from sequence or structural similarity /// 0090336 // positive regulation of brown fat cell differentiation // inferred from sequence or structural similarity","0005576 // extracellular region // inferred from sequence or structural similarity /// 0005576 // extracellular region // inferred from electronic annotation /// 0005777 // peroxisome // inferred from electronic annotation /// 0005778 // peroxisomal membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005179 // hormone activity // inferred from electronic annotation","chr1:33327869-33336414 (-) // 94.07 // p35.1"]
["11722429_s_at",0.3118205,-0.19430494,-0.32826948,0.35572004,0.06655979,-0.06656027,0.744821,0.46022445,-1.1398346,-0.18882455,1.1398346,"down","PPL",5493,"0031424 // keratinization // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030057 // desmosome // inferred from electronic annotation","0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr16:4932408-4987136 (-) // 98.5 // p13.3"]
["11750014_x_at",0.13614273,-0.1431303,-0.122961044,0.16353607,0.07040501,-0.07040501,0.7268507,0.4344785,-1.0701612,-0.09782816,1.0701612,"down","MIR5096 /// SSBP1","100616427 /// 6742","0006260 // DNA replication // inferred from electronic annotation /// 0051096 // positive regulation of helicase activity // inferred from direct assay /// 0070584 // mitochondrion morphogenesis // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0042645 // mitochondrial nucleoid // inferred from direct assay /// 0042645 // mitochondrial nucleoid // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0003697 // single-stranded DNA binding // inferred from electronic annotation","chr7:141438406-141450257 (+) // 83.24 // q34"]
["11738003_s_at",-0.17180967,0.026576519,-0.026576519,-0.07739973,0.057293415,0.02693224,0.7411876,0.4545119,-1.0421371,-0.05954515,1.0421371,"down","SLC35E2 /// SLC35E2B","728661 /// 9906","","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:1660748-1677493 (-) // 92.67 // p36.33"]
["11716390_a_at",0.034122467,-0.2090354,-0.29785204,0.19182158,0.19453335,-0.03412199,0.34972653,0.09237538,-1.2099935,-0.27499926,1.2099935,"down","BACE1",23621,"0006508 // proteolysis // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0006509 // membrane protein ectodomain proteolysis // traceable author statement /// 0050435 // beta-amyloid metabolic process // inferred from direct assay","0005624 // membrane fraction // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0004175 // endopeptidase activity // inferred from electronic annotation /// 0004190 // aspartic-type endopeptidase activity // inferred from direct assay /// 0004190 // aspartic-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008798 // beta-aspartyl-peptidase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction","chr11:117156413-117186972 (-) // 98.47 // q23.3"]
["11758059_s_at",0.13867092,-0.022862434,0.011687279,0.13772297,-0.012013435,-0.011687279,0.9834216,0.9519096,1.0031179,0.004491208,1.0031179,"up","ANKRD49",54851,"0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay","0005634 // nucleus // inferred by curator","","chr11:94232287-94232743 (+) // 85.84 // q21"]
["11745521_x_at",0.12662601,-0.058675766,-0.006386757,-0.10151672,0.006386757,0.015648842,0.7841716,0.52011335,1.033125,0.047014877,1.033125,"up","ABI1",10006,"0001756 // somitogenesis // inferred from electronic annotation /// 0006928 // cellular component movement // inferred from direct assay /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0008154 // actin polymerization or depolymerization // non-traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0009987 // cellular process // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0061098 // positive regulation of protein tyrosine kinase activity // inferred from electronic annotation","0005622 // intracellular // inferred from direct assay /// 0005625 // soluble fraction // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from direct assay /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030175 // filopodium // inferred from direct assay /// 0030175 // filopodium // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // traceable author statement /// 0030296 // protein tyrosine kinase activator activity // inferred from electronic annotation","chr10:27037498-27149792 (-) // 100.0 // p12.1"]
["11734954_at",-0.11385107,0.011103392,0.023515224,-0.094424486,0.18884563,-0.011103153,0.8299769,0.5982442,-1.0382713,-0.05418348,1.0382713,"down","KCNJ13",3769,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // non-traceable author statement /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation","0008076 // voltage-gated potassium channel complex // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005242 // inward rectifier potassium channel activity // non-traceable author statement /// 0005242 // inward rectifier potassium channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation","chr2:233630576-233641275 (-) // 97.77 // q37.1"]
["11757532_s_at",0.15770769,-0.29962873,-0.10718775,0.30454636,-0.05141306,0.051413536,0.6537234,0.33768302,-1.1364639,-0.18455184,1.1364639,"down","RBM47",54502,"","0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr4:40425557-40426399 (-) // 85.54 // p14"]
["11739118_a_at",-0.018297195,-0.024867058,-0.08764553,0.0937233,0.018297195,0.019615173,0.27760994,0.05843008,-1.062514,-0.08748178,1.062514,"down","CNPY3",10695,"0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement","0005102 // receptor binding // inferred from electronic annotation","chr6:42896859-42907343 (+) // 98.01 // p21.1"]
["11753291_a_at",0.07286835,0.009473801,-0.13619232,0.15588188,-0.06641483,-0.009473801,0.8565475,0.64949864,-1.0314075,-0.04461441,1.0314075,"down","CD44",960,"0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // non-traceable author statement /// 0016337 // cell-cell adhesion // non-traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0030214 // hyaluronan catabolic process // inferred from direct assay /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0034116 // positive regulation of heterotypic cell-cell adhesion // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0043518 // negative regulation of DNA damage response, signal transduction by p53 class mediator // inferred from direct assay /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from direct assay /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0051216 // cartilage development // inferred from expression pattern /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0070487 // monocyte aggregation // inferred from mutant phenotype /// 1900625 // positive regulation of monocyte aggregation // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004415 // hyalurononglucosaminidase activity // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // non-traceable author statement /// 0005540 // hyaluronic acid binding // inferred from direct assay /// 0005540 // hyaluronic acid binding // inferred from electronic annotation /// 0005540 // hyaluronic acid binding // non-traceable author statement","chr11:35160850-35250880 (+) // 100.0 // p13"]
["11750739_a_at",-0.14249039,-0.0893383,-0.030029297,0.055407524,0.13687515,0.030029297,0.17950945,0.024294375,-1.1183641,-0.16138995,1.1183641,"down","ANKRD32",84250,"","0005634 // nucleus // inferred from electronic annotation /// 0005813 // centrosome // inferred from electronic annotation","","chr5:94014103-94031571 (+) // 97.39 // q15"]
["11732432_a_at",-0.30154467,-0.09850931,0.013292313,-0.013291836,0.17395782,0.14310884,0.36770236,0.101984456,-1.1729803,-0.23017879,1.1729803,"down","GK",2710,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006071 // glycerol metabolic process // inferred from mutant phenotype /// 0006071 // glycerol metabolic process // non-traceable author statement /// 0006071 // glycerol metabolic process // inferred from electronic annotation /// 0006072 // glycerol-3-phosphate metabolic process // inferred from electronic annotation /// 0006641 // triglyceride metabolic process // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0019563 // glycerol catabolic process // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046167 // glycerol-3-phosphate biosynthetic process // inferred from mutant phenotype","0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // non-traceable author statement /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004370 // glycerol kinase activity // inferred from mutant phenotype /// 0004370 // glycerol kinase activity // non-traceable author statement /// 0004370 // glycerol kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation","chrX:30671475-30748908 (+) // 96.57 // p21.2"]
["11735717_a_at",-0.12335634,0.032975197,0.09732485,0.016382694,-0.016382694,-0.028720379,0.95275456,0.8675792,1.0082742,0.011888029,1.0082742,"up","ZNF226",7769,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:44669907-44681836 (+) // 96.04 // q13.31"]
["11716591_a_at",0.026330948,-0.0013980865,-0.10066223,0.041908264,0.0013980865,-0.16409874,0.9458797,0.84878933,1.0104662,0.01502109,1.0104662,"up","BTBD1",53339,"0016567 // protein ubiquitination // inferred from electronic annotation /// 0043393 // regulation of protein binding // non-traceable author statement","0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr15:83685174-83736186 (-) // 96.3 // q25.2"]
["11732784_a_at",-0.04212475,0.04212475,-0.110744,0.15893698,-0.16693187,0.56526256,0.6724981,0.36155197,-1.1668916,-0.22267051,1.1668916,"down","TRIM42",287015,"","0005622 // intracellular // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:140396865-140419991 (+) // 99.22 // q23"]
["11715474_at",-0.3296566,0.3121624,0.20636368,-0.51070786,-0.0025053024,0.0025053024,0.71858954,0.42313787,1.1754332,0.2331925,1.1754332,"up","DDX17",10521,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006396 // RNA processing // traceable author statement /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0033148 // positive regulation of intracellular estrogen receptor signaling pathway // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0072358 // cardiovascular system development // inferred from electronic annotation /// 2001014 // regulation of skeletal muscle cell differentiation // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0003724 // RNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0008186 // RNA-dependent ATPase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030331 // estrogen receptor binding // inferred from direct assay","chr22:38879442-38902345 (-) // 87.68 // q13.1"]
["11727944_a_at",-0.30054426,-0.0020136833,-0.0024299622,0.0020136833,0.12602758,0.3304329,0.428864,0.13903025,-1.1929117,-0.2544873,1.1929117,"down","ARHGAP8 /// PRR5-ARHGAP8","23779 /// 553158","0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0032321 // positive regulation of Rho GTPase activity // inferred from direct assay /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr22:45098112-45258664 (+) // 92.33 // q13.31"]
["11752271_a_at",-0.32714367,-0.17514801,0.008595943,0.0465312,-0.008595943,0.17019367,0.36713865,0.10172575,-1.1760436,-0.23394158,1.1760436,"down","CMKLR1",1240,"0001501 // skeletal system development // traceable author statement /// 0006935 // chemotaxis // inferred from direct assay /// 0006935 // chemotaxis // traceable author statement /// 0006955 // immune response // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007186 // G-protein coupled receptor signaling pathway // non-traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0010759 // positive regulation of macrophage chemotaxis // inferred from mutant phenotype /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0032695 // negative regulation of interleukin-12 production // inferred from sequence or structural similarity /// 0032695 // negative regulation of interleukin-12 production // inferred from electronic annotation /// 0050848 // regulation of calcium-mediated signaling // inferred from direct assay /// 0070098 // chemokine-mediated signaling pathway // traceable author statement","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // non-traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004950 // chemokine receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr12:108684669-108733076 (-) // 97.27 // q23.3"]
["11759885_at",0.2663169,0.25368857,0.004341364,-0.1936388,-0.004341364,-0.12403107,0.25747502,0.05004591,1.2159799,0.28211942,1.2159799,"up","RIMS1",22999,"0006461 // protein complex assembly // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0006944 // cellular membrane fusion // non-traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // traceable author statement /// 0007601 // visual perception // inferred from electronic annotation /// 0014047 // glutamate secretion // traceable author statement /// 0016079 // synaptic vesicle exocytosis // traceable author statement /// 0017156 // calcium ion-dependent exocytosis // traceable author statement /// 0045055 // regulated secretory pathway // non-traceable author statement /// 0046903 // secretion // non-traceable author statement /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from sequence or structural similarity /// 0042734 // presynaptic membrane // non-traceable author statement /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005083 // small GTPase regulator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:72596405-72973703 (+) // 85.56 // q13"]
["11744530_a_at",0.0019636154,-0.0019636154,0.1409688,-0.10242796,-0.20496225,0.17710495,0.7746195,0.5045695,1.0646787,0.09041808,1.0646787,"up","SEMA4G",57715,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr10:102729279-102745372 (+) // 98.43 // q24.31"]
["11756190_a_at",0.37292957,0.03155327,0.08123207,-0.03155327,-0.07020283,-0.19755745,0.3459593,0.09028771,1.1988708,0.26167616,1.1988708,"up","CLK3",1198,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0043484 // regulation of RNA splicing // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation","0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from sequence or structural similarity /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004712 // protein serine/threonine/tyrosine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr15:74914142-74922459 (+) // 93.1 // q24.1"]
["11726280_a_at",0.36671877,0.06470251,-0.06470251,0.17180872,-0.24749947,-0.27471542,0.6034478,0.2830872,1.1802084,0.23904169,1.1802084,"up","BCR",613,"0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032855 // positive regulation of Rac GTPase activity // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0043314 // negative regulation of neutrophil degranulation // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0050728 // negative regulation of inflammatory response // inferred from electronic annotation /// 0050766 // positive regulation of phagocytosis // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051726 // regulation of cell cycle // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // traceable author statement /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030675 // Rac GTPase activator activity // inferred from electronic annotation","chr22:23522551-23660221 (+) // 95.85 // q11.23"]
["11747667_x_at",-0.09539127,0.060525417,-0.01644516,-0.0118665695,0.011867046,0.28812551,0.66140765,0.34708196,-1.081584,-0.11314568,1.081584,"down","C16orf58",64755,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr16:31504775-31519705 (-) // 99.81 // p11.2"]
["11750067_a_at",0,0.03113246,-0.0615108,0.014587402,-0.107922554,0,0.8717625,0.6799781,1.0146524,0.020985533,1.0146524,"up","SPIB",6689,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0030225 // macrophage differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr19:50922197-50931844 (+) // 98.37 // q13.33"]
["11738513_at",-0.1093688,0.06970644,-0.06970644,-0.14734459,0.07308006,0.16021514,0.81551456,0.5737388,-1.0461621,-0.06510645,1.0461621,"down","GADL1",339896,"0019752 // carboxylic acid metabolic process // inferred from electronic annotation","","0003824 // catalytic activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation","chr3:30767691-30936153 (-) // 90.49 // p24.1"]
["11762945_at",-0.2507944,-0.25923777,-0.00061655045,0.00061655045,0.11768913,0.09500837,0.27843234,0.058782488,-1.1820744,-0.24132088,1.1820744,"down","LOC100133106",100133106,"","","","chr5:169372500-169373461 (-) // 84.19 // q35.1"]
["11736153_s_at",-0.115440845,0.60057116,0.23374462,-0.018355846,0.018355846,-0.0679512,0.59668493,0.27630275,1.1993688,0.2622754,1.1993688,"up","XPR1",9213,"0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // traceable author statement","chr1:180601147-180859387 (+) // 95.29 // q25.3"]
["11735688_a_at",0.054348946,-0.018686295,0.018686295,0.024877548,-0.054602623,-0.2504034,0.5770403,0.25734177,1.0803453,0.11149246,1.0803453,"up","C21orf59",56683,"","0005634 // nucleus // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay","","chr21:33973968-33985332 (-) // 95.39 // q22.11"]
["11756310_a_at",0.0709672,0.07507038,-0.024132729,0.024132252,-0.10797024,-0.18531704,0.4193436,0.13272524,1.0945617,0.13035327,1.0945617,"up","NXT2",55916,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","","chrX:108780109-108786231 (+) // 97.06 // q23"]
["11732506_x_at",0,-0.011034727,0,-0.12706041,0,0.033104897,0.83190864,0.6024926,1.0193435,0.027640289,1.0193435,"up","TP73-AS1",57212,"","0005576 // extracellular region // inferred from electronic annotation","","chr1:3652549-3663886 (-) // 95.13 // p36.32"]
["11761529_x_at",-0.026994228,0.047145844,0.021987438,0.20107651,-0.09829092,-0.021987438,0.9628374,0.8958413,-1.0089722,-0.012886379,1.0089722,"down","MUC1",4582,"0006916 // anti-apoptosis // inferred from direct assay /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // inferred from direct assay /// 0006978 // DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator // inferred from direct assay /// 0010944 // negative regulation of transcription by competitive promoter binding // inferred from direct assay /// 0016266 // O-glycan processing // traceable author statement /// 0036003 // positive regulation of transcription from RNA polymerase II promoter in response to stress // inferred from direct assay /// 0043618 // regulation of transcription from RNA polymerase II promoter in response to stress // inferred from direct assay /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0090240 // positive regulation of histone H4 acetylation // inferred from direct assay","0000790 // nuclear chromatin // inferred from direct assay /// 0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005796 // Golgi lumen // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // not recorded /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // not recorded /// 0016324 // apical plasma membrane // inferred from electronic annotation","0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0002039 // p53 binding // inferred from physical interaction /// 0003712 // transcription cofactor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr1:155158423-155162684 (-) // 95.76 // q22"]
["11730386_at",-0.09233832,-0.094507456,-0.020012379,0.020012379,0.23692393,0.43659115,0.30516407,0.07083118,-1.2312541,-0.30012852,1.2312541,"down","GREM2",64388,"0030509 // BMP signaling pathway // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation","chr1:240652874-240775624 (-) // 96.38 // q43"]
["11745247_at",-0.13509083,-0.08021927,0.041399956,-0.04139948,0.10052204,0.13202095,0.48339933,0.17816904,-1.0880045,-0.121684484,1.0880045,"down","C5orf65",389333,"","","","chr5:138727634-138729130 (-) // 99.93 // q31.2"]
["11753162_a_at",-0.067783356,0.10262394,0.0013036728,-0.19340515,-0.0013036728,0.056786537,0.8054779,0.5557219,1.0410376,0.05802212,1.0410376,"up","YIPF5",81555,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030134 // ER to Golgi transport vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0042175 // nuclear outer membrane-endoplasmic reticulum membrane network // inferred from electronic annotation","","chr5:143537730-143550194 (-) // 87.41 // q31.3"]
["11751928_x_at",0.23150015,0.08193445,0.24754858,-0.08193445,-0.16079044,-0.27918005,0.11494805,0.009774736,1.2842826,0.36096266,1.2842826,"up","EIF4G3",8672,"0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006446 // regulation of translational initiation // traceable author statement /// 0007128 // meiotic prophase I // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016070 // RNA metabolic process // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0016281 // eukaryotic translation initiation factor 4F complex // traceable author statement","0000339 // RNA cap binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement","chr1:21133157-21377395 (-) // 99.62 // p36.12"]
["11764202_at",0.17947912,-0.21187663,-0.12371683,-0.053832054,0.12098694,0.053832054,0.780363,0.5135435,-1.066118,-0.09236713,1.066118,"down","","","","","","chr4:39822231-39822835 (-) // 67.22 // p14"]
["11748831_x_at",0.099910736,0.03326559,-0.079288006,-0.025047064,-0.030148268,0.025046825,0.8507922,0.6383999,1.0196064,0.028012266,1.0196064,"up","RFPL2",10739,"","","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr22:32586425-32589181 (-) // 77.38 // q12.3"]
["11748021_x_at",0.039492607,-0.09565544,-0.08598423,0.1597023,-0.005493164,0.005493164,0.53307825,0.21764156,-1.0722315,-0.10061646,1.0722315,"down","SUMF2",25870,"","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation","0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:56131957-56147525 (+) // 99.8 // p11.2"]
["11756954_s_at",-0.008348942,-0.119940996,0.008348942,0.16408491,0.31455135,-0.17972898,0.70914537,0.40953618,-1.101612,-0.13961615,1.101612,"down","ZEB2",9839,"0001755 // neural crest cell migration // inferred from electronic annotation /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001843 // neural tube closure // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007399 // nervous system development // non-traceable author statement /// 0007417 // central nervous system development // inferred from electronic annotation /// 0021766 // hippocampus development // inferred from electronic annotation /// 0021846 // cell proliferation in forebrain // inferred from electronic annotation /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0043507 // positive regulation of JUN kinase activity // inferred from electronic annotation /// 0048598 // embryonic morphogenesis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019208 // phosphatase regulator activity // non-traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046332 // SMAD binding // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:145145584-145277669 (-) // 96.21 // q22.3"]
["11740685_s_at",-0.18110132,0.1711278,0.18461657,-0.07278156,0,0,0.7938377,0.53658575,1.0588329,0.0824749,1.0588329,"up","NAPEPLD",222236,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0009395 // phospholipid catabolic process // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation","0004620 // phospholipase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070290 // NAPE-specific phospholipase D activity // inferred from electronic annotation","chr7:102740022-102789679 (-) // 88.33 // q22.1"]
["11735980_at",-0.11180282,-0.055296898,0.036006927,0.34833574,-0.036006927,0.19176626,0.44712234,0.1513943,-1.1580755,-0.21172924,1.1580755,"down","OR5M11",219487,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:56309737-56310757 (-) // 99.61 // q12.1"]
["11752463_x_at",-0.064400196,0.057421207,-0.04229641,-0.100036144,0.04229641,0.13306141,0.8413922,0.620425,-1.0292064,-0.041532326,1.0292064,"down","ANKLE1",126549,"","0005635 // nuclear envelope // inferred from electronic annotation","","chr19:17392727-17397731 (+) // 92.9 // p13.11"]
["11763106_x_at",-0.07968593,0.05979967,-0.47857928,0.024799347,0.18989801,-0.024799347,0.5770741,0.25743148,-1.1723915,-0.22945446,1.1723915,"down","TTTY6B",441543,"","","","chrY:24291168-24292831 (+) // 76.23 // q11.223 /// chrY:24585886-24587549 (-) // 76.23 // q11.223"]
["11735887_at",-0.037837982,0.20711803,-0.0947876,-0.06579256,0.037837982,0.43587065,0.8118268,0.56781036,-1.0800823,-0.11114124,1.0800823,"down","NEK11",79858,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0031572 // G2/M transition DNA damage checkpoint // inferred from mutant phenotype /// 0031573 // intra-S DNA damage checkpoint // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:130745693-130893982 (+) // 96.07 // q22.1"]
["11760220_at",-0.13730574,0.2176323,-0.040769577,-0.04314041,0.040769577,0.33748674,0.8097505,0.5636696,-1.0706743,-0.098519675,1.0706743,"down","NUTF2",10204,"0006611 // protein export from nucleus // inferred from direct assay /// 0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005643 // nuclear pore // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0015630 // microtubule cytoskeleton // inferred from direct assay","0005215 // transporter activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr16:67880825-67906470 (+) // 94.98 // q22.1"]
["11742113_a_at",-0.36741066,0.07627487,-0.0026636124,-0.23695803,0.0026636124,0.074513435,0.92553324,0.8010982,-1.0314492,-0.044672765,1.0314492,"down","ABL2",27,"0006464 // cellular protein modification process // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0010506 // regulation of autophagy // traceable author statement /// 0010976 // positive regulation of neuron projection development // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0030100 // regulation of endocytosis // traceable author statement /// 0030155 // regulation of cell adhesion // traceable author statement /// 0051353 // positive regulation of oxidoreductase activity // inferred from direct assay /// 0071300 // cellular response to retinoic acid // inferred from mutant phenotype /// 2000145 // regulation of cell motility // traceable author statement /// 2000249 // regulation of actin cytoskeleton reorganization // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0003785 // actin monomer binding // traceable author statement /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004715 // non-membrane spanning protein tyrosine kinase activity // traceable author statement /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051015 // actin filament binding // traceable author statement","chr1:179081443-179198819 (-) // 86.03 // q25.2"]
["11721583_x_at",-0.13229132,-0.2238388,0.18183374,-0.049781322,0.049781322,0.3431611,0.6787162,0.36841607,-1.1269987,-0.1724858,1.1269987,"down","LRMP",4033,"0006903 // vesicle targeting // traceable author statement /// 0006906 // vesicle fusion // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:25205240-25261269 (+) // 98.05 // p12.1"]
["11729021_a_at",0.115994215,0.0069937706,-0.21536303,-0.006993532,0.021001577,-0.19609308,0.93132436,0.81393546,1.0209438,0.029903397,1.0209438,"up","CNTN4",152330,"0007155 // cell adhesion // inferred from electronic annotation /// 0007158 // neuron cell-cell adhesion // traceable author statement /// 0007399 // nervous system development // inferred from mutant phenotype /// 0007409 // axonogenesis // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007413 // axonal fasciculation // traceable author statement /// 0007420 // brain development // inferred from sequence or structural similarity /// 0007420 // brain development // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0031175 // neuron projection development // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from mutant phenotype /// 0048167 // regulation of synaptic plasticity // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // non-traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030424 // axon // non-traceable author statement /// 0031225 // anchored to membrane // inferred from electronic annotation","","chr3:2140609-3099644 (+) // 97.83 // p26.3"]
["11729546_at",0.32758713,0.09526062,-0.0952611,0.14963055,-0.3077283,-0.29645395,0.5697041,0.25013003,1.1980705,0.26071283,1.1980705,"up","ZFPM1",161882,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0002295 // T-helper cell lineage commitment // inferred by curator /// 0003151 // outflow tract morphogenesis // inferred from sequence or structural similarity /// 0003151 // outflow tract morphogenesis // inferred from electronic annotation /// 0003181 // atrioventricular valve morphogenesis // inferred from sequence or structural similarity /// 0003181 // atrioventricular valve morphogenesis // inferred from electronic annotation /// 0003192 // mitral valve formation // inferred from sequence or structural similarity /// 0003192 // mitral valve formation // inferred from electronic annotation /// 0003195 // tricuspid valve formation // inferred from sequence or structural similarity /// 0003195 // tricuspid valve formation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0010724 // regulation of definitive erythrocyte differentiation // inferred from direct assay /// 0010724 // regulation of definitive erythrocyte differentiation // inferred from mutant phenotype /// 0030218 // erythrocyte differentiation // inferred from sequence or structural similarity /// 0030218 // erythrocyte differentiation // inferred from electronic annotation /// 0030219 // megakaryocyte differentiation // inferred from sequence or structural similarity /// 0030219 // megakaryocyte differentiation // inferred from electronic annotation /// 0030220 // platelet formation // inferred from genetic interaction /// 0030851 // granulocyte differentiation // inferred from electronic annotation /// 0032091 // negative regulation of protein binding // inferred from sequence or structural similarity /// 0032091 // negative regulation of protein binding // inferred from electronic annotation /// 0032642 // regulation of chemokine production // inferred from electronic annotation /// 0035162 // embryonic hemopoiesis // inferred from sequence or structural similarity /// 0035162 // embryonic hemopoiesis // inferred from electronic annotation /// 0035855 // megakaryocyte development // inferred from electronic annotation /// 0045078 // positive regulation of interferon-gamma biosynthetic process // inferred from direct assay /// 0045403 // negative regulation of interleukin-4 biosynthetic process // inferred from direct assay /// 0045599 // negative regulation of fat cell differentiation // inferred from sequence or structural similarity /// 0045599 // negative regulation of fat cell differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048872 // homeostasis of number of cells // inferred from electronic annotation /// 0055008 // cardiac muscle tissue morphogenesis // inferred from sequence or structural similarity /// 0055008 // cardiac muscle tissue morphogenesis // inferred from electronic annotation /// 0060318 // definitive erythrocyte differentiation // inferred from electronic annotation /// 0060319 // primitive erythrocyte differentiation // inferred from electronic annotation /// 0060377 // negative regulation of mast cell differentiation // inferred from sequence or structural similarity /// 0060377 // negative regulation of mast cell differentiation // inferred from electronic annotation /// 0060412 // ventricular septum morphogenesis // inferred from sequence or structural similarity /// 0060412 // ventricular septum morphogenesis // inferred from electronic annotation /// 0060413 // atrial septum morphogenesis // inferred from sequence or structural similarity /// 0060413 // atrial septum morphogenesis // inferred from electronic annotation /// 0071733 // transcriptional activation by promoter-enhancer looping // inferred from sequence or structural similarity /// 0071733 // transcriptional activation by promoter-enhancer looping // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from direct assay","0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0001085 // RNA polymerase II transcription factor binding // inferred from physical interaction /// 0001102 // RNA polymerase II activating transcription factor binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:88519724-88601572 (+) // 77.95 // q24.2"]
["11763825_at",-0.43878126,0.059140682,0.05567932,-0.094139576,-0.05567932,0.12296677,0.83441216,0.6084055,-1.0710578,-0.09903633,1.0710578,"down","P2RX6",9127,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // not recorded /// 0006936 // muscle contraction // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0035590 // purinergic nucleotide receptor signaling pathway // not recorded /// 0035590 // purinergic nucleotide receptor signaling pathway // non-traceable author statement /// 0051260 // protein homooligomerization // inferred from physical interaction /// 0051291 // protein heterooligomerization // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005887 // integral to plasma membrane // traceable author statement /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation","0001614 // purinergic nucleotide receptor activity // not recorded /// 0001614 // purinergic nucleotide receptor activity // non-traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0004931 // extracellular ATP-gated cation channel activity // not recorded /// 0004931 // extracellular ATP-gated cation channel activity // non-traceable author statement /// 0004931 // extracellular ATP-gated cation channel activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0015267 // channel activity // traceable author statement /// 0042802 // identical protein binding // inferred from physical interaction","chr22:21369463-21372950 (+) // 48.4 // q11.21"]
["11725583_at",0.1175313,0.064983845,-0.0701952,-0.064983845,0.17503929,-0.064983845,0.93824977,0.8296289,1.015659,0.022416074,1.015659,"up","FBXO10",26267,"0016567 // protein ubiquitination // non-traceable author statement","0000151 // ubiquitin ligase complex // non-traceable author statement","0004842 // ubiquitin-protein ligase activity // non-traceable author statement","chr9:37510888-37576367 (-) // 89.4 // p13.2"]
["11742851_x_at",-0.21783257,-0.11950302,-0.062212944,0.17680359,0.062212944,0.323781,0.17065476,0.022097537,-1.2490073,-0.32078195,1.2490073,"down","SPINT2",10653,"0006928 // cellular component movement // traceable author statement /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005625 // soluble fraction // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004866 // endopeptidase inhibitor activity // traceable author statement /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // traceable author statement /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr19:38754687-38783254 (+) // 55.71 // q13.2"]
["11717144_s_at",-0.33224487,-0.09589577,-0.05290699,0.05290699,0.20350647,0.19451618,0.21594375,0.035555635,-1.2402742,-0.31065908,1.2402742,"down","LANCL1",10314,"0007186 // G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // traceable author statement /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003824 // catalytic activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from direct assay /// 0017124 // SH3 domain binding // inferred from physical interaction /// 0043295 // glutathione binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050750 // low-density lipoprotein particle receptor binding // inferred from direct assay","chr2:211295655-211341491 (-) // 91.65 // q34"]
["11741172_a_at",-0.08528185,-0.23639703,0.2042222,-0.025020361,0.0250206,0.26267195,0.74741805,0.46434703,-1.0918008,-0.12670967,1.0918008,"down","CASS4",57091,"0000160 // two-component signal transduction system (phosphorelay) // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0000155 // two-component sensor activity // inferred from electronic annotation","chr20:54987301-55033947 (+) // 99.27 // q13.2"]
["11737026_at",-0.044917583,-0.06687403,0.044917583,-0.11139679,0.21252441,0.4722638,0.6034478,0.28308648,-1.1594349,-0.21342184,1.1594349,"down","IRX4",50805,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0007507 // heart development // traceable author statement /// 0048561 // establishment of organ orientation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr5:1877540-1882875 (-) // 92.5 // p15.33"]
["11748985_x_at",0.020979881,-0.08000183,-0.0019340515,0.023451328,0.0019340515,-0.010318756,0.75385755,0.4742758,-1.0177201,-0.02534084,1.0177201,"down","VTA1",51534,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0016197 // endosomal transport // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","","chr6:142468397-142540388 (+) // 99.78 // q24.1"]
["11731080_at",-0.24742985,0.0539515,-0.03660488,0.03660512,-0.15641975,0.31678343,0.72646415,0.43394795,-1.103702,-0.14235063,1.103702,"down","HCAR1",27198,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from direct assay","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation","chr12:123212152-123215129 (-) // 84.4 // q24.31"]
["11720010_s_at",0.04228449,0.14036036,0.05794525,-0.33729744,-0.04228449,-0.13465166,0.26339874,0.052631326,1.1905333,0.25160795,1.1905333,"up","JARID2",3720,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007417 // central nervous system development // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031061 // negative regulation of histone methylation // inferred from sequence or structural similarity /// 0031061 // negative regulation of histone methylation // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0048536 // spleen development // inferred from electronic annotation /// 0048538 // thymus development // inferred from electronic annotation /// 0048863 // stem cell differentiation // inferred from sequence or structural similarity /// 0048863 // stem cell differentiation // inferred from electronic annotation /// 0051574 // positive regulation of histone H3-K9 methylation // inferred from sequence or structural similarity /// 0051574 // positive regulation of histone H3-K9 methylation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0035097 // histone methyltransferase complex // inferred from sequence or structural similarity /// 0035097 // histone methyltransferase complex // inferred from electronic annotation /// 0035098 // ESC/E(Z) complex // inferred from direct assay /// 0035098 // ESC/E(Z) complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from sequence or structural similarity /// 0003682 // chromatin binding // inferred from electronic annotation /// 0032452 // histone demethylase activity // inferred from sequence or structural similarity","chr6:15246205-15522255 (+) // 95.56 // p22.3"]
["11735929_a_at",-0.04733324,-0.06559229,-0.056028843,0.3314004,0.37672234,0.04733324,0.23068061,0.040517967,-1.2381077,-0.3081368,1.2381077,"down","PRDM7",11105,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007128 // meiotic prophase I // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0010520 // regulation of reciprocal meiotic recombination // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016571 // histone methylation // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0034968 // histone lysine methylation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051568 // histone H3-K4 methylation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr16:90122975-90128733 (-) // 74.13 // q24.3"]
["11752305_a_at",0.025735855,-0.016101837,-0.0057229996,0.0057229996,0.14205551,-0.033154488,0.7935012,0.5361051,-1.0259101,-0.03690437,1.0259101,"down","PARPBP",55010,"0006281 // DNA repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 2000042 // negative regulation of double-strand break repair via homologous recombination // inferred from mutant phenotype","0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr12:102517765-102591139 (+) // 99.87 // q23.2"]
["11727075_at",-0.083097935,-0.17619991,0.19220257,-0.26533508,0.083097935,0.08705568,0.98512024,0.9563813,1.0065104,0.009362046,1.0065104,"up","PLAC4",191585,"","0019028 // viral capsid // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation","chr21:42547158-42551989 (-) // 27.4 // q22.2"]
["11757167_x_at",-0.11692047,-0.26404572,-0.0583539,0.13131428,0.06989908,0.058354378,0.17598784,0.023358159,-1.1752459,-0.23296262,1.1752459,"down","HSPA8 /// SNORD14C /// SNORD14D","3312 /// 85389 /// 85390","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006457 // protein folding // non-traceable author statement /// 0006457 // protein folding // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // non-traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016044 // cellular membrane organization // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0051085 // chaperone mediated protein folding requiring cofactor // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0061077 // chaperone-mediated protein folding // inferred from electronic annotation","0005622 // intracellular // non-traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0061202 // clathrin sculpted gamma-aminobutyric acid transport vesicle membrane // traceable author statement /// 0070062 // extracellular vesicular exosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0042623 // ATPase activity, coupled // non-traceable author statement /// 0042623 // ATPase activity, coupled // inferred from electronic annotation /// 0043531 // ADP binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr11:122929538-122929766 (-) // 61.84 // q24.1"]
["11719625_a_at",-0.06921291,-0.15415096,-0.068240166,0.21011066,0.12263775,0.068240166,0.11636918,0.0100290235,-1.1735377,-0.23086423,1.1735377,"down","CDC16",8881,"0000075 // cell cycle checkpoint // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007067 // mitosis // traceable author statement /// 0007088 // regulation of mitosis // traceable author statement /// 0007094 // mitotic cell cycle spindle assembly checkpoint // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005680 // anaphase-promoting complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // traceable author statement /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // traceable author statement /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005876 // spindle microtubule // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr13:115000361-115038150 (+) // 96.88 // q34"]
["11745746_a_at",0.21727848,0.026652336,0.003689766,-0.003689766,-0.065496445,-0.038360596,0.4674639,0.16612737,1.0855222,0.1183892,1.0855222,"up","AHCYL1",10768,"0006378 // mRNA polyadenylation // inferred from electronic annotation /// 0006611 // protein export from nucleus // inferred from electronic annotation /// 0006730 // one-carbon metabolic process // inferred from electronic annotation /// 0010765 // positive regulation of sodium ion transport // inferred from electronic annotation /// 0031440 // regulation of mRNA 3'-end processing // inferred from electronic annotation /// 0032412 // regulation of ion transmembrane transporter activity // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004013 // adenosylhomocysteinase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr1:110527421-110564996 (+) // 94.17 // p13.3"]
["11718491_x_at",0.05563259,0.005731106,-0.16747952,0.02572012,-0.005731106,-0.26397228,0.88543206,0.70744294,1.0323669,0.04595575,1.0323669,"up","FABP5",2171,"0006006 // glucose metabolic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // traceable author statement /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006656 // phosphatidylcholine biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0008544 // epidermis development // traceable author statement /// 0015758 // glucose transport // inferred from electronic annotation","0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0005504 // fatty acid binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // traceable author statement /// 0008289 // lipid binding // inferred from electronic annotation","chr8:82192597-82197012 (+) // 84.01 // q21.13"]
["11756650_a_at",-0.3365507,0.0017623901,0.034168243,-0.16095829,-0.0017623901,0.11974621,0.820343,0.5823364,-1.0613363,-0.08588184,1.0613363,"down","CHP1",11261,"0001578 // microtubule bundle formation // inferred from sequence or structural similarity /// 0001933 // negative regulation of protein phosphorylation // inferred from sequence or structural similarity /// 0006469 // negative regulation of protein kinase activity // inferred from sequence or structural similarity /// 0006611 // protein export from nucleus // inferred from sequence or structural similarity /// 0006813 // potassium ion transport // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0010923 // negative regulation of phosphatase activity // inferred from direct assay /// 0017156 // calcium ion-dependent exocytosis // inferred from electronic annotation /// 0022406 // membrane docking // inferred from sequence or structural similarity /// 0031122 // cytoplasmic microtubule organization // inferred from sequence or structural similarity /// 0031397 // negative regulation of protein ubiquitination // inferred from sequence or structural similarity /// 0031953 // negative regulation of protein autophosphorylation // inferred from sequence or structural similarity /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0032417 // positive regulation of sodium:hydrogen antiporter activity // inferred from direct assay /// 0032417 // positive regulation of sodium:hydrogen antiporter activity // inferred from sequence or structural similarity /// 0042308 // negative regulation of protein import into nucleus // inferred from direct assay /// 0045056 // transcytosis // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from sequence or structural similarity /// 0051222 // positive regulation of protein transport // inferred from sequence or structural similarity /// 0051453 // regulation of intracellular pH // inferred from direct assay /// 0060050 // positive regulation of protein glycosylation // inferred from sequence or structural similarity /// 0061024 // membrane organization // inferred from sequence or structural similarity /// 0061025 // membrane fusion // inferred from sequence or structural similarity /// 0070885 // negative regulation of calcineurin-NFAT signaling cascade // inferred from direct assay /// 0071468 // cellular response to acidity // inferred from sequence or structural similarity /// 0090314 // positive regulation of protein targeting to membrane // inferred from sequence or structural similarity","0000139 // Golgi membrane // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from sequence or structural similarity /// 0030133 // transport vesicle // inferred from sequence or structural similarity","0005215 // transporter activity // inferred from sequence or structural similarity /// 0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from sequence or structural similarity /// 0015459 // potassium channel regulator activity // traceable author statement /// 0019900 // kinase binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048306 // calcium-dependent protein binding // inferred from direct assay","chr15:41523337-41571917 (+) // 96.98 // q15.1"]
["11725339_at",-0.054178715,-0.22273827,0.08387375,0.01245451,0.0031843185,-0.0031838417,0.7605912,0.48339292,-1.0486253,-0.06849933,1.0486253,"down","NOL12",79159,"","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0019843 // rRNA binding // inferred from electronic annotation","chr22:38082329-38089479 (+) // 78.8 // q13.1"]
["11725578_at",0.13171673,0,0.095261574,0,-0.0062203407,-0.26042366,0.45357886,0.15611446,1.1208092,0.1645407,1.1208092,"up","BEND3",57673,"","","","chr6:107386383-107435636 (-) // 98.39 // q21"]
["11724350_s_at",-0.11981583,-0.13040113,0.063176155,-0.0009875298,0.25691223,0.0009875298,0.5545653,0.23598938,-1.1080203,-0.14798433,1.1080203,"down","PPP1R14C",81706,"0042325 // regulation of phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004864 // protein phosphatase inhibitor activity // inferred from electronic annotation /// 0004865 // protein serine/threonine phosphatase inhibitor activity // inferred from electronic annotation","chr6:150463685-150571528 (+) // 94.26 // q25.1"]
["11732609_s_at",0.3085165,0.077102184,-0.30536222,0.30074072,-0.077102184,-0.21965647,0.9716874,0.9197158,1.0177794,0.025424825,1.0177794,"up","LOC100653178 /// NBPF3","100653178 /// 84224","","0005737 // cytoplasm // inferred from electronic annotation","","chr1:21766629-21811392 (+) // 83.39 // p36.12"]
["11753223_a_at",0.052467585,0.03090477,-0.11031985,-0.052467585,0.05154562,-0.03090477,0.9925527,0.97970283,1.001128,0.0016263827,1.001128,"up","ST8SIA2",8128,"0001574 // ganglioside biosynthetic process // inferred from direct assay /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006464 // cellular protein modification process // traceable author statement /// 0006486 // protein glycosylation // inferred from direct assay /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006491 // N-glycan processing // inferred from direct assay /// 0007399 // nervous system development // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0009311 // oligosaccharide metabolic process // inferred from direct assay /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030173 // integral to Golgi membrane // inferred from electronic annotation","0003828 // alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity // inferred from direct assay /// 0003828 // alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity // inferred from electronic annotation /// 0008373 // sialyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0033691 // sialic acid binding // inferred by curator","chr15:92937270-93007615 (+) // 99.91 // q26.1"]
["11754909_a_at",-0.005337715,0.005337715,0.05117917,-0.11028552,0.19034171,-0.116527796,0.9216082,0.7902331,1.0204581,0.029216949,1.0204581,"up","C2orf88",84281,"","0005576 // extracellular region // inferred from electronic annotation","","chr2:191045164-191064935 (+) // 95.76 // q32.2"]
["11743064_at",0.0015287399,0.05804348,0.06736851,-0.028356552,-0.0033864975,-0.0015287399,0.31434315,0.07489829,1.0377107,0.05340425,1.0377107,"up","CDC6",990,"0000075 // cell cycle checkpoint // traceable author statement /// 0000076 // DNA replication checkpoint // traceable author statement /// 0000079 // regulation of cyclin-dependent protein kinase activity // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000083 // regulation of transcription involved in G1/S phase of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007089 // traversing start control point of mitotic cell cycle // traceable author statement /// 0008156 // negative regulation of DNA replication // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051984 // positive regulation of chromosome segregation // inferred from direct assay /// 0071777 // positive regulation of cell cycle cytokinesis // inferred from mutant phenotype /// 0090007 // regulation of mitotic anaphase // inferred from mutant phenotype","0000922 // spindle pole // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0051233 // spindle midzone // inferred from direct assay","0000166 // nucleotide binding // traceable author statement /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0019900 // kinase binding // inferred from physical interaction","chr17:38443861-38459413 (+) // 89.9 // q21.2"]
["11721527_a_at",0.51215124,0.056906223,-0.058706284,0.27148724,-0.22945929,-0.056905746,0.7614828,0.48523712,1.1290241,0.17507634,1.1290241,"up","PROSER1",80209,"","","","chr13:39584001-39612252 (-) // 99.58 // q13.3"]
["11763313_at",0.10079718,0.079582214,0.1536398,-0.29222727,-0.13701439,-0.079582214,0.13580947,0.013923886,1.2149928,0.28094772,1.2149928,"up","SEPHS1",22929,"0006464 // cellular protein modification process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004756 // selenide, water dikinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // traceable author statement /// 0005525 // GTP binding // traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr10:13359427-13379583 (-) // 89.04 // p13"]
["11760518_at",0.11115265,-0.3134327,-0.023470879,0.023470879,-0.023470879,0.09558058,0.74208546,0.45616996,-1.0770689,-0.107110575,1.0770689,"down","SEC11C",90701,"0006112 // energy reserve metabolic process // traceable author statement /// 0006412 // translation // traceable author statement /// 0006465 // signal peptide processing // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr18:56807097-56824178 (+) // 77.11 // q21.32"]
["11727458_at",0.0074710846,-0.0074710846,0.045209885,0.035365105,-0.17819595,-0.21643448,0.46829486,0.16677345,1.0979596,0.13482502,1.0979596,"up","KIF18A",81930,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007018 // microtubule-based movement // traceable author statement /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0007019 // microtubule depolymerization // inferred from direct assay /// 0007080 // mitotic metaphase plate congression // inferred from direct assay /// 0007596 // blood coagulation // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation","0001726 // ruffle // inferred from direct assay /// 0001726 // ruffle // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005828 // kinetochore microtubule // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005901 // caveola // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003777 // microtubule motor activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008017 // microtubule binding // inferred from direct assay /// 0008574 // plus-end-directed microtubule motor activity // inferred from direct assay /// 0043130 // ubiquitin binding // inferred from direct assay /// 0051010 // microtubule plus-end binding // inferred from direct assay /// 0070463 // tubulin-dependent ATPase activity // inferred from direct assay","chr11:28042165-28129855 (-) // 98.33 // p14.1"]
["11717689_a_at",0.014073372,-0.0052661896,0.028936386,0.0052661896,-0.039749146,-0.040922165,0.37537947,0.106180824,1.0264876,0.037716184,1.0264876,"up","RNF19A",25897,"0000226 // microtubule cytoskeleton organization // traceable author statement /// 0006464 // cellular protein modification process // non-traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // traceable author statement /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008134 // transcription factor binding // traceable author statement /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:101269294-101322394 (-) // 97.68 // q22.2"]
["11747102_a_at",-0.30197287,0.01262188,0.08418846,-0.14055347,-0.01262188,0.18834448,0.845107,0.6269481,-1.057099,-0.080110475,1.057099,"down","SEC1P",653677,"0005975 // carbohydrate metabolic process // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation","0008107 // galactoside 2-alpha-L-fucosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr19:49141355-49185081 (+) // 80.42 // q13.33"]
["11741025_a_at",0.21343994,0.05970192,-0.13676834,0.10088062,-0.05970192,-0.06731653,0.8634598,0.6627728,1.0382619,0.054170392,1.0382619,"up","PIP5K1A",8394,"0006650 // glycerophospholipid metabolic process // traceable author statement /// 0006909 // phagocytosis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0008654 // phospholipid biosynthetic process // inferred from direct assay /// 0010761 // fibroblast migration // inferred from electronic annotation /// 0016310 // phosphorylation // non-traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // non-traceable author statement /// 0030216 // keratinocyte differentiation // traceable author statement /// 0031532 // actin cytoskeleton reorganization // inferred from mutant phenotype /// 0032863 // activation of Rac GTPase activity // inferred from mutant phenotype /// 0046488 // phosphatidylinositol metabolic process // inferred from electronic annotation /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation /// 0048041 // focal adhesion assembly // inferred from mutant phenotype /// 0060326 // cell chemotaxis // inferred from mutant phenotype /// 0072661 // protein targeting to plasma membrane // inferred from mutant phenotype /// 0097178 // ruffle assembly // inferred from mutant phenotype","0001726 // ruffle // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005847 // mRNA cleavage and polyadenylation specificity factor complex // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0016607 // nuclear speck // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from direct assay /// 0032587 // ruffle membrane // inferred from direct assay /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016307 // phosphatidylinositol phosphate kinase activity // inferred from electronic annotation /// 0016308 // 1-phosphatidylinositol-4-phosphate 5-kinase activity // inferred from direct assay /// 0016308 // 1-phosphatidylinositol-4-phosphate 5-kinase activity // traceable author statement /// 0016308 // 1-phosphatidylinositol-4-phosphate 5-kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0019900 // kinase binding // inferred from direct assay","chr1:151171019-151222006 (+) // 99.49 // q21.3"]
["11721685_at",-0.07958794,-0.02439642,0.02439642,-0.03312874,0.15287542,0.1095953,0.48763928,0.18137279,-1.0739871,-0.1029767,1.0739871,"down","CCL19",6363,"0001768 // establishment of T cell polarity // inferred from direct assay /// 0001771 // immunological synapse formation // inferred from sequence or structural similarity /// 0002407 // dendritic cell chemotaxis // inferred from direct assay /// 0002408 // myeloid dendritic cell chemotaxis // inferred from direct assay /// 0002606 // positive regulation of dendritic cell antigen processing and presentation // inferred from sequence or structural similarity /// 0006874 // cellular calcium ion homeostasis // traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0006954 // inflammatory response // non-traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0007154 // cell communication // traceable author statement /// 0007257 // activation of JUN kinase activity // inferred from sequence or structural similarity /// 0009615 // response to virus // traceable author statement /// 0010560 // positive regulation of glycoprotein biosynthetic process // inferred from sequence or structural similarity /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0031295 // T cell costimulation // inferred from sequence or structural similarity /// 0032320 // positive regulation of Ras GTPase activity // inferred from sequence or structural similarity /// 0032735 // positive regulation of interleukin-12 production // inferred from sequence or structural similarity /// 0032760 // positive regulation of tumor necrosis factor production // inferred from sequence or structural similarity /// 0034695 // response to prostaglandin E stimulus // inferred from direct assay /// 0042102 // positive regulation of T cell proliferation // inferred from sequence or structural similarity /// 0042346 // positive regulation of NF-kappaB import into nucleus // inferred from direct assay /// 0043089 // positive regulation of Cdc42 GTPase activity // inferred from sequence or structural similarity /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from direct assay /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from direct assay /// 0045627 // positive regulation of T-helper 1 cell differentiation // inferred from sequence or structural similarity /// 0045807 // positive regulation of endocytosis // inferred from sequence or structural similarity /// 0045860 // positive regulation of protein kinase activity // inferred from direct assay /// 0046330 // positive regulation of JNK cascade // inferred from direct assay /// 0048260 // positive regulation of receptor-mediated endocytosis // inferred from sequence or structural similarity /// 0048469 // cell maturation // inferred from sequence or structural similarity /// 0050718 // positive regulation of interleukin-1 beta secretion // inferred from sequence or structural similarity /// 0050921 // positive regulation of chemotaxis // inferred from sequence or structural similarity /// 0051209 // release of sequestered calcium ion into cytosol // inferred from direct assay /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from direct assay /// 0060491 // regulation of cell projection assembly // inferred from sequence or structural similarity /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0071731 // response to nitric oxide // inferred from direct assay /// 0072610 // interleukin-12 secretion // inferred from sequence or structural similarity /// 0090023 // positive regulation of neutrophil chemotaxis // inferred from direct assay /// 0097029 // mature dendritic cell differentiation // inferred from sequence or structural similarity /// 2000107 // negative regulation of leukocyte apoptotic process // inferred from direct assay /// 2000147 // positive regulation of cell motility // inferred from direct assay /// 2000549 // positive regulation of dendritic cell dendrite assembly // inferred from sequence or structural similarity","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0008009 // chemokine activity // inferred from direct assay /// 0008009 // chemokine activity // inferred from electronic annotation /// 0031732 // CCR7 chemokine receptor binding // inferred from sequence or structural similarity /// 0031735 // CCR10 chemokine receptor binding // inferred from direct assay /// 0048020 // CCR chemokine receptor binding // inferred from physical interaction","chr9:34689559-34691326 (-) // 94.4 // p13.3"]
["11733504_at",-0.07414913,0.107562065,-0.0009937286,-0.090239525,0.0009937286,0.016126633,0.83199096,0.60285026,1.0246843,0.035179503,1.0246843,"up","GPR182",11318,"0001666 // response to hypoxia // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0001605 // adrenomedullin receptor activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation","chr12:57388229-57390541 (+) // 100.0 // q13.3"]
["11751371_a_at",0.15474701,-0.10400772,0.05780983,0.060813904,-0.05780983,-0.20775604,0.69464886,0.38960525,1.0750723,0.10443367,1.0750723,"up","TP73",7161,"0000122 // negative regulation of transcription from RNA polymerase II promoter // not recorded /// 0000187 // activation of MAPK activity // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001836 // release of cytochrome c from mitochondria // inferred from electronic annotation /// 0006298 // mismatch repair // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0006978 // DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator // not recorded /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0008630 // DNA damage response, signal transduction resulting in induction of apoptosis // traceable author statement /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0010165 // response to X-ray // not recorded /// 0010243 // response to organic nitrogen // inferred from electronic annotation /// 0010332 // response to gamma radiation // not recorded /// 0021766 // hippocampus development // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0031571 // mitotic cell cycle G1/S transition DNA damage checkpoint // not recorded /// 0033326 // cerebrospinal fluid secretion // inferred from electronic annotation /// 0034644 // cellular response to UV // not recorded /// 0042771 // DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis // not recorded /// 0042771 // DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043508 // negative regulation of JUN kinase activity // not recorded /// 0043508 // negative regulation of JUN kinase activity // inferred from electronic annotation /// 0043523 // regulation of neuron apoptotic process // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // not recorded /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045793 // positive regulation of cell size // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048546 // digestive tract morphogenesis // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation /// 0048714 // positive regulation of oligodendrocyte differentiation // inferred from electronic annotation /// 0051262 // protein tetramerization // inferred from electronic annotation","0000785 // chromatin // not recorded /// 0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // not recorded /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // not recorded","0002039 // p53 binding // not recorded /// 0002039 // p53 binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // not recorded /// 0003684 // damaged DNA binding // not recorded /// 0003690 // double-stranded DNA binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:3644041-3649931 (+) // 100.0 // p36.32"]
["11763248_x_at",-0.13943768,-0.11108589,-0.20817661,0.21943665,0.11108589,0.16166115,0.0523178,0.0017350977,-1.2457039,-0.31696123,1.2457039,"down","EIF4EBP1",1978,"0000082 // G1/S transition of mitotic cell cycle // inferred from mutant phenotype /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0017148 // negative regulation of translation // inferred from electronic annotation /// 0031333 // negative regulation of protein complex assembly // inferred from electronic annotation /// 0031929 // TOR signaling cascade // inferred from direct assay /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045931 // positive regulation of mitotic cell cycle // inferred from mutant phenotype /// 0045947 // negative regulation of translational initiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0043234 // protein complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008190 // eukaryotic initiation factor 4E binding // inferred from electronic annotation /// 0031369 // translation initiation factor binding // inferred from electronic annotation","chr8:37888061-37917774 (+) // 97.02 // p11.23"]
["11719801_a_at",0.28808498,0.010336876,-0.010336876,0.109485626,-0.2542038,-0.35114288,0.5104849,0.19916591,1.198571,0.26131532,1.198571,"up","C6orf62",81688,"","0005622 // intracellular // inferred from direct assay","","chr6:24704281-24721153 (-) // 87.43 // p22.3"]
["11738507_at",-0.50232697,-0.013050079,0.316072,-0.067587376,0.013050079,0.12814355,0.8948778,0.72865653,-1.0650864,-0.09097042,1.0650864,"down","INSL5",10022,"","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation","0005179 // hormone activity // non-traceable author statement /// 0005179 // hormone activity // inferred from electronic annotation","chr1:67263423-67266939 (-) // 98.21 // p31.3"]
["11732394_at",-0.5335474,-0.011567116,0.15280104,-0.5450282,0.011567116,0.1405425,0.99977064,0.9994873,1.0001398,0.00020172154,1.0001398,"up","CLDN22 /// WWC2","53842 /// 80014","0016338 // calcium-independent cell-cell adhesion // inferred from sequence or structural similarity /// 0034329 // cell junction assembly // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement /// 0070830 // tight junction assembly // traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from sequence or structural similarity","chr4:184020445-184241927 (+) // 98.19 // q35.1"]
["11732171_x_at",-0.18828392,-0.35786915,-0.24832201,0.7115321,0.5112529,0.18828392,0.11712553,0.010136889,-1.6646067,-0.73518133,1.6646067,"down","GRSF1",2926,"0006378 // mRNA polyadenylation // traceable author statement /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0016331 // morphogenesis of embryonic epithelium // inferred from electronic annotation","0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // traceable author statement","chr4:71682122-71705607 (-) // 69.33 // q13.3"]
["11727345_s_at",0.33351135,-0.10815334,-0.17798042,0.25271797,0.10815334,-0.11152077,0.9020206,0.7435111,-1.0477717,-0.06732439,1.0477717,"down","FBLN1",2192,"0007566 // embryo implantation // inferred from electronic annotation /// 0010952 // positive regulation of peptidase activity // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // traceable author statement /// 0005625 // soluble fraction // traceable author statement /// 0031012 // extracellular matrix // inferred from direct assay","0005201 // extracellular matrix structural constituent // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0016504 // peptidase activator activity // inferred from electronic annotation","chr22:45898711-45997073 (+) // 98.35 // q13.31"]
["11754838_a_at",-0.15941572,-0.100783825,0.21827722,-0.043058634,0.10827184,0.043058634,0.88624316,0.7098289,-1.0353113,-0.050064683,1.0353113,"down","DSC3",1825,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005911 // cell-cell junction // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030057 // desmosome // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation /// 0045295 // gamma-catenin binding // inferred from physical interaction","chr18:28569973-28571896 (-) // 53.33 // q12.1"]
["11736058_s_at",-0.06130743,-0.026556969,0.0072393417,0.168643,0.067286015,-0.0072393417,0.4189275,0.13239957,-1.0740826,-0.103104964,1.0740826,"down","C10orf32",119032,"","","","chr10:104613966-104624718 (+) // 84.91 // q24.32"]
["11730969_at",-0.1288948,0.01783657,-0.036520958,-0.01783657,0.25104046,0.18488312,0.37883097,0.10843539,-1.139622,-0.18855534,1.139622,"down","THAP2",83591,"","0005730 // nucleolus // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:72057676-72074427 (+) // 91.12 // q21.1"]
["11730155_a_at",-0.21525812,0.056972504,0.09444523,-0.37565374,-0.056972504,0.19740343,0.9173888,0.7812709,1.0403922,0.05712743,1.0403922,"up","SGCD",6444,"0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007517 // muscle organ development // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016010 // dystrophin-associated glycoprotein complex // inferred from direct assay /// 0016012 // sarcoglycan complex // inferred from electronic annotation /// 0016012 // sarcoglycan complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation","","chr5:155753766-156185068 (+) // 98.74 // q33.3"]
["11749683_a_at",0.21687794,-0.072815895,0.035466194,-0.0044841766,0.0044841766,-0.116892815,0.66260487,0.3483683,1.0708876,0.098807015,1.0708876,"up","COL4A3BP",10087,"0000902 // cell morphogenesis // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0003007 // heart morphogenesis // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006672 // ceramide metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0006936 // muscle contraction // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement /// 0007029 // endoplasmic reticulum organization // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0034976 // response to endoplasmic reticulum stress // inferred from electronic annotation /// 0035621 // ER to Golgi ceramide transport // inferred from genetic interaction /// 0035621 // ER to Golgi ceramide transport // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0055088 // lipid homeostasis // inferred from electronic annotation /// 0070584 // mitochondrion morphogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0004672 // protein kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0035620 // ceramide transporter activity // inferred from direct assay /// 0070273 // phosphatidylinositol-4-phosphate binding // inferred from direct assay /// 0097001 // ceramide binding // inferred from direct assay","chr5:74674856-74807440 (-) // 92.3 // q13.3"]
["11735598_a_at",-0.15931702,0.057519436,-0.05817318,-0.05751896,0.0721221,0.3900652,0.5889684,0.26956975,-1.1393516,-0.18821304,1.1393516,"down","FLJ43860",389690,"","","","chr8:142443928-142517330 (-) // 99.98 // q24.3"]
["11739619_a_at",0.116710186,0.0023674965,-0.08285427,-0.045018196,0.011742115,-0.0023674965,0.8866686,0.7113549,1.0167434,0.023955656,1.0167434,"up","PTPN3",5774,"0006470 // protein dephosphorylation // inferred from direct assay /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006470 // protein dephosphorylation // traceable author statement /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from direct assay /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0045930 // negative regulation of mitotic cell cycle // inferred from direct assay /// 0051045 // negative regulation of membrane protein ectodomain proteolysis // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009898 // internal side of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0001784 // phosphotyrosine binding // inferred from physical interaction /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0051117 // ATPase binding // inferred from physical interaction","chr9:112137977-112191323 (-) // 87.6 // q31.3"]
["11731661_s_at",0.34540844,0.088875294,0.07948494,-0.12129879,-0.16953516,-0.07948494,0.2040633,0.031636328,1.2266264,0.29469588,1.2266264,"up","DBP",1628,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048511 // rhythmic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr19:49133817-49140639 (-) // 92.95 // q13.33"]
["11763430_at",-0.05701399,0.1906786,0.14124298,-0.15902424,-0.03776312,0.03776312,0.5149649,0.20228724,1.1054578,0.14464393,1.1054578,"up","LOC100131822",100131822,"","","","chr17:35881152-35884427 (-) // 29.56 // q12"]
["11733254_a_at",0.015865326,0.010612011,0.036919594,-0.0263381,-0.16013193,-0.010612011,0.43880612,0.14545141,1.0620313,0.08682624,1.0620313,"up","FXYD3",5349,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // traceable author statement /// 0006821 // chloride transport // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // inferred from electronic annotation","0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0034707 // chloride channel complex // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // traceable author statement /// 0051117 // ATPase binding // inferred from electronic annotation","chr19:35606533-35615226 (+) // 93.17 // q13.12"]
["11721575_at",0.0873518,0.073241234,0.08074856,-0.1662693,-0.11692619,-0.073241234,0.053475764,0.0018423211,1.1481088,0.19925942,1.1481088,"up","C1orf131",128061,"","","","chr1:231359508-231377209 (-) // 97.01 // q42.2"]
["11741500_a_at",0.0899539,-0.005253315,-0.23215389,0.048286915,0.005252838,-0.006104946,0.79552054,0.53957534,-1.0460579,-0.06496276,1.0460579,"down","DAGLB",221955,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004806 // triglyceride lipase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:6448746-6487643 (-) // 99.96 // p22.1"]
["11757092_s_at",-0.07797241,-0.043486595,-0.016836166,0.097784996,0.022028923,0.016836166,0.24085538,0.04404101,-1.065587,-0.091648445,1.065587,"down","LSM3",27258,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr3:14220333-14239843 (+) // 96.81 // p25.1"]
["11748689_a_at",-0.37206507,0.23035479,0.050732613,-0.5180311,-0.050732613,0.1554017,0.8856757,0.7084555,1.077331,0.1074615,1.077331,"up","GNA13",10672,"0001525 // angiogenesis // inferred from electronic annotation /// 0001569 // patterning of blood vessels // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006184 // GTP catabolic process // not recorded /// 0006184 // GTP catabolic process // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway // not recorded /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0007266 // Rho protein signal transduction // not recorded /// 0007266 // Rho protein signal transduction // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030168 // platelet activation // inferred from electronic annotation /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0031584 // activation of phospholipase D activity // not recorded","0005834 // heterotrimeric G-protein complex // not recorded /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031234 // extrinsic to internal side of plasma membrane // not recorded /// 0031526 // brush border membrane // not recorded /// 0042470 // melanosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // not recorded /// 0003924 // GTPase activity // traceable author statement /// 0004871 // signal transducer activity // not recorded /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // not recorded /// 0031702 // type 1 angiotensin receptor binding // not recorded /// 0031752 // D5 dopamine receptor binding // not recorded /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:63009905-63051892 (-) // 100.0 // q24.1"]
["11748930_a_at",-0.33029556,0.045488358,-0.040582657,-0.27708244,0.040582657,0.17888165,0.85148597,0.6395873,-1.0638224,-0.0892573,1.0638224,"down","PGAM5 /// PXMP2","192111 /// 5827","","0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005777 // peroxisome // inferred from electronic annotation /// 0005778 // peroxisomal membrane // inferred from direct assay /// 0005778 // peroxisomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation","chr12:133264634-133308796 (+) // 89.34 // q24.33"]
["11745960_a_at",0.13594246,0.036467552,-0.035102367,0.0014486313,-0.05810404,-0.0014481544,0.60823095,0.28837058,1.0461843,0.06513703,1.0461843,"up","GTPBP5",26164,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr20:60768470-60778622 (+) // 84.98 // q13.33"]
["11745717_x_at",0.21853065,0.005084038,-0.005084038,0.26080132,-0.013053894,-0.083589554,0.96266884,0.89412534,1.012642,0.018124264,1.012642,"up","HMGB1",3146,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001773 // myeloid dendritic cell activation // inferred from sequence or structural similarity /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0002407 // dendritic cell chemotaxis // inferred from sequence or structural similarity /// 0002437 // inflammatory response to antigenic stimulus // inferred from expression pattern /// 0006265 // DNA topological change // inferred from sequence or structural similarity /// 0006288 // base-excision repair, DNA ligation // inferred from direct assay /// 0006309 // apoptotic DNA fragmentation // traceable author statement /// 0006310 // DNA recombination // inferred from sequence or structural similarity /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0008156 // negative regulation of DNA replication // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009408 // response to heat // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0010942 // positive regulation of cell death // inferred from electronic annotation /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0014911 // positive regulation of smooth muscle cell migration // inferred from electronic annotation /// 0017055 // negative regulation of RNA polymerase II transcriptional preinitiation complex assembly // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0031532 // actin cytoskeleton reorganization // inferred from electronic annotation /// 0032392 // DNA geometric change // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0033034 // positive regulation of myeloid cell apoptotic process // inferred from electronic annotation /// 0033151 // V(D)J recombination // inferred from direct assay /// 0034341 // response to interferon-gamma // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043388 // positive regulation of DNA binding // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045663 // positive regulation of myoblast differentiation // inferred from electronic annotation /// 0045931 // positive regulation of mitotic cell cycle // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0050727 // regulation of inflammatory response // inferred from electronic annotation /// 0050831 // male-specific defense response to bacterium // inferred from electronic annotation /// 0050918 // positive chemotaxis // inferred from sequence or structural similarity /// 0050930 // induction of positive chemotaxis // inferred from electronic annotation /// 0051103 // DNA ligation involved in DNA repair // inferred from sequence or structural similarity /// 0051450 // myoblast proliferation // inferred from electronic annotation /// 0071347 // cellular response to interleukin-1 // inferred from electronic annotation","0000793 // condensed chromosome // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0017053 // transcriptional repressor complex // inferred from direct assay","0000400 // four-way junction DNA binding // inferred from electronic annotation /// 0000401 // open form four-way junction DNA binding // inferred from electronic annotation /// 0000402 // crossed form four-way junction DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003681 // bent DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // inferred from sequence or structural similarity /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from sequence or structural similarity /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from sequence or structural similarity /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005125 // cytokine activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0008097 // 5S rRNA binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0008301 // DNA binding, bending // inferred from electronic annotation /// 0008301 // DNA binding, bending // inferred from mutant phenotype /// 0008301 // DNA binding, bending // inferred from sequence or structural similarity /// 0042056 // chemoattractant activity // inferred from sequence or structural similarity /// 0042277 // peptide binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation /// 0050786 // RAGE receptor binding // inferred from electronic annotation /// 0050786 // RAGE receptor binding // inferred from sequence or structural similarity /// 0051861 // glycolipid binding // inferred from electronic annotation /// 0070491 // repressing transcription factor binding // inferred from physical interaction","chr13:31034640-31040073 (-) // 79.67 // q12.3"]
["11728809_a_at",0.1640029,0.00057935715,0.18230677,-0.025620937,-0.000579834,-0.11440182,0.31022793,0.073200956,1.1192228,0.16249721,1.1192228,"up","COL8A1",1295,"0001525 // angiogenesis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0010811 // positive regulation of cell-substrate adhesion // inferred from electronic annotation /// 0048593 // camera-type eye morphogenesis // inferred from electronic annotation /// 0050673 // epithelial cell proliferation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005591 // collagen type VIII // traceable author statement /// 0005604 // basement membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay","","chr3:99357318-99516308 (+) // 92.8 // q12.1"]
["11738305_at",0.0076503754,0.16387796,-0.19481993,-0.21388483,-0.0076503754,0.18443012,0.99205405,0.9777165,1.0031967,0.004604531,1.0031967,"up","VAX1",11023,"0001764 // neuron migration // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007406 // negative regulation of neuroblast proliferation // inferred from electronic annotation /// 0007411 // axon guidance // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0043010 // camera-type eye development // inferred from electronic annotation /// 0060021 // palate development // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0000976 // transcription regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0031490 // chromatin DNA binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr10:118888031-118897812 (-) // 85.65 // q25.3"]
["11730439_a_at",-0.062260628,-0.028244019,-0.109885216,0.18938828,0.081599236,0.028244019,0.21367058,0.034731243,-1.1223639,-0.16654055,1.1223639,"down","AKAP9",10142,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006810 // transport // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation","0000242 // pericentriolar material // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // traceable author statement /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation","0005102 // receptor binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation","chr7:91570181-91739989 (+) // 97.67 // q21.2"]
["11724161_a_at",0.23454809,0.3602438,0.2665038,-0.24688148,-0.23454762,-0.44011927,0.048889965,0.0014807043,1.5097203,0.5942813,1.5097203,"up","GXYLT1",283464,"0016266 // O-glycan processing // inferred from direct assay","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016763 // transferase activity, transferring pentosyl groups // inferred from electronic annotation /// 0035252 // UDP-xylosyltransferase activity // inferred from direct assay","chr12:42475646-42538673 (-) // 87.68 // q12"]
["11754442_x_at",-0.100652695,-0.018154144,0.08138418,-0.1466198,0.23378134,0.018154144,0.88912755,0.7165601,-1.0335294,-0.04757943,1.0335294,"down","ELN",2006,"0007585 // respiratory gaseous exchange // traceable author statement /// 0008015 // blood circulation // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0009887 // organ morphogenesis // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // traceable author statement","0005201 // extracellular matrix structural constituent // traceable author statement /// 0005201 // extracellular matrix structural constituent // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030023 // extracellular matrix constituent conferring elasticity // non-traceable author statement","chr7:73442096-73484234 (+) // 89.38 // q11.23"]
["11737592_at",-0.01211524,0.5883274,0.2612784,0.012115002,-0.07075477,-0.11351895,0.41581184,0.13073303,1.2627331,0.33654973,1.2627331,"up","EYS",346007,"0007601 // visual perception // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr6:64429875-66417118 (-) // 95.74 // q12"]
["11715948_at",-0.13433838,-0.2593689,-0.09634495,0.3707714,0.4512453,0.09634495,0.14789446,0.016503578,-1.384602,-0.46947128,1.384602,"down","KCTD12",115207,"0051260 // protein homooligomerization // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","","chr13:77454306-77460540 (-) // 96.41 // q22.3"]
["11744216_at",0.20454407,0.13213253,0.19328594,-0.132133,-0.31109953,-0.27577257,0.057035517,0.0021503079,1.3345215,0.4163226,1.3345215,"up","C15orf57",90416,"","","","chr15:40845008-40857252 (-) // 95.3 // q15.1"]
["11741562_a_at",-0.0583601,0.16675043,-0.018445492,-0.013765812,0.013765812,0.09562063,0.99323064,0.9815108,-1.0013123,-0.0018919439,1.0013123,"down","MME",4311,"0001822 // kidney development // inferred from expression pattern /// 0006508 // proteolysis // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0006518 // peptide metabolic process // inferred from sequence or structural similarity /// 0006518 // peptide metabolic process // inferred from electronic annotation /// 0019233 // sensory perception of pain // inferred from sequence or structural similarity /// 0019233 // sensory perception of pain // inferred from electronic annotation /// 0046449 // creatinine metabolic process // inferred from mutant phenotype /// 0050435 // beta-amyloid metabolic process // inferred from sequence or structural similarity /// 0050435 // beta-amyloid metabolic process // inferred from electronic annotation /// 0071345 // cellular response to cytokine stimulus // inferred from direct assay /// 0071492 // cellular response to UV-A // inferred from direct assay /// 0071493 // cellular response to UV-B // inferred from direct assay /// 0090399 // replicative senescence // inferred from expression pattern","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0005903 // brush border // inferred from direct assay /// 0008021 // synaptic vesicle // inferred from sequence or structural similarity /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from sequence or structural similarity /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0044306 // neuron projection terminus // inferred from sequence or structural similarity /// 0044306 // neuron projection terminus // inferred from electronic annotation /// 0045202 // synapse // inferred from sequence or structural similarity /// 0045202 // synapse // inferred from electronic annotation","0004175 // endopeptidase activity // inferred from direct assay /// 0004175 // endopeptidase activity // inferred from mutant phenotype /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042277 // peptide binding // inferred from sequence or structural similarity /// 0042277 // peptide binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:154797644-154901518 (+) // 88.71 // q25.2"]
["11738243_at",-0.06147194,0.022798538,-0.022798538,-0.08522606,0.21059942,0.22602272,0.57667243,0.25693935,-1.1000909,-0.13762268,1.1000909,"down","C17orf82",388407,"","","","chr17:59489111-59490641 (+) // 98.58 // q23.2"]
["11753459_x_at",-0.049131393,-0.07344818,-0.08305931,0.10251522,0.09690857,0.049131393,0.04944276,0.0015473107,-1.1106452,-0.15139799,1.1106452,"down","HNRNPA1",3178,"0000380 // alternative nuclear mRNA splicing, via spliceosome // inferred from electronic annotation /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006405 // RNA export from nucleus // inferred by curator /// 0006405 // RNA export from nucleus // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation /// 0051168 // nuclear export // inferred from direct assay /// 0051170 // nuclear import // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030530 // heterogeneous nuclear ribonucleoprotein complex // traceable author statement /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from direct assay /// 0003723 // RNA binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003727 // single-stranded RNA binding // inferred by curator","chr13:53216568-53217622 (+) // 78.65 // q14.3 /// chr12:54674531-54678360 (+) // 91.13 // q13.13 /// chr16:51679668-51680723 (+) // 79.58 // q12.1 /// chr2:201927751-201928806 (+) // 78.3 // q33.1 /// chr18:29992144-29993199 (-) // 79.7 // q12.1 /// chr19:11776851-11777904 (-) // 79.7 // p13.2 /// chr5:79654863-79655918 (-) // 77.36 // q14.1"]
["11725278_at",0.012095928,-0.012095928,-0.073506355,-0.012095928,0.2586093,0.21613884,0.3845931,0.111603156,-1.1318789,-0.17871955,1.1318789,"down","IHH",3549,"0001501 // skeletal system development // inferred from electronic annotation /// 0001503 // ossification // inferred from electronic annotation /// 0001569 // patterning of blood vessels // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001708 // cell fate specification // inferred from electronic annotation /// 0001763 // morphogenesis of a branching structure // inferred from electronic annotation /// 0001944 // vasculature development // inferred from electronic annotation /// 0001947 // heart looping // inferred from sequence or structural similarity /// 0001947 // heart looping // inferred from electronic annotation /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0003382 // epithelial cell morphogenesis // inferred from electronic annotation /// 0003406 // retinal pigment epithelium development // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0007224 // smoothened signaling pathway // inferred from electronic annotation /// 0007267 // cell-cell signaling // non-traceable author statement /// 0007267 // cell-cell signaling // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0009880 // embryonic pattern specification // inferred from electronic annotation /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation /// 0016539 // intein-mediated protein splicing // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030704 // vitelline membrane formation // inferred from electronic annotation /// 0031016 // pancreas development // inferred from electronic annotation /// 0032332 // positive regulation of chondrocyte differentiation // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032967 // positive regulation of collagen biosynthetic process // inferred from electronic annotation /// 0033085 // negative regulation of T cell differentiation in thymus // inferred from sequence or structural similarity /// 0033085 // negative regulation of T cell differentiation in thymus // inferred from electronic annotation /// 0033088 // negative regulation of immature T cell proliferation in thymus // inferred from sequence or structural similarity /// 0033088 // negative regulation of immature T cell proliferation in thymus // inferred from electronic annotation /// 0033089 // positive regulation of T cell differentiation in thymus // inferred from sequence or structural similarity /// 0033089 // positive regulation of T cell differentiation in thymus // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0035988 // chondrocyte proliferation // inferred from electronic annotation /// 0040008 // regulation of growth // inferred from electronic annotation /// 0043010 // camera-type eye development // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045453 // bone resorption // inferred from electronic annotation /// 0045595 // regulation of cell differentiation // inferred from electronic annotation /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045880 // positive regulation of smoothened signaling pathway // inferred from sequence or structural similarity /// 0045880 // positive regulation of smoothened signaling pathway // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046638 // positive regulation of alpha-beta T cell differentiation // inferred from sequence or structural similarity /// 0046638 // positive regulation of alpha-beta T cell differentiation // inferred from electronic annotation /// 0046639 // negative regulation of alpha-beta T cell differentiation // inferred from sequence or structural similarity /// 0046639 // negative regulation of alpha-beta T cell differentiation // inferred from electronic annotation /// 0048074 // negative regulation of eye pigmentation // inferred from electronic annotation /// 0048469 // cell maturation // inferred from electronic annotation /// 0048557 // embryonic digestive tract morphogenesis // inferred from electronic annotation /// 0048596 // embryonic camera-type eye morphogenesis // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation /// 0048745 // smooth muscle tissue development // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0051216 // cartilage development // inferred from electronic annotation /// 0060135 // maternal process involved in female pregnancy // inferred from electronic annotation /// 0060220 // camera-type eye photoreceptor cell fate commitment // inferred from electronic annotation /// 0060323 // head morphogenesis // inferred from electronic annotation /// 0061053 // somite development // inferred from sequence or structural similarity /// 0061053 // somite development // inferred from electronic annotation /// 0072498 // embryonic skeletal joint development // inferred from electronic annotation /// 0090136 // epithelial cell-cell adhesion // inferred from electronic annotation","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0005113 // patched binding // non-traceable author statement /// 0005113 // patched binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0015485 // cholesterol binding // non-traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation","chr2:219919141-219925238 (-) // 98.76 // q35"]
["11746694_a_at",0.099870205,-0.20540619,-0.09986997,0.7912264,0.7588577,-0.104409695,0.441365,0.14713953,-1.4644512,-0.5503601,1.4644512,"down","PAFAH1B1",5048,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000132 // establishment of mitotic spindle orientation // inferred from mutant phenotype /// 0000226 // microtubule cytoskeleton organization // inferred from sequence or structural similarity /// 0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0001675 // acrosome assembly // inferred from sequence or structural similarity /// 0001675 // acrosome assembly // inferred from electronic annotation /// 0001764 // neuron migration // inferred from mutant phenotype /// 0001764 // neuron migration // inferred from sequence or structural similarity /// 0001764 // neuron migration // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007017 // microtubule-based process // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007097 // nuclear migration // inferred from electronic annotation /// 0007268 // synaptic transmission // inferred from sequence or structural similarity /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007405 // neuroblast proliferation // inferred from sequence or structural similarity /// 0007405 // neuroblast proliferation // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007611 // learning or memory // inferred from sequence or structural similarity /// 0007611 // learning or memory // inferred from electronic annotation /// 0008090 // retrograde axon cargo transport // inferred from sequence or structural similarity /// 0008090 // retrograde axon cargo transport // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from mutant phenotype /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0010977 // negative regulation of neuron projection development // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0017145 // stem cell division // inferred from electronic annotation /// 0019226 // transmission of nerve impulse // inferred from sequence or structural similarity /// 0019226 // transmission of nerve impulse // inferred from electronic annotation /// 0021540 // corpus callosum morphogenesis // inferred from mutant phenotype /// 0021766 // hippocampus development // inferred from sequence or structural similarity /// 0021766 // hippocampus development // inferred from electronic annotation /// 0021819 // layer formation in cerebral cortex // inferred from sequence or structural similarity /// 0021819 // layer formation in cerebral cortex // inferred from electronic annotation /// 0021895 // cerebral cortex neuron differentiation // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from mutant phenotype /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from sequence or structural similarity /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031023 // microtubule organizing center organization // inferred from mutant phenotype /// 0032319 // regulation of Rho GTPase activity // inferred from sequence or structural similarity /// 0032319 // regulation of Rho GTPase activity // inferred from electronic annotation /// 0045773 // positive regulation of axon extension // inferred from electronic annotation /// 0045931 // positive regulation of mitotic cell cycle // inferred from electronic annotation /// 0046469 // platelet activating factor metabolic process // inferred from sequence or structural similarity /// 0047496 // vesicle transport along microtubule // inferred from sequence or structural similarity /// 0048854 // brain morphogenesis // inferred from mutant phenotype /// 0050885 // neuromuscular process controlling balance // inferred from mutant phenotype /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation /// 0051081 // nuclear envelope disassembly // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051660 // establishment of centrosome localization // inferred from electronic annotation","0000235 // astral microtubule // inferred from direct assay /// 0000776 // kinetochore // inferred from direct assay /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005626 // insoluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // inferred from sequence or structural similarity /// 0005813 // centrosome // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005871 // kinesin complex // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005875 // microtubule associated complex // inferred from direct assay /// 0005875 // microtubule associated complex // inferred from electronic annotation /// 0005938 // cell cortex // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from sequence or structural similarity /// 0031252 // cell leading edge // inferred from electronic annotation /// 0031512 // motile primary cilium // inferred from sequence or structural similarity /// 0031512 // motile primary cilium // inferred from electronic annotation /// 0031513 // nonmotile primary cilium // inferred from sequence or structural similarity /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0033267 // axon part // inferred from electronic annotation /// 0042598 // vesicular fraction // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from sequence or structural similarity /// 0008017 // microtubule binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from sequence or structural similarity /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0034452 // dynactin binding // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043274 // phospholipase binding // inferred from sequence or structural similarity /// 0045502 // dynein binding // inferred from direct assay /// 0045505 // dynein intermediate chain binding // inferred from electronic annotation /// 0051219 // phosphoprotein binding // inferred from sequence or structural similarity /// 0051219 // phosphoprotein binding // inferred from electronic annotation","chr17:2570339-2586175 (+) // 74.31 // p13.3"]
["11721694_x_at",-0.11485195,-0.12434673,-0.036044598,0.117311954,0.036044598,0.13528538,0.11873623,0.01050946,-1.1391531,-0.18796168,1.1391531,"down","WAS",7454,"0006461 // protein complex assembly // traceable author statement /// 0006461 // protein complex assembly // inferred from electronic annotation /// 0006952 // defense response // traceable author statement /// 0006955 // immune response // inferred from mutant phenotype /// 0007596 // blood coagulation // traceable author statement /// 0008154 // actin polymerization or depolymerization // traceable author statement /// 0008154 // actin polymerization or depolymerization // inferred from electronic annotation /// 0008544 // epidermis development // traceable author statement /// 0016197 // endosomal transport // inferred from electronic annotation /// 0030041 // actin filament polymerization // inferred from electronic annotation /// 0030048 // actin filament-based movement // inferred from electronic annotation /// 0042110 // T cell activation // inferred from electronic annotation /// 0050852 // T cell receptor signaling pathway // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0012506 // vesicle membrane // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement","0003779 // actin binding // inferred from electronic annotation /// 0005083 // small GTPase regulator activity // inferred from electronic annotation /// 0005083 // small GTPase regulator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from electronic annotation","chrX:48534979-48549818 (+) // 90.3 // p11.23"]
["11716750_a_at",-0.07726002,0.0087070465,-0.0087070465,-0.16103458,0.059152603,0.15461731,0.8711362,0.67842716,-1.0304909,-0.04333173,1.0304909,"down","CD99L2",83692,"0007155 // cell adhesion // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","","chrX:149934812-150067289 (-) // 91.72 // q28"]
["11740904_a_at",-0.31022525,0.08148146,-0.2633617,-0.080085754,0.1411972,0.080085754,0.51876456,0.20613001,-1.1575712,-0.21110092,1.1575712,"down","TMEM236",653567,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr10:17794250-17842867 (+) // 64.85 // p12.33 /// chr10:18041217-18089855 (+) // 64.76 // p12.33"]
["11764049_at",-0.06890154,-0.039636612,0.04856348,-0.119784355,0.039636612,0.072357655,0.93116933,0.81353605,-1.0121301,-0.017394805,1.0121301,"down","DPYSL4",10570,"0006208 // pyrimidine base catabolic process // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007411 // axon guidance // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0016787 // hydrolase activity // inferred from electronic annotation /// 0016810 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds // inferred from electronic annotation /// 0016812 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides // inferred from electronic annotation","chr10:134018402-134019261 (-) // 97.06 // q26.3"]
["11721543_a_at",-0.016622543,-0.0053315163,0.0053315163,-0.26649237,0.03746414,0.23955727,0.98431325,0.953924,-1.006293,-0.009050516,1.006293,"down","CSRNP1",64651,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // non-traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0060021 // palate development // inferred from electronic annotation /// 0060325 // face morphogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation","chr3:39183341-39188216 (-) // 90.99 // p22.2"]
["11759153_at",0.2605462,-0.087135315,0.082024574,0.18878603,-0.1251502,-0.082024574,0.8029922,0.55123556,1.0653111,0.09127476,1.0653111,"up","KCNAB3",9196,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // traceable author statement /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005249 // voltage-gated potassium channel activity // inferred from electronic annotation /// 0015459 // potassium channel regulator activity // traceable author statement","chr17:7825176-7832753 (-) // 98.05 // p13.1"]
["11754114_a_at",-0.045806408,-0.016607285,0.054222107,-0.035379887,0.016607285,0.03462839,0.94098663,0.8363337,-1.0055716,-0.008015815,1.0055716,"down","CXCL1",2919,"0006935 // chemotaxis // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0030036 // actin cytoskeleton organization // traceable author statement /// 0035556 // intracellular signal transduction // traceable author statement /// 0043085 // positive regulation of catalytic activity // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005622 // intracellular // traceable author statement","0005102 // receptor binding // traceable author statement /// 0005125 // cytokine activity // inferred from electronic annotation /// 0008009 // chemokine activity // inferred from electronic annotation /// 0008009 // chemokine activity // traceable author statement /// 0008047 // enzyme activator activity // traceable author statement /// 0008083 // growth factor activity // inferred from electronic annotation","chr4:74735126-74736388 (+) // 96.71 // q13.3 /// chr4:74963337-74964895 (-) // 90.52 // q13.3"]
["11716438_at",-0.15866375,-0.38972664,-0.28573227,0.399498,0.15866375,0.17413712,0.09816414,0.0070291846,-1.4360844,-0.5221405,1.4360844,"down","RAD21",5885,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006302 // double-strand break repair // traceable author statement /// 0006310 // DNA recombination // traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007091 // mitotic metaphase/anaphase transition // traceable author statement /// 0007131 // reciprocal meiotic recombination // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0071168 // protein localization to chromatin // inferred from mutant phenotype","0000228 // nuclear chromosome // inferred from electronic annotation /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0008278 // cohesin complex // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr8:117858172-117887109 (-) // 96.69 // q24.11"]
["11733765_at",-0.14582253,-0.00804019,0.008040428,-0.1840787,0.21685123,0.20788527,0.7108983,0.4122969,-1.093404,-0.12882663,1.093404,"down","IFNB1",3456,"0002250 // adaptive immune response // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // non-traceable author statement /// 0006952 // defense response // inferred from electronic annotation /// 0006959 // humoral immune response // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008285 // negative regulation of cell proliferation // non-traceable author statement /// 0009615 // response to virus // non-traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0030101 // natural killer cell activation // non-traceable author statement /// 0032897 // negative regulation of viral transcription // inferred from direct assay /// 0042100 // B cell proliferation // non-traceable author statement /// 0042742 // defense response to bacterium // inferred from electronic annotation /// 0045071 // negative regulation of viral genome replication // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045089 // positive regulation of innate immune response // non-traceable author statement /// 0045343 // regulation of MHC class I biosynthetic process // non-traceable author statement /// 0045581 // negative regulation of T cell differentiation // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0046597 // negative regulation of viral entry into host cell // non-traceable author statement /// 0051607 // defense response to virus // inferred from direct assay /// 0051607 // defense response to virus // inferred from electronic annotation /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement /// 0060338 // regulation of type I interferon-mediated signaling pathway // traceable author statement /// 0071360 // cellular response to exogenous dsRNA // inferred from mutant phenotype /// 2000552 // negative regulation of T-helper 2 cell cytokine production // inferred from direct assay","0005576 // extracellular region // inferred by curator /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0003714 // transcription corepressor activity // inferred from direct assay /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005126 // cytokine receptor binding // inferred from electronic annotation /// 0005132 // interferon-alpha/beta receptor binding // non-traceable author statement","chr9:21077103-21077962 (-) // 89.89 // p21.3"]
["11734865_a_at",0.07410717,-0.012349129,0.008205414,0.1700077,-0.008205414,-0.037345886,0.92872405,0.8076881,-1.0126702,-0.018164344,1.0126702,"down","PSMC3IP",29893,"0006310 // DNA recombination // inferred from electronic annotation /// 0007126 // meiosis // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0030331 // estrogen receptor binding // inferred from electronic annotation /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from mutant phenotype /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from electronic annotation /// 0035259 // glucocorticoid receptor binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046966 // thyroid hormone receptor binding // inferred from electronic annotation /// 0050681 // androgen receptor binding // inferred from electronic annotation /// 0050692 // DBD domain binding // inferred from electronic annotation","chr17:40724316-40729756 (-) // 96.59 // q21.2"]
["11754900_a_at",-0.008110046,0.0055942535,-0.0055942535,-0.05685711,0.183846,0.169456,0.5832267,0.26329383,-1.072902,-0.10151826,1.072902,"down","SAMD14",201191,"","","","chr17:48190032-48192388 (-) // 83.16 // q21.33"]
["11751304_a_at",-0.07480574,0.031133175,-0.0018062592,0.05365324,0.0018062592,-0.046945095,0.87918437,0.6950709,-1.0125532,-0.01799773,1.0125532,"down","ITGAL",3683,"0002291 // T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell // inferred from mutant phenotype /// 0006928 // cellular component movement // traceable author statement /// 0006954 // inflammatory response // non-traceable author statement /// 0007155 // cell adhesion // non-traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007157 // heterophilic cell-cell adhesion // inferred from mutant phenotype /// 0007159 // leukocyte cell-cell adhesion // inferred from mutant phenotype /// 0007159 // leukocyte cell-cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0022407 // regulation of cell-cell adhesion // inferred from electronic annotation /// 0022409 // positive regulation of cell-cell adhesion // inferred from electronic annotation /// 0042102 // positive regulation of T cell proliferation // inferred from electronic annotation /// 0050776 // regulation of immune response // traceable author statement /// 0050798 // activated T cell proliferation // inferred from electronic annotation /// 0050850 // positive regulation of calcium-mediated signaling // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement","0001772 // immunological synapse // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0008305 // integrin complex // non-traceable author statement /// 0008305 // integrin complex // inferred from electronic annotation /// 0008305 // integrin complex // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0050839 // cell adhesion molecule binding // inferred from physical interaction","chr16:30484071-30533100 (+) // 92.66 // p11.2"]
["11716195_a_at",0.12008953,0.027647972,-0.039535522,0.23093128,-0.027647972,-0.05329323,0.96362126,0.8978582,-1.0097018,-0.013929347,1.0097018,"down","ID1",3397,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001525 // angiogenesis // traceable author statement /// 0001886 // endothelial cell morphogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0010621 // negative regulation of transcription by transcription factor localization // traceable author statement /// 0030509 // BMP signaling pathway // inferred from electronic annotation /// 0031648 // protein destabilization // inferred from electronic annotation /// 0032963 // collagen metabolic process // inferred from electronic annotation /// 0043392 // negative regulation of DNA binding // inferred from electronic annotation /// 0043408 // regulation of MAPK cascade // inferred from electronic annotation /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0043534 // blood vessel endothelial cell migration // traceable author statement /// 0045668 // negative regulation of osteoblast differentiation // inferred from electronic annotation /// 0045765 // regulation of angiogenesis // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0046677 // response to antibiotic // inferred from electronic annotation /// 0048514 // blood vessel morphogenesis // traceable author statement /// 0060425 // lung morphogenesis // inferred from electronic annotation /// 0060426 // lung vasculature development // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred by curator /// 0005737 // cytoplasm // inferred from electronic annotation","0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr20:30193090-30194318 (+) // 91.69 // q11.21"]
["11750049_x_at",-0.11559057,-0.033195972,0.25640774,-0.23126698,0.033195972,0.14940166,0.9094823,0.76019424,1.0367707,0.052096855,1.0367707,"up","LILRB5",10990,"0006952 // defense response // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement","chr19:54758782-54761148 (-) // 99.78 // q13.42"]
["11743445_a_at",0.57130957,-0.09483099,-0.012005329,0.35822868,-0.049496174,0.012005329,0.94811106,0.85450816,1.0337676,0.047911864,1.0337676,"up","SUPT6H",6830,"0006139 // nucleobase-containing compound metabolic process // inferred from electronic annotation /// 0006338 // chromatin remodeling // non-traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0032784 // regulation of transcription elongation, DNA-dependent // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation","chr17:26989215-27029249 (+) // 97.82 // q11.2"]
["11758690_s_at",-0.20195961,-0.09323692,0.099823475,-0.031606674,0.25685024,0.031606674,0.6119343,0.29195583,-1.1101396,-0.15074112,1.1101396,"down","CRIPAK",285464,"0006469 // negative regulation of protein kinase activity // inferred from direct assay /// 0033147 // negative regulation of intracellular estrogen receptor signaling pathway // inferred from direct assay /// 0043627 // response to estrogen stimulus // inferred from direct assay /// 0051493 // regulation of cytoskeleton organization // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr4:1389555-1389777 (+) // 100.0 // p16.3"]
["11748276_a_at",0.20153141,0.006801605,-0.006801605,-0.0839262,-0.008316517,0.19284916,0.9124631,0.76796037,1.0235926,0.03364161,1.0235926,"up","CANT1",124583,"0007165 // signal transduction // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from mutant phenotype /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0016462 // pyrophosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017110 // nucleoside-diphosphatase activity // inferred from electronic annotation /// 0045134 // uridine-diphosphatase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:76989568-77005875 (-) // 90.57 // q25.3"]
["11757200_x_at",0.049398422,-0.13168907,-0.01267004,0.004691124,0.22727537,-0.004691124,0.62899727,0.3104556,-1.077294,-0.10741201,1.077294,"down","LOC285696",285696,"","","","chr5:17130625-17217531 (-) // 57.9 // p15.1"]
["11726485_at",0.02630043,0.026222706,0.23166656,-0.10710955,-0.026222706,-0.028065681,0.3871096,0.11330764,1.1084388,0.14852919,1.1084388,"up","CPED1",79974,"","0005783 // endoplasmic reticulum // inferred from direct assay","","chr7:120628730-120937575 (+) // 95.28 // q31.31"]
["11740288_a_at",0.012994766,0.04119754,-0.012994766,-0.11823964,-0.07558322,0.19344139,0.962755,0.89523107,1.0096531,0.01385968,1.0096531,"up","CHRNA1",1134,"0003009 // skeletal muscle contraction // inferred from mutant phenotype /// 0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007274 // neuromuscular synaptic transmission // inferred from mutant phenotype /// 0007528 // neuromuscular junction development // inferred from mutant phenotype /// 0019228 // regulation of action potential in neuron // inferred from mutant phenotype /// 0042391 // regulation of membrane potential // inferred from mutant phenotype /// 0046716 // muscle cell homeostasis // inferred from mutant phenotype /// 0048630 // skeletal muscle tissue growth // inferred from mutant phenotype /// 0050881 // musculoskeletal movement // inferred from mutant phenotype /// 0050905 // neuromuscular process // inferred from mutant phenotype /// 0070050 // neuron homeostasis // inferred from mutant phenotype","0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005892 // acetylcholine-gated channel complex // inferred from sequence or structural similarity /// 0005892 // acetylcholine-gated channel complex // inferred from electronic annotation /// 0005892 // acetylcholine-gated channel complex // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031594 // neuromuscular junction // inferred from direct assay /// 0031594 // neuromuscular junction // inferred from sequence or structural similarity /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // non-traceable author statement /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004889 // acetylcholine-activated cation-selective channel activity // inferred from mutant phenotype /// 0004889 // acetylcholine-activated cation-selective channel activity // inferred from sequence or structural similarity /// 0004889 // acetylcholine-activated cation-selective channel activity // inferred from electronic annotation /// 0004889 // acetylcholine-activated cation-selective channel activity // traceable author statement /// 0005216 // ion channel activity // traceable author statement /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0015464 // acetylcholine receptor activity // inferred from sequence or structural similarity /// 0015464 // acetylcholine receptor activity // inferred from electronic annotation /// 0015464 // acetylcholine receptor activity // traceable author statement /// 0042166 // acetylcholine binding // inferred from sequence or structural similarity /// 0042166 // acetylcholine binding // inferred from electronic annotation","chr2:175612326-175629200 (-) // 95.18 // q31.1"]
["11732930_a_at",-0.09294748,0.043997765,-0.043997765,-0.15819502,0.07472658,0.27702332,0.7776244,0.50933003,-1.0684363,-0.09550085,1.0684363,"down","SLC6A18",348932,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0006865 // amino acid transport // traceable author statement /// 0006865 // amino acid transport // inferred from electronic annotation /// 0006970 // response to osmotic stress // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005328 // neurotransmitter:sodium symporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation","chr5:1225469-1246304 (+) // 96.54 // p15.33"]
["11761374_x_at",0.29665184,-0.048335075,-0.0109529495,0.0109529495,0.018235207,-0.07897997,0.7366408,0.4471939,1.0685974,0.09571846,1.0685974,"up","AGPAT4",56895,"0008152 // metabolic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // non-traceable author statement /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0016024 // CDP-diacylglycerol biosynthetic process // inferred from electronic annotation /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003841 // 1-acylglycerol-3-phosphate O-acyltransferase activity // non-traceable author statement /// 0003841 // 1-acylglycerol-3-phosphate O-acyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation","chr6:161567554-161695056 (-) // 99.56 // q26"]
["11735940_s_at",0.031456947,-0.14494419,0.031456947,-0.031457186,0.17791581,-0.17808485,0.962677,0.8944253,-1.0117139,-0.016801318,1.0117139,"down","DEFB103A /// DEFB103B","414325 /// 55894","0006952 // defense response // inferred from electronic annotation /// 0006965 // positive regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria // traceable author statement /// 0042742 // defense response to bacterium // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005796 // Golgi lumen // traceable author statement","","chr8:7738725-7740178 (+) // 97.51 // p23.1 /// chr8:7286417-7287870 (-) // 97.51 // p23.1"]
["11763775_s_at",0.021458626,0.19230533,0.12886596,-0.36971378,-0.09819436,-0.021458626,0.3174774,0.07648509,1.2119517,0.27733225,1.2119517,"up","LOC100130927",100130927,"","","","chr6:3150252-3152439 (+) // 97.58 // p25.2"]
["11746791_s_at",0.5030937,-0.09884262,-0.026094437,0.6984825,0.026094437,-0.027346611,0.90118027,0.74156034,-1.0765071,-0.10635782,1.0765071,"down","BECN1",8678,"0000045 // autophagic vacuole assembly // inferred from electronic annotation /// 0000910 // cytokinesis // inferred from mutant phenotype /// 0006914 // autophagy // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0006968 // cellular defense response // traceable author statement /// 0007040 // lysosome organization // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009615 // response to virus // inferred from electronic annotation /// 0016239 // positive regulation of macroautophagy // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation /// 0050435 // beta-amyloid metabolic process // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051707 // response to other organism // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr17:40962325-40976305 (-) // 99.81 // q21.31"]
["11759943_at",-0.079220295,-0.029512405,-0.07825613,0.049438953,0.24989843,0.029512882,0.31640008,0.07603838,-1.1265774,-0.1719464,1.1265774,"down","FAM13A",10144,"0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005096 // GTPase activator activity // inferred from electronic annotation","chr4:89910628-89978496 (-) // 92.75 // q22.1"]
["11746425_x_at",0.16451359,-0.050532818,-0.06310272,-0.028686523,0.028686523,0.0659256,0.9836299,0.9523159,-1.0034828,-0.0050159153,1.0034828,"down","ZSCAN2",54993,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:85144239-85166948 (+) // 98.24 // q25.2"]
["11716822_a_at",0.064715385,0.0112018585,-0.0112018585,0.057481766,-0.08036804,-0.23347282,0.6057503,0.28601182,1.0770049,0.107024826,1.0770049,"up","BDH2 /// SLC9B2","133308 /// 56898","0006635 // fatty acid beta-oxidation // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009239 // enterobactin biosynthetic process // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0019290 // siderophore biosynthetic process // inferred from sequence or structural similarity /// 0019290 // siderophore biosynthetic process // inferred from electronic annotation /// 0042168 // heme metabolic process // inferred from sequence or structural similarity /// 0055072 // iron ion homeostasis // inferred from sequence or structural similarity /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003858 // 3-hydroxybutyrate dehydrogenase activity // inferred from direct assay /// 0003858 // 3-hydroxybutyrate dehydrogenase activity // inferred from electronic annotation /// 0008667 // 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase activity // inferred from electronic annotation /// 0015297 // antiporter activity // inferred from electronic annotation /// 0015299 // solute:hydrogen antiporter activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016628 // oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor // inferred from sequence or structural similarity /// 0016628 // oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0051287 // NAD binding // inferred from direct assay","chr4:103998764-104021064 (-) // 75.83 // q24"]
["11757216_x_at",0.41534233,-0.017745256,0.017745018,0.3040123,-0.12976694,-0.11349654,0.82116437,0.58369815,1.0853782,0.1181978,1.0853782,"up","LOC100268168",100268168,"","","","chr5:172381784-172386371 (-) // 65.87 // q35.1"]
["11746931_a_at",-0.0040512085,-0.0046339035,0.0040512085,-0.23988008,0.13234091,0.078234196,0.981657,0.9469514,1.0057166,0.008223772,1.0057166,"up","INHBA",3624,"0000082 // G1/S transition of mitotic cell cycle // inferred from direct assay /// 0001541 // ovarian follicle development // inferred from genetic interaction /// 0001541 // ovarian follicle development // non-traceable author statement /// 0001707 // mesoderm formation // inferred from electronic annotation /// 0001942 // hair follicle development // inferred from genetic interaction /// 0002244 // hemopoietic progenitor cell differentiation // inferred from direct assay /// 0002244 // hemopoietic progenitor cell differentiation // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006917 // induction of apoptosis // inferred from sequence or structural similarity /// 0006952 // defense response // traceable author statement /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007050 // cell cycle arrest // inferred from sequence or structural similarity /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007399 // nervous system development // non-traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008584 // male gonad development // inferred from genetic interaction /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0030154 // cell differentiation // traceable author statement /// 0030218 // erythrocyte differentiation // non-traceable author statement /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0032925 // regulation of activin receptor signaling pathway // inferred from direct assay /// 0040007 // growth // inferred from electronic annotation /// 0042326 // negative regulation of phosphorylation // traceable author statement /// 0042476 // odontogenesis // inferred from genetic interaction /// 0042541 // hemoglobin biosynthetic process // inferred from direct assay /// 0042541 // hemoglobin biosynthetic process // inferred from sequence or structural similarity /// 0042701 // progesterone secretion // inferred from genetic interaction /// 0045077 // negative regulation of interferon-gamma biosynthetic process // traceable author statement /// 0045578 // negative regulation of B cell differentiation // traceable author statement /// 0045648 // positive regulation of erythrocyte differentiation // inferred from direct assay /// 0045650 // negative regulation of macrophage differentiation // traceable author statement /// 0045786 // negative regulation of cell cycle // inferred from direct assay /// 0045786 // negative regulation of cell cycle // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046880 // regulation of follicle-stimulating hormone secretion // inferred from genetic interaction /// 0046881 // positive regulation of follicle-stimulating hormone secretion // traceable author statement /// 0046882 // negative regulation of follicle-stimulating hormone secretion // non-traceable author statement /// 0048333 // mesodermal cell differentiation // inferred from electronic annotation /// 0051799 // negative regulation of hair follicle development // inferred from direct assay /// 0060021 // palate development // inferred from genetic interaction /// 0060279 // positive regulation of ovulation // inferred from sequence or structural similarity /// 0060279 // positive regulation of ovulation // inferred from electronic annotation /// 0061029 // eyelid development in camera-type eye // inferred from sequence or structural similarity /// 0061029 // eyelid development in camera-type eye // inferred from electronic annotation /// 0071372 // cellular response to follicle-stimulating hormone stimulus // inferred from electronic annotation /// 0071397 // cellular response to cholesterol // inferred from electronic annotation","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005576 // extracellular region // inferred from sequence or structural similarity /// 0043509 // activin A complex // inferred from direct assay /// 0043512 // inhibin A complex // inferred from direct assay /// 0043512 // inhibin A complex // inferred from electronic annotation","0005102 // receptor binding // inferred from electronic annotation /// 0005125 // cytokine activity // inferred from direct assay /// 0005125 // cytokine activity // inferred from sequence or structural similarity /// 0005179 // hormone activity // traceable author statement /// 0005179 // hormone activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // traceable author statement /// 0008083 // growth factor activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from sequence or structural similarity /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0070699 // type II activin receptor binding // inferred from physical interaction","chr7:41729131-41740373 (-) // 85.27 // p14.1"]
["11751984_x_at",-0.15415287,-0.08650112,-0.041537285,0.08190107,0.041536808,0.1351533,0.1325062,0.013246597,-1.1330887,-0.1802608,1.1330887,"down","DSTYK",25778,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004712 // protein serine/threonine/tyrosine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr1:205114676-205180727 (-) // 85.37 // q32.1"]
["11744566_a_at",0.04421997,-0.10044098,-0.1355896,0.071043015,0.044569016,-0.04421997,0.5685369,0.24923772,-1.0626999,-0.08773427,1.0626999,"down","DDX49",54555,"","","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr19:19030522-19039435 (+) // 94.25 // p13.11"]
["11733738_a_at",0.07503891,-0.31361008,-0.07503891,0.14045668,-0.092639446,0.17304039,0.5943679,0.27423227,-1.1314367,-0.17815588,1.1314367,"down","KRIT1",889,"0001525 // angiogenesis // inferred from electronic annotation /// 0001937 // negative regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0010596 // negative regulation of endothelial cell migration // inferred from mutant phenotype /// 0016525 // negative regulation of angiogenesis // inferred from mutant phenotype /// 0016525 // negative regulation of angiogenesis // inferred from electronic annotation /// 0032092 // positive regulation of protein binding // inferred from electronic annotation /// 0045454 // cell redox homeostasis // inferred from mutant phenotype /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 2000114 // regulation of establishment of cell polarity // inferred from mutant phenotype /// 2000114 // regulation of establishment of cell polarity // inferred from electronic annotation /// 2000352 // negative regulation of endothelial cell apoptotic process // inferred from mutant phenotype","0005856 // cytoskeleton // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0005083 // small GTPase regulator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr7:91828282-91875237 (-) // 83.25 // q21.2"]
["11737102_at",0.10013366,0.10741496,0.03254962,-0.09311628,-0.03254962,-0.1485939,0.13644336,0.014037962,1.1261919,0.17145261,1.1261919,"up","RFX6",222546,"0003309 // type B pancreatic cell differentiation // inferred from sequence or structural similarity /// 0003309 // type B pancreatic cell differentiation // inferred from electronic annotation /// 0003310 // pancreatic A cell differentiation // inferred from sequence or structural similarity /// 0003310 // pancreatic A cell differentiation // inferred from electronic annotation /// 0003311 // pancreatic D cell differentiation // inferred from sequence or structural similarity /// 0003311 // pancreatic D cell differentiation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031018 // endocrine pancreas development // inferred from mutant phenotype /// 0042593 // glucose homeostasis // inferred from mutant phenotype /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0050796 // regulation of insulin secretion // inferred from mutant phenotype /// 0050796 // regulation of insulin secretion // inferred from electronic annotation /// 0090104 // pancreatic E cell differentiation // inferred from sequence or structural similarity /// 0090104 // pancreatic E cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay","chr6:117198374-117253306 (+) // 98.39 // q22.1"]
["11732127_a_at",-0.15345573,-0.0035076141,0.0035066605,0.13282394,0.08840561,-0.019524574,0.45602724,0.15813006,-1.0855207,-0.1183873,1.0855207,"down","CCT4",10575,"0006457 // protein folding // traceable author statement /// 0006457 // protein folding // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044267 // cellular protein metabolic process // inferred from electronic annotation /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005832 // chaperonin-containing T-complex // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // traceable author statement","chr2:62095223-62116028 (-) // 98.32 // p15"]
["11747565_a_at",0.056456566,-0.05138302,-0.16599655,0.15392494,-0.23437786,0.05138302,0.9081882,0.7572004,-1.0309334,-0.043951105,1.0309334,"down","PPP2R4",5524,"0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006457 // protein folding // inferred from electronic annotation /// 0032515 // negative regulation of phosphoprotein phosphatase activity // inferred from direct assay /// 0032516 // positive regulation of phosphoprotein phosphatase activity // inferred from direct assay /// 0035307 // positive regulation of protein dephosphorylation // inferred from direct assay /// 0035308 // negative regulation of protein dephosphorylation // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043666 // regulation of phosphoprotein phosphatase activity // inferred from direct assay","0000159 // protein phosphatase type 2A complex // traceable author statement /// 0005625 // soluble fraction // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0034704 // calcium channel complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0008160 // protein tyrosine phosphatase activator activity // inferred from direct assay /// 0008160 // protein tyrosine phosphatase activator activity // traceable author statement /// 0008601 // protein phosphatase type 2A regulator activity // inferred from direct assay /// 0008601 // protein phosphatase type 2A regulator activity // traceable author statement /// 0016853 // isomerase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0019211 // phosphatase activator activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // traceable author statement /// 0051721 // protein phosphatase 2A binding // inferred from direct assay","chr9:131873596-131909864 (+) // 99.92 // q34.11"]
["11751365_x_at",0.06588936,-0.07800913,0.059401512,-0.004937649,-0.031191349,0.0049381256,0.83835864,0.61577755,1.0182964,0.026157498,1.0182964,"up","SLC47A1",55244,"0006810 // transport // inferred from electronic annotation /// 0006855 // drug transmembrane transport // inferred from electronic annotation /// 0015695 // organic cation transport // inferred from electronic annotation /// 0015893 // drug transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005451 // monovalent cation:hydrogen antiporter activity // inferred from electronic annotation /// 0015238 // drug transmembrane transporter activity // inferred from electronic annotation /// 0015297 // antiporter activity // inferred from electronic annotation","chr17:19458885-19481250 (+) // 99.78 // p11.2"]
["11742243_a_at",0.24692965,0.032711506,0.026331425,-0.026331425,-0.061234474,-0.029745102,0.40980595,0.12670647,1.1027414,0.14109446,1.1027414,"up","ATF3",467,"0006094 // gluconeogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr1:212781993-212794117 (+) // 100.0 // q32.3"]
["11722932_at",-0.16596508,0.0289855,-0.059351444,0.57194376,-0.028985023,0.34597635,0.39998463,0.120833494,-1.2849884,-0.36175534,1.2849884,"down","CHML",1122,"0006886 // intracellular protein transport // inferred from electronic annotation /// 0007601 // visual perception // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005968 // Rab-protein geranylgeranyltransferase complex // inferred from electronic annotation","0004663 // Rab geranylgeranyltransferase activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // inferred from electronic annotation","chr1:241792165-241799496 (-) // 89.4 // q43"]
["11718461_at",0.118047714,0.028102875,-0.13395786,0.14504242,-0.028102398,-0.05131054,0.95059097,0.8622579,-1.012423,-0.017812243,1.012423,"down","SLC39A11",201266,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006829 // zinc ion transport // inferred from electronic annotation /// 0030001 // metal ion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0046873 // metal ion transmembrane transporter activity // inferred from electronic annotation","chr17:70642087-71088853 (-) // 96.13 // q24.3"]
["11759436_at",-0.1412673,0.08450794,-0.077803135,0.03839326,0.0026319027,-0.002632141,0.73662466,0.44706067,-1.0407704,-0.05765185,1.0407704,"down","BCL2L10",10017,"0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from direct assay /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // traceable author statement /// 0007283 // spermatogenesis // traceable author statement /// 0007292 // female gamete generation // traceable author statement /// 0042981 // regulation of apoptotic process // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr15:52401459-52404972 (-) // 97.41 // q21.2"]
["11764100_at",-0.07765007,-0.030736446,0.19260454,0.008378029,-0.008378029,0.18597364,0.9097404,0.76068324,-1.023789,-0.033918478,1.023789,"down","","","","","","chr18:72879712-72880241 (+) // 99.25 // q22.3"]
["11751378_a_at",0.034926414,-0.06533337,-0.10613918,0.017497063,0.012815475,-0.012815475,0.6179255,0.29797283,-1.0362325,-0.051347695,1.0362325,"down","TMEM161B",153396,"0015074 // DNA integration // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation","chr5:87491644-87516448 (-) // 99.93 // q14.3"]
["11738895_at",-0.030246973,0.034951687,0.17638922,-0.21371412,-0.04483199,0.030246973,0.53851885,0.22207974,1.099208,0.1364644,1.099208,"up","CAPN10",11132,"0006508 // proteolysis // inferred from mutant phenotype /// 0006508 // proteolysis // inferred from electronic annotation /// 0031532 // actin cytoskeleton reorganization // inferred from sequence or structural similarity /// 0031532 // actin cytoskeleton reorganization // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from mutant phenotype /// 0032388 // positive regulation of intracellular transport // inferred from sequence or structural similarity /// 0032388 // positive regulation of intracellular transport // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from mutant phenotype /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0046326 // positive regulation of glucose import // inferred from mutant phenotype /// 0046326 // positive regulation of glucose import // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005623 // cell // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from sequence or structural similarity","0000149 // SNARE binding // inferred from sequence or structural similarity /// 0004198 // calcium-dependent cysteine-type endopeptidase activity // inferred from mutant phenotype /// 0004198 // calcium-dependent cysteine-type endopeptidase activity // inferred from electronic annotation /// 0008092 // cytoskeletal protein binding // inferred from sequence or structural similarity /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr2:241526151-241557122 (+) // 32.06 // q37.3"]
["11742495_x_at",-0.04553318,0.07779956,0.04553342,0.06104374,-0.18042064,-0.072609425,0.6363403,0.31852874,1.0643176,0.0899287,1.0643176,"up","SFTPA1 /// SFTPA2","653509 /// 729238","0006869 // lipid transport // traceable author statement /// 0007585 // respiratory gaseous exchange // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0005319 // lipid transporter activity // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr10:81370715-81375202 (+) // 77.73 // q22.3"]
["11744252_at",0.08636618,0.11775303,0.13560343,-0.08636618,-0.25411797,-0.15924454,0.08565594,0.005243923,1.214041,0.27981713,1.214041,"up","RFX3",5991,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031018 // endocrine pancreas development // inferred from sequence or structural similarity /// 0031018 // endocrine pancreas development // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from sequence or structural similarity /// 0042384 // cilium assembly // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048469 // cell maturation // inferred from sequence or structural similarity /// 0048469 // cell maturation // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // inferred from sequence or structural similarity /// 0050796 // regulation of insulin secretion // inferred from electronic annotation /// 0060285 // ciliary cell motility // inferred from sequence or structural similarity /// 0060285 // ciliary cell motility // inferred from electronic annotation /// 0060287 // epithelial cilium movement involved in determination of left/right asymmetry // inferred from sequence or structural similarity /// 0060287 // epithelial cilium movement involved in determination of left/right asymmetry // inferred from electronic annotation /// 0072560 // type B pancreatic cell maturation // inferred from electronic annotation /// 2000078 // positive regulation of type B pancreatic cell development // inferred from sequence or structural similarity /// 2000078 // positive regulation of type B pancreatic cell development // inferred from electronic annotation","0000790 // nuclear chromatin // inferred from direct assay /// 0000790 // nuclear chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005667 // transcription factor complex // inferred by curator","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation","chr9:3223736-3525983 (-) // 95.14 // p24.2"]
["11741891_at",-0.07262802,-0.027254105,0.09690809,-0.11649799,0.04965973,0.027254581,0.95578504,0.87474793,1.0084945,0.012203211,1.0084945,"up","EVX2",344191,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0035108 // limb morphogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr2:176944834-176948690 (-) // 82.44 // q31.1"]
["11762844_x_at",-0.11219072,-0.025484085,0.025484085,-0.19201803,0.13441133,0.22143412,0.78684205,0.5244976,-1.0658512,-0.09200606,1.0658512,"down","ITFG2",55846,"","","","chr12:2914296-2929390 (+) // 65.89 // p13.33"]
["11719969_a_at",0.21037292,0.111878395,0.016104698,-0.09091663,-0.016104698,-0.16484547,0.24320075,0.04502131,1.1514148,0.2034076,1.1514148,"up","NVL",4931,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016235 // aggresome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // traceable author statement /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr1:224415046-224518089 (-) // 97.84 // q42.11"]
["11759599_at",-0.3494811,-0.29730988,-0.44819975,0.32130003,0.33214474,0.2973094,0.01896025,0.000114727496,-1.6042677,-0.6819149,1.6042677,"down","PNISR",25957,"","0005634 // nucleus // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","","chr6:99856014-99873184 (-) // 89.06 // q16.2"]
["11735502_a_at",0.061518192,-0.0039024353,0.0039019585,-0.18948269,-0.031552315,0.04517317,0.6504754,0.3340279,1.0563782,0.07912649,1.0563782,"up","TAPBP",6892,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006461 // protein complex assembly // traceable author statement /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // non-traceable author statement /// 0006955 // immune response // traceable author statement /// 0019885 // antigen processing and presentation of endogenous peptide antigen via MHC class I // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0050823 // peptide antigen stabilization // inferred from sequence or structural similarity","0000139 // Golgi membrane // inferred from direct assay /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0042824 // MHC class I peptide loading complex // non-traceable author statement /// 0042825 // TAP complex // inferred from direct assay /// 0071556 // integral to lumenal side of endoplasmic reticulum membrane // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0015433 // peptide antigen-transporting ATPase activity // traceable author statement /// 0042288 // MHC class I protein binding // traceable author statement /// 0042605 // peptide antigen binding // traceable author statement /// 0046978 // TAP1 binding // inferred from physical interaction /// 0046978 // TAP1 binding // traceable author statement /// 0046979 // TAP2 binding // inferred from physical interaction /// 0046979 // TAP2 binding // traceable author statement /// 0051082 // unfolded protein binding // traceable author statement","chr6:33271417-33281989 (-) // 90.61 // p21.32"]
["11754369_x_at",0.097893715,0.053256035,-0.04603243,0.017459393,-0.017458916,-0.053922653,0.6420908,0.32479563,1.0374295,0.05301323,1.0374295,"up","UPRT",139596,"","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","","chrX:74493924-74524435 (+) // 98.5 // q13.3"]
["11731479_s_at",-0.16611671,-0.04528904,0.010998726,0.28650188,0.2366333,-0.010998726,0.34171793,0.088120155,-1.1789597,-0.23751444,1.1789597,"down","TXNDC9",10190,"0045454 // cell redox homeostasis // inferred from electronic annotation","","0005515 // protein binding // inferred from physical interaction","chr2:99935066-99957155 (-) // 78.26 // q11.2"]
["11747171_a_at",-0.0967536,0.21443129,0.015814304,-0.120891094,-0.015814304,0.13537836,0.89178514,0.72157925,1.03164,0.04493969,1.03164,"up","MIR4800 /// MXD4","100616358 /// 10608","0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // traceable author statement","chr4:2251190-2263823 (-) // 80.89 // p16.3"]
["11744678_a_at",0.0049204826,-0.0049204826,0.033729076,-0.09978199,-0.068154335,0.00818634,0.41729498,0.13138519,1.0457174,0.06449296,1.0457174,"up","C16orf62",57020,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr16:19590045-19712446 (+) // 96.68 // p12.3"]
["11748904_x_at",0.12023401,0.10535097,-0.006009102,-0.24777889,-0.043568134,0.006008625,0.4086474,0.12606476,1.1237372,0.1683047,1.1237372,"up","DBF4B",80174,"0007049 // cell cycle // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:42786218-42808790 (+) // 75.84 // q21.31"]
["11748986_a_at",0.14827967,0.060128212,-0.01974392,-0.21135664,-0.08168173,0.019744396,0.42400315,0.13583209,1.1126393,0.15398598,1.1126393,"up","SMAD7",4092,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0010719 // negative regulation of epithelial to mesenchymal transition // inferred by curator /// 0010719 // negative regulation of epithelial to mesenchymal transition // traceable author statement /// 0010801 // negative regulation of peptidyl-threonine phosphorylation // inferred from direct assay /// 0010944 // negative regulation of transcription by competitive promoter binding // inferred from direct assay /// 0017015 // regulation of transforming growth factor beta receptor signaling pathway // inferred by curator /// 0017015 // regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0022409 // positive regulation of cell-cell adhesion // inferred from direct assay /// 0030336 // negative regulation of cell migration // traceable author statement /// 0030509 // BMP signaling pathway // traceable author statement /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0030514 // negative regulation of BMP signaling pathway // inferred from direct assay /// 0030514 // negative regulation of BMP signaling pathway // inferred from electronic annotation /// 0031397 // negative regulation of protein ubiquitination // inferred from direct assay /// 0031398 // positive regulation of protein ubiquitination // inferred from direct assay /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0032925 // regulation of activin receptor signaling pathway // inferred from direct assay /// 0033137 // negative regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0034333 // adherens junction assembly // inferred from mutant phenotype /// 0034616 // response to laminar fluid shear stress // inferred from expression pattern /// 0034629 // cellular protein complex localization // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0045768 // positive regulation of anti-apoptosis // traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0048844 // artery morphogenesis // inferred from sequence or structural similarity /// 0048844 // artery morphogenesis // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from direct assay /// 0051444 // negative regulation of ubiquitin-protein ligase activity // inferred from direct assay /// 0055010 // ventricular cardiac muscle tissue morphogenesis // inferred from sequence or structural similarity /// 0055010 // ventricular cardiac muscle tissue morphogenesis // inferred from electronic annotation /// 0055117 // regulation of cardiac muscle contraction // inferred from sequence or structural similarity /// 0055117 // regulation of cardiac muscle contraction // inferred from electronic annotation /// 0060373 // regulation of ventricular cardiomyocyte membrane depolarization // inferred by curator /// 0060389 // pathway-restricted SMAD protein phosphorylation // inferred from sequence or structural similarity /// 0060389 // pathway-restricted SMAD protein phosphorylation // inferred from electronic annotation /// 0060394 // negative regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0060394 // negative regulation of pathway-restricted SMAD protein phosphorylation // traceable author statement /// 0060412 // ventricular septum morphogenesis // inferred from sequence or structural similarity /// 0060412 // ventricular septum morphogenesis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005913 // cell-cell adherens junction // inferred from direct assay /// 0016342 // catenin complex // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation","0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from electronic annotation /// 0008013 // beta-catenin binding // inferred from physical interaction /// 0030617 // transforming growth factor beta receptor, inhibitory cytoplasmic mediator activity // inferred from direct assay /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0034713 // type I transforming growth factor beta receptor binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0048185 // activin binding // inferred from physical interaction /// 0070411 // I-SMAD binding // inferred from physical interaction","chr18:46447362-46475703 (-) // 95.1 // q21.1"]
["11752311_x_at",0.0002913475,-0.0002913475,-0.2845211,-0.18504477,0.0002913475,0.021474361,0.9020908,0.7436651,-1.0284089,-0.04041398,1.0284089,"down","CEP68",23177,"0051297 // centrosome organization // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","","chr2:65283549-65309811 (+) // 99.83 // p14"]
["11716858_a_at",0.0039787292,-0.02551651,-0.0030555725,0.13703728,0.0030555725,-0.070780754,0.8503673,0.6374056,-1.0219339,-0.0313019,1.0219339,"down","MRPL51",51258,"0006412 // translation // inferred from sequence or structural similarity /// 0006412 // translation // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005761 // mitochondrial ribosome // inferred from direct assay /// 0005761 // mitochondrial ribosome // inferred from electronic annotation /// 0005762 // mitochondrial large ribosomal subunit // inferred from sequence or structural similarity /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from sequence or structural similarity /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr12:6600653-6602764 (-) // 86.06 // p13.31"]
["11730390_at",-0.30155563,-0.046307087,0.15751886,-0.06098509,0.16081333,0.04630661,0.76397026,0.4891867,-1.080845,-0.11215964,1.080845,"down","SEMA3A",10371,"0002027 // regulation of heart rate // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0007413 // axonal fasciculation // inferred from electronic annotation /// 0010633 // negative regulation of epithelial cell migration // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030517 // negative regulation of axon extension // inferred from electronic annotation /// 0048485 // sympathetic nervous system development // traceable author statement /// 0048841 // regulation of axon extension involved in axon guidance // inferred from direct assay /// 0048841 // regulation of axon extension involved in axon guidance // inferred from electronic annotation /// 0048843 // negative regulation of axon extension involved in axon guidance // inferred from electronic annotation /// 0048880 // sensory system development // traceable author statement /// 0050919 // negative chemotaxis // traceable author statement /// 0050919 // negative chemotaxis // inferred from electronic annotation /// 0060666 // dichotomous subdivision of terminal units involved in salivary gland branching // inferred from electronic annotation /// 0071526 // semaphorin-plexin signaling pathway // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0045499 // chemorepellent activity // traceable author statement /// 0045499 // chemorepellent activity // inferred from electronic annotation","chr7:83587074-83824459 (-) // 97.23 // q21.11"]
["11755053_s_at",0.005555153,-0.066124916,-0.022610664,-0.005555153,0.052459717,0.06395435,0.35812327,0.09699308,-1.0458528,-0.06467979,1.0458528,"down","ELAC2",60528,"0008033 // tRNA processing // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:12895709-12921175 (-) // 98.99 // p12"]
["11737124_a_at",-0.028193235,0.13185215,-0.111240625,0.0017638206,-0.0017640591,0.10508585,0.86268175,0.6611881,-1.0263735,-0.037555836,1.0263735,"down","BET3L",100128327,"0006810 // transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation","","chr6:116817652-116866773 (-) // 98.22 // q22.1"]
["11718829_a_at",0.30592918,0.32736874,0.13233423,-0.14384842,-0.22997808,-0.13233423,0.07194601,0.0035604239,1.341578,0.42393094,1.341578,"up","EHD1",10938,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from mutant phenotype /// 0006897 // endocytosis // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0010886 // positive regulation of cholesterol storage // inferred from sequence or structural similarity /// 0010886 // positive regulation of cholesterol storage // inferred from electronic annotation /// 0016197 // endosomal transport // inferred from electronic annotation /// 0032456 // endocytic recycling // inferred from genetic interaction /// 0032456 // endocytic recycling // inferred from mutant phenotype /// 0034383 // low-density lipoprotein particle clearance // inferred from sequence or structural similarity /// 0034383 // low-density lipoprotein particle clearance // inferred from electronic annotation /// 0042632 // cholesterol homeostasis // inferred from sequence or structural similarity /// 0042632 // cholesterol homeostasis // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from physical interaction","0005622 // intracellular // inferred from mutant phenotype /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005811 // lipid particle // inferred from sequence or structural similarity /// 0005811 // lipid particle // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0031095 // platelet dense tubular network membrane // inferred from sequence or structural similarity /// 0031095 // platelet dense tubular network membrane // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from direct assay /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from direct assay /// 0055038 // recycling endosome membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr11:64620202-64646230 (-) // 96.8 // q13.1"]
["11759085_s_at",0.13359547,-0.031722546,0.049634933,-0.12946701,0.03172207,-0.27941656,0.45609477,0.15825506,1.1299219,0.17622307,1.1299219,"up","KIAA1715",80856,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007596 // blood coagulation // inferred from electronic annotation /// 0035115 // embryonic forelimb morphogenesis // inferred from electronic annotation /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0060173 // limb development // non-traceable author statement","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:176788482-176867073 (-) // 65.74 // q31.1"]
["11759874_x_at",-0.12192869,0.34466767,-0.286613,-0.16050363,0.12192845,0.31844974,0.857345,0.6508944,-1.082662,-0.114582896,1.082662,"down","FAM175A",84142,"0006281 // DNA repair // inferred from electronic annotation /// 0006302 // double-strand break repair // inferred from mutant phenotype /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0010212 // response to ionizing radiation // inferred from mutant phenotype /// 0016568 // chromatin modification // inferred from electronic annotation /// 0031572 // G2/M transition DNA damage checkpoint // inferred from mutant phenotype /// 0045739 // positive regulation of DNA repair // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0070531 // BRCA1-A complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0031593 // polyubiquitin binding // inferred from direct assay","chr4:84399964-84406218 (-) // 25.0 // q21.23"]
["11737287_at",0.26266742,-0.0047266483,0.0047266483,-0.0047266483,-0.015727997,0.09174585,0.7928691,0.53466535,1.0452094,0.06379201,1.0452094,"up","GALR1",2587,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007194 // negative regulation of adenylate cyclase activity // traceable author statement /// 0007218 // neuropeptide signaling pathway // traceable author statement /// 0007586 // digestion // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004966 // galanin receptor activity // inferred from electronic annotation /// 0004966 // galanin receptor activity // traceable author statement /// 0042923 // neuropeptide binding // inferred from electronic annotation","chr18:74962007-74982094 (+) // 99.82 // q23"]
["11717784_a_at",0.23899841,0.058693886,0.052315712,-0.052315712,-0.29869747,-0.38280106,0.21799032,0.036205612,1.2845598,0.3612741,1.2845598,"up","THYN1",29087,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","","chr11:134118172-134123263 (-) // 96.05 // q25"]
["11743954_a_at",0.008785248,-0.12386799,-0.30834484,0.13048077,0.09002304,-0.008785248,0.3702812,0.10368173,-1.1580644,-0.21171544,1.1580644,"down","EHBP1L1",254102,"","","","chr11:65343506-65360116 (+) // 98.22 // q13.1"]
["11722047_a_at",-0.02033472,0.02033472,0.12940264,0.19225502,-0.14046717,-0.036275387,0.9018768,0.7428253,1.0266635,0.037963457,1.0266635,"up","C2orf43",60526,"","","","chr2:20884577-21022883 (-) // 97.76 // p24.1"]
["11742096_x_at",-0.03977871,0.042459488,0.088712215,0.03977871,-0.27971935,-0.060488224,0.5873302,0.2677761,1.0947545,0.13060732,1.0947545,"up","SCLY /// UBE2F-SCLY","100533179 /// 51540","0006520 // cellular amino acid metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0009000 // selenocysteine lyase activity // inferred from electronic annotation /// 0009000 // selenocysteine lyase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation","chr2:238969631-239008053 (+) // 99.27 // q37.3"]
["11752175_x_at",0.011228561,-0.0139398575,0.14112854,0.16939926,-0.011228561,-0.11469841,0.9086492,0.757988,1.0221794,0.03164837,1.0221794,"up","DBF4",10926,"0000075 // cell cycle checkpoint // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008047 // enzyme activator activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:87505543-87537691 (+) // 93.27 // q21.12"]
["11750477_s_at",-0.3094988,0.014858723,0.12729692,-0.15269852,-0.014858723,0.2770934,0.85126853,0.6391324,-1.0660633,-0.09229308,1.0660633,"down","THEM6",51337,"","0005576 // extracellular region // inferred from electronic annotation","","chr8:143808687-143818343 (+) // 89.53 // q24.3"]
["11719939_a_at",-0.086084366,0.05605316,0.105246544,-0.05605316,0.094944954,-0.08061409,0.8565043,0.6491639,1.0273867,0.038979255,1.0273867,"up","CAND1",55832,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0030154 // cell differentiation // inferred from direct assay /// 0043086 // negative regulation of catalytic activity // inferred from direct assay /// 0045899 // positive regulation of RNA polymerase II transcriptional preinitiation complex assembly // inferred from electronic annotation","0000151 // ubiquitin ligase complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0017025 // TBP-class protein binding // inferred from electronic annotation","chr12:67663060-67708688 (+) // 96.57 // q14.3"]
["11727452_x_at",0.018260956,-0.0809927,-0.018260956,0.17738056,0.06171608,-0.053834915,0.60954624,0.28958845,-1.0634495,-0.088751525,1.0634495,"down","FAM21A /// FAM21C","253725 /// 387680","0006810 // transport // inferred from electronic annotation /// 0042147 // retrograde transport, endosome to Golgi // inferred from sequence or structural similarity /// 0042147 // retrograde transport, endosome to Golgi // inferred from mutant phenotype","0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from sequence or structural similarity /// 0005769 // early endosome // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0071203 // WASH complex // inferred from sequence or structural similarity /// 0071203 // WASH complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr10:46222579-46288412 (+) // 97.82 // q11.22 /// chr10:51827579-51893269 (+) // 97.04 // q11.23"]
["11716681_at",0.3636341,0.035899162,0.18318129,-0.035899162,-0.33709097,-0.29519606,0.21574968,0.03550709,1.3351177,0.41696692,1.3351177,"up","SLC39A9",55334,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006829 // zinc ion transport // inferred from electronic annotation /// 0030001 // metal ion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0046873 // metal ion transmembrane transporter activity // inferred from electronic annotation","chr14:69865074-69929107 (+) // 97.91 // q24.1"]
["11744449_a_at",0.5200596,-0.033168793,-0.22484684,-0.08134174,0.033168793,0.25164175,0.9792221,0.94000185,1.0136257,0.019525068,1.0136257,"up","ARHGAP4",393,"0006915 // apoptotic process // traceable author statement /// 0007010 // cytoskeleton organization // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0032321 // positive regulation of Rho GTPase activity // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005925 // focal adhesion // inferred from direct assay","0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chrX:153172829-153191714 (-) // 98.25 // q28"]
["11728512_a_at",0.14035797,0.19116402,0.051012993,-0.064741135,-0.051012993,-0.2242651,0.18244188,0.02518376,1.1816899,0.24085143,1.1816899,"up","TRAF5",7188,"0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0009898 // internal side of plasma membrane // inferred from sequence or structural similarity /// 0035631 // CD40 receptor complex // inferred from sequence or structural similarity","0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0031996 // thioesterase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:211519447-211548375 (+) // 83.83 // q32.3"]
["11755415_a_at",0.093037605,0.047881126,0.033985138,-0.08282566,-0.033985138,-0.09122658,0.09916589,0.0071772053,1.0925105,0.12764709,1.0925105,"up","EIF2B4",8890,"0001541 // ovarian follicle development // inferred from mutant phenotype /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // traceable author statement /// 0006413 // translational initiation // inferred from electronic annotation /// 0006417 // regulation of translation // non-traceable author statement /// 0006446 // regulation of translational initiation // not recorded /// 0009408 // response to heat // inferred from sequence or structural similarity /// 0009408 // response to heat // traceable author statement /// 0009749 // response to glucose stimulus // inferred from sequence or structural similarity /// 0010467 // gene expression // traceable author statement /// 0014003 // oligodendrocyte development // inferred from mutant phenotype /// 0019509 // L-methionine salvage from methylthioadenosine // not recorded /// 0032057 // negative regulation of translational initiation in response to stress // inferred from sequence or structural similarity /// 0042552 // myelination // inferred from mutant phenotype /// 0043434 // response to peptide hormone stimulus // inferred from sequence or structural similarity /// 0044237 // cellular metabolic process // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045947 // negative regulation of translational initiation // not recorded /// 0051716 // cellular response to stimulus // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005851 // eukaryotic translation initiation factor 2B complex // inferred from direct assay","0003743 // translation initiation factor activity // inferred from direct assay /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0031369 // translation initiation factor binding // inferred from sequence or structural similarity /// 0046523 // S-methyl-5-thioribose-1-phosphate isomerase activity // not recorded","chr2:27587229-27593178 (-) // 96.88 // p23.3"]
["11728346_a_at",0.0058927536,-0.03403306,0.26705575,-0.05745554,-0.0058927536,0.2527585,0.9672963,0.9083572,1.0115038,0.016501762,1.0115038,"up","PRMT8",56341,"0006479 // protein methylation // inferred from electronic annotation /// 0016571 // histone methylation // inferred from direct assay /// 0018216 // peptidyl-arginine methylation // inferred from direct assay /// 0019919 // peptidyl-arginine methylation, to asymmetrical-dimethyl arginine // inferred from direct assay /// 0032259 // methylation // inferred from electronic annotation /// 0034969 // histone arginine methylation // inferred from direct assay /// 0043393 // regulation of protein binding // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008276 // protein methyltransferase activity // inferred from electronic annotation /// 0008469 // histone-arginine N-methyltransferase activity // inferred from direct assay /// 0008757 // S-adenosylmethionine-dependent methyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0035241 // protein-arginine omega-N monomethyltransferase activity // inferred from direct assay /// 0035242 // protein-arginine omega-N asymmetric methyltransferase activity // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay","chr12:3599849-3703136 (+) // 95.47 // p13.32"]
["11721991_a_at",0.05601263,0.07716608,-0.02763462,0.004798889,-0.09034109,-0.004798889,0.5267683,0.21219258,1.0462989,0.065294996,1.0462989,"up","SLC6A6",6533,"0006520 // cellular amino acid metabolic process // traceable author statement /// 0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0006865 // amino acid transport // traceable author statement /// 0015734 // taurine transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005328 // neurotransmitter:sodium symporter activity // inferred from electronic annotation /// 0005368 // taurine transmembrane transporter activity // inferred from electronic annotation /// 0005369 // taurine:sodium symporter activity // inferred from electronic annotation /// 0005369 // taurine:sodium symporter activity // traceable author statement /// 0015293 // symporter activity // inferred from electronic annotation /// 0030977 // taurine binding // inferred from electronic annotation","chr3:14444108-14530857 (+) // 94.05 // p25.1"]
["11727317_at",-0.102499485,0.08453083,0.04523897,-0.15355444,-0.04523897,0.3936243,0.91238886,0.76775455,-1.0394739,-0.05585352,1.0394739,"down","KCNE1L",23630,"0008016 // regulation of heart contraction // traceable author statement","0008076 // voltage-gated potassium channel complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation","chrX:108866928-108868397 (-) // 97.61 // q23"]
["11763094_at",-0.13017368,-0.1386013,-0.0027952194,0.10710573,0.0027952194,0.15632343,0.24771555,0.04676982,-1.1323068,-0.17926493,1.1323068,"down",0.10710573,0.0027952194,0.15632343,-0.13017368,-0.1386013,-0.0027952194]
["11718380_s_at",0.60162354,0.03714609,-0.07693672,0.38672495,-0.0866642,-0.03714657,0.89049333,0.71902895,1.0715058,0.09963964,1.0715058,"up","DGKZ",8525,"0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // non-traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0031571 // mitotic cell cycle G1/S transition DNA damage checkpoint // inferred from genetic interaction /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0045930 // negative regulation of mitotic cell cycle // inferred from genetic interaction /// 0046580 // negative regulation of Ras protein signal transduction // inferred from electronic annotation /// 0046834 // lipid phosphorylation // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0001727 // lipid kinase activity // inferred from direct assay /// 0004143 // diacylglycerol kinase activity // inferred from direct assay /// 0004143 // diacylglycerol kinase activity // inferred from electronic annotation /// 0004857 // enzyme inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // traceable author statement /// 0008022 // protein C-terminus binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:46383144-46402101 (+) // 98.89 // p11.2"]
["11724000_a_at",0.11789656,-0.0021157265,0.030519485,-0.072705746,0.0021157265,-0.041454315,0.37952372,0.10893834,1.0615077,0.08611484,1.0615077,"up","ZNF581",51545,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:56154912-56156989 (+) // 97.45 // q13.42"]
["11724775_at",0.08657837,-0.16482925,0.06963253,-0.025026798,-0.13953447,0.025026798,0.86609113,0.66862816,1.0307102,0.04363878,1.0307102,"up","FDX1",2230,"0006091 // generation of precursor metabolites and energy // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0030325 // adrenal gland development // inferred from electronic annotation /// 0034698 // response to gonadotropin stimulus // inferred from electronic annotation /// 0044320 // cellular response to leptin stimulus // inferred from electronic annotation /// 0044321 // response to leptin stimulus // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051353 // positive regulation of oxidoreductase activity // inferred from electronic annotation /// 0070995 // NADPH oxidation // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0071872 // cellular response to epinephrine stimulus // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0030061 // mitochondrial crista // inferred from electronic annotation","0005506 // iron ion binding // inferred from electronic annotation /// 0005506 // iron ion binding // traceable author statement /// 0008386 // cholesterol monooxygenase (side-chain-cleaving) activity // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0009055 // electron carrier activity // traceable author statement /// 0015039 // NADPH-adrenodoxin reductase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation","chr11:110300223-110335605 (+) // 71.23 // q22.3"]
["11750084_a_at",-0.077486515,0.051489115,0.16837811,-0.051489353,0.120615244,-0.15816498,0.78068763,0.5140734,1.0549246,0.0771399,1.0549246,"up","FAM69A",388650,"","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:93298452-93427057 (-) // 87.64 // p22.1"]
["11761456_at",0.0155649185,-0.086434364,-0.0155649185,-0.12718296,0.036491394,0.034521103,0.95739627,0.87876195,-1.0070169,-0.0100878915,1.0070169,"down","AKAP13",11214,"0006915 // apoptotic process // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0004691 // cAMP-dependent protein kinase activity // non-traceable author statement /// 0004871 // signal transducer activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:85923870-86079988 (+) // 58.47 // q25.3"]
["11752892_x_at",-0.2738905,0.005015373,0.124307156,-0.13501978,-0.005015373,0.12401295,0.9148477,0.77434194,-1.0301459,-0.042848658,1.0301459,"down","LILRA2",11027,"0006952 // defense response // traceable author statement /// 0007165 // signal transduction // traceable author statement","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003823 // antigen binding // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement","chr19:55085307-55098862 (+) // 99.86 // q13.42"]
["11757210_x_at",0.044393063,0.0033621788,-0.03814411,-0.030236244,0.020292282,-0.0033626556,0.924228,0.7980839,1.0053092,0.00763933,1.0053092,"up","ASMTL-AS1",80161,"","","","chrX:1520354-1534314 (+) // 58.47 // p22.33 /// chrY:1470354-1484314 (+) // 58.47 // p11.32"]
["11727473_at",-0.16156173,0.006611824,-0.006611824,-0.006611824,0.1566968,0.13523245,0.39216685,0.11593912,-1.1087697,-0.14895968,1.1087697,"down","CLC",1178,"0007275 // multicellular organismal development // traceable author statement /// 0016042 // lipid catabolic process // inferred from electronic annotation","","0004091 // carboxylesterase activity // inferred from electronic annotation /// 0004622 // lysophospholipase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr19:40221894-40228669 (-) // 92.12 // q13.2"]
["11762558_at",-0.19781303,0.00845623,0.1016531,-0.00845623,-0.07719135,0.1285429,0.8844168,0.70538116,-1.0306346,-0.04353299,1.0306346,"down","C10orf53",282966,"","","","chr10:50887731-50918307 (+) // 58.0 // q11.23"]
["11720816_a_at",-0.17373466,0.1589284,0.024896622,-0.06831932,0.019979,-0.019978523,0.92829305,0.80662024,1.0182815,0.026136387,1.0182815,"up","BAALC",79870,"","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","","chr8:104152602-104242700 (+) // 89.78 // q22.3"]
["11725164_at",0.1505785,-0.049383163,0.17254043,-0.044389248,-0.18016171,0.044389248,0.49997905,0.19074917,1.1105691,0.15129918,1.1105691,"up","C7orf31",136895,"","","","chr7:25174306-25219919 (-) // 80.14 // p15.3"]
["11718189_at",0.13609266,-0.21181059,-0.4594612,0.63324356,0.26517963,-0.13609266,0.51046693,0.1991227,-1.3495731,-0.43250316,1.3495731,"down","FOXJ2",55810,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007389 // pattern specification process // not recorded /// 0009790 // embryo development // not recorded /// 0009888 // tissue development // not recorded /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0048513 // organ development // not recorded /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // not recorded","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // not recorded /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // not recorded /// 0008134 // transcription factor binding // not recorded /// 0008301 // DNA binding, bending // not recorded /// 0019904 // protein domain specific binding // not recorded /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr12:8185189-8208113 (+) // 92.87 // p13.31"]
["11733089_at",0.13070107,-0.05981922,0.073628426,0.05981922,-0.12827206,-0.33613682,0.5411635,0.22454073,1.1352683,0.18303333,1.1352683,"up","ZNF277",11179,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:111846642-111983989 (+) // 81.29 // q31.1"]
["11717238_a_at",-0.0032396317,0.011043549,0.0032396317,0.08098221,-0.06707001,-0.10486698,0.820343,0.58208084,1.0238465,0.033999447,1.0238465,"up","AMD1",262,"0006557 // S-adenosylmethioninamine biosynthetic process // inferred from electronic annotation /// 0006595 // polyamine metabolic process // traceable author statement /// 0006596 // polyamine biosynthetic process // inferred from electronic annotation /// 0006597 // spermine biosynthetic process // inferred from electronic annotation /// 0006597 // spermine biosynthetic process // non-traceable author statement /// 0008295 // spermidine biosynthetic process // inferred from electronic annotation /// 0008295 // spermidine biosynthetic process // non-traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005829 // cytosol // traceable author statement","0004014 // adenosylmethionine decarboxylase activity // inferred from electronic annotation /// 0004014 // adenosylmethionine decarboxylase activity // traceable author statement /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation","chr6:111195987-111217547 (+) // 91.68 // q21"]
["11733110_s_at",0.021178246,-0.12636948,0.03598404,0.22195244,-0.021178246,-0.15424252,0.9120859,0.7671345,-1.0271021,-0.03857962,1.0271021,"down","TLK1",9874,"0001672 // regulation of chromatin assembly or disassembly // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006886 // intracellular protein transport // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // non-traceable author statement /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr2:171847332-172017450 (-) // 94.05 // q31.1"]
["11731197_a_at",-0.13463116,0.008468151,0.2425623,-0.21658468,0.009725094,-0.008467674,0.7374314,0.44852012,1.0796589,0.11057554,1.0796589,"up","PRR5L",79899,"","0005739 // mitochondrion // inferred from electronic annotation","","chr11:36397534-36486753 (+) // 99.5 // p13"]
["11743478_a_at",0.10980511,0.14190769,0.14038754,-0.10980511,-0.25449085,-0.22101593,0.054409333,0.0019254482,1.2533628,0.32580405,1.2533628,"up","FYTTD1",84248,"0006406 // mRNA export from nucleus // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr3:197476682-197511173 (+) // 92.03 // q29"]
["11723816_at",0.003979206,-0.32596254,-0.003979206,-0.21295023,0.14384508,0.17035675,0.72784555,0.43569088,-1.1037433,-0.14240469,1.1037433,"down","ARHGAP29",9411,"0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // traceable author statement /// 0032321 // positive regulation of Rho GTPase activity // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:94633943-94703302 (-) // 75.11 // p22.1"]
["11742946_s_at",0.018427849,-0.050387383,-0.018427849,0.23992825,0.08698177,-0.021180153,0.516651,0.2041435,-1.0857604,-0.11870571,1.0857604,"down","UBE2E3",10477,"0016567 // protein ubiquitination // inferred from electronic annotation /// 0040008 // regulation of growth // inferred from electronic annotation /// 0070534 // protein K63-linked ubiquitination // inferred from direct assay /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation","chr2:181845329-181928361 (+) // 97.34 // q31.3"]
["11722096_a_at",0.0835762,0.037045956,-0.037045956,0.23949909,-0.054674625,-0.05960512,0.96481127,0.90115464,-1.009668,-0.013880972,1.009668,"down","EIF4ENIF1",56478,"0006413 // translational initiation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008565 // protein transporter activity // traceable author statement","chr22:31835348-31885573 (-) // 94.8 // q12.2"]
["11761546_a_at",0.015264273,0.34922004,-0.015264511,-0.2416451,0.21475244,-0.15175104,0.69341844,0.38832057,1.1297116,0.17595455,1.1297116,"up","HDGFL1",154150,"","","","chr6:22569770-22571161 (+) // 92.97 // p22.3"]
["11726023_a_at",-0.009293556,0.19814491,0.17840385,-0.09761429,-0.105112076,0.009293556,0.30149615,0.069095425,1.138312,0.18689601,1.138312,"up","EDN1",1906,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001501 // skeletal system development // inferred from electronic annotation /// 0001516 // prostaglandin biosynthetic process // inferred from direct assay /// 0001569 // patterning of blood vessels // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001821 // histamine secretion // inferred from electronic annotation /// 0003100 // regulation of systemic arterial blood pressure by endothelin // inferred from direct assay /// 0006885 // regulation of pH // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from direct assay /// 0007186 // G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from direct assay /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0007267 // cell-cell signaling // inferred from direct assay /// 0007507 // heart development // inferred from electronic annotation /// 0007585 // respiratory gaseous exchange // inferred from electronic annotation /// 0007589 // body fluid secretion // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009953 // dorsal/ventral pattern formation // inferred from electronic annotation /// 0010259 // multicellular organismal aging // inferred from electronic annotation /// 0010460 // positive regulation of heart rate // inferred from direct assay /// 0010595 // positive regulation of endothelial cell migration // traceable author statement /// 0010613 // positive regulation of cardiac muscle hypertrophy // inferred from direct assay /// 0010870 // positive regulation of receptor biosynthetic process // inferred from direct assay /// 0014032 // neural crest cell development // inferred from electronic annotation /// 0014065 // phosphatidylinositol 3-kinase cascade // inferred from direct assay /// 0014824 // artery smooth muscle contraction // inferred from direct assay /// 0014824 // artery smooth muscle contraction // traceable author statement /// 0014826 // vein smooth muscle contraction // inferred from direct assay /// 0015758 // glucose transport // inferred from electronic annotation /// 0016049 // cell growth // inferred from electronic annotation /// 0019229 // regulation of vasoconstriction // inferred from electronic annotation /// 0019233 // sensory perception of pain // inferred from electronic annotation /// 0019722 // calcium-mediated signaling // inferred from direct assay /// 0030072 // peptide hormone secretion // inferred from direct assay /// 0030185 // nitric oxide transport // inferred from direct assay /// 0030195 // negative regulation of blood coagulation // traceable author statement /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030593 // neutrophil chemotaxis // inferred from direct assay /// 0030818 // negative regulation of cAMP biosynthetic process // inferred from electronic annotation /// 0031583 // phospholipase D-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0032269 // negative regulation of cellular protein metabolic process // inferred from direct assay /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0033574 // response to testosterone stimulus // inferred from electronic annotation /// 0034392 // negative regulation of smooth muscle cell apoptotic process // inferred from electronic annotation /// 0035094 // response to nicotine // inferred from electronic annotation /// 0035810 // positive regulation of urine volume // inferred from electronic annotation /// 0035815 // positive regulation of renal sodium excretion // inferred from electronic annotation /// 0042045 // epithelial fluid transport // inferred from electronic annotation /// 0042310 // vasoconstriction // inferred from direct assay /// 0042310 // vasoconstriction // inferred from electronic annotation /// 0042313 // protein kinase C deactivation // inferred from direct assay /// 0042474 // middle ear morphogenesis // inferred from electronic annotation /// 0042482 // positive regulation of odontogenesis // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042554 // superoxide anion generation // inferred from electronic annotation /// 0043179 // rhythmic excitation // inferred from electronic annotation /// 0043200 // response to amino acid stimulus // inferred from electronic annotation /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0043507 // positive regulation of JUN kinase activity // inferred from direct assay /// 0045321 // leukocyte activation // traceable author statement /// 0045429 // positive regulation of nitric oxide biosynthetic process // traceable author statement /// 0045793 // positive regulation of cell size // inferred from direct assay /// 0045840 // positive regulation of mitosis // inferred from direct assay /// 0045987 // positive regulation of smooth muscle contraction // inferred from electronic annotation /// 0046887 // positive regulation of hormone secretion // inferred from direct assay /// 0046888 // negative regulation of hormone secretion // inferred from electronic annotation /// 0048016 // inositol phosphate-mediated signaling // inferred from direct assay /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from direct assay /// 0050880 // regulation of blood vessel size // inferred from electronic annotation /// 0051216 // cartilage development // inferred from electronic annotation /// 0051482 // elevation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway // inferred from electronic annotation /// 0051771 // negative regulation of nitric-oxide synthase biosynthetic process // inferred from direct assay /// 0051899 // membrane depolarization // inferred from electronic annotation /// 0051930 // regulation of sensory perception of pain // inferred from electronic annotation /// 0060137 // maternal process involved in parturition // inferred from electronic annotation /// 0060298 // positive regulation of sarcomere organization // inferred from mutant phenotype /// 0060585 // positive regulation of prostaglandin-endoperoxide synthase activity // inferred from mutant phenotype /// 0070101 // positive regulation of chemokine-mediated signaling pathway // inferred by curator /// 0071347 // cellular response to interleukin-1 // inferred from electronic annotation /// 0071356 // cellular response to tumor necrosis factor // inferred from electronic annotation /// 0090023 // positive regulation of neutrophil chemotaxis // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay","0005102 // receptor binding // inferred from electronic annotation /// 0005125 // cytokine activity // inferred from direct assay /// 0005179 // hormone activity // inferred from direct assay /// 0031707 // endothelin A receptor binding // inferred from direct assay /// 0031707 // endothelin A receptor binding // inferred from electronic annotation /// 0031708 // endothelin B receptor binding // inferred from direct assay /// 0031708 // endothelin B receptor binding // inferred from electronic annotation","chr6:12290311-12297426 (+) // 98.8 // p24.1"]
["11748650_a_at",-0.19620419,-0.052482605,0.052482605,-0.06126833,0.14378738,0.17219353,0.53376865,0.21817292,-1.1098045,-0.15030557,1.1098045,"down","ADAM33",80332,"0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // non-traceable author statement /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // non-traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:3649228-3662698 (-) // 98.61 // p13"]
["11752491_x_at",0.0035247803,-0.1653552,-0.05212736,0.11465216,-0.003525257,0.009245396,0.4424005,0.14774448,-1.0803086,-0.11144343,1.0803086,"down","TOM1",10043,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006897 // endocytosis // non-traceable author statement /// 0015031 // protein transport // non-traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016197 // endosomal transport // non-traceable author statement /// 0016197 // endosomal transport // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // traceable author statement /// 0005768 // endosome // traceable author statement /// 0005769 // early endosome // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr22:35695886-35743621 (+) // 98.88 // q12.3"]
["11720861_a_at",-0.23776436,-0.27933788,-0.06588411,0.06588411,0.10337496,0.1570921,0.12948711,0.012645932,-1.2338034,-0.3031125,1.2338034,"down","ARHGEF3",50650,"0006915 // apoptotic process // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // traceable author statement /// 0005543 // phospholipid binding // inferred from electronic annotation","chr3:56761447-56809839 (-) // 98.37 // p14.3"]
["11715843_at",-0.22186947,0.016311646,0.058751106,-0.17452621,0.11092663,-0.016311646,0.9503355,0.86183375,-1.0155762,-0.022298552,1.0155762,"down","MAPK1",5594,"0000165 // MAPK cascade // traceable author statement /// 0000165 // MAPK cascade // inferred from electronic annotation /// 0000186 // activation of MAPKK activity // traceable author statement /// 0000187 // activation of MAPK activity // traceable author statement /// 0000189 // MAPK import into nucleus // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0006935 // chemotaxis // traceable author statement /// 0006950 // response to stress // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009636 // response to toxin // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010800 // positive regulation of peptidyl-threonine phosphorylation // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0019233 // sensory perception of pain // inferred from electronic annotation /// 0019858 // cytosine metabolic process // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032872 // regulation of stress-activated MAPK cascade // traceable author statement /// 0033598 // mammary gland epithelial cell proliferation // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0042221 // response to chemical stimulus // inferred from electronic annotation /// 0043330 // response to exogenous dsRNA // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050852 // T cell receptor signaling pathway // inferred from electronic annotation /// 0050853 // B cell receptor signaling pathway // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0051493 // regulation of cytoskeleton organization // traceable author statement /// 0060397 // JAK-STAT cascade involved in growth hormone signaling pathway // traceable author statement /// 0060716 // labyrinthine layer blood vessel development // inferred from electronic annotation /// 0070371 // ERK1 and ERK2 cascade // inferred from direct assay /// 0070371 // ERK1 and ERK2 cascade // traceable author statement /// 0072584 // caveolin-mediated endocytosis // traceable author statement /// 0090170 // regulation of Golgi inheritance // traceable author statement /// 2000641 // regulation of early endosome to late endosome transport // traceable author statement","0005625 // soluble fraction // inferred from electronic annotation /// 0005626 // insoluble fraction // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005769 // early endosome // traceable author statement /// 0005770 // late endosome // traceable author statement /// 0005794 // Golgi apparatus // traceable author statement /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005901 // caveola // traceable author statement /// 0005925 // focal adhesion // traceable author statement /// 0031143 // pseudopodium // inferred from electronic annotation /// 0032839 // dendrite cytoplasm // inferred from electronic annotation /// 0033267 // axon part // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0001784 // phosphotyrosine binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004707 // MAP kinase activity // inferred from electronic annotation /// 0004707 // MAP kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008353 // RNA polymerase II carboxy-terminal domain kinase activity // inferred from sequence or structural similarity /// 0008353 // RNA polymerase II carboxy-terminal domain kinase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019902 // phosphatase binding // inferred from physical interaction /// 0031435 // mitogen-activated protein kinase kinase kinase binding // inferred from electronic annotation","chr22:22108791-22221970 (-) // 87.22 // q11.21"]
["11742846_a_at",-0.14749146,0.07066345,0.060483932,0.06324005,-0.060483932,-0.09264183,0.92058194,0.788575,1.0171369,0.024513913,1.0171369,"up","CUL4B",8450,"0006281 // DNA repair // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // non-traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0031461 // cullin-RING ubiquitin ligase complex // inferred from electronic annotation /// 0031465 // Cul4B-RING ubiquitin ligase complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from electronic annotation","chrX:119658443-119709684 (-) // 98.51 // q24"]
["11717525_s_at",0.0129823685,-0.04881668,0.019358635,0.2059679,-0.0129823685,-0.052060127,0.8092745,0.5624557,-1.0370368,-0.052467056,1.0370368,"down","RDX",5962,"0030033 // microvillus assembly // inferred from electronic annotation /// 0045176 // apical protein localization // inferred from electronic annotation /// 0051693 // actin filament capping // inferred from electronic annotation","0001726 // ruffle // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005902 // microvillus // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0019898 // extrinsic to membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0032420 // stereocilium // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation","chr11:110100174-110167701 (-) // 92.23 // q22.3"]
["11733842_a_at",0.30931854,0.056684494,0.06879711,-0.056684494,-0.11146736,-0.10487461,0.25272217,0.04847231,1.1776756,0.2359422,1.1776756,"up","SSSCA1",10534,"0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007067 // mitosis // traceable author statement /// 0051301 // cell division // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation","0016787 // hydrolase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation","chr11:65337900-65340276 (+) // 85.26 // q13.1"]
["11716546_s_at",0.21867466,0.104626656,-0.08003998,0.08003998,-0.23953342,-0.22001553,0.51079047,0.19939753,1.1547576,0.20759006,1.1547576,"up","DRAP1",10589,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // traceable author statement /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr11:65686727-65689017 (+) // 93.03 // q13.1"]
["11738049_a_at",-0.052257538,0.043168545,-0.096785545,-0.02188301,0.02188301,0.0735445,0.61476755,0.2947449,-1.0423259,-0.059806366,1.0423259,"down","ATP2C2",9914,"0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0034220 // ion transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005388 // calcium-transporting ATPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:84402128-84497793 (+) // 97.39 // q24.1"]
["11753697_x_at",-0.20069695,-0.098817825,0.098817825,-0.10768986,0.10525608,0.10525608,0.7174537,0.42121422,-1.0726453,-0.101173095,1.0726453,"down","FCRLA",84824,"0030154 // cell differentiation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr1:161677054-161683251 (+) // 99.56 // q23.3"]
["11754568_s_at",0.05628872,0.035629272,0.014304161,-0.19719887,-0.07897186,-0.014304161,0.31152984,0.07366986,1.0959883,0.13223237,1.0959883,"up","FOXRED1",55572,"0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016491 // oxidoreductase activity // inferred from electronic annotation","chr11:126142928-126148027 (+) // 80.21 // q24.2"]
["11733925_a_at",0.04807377,-0.02192688,-0.09474945,0.02192688,-0.08203697,0.053164482,0.90105,0.74119776,-1.0143478,-0.020552397,1.0143478,"down","RIOK1",83732,"0008152 // metabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr6:7389707-7418268 (+) // 96.32 // p24.3"]
["11734733_a_at",0.2311287,-0.12541103,0.044618607,-0.020439148,-0.282938,0.020439148,0.67210627,0.3609288,1.1052898,0.1444247,1.1052898,"up","SLC13A3",64849,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006835 // dicarboxylic acid transport // inferred from electronic annotation /// 0015744 // succinate transport // inferred from electronic annotation /// 0015746 // citrate transport // inferred from electronic annotation /// 0015810 // aspartate transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0071422 // succinate transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005626 // insoluble fraction // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0005310 // dicarboxylic acid transmembrane transporter activity // inferred from electronic annotation /// 0005343 // organic acid:sodium symporter activity // inferred from electronic annotation /// 0015137 // citrate transmembrane transporter activity // inferred from electronic annotation /// 0015141 // succinate transmembrane transporter activity // inferred from electronic annotation /// 0015183 // L-aspartate transmembrane transporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation /// 0015362 // high affinity sodium:dicarboxylate symporter activity // inferred from electronic annotation /// 0017153 // sodium:dicarboxylate symporter activity // inferred from electronic annotation","chr20:45186462-45280098 (-) // 88.6 // q13.12"]
["11728108_a_at",-0.14757252,0.03183222,-0.12962627,-0.017036915,0.017036915,0.21540737,0.47381833,0.1711866,-1.112335,-0.1535913,1.112335,"down","GHRL",51738,"0000187 // activation of MAPK activity // inferred from mutant phenotype /// 0001696 // gastric acid secretion // inferred from electronic annotation /// 0001937 // negative regulation of endothelial cell proliferation // inferred from direct assay /// 0006006 // glucose metabolic process // non-traceable author statement /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from sequence or structural similarity /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from sequence or structural similarity /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0008154 // actin polymerization or depolymerization // inferred from direct assay /// 0008343 // adult feeding behavior // inferred from sequence or structural similarity /// 0008343 // adult feeding behavior // inferred from electronic annotation /// 0009725 // response to hormone stimulus // inferred from direct assay /// 0009755 // hormone-mediated signaling pathway // traceable author statement /// 0016358 // dendrite development // inferred from direct assay /// 0016358 // dendrite development // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // non-traceable author statement /// 0030252 // growth hormone secretion // traceable author statement /// 0032024 // positive regulation of insulin secretion // inferred from sequence or structural similarity /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0032095 // regulation of response to food // inferred from electronic annotation /// 0032097 // positive regulation of response to food // inferred from electronic annotation /// 0032100 // positive regulation of appetite // inferred from sequence or structural similarity /// 0032100 // positive regulation of appetite // inferred from electronic annotation /// 0032691 // negative regulation of interleukin-1 beta production // inferred from direct assay /// 0040013 // negative regulation of locomotion // inferred from electronic annotation /// 0040018 // positive regulation of multicellular organism growth // inferred by curator /// 0042127 // regulation of cell proliferation // inferred from direct assay /// 0042322 // negative regulation of circadian sleep/wake cycle, REM sleep // inferred from direct assay /// 0042536 // negative regulation of tumor necrosis factor biosynthetic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043400 // cortisol secretion // non-traceable author statement /// 0043627 // response to estrogen stimulus // inferred from direct assay /// 0045409 // negative regulation of interleukin-6 biosynthetic process // inferred from direct assay /// 0046010 // positive regulation of circadian sleep/wake cycle, non-REM sleep // inferred from direct assay /// 0046676 // negative regulation of insulin secretion // inferred from electronic annotation /// 0046697 // decidualization // inferred from direct assay /// 0050728 // negative regulation of inflammatory response // inferred from direct assay /// 0051216 // cartilage development // non-traceable author statement /// 0051461 // positive regulation of corticotropin secretion // inferred from direct assay /// 0051464 // positive regulation of cortisol secretion // inferred from direct assay /// 0051965 // positive regulation of synapse assembly // inferred from direct assay /// 0051965 // positive regulation of synapse assembly // inferred from electronic annotation /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from electronic annotation /// 0060124 // positive regulation of growth hormone secretion // inferred from direct assay /// 0060399 // positive regulation of growth hormone receptor signaling pathway // inferred by curator /// 0061098 // positive regulation of protein tyrosine kinase activity // inferred from mutant phenotype","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0030141 // secretory granule // traceable author statement /// 0030424 // axon // inferred from direct assay","0001664 // G-protein coupled receptor binding // inferred from sequence or structural similarity /// 0001664 // G-protein coupled receptor binding // inferred from electronic annotation /// 0005179 // hormone activity // inferred from electronic annotation /// 0016608 // growth hormone-releasing hormone activity // inferred from electronic annotation /// 0016608 // growth hormone-releasing hormone activity // inferred from sequence or structural similarity /// 0016608 // growth hormone-releasing hormone activity // traceable author statement /// 0030296 // protein tyrosine kinase activator activity // inferred from mutant phenotype /// 0031768 // ghrelin receptor binding // inferred from sequence or structural similarity /// 0031768 // ghrelin receptor binding // traceable author statement /// 0031768 // ghrelin receptor binding // inferred from electronic annotation","chr3:10327358-10334631 (-) // 88.35 // p25.3"]
["11736836_at",0.23719788,0.004117489,0.08032179,-0.07847309,-0.004117489,-0.08549309,0.34571487,0.09017481,1.1197994,0.16324028,1.1197994,"up","TPCN2",219931,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from direct assay /// 0006939 // smooth muscle contraction // inferred from sequence or structural similarity /// 0006939 // smooth muscle contraction // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0051209 // release of sequestered calcium ion into cytosol // inferred from electronic annotation /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from sequence or structural similarity /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005245 // voltage-gated calcium channel activity // inferred from sequence or structural similarity /// 0005245 // voltage-gated calcium channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0072345 // NAADP-sensitive calcium-release channel activity // inferred from direct assay /// 0072345 // NAADP-sensitive calcium-release channel activity // inferred from electronic annotation","chr11:68816349-68858173 (+) // 76.0 // q13.3"]
["11750176_x_at",0.03090477,-0.27279186,0.027874947,-0.06895876,-0.027875423,0.09638882,0.8082443,0.56066304,-1.0505822,-0.071189,1.0505822,"down","LOC645954",645954,"","","0003779 // actin binding // inferred from electronic annotation","chr10:30984849-31005942 (+) // 94.02 // p11.23"]
["11743714_a_at",0.0044589043,-0.017673492,-0.0044589043,0.1398201,0.08285904,-0.15665245,0.9148477,0.774589,-1.0195271,-0.027900092,1.0195271,"down","ARID4A",5926,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement","chr14:58765102-58840596 (+) // 98.96 // q23.1"]
["11731102_a_at",0.14872932,-0.15661669,0.21657228,-0.10383558,-0.056429386,0.056429386,0.73756135,0.44889385,1.0748785,0.104173526,1.0748785,"up","PFN4",375189,"0007010 // cytoskeleton organization // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation","chr2:24337704-24346347 (-) // 66.41 // p23.3"]
["11741924_a_at",0.1270647,0.043536663,0.13850927,-0.10842037,-0.15760565,-0.04353714,0.11528505,0.009834991,1.1536652,0.20622459,1.1536652,"up","GRB10",2887,"0007165 // signal transduction // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from direct assay /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // inferred from direct assay /// 0032868 // response to insulin stimulus // inferred from sequence or structural similarity /// 0042326 // negative regulation of phosphorylation // inferred from electronic annotation /// 0042327 // positive regulation of phosphorylation // inferred from sequence or structural similarity /// 0045719 // negative regulation of glycogen biosynthetic process // inferred from sequence or structural similarity /// 0046325 // negative regulation of glucose import // inferred from sequence or structural similarity /// 0046325 // negative regulation of glucose import // inferred from electronic annotation /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from electronic annotation /// 0048009 // insulin-like growth factor receptor signaling pathway // inferred from electronic annotation","0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement","0005070 // SH3/SH2 adaptor activity // inferred from electronic annotation /// 0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005158 // insulin receptor binding // inferred from sequence or structural similarity /// 0005158 // insulin receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation","chr7:50657759-50823681 (-) // 99.75 // p12.1"]
["11754814_a_at",0.048146248,0.044211388,0.028910637,-0.08532047,-0.096325874,-0.028910637,0.09778327,0.006984095,1.0796834,0.110608354,1.0796834,"up","NUP93",9688,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0010827 // regulation of glucose transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005643 // nuclear pore // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","","chr16:56870510-56878676 (+) // 81.19 // q13"]
["11744809_a_at",-0.27241397,-0.026788712,0.18740201,-0.34737206,0.026788712,0.12494302,0.96233475,0.8934254,1.0195599,0.027946481,1.0195599,"up","AS3MT /// C10orf32-AS3MT","100528007 /// 57412","0009404 // toxin metabolic process // inferred from sequence or structural similarity /// 0009404 // toxin metabolic process // inferred from electronic annotation /// 0018872 // arsonoacetate metabolic process // inferred from sequence or structural similarity /// 0018872 // arsonoacetate metabolic process // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0046685 // response to arsenic-containing substance // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation","0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030791 // arsenite methyltransferase activity // inferred from sequence or structural similarity /// 0030791 // arsenite methyltransferase activity // inferred from electronic annotation /// 0030792 // methylarsonite methyltransferase activity // inferred from sequence or structural similarity /// 0030792 // methylarsonite methyltransferase activity // inferred from electronic annotation","chr10:104629272-104661653 (+) // 96.56 // q24.32"]
["11742097_a_at",0.08116341,0.10519886,0.11446619,-0.17510271,-0.08116341,-0.11235285,0.05034783,0.0016062397,1.1672788,0.22314914,1.1672788,"up","SEC61A2",55176,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement","0015450 // P-P-bond-hydrolysis-driven protein transmembrane transporter activity // inferred from electronic annotation /// 0043022 // ribosome binding // inferred from electronic annotation","chr10:12171639-12207403 (+) // 95.9 // p14"]
["11730936_s_at",-0.28051996,-0.4154501,-0.29695702,0.28097343,0.28051996,0.3265047,0.02115785,0.00015601984,-1.5443236,-0.62697506,1.5443236,"down","AKNA",80709,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr9:117094678-117160783 (-) // 80.05 // q32"]
["11727517_a_at",-0.06274128,0.035109043,0.033892155,-0.043829918,-0.033892155,0.068339825,0.97152805,0.91928434,1.0036206,0.005214024,1.0036206,"up","TMEM79",84283,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:156252725-156262205 (+) // 96.31 // q22"]
["11733884_a_at",0.3038044,0.23604393,0.1548891,-0.18242931,-0.1548891,-0.19964218,0.037180126,0.00079903967,1.3292072,0.410566,1.3292072,"up","DEPDC1",55635,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from direct assay","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:68939836-68962904 (-) // 82.08 // p31.2"]
["11729404_a_at",-0.006312847,-0.08524752,-0.09934044,0.18275261,0.0063123703,0.025913239,0.35951507,0.097850405,-1.0983158,-0.13529298,1.0983158,"down","DOC2A",8448,"0006810 // transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0016079 // synaptic vesicle exocytosis // inferred from electronic annotation /// 0017158 // regulation of calcium ion-dependent exocytosis // inferred from mutant phenotype /// 0017158 // regulation of calcium ion-dependent exocytosis // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0005488 // binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005544 // calcium-dependent phospholipid binding // inferred from electronic annotation","chr16:30016834-30022401 (-) // 90.2 // p11.2"]
["11736244_s_at",0.2233429,0.18120003,0.22713947,-0.18120003,-0.32292938,-0.28434944,0.030317746,0.00045358465,1.3883651,0.47338706,1.3883651,"up","HIST1H2AC",8334,"0006334 // nucleosome assembly // non-traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation","0000786 // nucleosome // non-traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr6:26124396-26138605 (+) // 90.6 // p22.2"]
["11748529_x_at",-0.084409714,-0.17778683,-0.233778,0.23125076,0.09200668,0.084409714,0.113668166,0.00958256,-1.2321807,-0.30121386,1.2321807,"down","CASP4",837,"0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006917 // induction of apoptosis // traceable author statement /// 0042981 // regulation of apoptotic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0004197 // cysteine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr11:104815479-104839323 (-) // 99.92 // q22.3"]
["11717539_at",0.18105125,0.03203678,-0.03225422,0.0059986115,-0.0059986115,-0.040325165,0.635984,0.3180113,1.0524266,0.07371958,1.0524266,"up","RYBP",23429,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0035518 // histone H2A monoubiquitination // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0031519 // PcG protein complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:72423754-72496264 (-) // 91.39 // p13"]
["11722163_x_at",-0.11313152,-0.123836994,-0.061757088,0.116786,0.061757088,0.10926056,0.05054555,0.001617826,-1.1451287,-0.19550978,1.1451287,"down","PLK2",10769,"0000082 // G1/S transition of mitotic cell cycle // inferred from mutant phenotype /// 0000278 // mitotic cell cycle // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007052 // mitotic spindle organization // inferred from direct assay /// 0007093 // mitotic cell cycle checkpoint // inferred from sequence or structural similarity /// 0007093 // mitotic cell cycle checkpoint // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype /// 0007265 // Ras protein signal transduction // inferred from sequence or structural similarity /// 0007613 // memory // inferred from sequence or structural similarity /// 0007613 // memory // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032486 // Rap protein signal transduction // inferred from sequence or structural similarity /// 0043066 // negative regulation of apoptotic process // inferred from sequence or structural similarity /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype /// 0046599 // regulation of centriole replication // inferred from direct assay /// 0046599 // regulation of centriole replication // inferred from mutant phenotype /// 0048167 // regulation of synaptic plasticity // inferred from sequence or structural similarity /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0060291 // long-term synaptic potentiation // inferred from sequence or structural similarity /// 0060292 // long term synaptic depression // inferred from sequence or structural similarity","0005622 // intracellular // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005814 // centriole // inferred from direct assay /// 0005814 // centriole // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr5:57749808-57756766 (-) // 92.72 // q11.2"]
["11735240_a_at",-0.040308952,-0.011407375,0.0114068985,0.15241766,0.40199375,-0.070242405,0.5913792,0.271619,-1.1288284,-0.17482619,1.1288284,"down","ACYP2",98,"0006796 // phosphate-containing compound metabolic process // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation","0003998 // acylphosphatase activity // inferred from electronic annotation /// 0003998 // acylphosphatase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation","chr2:54342409-54532433 (+) // 93.94 // p16.2"]
["11760971_at",-0.0688355,-0.13364935,-0.37751412,0.0688355,0.15824103,0.21770072,0.19826637,0.029879438,-1.2671542,-0.3415921,1.2671542,"down","TMCO6",55374,"0006606 // protein import into nucleus // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008565 // protein transporter activity // inferred from electronic annotation","chr5:140019037-140022012 (+) // 98.85 // q31.3"]
["11717185_a_at",0.62697506,-0.13351059,0.09518719,0.52257156,-0.48136187,-0.09518719,0.82672083,0.5927873,1.1600683,0.2142097,1.1600683,"up","MEF2D",4209,"0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001958 // endochondral ossification // inferred from electronic annotation /// 0002062 // chondrocyte differentiation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007512 // adult heart development // inferred from expression pattern /// 0007517 // muscle organ development // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from direct assay /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from electronic annotation /// 0033613 // activating transcription factor binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr1:156433518-156470529 (-) // 92.07 // q22"]
["11747330_s_at",0.062191963,-0.023515701,0.01101017,0.09165573,-0.013503075,-0.01101017,0.9637176,0.898104,-1.0040413,-0.0058186343,1.0040413,"down","ACAD9",28976,"0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0030425 // dendrite // inferred from direct assay","0003995 // acyl-CoA dehydrogenase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016627 // oxidoreductase activity, acting on the CH-CH group of donors // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation","chr3:128598332-128631770 (+) // 100.0 // q21.3"]
["11720654_a_at",0.055330276,-0.03242016,0.03242016,0.28080463,-0.14925289,-0.19589615,0.9289612,0.8083721,1.0280366,0.03989162,1.0280366,"up","BBX",56987,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr3:107241782-107530171 (+) // 98.21 // q13.12"]
["11748683_x_at",0.03525114,0.31245422,0.15241814,-0.2972412,-0.035250664,-0.058856964,0.28774595,0.06252409,1.228721,0.29715738,1.228721,"up","NXN",64359,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from sequence or structural similarity /// 0031397 // negative regulation of protein ubiquitination // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0072358 // cardiovascular system development // inferred from sequence or structural similarity","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0004791 // thioredoxin-disulfide reductase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0047134 // protein-disulfide reductase activity // inferred from electronic annotation","chr17:703720-833291 (-) // 97.12 // p13.3"]
["11743031_a_at",-0.082782745,-0.038840294,-0.018157959,0.018157959,0.05587387,0.02122116,0.18364462,0.025549226,-1.0558059,-0.07834466,1.0558059,"down","S100A6",6277,"0007165 // signal transduction // traceable author statement /// 0007409 // axonogenesis // non-traceable author statement /// 0034220 // ion transmembrane transport // inferred from electronic annotation /// 0048146 // positive regulation of fibroblast proliferation // non-traceable author statement","0001726 // ruffle // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // non-traceable author statement /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031234 // extrinsic to internal side of plasma membrane // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005523 // tropomyosin binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0015075 // ion transmembrane transporter activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0044548 // S100 protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048306 // calcium-dependent protein binding // inferred from direct assay","chr1:153507082-153508717 (-) // 52.05 // q21.3"]
["11743483_a_at",0.19513512,0.013115883,-0.036761284,0.24036026,-0.013115883,-0.040335655,0.9886276,0.9661463,-1.0035689,-0.005139651,1.0035689,"down","RNASEH2B",79621,"0006401 // RNA catabolic process // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0032299 // ribonuclease H2 complex // inferred from direct assay /// 0032299 // ribonuclease H2 complex // inferred from electronic annotation","","chr13:51483813-51530898 (+) // 94.5 // q14.3"]
["11737475_at",-0.0012784004,0.18331623,-0.17859316,0.0012784004,-0.08949423,0.038968086,0.95874035,0.88216925,1.012249,0.017564207,1.012249,"up","MAB21L3",126868,"","","","chr1:116654375-116677861 (+) // 79.75 // p13.1"]
["11763945_x_at",-0.14459229,0.269269,0.30962276,-0.28677654,-0.38876152,0.14459229,0.5299301,0.21503809,1.2498443,0.3217484,1.2498443,"up","RPSAP9",653162,"","","","chr9:79013514-79014900 (-) // 76.04 // q21.13"]
["11760821_at",-0.017578602,0.21564984,0.5206256,-0.04020405,0.01757884,-0.09436846,0.4520828,0.15494336,1.2129865,0.27856344,1.2129865,"up","","","","","","chr2:73927555-73934613 (+) // 54.99 // p13.1"]
["11748581_a_at",0.19134593,0.23760247,-0.018374681,-0.09589672,-0.06749821,0.018374443,0.35873604,0.09738641,1.136973,0.18519802,1.136973,"up","C9orf11",54586,"0006897 // endocytosis // inferred from electronic annotation /// 0007342 // fusion of sperm to egg plasma membrane // inferred from electronic annotation /// 0060478 // acrosomal vesicle exocytosis // inferred from electronic annotation","0002079 // inner acrosomal membrane // inferred from electronic annotation /// 0002080 // acrosomal membrane // inferred from electronic annotation /// 0002081 // outer acrosomal membrane // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","","chr9:27292140-27297134 (-) // 95.84 // p21.2"]
["11734079_x_at",-0.2959304,-0.067043304,-0.027482033,0.027481556,0.14337349,0.12539339,0.29529545,0.06585635,-1.1719421,-0.22890131,1.1719421,"down","LONP2",83752,"0006465 // signal peptide processing // inferred from mutant phenotype /// 0006508 // proteolysis // inferred from electronic annotation /// 0006515 // misfolded or incompletely synthesized protein catabolic process // not recorded /// 0006625 // protein targeting to peroxisome // non-traceable author statement /// 0007031 // peroxisome organization // non-traceable author statement /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0031998 // regulation of fatty acid beta-oxidation // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation /// 0005782 // peroxisomal matrix // not recorded /// 0005782 // peroxisomal matrix // inferred from electronic annotation /// 0009295 // nucleoid // not recorded","0000166 // nucleotide binding // inferred from electronic annotation /// 0002020 // protease binding // inferred from physical interaction /// 0004176 // ATP-dependent peptidase activity // not recorded /// 0004176 // ATP-dependent peptidase activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // not recorded /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // not recorded /// 0005524 // ATP binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from direct assay /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // not recorded","chr16:48278210-48387425 (+) // 78.94 // q12.1"]
["11745592_a_at",0.046997547,0.0855875,-0.046998024,-0.22159863,-0.124742985,0.099785805,0.6581151,0.34296373,1.0797627,0.11071428,1.0797627,"up","WDR59",79726,"","","","chr16:74942631-75018981 (-) // 97.57 // q23.1"]
["11759271_x_at",0.14232469,-0.21037984,0.017867327,-0.017867327,-0.07161021,0.24677896,0.8585393,0.65314215,-1.0491079,-0.06916308,1.0491079,"down","IFNA5",3442,"0006952 // defense response // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement /// 0060338 // regulation of type I interferon-mediated signaling pathway // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0005126 // cytokine receptor binding // inferred from electronic annotation /// 0005126 // cytokine receptor binding // traceable author statement","chr9:21304324-21305312 (-) // 90.59 // p21.3"]
["11754640_a_at",-0.21659756,-0.06397486,0.038874626,-0.038874626,0.21873713,0.20785618,0.42222932,0.13477659,-1.1565323,-0.20980553,1.1565323,"down","EPHX2",2053,"0006805 // xenobiotic metabolic process // non-traceable author statement /// 0006874 // cellular calcium ion homeostasis // non-traceable author statement /// 0006954 // inflammatory response // non-traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008217 // regulation of blood pressure // non-traceable author statement /// 0009636 // response to toxin // non-traceable author statement /// 0009636 // response to toxin // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0017144 // drug metabolic process // non-traceable author statement /// 0019439 // aromatic compound catabolic process // inferred from electronic annotation /// 0042632 // cholesterol homeostasis // inferred from direct assay /// 0045909 // positive regulation of vasodilation // non-traceable author statement /// 0046839 // phospholipid dephosphorylation // inferred from direct assay /// 0072593 // reactive oxygen species metabolic process // non-traceable author statement /// 0090181 // regulation of cholesterol metabolic process // inferred from mutant phenotype","0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005777 // peroxisome // inferred from electronic annotation /// 0005777 // peroxisome // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // non-traceable author statement /// 0005829 // cytosol // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay","0000287 // magnesium ion binding // inferred from direct assay /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004301 // epoxide hydrolase activity // inferred from direct assay /// 0004301 // epoxide hydrolase activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from direct assay /// 0042577 // lipid phosphatase activity // inferred from direct assay /// 0042803 // protein homodimerization activity // non-traceable author statement /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:27348667-27402439 (+) // 99.61 // p21.2"]
["11760673_x_at",0.024312973,-0.15749693,-0.34594584,0.1862998,-0.017726421,0.017726421,0.44299668,0.14826645,-1.1661956,-0.22180982,1.1661956,"down","LYRM4",57128,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","","chr6:5108785-5109468 (-) // 49.85 // p25.1"]
["11746051_a_at",0.0013885498,0.026348114,-0.0013885498,0.076005936,-0.18982697,-0.17047691,0.6150541,0.29505017,1.0744131,0.10354875,1.0744131,"up","HP1BP3",50809,"0006334 // nucleosome assembly // inferred from electronic annotation","0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr1:21101933-21113154 (-) // 45.44 // p36.12"]
["11722785_x_at",-0.050522804,-0.033352852,-0.053417206,0.033352852,0.112856865,0.05386448,0.11789991,0.0103065455,-1.0810668,-0.11245573,1.0810668,"down","GRWD1",83743,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay","","chr19:48949029-48957230 (+) // 86.15 // q13.33"]
["11741597_s_at",-0.039103985,0.009346485,0.014897823,-0.009346485,-0.060297728,0.19678402,0.8238573,0.58786666,-1.033353,-0.047333132,1.033353,"down","PIKFYVE /// SMR3A /// SMR3B","10879 /// 200576 /// 26952","0006898 // receptor-mediated endocytosis // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0034504 // protein localization to nucleus // inferred from mutant phenotype /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042147 // retrograde transport, endosome to Golgi // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // inferred from electronic annotation /// 0046488 // phosphatidylinositol metabolic process // inferred from electronic annotation /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from direct assay /// 0010008 // endosome membrane // inferred from electronic annotation /// 0012506 // vesicle membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from direct assay /// 0045121 // membrane raft // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000285 // 1-phosphatidylinositol-3-phosphate 5-kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016307 // phosphatidylinositol phosphate kinase activity // inferred from electronic annotation /// 0016308 // 1-phosphatidylinositol-4-phosphate 5-kinase activity // traceable author statement /// 0016308 // 1-phosphatidylinositol-4-phosphate 5-kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:71226477-71232836 (+) // 99.68 // q13.3"]
["11756485_a_at",0.04659033,-0.44153023,-0.5316396,0.8050184,0.14615822,-0.04659033,0.4054948,0.12401342,-1.5266705,-0.6103887,1.5266705,"down","TXLNA",200081,"0006887 // exocytosis // inferred from electronic annotation /// 0008283 // cell proliferation // non-traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005737 // cytoplasm // inferred from direct assay","0005125 // cytokine activity // non-traceable author statement /// 0030372 // high molecular weight B cell growth factor receptor binding // non-traceable author statement","chr1:32645307-32663885 (+) // 96.44 // p35.1"]
["11730279_at",-0.10006952,0.09278822,-0.007469654,-0.08400631,0.007469654,0.021589756,0.944832,0.8462446,1.0093305,0.013398671,1.0093305,"up","SPATA16",83893,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005794 // Golgi apparatus // inferred from electronic annotation","","chr3:172607146-172859058 (-) // 98.41 // q26.31"]
["11727272_x_at",0.038047314,0.12423515,-0.058677673,-0.002187252,-0.08608937,0.0021870136,0.6658406,0.3523614,1.0448034,0.06323147,1.0448034,"up","TRIM55",84675,"0007165 // signal transduction // non-traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005874 // microtubule // non-traceable author statement","0004871 // signal transducer activity // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:67039130-67087720 (+) // 94.88 // q13.1"]
["11761098_at",-0.043776512,0.23966146,0.043776274,-0.08534098,-0.19728804,0.16096878,0.71811116,0.42264846,1.0870668,0.12044056,1.0870668,"up","AKNAD1",254268,"","0005737 // cytoplasm // inferred from direct assay","","chr1:109379345-109399716 (-) // 89.68 // p13.3"]
["11735152_a_at",0.0065336227,0.26729083,0.08675265,-0.22110724,-0.0065336227,-0.17083073,0.29537556,0.06590412,1.1916959,0.25301617,1.1916959,"up","SLC8A1",6546,"0001666 // response to hypoxia // inferred from electronic annotation /// 0001892 // embryonic placenta development // inferred from electronic annotation /// 0002026 // regulation of the force of heart contraction // inferred by curator /// 0002026 // regulation of the force of heart contraction // inferred from sequence or structural similarity /// 0002026 // regulation of the force of heart contraction // inferred from electronic annotation /// 0002027 // regulation of heart rate // inferred from sequence or structural similarity /// 0002028 // regulation of sodium ion transport // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0010881 // regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion // inferred from sequence or structural similarity /// 0014829 // vascular smooth muscle contraction // inferred from sequence or structural similarity /// 0021537 // telencephalon development // inferred from electronic annotation /// 0033198 // response to ATP // inferred from electronic annotation /// 0034614 // cellular response to reactive oxygen species // inferred from direct assay /// 0035050 // embryonic heart tube development // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0044557 // relaxation of smooth muscle // inferred from sequence or structural similarity /// 0051481 // reduction of cytosolic calcium ion concentration // inferred from sequence or structural similarity /// 0051924 // regulation of calcium ion transport // inferred from electronic annotation /// 0055013 // cardiac muscle cell development // inferred from sequence or structural similarity /// 0055013 // cardiac muscle cell development // inferred from electronic annotation /// 0055074 // calcium ion homeostasis // inferred from sequence or structural similarity /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0055119 // relaxation of cardiac muscle // inferred by curator /// 0060401 // cytosolic calcium ion transport // traceable author statement /// 0060402 // calcium ion transport into cytosol // inferred from sequence or structural similarity /// 0060402 // calcium ion transport into cytosol // inferred from electronic annotation /// 0070509 // calcium ion import // inferred from direct assay /// 0071313 // cellular response to caffeine // inferred from sequence or structural similarity /// 0071320 // cellular response to cAMP // inferred from electronic annotation /// 0071436 // sodium ion export // inferred from direct assay /// 0086064 // cell communication by electrical coupling involved in cardiac conduction // inferred from sequence or structural similarity","0005624 // membrane fraction // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0014704 // intercalated disc // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0030018 // Z disc // inferred from sequence or structural similarity /// 0030315 // T-tubule // inferred from sequence or structural similarity /// 0030315 // T-tubule // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from sequence or structural similarity /// 0042383 // sarcolemma // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation","0005432 // calcium:sodium antiporter activity // inferred from direct assay /// 0005432 // calcium:sodium antiporter activity // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0008092 // cytoskeletal protein binding // inferred from direct assay /// 0015297 // antiporter activity // inferred from electronic annotation /// 0030506 // ankyrin binding // inferred from physical interaction /// 0030506 // ankyrin binding // inferred from sequence or structural similarity /// 0031072 // heat shock protein binding // inferred from electronic annotation /// 0044325 // ion channel binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:40339285-40680684 (-) // 95.12 // p22.1"]
["11750723_x_at",0.08793354,0.19456482,0.17563915,-0.08793354,-0.19404602,-0.15056896,0.06403394,0.0027403869,1.2284979,0.29689535,1.2284979,"up","MICB",4277,"0002429 // immune response-activating cell surface receptor signaling pathway // inferred from direct assay /// 0006955 // immune response // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from direct assay /// 0009408 // response to heat // inferred from direct assay /// 0019835 // cytolysis // inferred from electronic annotation /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0046629 // gamma-delta T cell activation // inferred from direct assay /// 0050689 // negative regulation of defense response to virus by host // inferred from direct assay /// 0050776 // regulation of immune response // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042612 // MHC class I protein complex // inferred from electronic annotation","0046703 // natural killer cell lectin-like receptor binding // inferred from direct assay","chr6:31465862-31478898 (+) // 65.23 // p21.33"]
["11748501_a_at",-0.3829031,-0.031454086,-0.10744858,0.06890869,0.031454086,0.08143473,0.3546253,0.09523443,-1.176527,-0.23453446,1.176527,"down","C3orf32",51066,"","","","chr3:8661094-8693764 (-) // 83.8 // p26.1"]
["11718767_x_at",-0.2257595,-0.22947216,-0.20983791,0.28037834,0.20983887,0.23009491,0.01322393,2.9448978e-5,-1.3772533,-0.4617939,1.3772533,"down","PRSS23",11098,"0006508 // proteolysis // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr11:86511281-86522275 (+) // 91.21 // q14.2"]
["11739879_a_at",-0.27086878,0.010712147,0.083690405,-0.0055077076,-0.117904425,0.005507946,0.95521975,0.87351817,-1.0136226,-0.019520655,1.0136226,"down","TNIK",23043,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006950 // response to stress // inferred from direct assay /// 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0007243 // intracellular protein kinase cascade // inferred from direct assay /// 0007256 // activation of JNKK activity // inferred from direct assay /// 0007256 // activation of JNKK activity // inferred from mutant phenotype /// 0007399 // nervous system development // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0031532 // actin cytoskeleton reorganization // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048814 // regulation of dendrite morphogenesis // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0055037 // recycling endosome // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005083 // small GTPase regulator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr3:170779846-171178118 (-) // 97.99 // q26.2"]
["11752519_x_at",0.14745808,0.100693226,-0.42763472,-0.06234932,-0.013957024,0.013957024,0.94395226,0.84377664,-1.0274333,-0.039044704,1.0274333,"down","EHD2",30846,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0006412 // translation // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0030866 // cortical actin cytoskeleton organization // inferred from electronic annotation /// 0032456 // endocytic recycling // inferred from genetic interaction","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005768 // endosome // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0010008 // endosome membrane // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019843 // rRNA binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation","chr19:48216678-48244834 (+) // 99.69 // q13.33"]
["11748084_a_at",-0.14108562,0.37344122,0.03549385,-0.0028219223,-0.18350267,0.0028219223,0.70811474,0.4079165,1.1099162,0.15045077,1.1099162,"up","MFGE8",4240,"0001525 // angiogenesis // inferred from electronic annotation /// 0006910 // phagocytosis, recognition // inferred from electronic annotation /// 0006911 // phagocytosis, engulfment // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007338 // single fertilization // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0050766 // positive regulation of phagocytosis // inferred from electronic annotation /// 2000427 // positive regulation of apoptotic cell clearance // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019897 // extrinsic to plasma membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay","0001786 // phosphatidylserine binding // inferred from electronic annotation /// 0005178 // integrin binding // inferred from electronic annotation /// 0008429 // phosphatidylethanolamine binding // inferred from electronic annotation","chr15:89442545-89456614 (-) // 99.66 // q26.1"]
["11744401_a_at",0.2547884,0.013372421,0.006829262,-0.006829262,-0.123345375,-0.28098106,0.3900489,0.114985734,1.171791,0.22871523,1.171791,"up","CAMTA1",23261,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr1:6845516-6932098 (+) // 66.22 // p36.31"]
["11733180_a_at",0.15225697,-0.06901598,-0.11567402,0.06901646,0.095006466,-0.1843996,0.99148506,0.9752062,-1.0027895,-0.0040187915,1.0027895,"down","ETV1",2115,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0048935 // peripheral nervous system neuron development // traceable author statement","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr7:13930852-14029291 (-) // 92.33 // p21.2"]
["11724074_a_at",-0.048707485,0.0007543564,0.028552055,-0.09330797,-0.0007543564,0.08120012,0.9899016,0.970416,-1.0015119,-0.0021796087,1.0015119,"down","SMARCAD1",56916,"0000018 // regulation of DNA recombination // inferred from expression pattern /// 0006338 // chromatin remodeling // non-traceable author statement /// 0009117 // nucleotide metabolic process // non-traceable author statement /// 0016568 // chromatin modification // non-traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement /// 0051260 // protein homooligomerization // non-traceable author statement /// 0051304 // chromosome separation // inferred from mutant phenotype /// 0070932 // histone H3 deacetylation // inferred from mutant phenotype /// 0070933 // histone H4 deacetylation // inferred from mutant phenotype","0000792 // heterochromatin // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016363 // nuclear matrix // non-traceable author statement /// 0043596 // nuclear replication fork // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // non-traceable author statement /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr4:95129015-95212441 (+) // 95.82 // q22.3"]
["11720003_at",0.10586262,-0.01642704,0.029931068,-0.07296276,-0.17190552,0.01642704,0.44434285,0.14919251,1.0836779,0.115935996,1.0836779,"up","NRARP",441478,"0001569 // patterning of blood vessels // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // inferred from electronic annotation /// 0002040 // sprouting angiogenesis // inferred from electronic annotation /// 0002043 // blood vessel endothelial cell proliferation involved in sprouting angiogenesis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0022407 // regulation of cell-cell adhesion // inferred from electronic annotation /// 0045581 // negative regulation of T cell differentiation // inferred from electronic annotation /// 0045746 // negative regulation of Notch signaling pathway // inferred from mutant phenotype /// 0045746 // negative regulation of Notch signaling pathway // inferred from electronic annotation /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from mutant phenotype","","","chr9:140194093-140196723 (-) // 81.17 // q34.3"]
["11716459_at",0.20820904,0.08406639,0.052645683,-0.10993481,-0.052645683,-0.093123436,0.14812218,0.01655298,1.1488643,0.20020837,1.1488643,"up","TUBA4A",7277,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0000278 // mitotic cell cycle // traceable author statement /// 0002576 // platelet degranulation // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0007017 // microtubule-based process // inferred from electronic annotation /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0051258 // protein polymerization // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr2:220114432-220119747 (-) // 93.59 // q35"]
["11748589_a_at",0.04301405,-0.05142784,0.07973647,-0.04301405,-0.108938694,0.11412954,0.8623444,0.6605458,1.0255387,0.03638191,1.0255387,"up","EFCAB6",64800,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr22:43936054-44208117 (-) // 99.88 // q13.2"]
["11723889_a_at",0.023814201,0.026648045,-0.023814678,0.105782986,-0.02823162,-0.10765314,0.9182678,0.7835625,1.0131983,0.018916499,1.0131983,"up","HELQ",113510,"","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr4:84328498-84377036 (-) // 98.71 // q21.23"]
["11731163_at",0.0031032562,-0.009775162,-0.003103733,-0.10329962,0.09675026,0.17882681,0.7776244,0.5093668,-1.0429604,-0.060684387,1.0429604,"down","VIPR2",7434,"0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007190 // activation of adenylate cyclase activity // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004999 // vasoactive intestinal polypeptide receptor activity // inferred from electronic annotation","chr7:158820865-158937625 (-) // 90.98 // q36.3"]
["11760460_at",-0.0057406425,-0.092285395,0.0057406425,-0.103155136,0.04410553,0.13219023,0.7746195,0.50458664,-1.0389614,-0.05514207,1.0389614,"down","RBM48",84060,"","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr7:92158108-92167318 (+) // 79.67 // q21.2"]
["11742173_x_at",-0.35247374,0.13882828,-0.18881273,0.032963753,-0.032963753,0.22391462,0.5907858,0.27116704,-1.1557192,-0.20879087,1.1557192,"down","LST1",7940,"0000902 // cell morphogenesis // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // non-traceable author statement /// 0016358 // dendrite development // inferred from direct assay /// 0050672 // negative regulation of lymphocyte proliferation // inferred from direct assay","0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // non-traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:31553970-31556685 (+) // 76.27 // p21.33"]
["11755342_x_at",0.01889515,-0.05792904,-0.048921585,0.17155647,0.044792175,-0.01889515,0.5038168,0.1938667,-1.0681664,-0.095136374,1.0681664,"down","MIR1292 /// NOP56 /// SNORD110 /// SNORD57 /// SNORD86","100302138 /// 10528 /// 26792 /// 692201 /// 692213","0006364 // rRNA processing // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // traceable author statement /// 0005730 // nucleolus // inferred from electronic annotation /// 0005732 // small nucleolar ribonucleoprotein complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0031428 // box C/D snoRNP complex // non-traceable author statement /// 0070761 // pre-snoRNP complex // inferred from direct assay","0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0030515 // snoRNA binding // inferred from direct assay","chr20:2633673-2639038 (+) // 94.05 // p13"]
["11759836_at",0.0190382,-0.12420893,-0.0190382,0.13719606,0.0643549,-0.18909454,0.87873083,0.69422936,-1.0320802,-0.045555044,1.0320802,"down","RHOBTB1",9886,"0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr10:62669074-62761198 (-) // 91.27 // q21.2"]
["11763682_at",-0.12826157,0.008012295,-0.008012772,-0.31134033,0.02108574,0.1251235,0.976853,0.9335428,1.0085549,0.012289668,1.0085549,"up","ABCB9",23457,"0001916 // positive regulation of T cell mediated cytotoxicity // not recorded /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // inferred from direct assay /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0015833 // peptide transport // inferred from direct assay /// 0015833 // peptide transport // inferred from electronic annotation /// 0055085 // transmembrane transport // not recorded /// 0055085 // transmembrane transport // inferred from electronic annotation","0005743 // mitochondrial inner membrane // not recorded /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005886 // plasma membrane // not recorded /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // inferred from direct assay /// 0042825 // TAP complex // not recorded","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0015421 // oligopeptide-transporting ATPase activity // not recorded /// 0015440 // peptide-transporting ATPase activity // inferred from direct assay /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0022891 // substrate-specific transmembrane transporter activity // inferred from direct assay /// 0042288 // MHC class I protein binding // not recorded /// 0042605 // peptide antigen binding // not recorded /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046978 // TAP1 binding // not recorded /// 0046979 // TAP2 binding // not recorded /// 0046980 // tapasin binding // not recorded","chr12:123465701-123466268 (-) // 69.12 // q24.31"]
["11739838_a_at",0.02825737,-0.02825737,0.055768013,-0.22451735,-0.072375774,0.103009224,0.7331229,0.44279763,1.0593779,0.08321733,1.0593779,"up","KDM5A",5927,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0019907 // cyclin-dependent protein kinase activating kinase holoenzyme complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:389222-498620 (-) // 97.02 // p13.33"]
["11749221_a_at",-0.053345203,0.061796665,-0.11880994,0.053345203,-0.10709715,0.13137388,0.78133744,0.5150068,-1.0443897,-0.062660165,1.0443897,"down","SLC13A3",64849,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006835 // dicarboxylic acid transport // inferred from electronic annotation /// 0015744 // succinate transport // inferred from electronic annotation /// 0015746 // citrate transport // inferred from electronic annotation /// 0015810 // aspartate transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0071422 // succinate transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005626 // insoluble fraction // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0005310 // dicarboxylic acid transmembrane transporter activity // inferred from electronic annotation /// 0005343 // organic acid:sodium symporter activity // inferred from electronic annotation /// 0015137 // citrate transmembrane transporter activity // inferred from electronic annotation /// 0015141 // succinate transmembrane transporter activity // inferred from electronic annotation /// 0015183 // L-aspartate transmembrane transporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation /// 0015362 // high affinity sodium:dicarboxylate symporter activity // inferred from electronic annotation /// 0017153 // sodium:dicarboxylate symporter activity // inferred from electronic annotation","chr20:45187727-45217577 (-) // 99.76 // q13.12"]
["11752879_x_at",0.0801301,0.14427423,-0.1418395,0.01386261,-0.16951656,-0.01386261,0.7469103,0.4635518,1.0599728,0.08402719,1.0599728,"up","SMTN",6525,"0006939 // smooth muscle contraction // traceable author statement /// 0007517 // muscle organ development // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement","0003779 // actin binding // traceable author statement /// 0008307 // structural constituent of muscle // traceable author statement","chr22:31489353-31495776 (+) // 99.73 // q12.2"]
["11752272_a_at",0.087477684,0.045002937,-0.06756306,0.07658768,-0.11871815,-0.045002937,0.788701,0.52764684,1.0357556,0.050683666,1.0357556,"up","MAN1B1",11253,"0006457 // protein folding // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006487 // protein N-linked glycosylation // non-traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009311 // oligosaccharide metabolic process // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0030433 // ER-associated protein catabolic process // inferred from mutant phenotype /// 0030433 // ER-associated protein catabolic process // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005624 // membrane fraction // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0044322 // endoplasmic reticulum quality control compartment // traceable author statement","0004571 // mannosyl-oligosaccharide 1,2-alpha-mannosidase activity // inferred from direct assay /// 0004571 // mannosyl-oligosaccharide 1,2-alpha-mannosidase activity // traceable author statement /// 0004571 // mannosyl-oligosaccharide 1,2-alpha-mannosidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation","chr9:139981532-140003349 (+) // 99.83 // q34.3"]
["11729722_a_at",0.11957455,0.07877064,0.14561558,-0.07877064,-0.12300444,-0.17196655,0.055015642,0.0019680664,1.1803659,0.23923416,1.1803659,"up","PIAS2",9063,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0016925 // protein sumoylation // inferred from electronic annotation /// 0030521 // androgen receptor signaling pathway // non-traceable author statement /// 0045667 // regulation of osteoblast differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0060766 // negative regulation of androgen receptor signaling pathway // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0016604 // nuclear body // inferred from electronic annotation /// 0016605 // PML body // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0016874 // ligase activity // inferred from electronic annotation /// 0019789 // SUMO ligase activity // inferred from direct assay /// 0031625 // ubiquitin protein ligase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050681 // androgen receptor binding // non-traceable author statement","chr18:44390917-44497495 (-) // 95.99 // q21.1"]
["11716596_a_at",-0.1861782,-0.006324768,-0.018686295,0.006324768,0.0470829,0.072678566,0.42998883,0.13976158,-1.081044,-0.112425186,1.081044,"down","SLC44A1",23446,"0006810 // transport // inferred from electronic annotation /// 0015871 // choline transport // traceable author statement /// 0015871 // choline transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0015220 // choline transmembrane transporter activity // traceable author statement /// 0015220 // choline transmembrane transporter activity // inferred from electronic annotation","chr9:108006905-108154490 (+) // 96.11 // q31.1"]
["11724916_at",0.6199541,0.5316572,0.5185709,-0.5727329,-0.5185709,-0.5404515,0.008716948,6.457724e-6,2.1445067,1.1006458,2.1445067,"up","TMTC3",160418,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:88536072-88593664 (+) // 91.71 // q21.32"]
["11730024_a_at",0.09572935,0.00616765,-0.1095922,-0.1374867,-0.00616765,0.09645915,0.9615747,0.8908704,1.0091683,0.013166747,1.0091683,"up","TIMD4",91937,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr5:156346292-156390266 (-) // 97.16 // q33.3"]
["11748263_a_at",0.043959618,-0.0094258785,-0.08158016,0.033682585,0.0094258785,-0.05376649,0.9249024,0.7997638,-1.008443,-0.012129538,1.008443,"down","DCAF17",80067,"0016567 // protein ubiquitination // inferred by curator /// 0016567 // protein ubiquitination // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0080008 // CUL4-RING ubiquitin ligase complex // inferred from direct assay","","chr2:172290980-172337955 (+) // 97.2 // q31.1"]
["11725065_a_at",0.3235631,-0.013730526,-0.03481102,0.2742839,-0.027989864,0.013730526,0.99148506,0.9749688,1.003471,0.004998948,1.003471,"up","TCOF1",6949,"0001501 // skeletal system development // traceable author statement /// 0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005730 // nucleolus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay","0005215 // transporter activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr5:149737201-149779869 (+) // 98.32 // q32"]
["11721667_a_at",0.24567986,0.14591599,0.10738373,-0.15895128,-0.19500303,-0.10738373,0.06388415,0.0027135925,1.2484221,0.32010585,1.2484221,"up","CDT1",81620,"0000076 // DNA replication checkpoint // inferred from direct assay /// 0000076 // DNA replication checkpoint // inferred from electronic annotation /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000083 // regulation of transcription involved in G1/S phase of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007090 // regulation of S phase of mitotic cell cycle // inferred from electronic annotation /// 0030174 // regulation of DNA-dependent DNA replication initiation // inferred from direct assay /// 0030174 // regulation of DNA-dependent DNA replication initiation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement","0003677 // DNA binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr16:88870184-88875668 (+) // 75.44 // q24.3"]
["11746525_a_at",0.13026047,-0.09080601,-0.13744879,0.057600975,0.07234669,-0.057600975,0.81430465,0.5714063,-1.0401419,-0.056780413,1.0401419,"down","RBM48",84060,"","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr7:92158108-92167318 (+) // 79.67 // q21.2"]
["11757212_at",0.09687853,-0.055228233,-0.2580676,-0.015586853,0.19049358,0.015586853,0.64290994,0.32566488,-1.0985777,-0.13563696,1.0985777,"down","FLJ36777",730971,"","","","chr4:7099150-7105103 (-) // 32.24 // p16.1"]
["11756058_a_at",-0.29329205,0.06786871,0.13336754,-0.26305866,0.08703756,-0.06786919,0.91556585,0.7768269,1.0357038,0.050611436,1.0357038,"up","CEACAM1",634,"0001525 // angiogenesis // non-traceable author statement /// 0007156 // homophilic cell adhesion // non-traceable author statement /// 0007229 // integrin-mediated signaling pathway // non-traceable author statement /// 0016477 // cell migration // non-traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr19:43015040-43025500 (-) // 67.97 // q13.2"]
["11740811_at",-0.065867424,0.06146097,-0.02892065,-0.07527399,0.02892065,0.10700226,0.8595531,0.6547794,-1.0219505,-0.031325296,1.0219505,"down","TPSG1",25823,"0006508 // proteolysis // inferred from electronic annotation","0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // traceable author statement /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr16:1271653-1274775 (-) // 97.96 // p13.3"]
["11756144_s_at",0.19967079,-0.09153175,-0.14609241,0.27267456,0.0013122559,-0.0013122559,0.77343863,0.5024415,-1.0744085,-0.10354266,1.0744085,"down","EIF4B /// LOC100653227","100653227 /// 1975","0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006413 // translational initiation // inferred from electronic annotation /// 0006446 // regulation of translational initiation // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005829 // cytosol // traceable author statement /// 0016281 // eukaryotic translation initiation factor 4F complex // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0003743 // translation initiation factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr12:53434571-53435983 (+) // 92.76 // q13.13 /// chr7:104310589-104312009 (+) // 90.53 // q22.2"]
["11721232_s_at",-0.12168503,-0.15270996,-0.06358099,0.31043863,0.27651215,0.06358099,0.14356138,0.015598621,-1.25658,-0.32950252,1.25658,"down","METTL21D",79609,"0032259 // methylation // inferred from electronic annotation","","0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr14:50575354-50583318 (-) // 98.2 // q21.3"]
["11761999_s_at",-0.024115086,0.27350187,-0.10721016,-0.12518406,0.024115086,0.1406436,0.9329902,0.8175446,1.0239893,0.03420067,1.0239893,"up","HDAC4",9759,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001501 // skeletal system development // inferred from electronic annotation /// 0002076 // osteoblast development // inferred from electronic annotation /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0010832 // negative regulation of myotube differentiation // inferred from mutant phenotype /// 0010882 // regulation of cardiac muscle contraction by calcium ion signaling // inferred from electronic annotation /// 0014894 // response to denervation involved in regulation of muscle adaptation // inferred from sequence or structural similarity /// 0014894 // response to denervation involved in regulation of muscle adaptation // inferred from electronic annotation /// 0014898 // cardiac muscle hypertrophy in response to stress // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016575 // histone deacetylation // inferred from direct assay /// 0016575 // histone deacetylation // inferred from mutant phenotype /// 0016575 // histone deacetylation // inferred from electronic annotation /// 0030183 // B cell differentiation // traceable author statement /// 0033235 // positive regulation of protein sumoylation // inferred from direct assay /// 0034983 // peptidyl-lysine deacetylation // inferred from direct assay /// 0042113 // B cell activation // traceable author statement /// 0043393 // regulation of protein binding // inferred from mutant phenotype /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0045668 // negative regulation of osteoblast differentiation // inferred from electronic annotation /// 0045820 // negative regulation of glycolysis // inferred from sequence or structural similarity /// 0045820 // negative regulation of glycolysis // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0070555 // response to interleukin-1 // inferred from mutant phenotype /// 0070932 // histone H3 deacetylation // inferred from direct assay /// 0070933 // histone H4 deacetylation // inferred from direct assay","0000118 // histone deacetylase complex // inferred from direct assay /// 0000118 // histone deacetylase complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from direct assay /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0042641 // actomyosin // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0004407 // histone deacetylase activity // inferred from direct assay /// 0004407 // histone deacetylase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0030955 // potassium ion binding // inferred from direct assay /// 0031078 // histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0032041 // NAD-dependent histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0032129 // histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0033558 // protein deacetylase activity // inferred from direct assay /// 0033558 // protein deacetylase activity // inferred from electronic annotation /// 0033613 // activating transcription factor binding // inferred from physical interaction /// 0034739 // histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046969 // NAD-dependent histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0046970 // NAD-dependent histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation /// 0070491 // repressing transcription factor binding // inferred from physical interaction","chr2:240016194-240112752 (-) // 93.12 // q37.3"]
["11740171_s_at",-0.1631751,-0.24952888,-0.22288847,0.46257114,0.32534027,0.16317463,0.07742926,0.0042261216,-1.4428215,-0.5288928,1.4428215,"down","PBRM1",55193,"0001890 // placenta development // inferred from electronic annotation /// 0006338 // chromatin remodeling // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007067 // mitosis // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0016568 // chromatin modification // inferred from electronic annotation","0000228 // nuclear chromosome // non-traceable author statement /// 0000776 // kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // non-traceable author statement /// 0003682 // chromatin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr3:52579367-52718931 (-) // 96.62 // p21.1"]
["11730621_x_at",0.25227642,0.001707077,-0.001707077,0.06425476,-0.22701931,-0.3132534,0.46227735,0.16212973,1.183258,0.24276474,1.183258,"up","SCYL1",57410,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // inferred from direct assay /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005801 // cis-Golgi network // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030126 // COPI vesicle coat // inferred from direct assay /// 0030126 // COPI vesicle coat // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr11:65292547-65306182 (+) // 97.49 // q13.1"]
["11729075_s_at",-0.1709671,-0.013660908,0.013660908,-0.2598176,0.09218931,0.12742615,0.9112868,0.7652263,-1.0306742,-0.04358839,1.0306742,"down","LTC4S /// MAML1","4056 /// 9794","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006691 // leukotriene metabolic process // inferred from direct assay /// 0006691 // leukotriene metabolic process // inferred from electronic annotation /// 0006692 // prostanoid metabolic process // traceable author statement /// 0006750 // glutathione biosynthetic process // not recorded /// 0007219 // Notch signaling pathway // inferred from direct assay /// 0007219 // Notch signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0010035 // response to inorganic substance // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010831 // positive regulation of myotube differentiation // inferred from genetic interaction /// 0010831 // positive regulation of myotube differentiation // inferred from electronic annotation /// 0019370 // leukotriene biosynthetic process // traceable author statement /// 0019370 // leukotriene biosynthetic process // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045445 // myoblast differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048678 // response to axon injury // inferred from electronic annotation /// 0051149 // positive regulation of muscle cell differentiation // inferred from electronic annotation /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation /// 0071299 // cellular response to vitamin A // inferred from electronic annotation","0002193 // MAML1-RBP-Jkappa- ICN1 complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // traceable author statement /// 0005640 // nuclear outer membrane // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005792 // microsome // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0004364 // glutathione transferase activity // not recorded /// 0004464 // leukotriene-C4 synthase activity // inferred from direct assay /// 0004464 // leukotriene-C4 synthase activity // traceable author statement /// 0004464 // leukotriene-C4 synthase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008047 // enzyme activator activity // inferred from electronic annotation /// 0008289 // lipid binding // inferred from direct assay /// 0008289 // lipid binding // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0042605 // peptide antigen binding // inferred from physical interaction /// 0043295 // glutathione binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr5:179220986-179223513 (+) // 91.23 // q35.3"]
["11715959_a_at",0.4354334,0.029242516,-0.029242516,0.2144661,-0.052772522,-0.038996696,0.8152276,0.57288563,1.0749321,0.10424553,1.0749321,"up","SREBF1",6720,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0003062 // regulation of heart rate by chemical signal // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006629 // lipid metabolic process // traceable author statement /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from sequence or structural similarity /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0009267 // cellular response to starvation // inferred from sequence or structural similarity /// 0009267 // cellular response to starvation // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0010867 // positive regulation of triglyceride biosynthetic process // inferred from sequence or structural similarity /// 0010867 // positive regulation of triglyceride biosynthetic process // inferred from electronic annotation /// 0019217 // regulation of fatty acid metabolic process // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0031065 // positive regulation of histone deacetylation // inferred from electronic annotation /// 0032094 // response to food // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from electronic annotation /// 0032570 // response to progesterone stimulus // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0033762 // response to glucagon stimulus // inferred from electronic annotation /// 0033993 // response to lipid // inferred from electronic annotation /// 0035104 // positive regulation of transcription via sterol regulatory element binding // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0045542 // positive regulation of cholesterol biosynthetic process // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046676 // negative regulation of insulin secretion // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation /// 0070542 // response to fatty acid // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005635 // nuclear envelope // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0012507 // ER to Golgi transport vesicle membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0044444 // cytoplasmic part // inferred from sequence or structural similarity /// 0044444 // cytoplasmic part // inferred from electronic annotation","0003677 // DNA binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0032810 // sterol response element binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr17:17714662-17740325 (-) // 99.28 // p11.2"]
["11724500_at",-0.31539774,0.14666128,0.08045292,-0.3170843,-0.08045292,0.27935696,0.988795,0.9668771,1.0069315,0.009965604,1.0069315,"up","CRYBB1",1414,"0007601 // visual perception // traceable author statement","","0005212 // structural constituent of eye lens // inferred from electronic annotation","chr22:26995244-27014042 (-) // 93.8 // q12.1"]
["11731104_a_at",0.014084816,0.013370991,-0.003127098,-0.22047997,-0.19205141,0.003127098,0.3807905,0.109607846,1.105407,0.14457765,1.105407,"up","ATF7",11016,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0034399 // nuclear periphery // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation /// 0051019 // mitogen-activated protein kinase binding // inferred from direct assay","chr12:53905077-54020199 (-) // 94.86 // q13.13"]
["11738473_s_at",0.040281057,-0.008475304,0.11548877,-0.15905094,-0.085385084,0.008475304,0.36768067,0.1019684,1.0925897,0.12775177,1.0925897,"up","SLCO1B3 /// SLCO1B7","28234 /// 338821","0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0008206 // bile acid metabolic process // traceable author statement /// 0015711 // organic anion transport // traceable author statement /// 0015721 // bile acid and bile salt transport // traceable author statement /// 0043252 // sodium-independent organic anion transport // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0008514 // organic anion transmembrane transporter activity // traceable author statement","chr12:20968672-21243040 (+) // 99.95 // p12.2"]
["11754001_a_at",0.14054513,0.016996145,0.08030057,-0.081121445,-0.4098215,-0.016996145,0.40107667,0.121463835,1.1880485,0.2485937,1.1880485,"up","SUN3",256979,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0034993 // SUN-KASH complex // inferred from electronic annotation","","chr7:48026874-48048660 (-) // 75.73 // p12.3"]
["11727996_a_at",0.17338061,-0.21968865,0.1500678,-0.26288295,0.030204535,-0.030204535,0.7549887,0.47594523,1.088404,0.12221424,1.088404,"up","MYEF2",50804,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007518 // myoblast cell fate determination // traceable author statement /// 0014902 // myotube differentiation // inferred from expression pattern /// 0030182 // neuron differentiation // inferred from expression pattern","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003713 // transcription coactivator activity // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation","chr15:48431624-48470714 (-) // 89.47 // q21.1"]
["11758912_at",-0.14933515,0.040285826,0.20146155,-0.04739356,-0.040285587,0.15210271,0.9798619,0.9420588,1.0064877,0.009329581,1.0064877,"up","CLEC1A",51267,"0006952 // defense response // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement","0005622 // intracellular // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004888 // transmembrane signaling receptor activity // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr12:10222153-10251664 (-) // 92.63 // p13.2"]
["11754563_a_at",-0.003909588,-0.0520041,0.0039093494,-0.08500695,0.050786495,0.23767757,0.71761096,0.421443,-1.0608008,-0.08515376,1.0608008,"down","CCBE1",147372,"0001525 // angiogenesis // inferred from electronic annotation /// 0001946 // lymphangiogenesis // inferred from mutant phenotype /// 0001946 // lymphangiogenesis // inferred from sequence or structural similarity /// 0002040 // sprouting angiogenesis // inferred from sequence or structural similarity /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0048845 // venous blood vessel morphogenesis // inferred from sequence or structural similarity","0005576 // extracellular region // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr18:57101163-57122178 (-) // 85.81 // q21.32"]
["11750405_a_at",-0.10202503,0.40404224,0.12049818,-0.3506236,0.04593849,-0.04593849,0.56401324,0.24488571,1.1955819,0.25771296,1.1955819,"up","LRIG1",26018,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:66430648-66454834 (-) // 100.0 // p14.1"]
["11728677_a_at",0.057243824,-0.051849365,-0.15681553,0.22596073,0.041422844,-0.041422367,0.5981079,0.27814832,-1.0911081,-0.12579402,1.0911081,"down","CES2",8824,"0009056 // catabolic process // traceable author statement","0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation","0004091 // carboxylesterase activity // not recorded /// 0004091 // carboxylesterase activity // inferred from electronic annotation /// 0004091 // carboxylesterase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0047374 // methylumbelliferyl-acetate deacetylase activity // inferred from electronic annotation /// 0050253 // retinyl-palmitate esterase activity // inferred from electronic annotation /// 0080030 // methyl indole-3-acetate esterase activity // inferred from electronic annotation /// 0080031 // methyl salicylate esterase activity // inferred from electronic annotation /// 0080032 // methyl jasmonate esterase activity // inferred from electronic annotation","chr16:66968127-66978999 (+) // 86.1 // q22.1"]
["11741438_a_at",-0.20925641,-0.014129162,-0.20702124,0.014128923,0.045644283,0.03387475,0.2707301,0.05556521,-1.1287179,-0.17468496,1.1287179,"down","CLGN",1047,"0006457 // protein folding // inferred from electronic annotation /// 0006461 // protein complex assembly // inferred from electronic annotation /// 0007338 // single fertilization // traceable author statement /// 0007339 // binding of sperm to zona pellucida // inferred from electronic annotation","0005635 // nuclear envelope // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // traceable author statement","chr4:141309608-141348815 (-) // 98.8 // q31.1"]
["11752073_a_at",-0.07314706,0.48259115,0.25956297,0.07059145,-0.07059121,-0.1915772,0.4897333,0.18303405,1.2199832,0.2868613,1.2199832,"up","C20orf194",25943,"","","","chr20:3233025-3321608 (-) // 96.08 // p13"]
["11762924_at",0.09465432,0.03625393,0.10990143,-0.03625393,-0.067913055,-0.14007807,0.13205785,0.013162374,1.1185927,0.16168487,1.1185927,"up","GUSBP1 /// GUSBP4","375513 /// 728411","0005975 // carbohydrate metabolic process // inferred from electronic annotation","","0003824 // catalytic activity // inferred from electronic annotation /// 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds // inferred from electronic annotation /// 0043169 // cation binding // inferred from electronic annotation","chr5:21459782-21544886 (+) // 78.56 // p14.3"]
["11736663_s_at",0.09744024,-0.05854702,-0.072889805,0.30211544,0.05854702,-0.12809801,0.8016655,0.5491153,-1.0635248,-0.08885373,1.0635248,"down","ZNF354B",117608,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:178286953-178312411 (+) // 94.98 // q35.3"]
["11730441_a_at",-0.07135296,-0.022213936,-0.064807415,0.06510067,0.12602043,0.022213936,0.16855095,0.021528251,-1.0896789,-0.12390305,1.0896789,"down","FAM155A",728215,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr13:107820882-108519460 (-) // 91.07 // q33.3"]
["11736496_a_at",0.28519154,0.031424522,-0.031424522,0.04865265,-0.2954502,-0.255558,0.4388533,0.14554875,1.1995686,0.2625157,1.1995686,"up","TNRC6B",23112,"0006417 // regulation of translation // inferred from electronic annotation /// 0007219 // Notch signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031047 // gene silencing by RNA // inferred from electronic annotation","0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr22:40573928-40731809 (+) // 95.57 // q13.1"]
["11761536_a_at",-0.1503632,-0.16871762,0.08711386,0.031624794,-0.031624556,0.06594014,0.63625455,0.31837845,-1.0712553,-0.099302374,1.0712553,"down","TM2D3",80213,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr15:102173275-102192579 (-) // 53.12 // q26.3"]
["11717140_a_at",0.24816513,0.05811882,0.02020073,-0.02020073,-0.12100983,-0.09801197,0.3038422,0.07013044,1.1396328,0.18856907,1.1396328,"up","COG4",25839,"0006810 // transport // inferred from electronic annotation /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // inferred from mutant phenotype /// 0007030 // Golgi organization // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0048213 // Golgi vesicle prefusion complex stabilization // inferred from mutant phenotype","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0017119 // Golgi transport complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr16:70514471-70557469 (-) // 96.28 // q22.1"]
["11746053_x_at",0.45777607,0.013577461,0.09090471,-0.26374245,-0.013577461,-0.2368226,0.3376605,0.086045116,1.282359,0.3588002,1.282359,"up","LOC100132999 /// LOC642441 /// LOC730256","100132999 /// 642441 /// 730256","","","","chr1:147930935-147932645 (+) // 93.82 // q21.2 /// chr1:144339737-144341456 (+) // 93.42 // q21.1 /// chr1:143743412-143745117 (+) // 93.36 // q21.1 /// chr1:144519986-144521705 (+) // 94.46 // q21.1 /// chr1:149575781-149577488 (-) // 93.24 // q21.2"]
["11716894_x_at",0.19775009,0.019064903,-0.06396866,0.012574196,-0.012574196,-0.1513586,0.6509163,0.33464873,1.0728153,0.10140172,1.0728153,"up","TOX4",9878,"","0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0072357 // PTW/PP1 phosphatase complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr14:21945334-21967321 (+) // 85.86 // q11.2"]
["11743006_x_at",-0.6313143,-0.35325336,-0.14200115,0.2760315,0.41521072,0.14200115,0.14423701,0.015753794,-1.5727297,-0.6532707,1.5727297,"down","RECQL",5965,"0000733 // DNA strand renaturation // inferred from direct assay /// 0006260 // DNA replication // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006310 // DNA recombination // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // inferred from direct assay /// 0032508 // DNA duplex unwinding // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0000739 // DNA strand annealing activity // inferred from direct assay /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003678 // DNA helicase activity // inferred from direct assay /// 0003678 // DNA helicase activity // traceable author statement /// 0004003 // ATP-dependent DNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0043140 // ATP-dependent 3'-5' DNA helicase activity // inferred from electronic annotation","chr12:21621843-21654603 (-) // 86.96 // p12.1"]
["11728736_at",-0.15570498,-0.10905409,0.26307726,-0.04233408,0.04233408,0.35025883,0.7999359,0.54647833,-1.0847131,-0.11731351,1.0847131,"down","ZBTB38",253461,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:141043054-141168630 (+) // 92.23 // q23"]
["11729670_a_at",-0.18492413,-0.09566927,-0.08106995,0.3297491,0.08106995,0.24031544,0.13258746,0.0132731665,-1.2636521,-0.3375993,1.2636521,"down","BDH1",622,"0001889 // liver development // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0008152 // metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009636 // response to toxin // inferred from electronic annotation /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042594 // response to starvation // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045471 // response to ethanol // inferred from electronic annotation /// 0046686 // response to cadmium ion // inferred from electronic annotation /// 0046950 // cellular ketone body metabolic process // traceable author statement /// 0046951 // ketone body biosynthetic process // traceable author statement /// 0046952 // ketone body catabolic process // traceable author statement /// 0051412 // response to corticosterone stimulus // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060416 // response to growth hormone stimulus // inferred from electronic annotation /// 0060612 // adipose tissue development // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005759 // mitochondrial matrix // non-traceable author statement /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003858 // 3-hydroxybutyrate dehydrogenase activity // inferred from direct assay /// 0003858 // 3-hydroxybutyrate dehydrogenase activity // traceable author statement /// 0003858 // 3-hydroxybutyrate dehydrogenase activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation","chr3:197236653-197282858 (-) // 83.31 // q29"]
["11755969_a_at",0.020386696,-0.0055379868,-0.17221928,0.0055379868,-0.09075165,0.053180695,0.8313085,0.6011625,-1.0293826,-0.041779283,1.0293826,"down","NUCB1",4924,"","0005615 // extracellular space // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation","chr19:49403568-49426522 (+) // 91.33 // q13.33"]
["11757132_at",0.07957077,0.112173796,-0.22639585,0.08684492,-0.07957101,-0.080385685,0.9721578,0.92093486,1.0089259,0.012820241,1.0089259,"up","SNORA29 /// TCP1","677812 /// 6950","0006457 // protein folding // traceable author statement /// 0006457 // protein folding // inferred from electronic annotation /// 0007021 // tubulin complex assembly // non-traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044267 // cellular protein metabolic process // inferred from electronic annotation /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement","0000242 // pericentriolar material // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005720 // nuclear heterochromatin // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005832 // chaperonin-containing T-complex // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0030054 // cell junction // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // traceable author statement","chr6:160206625-160206765 (-) // 100.0 // q25.3"]
["11735068_a_at",-0.22389221,0.098174095,-0.008880138,-0.10453272,0.008880138,0.04022169,0.93095237,0.81291765,-1.0184599,-0.0263892,1.0184599,"down","CES3",23491,"","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation","0004091 // carboxylesterase activity // not recorded /// 0004091 // carboxylesterase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0050253 // retinyl-palmitate esterase activity // inferred from electronic annotation /// 0080030 // methyl indole-3-acetate esterase activity // inferred from electronic annotation /// 0080031 // methyl salicylate esterase activity // inferred from electronic annotation /// 0080032 // methyl jasmonate esterase activity // inferred from electronic annotation","chr16:66995137-67008496 (+) // 64.14 // q22.1"]
["11759308_s_at",0.3154726,0.046698093,-0.034953594,0.034953594,-0.21341419,-0.15422535,0.4658443,0.16507082,1.1647075,0.21996774,1.1647075,"up","MAGI1",9223,"0006461 // protein complex assembly // non-traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // traceable author statement /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0051393 // alpha-actinin binding // inferred from physical interaction","chr3:65339200-66024528 (-) // 97.62 // p14.1"]
["200041_PM_s_at",0.16427326,0.12282276,0.017625809,-0.017625809,-0.19125557,-0.07496071,0.2384361,0.043238673,1.1456672,0.19618802,1.1456672,"up","ATP6V1G2-DDX39B /// DDX39B /// SNORD84","100532737 /// 692199 /// 7919","0000245 // spliceosomal complex assembly // inferred from direct assay /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred from genetic interaction /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // inferred from direct assay /// 0006406 // mRNA export from nucleus // inferred from genetic interaction /// 0006810 // transport // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from direct assay /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010501 // RNA secondary structure unwinding // inferred from direct assay /// 0015992 // proton transport // inferred from electronic annotation /// 0046784 // intronless viral mRNA export from host nucleus // inferred from direct assay /// 0051028 // mRNA transport // inferred from electronic annotation","0000346 // transcription export complex // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005687 // U4 snRNP // inferred from direct assay /// 0005688 // U6 snRNP // inferred from direct assay /// 0016471 // vacuolar proton-transporting V-type ATPase complex // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004004 // ATP-dependent RNA helicase activity // inferred from direct assay /// 0004004 // ATP-dependent RNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0008186 // RNA-dependent ATPase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0017070 // U6 snRNA binding // inferred from direct assay /// 0030621 // U4 snRNA binding // inferred from direct assay /// 0043008 // ATP-dependent protein binding // inferred from direct assay","chr6:31498022-31509756 (-) // 98.67 // p21.33"]
["11762442_at",-0.1316762,-0.026403189,0.026403427,-0.09850979,0.11659336,0.20077538,0.62815243,0.3095935,-1.0843608,-0.116844915,1.0843608,"down",0.026403427,"","","0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation"]
["11725616_at",-0.10376167,0.058338165,0.1679163,-0.063337326,0.013585091,-0.013585091,0.7663971,0.49236777,1.0438709,0.061943334,1.0438709,"up","PPP1CB",5500,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0005979 // regulation of glycogen biosynthetic process // inferred from electronic annotation /// 0005981 // regulation of glycogen catabolic process // inferred from electronic annotation /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006629 // lipid metabolic process // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0019433 // triglyceride catabolic process // traceable author statement /// 0030155 // regulation of cell adhesion // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0051301 // cell division // inferred from electronic annotation","0000164 // protein phosphatase type 1 complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0042587 // glycogen granule // inferred from electronic annotation /// 0070688 // MLL5-L complex // inferred from direct assay /// 0072357 // PTW/PP1 phosphatase complex // inferred from direct assay","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017018 // myosin phosphatase activity // inferred from sequence or structural similarity /// 0019901 // protein kinase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050115 // myosin-light-chain-phosphatase activity // inferred from direct assay /// 0050115 // myosin-light-chain-phosphatase activity // inferred from electronic annotation","chr2:28974625-29025806 (+) // 94.87 // p23.2"]
["11750195_a_at",-0.09682083,-0.04670334,-0.15452862,0.046703815,0.072496414,0.12055349,0.111214995,0.009129206,-1.1323099,-0.17926888,1.1323099,"down","UEVLD",55293,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006464 // cellular protein modification process // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0044262 // cellular carbohydrate metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation","chr11:18553758-18610281 (-) // 92.77 // p15.1"]
["11718231_x_at",0.31125832,0.36965275,0.44266605,-0.31125832,-0.3325596,-0.32791424,0.015009494,5.4619704e-5,1.622745,0.6984363,1.622745,"up","HLA-F",3134,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // inferred from electronic annotation /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002480 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0050776 // regulation of immune response // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0031901 // early endosome membrane // traceable author statement /// 0042612 // MHC class I protein complex // inferred from electronic annotation /// 0071556 // integral to lumenal side of endoplasmic reticulum membrane // traceable author statement","0032393 // MHC class I receptor activity // traceable author statement","chr6:29691060-29694303 (+) // 95.16 // p22.1"]
["11758074_s_at",-0.104987144,-0.16892266,0.10498667,-0.1621921,0.192667,0.3308406,0.66637564,0.35350177,-1.1303318,-0.17674626,1.1303318,"down","VGLL3",389136,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","","chr3:86987124-86987686 (-) // 76.69 // p12.1"]
["11750924_a_at",-0.058102608,-0.28404355,0.08369112,0.08728886,0.058102846,-0.06328654,0.6911582,0.38532472,-1.0818647,-0.1135201,1.0818647,"down","THSD7B",80731,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:137523114-138421130 (+) // 99.95 // q22.1"]
["11753093_a_at",-0.2191503,0.027722597,0.03184271,-0.4553647,-0.027722597,0.032837152,0.834547,0.6085545,1.0694643,0.096888356,1.0694643,"up","TPTE2P1",646405,"","","","chr13:25508129-25525628 (-) // 66.61 // q12.13"]
["11723787_x_at",-0.18461275,-0.013053894,0.1544261,0.07451582,0.013053894,-0.12053299,0.9920215,0.97737765,-1.0023774,-0.0034257793,1.0023774,"down","ZNF766",90321,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:52772832-52795972 (+) // 75.01 // q13.41"]
["11747119_a_at",0.09718084,0.005835533,-0.020885944,-0.005835533,-0.055918217,0.12284231,0.9711366,0.9181709,1.0048735,0.0070139174,1.0048735,"up","RGMA",56963,"0007411 // axon guidance // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation","","chr15:93586645-93617216 (-) // 99.71 // q26.1"]
["11736697_x_at",-0.19330502,-0.021409035,0.021409035,-0.15734339,0.14341164,0.14691973,0.7147548,0.41708863,-1.0783043,-0.10876435,1.0783043,"down","ERN2",10595,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from mutant phenotype /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016075 // rRNA catabolic process // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016891 // endoribonuclease activity, producing 5'-phosphomonoesters // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:23701628-23724821 (-) // 91.88 // p12.2"]
["11746250_a_at",0.1869874,0.013834953,-0.013834715,-0.054249525,-0.30510545,0.06729746,0.59521973,0.27500972,1.1170406,0.15968166,1.1170406,"up","C1orf88",128344,"0030030 // cell projection organization // inferred from electronic annotation /// 0031344 // regulation of cell projection organization // inferred from sequence or structural similarity /// 0031344 // regulation of cell projection organization // inferred from electronic annotation /// 0033674 // positive regulation of kinase activity // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from sequence or structural similarity /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from sequence or structural similarity /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0017137 // Rab GTPase binding // inferred from physical interaction /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0019894 // kinesin binding // inferred from physical interaction /// 0019894 // kinesin binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0043015 // gamma-tubulin binding // inferred from direct assay /// 0043015 // gamma-tubulin binding // inferred from electronic annotation /// 0048487 // beta-tubulin binding // inferred from direct assay /// 0048487 // beta-tubulin binding // inferred from electronic annotation","chr1:111889217-111895612 (+) // 96.27 // p13.2"]
["11761935_at",0.064273834,0.2437377,-0.031224728,0.03122425,-0.28020573,-0.31920815,0.37972516,0.109109,1.2155918,0.28165883,1.2155918,"up","HNRPLL",92906,"0006397 // mRNA processing // inferred from electronic annotation /// 0033120 // positive regulation of RNA splicing // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr2:38808216-38830071 (-) // 90.3 // p22.1"]
["11737738_at",-0.08222318,-0.0037653446,0.017872095,-0.23413324,0.003765583,0.0096690655,0.8222384,0.5854925,1.0358827,0.050860662,1.0358827,"up","AADACL4",343066,"0008152 // metabolic process // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004091 // carboxylesterase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr1:12704565-12727097 (+) // 99.94 // p36.21"]
["11741671_a_at",-0.18801308,-0.0333066,0.0333066,-0.56709576,0.066884995,0.08545494,0.90677303,0.75306493,1.0537853,0.07558099,1.0537853,"up","CCDC36",339834,"","","","chr3:49236932-49295537 (+) // 100.0 // p21.31"]
["11725055_at",0.04753542,-0.072900295,0.011397362,0.065552235,-0.011396885,-0.09735727,0.9567253,0.8769299,1.0067774,0.009744745,1.0067774,"up","HNMT",3176,"0002347 // response to tumor cell // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006972 // hyperosmotic response // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007585 // respiratory gaseous exchange // traceable author statement /// 0014075 // response to amine stimulus // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0042220 // response to cocaine // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0070555 // response to interleukin-1 // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation","0008168 // methyltransferase activity // inferred from electronic annotation /// 0008170 // N-methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046539 // histamine N-methyltransferase activity // inferred from electronic annotation","chr2:138721807-138774388 (+) // 88.1 // q22.1"]
["11747530_a_at",0.18973255,-0.005900383,0.005900383,0.13865566,-0.03549385,-0.03169918,0.86609113,0.6686721,1.0277029,0.03942329,1.0277029,"up","CSNK2B",1460,"0007165 // signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032927 // positive regulation of activin receptor signaling pathway // inferred from mutant phenotype /// 0033211 // adiponectin-mediated signaling pathway // inferred from direct assay /// 0043537 // negative regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0043623 // cellular protein complex assembly // non-traceable author statement /// 0045859 // regulation of protein kinase activity // non-traceable author statement /// 0045859 // regulation of protein kinase activity // inferred from electronic annotation /// 0051101 // regulation of DNA binding // non-traceable author statement /// 0061154 // endothelial tube morphogenesis // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005956 // protein kinase CK2 complex // inferred from electronic annotation /// 0005956 // protein kinase CK2 complex // non-traceable author statement /// 0031519 // PcG protein complex // inferred from direct assay","0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0019887 // protein kinase regulator activity // inferred from electronic annotation /// 0019887 // protein kinase regulator activity // non-traceable author statement /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:31634608-31637700 (+) // 96.33 // p21.33"]
["11715323_s_at",-0.1459961,-0.009298801,0.009298801,-0.20569038,0.13993788,0.1405673,0.82425547,0.58841777,-1.0523419,-0.073603556,1.0523419,"down","NKX1-2",390010,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr10:126135997-126138550 (-) // 92.69 // q26.13"]
["11738113_at",-0.035204172,-0.035204172,0.035204172,-0.15035272,0.14177632,0.07246661,0.8980165,0.7355301,-1.0231597,-0.033031404,1.0231597,"down","PCDHB1",29930,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr5:140430719-140433547 (+) // 100.0 // q31.3"]
["11727139_at",-0.1295929,-0.015328407,0.115968704,0.015328407,-0.08318329,0.10485363,0.93312055,0.8177423,-1.0153546,-0.021983705,1.0153546,"down","MYH7B",57644,"","0016020 // membrane // inferred from electronic annotation /// 0016459 // myosin complex // inferred from electronic annotation /// 0032982 // myosin filament // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation","chr20:33543703-33590240 (+) // 96.28 // q11.22"]
["11732018_a_at",-0.048036337,0.13711381,0.048036337,-0.0690546,0.107633114,-0.20125699,0.6965474,0.39198154,1.071722,0.09993076,1.071722,"up","HMGCLL1",54511,"0008152 // metabolic process // inferred from electronic annotation","","0003824 // catalytic activity // inferred from electronic annotation /// 0004419 // hydroxymethylglutaryl-CoA lyase activity // inferred from sequence or structural similarity /// 0004419 // hydroxymethylglutaryl-CoA lyase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:55299170-55444012 (-) // 95.63 // p12.1"]
["11751670_a_at",-0.23739624,0.031984806,-0.16458559,-0.031984806,0.20331526,0.11454439,0.37725794,0.107506536,-1.1636232,-0.21862398,1.1636232,"down","G6PC",2538,"0005975 // carbohydrate metabolic process // traceable author statement /// 0005977 // glycogen metabolic process // traceable author statement /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0005980 // glycogen catabolic process // inferred from electronic annotation /// 0006094 // gluconeogenesis // inferred from electronic annotation /// 0006094 // gluconeogenesis // inferred from mutant phenotype /// 0006641 // triglyceride metabolic process // inferred from electronic annotation /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0015760 // glucose-6-phosphate transport // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from mutant phenotype /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0042632 // cholesterol homeostasis // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046415 // urate metabolic process // inferred from electronic annotation /// 0051156 // glucose 6-phosphate metabolic process // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004346 // glucose-6-phosphatase activity // inferred from direct assay /// 0004346 // glucose-6-phosphatase activity // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042301 // phosphate ion binding // inferred from mutant phenotype","chr17:41052813-41063353 (+) // 99.7 // q21.31"]
["11746720_a_at",0.010966301,-0.010966301,0.040968895,-0.01684475,0.051029205,-0.02235794,0.9032838,0.7460343,1.0067561,0.009714167,1.0067561,"up","PPP1CB",5500,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0005979 // regulation of glycogen biosynthetic process // inferred from electronic annotation /// 0005981 // regulation of glycogen catabolic process // inferred from electronic annotation /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006629 // lipid metabolic process // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0019433 // triglyceride catabolic process // traceable author statement /// 0030155 // regulation of cell adhesion // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0051301 // cell division // inferred from electronic annotation","0000164 // protein phosphatase type 1 complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0042587 // glycogen granule // inferred from electronic annotation /// 0070688 // MLL5-L complex // inferred from direct assay /// 0072357 // PTW/PP1 phosphatase complex // inferred from direct assay","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017018 // myosin phosphatase activity // inferred from sequence or structural similarity /// 0019901 // protein kinase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050115 // myosin-light-chain-phosphatase activity // inferred from direct assay /// 0050115 // myosin-light-chain-phosphatase activity // inferred from electronic annotation","chr2:28974505-29011633 (+) // 94.25 // p23.2"]
["11752094_a_at",0.051272392,-0.03693676,0.01590252,0.20281029,-0.0568285,-0.015903473,0.8879401,0.71401924,-1.023336,-0.03327999,1.023336,"down","EIF4G2",1982,"0006412 // translation // inferred from direct assay /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006446 // regulation of translational initiation // inferred from direct assay /// 0007050 // cell cycle arrest // traceable author statement /// 0008219 // cell death // traceable author statement /// 0016070 // RNA metabolic process // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016281 // eukaryotic translation initiation factor 4F complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008135 // translation factor activity, nucleic acid binding // inferred from direct assay /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement","chr11:10819286-10830043 (-) // 99.97 // p15.3"]
["11741426_a_at",0.113796234,-0.17122269,-0.09818125,-0.15251589,0.09818125,0.18493223,0.77876145,0.51117957,-1.0683628,-0.09540169,1.0683628,"down","ISLR2",57611,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0045773 // positive regulation of axon extension // inferred from sequence or structural similarity /// 0045773 // positive regulation of axon extension // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from sequence or structural similarity /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr15:74422640-74429141 (+) // 88.61 // q24.1"]
["11762257_at",0.013121605,-0.013121128,-0.03216076,-0.10863495,0.15034771,0.042539597,0.8503692,0.637599,-1.027262,-0.038804144,1.027262,"down","","","","","","chr22:17394561-17403088 (-) // 99.9 // q11.1"]
["11726451_a_at",-0.13150501,0.04994297,-0.005145073,-0.1229229,0.046583652,0.005145073,0.98200643,0.94769967,-1.0035907,-0.005171011,1.0035907,"down","B3GAT1",27087,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0008499 // UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity // inferred from electronic annotation /// 0015018 // galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:134248397-134281812 (-) // 96.16 // q25"]
["200080_PM_s_at",-0.03547001,-0.06711197,-0.031877518,0.07591057,0.19518471,0.031877518,0.23924851,0.043534074,-1.1063522,-0.14581074,1.1063522,"down","H3F3A /// H3F3AP4 /// H3F3B","3020 /// 3021 /// 440926","0006334 // nucleosome assembly // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement","0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr1:226250427-226259702 (+) // 86.64 // q42.12"]
["11740232_x_at",0.023945808,-0.1043663,-0.20895767,0.085326195,0.03678322,-0.023945808,0.4551716,0.1575113,-1.0936724,-0.12918065,1.0936724,"down","ASL",435,"0000050 // urea cycle // inferred from electronic annotation /// 0000050 // urea cycle // traceable author statement /// 0006475 // internal protein amino acid acetylation // inferred from direct assay /// 0006526 // arginine biosynthetic process // inferred from electronic annotation /// 0006527 // arginine catabolic process // traceable author statement /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042450 // arginine biosynthetic process via ornithine // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004056 // argininosuccinate lyase activity // not recorded /// 0004056 // argininosuccinate lyase activity // inferred from electronic annotation /// 0004056 // argininosuccinate lyase activity // traceable author statement /// 0016829 // lyase activity // inferred from electronic annotation","chr7:65540816-65558330 (+) // 84.85 // q11.21"]
["11750862_a_at",-0.014891624,0.1793487,0.013100624,-0.0131008625,-0.17566347,0.33387947,0.98300254,0.9499921,1.007524,0.010814224,1.007524,"up","EMR3",84658,"0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation","chr19:14729928-14785656 (-) // 99.8 // p13.12"]
["11716717_a_at",0.017232895,0.05409527,-0.07811546,-0.008579254,-0.04600525,0.008579254,0.9148477,0.7740502,1.0091025,0.013072672,1.0091025,"up","NINJ1",4814,"0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0042246 // tissue regeneration // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr9:95883775-95896544 (-) // 86.94 // q22.31"]
["11737985_s_at",0.1939733,-0.012536287,0.012536287,0.012536287,-0.12562966,-0.11406231,0.44401956,0.14898477,1.1021926,0.1403764,1.1021926,"up","ODZ1",10178,"0006955 // immune response // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008201 // heparin binding // traceable author statement","chrX:123511822-124159443 (-) // 99.93 // q25"]
["11737702_at",-0.05163002,0.05163002,0.21504927,-0.23193002,-0.08059049,0.1769259,0.74309427,0.45778638,1.0843881,0.11688124,1.0843881,"up","CCDC108",255101,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation","chr2:219899556-219903302 (-) // 24.12 // q35"]
["11726546_a_at",0.025838852,0.11131239,-0.21467352,-0.059741497,0.1460936,-0.025838852,0.887512,0.7131424,-1.032407,-0.04601189,1.032407,"down","PITPNM3",83394,"0006810 // transport // inferred from electronic annotation /// 0046488 // phosphatidylinositol metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0005509 // calcium ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0008526 // phosphatidylinositol transporter activity // traceable author statement /// 0030971 // receptor tyrosine kinase binding // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:6354583-6459877 (-) // 93.15 // p13.2"]
["11740603_a_at",0.30635786,0.19199514,0.19309711,-0.19199467,-0.34221077,-0.27999973,0.039744046,0.00096679945,1.4160627,0.5018852,1.4160627,"up","APH1B",83464,"0006915 // apoptotic process // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007220 // Notch receptor processing // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0016485 // protein processing // inferred from direct assay /// 0016485 // protein processing // inferred from electronic annotation /// 0031293 // membrane protein intracellular domain proteolysis // traceable author statement /// 0043085 // positive regulation of catalytic activity // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from direct assay","chr15:63569748-63601324 (+) // 92.43 // q22.2"]
["11764126_at",-0.038875103,0.010209799,0.16596913,-0.010209799,-0.08039856,0.13581228,0.9035656,0.74670607,1.0215076,0.030699966,1.0215076,"up","","","","","","chr19:29585077-29585531 (+) // 98.91 // q12"]
["11719451_at",-0.043870926,0.0032539368,0.0880003,0.059179306,-0.008579254,-0.0032539368,0.9999011,0.9997901,1.0000086,1.2382698e-5,1.0000086,"up","RAB14",51552,"0006184 // GTP catabolic process // inferred from direct assay /// 0006184 // GTP catabolic process // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006895 // Golgi to endosome transport // inferred from sequence or structural similarity /// 0006895 // Golgi to endosome transport // traceable author statement /// 0006895 // Golgi to endosome transport // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // non-traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007269 // neurotransmitter secretion // non-traceable author statement /// 0007589 // body fluid secretion // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0009790 // embryo development // inferred from sequence or structural similarity /// 0009790 // embryo development // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // non-traceable author statement /// 0032880 // regulation of protein localization // inferred from electronic annotation /// 0045176 // apical protein localization // inferred from electronic annotation /// 0046907 // intracellular transport // non-traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from direct assay /// 0005622 // intracellular // non-traceable author statement /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005764 // lysosome // inferred from sequence or structural similarity /// 0005764 // lysosome // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from sequence or structural similarity /// 0005769 // early endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from sequence or structural similarity /// 0005770 // late endosome // inferred from electronic annotation /// 0005791 // rough endoplasmic reticulum // inferred from sequence or structural similarity /// 0005791 // rough endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005795 // Golgi stack // inferred from sequence or structural similarity /// 0005795 // Golgi stack // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from electronic annotation /// 0030140 // trans-Golgi network transport vesicle // inferred from sequence or structural similarity /// 0030140 // trans-Golgi network transport vesicle // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0042175 // nuclear outer membrane-endoplasmic reticulum membrane network // inferred from sequence or structural similarity /// 0042175 // nuclear outer membrane-endoplasmic reticulum membrane network // inferred from electronic annotation /// 0042599 // lamellar body // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0001948 // glycoprotein binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0003924 // GTPase activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from electronic annotation /// 0019003 // GDP binding // inferred from direct assay","chr9:123940414-123964371 (-) // 93.0 // q33.2"]
["11729990_x_at",0.18205214,-0.030786514,-0.10555458,-0.22525072,0.030786514,0.21821976,0.98805577,0.9645433,1.0050857,0.0073185298,1.0050857,"up","CACNA1A",773,"0000096 // sulfur amino acid metabolic process // inferred from electronic annotation /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from direct assay /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from sequence or structural similarity /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from direct assay /// 0007214 // gamma-aminobutyric acid signaling pathway // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007270 // neuron-neuron synaptic transmission // inferred from electronic annotation /// 0007274 // neuromuscular synaptic transmission // inferred from electronic annotation /// 0007416 // synapse assembly // inferred from electronic annotation /// 0007628 // adult walking behavior // inferred from electronic annotation /// 0008219 // cell death // inferred from direct assay /// 0008219 // cell death // inferred from electronic annotation /// 0008219 // cell death // non-traceable author statement /// 0014051 // gamma-aminobutyric acid secretion // inferred from electronic annotation /// 0014056 // regulation of acetylcholine secretion // inferred from electronic annotation /// 0016049 // cell growth // inferred from electronic annotation /// 0017156 // calcium ion-dependent exocytosis // inferred from electronic annotation /// 0017158 // regulation of calcium ion-dependent exocytosis // inferred from electronic annotation /// 0019226 // transmission of nerve impulse // inferred from electronic annotation /// 0021522 // spinal cord motor neuron differentiation // inferred from electronic annotation /// 0021590 // cerebellum maturation // inferred from electronic annotation /// 0021679 // cerebellar molecular layer development // inferred from electronic annotation /// 0021680 // cerebellar Purkinje cell layer development // inferred from electronic annotation /// 0021702 // cerebellar Purkinje cell differentiation // inferred from electronic annotation /// 0021750 // vestibular nucleus development // inferred from electronic annotation /// 0021953 // central nervous system neuron differentiation // inferred from electronic annotation /// 0030644 // cellular chloride ion homeostasis // inferred from electronic annotation /// 0032353 // negative regulation of hormone biosynthetic process // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0035249 // synaptic transmission, glutamatergic // inferred from electronic annotation /// 0042133 // neurotransmitter metabolic process // inferred from electronic annotation /// 0042391 // regulation of membrane potential // inferred from electronic annotation /// 0042445 // hormone metabolic process // inferred from electronic annotation /// 0043113 // receptor clustering // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0048265 // response to pain // inferred from electronic annotation /// 0048266 // behavioral response to pain // inferred from electronic annotation /// 0048791 // calcium ion-dependent exocytosis of neurotransmitter // inferred from electronic annotation /// 0048813 // dendrite morphogenesis // inferred from electronic annotation /// 0050770 // regulation of axonogenesis // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // traceable author statement /// 0050877 // neurological system process // inferred from electronic annotation /// 0050883 // musculoskeletal movement, spinal reflex action // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation /// 0050905 // neuromuscular process // inferred from electronic annotation /// 0051899 // membrane depolarization // traceable author statement /// 0051899 // membrane depolarization // inferred from electronic annotation /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from direct assay /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from sequence or structural similarity /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0060024 // rhythmic synaptic transmission // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005891 // voltage-gated calcium channel complex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0030425 // dendrite // inferred from electronic annotation /// 0042995 // cell projection // inferred from direct assay /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005245 // voltage-gated calcium channel activity // inferred from direct assay /// 0005245 // voltage-gated calcium channel activity // inferred from sequence or structural similarity /// 0005245 // voltage-gated calcium channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0005509 // calcium ion binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0008331 // high voltage-gated calcium channel activity // inferred from electronic annotation /// 0019905 // syntaxin binding // inferred from direct assay","chr19:13317255-13617317 (-) // 94.45 // p13.2"]
["11740750_a_at",-0.008834839,0.01656866,0.39014292,-0.40313148,-0.07256842,0.008834839,0.49224663,0.18508735,1.2211558,0.28824723,1.2211558,"up","PTPLAD2",401494,"0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016829 // lyase activity // inferred from electronic annotation","chr9:21006364-21031640 (-) // 90.86 // p21.3"]
["11715702_at",0.123143196,0.083319664,-0.11102152,0.14193916,-0.49797535,-0.083319664,0.71985644,0.42499146,1.1315229,0.17826577,1.1315229,"up","ITGA5",3678,"0001525 // angiogenesis // traceable author statement /// 0007044 // cell-substrate junction assembly // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007157 // heterophilic cell-cell adhesion // inferred from electronic annotation /// 0007159 // leukocyte cell-cell adhesion // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007613 // memory // inferred from electronic annotation /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // traceable author statement /// 0033631 // cell-cell adhesion mediated by integrin // inferred from electronic annotation /// 0035313 // wound healing, spreading of epidermal cells // inferred from expression pattern /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from mutant phenotype /// 0050900 // leukocyte migration // traceable author statement","0001726 // ruffle // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005911 // cell-cell junction // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay /// 0008305 // integrin complex // inferred from electronic annotation /// 0008305 // integrin complex // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from direct assay /// 0071062 // alphav-beta3 integrin-vitronectin complex // traceable author statement","0004872 // receptor activity // inferred from electronic annotation /// 0005161 // platelet-derived growth factor receptor binding // traceable author statement /// 0005178 // integrin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043184 // vascular endothelial growth factor receptor 2 binding // traceable author statement","chr12:54789045-54813263 (-) // 96.62 // q13.13"]
["11728527_a_at",-0.22914791,0.09755707,0.5161967,-0.0893383,-0.14300013,0.0893383,0.75928086,0.4814697,1.1296444,0.17586869,1.1296444,"up","PEX5L",51555,"0016558 // protein import into peroxisome matrix // not recorded /// 0042391 // regulation of membrane potential // inferred from electronic annotation /// 0043949 // regulation of cAMP-mediated signaling // inferred from sequence or structural similarity /// 0045055 // regulated secretory pathway // inferred from electronic annotation /// 0045185 // maintenance of protein location // inferred from electronic annotation /// 0051461 // positive regulation of corticotropin secretion // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005778 // peroxisomal membrane // not recorded /// 0005829 // cytosol // not recorded /// 0016020 // membrane // inferred from electronic annotation /// 0017071 // intracellular cyclic nucleotide activated cation channel complex // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0051286 // cell tip // inferred from electronic annotation","0000268 // peroxisome targeting sequence binding // inferred from direct assay /// 0005052 // peroxisome matrix targeting signal-1 binding // not recorded /// 0005221 // intracellular cyclic nucleotide activated cation channel activity // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0031267 // small GTPase binding // inferred from physical interaction","chr3:179517849-179754841 (-) // 97.57 // q26.33"]
["11746185_a_at",0.13453293,0.029209137,-0.029209137,0.06281853,-0.2471962,-0.21849537,0.4836897,0.17842515,1.1322051,0.17913537,1.1322051,"up","KIF5B",3799,"0007018 // microtubule-based movement // traceable author statement /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0007028 // cytoplasm organization // inferred from electronic annotation /// 0035617 // stress granule disassembly // inferred from sequence or structural similarity /// 0035617 // stress granule disassembly // inferred from electronic annotation /// 0047496 // vesicle transport along microtubule // inferred from sequence or structural similarity /// 0047496 // vesicle transport along microtubule // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005871 // kinesin complex // traceable author statement /// 0005874 // microtubule // inferred from electronic annotation /// 0031982 // vesicle // inferred from direct assay /// 0035253 // ciliary rootlet // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043227 // membrane-bounded organelle // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003777 // microtubule motor activity // inferred from sequence or structural similarity /// 0003777 // microtubule motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008017 // microtubule binding // inferred from sequence or structural similarity /// 0008017 // microtubule binding // inferred from electronic annotation","chr10:32299943-32345317 (-) // 89.36 // p11.22"]
["11724234_at",0.0073337555,-0.15355015,-0.13853073,0.13332987,-0.0073332787,0.047985077,0.32560387,0.080242455,-1.1118095,-0.1529096,1.1118095,"down","HGSNAT",138050,"0007041 // lysosomal transport // inferred from direct assay /// 0051259 // protein oligomerization // inferred from direct assay","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0015019 // heparan-alpha-glucosaminide N-acetyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from direct assay /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation","chr8:42995591-43057970 (+) // 84.38 // p11.21"]
["11722419_s_at",-0.052041054,-0.12491131,-0.16382885,0.2061739,0.12526226,0.052041054,0.1265434,0.011986881,-1.1821553,-0.24141951,1.1821553,"down","UTP3",57050,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007420 // brain development // inferred from sequence or structural similarity /// 0007420 // brain development // inferred from electronic annotation /// 0016458 // gene silencing // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","","chr4:71554195-71556332 (+) // 91.16 // q13.3"]
["11756021_x_at",0.023680687,-0.13396168,-0.06778622,0.0278368,0.11212826,-0.023680687,0.48554504,0.17994942,-1.0703757,-0.09811724,1.0703757,"down","SNRPB2",6629,"0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred from electronic annotation /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005686 // U2 snRNP // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017069 // snRNA binding // inferred from electronic annotation","chr20:16712347-16721647 (+) // 95.7 // p12.1"]
["11737650_at",0.19808483,0.03143549,-0.14883852,0.2052207,-0.031435013,-0.2495346,0.9124631,0.7680055,1.0368043,0.052143633,1.0368043,"up","ANKFY1",51479,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from sequence or structural similarity /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0046872 // metal ion binding // inferred from electronic annotation","chr17:4097774-4167274 (-) // 93.25 // p13.2"]
["11724644_at",0.07797098,0.20367336,0.111730576,-0.077970505,-0.18802738,-0.17170477,0.087666005,0.0055176117,1.2116944,0.27702582,1.2116944,"up","SPOPL",339745,"0016567 // protein ubiquitination // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","","chr2:139259349-139331117 (+) // 96.93 // q22.1"]
["11723151_s_at",0.14574575,-0.20935106,-0.0037379265,0.32973576,-0.1376195,0.0037379265,0.8503692,0.63773817,-1.0626986,-0.08773249,1.0626986,"down","C7orf10",79783,"0008152 // metabolic process // inferred from electronic annotation","","0003824 // catalytic activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr7:40174480-40900357 (+) // 87.42 // p14.1"]
["11740596_a_at",0.070198536,0.09364128,0.019181252,-0.21171474,-0.2521658,-0.019181252,0.23489824,0.0418009,1.1663717,0.22202761,1.1663717,"up","TGFB2",7042,"0000902 // cell morphogenesis // inferred from direct assay /// 0001525 // angiogenesis // traceable author statement /// 0001654 // eye development // inferred from direct assay /// 0001666 // response to hypoxia // inferred from mutant phenotype /// 0001837 // epithelial to mesenchymal transition // inferred from direct assay /// 0001837 // epithelial to mesenchymal transition // traceable author statement /// 0001942 // hair follicle development // inferred from direct assay /// 0001942 // hair follicle development // inferred from sequence or structural similarity /// 0002576 // platelet degranulation // traceable author statement /// 0003007 // heart morphogenesis // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from direct assay /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0007184 // SMAD protein import into nucleus // inferred from direct assay /// 0007267 // cell-cell signaling // traceable author statement /// 0007435 // salivary gland morphogenesis // inferred from expression pattern /// 0007507 // heart development // inferred from direct assay /// 0007596 // blood coagulation // traceable author statement /// 0008219 // cell death // inferred from direct assay /// 0008283 // cell proliferation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008347 // glial cell migration // inferred from direct assay /// 0009611 // response to wounding // inferred from expression pattern /// 0009790 // embryo development // traceable author statement /// 0010002 // cardioblast differentiation // inferred from direct assay /// 0010634 // positive regulation of epithelial cell migration // inferred from direct assay /// 0010693 // negative regulation of alkaline phosphatase activity // inferred from direct assay /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from direct assay /// 0010936 // negative regulation of macrophage cytokine production // inferred from direct assay /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // inferred from direct assay /// 0016049 // cell growth // inferred from electronic annotation /// 0016477 // cell migration // inferred from direct assay /// 0022601 // menstrual cycle phase // inferred from expression pattern /// 0023014 // signal transduction by phosphorylation // inferred from direct assay /// 0030097 // hemopoiesis // inferred from sequence or structural similarity /// 0030168 // platelet activation // traceable author statement /// 0030199 // collagen fibril organization // inferred from direct assay /// 0030307 // positive regulation of cell growth // inferred from direct assay /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0030593 // neutrophil chemotaxis // inferred from sequence or structural similarity /// 0030593 // neutrophil chemotaxis // traceable author statement /// 0031069 // hair follicle morphogenesis // inferred from sequence or structural similarity /// 0032147 // activation of protein kinase activity // inferred from direct assay /// 0032570 // response to progesterone stimulus // inferred from direct assay /// 0032874 // positive regulation of stress-activated MAPK cascade // inferred from direct assay /// 0032909 // regulation of transforming growth factor beta2 production // inferred from mutant phenotype /// 0033630 // positive regulation of cell adhesion mediated by integrin // inferred from direct assay /// 0040007 // growth // inferred from electronic annotation /// 0042060 // wound healing // inferred from sequence or structural similarity /// 0042416 // dopamine biosynthetic process // inferred from sequence or structural similarity /// 0042476 // odontogenesis // non-traceable author statement /// 0042637 // catagen // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043525 // positive regulation of neuron apoptotic process // inferred from direct assay /// 0045216 // cell-cell junction organization // inferred from direct assay /// 0045726 // positive regulation of integrin biosynthetic process // inferred from direct assay /// 0045778 // positive regulation of ossification // inferred from expression pattern /// 0045787 // positive regulation of cell cycle // inferred from sequence or structural similarity /// 0045823 // positive regulation of heart contraction // inferred from direct assay /// 0048103 // somatic stem cell division // inferred from sequence or structural similarity /// 0048566 // embryonic digestive tract development // inferred from expression pattern /// 0048666 // neuron development // inferred from sequence or structural similarity /// 0048699 // generation of neurons // traceable author statement /// 0050680 // negative regulation of epithelial cell proliferation // inferred from direct assay /// 0050680 // negative regulation of epithelial cell proliferation // inferred from mutant phenotype /// 0050714 // positive regulation of protein secretion // inferred from direct assay /// 0050777 // negative regulation of immune response // traceable author statement /// 0050778 // positive regulation of immune response // inferred from sequence or structural similarity /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0051795 // positive regulation of catagen // inferred from direct assay /// 0051891 // positive regulation of cardioblast differentiation // inferred from direct assay /// 0060038 // cardiac muscle cell proliferation // inferred from direct assay /// 0060317 // cardiac epithelial to mesenchymal transition // inferred from direct assay /// 0060389 // pathway-restricted SMAD protein phosphorylation // inferred from direct assay","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0030424 // axon // inferred from sequence or structural similarity /// 0031012 // extracellular matrix // inferred from direct assay /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0043025 // neuronal cell body // inferred from sequence or structural similarity","0001540 // beta-amyloid binding // inferred from direct assay /// 0004702 // receptor signaling protein serine/threonine kinase activity // inferred from direct assay /// 0005102 // receptor binding // inferred from mutant phenotype /// 0005114 // type II transforming growth factor beta receptor binding // inferred from direct assay /// 0005114 // type II transforming growth factor beta receptor binding // inferred from physical interaction /// 0005125 // cytokine activity // traceable author statement /// 0005160 // transforming growth factor beta receptor binding // inferred from direct assay /// 0005160 // transforming growth factor beta receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // traceable author statement","chr1:218519390-218617959 (+) // 97.05 // q41"]
["11738187_a_at",0.26751232,-0.1049099,-0.24206924,-0.00056552887,0.025063515,0.00056552887,0.93851286,0.8304436,-1.0244457,-0.034843452,1.0244457,"down","PHF12",57649,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016580 // Sin3 complex // inferred from direct assay /// 0017053 // transcriptional repressor complex // inferred from direct assay","0001106 // RNA polymerase II transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:27239161-27278508 (-) // 94.66 // q11.2"]
["11727449_a_at",0.09365034,0.11412954,-0.075899124,-0.018443108,0.018443108,-0.11770439,0.6341467,0.31605783,1.0593616,0.08319509,1.0593616,"up","TMOD4 /// VPS72","29765 /// 6944","0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005523 // tropomyosin binding // inferred from electronic annotation /// 0005523 // tropomyosin binding // traceable author statement","chr1:151142462-151148547 (-) // 97.21 // q21.3"]
["11750142_x_at",-0.021988869,-0.0044517517,-0.005923271,0.0044517517,0.0044517517,0.0919466,0.5230594,0.20921658,-1.0312575,-0.044404626,1.0312575,"down","YY1AP1",55249,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:155629247-155646462 (-) // 91.83 // q22"]
["11754804_x_at",-0.06572151,-0.10870552,-0.0750618,0.06572151,0.096307755,0.09421921,0.031232014,0.0005005753,-1.123951,-0.16857909,1.123951,"down","CDC16",8881,"0000075 // cell cycle checkpoint // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007067 // mitosis // traceable author statement /// 0007088 // regulation of mitosis // traceable author statement /// 0007094 // mitotic cell cycle spindle assembly checkpoint // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005680 // anaphase-promoting complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // traceable author statement /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // traceable author statement /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005876 // spindle microtubule // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr13:115024643-115038141 (+) // 84.31 // q34"]
["11730258_a_at",-0.2714038,0.23046112,0.12210369,-0.12210417,-0.15607977,0.22671652,0.9390753,0.8321642,1.031118,0.04420949,1.031118,"up","EPN3",55040,"","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0008289 // lipid binding // inferred from electronic annotation","chr17:48609903-48621109 (+) // 82.33 // q21.33"]
["11736350_at",0.1269834,-0.10894537,-0.028609991,0.12542701,0.021130562,-0.021130323,0.83474886,0.60900587,-1.0319214,-0.04533307,1.0319214,"down","ZNF366",167465,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0033147 // negative regulation of intracellular estrogen receptor signaling pathway // inferred from direct assay /// 0043627 // response to estrogen stimulus // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0000988 // protein binding transcription factor activity // inferred from direct assay /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0030331 // estrogen receptor binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:71738500-71803554 (-) // 89.03 // q13.2"]
["11746528_a_at",-0.009924889,0.07270765,0.244982,-0.071911335,0.009924889,-0.19890952,0.40072584,0.121203445,1.1404108,0.18955357,1.1404108,"up","ATP2B4",493,"0003407 // neural retina development // inferred from electronic annotation /// 0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0034220 // ion transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005388 // calcium-transporting ATPase activity // inferred from electronic annotation /// 0005388 // calcium-transporting ATPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:203652079-203703432 (+) // 93.18 // q32.1"]
["11720417_a_at",-0.19613218,0.113080025,0.17530966,-0.37448597,-0.075286865,0.075286865,0.71963984,0.4244848,1.1138703,0.1555812,1.1138703,"up","CAMSAP1",157922,"0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0022604 // regulation of cell morphogenesis // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation","0008017 // microtubule binding // inferred from electronic annotation","chr9:138700332-138799005 (-) // 99.31 // q34.3"]
["11753508_a_at",-0.04049635,0.04049635,-0.38976383,-0.29078007,0.051377773,0.19354343,0.8242648,0.5884857,-1.0827011,-0.114635,1.0827011,"down","ZC3H12D",340152,"0030308 // negative regulation of cell growth // inferred from direct assay /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation /// 2000134 // negative regulation of G1/S transition of mitotic cell cycle // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:149777776-149795732 (-) // 100.0 // q25.1"]
["11735853_x_at",-0.0002872944,0.0002872944,0.19055629,-0.120241165,-0.016675472,0.06608558,0.66722596,0.35464528,1.0622543,0.0871292,1.0622543,"up","OR10H1",26539,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr19:15917812-15918936 (-) // 98.49 // p13.12"]
["11751317_x_at",-0.0897131,-0.045310974,-0.10489464,0.1056118,0.10576916,0.045310974,0.07178061,0.003547251,-1.1215833,-0.16553682,1.1215833,"down","EI24",9538,"0006914 // autophagy // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","","chr11:125439353-125453922 (+) // 99.72 // q24.2"]
["11730314_a_at",-0.016095161,-0.17291927,-0.25604725,0.06496096,0.016095161,0.26847935,0.29203564,0.06435877,-1.2015241,-0.26486564,1.2015241,"down","ERMAP",114625,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","","chr1:43282758-43310655 (+) // 82.7 // p34.2"]
["11757793_s_at",-0.20616555,0.08819294,0.1643691,-0.28894544,0.092867374,-0.08819294,0.78616285,0.5235197,1.0793947,0.1102225,1.0793947,"up","TFPI",7035,"0007596 // blood coagulation // traceable author statement /// 0007596 // blood coagulation // inferred from electronic annotation /// 0007598 // blood coagulation, extrinsic pathway // traceable author statement /// 0007599 // hemostasis // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement","0004866 // endopeptidase inhibitor activity // traceable author statement /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr2:188328956-188329409 (-) // 90.56 // q32.1"]
["11737861_a_at",0.18655682,0.10933399,0.13772678,-0.36204433,-0.39122438,-0.10933399,0.1129282,0.009437546,1.3491712,0.43207338,1.3491712,"up","ZSCAN5A",79149,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:56732680-56739701 (-) // 99.09 // q13.43"]
["11733596_x_at",0.3266797,0.093961716,0.11487484,-0.41833448,-0.17864323,-0.093961716,0.19453035,0.028772928,1.3275982,0.4088186,1.3275982,"up","C12orf59",120939,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:10331556-10344401 (+) // 81.82 // p13.2"]
["11731226_a_at",-0.18998456,0.25389957,0.030563831,-0.030563831,-0.19233179,0.19046497,0.93199605,0.8152017,1.0297564,0.04230313,1.0297564,"up","TDRD6",221400,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007281 // germ cell development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from sequence or structural similarity /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0033391 // chromatoid body // inferred from sequence or structural similarity /// 0043186 // P granule // inferred from electronic annotation","","chr6:46655611-46672054 (+) // 95.56 // p12.3"]
["11756427_x_at",0.029044628,0.02416563,-0.092545986,-0.02416563,0.026760578,-0.15570307,0.83228743,0.6033745,1.0266355,0.037924092,1.0266355,"up","ARL16",339231,"0007264 // small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr17:79648209-79650802 (-) // 62.85 // q25.3"]
["11742921_s_at",0.052015305,-0.09130955,-0.06752682,0.3107376,0.17204952,-0.052015305,0.502566,0.19295807,-1.132254,-0.17919764,1.132254,"down","HSPA9",3313,"0006457 // protein folding // inferred from electronic annotation /// 0006611 // protein export from nucleus // inferred from electronic annotation /// 0006626 // protein targeting to mitochondrion // traceable author statement /// 0006916 // anti-apoptosis // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0042645 // mitochondrial nucleoid // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // traceable author statement /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr5:137890234-137911730 (-) // 94.55 // q31.2"]
["11752971_a_at",0.10190582,0.24613667,0.29137135,-0.33563423,-0.1019063,-0.118014336,0.1341571,0.013566449,1.3179749,0.3983229,1.3179749,"up","TMEM159",57146,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr16:21170009-21191541 (+) // 99.93 // p12.3"]
["11762069_a_at",0.008106232,-0.13035822,0.010200024,-0.082790375,0.012912273,-0.008106232,0.94481224,0.84603685,-1.0079024,-0.011355919,1.0079024,"down","SEPT6",23157,"0000910 // cytokinesis // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0030496 // midbody // inferred from electronic annotation /// 0031105 // septin complex // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0043679 // axon terminus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation","chrX:118762982-118827120 (-) // 98.31 // q24"]
["11749070_x_at",0.09628773,0.18009472,0.084513664,-0.54394484,-0.33470154,-0.084513664,0.2040633,0.031637143,1.3578763,0.44135204,1.3578763,"up","PAQR4",124222,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr16:3020451-3021983 (+) // 85.68 // p13.3"]
["11760386_at",0.2903533,-0.10606718,0.10606718,-0.12330866,-0.13348055,0.31460047,0.88127106,0.69961095,1.0551982,0.077514,1.0551982,"up","IL16",3603,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006935 // chemotaxis // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0030595 // leukocyte chemotaxis // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0050930 // induction of positive chemotaxis // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0005125 // cytokine activity // inferred from electronic annotation","chr15:81571896-81600901 (+) // 77.31 // q25.1"]
["11746682_a_at",0.1119194,0.21932125,0.14135075,-0.22637844,-0.1325264,-0.1119194,0.06391199,0.002724432,1.2435564,0.3144719,1.2435564,"up","AACS",65985,"0001889 // liver development // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010243 // response to organic nitrogen // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014074 // response to purine-containing compound // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0034201 // response to oleic acid // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042594 // response to starvation // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation /// 0050872 // white fat cell differentiation // inferred from electronic annotation /// 0060612 // adipose tissue development // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0071394 // cellular response to testosterone stimulus // inferred from electronic annotation /// 0071397 // cellular response to cholesterol // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0030729 // acetoacetate-CoA ligase activity // inferred from electronic annotation /// 0047760 // butyrate-CoA ligase activity // inferred from electronic annotation","chr12:125549979-125626866 (+) // 87.16 // q24.31"]
["11751744_a_at",0.036923885,0.1799407,-0.102427006,0.058998585,-0.036923885,-0.1926465,0.727352,0.43510216,1.0680677,0.09500305,1.0680677,"up","MMD",23531,"0019835 // cytolysis // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement","chr17:53471614-53499261 (-) // 89.98 // q22"]
["11737552_at",-0.34110355,-0.01907587,0.062319756,-0.03459406,0.11121607,0.01907587,0.68058056,0.3710642,-1.0951935,-0.1311858,1.0951935,"down","B3GALT1",8708,"0006486 // protein glycosylation // inferred from direct assay /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0009312 // oligosaccharide biosynthetic process // inferred from electronic annotation /// 0030259 // lipid glycosylation // non-traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0008378 // galactosyltransferase activity // inferred from electronic annotation /// 0008499 // UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity // inferred from direct assay /// 0008499 // UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr2:168675181-168727366 (+) // 98.34 // q24.3"]
["11725970_x_at",-0.119241714,-0.14608479,-0.120770454,0.16627407,0.229208,0.119241714,0.037357904,0.0008111551,-1.231378,-0.30027366,1.231378,"down","HNRNPF",3185,"0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0043484 // regulation of RNA splicing // inferred from direct assay /// 0043484 // regulation of RNA splicing // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030530 // heterogeneous nuclear ribonucleoprotein complex // traceable author statement /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003727 // single-stranded RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr10:43881064-43892277 (-) // 98.43 // q11.21"]
["11746333_a_at",-0.076776505,-0.04628992,-0.11259127,0.100328445,0.046290398,0.14373636,0.09665676,0.0067695375,-1.1292287,-0.17533772,1.1292287,"down","DENND4C",55667,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr9:19331984-19372357 (+) // 99.92 // p22.1"]
["11731055_x_at",-0.012833595,-0.033773422,0.012833595,0.047432423,0.22315836,-0.2603836,0.9726941,0.9227154,-1.0102135,-0.014660218,1.0102135,"down","FNIP1",96459,"0001932 // regulation of protein phosphorylation // inferred from direct assay /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr5:130977406-131132799 (-) // 93.89 // q31.1"]
["11733327_at",-0.01964426,0.10010624,0.03465271,-0.0907464,-0.15565014,0.01964426,0.42861396,0.13885993,1.0821913,0.11395561,1.0821913,"up","NKD1",85407,"0016055 // Wnt receptor signaling pathway // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr16:50582241-50670816 (+) // 78.0 // q12.1"]
["11749077_x_at",-0.049705505,0.33557796,0.23879242,-0.35004997,-0.17931175,0.049705505,0.382422,0.11033295,1.2611796,0.3347737,1.2611796,"up","HDGF",3068,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement","0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation /// 0008201 // heparin binding // inferred from electronic annotation /// 0008201 // heparin binding // traceable author statement","chr1:156713098-156721293 (-) // 92.53 // q23.1"]
["11732024_a_at",0.07623196,-0.0979166,-0.13964272,0.2720294,-0.036140442,0.036140442,0.59445447,0.2743673,-1.1053109,-0.14445224,1.1053109,"down","MAMDC4",158056,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr9:139746818-139755251 (+) // 97.89 // q34.3"]
["11726609_at",0.055702686,-0.22187662,-0.1452918,0.36101866,0.2771945,-0.055702686,0.40065807,0.12114239,-1.2294321,-0.29799205,1.2294321,"down","MTF2",22823,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:93544794-93604631 (+) // 98.38 // p22.1"]
["11726833_a_at",-0.15458632,-0.024997711,0.08482218,-0.12360525,0.024997711,0.09923077,0.9074209,0.75537306,-1.0222833,-0.03179508,1.0222833,"down","C11orf52 /// HSPB2 /// HSPB2-C11orf52","100528019 /// 3316 /// 91894","0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // non-traceable author statement /// 0043085 // positive regulation of catalytic activity // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0008047 // enzyme activator activity // traceable author statement","chr11:111782851-111784817 (+) // 96.08 // q23.1"]
["11730050_a_at",0.14129448,-0.051501036,0.32451534,-0.3227141,0.051500797,-0.16945481,0.42586264,0.13705716,1.2184038,0.28499237,1.2184038,"up","CA13 /// LOC100507258","100507258 /// 377677","0006730 // one-carbon metabolic process // inferred from electronic annotation","","0004089 // carbonate dehydratase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:86157715-86196299 (+) // 82.92 // q21.2"]
["11734875_a_at",0.071733,0.05614853,-0.1439209,-0.05614853,0.06315851,-0.06501579,0.95409673,0.8709596,1.0097435,0.01398879,1.0097435,"up","PPFIBP1",8496,"0007155 // cell adhesion // traceable author statement /// 0015074 // DNA integration // inferred from electronic annotation","0005886 // plasma membrane // non-traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0008907 // integrase activity // inferred from electronic annotation","chr12:27677044-27848497 (+) // 84.11 // p11.23"]
["11756215_x_at",0.18704128,-0.015467644,-0.043497086,0.082850456,0.015467644,-0.020245552,0.9435052,0.8425552,1.0116204,0.016668038,1.0116204,"up","UBA52",7311,"0000075 // cell cycle checkpoint // traceable author statement /// 0000080 // G1 phase of mitotic cell cycle // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000187 // activation of MAPK activity // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006464 // cellular protein modification process // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006916 // anti-apoptosis // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007220 // Notch receptor processing // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0007254 // JNK cascade // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016044 // cellular membrane organization // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016197 // endosomal transport // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0046788 // egress of virus within host cell // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // traceable author statement /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement","0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr19:18682688-18686051 (+) // 60.92 // p13.11"]
["11749742_a_at",-0.07810545,0.09316301,0.07810545,-0.123568535,-0.19739723,0.08222246,0.64744604,0.33057043,1.0797037,0.11063544,1.0797037,"up","KLHL3",26249,"0016567 // protein ubiquitination // inferred from electronic annotation /// 0016567 // protein ubiquitination // traceable author statement /// 0070294 // renal sodium ion absorption // inferred from mutant phenotype /// 0072156 // distal tubule morphogenesis // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0031463 // Cul3-RING ubiquitin ligase complex // traceable author statement","0003779 // actin binding // inferred from electronic annotation /// 0005198 // structural molecule activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr5:136957190-137008565 (-) // 87.56 // q31.2"]
["11726138_at",-0.12592506,-0.117436886,0.037800312,-0.02637291,0.026372433,0.0668726,0.51537937,0.20270303,-1.0649688,-0.0908112,1.0649688,"down","MTMR9",66036,"0016311 // dephosphorylation // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0030234 // enzyme regulator activity // inferred from electronic annotation","chr8:11141999-11185655 (+) // 90.89 // p23.1"]
["11746063_a_at",0.18316698,-0.04536915,0.042962074,-0.042962074,-0.08947563,0.18081665,0.8818516,0.7004467,1.031059,0.044126928,1.031059,"up","IKBKB",3551,"0001782 // B cell homeostasis // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0003009 // skeletal muscle contraction // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0007252 // I-kappaB phosphorylation // traceable author statement /// 0007252 // I-kappaB phosphorylation // inferred from electronic annotation /// 0008063 // Toll signaling pathway // traceable author statement /// 0009615 // response to virus // traceable author statement /// 0009636 // response to toxin // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0043122 // regulation of I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from electronic annotation /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0008385 // IkappaB kinase complex // traceable author statement /// 0008385 // IkappaB kinase complex // inferred from electronic annotation /// 0009898 // internal side of plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0035631 // CD40 receptor complex // inferred from sequence or structural similarity /// 0045121 // membrane raft // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008384 // IkappaB kinase activity // traceable author statement /// 0008384 // IkappaB kinase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr8:42128819-42179979 (+) // 100.0 // p11.21"]
["11733452_a_at",0.0071525574,0.14821053,0.03491211,-0.0126981735,-0.0071525574,-0.0550375,0.40738544,0.12532906,1.0631814,0.08838777,1.0631814,"up","IRX5",10265,"0002027 // regulation of heart rate // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0042551 // neuron maturation // inferred from electronic annotation /// 0048468 // cell development // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0060040 // retinal bipolar neuron differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005499 // vitamin D binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr16:54965110-54968397 (+) // 93.75 // q12.2"]
["11761685_at",-0.5250845,0.011518955,0.11472607,-0.011518955,-0.023020744,0.29553366,0.68837345,0.38190475,-1.1646887,-0.2199444,1.1646887,"down","IST1",9798,"0007049 // cell cycle // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr16:71929433-71958103 (+) // 97.86 // q22.2"]
["11755716_x_at",0.12712455,-0.09070587,0.16321921,-0.022536516,-0.047266245,0.022536516,0.6811496,0.37181887,1.0587056,0.08230142,1.0587056,"up","RNF157",114804,"","","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:74139859-74163196 (-) // 69.19 // q25.1"]
["11750438_x_at",0.044207573,0.018194199,-0.017980576,0.017979622,-0.13779163,-0.094864845,0.45592478,0.1580853,1.0616925,0.086365946,1.0616925,"up","PGAM1",5223,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006096 // glycolysis // traceable author statement /// 0006096 // glycolysis // inferred from electronic annotation /// 0006110 // regulation of glycolysis // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0043456 // regulation of pentose-phosphate shunt // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0045730 // respiratory burst // inferred from direct assay","0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004082 // bisphosphoglycerate mutase activity // inferred from electronic annotation /// 0004083 // bisphosphoglycerate 2-phosphatase activity // inferred from electronic annotation /// 0004619 // phosphoglycerate mutase activity // inferred from mutant phenotype /// 0004619 // phosphoglycerate mutase activity // non-traceable author statement /// 0004619 // phosphoglycerate mutase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0016868 // intramolecular transferase activity, phosphotransferases // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction","chr10:99187430-99193197 (+) // 97.79 // q24.1"]
["11745256_s_at",-0.52233267,-0.33891582,-0.25275278,0.2527523,0.65731955,0.50833845,0.076309055,0.0040568393,-1.7951908,-0.8441372,1.7951908,"down","CPEB4",80315,"","","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr5:173316342-173387312 (+) // 96.46 // q35.2"]
["11757301_s_at",-0.16914845,-0.0026082993,0.02082634,-0.073102,0.03861332,0.0026082993,0.8264664,0.59221643,-1.0278882,-0.039683327,1.0278882,"down","SDCBP",6386,"0006612 // protein targeting to membrane // non-traceable author statement /// 0006930 // substrate-dependent cell migration, cell extension // non-traceable author statement /// 0007265 // Ras protein signal transduction // inferred from electronic annotation /// 0007268 // synaptic transmission // non-traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0030036 // actin cytoskeleton organization // non-traceable author statement /// 0035556 // intracellular signal transduction // non-traceable author statement /// 0042327 // positive regulation of phosphorylation // inferred from direct assay /// 0046330 // positive regulation of JNK cascade // inferred by curator","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // non-traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005895 // interleukin-5 receptor complex // inferred from sequence or structural similarity /// 0005895 // interleukin-5 receptor complex // inferred from electronic annotation /// 0005912 // adherens junction // non-traceable author statement /// 0005912 // adherens junction // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation","0001948 // glycoprotein binding // inferred from electronic annotation /// 0005109 // frizzled binding // inferred from physical interaction /// 0005137 // interleukin-5 receptor binding // inferred from sequence or structural similarity /// 0005137 // interleukin-5 receptor binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0008093 // cytoskeletal adaptor activity // non-traceable author statement /// 0019838 // growth factor binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0045545 // syndecan binding // inferred from physical interaction /// 0045545 // syndecan binding // non-traceable author statement /// 0045545 // syndecan binding // inferred from electronic annotation /// 0046875 // ephrin receptor binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0050839 // cell adhesion molecule binding // inferred from electronic annotation","chr8:59494755-59495419 (+) // 78.67 // q12.1"]
["11725836_x_at",0.12476921,0.032794952,-0.03279543,0.43480682,-0.12390709,-0.26708794,0.9671448,0.9078538,1.0188811,0.026985679,1.0188811,"up","NFKBIB",4793,"0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006351 // transcription, DNA-dependent // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007253 // cytoplasmic sequestering of NF-kappaB // inferred from electronic annotation /// 0008063 // Toll signaling pathway // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0003713 // transcription coactivator activity // traceable author statement /// 0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr19:39390577-39399534 (+) // 85.8 // q13.2"]
["11762619_a_at",0.24341345,0.057480812,-0.22156239,-0.027004242,-0.0791688,0.027004242,0.8920244,0.72235423,1.0373002,0.052833516,1.0373002,"up","BMP5",653,"0001501 // skeletal system development // non-traceable author statement /// 0001501 // skeletal system development // inferred from electronic annotation /// 0001503 // ossification // inferred from electronic annotation /// 0003323 // type B pancreatic cell development // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0010719 // negative regulation of epithelial to mesenchymal transition // non-traceable author statement /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0010894 // negative regulation of steroid biosynthetic process // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030539 // male genitalia development // inferred from electronic annotation /// 0032348 // negative regulation of aldosterone biosynthetic process // inferred from direct assay /// 0040007 // growth // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // non-traceable author statement /// 0043569 // negative regulation of insulin-like growth factor receptor signaling pathway // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0050679 // positive regulation of epithelial cell proliferation // inferred from direct assay /// 0051216 // cartilage development // inferred from electronic annotation /// 0071676 // negative regulation of mononuclear cell migration // non-traceable author statement /// 1900006 // positive regulation of dendrite development // inferred from direct assay /// 2000065 // negative regulation of cortisol biosynthetic process // inferred from direct assay /// 2000105 // positive regulation of DNA-dependent DNA replication // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from sequence or structural similarity /// 0005615 // extracellular space // inferred from electronic annotation /// 0031988 // membrane-bounded vesicle // inferred from sequence or structural similarity /// 0031988 // membrane-bounded vesicle // inferred from electronic annotation","0005125 // cytokine activity // non-traceable author statement /// 0005125 // cytokine activity // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation /// 0070700 // BMP receptor binding // inferred from physical interaction","chr6:55619724-55739677 (-) // 99.95 // p12.1"]
["11715261_s_at",-0.18098474,-0.085573435,-0.012076616,0.054338455,0.060272217,0.012076616,0.275699,0.057640318,-1.0981746,-0.13510741,1.0981746,"down","LOC440563 /// LOC649330","440563 /// 649330","","0030529 // ribonucleoprotein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation","chr1:12907235-12908237 (-) // 96.11 // p36.21 /// chr1:13182965-13183967 (-) // 95.71 // p36.21"]
["11749600_a_at",-0.028274536,-0.22887325,-0.2682724,0.38766956,0.028274536,0.16182613,0.24556908,0.0458895,-1.2903211,-0.36773014,1.2903211,"down","PRG2 /// SLC43A3","29015 /// 5553","0006955 // immune response // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0008201 // heparin binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr11:57182626-57193952 (-) // 100.0 // q12.1"]
["11730214_at",-0.0734272,0.22938967,0.38310194,-0.08845639,-0.11106706,0.0734272,0.51645696,0.20385791,1.1661232,0.22172016,1.1661232,"up","DUOX2",50506,"0006590 // thyroid hormone generation // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0009566 // fertilization // inferred from electronic annotation /// 0009615 // response to virus // inferred from direct assay /// 0019221 // cytokine-mediated signaling pathway // inferred from direct assay /// 0019221 // cytokine-mediated signaling pathway // inferred from sequence or structural similarity /// 0030282 // bone mineralization // inferred from electronic annotation /// 0030878 // thyroid gland development // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0042335 // cuticle development // inferred from sequence or structural similarity /// 0042403 // thyroid hormone metabolic process // inferred from electronic annotation /// 0042445 // hormone metabolic process // inferred from electronic annotation /// 0042446 // hormone biosynthetic process // inferred from electronic annotation /// 0042744 // hydrogen peroxide catabolic process // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0048855 // adenohypophysis morphogenesis // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from direct assay /// 0051591 // response to cAMP // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation","0004601 // peroxidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016174 // NAD(P)H oxidase activity // inferred from direct assay /// 0016174 // NAD(P)H oxidase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation","chr15:45384851-45406359 (-) // 90.89 // q21.1"]
["11717125_at",-0.10121727,-0.17387962,-0.2850666,0.21693993,0.21222591,0.10121727,0.08485681,0.005151881,-1.2865571,-0.36351547,1.2865571,"down","SH3PXD2A",9644,"0006801 // superoxide metabolic process // inferred from direct assay /// 0006801 // superoxide metabolic process // inferred from mutant phenotype /// 0007154 // cell communication // inferred from electronic annotation /// 0072593 // reactive oxygen species metabolic process // inferred from electronic annotation","0002102 // podosome // inferred from direct assay /// 0002102 // podosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr10:105353790-105615251 (-) // 96.15 // q24.33"]
["11732291_a_at",-0.057636738,-0.061683178,0.04265833,-0.04265833,0.10284042,0.05064726,0.6339184,0.3158106,-1.0442716,-0.062496968,1.0442716,"down","FAM186B",84070,"","0043234 // protein complex // inferred from direct assay","","chr12:49976658-49999433 (-) // 94.05 // q13.12"]
["11732603_a_at",0.28086567,0.024456978,-0.024456978,0.052815437,-0.197546,-0.17781448,0.4864301,0.18063618,1.149604,0.20113693,1.149604,"up","TRIM45",80263,"","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:117653683-117664476 (-) // 90.94 // p13.1"]
["11757251_at",-0.14390278,0.019787788,0.30980277,-0.1087544,-0.019788027,0.26709437,0.97638875,0.93259174,1.0109502,0.015711943,1.0109502,"up","HPVC1",3262,"","","","chr7:54268916-54270114 (-) // 43.66 // p11.2"]
["11727994_at",0.04172778,0.08333039,-0.04172802,0.10404539,-0.08333063,-0.15356827,0.73526007,0.44542813,1.0512176,0.07206127,1.0512176,"up","STX11",8676,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006944 // cellular membrane fusion // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005484 // SNAP receptor activity // inferred from electronic annotation /// 0005484 // SNAP receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr6:144471653-144513075 (+) // 80.96 // q24.2"]
["11743329_a_at",0.03845787,-0.03845787,-0.13486958,0.10758686,0.050293446,-0.07386303,0.6838973,0.37624517,-1.0518743,-0.072962284,1.0518743,"down","PGP",283871,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation","","0008967 // phosphoglycolate phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr16:2260888-2264843 (-) // 87.27 // p13.3"]
["11732222_s_at",0.072607994,-0.020659447,0.005350113,0.0772419,-0.005350113,-0.17841625,0.7925527,0.5337436,1.0385766,0.05460763,1.0385766,"up","FAM18B1 /// FAM18B2","201158 /// 51030","","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr17:18684307-18710026 (+) // 94.58 // p11.2 /// chr17:15440294-15467151 (-) // 93.58 // p12"]
["11746493_a_at",0.14828205,0.12508011,0.031075478,-0.066951275,-0.1873827,-0.031075478,0.19707566,0.029527085,1.1460068,0.19661564,1.1460068,"up","PIP4K2A",5305,"0016310 // phosphorylation // non-traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0035855 // megakaryocyte development // inferred from electronic annotation /// 0046488 // phosphatidylinositol metabolic process // inferred from electronic annotation /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016307 // phosphatidylinositol phosphate kinase activity // inferred from electronic annotation /// 0016308 // 1-phosphatidylinositol-4-phosphate 5-kinase activity // non-traceable author statement /// 0016309 // 1-phosphatidylinositol-5-phosphate 4-kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr10:22825666-22880642 (-) // 90.86 // p12.2"]
["11752518_a_at",0.34994602,0.241673,0.22363138,-0.22363186,-0.41928053,-0.32098818,0.040417682,0.0010006647,1.5084326,0.59305024,1.5084326,"up","ATG2B",55102,"","","","chr14:96756472-96777600 (-) // 99.95 // q32.2"]
["11748920_x_at",-0.33375502,0.045289516,0,-0.057875156,0,0.19073772,0.68382114,0.37608004,-1.1022433,-0.14044271,1.1022433,"down","SLC11A1",6556,"0000060 // protein import into nucleus, translocation // inferred from electronic annotation /// 0001818 // negative regulation of cytokine production // inferred from sequence or structural similarity /// 0001818 // negative regulation of cytokine production // inferred from electronic annotation /// 0001819 // positive regulation of cytokine production // inferred from sequence or structural similarity /// 0001819 // positive regulation of cytokine production // inferred from electronic annotation /// 0002309 // T cell proliferation involved in immune response // inferred from sequence or structural similarity /// 0002309 // T cell proliferation involved in immune response // inferred from electronic annotation /// 0002369 // T cell cytokine production // inferred from sequence or structural similarity /// 0002369 // T cell cytokine production // inferred from electronic annotation /// 0002606 // positive regulation of dendritic cell antigen processing and presentation // inferred from sequence or structural similarity /// 0002606 // positive regulation of dendritic cell antigen processing and presentation // inferred from electronic annotation /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from sequence or structural similarity /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006826 // iron ion transport // inferred from mutant phenotype /// 0006826 // iron ion transport // inferred from electronic annotation /// 0006828 // manganese ion transport // inferred from sequence or structural similarity /// 0006828 // manganese ion transport // inferred from electronic annotation /// 0006876 // cellular cadmium ion homeostasis // inferred from genetic interaction /// 0006879 // cellular iron ion homeostasis // inferred from mutant phenotype /// 0006909 // phagocytosis // inferred from sequence or structural similarity /// 0006909 // phagocytosis // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from sequence or structural similarity /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement /// 0007035 // vacuolar acidification // inferred from sequence or structural similarity /// 0007035 // vacuolar acidification // inferred from electronic annotation /// 0009617 // response to bacterium // inferred from direct assay /// 0010628 // positive regulation of gene expression // inferred from sequence or structural similarity /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0015707 // nitrite transport // inferred from sequence or structural similarity /// 0015707 // nitrite transport // inferred from electronic annotation /// 0032147 // activation of protein kinase activity // inferred from sequence or structural similarity /// 0032147 // activation of protein kinase activity // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from sequence or structural similarity /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032623 // interleukin-2 production // inferred from sequence or structural similarity /// 0032623 // interleukin-2 production // inferred from electronic annotation /// 0032632 // interleukin-3 production // inferred from sequence or structural similarity /// 0032632 // interleukin-3 production // inferred from electronic annotation /// 0032729 // positive regulation of interferon-gamma production // inferred from sequence or structural similarity /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0034341 // response to interferon-gamma // inferred from sequence or structural similarity /// 0034341 // response to interferon-gamma // inferred from electronic annotation /// 0042060 // wound healing // inferred from sequence or structural similarity /// 0042060 // wound healing // inferred from electronic annotation /// 0042116 // macrophage activation // inferred from sequence or structural similarity /// 0042116 // macrophage activation // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from sequence or structural similarity /// 0042742 // defense response to bacterium // inferred from electronic annotation /// 0042832 // defense response to protozoan // inferred from sequence or structural similarity /// 0042832 // defense response to protozoan // inferred from electronic annotation /// 0043091 // L-arginine import // inferred from sequence or structural similarity /// 0043091 // L-arginine import // inferred from electronic annotation /// 0045342 // MHC class II biosynthetic process // inferred from sequence or structural similarity /// 0045342 // MHC class II biosynthetic process // inferred from electronic annotation /// 0045730 // respiratory burst // inferred from sequence or structural similarity /// 0045730 // respiratory burst // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048002 // antigen processing and presentation of peptide antigen // inferred from sequence or structural similarity /// 0048002 // antigen processing and presentation of peptide antigen // inferred from electronic annotation /// 0048255 // mRNA stabilization // inferred from sequence or structural similarity /// 0048255 // mRNA stabilization // inferred from electronic annotation /// 0050766 // positive regulation of phagocytosis // inferred from sequence or structural similarity /// 0050766 // positive regulation of phagocytosis // inferred from electronic annotation /// 0050829 // defense response to Gram-negative bacterium // inferred from sequence or structural similarity /// 0050829 // defense response to Gram-negative bacterium // inferred from electronic annotation /// 0055072 // iron ion homeostasis // inferred from sequence or structural similarity /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0060586 // multicellular organismal iron ion homeostasis // inferred from sequence or structural similarity /// 0060586 // multicellular organismal iron ion homeostasis // inferred from electronic annotation /// 0070574 // cadmium ion transmembrane transport // inferred from genetic interaction /// 0070839 // divalent metal ion export // inferred from sequence or structural similarity /// 0070839 // divalent metal ion export // inferred from electronic annotation /// 0071421 // manganese ion transmembrane transport // inferred from sequence or structural similarity /// 0071421 // manganese ion transmembrane transport // inferred from electronic annotation","0005764 // lysosome // inferred from sequence or structural similarity /// 0005764 // lysosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from sequence or structural similarity /// 0005770 // late endosome // inferred from electronic annotation /// 0005773 // vacuole // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from mutant phenotype /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0009279 // cell outer membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // inferred from direct assay /// 0030670 // phagocytic vesicle membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // traceable author statement /// 0070821 // tertiary granule membrane // inferred from direct assay","0005215 // transporter activity // inferred from electronic annotation /// 0005384 // manganese ion transmembrane transporter activity // inferred from sequence or structural similarity /// 0005384 // manganese ion transmembrane transporter activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046915 // transition metal ion transmembrane transporter activity // inferred from genetic interaction /// 0051139 // metal ion:hydrogen antiporter activity // inferred from genetic interaction","chr2:219246995-219258903 (+) // 71.79 // q35"]
["11730609_a_at",-0.255296,0.044535875,0.123613834,-0.11098504,-0.044535637,0.17369366,0.93378305,0.8192791,-1.0246325,-0.03510649,1.0246325,"down","EFCAB5",374786,"","","0005509 // calcium ion binding // inferred from electronic annotation","chr17:28268622-28435470 (+) // 99.53 // q11.2"]
["11763612_x_at",-0.008903503,-0.007191658,0.10069227,-0.06724453,0.040435314,0.007191658,0.7788442,0.5113188,1.0243709,0.034738187,1.0243709,"up","GLI2",2736,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0001501 // skeletal system development // inferred from electronic annotation /// 0001501 // skeletal system development // inferred from sequence or structural similarity /// 0001649 // osteoblast differentiation // inferred from direct assay /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001822 // kidney development // inferred from sequence or structural similarity /// 0002009 // morphogenesis of an epithelium // inferred from electronic annotation /// 0002076 // osteoblast development // inferred from electronic annotation /// 0002076 // osteoblast development // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007224 // smoothened signaling pathway // inferred from direct assay /// 0007224 // smoothened signaling pathway // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from sequence or structural similarity /// 0007389 // pattern specification process // inferred from electronic annotation /// 0007411 // axon guidance // inferred from electronic annotation /// 0007411 // axon guidance // inferred from sequence or structural similarity /// 0007418 // ventral midline development // inferred from sequence or structural similarity /// 0007418 // ventral midline development // inferred from electronic annotation /// 0007442 // hindgut morphogenesis // inferred from electronic annotation /// 0007442 // hindgut morphogenesis // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from electronic annotation /// 0007507 // heart development // inferred from sequence or structural similarity /// 0008283 // cell proliferation // inferred from direct assay /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008589 // regulation of smoothened signaling pathway // inferred from electronic annotation /// 0009913 // epidermal cell differentiation // inferred from direct assay /// 0009953 // dorsal/ventral pattern formation // inferred from electronic annotation /// 0009954 // proximal/distal pattern formation // inferred from sequence or structural similarity /// 0021508 // floor plate formation // inferred from electronic annotation /// 0021508 // floor plate formation // inferred from sequence or structural similarity /// 0021513 // spinal cord dorsal/ventral patterning // inferred from sequence or structural similarity /// 0021513 // spinal cord dorsal/ventral patterning // inferred from electronic annotation /// 0021517 // ventral spinal cord development // inferred from sequence or structural similarity /// 0021517 // ventral spinal cord development // inferred from electronic annotation /// 0021696 // cerebellar cortex morphogenesis // inferred from electronic annotation /// 0021696 // cerebellar cortex morphogenesis // inferred from sequence or structural similarity /// 0021775 // smoothened signaling pathway involved in ventral spinal cord interneuron specification // inferred from electronic annotation /// 0021775 // smoothened signaling pathway involved in ventral spinal cord interneuron specification // inferred from sequence or structural similarity /// 0021776 // smoothened signaling pathway involved in spinal cord motor neuron cell fate specification // inferred from electronic annotation /// 0021904 // dorsal/ventral neural tube patterning // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0021938 // smoothened signaling pathway involved in regulation of cerebellar granule cell precursor cell proliferation // inferred from electronic annotation /// 0021965 // spinal cord ventral commissure morphogenesis // inferred from electronic annotation /// 0021965 // spinal cord ventral commissure morphogenesis // inferred from sequence or structural similarity /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030324 // lung development // inferred from sequence or structural similarity /// 0030879 // mammary gland development // inferred from sequence or structural similarity /// 0030879 // mammary gland development // inferred from electronic annotation /// 0030902 // hindbrain development // inferred from sequence or structural similarity /// 0030902 // hindbrain development // inferred from electronic annotation /// 0032331 // negative regulation of chondrocyte differentiation // inferred from electronic annotation /// 0033089 // positive regulation of T cell differentiation in thymus // inferred from sequence or structural similarity /// 0035295 // tube development // inferred from sequence or structural similarity /// 0035295 // tube development // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from sequence or structural similarity /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048566 // embryonic digestive tract development // inferred from electronic annotation /// 0048566 // embryonic digestive tract development // inferred from sequence or structural similarity /// 0048589 // developmental growth // inferred from electronic annotation /// 0048589 // developmental growth // inferred from sequence or structural similarity /// 0048646 // anatomical structure formation involved in morphogenesis // inferred from electronic annotation /// 0048666 // neuron development // inferred from sequence or structural similarity /// 0048666 // neuron development // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from sequence or structural similarity /// 0048856 // anatomical structure development // inferred from electronic annotation /// 0060032 // notochord regression // inferred from electronic annotation /// 0060322 // head development // inferred from electronic annotation /// 0060513 // prostatic bud formation // inferred from electronic annotation /// 0060603 // mammary gland duct morphogenesis // inferred from electronic annotation /// 0060831 // smoothened signaling pathway involved in dorsal/ventral neural tube patterning // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0090103 // cochlea morphogenesis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0031512 // motile primary cilium // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:121554920-121732612 (+) // 99.64 // q14.2"]
["11730611_at",0.21903086,-0.07128763,-0.009341955,-0.1244185,0.009341717,0.34236622,0.9517887,0.8658002,-1.0207499,-0.029629463,1.0207499,"down","MCOLN2",255231,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation","chr1:85391267-85462805 (-) // 89.85 // p22.3"]
["11755337_a_at",-0.16665149,0.23456597,-0.0038366318,0.0038366318,-0.036930323,0.11029935,0.9912196,0.97364515,-1.0030378,-0.0043759905,1.0030378,"down","ENPP2",5168,"0006796 // phosphate-containing compound metabolic process // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0006935 // chemotaxis // non-traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0030334 // regulation of cell migration // inferred from direct assay /// 0034638 // phosphatidylcholine catabolic process // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from sequence or structural similarity /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004528 // phosphodiesterase I activity // traceable author statement /// 0004551 // nucleotide diphosphatase activity // traceable author statement /// 0004622 // lysophospholipase activity // inferred from direct assay /// 0005044 // scavenger receptor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0008134 // transcription factor binding // traceable author statement /// 0008270 // zinc ion binding // inferred from sequence or structural similarity /// 0016787 // hydrolase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030247 // polysaccharide binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047391 // alkylglycerophosphoethanolamine phosphodiesterase activity // inferred from electronic annotation","chr8:120569498-120605248 (-) // 98.27 // q24.12"]
["11725253_at",0.23596096,-0.17424965,-0.15399885,0.38559198,0.05414915,-0.054148674,0.7344465,0.44438505,-1.11674,-0.15929332,1.11674,"down","HNF1B",6928,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001714 // endodermal cell fate specification // inferred from electronic annotation /// 0001822 // kidney development // inferred from direct assay /// 0001822 // kidney development // inferred from mutant phenotype /// 0001822 // kidney development // inferred from electronic annotation /// 0001826 // inner cell mass cell differentiation // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007492 // endoderm development // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0030073 // insulin secretion // inferred from electronic annotation /// 0030111 // regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0030902 // hindbrain development // inferred from electronic annotation /// 0031018 // endocrine pancreas development // inferred from mutant phenotype /// 0035565 // regulation of pronephros size // inferred from mutant phenotype /// 0039020 // pronephric nephron tubule development // inferred from genetic interaction /// 0042663 // regulation of endodermal cell fate specification // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048557 // embryonic digestive tract morphogenesis // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from electronic annotation /// 0048793 // pronephros development // inferred from mutant phenotype /// 0048806 // genitalia development // inferred from mutant phenotype /// 0050673 // epithelial cell proliferation // inferred from electronic annotation /// 0060261 // positive regulation of transcription initiation from RNA polymerase II promoter // inferred from direct assay /// 0060429 // epithelium development // inferred from electronic annotation /// 0060677 // ureteric bud elongation // inferred from electronic annotation /// 0061017 // hepatoblast differentiation // inferred from electronic annotation /// 0072095 // regulation of branch elongation involved in ureteric bud branching // inferred from electronic annotation /// 0072176 // nephric duct development // inferred from electronic annotation /// 0072177 // mesonephric duct development // inferred from electronic annotation /// 0072179 // nephric duct formation // inferred from electronic annotation /// 0072181 // mesonephric duct formation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr17:36046434-36105096 (-) // 98.68 // q12"]
["11742059_a_at",-0.07350254,0.037649155,0.10477638,-0.037649155,0.06600857,-0.05304718,0.8576919,0.651535,1.0218643,0.031203616,1.0218643,"up","CHORDC1",26973,"0006950 // response to stress // inferred from electronic annotation /// 0010824 // regulation of centrosome duplication // inferred from electronic annotation /// 0061077 // chaperone-mediated protein folding // inferred from sequence or structural similarity /// 0061077 // chaperone-mediated protein folding // inferred from electronic annotation /// 0080134 // regulation of response to stress // inferred from sequence or structural similarity /// 0080134 // regulation of response to stress // inferred from electronic annotation /// 2000299 // negative regulation of Rho-dependent protein serine/threonine kinase activity // inferred from electronic annotation","","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051879 // Hsp90 protein binding // inferred from physical interaction","chr11:89933599-89956532 (-) // 99.25 // q14.3"]
["11716144_a_at",-0.00259161,-0.35473442,-0.26030016,0.051039696,0.04076004,0.00259161,0.34396467,0.08925881,-1.1788166,-0.23733923,1.1788166,"down","PDCD6IP",10015,"0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation /// 0048306 // calcium-dependent protein binding // inferred from physical interaction","chr3:33839556-33911194 (+) // 94.95 // p22.3"]
["11755037_s_at",0.07332802,-0.0440979,-0.047805786,0.30055618,0.020414352,-0.020414352,0.6885925,0.38212332,-1.0765216,-0.10637731,1.0765216,"down","KIAA0319L",79932,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0044433 // cytoplasmic vesicle part // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr1:35899092-36023004 (-) // 84.05 // p34.3"]
["11750878_a_at",-0.031789303,0.16009903,0.19395828,-0.20453978,0.031789303,-0.04785967,0.43150216,0.14094244,1.1336375,0.18095945,1.1336375,"up","ISM2",145501,"","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay","","chr14:77941499-77965159 (-) // 94.09 // q24.3"]
["11742643_x_at",-0.1862483,0.039749146,0.087427616,-0.08919096,-0.039749146,0.14047766,0.942573,0.8403599,-1.016448,-0.02353644,1.016448,"down","MBD3L5",284428,"","","","chr19:7030593-7033022 (+) // 100.0 // p13.2 /// chr19:7037754-7040184 (-) // 99.48 // p13.2 /// chr19:7056215-7058645 (-) // 99.22 // p13.2"]
["11739679_a_at",-0.009520531,0.009520531,-0.0784421,0.08921957,-0.04097414,0.12345314,0.53077006,0.21582179,-1.0594975,-0.08338015,1.0594975,"down","NTRK2",4915,"0001764 // neuron migration // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007190 // activation of adenylate cyclase activity // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007612 // learning // inferred from sequence or structural similarity /// 0008284 // positive regulation of cell proliferation // inferred from sequence or structural similarity /// 0010628 // positive regulation of gene expression // inferred from sequence or structural similarity /// 0010976 // positive regulation of neuron projection development // inferred from sequence or structural similarity /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation /// 0021954 // central nervous system neuron development // inferred from sequence or structural similarity /// 0021987 // cerebral cortex development // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from sequence or structural similarity /// 0031547 // brain-derived neurotrophic factor receptor signaling pathway // inferred from mutant phenotype /// 0032314 // regulation of Rac GTPase activity // inferred from sequence or structural similarity /// 0043410 // positive regulation of MAPK cascade // inferred from sequence or structural similarity /// 0043524 // negative regulation of neuron apoptotic process // inferred from sequence or structural similarity /// 0046777 // protein autophosphorylation // inferred from sequence or structural similarity /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050772 // positive regulation of axonogenesis // inferred from sequence or structural similarity","0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005030 // neurotrophin receptor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0043121 // neurotrophin binding // inferred from direct assay /// 0043121 // neurotrophin binding // inferred from sequence or structural similarity /// 0048403 // brain-derived neurotrophic factor binding // inferred from sequence or structural similarity /// 0060175 // brain-derived neurotrophic factor-activated receptor activity // inferred from mutant phenotype","chr9:87283465-87638505 (+) // 98.13 // q21.33"]
["11725957_x_at",-0.041277885,-0.042099,-0.042487144,0.13346767,0.041277885,0.051698685,0.14423701,0.015752451,-1.0848053,-0.117436066,1.0848053,"down","TIMM17A",10440,"0006626 // protein targeting to mitochondrion // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005744 // mitochondrial inner membrane presequence translocase complex // inferred from direct assay /// 0005744 // mitochondrial inner membrane presequence translocase complex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031305 // integral to mitochondrial inner membrane // inferred from direct assay","0015450 // P-P-bond-hydrolysis-driven protein transmembrane transporter activity // inferred from electronic annotation","chr1:201924611-201939787 (+) // 95.09 // q32.1"]
["11748674_x_at",0.312562,0.22342682,0.100773335,-0.10077286,-0.5197377,-0.2947607,0.15785533,0.018915873,1.4313183,0.51734453,1.4313183,"up","AFF4",27125,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007286 // spermatid development // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay","0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr5:132239554-132299206 (-) // 79.87 // q31.1"]
["11742088_at",0.023234367,-0.2748437,-0.023234367,-0.22307587,0.10461235,0.21136093,0.7625699,0.48676646,-1.0886803,-0.12258031,1.0886803,"down","ANKK1",255239,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr11:113258512-113271140 (+) // 94.34 // q23.2"]
["11748317_s_at",-0.1562748,0.123661995,0.32145977,0.026721954,-0.026722431,-0.21922112,0.6579724,0.34259734,1.1245565,0.1693562,1.1245565,"up","MCFD2",90411,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0019752 // carboxylic acid metabolic process // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement","0005509 // calcium ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:47131967-47168994 (-) // 68.26 // p21"]
["11755089_a_at",-0.25093365,-0.19142771,-0.08712959,0.08712959,0.12590456,0.11558199,0.07838421,0.0043749805,-1.2192852,-0.2860357,1.2192852,"down","ZNF615",284370,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:52494723-52507153 (-) // 78.2 // q13.41"]
["11728080_a_at",0.013594627,-0.019330978,0.012195587,-0.013062477,-0.012195587,0.012727737,0.8655252,0.6675557,1.0043972,0.0063298456,1.0043972,"up","TBC1D22B",55633,"0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation","chr6:37225540-37300745 (+) // 97.69 // p21.2"]
["11759502_at",0.05761814,0.026141167,-0.057966232,-0.011627197,-0.042639732,0.011627197,0.81893945,0.5798273,1.015937,0.022810899,1.015937,"up","TRAF3",7187,"0001817 // regulation of cytokine production // inferred from sequence or structural similarity /// 0001817 // regulation of cytokine production // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // inferred from sequence or structural similarity /// 0002224 // toll-like receptor signaling pathway // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030162 // regulation of proteolysis // inferred from mutant phenotype /// 0030162 // regulation of proteolysis // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from electronic annotation /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0032648 // regulation of interferon-beta production // inferred from sequence or structural similarity /// 0032648 // regulation of interferon-beta production // inferred from electronic annotation /// 0033209 // tumor necrosis factor-mediated signaling pathway // inferred from mutant phenotype /// 0033209 // tumor necrosis factor-mediated signaling pathway // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0050688 // regulation of defense response to virus // inferred from sequence or structural similarity /// 0050688 // regulation of defense response to virus // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0009898 // internal side of plasma membrane // inferred from sequence or structural similarity /// 0009898 // internal side of plasma membrane // inferred from electronic annotation /// 0035631 // CD40 receptor complex // inferred from sequence or structural similarity /// 0035631 // CD40 receptor complex // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0031996 // thioesterase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:103243815-103377837 (+) // 96.73 // q32.32"]
["11758049_s_at",-0.40541267,-0.14934254,0.010128021,-0.010128498,0.018054962,0.036714077,0.48854962,0.18209915,-1.1458535,-0.19642262,1.1458535,"down","TIA1",7072,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0017148 // negative regulation of translation // inferred from electronic annotation /// 0042036 // negative regulation of cytokine biosynthetic process // inferred from electronic annotation /// 0048024 // regulation of nuclear mRNA splicing, via spliceosome // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008143 // poly(A) RNA binding // traceable author statement /// 0017091 // AU-rich element binding // inferred from electronic annotation","chr2:70436575-70437024 (-) // 100.0 // p13.3"]
["11738062_x_at",-0.09728241,-0.03992939,0.03992939,-0.07146692,0.046611786,0.16147041,0.6830445,0.37482598,-1.0555288,-0.077965885,1.0555288,"down","S100A7A",338324,"","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:153390419-153395697 (+) // 79.13 // q21.3"]
["11749614_a_at",0.10690403,-0.12539291,0.059103012,0.48261166,-0.1944046,-0.059103012,0.9203493,0.78809625,-1.0445126,-0.062829934,1.0445126,"down","UBE2I",7329,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006464 // cellular protein modification process // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0010469 // regulation of receptor activity // inferred from electronic annotation /// 0016567 // protein ubiquitination // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0016925 // protein sumoylation // inferred from direct assay /// 0016925 // protein sumoylation // inferred from electronic annotation /// 0033145 // positive regulation of intracellular steroid hormone receptor signaling pathway // inferred from electronic annotation /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0000795 // synaptonemal complex // traceable author statement /// 0001650 // fibrillar center // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016604 // nuclear body // inferred from electronic annotation /// 0016605 // PML body // inferred from direct assay /// 0030425 // dendrite // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // traceable author statement /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from physical interaction /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0019789 // SUMO ligase activity // inferred from direct assay /// 0019789 // SUMO ligase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0043398 // HLH domain binding // inferred from electronic annotation /// 0043425 // bHLH transcription factor binding // inferred from electronic annotation","chr16:1364031-1371295 (+) // 96.07 // p13.3"]
["11733595_x_at",-0.10191345,-0.008655548,0.013816357,0.008655071,-0.07506323,0.014230728,0.9098311,0.76142645,-1.0103523,-0.014858369,1.0103523,"down","PLEKHG6",55200,"0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0000922 // spindle pole // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation","0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation","chr12:6420098-6437671 (+) // 94.9 // p13.31"]
["11740062_a_at",0.27427387,0.011920929,-0.07313156,0.258873,-0.011920929,-0.0774765,0.97404146,0.925884,1.0101218,0.014529294,1.0101218,"up","SIGMAR1",10280,"0006696 // ergosterol biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0038003 // opioid receptor signaling pathway // inferred from electronic annotation /// 0043523 // regulation of neuron apoptotic process // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005640 // nuclear outer membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005811 // lipid particle // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0000247 // C-8 sterol isomerase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004985 // opioid receptor activity // inferred from electronic annotation /// 0008144 // drug binding // traceable author statement","chr9:34634719-34637806 (-) // 94.43 // p13.3"]
["11744338_a_at",-0.18244648,-0.19972229,-0.13582993,0.13582993,0.2535801,0.2778492,0.04383585,0.0011718518,-1.3150212,-0.39508602,1.3150212,"down","COPS7A",50813,"0010388 // cullin deneddylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008180 // signalosome // inferred from direct assay /// 0008180 // signalosome // inferred from electronic annotation","","chr12:6807789-6841031 (+) // 98.43 // p13.31"]
["11738440_at",-0.17858124,-0.16785145,0.003964901,0.041550636,-0.003964901,0.07705593,0.31417888,0.07476179,-1.1113936,-0.1523698,1.1113936,"down","FGF22",27006,"0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0030154 // cell differentiation // non-traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // non-traceable author statement /// 0005730 // nucleolus // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation","0008083 // growth factor activity // inferred from electronic annotation","chr19:639894-643703 (+) // 94.56 // p13.3"]
["11738948_at",-0.11303377,-0.071569204,0.034024715,-0.034024715,0.07919693,0.09723425,0.484621,0.17910226,-1.0700376,-0.097661495,1.0700376,"down","C11orf40",143501,"","","","chr11:4592652-4594703 (-) // 56.57 // p15.4"]
["11761930_at",-0.26051855,0.35586548,0.1882143,-0.64953184,0.02114153,-0.02114153,0.6515391,0.33555022,1.2405939,0.31103095,1.2405939,"up","OK/SW-CL.58",100131766,"","","","chr13:30165242-30167180 (-) // 83.97 // q12.3"]
["11715354_a_at",-0.015426874,-0.0035254955,0.07509589,0.0035254955,-0.04037881,0.06570935,0.9419196,0.8386794,1.0063246,0.009095806,1.0063246,"up","COL1A2",1278,"0001501 // skeletal system development // inferred from mutant phenotype /// 0001568 // blood vessel development // inferred from mutant phenotype /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0007266 // Rho protein signal transduction // inferred from direct assay /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008217 // regulation of blood pressure // inferred from mutant phenotype /// 0030168 // platelet activation // traceable author statement /// 0030199 // collagen fibril organization // inferred from mutant phenotype /// 0042476 // odontogenesis // non-traceable author statement /// 0043589 // skin morphogenesis // inferred from mutant phenotype /// 0050900 // leukocyte migration // traceable author statement /// 0070208 // protein heterotrimerization // inferred from electronic annotation /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005584 // collagen type I // inferred from direct assay /// 0005584 // collagen type I // inferred from mutant phenotype /// 0005584 // collagen type I // traceable author statement /// 0005584 // collagen type I // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay","0005201 // extracellular matrix structural constituent // non-traceable author statement /// 0005201 // extracellular matrix structural constituent // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030674 // protein binding, bridging // inferred from mutant phenotype /// 0042802 // identical protein binding // inferred from direct assay /// 0046332 // SMAD binding // inferred from electronic annotation /// 0048407 // platelet-derived growth factor binding // inferred from direct assay","chr7:94023872-94060539 (+) // 98.1 // q21.3"]
["11723784_a_at",0.087459564,-0.13651466,-0.035092354,0.035092354,0.1109705,-0.05679226,0.78081316,0.514393,-1.0408816,-0.05780602,1.0408816,"down","LIMCH1",22998,"0031032 // actomyosin structure organization // inferred from electronic annotation","","0003779 // actin binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:41362803-41702061 (+) // 97.9 // p13"]
["11756233_a_at",0.13593769,0.013552666,-0.013552666,0.081869125,-0.03775406,-0.30725622,0.65847045,0.34350574,1.0965916,0.13302632,1.0965916,"up","AKIRIN2",55122,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032755 // positive regulation of interleukin-6 production // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from sequence or structural similarity /// 0017053 // transcriptional repressor complex // inferred from electronic annotation","","chr6:88384612-88411934 (-) // 96.9 // q15"]
["11739683_x_at",0.12873793,-0.087008476,-0.0046081543,0.0046076775,-0.0046081543,0.09550047,0.9239846,0.7962282,-1.0135797,-0.019459572,1.0135797,"down","PHF2",5253,"0001889 // liver development // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006482 // protein demethylation // inferred from direct assay /// 0016568 // chromatin modification // inferred from electronic annotation /// 0033169 // histone H3-K9 demethylation // inferred from direct assay /// 0033169 // histone H3-K9 demethylation // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0061188 // negative regulation of chromatin silencing at rDNA // inferred from mutant phenotype","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation","0003713 // transcription coactivator activity // inferred from direct assay /// 0005506 // iron ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0032452 // histone demethylase activity // inferred from direct assay /// 0032454 // histone demethylase activity (H3-K9 specific) // inferred from direct assay /// 0035064 // methylated histone residue binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:96338908-96441869 (+) // 92.34 // q22.31"]
["11718383_a_at",0.010437965,-0.041648865,-0.07116032,0.17823887,0.06831837,-0.010437965,0.41796115,0.13169648,-1.0813475,-0.11283017,1.0813475,"down","AIFM1",9131,"0006309 // apoptotic DNA fragmentation // inferred from electronic annotation /// 0006309 // apoptotic DNA fragmentation // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0030182 // neuron differentiation // inferred from direct assay /// 0032981 // mitochondrial respiratory chain complex I assembly // inferred from mutant phenotype /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 0051402 // neuron apoptotic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070059 // intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from electronic annotation /// 0070059 // intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from sequence or structural similarity","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from direct assay /// 0005758 // mitochondrial intermembrane space // inferred from mutant phenotype /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0044455 // mitochondrial membrane part // inferred from mutant phenotype /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0009055 // electron carrier activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation","chrX:129263336-129299808 (-) // 97.27 // q26.1"]
["11758934_x_at",-0.12139702,-0.39797306,-0.19380188,0.46306658,0.27070332,0.12139702,0.14298376,0.015436146,-1.4367207,-0.52277964,1.4367207,"down","RAB27A",5873,"0006184 // GTP catabolic process // inferred from sequence or structural similarity /// 0006184 // GTP catabolic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006605 // protein targeting // inferred from electronic annotation /// 0006887 // exocytosis // inferred from direct assay /// 0006887 // exocytosis // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007596 // blood coagulation // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0030318 // melanocyte differentiation // inferred from electronic annotation /// 0032400 // melanosome localization // inferred from electronic annotation /// 0032402 // melanosome transport // inferred from electronic annotation /// 0043316 // cytotoxic T cell degranulation // inferred from electronic annotation /// 0043320 // natural killer cell degranulation // inferred from electronic annotation /// 0043473 // pigmentation // inferred from electronic annotation /// 0045921 // positive regulation of exocytosis // inferred from mutant phenotype /// 0051875 // pigment granule localization // inferred from electronic annotation /// 0051904 // pigment granule transport // inferred from electronic annotation /// 0071985 // multivesicular body sorting pathway // inferred from mutant phenotype","0001750 // photoreceptor outer segment // inferred from electronic annotation /// 0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0005770 // late endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030141 // secretory granule // inferred from electronic annotation /// 0030425 // dendrite // inferred from direct assay /// 0030667 // secretory granule membrane // inferred from electronic annotation /// 0032585 // multivesicular body membrane // inferred from direct assay /// 0042470 // melanosome // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation /// 0070382 // exocytic vesicle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from sequence or structural similarity /// 0003924 // GTPase activity // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from sequence or structural similarity /// 0005525 // GTP binding // inferred from electronic annotation /// 0031489 // myosin V binding // inferred from electronic annotation","chr15:55495166-55582045 (-) // 87.33 // q21.3"]
["11747010_a_at",-0.06106949,-0.057524443,0.011205673,-0.011205912,0.111866,0.083480835,0.3491288,0.091871165,-1.0696778,-0.09717634,1.0696778,"down","VSIG4",11326,"0006957 // complement activation, alternative pathway // inferred from electronic annotation /// 0032703 // negative regulation of interleukin-2 production // inferred from electronic annotation /// 0042130 // negative regulation of T cell proliferation // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chrX:65241609-65259891 (-) // 99.36 // q12"]
["11751310_a_at",-0.010332584,0.047296524,-0.06878567,0.19080734,0.010332108,-0.08544874,0.8327103,0.60472906,-1.0346701,-0.049170863,1.0346701,"down","SNIP1",79753,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007249 // I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0031047 // gene silencing by RNA // inferred from electronic annotation /// 0035196 // production of miRNAs involved in gene silencing by miRNA // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr1:38003154-38019905 (-) // 99.79 // p34.3"]
["11717475_a_at",-0.12275696,0.2460773,0.16410065,-0.013586283,0.013586044,-0.050834656,0.6838955,0.37622216,1.0812888,0.11275192,1.0812888,"up","CHGB",1114,"","0005576 // extracellular region // inferred from electronic annotation /// 0030141 // secretory granule // inferred from electronic annotation","0005179 // hormone activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr20:5891792-5906007 (+) // 98.54 // p12.3"]
["11715406_a_at",-0.032002926,0.1309309,0.18970346,-0.13321352,-0.10361719,0.032002926,0.3991556,0.12042143,1.120767,0.16448638,1.120767,"up","COL6A1",1291,"0007155 // cell adhesion // non-traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0070208 // protein heterotrimerization // inferred from physical interaction /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005589 // collagen type VI // non-traceable author statement /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0042383 // sarcolemma // inferred from electronic annotation /// 0043234 // protein complex // inferred from physical interaction","0048407 // platelet-derived growth factor binding // inferred from direct assay","chr21:47401644-47424962 (+) // 97.83 // q22.3"]
["11746099_a_at",0.14088821,0.11329079,0.092303276,-0.22593927,-0.12435293,-0.092303276,0.07145016,0.0035150093,1.1999929,0.26302585,1.1999929,"up","PPP4R1",9989,"0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0007165 // signal transduction // non-traceable author statement","0030289 // protein phosphatase 4 complex // inferred from sequence or structural similarity","0004721 // phosphoprotein phosphatase activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0030362 // protein phosphatase type 4 regulator activity // non-traceable author statement","chr18:9547710-9614513 (-) // 99.76 // p11.22"]
["11735786_at",0.11401439,-0.14593077,-0.19111896,0.03617978,0.04259658,-0.03617978,0.7160982,0.4189806,-1.0632966,-0.088544026,1.0632966,"down","BARX2",8538,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001502 // cartilage condensation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0014902 // myotube differentiation // inferred from electronic annotation /// 0042637 // catagen // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation","0000976 // transcription regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr11:129245834-129322174 (+) // 87.33 // q24.3"]
["11718968_a_at",0.15037918,-0.02159071,0.021590233,0.2636428,-0.058667183,-0.05061531,0.99685377,0.9915663,-1.0009204,-0.0013272673,1.0009204,"down","DDX6",1656,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0033962 // cytoplasmic mRNA processing body assembly // inferred from direct assay /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement","0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0010494 // cytoplasmic stress granule // inferred from direct assay /// 0016442 // RNA-induced silencing complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003724 // RNA helicase activity // traceable author statement /// 0004386 // helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr11:118618471-118662060 (-) // 91.83 // q23.3"]
["11736488_a_at",0.084845066,-0.07129145,-0.16666794,0.010251045,-0.010251045,0.053545475,0.7120331,0.41419688,-1.0489069,-0.06888666,1.0489069,"down","MIR4800 /// MXD4","100616358 /// 10608","0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // traceable author statement","chr4:2249159-2263840 (-) // 93.79 // p16.3"]
["11733280_a_at",-0.09019375,0.021326065,-0.09154463,0.23264599,-0.021326065,0.11290741,0.40085128,0.12128196,-1.1184855,-0.16154648,1.1184855,"down","ACHE",43,"0001507 // acetylcholine catabolic process in synaptic cleft // non-traceable author statement /// 0001919 // regulation of receptor recycling // inferred from electronic annotation /// 0002076 // osteoblast development // inferred from expression pattern /// 0006260 // DNA replication // traceable author statement /// 0006581 // acetylcholine catabolic process // inferred from direct assay /// 0006581 // acetylcholine catabolic process // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from direct assay /// 0007155 // cell adhesion // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007271 // synaptic transmission, cholinergic // not recorded /// 0007399 // nervous system development // traceable author statement /// 0007416 // synapse assembly // not recorded /// 0007416 // synapse assembly // traceable author statement /// 0007517 // muscle organ development // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0009611 // response to wounding // traceable author statement /// 0019695 // choline metabolic process // not recorded /// 0031623 // receptor internalization // inferred from electronic annotation /// 0032223 // negative regulation of synaptic transmission, cholinergic // inferred by curator /// 0042135 // neurotransmitter catabolic process // inferred from electronic annotation /// 0042136 // neurotransmitter biosynthetic process // traceable author statement /// 0042982 // amyloid precursor protein metabolic process // traceable author statement /// 0045212 // neurotransmitter receptor biosynthetic process // inferred from electronic annotation /// 0048814 // regulation of dendrite morphogenesis // not recorded /// 0050714 // positive regulation of protein secretion // traceable author statement /// 0050770 // regulation of axonogenesis // not recorded /// 0051262 // protein tetramerization // inferred from electronic annotation /// 0060041 // retina development in camera-type eye // inferred from electronic annotation","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005605 // basal lamina // non-traceable author statement /// 0005605 // basal lamina // inferred from electronic annotation /// 0005615 // extracellular space // not recorded /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // not recorded /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // not recorded /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030424 // axon // not recorded /// 0030425 // dendrite // not recorded /// 0031225 // anchored to membrane // inferred from electronic annotation /// 0031594 // neuromuscular junction // not recorded /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0042734 // presynaptic membrane // not recorded /// 0043083 // synaptic cleft // non-traceable author statement /// 0045202 // synapse // inferred from direct assay /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // not recorded /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0001540 // beta-amyloid binding // traceable author statement /// 0003990 // acetylcholinesterase activity // inferred from direct assay /// 0003990 // acetylcholinesterase activity // inferred from mutant phenotype /// 0003990 // acetylcholinesterase activity // inferred from electronic annotation /// 0004091 // carboxylesterase activity // not recorded /// 0004091 // carboxylesterase activity // inferred from electronic annotation /// 0004104 // cholinesterase activity // inferred from direct assay /// 0004104 // cholinesterase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017171 // serine hydrolase activity // inferred from direct assay /// 0042166 // acetylcholine binding // inferred from direct assay /// 0042166 // acetylcholine binding // non-traceable author statement /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0042803 // protein homodimerization activity // non-traceable author statement /// 0043236 // laminin binding // inferred from direct assay /// 0043236 // laminin binding // inferred from electronic annotation /// 0043621 // protein self-association // inferred from electronic annotation","chr7:100487614-100493522 (-) // 91.21 // q22.1"]
["11722643_a_at",0.116607666,-0.031124115,-0.09560156,0.22510672,0.031124115,-0.13757372,0.9018768,0.7430398,-1.0302005,-0.04292512,1.0302005,"down","BRPF1",7862,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0070776 // MOZ/MORF histone acetyltransferase complex // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:9773431-9789685 (+) // 96.63 // p25.3"]
["11723893_s_at",-0.10259247,-0.09533024,0.06868172,0.39892864,0.38292313,-0.06868172,0.45925263,0.1603456,-1.2148714,-0.28080362,1.2148714,"down","CREBBP",1387,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001666 // response to hypoxia // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006461 // protein complex assembly // traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008589 // regulation of smoothened signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016573 // histone acetylation // inferred from direct assay /// 0016573 // histone acetylation // inferred from electronic annotation /// 0018076 // N-terminal peptidyl-lysine acetylation // inferred from direct assay /// 0030718 // germ-line stem cell maintenance // inferred from electronic annotation /// 0033261 // regulation of S phase // inferred from electronic annotation /// 0042592 // homeostatic process // non-traceable author statement /// 0042733 // embryonic digit morphogenesis // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0000123 // histone acetyltransferase complex // inferred from electronic annotation /// 0000790 // nuclear chromatin // inferred from direct assay /// 0000940 // condensed chromosome outer kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0016604 // nuclear body // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation","0000987 // core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0001085 // RNA polymerase II transcription factor binding // inferred from physical interaction /// 0001102 // RNA polymerase II activating transcription factor binding // traceable author statement /// 0001105 // RNA polymerase II transcription coactivator activity // traceable author statement /// 0001191 // RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0002039 // p53 binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003712 // transcription cofactor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from physical interaction /// 0003713 // transcription coactivator activity // traceable author statement /// 0004402 // histone acetyltransferase activity // inferred from direct assay /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016407 // acetyltransferase activity // inferred from direct assay /// 0016407 // acetyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0042975 // peroxisome proliferator activated receptor binding // inferred from electronic annotation /// 0043426 // MRF binding // inferred from direct assay /// 0046332 // SMAD binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:3774985-3930722 (-) // 93.09 // p13.3"]
["11756205_x_at",0.14201927,0.04389,0.16865063,-0.04389,-0.16088963,-0.19032764,0.13152175,0.013041675,1.1891156,0.24988902,1.1891156,"up","DCAF6",55827,"0016567 // protein ubiquitination // inferred by curator /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0080008 // CUL4-RING ubiquitin ligase complex // inferred from direct assay","0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from direct assay","chr1:167906055-168045072 (+) // 94.93 // q24.2"]
["11718044_s_at",-0.12826633,0.09493351,-0.09493351,-0.09997845,0.22716665,0.2071805,0.61039734,0.29030153,-1.1128134,-0.15421164,1.1128134,"down","RAB11B",9230,"0006184 // GTP catabolic process // inferred from direct assay /// 0006184 // GTP catabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0003924 // GTPase activity // traceable author statement /// 0005525 // GTP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from electronic annotation /// 0019003 // GDP binding // inferred from direct assay","chr19:8455081-8469318 (+) // 92.83 // p13.2"]
["11747683_a_at",-0.09232426,0.02199173,-0.05165577,-0.021991253,0.27669764,0.3812232,0.3885679,0.11410421,-1.1913847,-0.2526393,1.1913847,"down","ARHGAP27",201176,"0006897 // endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // inferred from sequence or structural similarity /// 0007165 // signal transduction // inferred from electronic annotation /// 0032855 // positive regulation of Rac GTPase activity // inferred from sequence or structural similarity /// 0043089 // positive regulation of Cdc42 GTPase activity // inferred from sequence or structural similarity /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from sequence or structural similarity /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from sequence or structural similarity /// 0030675 // Rac GTPase activator activity // inferred from sequence or structural similarity","chr17:43474753-43487765 (-) // 77.9 // q21.31"]
["11720562_a_at",0.01367569,0.047709942,0.026057243,-0.09123659,-0.013676167,-0.18884468,0.30283222,0.06965797,1.092071,0.12706673,1.092071,"up","PLXNA2",5362,"0001756 // somitogenesis // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0021915 // neural tube development // inferred from electronic annotation /// 0021935 // cerebellar granule cell precursor tangential migration // inferred from electronic annotation /// 0030334 // regulation of cell migration // inferred from sequence or structural similarity /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0051642 // centrosome localization // inferred from electronic annotation /// 0060037 // pharyngeal system development // inferred from electronic annotation /// 0060174 // limb bud formation // inferred from electronic annotation /// 0071526 // semaphorin-plexin signaling pathway // inferred from sequence or structural similarity /// 0071526 // semaphorin-plexin signaling pathway // inferred from electronic annotation","0002116 // semaphorin receptor complex // traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from sequence or structural similarity /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0017154 // semaphorin receptor activity // inferred from sequence or structural similarity /// 0017154 // semaphorin receptor activity // inferred from electronic annotation","chr1:208195589-208417729 (-) // 96.97 // q32.2"]
["11747424_x_at",0.005645752,0.02632904,-0.01785469,-0.005645752,-0.07676792,0.054865837,0.9035411,0.74666756,1.0096738,0.013889318,1.0096738,"up","RNPS1",10921,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from direct assay /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from mutant phenotype /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from electronic annotation /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // non-traceable author statement /// 0006351 // transcription, DNA-dependent // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // non-traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation /// 0035145 // exon-exon junction complex // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // non-traceable author statement /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr16:2303474-2318398 (-) // 92.25 // p13.3"]
["11727546_at",-0.06519604,0.20364523,0.17093039,-0.35015154,-0.16848707,0.06519604,0.4568376,0.1588365,1.1927354,0.25427407,1.1927354,"up","PANK3",79646,"0015937 // coenzyme A biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004594 // pantothenate kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr5:167982377-168006610 (-) // 88.16 // q34"]
["11737775_a_at",-0.021170616,-0.1648264,-0.0866518,0.35586452,0.021170616,0.04251194,0.39389762,0.117296085,-1.1734302,-0.23073202,1.1734302,"down","NOP2",4839,"0006364 // rRNA processing // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0032259 // methylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005730 // nucleolus // traceable author statement","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008757 // S-adenosylmethionine-dependent methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr12:6666036-6677480 (-) // 98.7 // p13.31"]
["11719812_a_at",-0.11603403,0.1830144,0.08320093,-0.024603367,0.024603367,-0.06509495,0.75603455,0.47740608,1.0509971,0.07175874,1.0509971,"up","SLC48A1",55652,"0006810 // transport // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:48166965-48176768 (+) // 82.81 // q13.11"]
["11749451_a_at",-0.15181446,-0.076660156,-0.058384895,0.30995655,0.08945179,0.058384895,0.23538601,0.04204213,-1.1877388,-0.24821757,1.1877388,"down","DERA",51071,"0009264 // deoxyribonucleotide catabolic process // inferred from electronic annotation /// 0046121 // deoxyribonucleoside catabolic process // inferred from direct assay /// 0046386 // deoxyribose phosphate catabolic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004139 // deoxyribose-phosphate aldolase activity // inferred from direct assay /// 0004139 // deoxyribose-phosphate aldolase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation","chr12:16064296-16186270 (+) // 99.93 // p12.3"]
["11758526_s_at",-0.18510675,-0.0026109219,0.0026109219,-0.030744076,0.12812662,0.09249663,0.49285758,0.1855027,-1.0905042,-0.124995284,1.0905042,"down","RELN",5649,"0000904 // cell morphogenesis involved in differentiation // inferred from sequence or structural similarity /// 0000904 // cell morphogenesis involved in differentiation // inferred from electronic annotation /// 0001764 // neuron migration // inferred from sequence or structural similarity /// 0001764 // neuron migration // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // inferred from sequence or structural similarity /// 0007411 // axon guidance // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from sequence or structural similarity /// 0007417 // central nervous system development // inferred from electronic annotation /// 0007420 // brain development // inferred from sequence or structural similarity /// 0007420 // brain development // inferred from electronic annotation /// 0010001 // glial cell differentiation // inferred from sequence or structural similarity /// 0010001 // glial cell differentiation // inferred from electronic annotation /// 0010976 // positive regulation of neuron projection development // inferred from sequence or structural similarity /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // inferred from electronic annotation /// 0016358 // dendrite development // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from sequence or structural similarity /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0021511 // spinal cord patterning // inferred from sequence or structural similarity /// 0021511 // spinal cord patterning // inferred from electronic annotation /// 0021517 // ventral spinal cord development // inferred from electronic annotation /// 0021766 // hippocampus development // inferred from sequence or structural similarity /// 0021800 // cerebral cortex tangential migration // inferred from sequence or structural similarity /// 0021800 // cerebral cortex tangential migration // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0032008 // positive regulation of TOR signaling cascade // inferred from electronic annotation /// 0032793 // positive regulation of CREB transcription factor activity // inferred from sequence or structural similarity /// 0038026 // reelin-mediated signaling pathway // inferred from sequence or structural similarity /// 0038026 // reelin-mediated signaling pathway // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from sequence or structural similarity /// 0045860 // positive regulation of protein kinase activity // inferred from electronic annotation /// 0048265 // response to pain // inferred from sequence or structural similarity /// 0048265 // response to pain // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from sequence or structural similarity /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050795 // regulation of behavior // inferred from sequence or structural similarity /// 0050804 // regulation of synaptic transmission // inferred from sequence or structural similarity /// 0051057 // positive regulation of small GTPase mediated signal transduction // inferred from sequence or structural similarity /// 0051057 // positive regulation of small GTPase mediated signal transduction // inferred from electronic annotation /// 0051968 // positive regulation of synaptic transmission, glutamatergic // inferred from sequence or structural similarity /// 0061003 // positive regulation of dendritic spine morphogenesis // inferred from sequence or structural similarity /// 0061098 // positive regulation of protein tyrosine kinase activity // inferred from sequence or structural similarity /// 0090129 // positive regulation of synapse maturation // inferred from sequence or structural similarity /// 1900273 // positive regulation of long-term synaptic potentiation // inferred from sequence or structural similarity /// 2000310 // regulation of N-methyl-D-aspartate selective glutamate receptor activity // inferred from sequence or structural similarity /// 2000463 // positive regulation of excitatory postsynaptic membrane potential // inferred from sequence or structural similarity /// 2000969 // positive regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity // inferred from sequence or structural similarity","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from sequence or structural similarity /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation","0004712 // protein serine/threonine/tyrosine kinase activity // inferred from sequence or structural similarity /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070325 // lipoprotein particle receptor binding // inferred from sequence or structural similarity /// 0070325 // lipoprotein particle receptor binding // inferred from electronic annotation /// 0070326 // very-low-density lipoprotein particle receptor binding // inferred from sequence or structural similarity /// 0070326 // very-low-density lipoprotein particle receptor binding // inferred from electronic annotation","chr7:103112237-103112667 (-) // 96.62 // q22.1"]
["11741893_at",-0.12565756,0.06375599,-0.06375599,-0.26563406,0.1885643,0.3509102,0.788701,0.5276459,-1.0966978,-0.13316604,1.0966978,"down","DPH3P1",100132911,"","","0046872 // metal ion binding // inferred from electronic annotation","chr20:61476489-61477543 (+) // 73.06 // q13.33"]
["11740894_x_at",0.03503132,-0.10251284,0.011284113,-0.118315935,-0.011284113,0.120596886,0.9483422,0.8556296,-1.0109638,-0.015731335,1.0109638,"down","SPANXN2",494119,"","","","chrX:142795054-142804516 (-) // 99.21 // q27.3"]
["11734593_a_at",-0.05118251,-0.008064985,0.13174891,-0.049405813,0.05095291,0.008064985,0.90710735,0.75378907,1.0146366,0.020963158,1.0146366,"up","SLC10A7",84068,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0015293 // symporter activity // inferred from electronic annotation","chr4:147362816-147443123 (-) // 97.68 // q31.22"]
["11729522_at",0.0031647682,0.28479576,0.27553654,-0.5790224,-0.0031647682,-0.09219456,0.38128677,0.10984332,1.3311068,0.4126263,1.3311068,"up","CA5B",11238,"0006730 // one-carbon metabolic process // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement","0004089 // carbonate dehydratase activity // inferred from electronic annotation /// 0004089 // carbonate dehydratase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:15756392-15805747 (+) // 53.28 // p22.2"]
["11719138_at",0.042529106,-0.008341789,0.040546417,0.008341789,-0.11598873,-0.11760998,0.34530294,0.08995563,1.0717711,0.09999688,1.0717711,"up","C20orf72",92667,"","0005739 // mitochondrion // inferred from electronic annotation","","chr20:17949533-17971765 (+) // 95.97 // p11.23"]
["11730846_x_at",-0.31845903,-0.057674408,0.087664604,-0.124177456,0.05767393,0.0848403,0.766647,0.49306288,-1.0734601,-0.10226857,1.0734601,"down","PIK3R3",8503,"0007596 // blood coagulation // traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0031295 // T cell costimulation // traceable author statement /// 0036092 // phosphatidylinositol-3-phosphate biosynthetic process // traceable author statement /// 0043551 // regulation of phosphatidylinositol 3-kinase activity // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0005942 // phosphatidylinositol 3-kinase complex // inferred from electronic annotation","0016301 // kinase activity // inferred from electronic annotation /// 0016303 // 1-phosphatidylinositol-3-kinase activity // traceable author statement /// 0035014 // phosphatidylinositol 3-kinase regulator activity // inferred from electronic annotation /// 0046935 // 1-phosphatidylinositol-3-kinase regulator activity // inferred from electronic annotation","chr1:46505811-46598380 (-) // 99.53 // p34.1"]
["11724071_at",0.05829048,0.16237831,0.17821693,-0.17520142,-0.11445904,-0.05829048,0.10447716,0.007897919,1.1883383,0.24894558,1.1883383,"up","PHF10",55274,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0071564 // npBAF complex // inferred from sequence or structural similarity /// 0071564 // npBAF complex // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:170103997-170124151 (-) // 89.68 // q27"]
["11718409_a_at",-0.055532932,0.09799957,-0.0882349,0.007282734,-0.007282734,0.025084496,0.8844535,0.70550364,-1.0165052,-0.023617653,1.0165052,"down","STXBP2",6813,"0001909 // leukocyte mediated cytotoxicity // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0006904 // vesicle docking involved in exocytosis // inferred from electronic annotation /// 0010447 // response to acidity // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0043304 // regulation of mast cell degranulation // inferred from sequence or structural similarity /// 0043304 // regulation of mast cell degranulation // inferred from electronic annotation /// 0043312 // neutrophil degranulation // inferred from expression pattern","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030141 // secretory granule // inferred from electronic annotation /// 0031201 // SNARE complex // inferred from direct assay /// 0042581 // specific granule // inferred from direct assay /// 0042582 // azurophil granule // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0044194 // cytolytic granule // inferred from direct assay /// 0070820 // tertiary granule // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0017075 // syntaxin-1 binding // inferred from electronic annotation /// 0030348 // syntaxin-3 binding // inferred from physical interaction /// 0030348 // syntaxin-3 binding // inferred from electronic annotation","chr19:7701987-7712759 (+) // 98.27 // p13.2"]
["11723021_a_at",0.02550602,-0.009259224,-0.018574238,0.009259224,-0.022315979,0.030560493,0.91007966,0.762057,-1.0045925,-0.006610464,1.0045925,"down","BCKDHB",594,"0007584 // response to nutrient // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009083 // branched chain family amino acid catabolic process // inferred from mutant phenotype /// 0009083 // branched chain family amino acid catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from mutant phenotype /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0005947 // mitochondrial alpha-ketoglutarate dehydrogenase complex // inferred from mutant phenotype","0003824 // catalytic activity // inferred from electronic annotation /// 0003826 // alpha-ketoacid dehydrogenase activity // inferred from electronic annotation /// 0003863 // 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity // inferred from electronic annotation /// 0003863 // 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // traceable author statement /// 0032403 // protein complex binding // inferred from electronic annotation","chr6:80816326-81055987 (+) // 82.63 // q14.1"]
["11740962_a_at",-0.25795794,-0.24812698,-0.13711548,0.4657936,0.30117702,0.13711548,0.1003104,0.007320964,-1.4297493,-0.51576215,1.4297493,"down","UBA5",79876,"0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0071569 // protein ufmylation // inferred from direct assay /// 0071569 // protein ufmylation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016235 // aggresome // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048037 // cofactor binding // inferred from electronic annotation /// 0071566 // UFM1 activating enzyme activity // inferred from direct assay","chr3:132373289-132396943 (+) // 99.51 // q22.1"]
["11738837_x_at",-0.009524345,-0.014466286,-0.047481537,0.009524345,0.035602093,0.03916216,0.18725139,0.02655514,-1.0366437,-0.051920176,1.0366437,"down","NPAS1",4861,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007417 // central nervous system development // traceable author statement /// 0007610 // behavior // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0004871 // signal transducer activity // inferred from electronic annotation","chr19:47524153-47549016 (+) // 96.61 // q13.32"]
["11731242_a_at",-0.026658773,-0.096567154,0.029453516,0.31460142,-0.051251173,0.026658773,0.65191674,0.33594888,-1.0927225,-0.12792711,1.0927225,"down","LGSN",51557,"0006542 // glutamine biosynthetic process // inferred from electronic annotation /// 0006807 // nitrogen compound metabolic process // inferred from electronic annotation","","0003824 // catalytic activity // inferred from electronic annotation /// 0004356 // glutamate-ammonia ligase activity // inferred from electronic annotation","chr6:63985539-64029882 (-) // 83.2 // q12"]
["11722987_a_at",-0.24214697,0.017433167,-0.017433167,0.028318405,-0.15369987,0.13169336,0.7821597,0.51645184,-1.059086,-0.08281969,1.059086,"down","ZMYND15",84225,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007286 // spermatid development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:4643139-4649408 (+) // 93.48 // p13.2"]
["11727733_a_at",-0.33441377,-0.03578496,-0.048547268,0.22221136,0.062369823,0.03578496,0.35568163,0.09583494,-1.1862192,-0.24637064,1.1862192,"down","CCDC40",55036,"0060285 // ciliary cell motility // inferred from mutant phenotype /// 0060285 // ciliary cell motility // inferred from electronic annotation /// 0060286 // flagellar cell motility // inferred from mutant phenotype /// 0060286 // flagellar cell motility // inferred from electronic annotation /// 0060287 // epithelial cilium movement involved in determination of left/right asymmetry // inferred from mutant phenotype /// 0060287 // epithelial cilium movement involved in determination of left/right asymmetry // inferred from electronic annotation /// 0070286 // axonemal dynein complex assembly // inferred from mutant phenotype","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005929 // cilium // inferred from sequence or structural similarity /// 0005929 // cilium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","","chr17:78011918-78074412 (+) // 96.16 // q25.3"]
["11730194_a_at",-0.38927555,-0.022078514,0.022078037,-0.3617711,0.095817566,0.24572802,0.8368118,0.6128075,-1.0890098,-0.12301689,1.0890098,"down","SEC14L2",23541,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // inferred from electronic annotation /// 0045540 // regulation of cholesterol biosynthetic process // non-traceable author statement /// 0045542 // positive regulation of cholesterol biosynthetic process // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0005543 // phospholipid binding // non-traceable author statement /// 0008047 // enzyme activator activity // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0008431 // vitamin E binding // non-traceable author statement /// 0016765 // transferase activity, transferring alkyl or aryl (other than methyl) groups // inferred from electronic annotation","chr22:30792845-30821291 (+) // 89.61 // q12.2"]
["11736005_x_at",0.103024006,-0.09096813,-0.011150837,0.011150837,0.018585205,-0.03041315,0.997455,0.993218,1.0003656,0.0005273744,1.0003656,"up","PRH1 /// PRH2","5554 /// 5555","","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr12:11081834-11087444 (+) // 96.93 // p13.2"]
["11744286_s_at",0.024957657,-0.20964622,-0.24562931,0.45338154,0.029482841,-0.024957657,0.46331742,0.16286224,-1.2277994,-0.2960749,1.2277994,"down","CBS",875,"0000096 // sulfur amino acid metabolic process // traceable author statement /// 0001958 // endochondral ossification // inferred from electronic annotation /// 0001974 // blood vessel remodeling // inferred from electronic annotation /// 0006535 // cysteine biosynthetic process from serine // inferred from electronic annotation /// 0006563 // L-serine metabolic process // inferred from direct assay /// 0006565 // L-serine catabolic process // inferred from direct assay /// 0006801 // superoxide metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0019343 // cysteine biosynthetic process via cystathionine // inferred from electronic annotation /// 0019344 // cysteine biosynthetic process // inferred from electronic annotation /// 0019346 // transsulfuration // traceable author statement /// 0019346 // transsulfuration // inferred from electronic annotation /// 0019448 // L-cysteine catabolic process // inferred from direct assay /// 0021587 // cerebellum morphogenesis // inferred from electronic annotation /// 0030823 // regulation of cGMP metabolic process // inferred from electronic annotation /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0043418 // homocysteine catabolic process // inferred from direct assay /// 0043506 // regulation of JUN kinase activity // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0050667 // homocysteine metabolic process // inferred from direct assay /// 0050667 // homocysteine metabolic process // inferred from electronic annotation /// 0050880 // regulation of blood vessel size // inferred from electronic annotation /// 0051593 // response to folic acid // inferred from electronic annotation /// 0060135 // maternal process involved in female pregnancy // inferred from electronic annotation /// 0060351 // cartilage development involved in endochondral bone morphogenesis // inferred from electronic annotation /// 0070814 // hydrogen sulfide biosynthetic process // inferred from direct assay /// 0070814 // hydrogen sulfide biosynthetic process // inferred from sequence or structural similarity","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003824 // catalytic activity // inferred from electronic annotation /// 0004122 // cystathionine beta-synthase activity // inferred from direct assay /// 0004122 // cystathionine beta-synthase activity // traceable author statement /// 0004122 // cystathionine beta-synthase activity // inferred from electronic annotation /// 0004124 // cysteine synthase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0020037 // heme binding // inferred from direct assay /// 0020037 // heme binding // inferred from mutant phenotype /// 0030170 // pyridoxal phosphate binding // inferred from direct assay /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0072341 // modified amino acid binding // inferred from direct assay","chr21:44473300-44496055 (-) // 86.95 // q22.3"]
["11744386_a_at",-0.06364632,-0.030244827,-0.08905125,0.030244827,0.05368805,0.101361275,0.11842124,0.0104168495,-1.088805,-0.12274554,1.088805,"down","RHOT2",89941,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from mutant phenotype /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0019725 // cellular homeostasis // inferred from mutant phenotype /// 0019725 // cellular homeostasis // inferred from electronic annotation /// 0047497 // mitochondrion transport along microtubule // inferred from mutant phenotype /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031307 // integral to mitochondrial outer membrane // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr16:718108-724171 (+) // 91.88 // p13.3"]
["11715629_a_at",-0.13700676,-0.22053051,-0.20950699,0.31722927,0.2726984,0.13700676,0.05564275,0.0020085236,-1.3484726,-0.4313262,1.3484726,"down","LAPTM4A",9741,"0006810 // transport // inferred from electronic annotation","0005794 // Golgi apparatus // inferred from direct assay /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:20232411-20251789 (-) // 97.78 // p24.1"]
["11744494_x_at",-0.0010375977,0.0058403015,-0.06951904,0.10247421,-0.08320522,0.0010375977,0.8595531,0.6551133,-1.0198387,-0.028340977,1.0198387,"down","JTB",10899,"0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from mutant phenotype /// 0007067 // mitosis // inferred from electronic annotation /// 0033205 // cell cycle cytokinesis // inferred from mutant phenotype /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay","0019901 // protein kinase binding // inferred from direct assay","chr1:153946741-153950106 (-) // 89.02 // q21.3"]
["11731641_s_at",-0.17372036,-0.1494422,0.14944267,0.22812223,0.23316145,-0.17115498,0.7114923,0.41332668,-1.1131254,-0.15461618,1.1131254,"down","TRAPPC10",7109,"0006810 // transport // inferred from electronic annotation /// 0006814 // sodium ion transport // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0071436 // sodium ion export // traceable author statement","0005794 // Golgi apparatus // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0015081 // sodium ion transmembrane transporter activity // traceable author statement","chr21:45432205-45526434 (+) // 98.33 // q22.3"]
["11724294_at",-0.102303505,0.0010237694,0.08002901,-0.2057929,-0.0010237694,0.25939608,0.95505035,0.8731104,-1.0172048,-0.02461012,1.0172048,"down","HPCA",3208,"0048839 // inner ear development // inferred from electronic annotation","","0003779 // actin binding // inferred from direct assay /// 0005509 // calcium ion binding // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation","chr1:33341179-33360247 (+) // 84.77 // p35.1"]
["11721515_a_at",-0.08032131,0.01897335,-0.03172493,-0.01897335,0.066988945,0.08930111,0.45051363,0.15381686,-1.0546736,-0.07679652,1.0546736,"down","TM9SF1",10548,"0006886 // intracellular protein transport // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0000421 // autophagic vacuole membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0008565 // protein transporter activity // inferred from electronic annotation","chr14:24658353-24664882 (-) // 97.17 // q12"]
["11764238_at",-0.016633272,0.052707434,0.016633034,-0.2663076,-0.1320312,0.11862588,0.69337654,0.38821378,1.0798318,0.11080666,1.0798318,"up","","","","","","chr21:46224627-46225150 (-) // 88.19 // q22.3"]
["11745400_a_at",-0.009860039,-0.054534912,-0.123045444,0.009860039,0.13073969,0.1806283,0.25302082,0.048555207,-1.1247123,-0.16955607,1.1247123,"down","ARSE",415,"0001501 // skeletal system development // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation","0005794 // Golgi apparatus // inferred from electronic annotation /// 0005795 // Golgi stack // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004065 // arylsulfatase activity // traceable author statement /// 0008484 // sulfuric ester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:2852698-2886286 (-) // 92.26 // p22.33"]
["11749571_a_at",0.12938309,0.019062996,0.015580177,-0.07488537,-0.019537926,-0.015580177,0.35456848,0.09521199,1.0653616,0.09134321,1.0653616,"up","ZNF692",55657,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:249144480-249153284 (-) // 96.55 // q44"]
["11763551_x_at",-0.5838852,0.0045056343,-0.0045056343,-0.7277317,0.16387033,0.08489752,0.9732523,0.9241513,-1.0245382,-0.03497372,1.0245382,"down","IGLJ3",28831,"","","","chr22:23063147-23243212 (+) // 94.46 // q11.22"]
["11715738_s_at",0.13073635,0.052309036,0.048174858,-0.048174858,-0.110183716,-0.1817894,0.14302972,0.015477882,1.1411244,0.19045603,1.1411244,"up","SNX3",8724,"0006810 // transport // inferred from electronic annotation /// 0006897 // endocytosis // traceable author statement /// 0007154 // cell communication // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005769 // early endosome // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from physical interaction /// 0032266 // phosphatidylinositol-3-phosphate binding // inferred from direct assay /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr6:108532420-108582478 (-) // 90.16 // q21"]
["11763749_x_at",-0.046120644,0.15062284,0.036355972,-0.036355972,-0.161201,0.2662382,0.95409673,0.8711069,1.0168163,0.024059003,1.0168163,"up","MLPH",79083,"0006605 // protein targeting // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0030318 // melanocyte differentiation // inferred from electronic annotation /// 0032400 // melanosome localization // inferred from electronic annotation /// 0043473 // pigmentation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0017022 // myosin binding // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0031489 // myosin V binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051010 // microtubule plus-end binding // inferred from electronic annotation","chr2:238395893-238462281 (+) // 97.24 // q37.3"]
["11733827_a_at",-0.12487507,-0.0581007,-0.143157,0.0581007,0.10857582,0.19571209,0.10837207,0.008631151,-1.1724343,-0.22950712,1.1724343,"down","C19orf48",84798,"","","","chr19:51300961-51308186 (-) // 98.45 // q13.33"]
["11726729_at",0.012394905,0.044071198,-0.005800247,0.0016465187,-0.0016469955,-0.053174973,0.51891714,0.20622735,1.0242826,0.034613773,1.0242826,"up","KDM4A",9682,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016577 // histone demethylation // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070544 // histone H3-K36 demethylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051864 // histone demethylase activity (H3-K36 specific) // inferred from direct assay","chr1:44115796-44171189 (+) // 96.97 // p34.1"]
["11760834_x_at",0.14319038,-0.03360939,-0.019704819,0.18323708,0.019704819,-0.08939457,0.978932,0.93936044,-1.0054842,-0.007890445,1.0054842,"down","MED6",10001,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016592 // mediator complex // inferred from direct assay /// 0016592 // mediator complex // inferred from mutant phenotype /// 0016592 // mediator complex // inferred from electronic annotation /// 0016592 // mediator complex // traceable author statement","0001104 // RNA polymerase II transcription cofactor activity // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0008134 // transcription factor binding // inferred from physical interaction","chr14:71059225-71067378 (-) // 81.99 // q24.2"]
["11718282_s_at",0.13281631,-0.024448395,-0.013191223,0.119605064,0.013191223,-0.029153824,0.9892214,0.9685436,-1.0019579,-0.0028218816,1.0019579,"down","NDUFV2",4729,"0006120 // mitochondrial electron transport, NADH to ubiquinone // inferred from mutant phenotype /// 0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007399 // nervous system development // inferred from mutant phenotype /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0048738 // cardiac muscle tissue development // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // inferred from mutant phenotype /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation","0003954 // NADH dehydrogenase activity // inferred from electronic annotation /// 0008137 // NADH dehydrogenase (ubiquinone) activity // inferred from mutant phenotype /// 0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement /// 0008137 // NADH dehydrogenase (ubiquinone) activity // inferred from electronic annotation /// 0009055 // electron carrier activity // non-traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation","chr18:9102627-9134343 (+) // 90.72 // p11.22"]
["11715981_a_at",0.3427906,0.03217697,-0.03217697,0.09198284,-0.064193726,-0.09181881,0.6659656,0.3529166,1.0985547,0.13560675,1.0985547,"up","VPS11",55823,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from direct assay /// 0030897 // HOPS complex // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:118938402-118952677 (+) // 97.4 // q23.3"]
["11721072_a_at",0.35055447,0.00182724,-0.00182724,0.15929604,-0.129179,-0.09836006,0.70263237,0.40009296,1.101599,0.13959913,1.101599,"up","SF3A1",10291,"0000389 // nuclear mRNA 3'-splice site recognition // traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006396 // RNA processing // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from mutant phenotype /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005684 // U2-type spliceosomal complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr22:30727934-30752928 (-) // 93.79 // q12.2"]
["11754052_a_at",0.008439064,-0.03248024,-0.053311348,-0.008439064,0.05794716,0.05776596,0.3592942,0.09768845,-1.0435808,-0.061542265,1.0435808,"down","NUP85",79902,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006935 // chemotaxis // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0010827 // regulation of glucose transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0030032 // lamellipodium assembly // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0048246 // macrophage chemotaxis // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031080 // nuclear pore outer ring // inferred from direct assay /// 0031080 // nuclear pore outer ring // non-traceable author statement /// 0031965 // nuclear membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr17:73201801-73231852 (+) // 96.06 // q25.1"]
["11742659_at",0.036668777,-0.14388561,0.112543106,-0.036668777,-0.041026115,0.13164854,0.9549399,0.87273717,-1.0112987,-0.016209116,1.0112987,"down","PRHOXNB",646625,"0006144 // purine base metabolic process // inferred from electronic annotation /// 0019428 // allantoin biosynthetic process // inferred from electronic annotation /// 0019628 // urate catabolic process // inferred from electronic annotation","0005777 // peroxisome // inferred from electronic annotation","0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from sequence or structural similarity /// 0016831 // carboxy-lyase activity // inferred from electronic annotation","chr13:28552242-28562774 (-) // 100.0 // q12.2"]
["11719040_s_at",-0.026077747,-0.26483965,0.026077747,0.1340828,-0.07826328,0.08896446,0.60409284,0.28387898,-1.0992665,-0.13654122,1.0992665,"down","CYGB",114757,"0006810 // transport // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from sequence or structural similarity /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0015671 // oxygen transport // non-traceable author statement /// 0015671 // oxygen transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0004601 // peroxidase activity // inferred from sequence or structural similarity /// 0004601 // peroxidase activity // inferred from electronic annotation /// 0005344 // oxygen transporter activity // non-traceable author statement /// 0005344 // oxygen transporter activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0019825 // oxygen binding // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:74523437-74533987 (-) // 87.52 // q25.1"]
["11735053_s_at",-0.049124002,0.14796543,-0.08369923,-0.07024884,0.11269927,0.049124002,0.9217488,0.7909307,-1.0178164,-0.025477378,1.0178164,"down","AKAP6",9472,"0006605 // protein targeting // non-traceable author statement /// 0010738 // regulation of protein kinase A signaling cascade // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032514 // positive regulation of protein phosphatase type 2B activity // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005640 // nuclear outer membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016529 // sarcoplasmic reticulum // inferred from direct assay /// 0016529 // sarcoplasmic reticulum // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0034704 // calcium channel complex // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0032947 // protein complex scaffold // inferred from electronic annotation /// 0034237 // protein kinase A regulatory subunit binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from electronic annotation /// 0051018 // protein kinase A binding // non-traceable author statement /// 0051018 // protein kinase A binding // traceable author statement","chr14:32798478-33302267 (+) // 94.16 // q12"]
["11723908_at",-0.051000595,0.051000595,-0.0940721,-0.31573892,0.098174095,0.122415066,0.99901557,0.99818635,1.000249,0.00035922704,1.000249,"up","KCNMA1",3778,"0001666 // response to hypoxia // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from direct assay /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006970 // response to osmotic stress // inferred from direct assay /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030007 // cellular potassium ion homeostasis // inferred from direct assay /// 0034465 // response to carbon monoxide // inferred from direct assay /// 0034465 // response to carbon monoxide // inferred from mutant phenotype /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0042391 // regulation of membrane potential // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0045794 // negative regulation of cell volume // inferred from direct assay /// 0051592 // response to calcium ion // inferred from direct assay /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0060073 // micturition // inferred from direct assay /// 0060083 // smooth muscle contraction involved in micturition // inferred from direct assay /// 0071805 // potassium ion transmembrane transport // not recorded /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005901 // caveola // inferred from direct assay /// 0008076 // voltage-gated potassium channel complex // inferred from direct assay /// 0008076 // voltage-gated potassium channel complex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from direct assay /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005249 // voltage-gated potassium channel activity // inferred from direct assay /// 0005249 // voltage-gated potassium channel activity // inferred from electronic annotation /// 0005267 // potassium channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015269 // calcium-activated potassium channel activity // inferred from direct assay /// 0015269 // calcium-activated potassium channel activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0060072 // large conductance calcium-activated potassium channel activity // inferred from direct assay /// 0060072 // large conductance calcium-activated potassium channel activity // inferred from mutant phenotype /// 0060072 // large conductance calcium-activated potassium channel activity // inferred from electronic annotation","chr10:78629363-79397577 (-) // 95.5 // q22.3"]
["11756406_x_at",-0.09623432,-0.0078077316,-0.062012672,0.20827866,0.19374943,0.0078077316,0.25893623,0.05070736,-1.1423173,-0.19196343,1.1423173,"down","ADM",133,"0001570 // vasculogenesis // inferred from direct assay /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001843 // neural tube closure // inferred from electronic annotation /// 0002026 // regulation of the force of heart contraction // inferred from electronic annotation /// 0002031 // G-protein coupled receptor internalization // inferred from direct assay /// 0006171 // cAMP biosynthetic process // inferred from direct assay /// 0006171 // cAMP biosynthetic process // traceable author statement /// 0006701 // progesterone biosynthetic process // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0007565 // female pregnancy // inferred from electronic annotation /// 0007565 // female pregnancy // traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0008015 // blood circulation // traceable author statement /// 0008209 // androgen metabolic process // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009409 // response to cold // inferred from electronic annotation /// 0009611 // response to wounding // inferred from electronic annotation /// 0009611 // response to wounding // traceable author statement /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010460 // positive regulation of heart rate // inferred from electronic annotation /// 0019933 // cAMP-mediated signaling // inferred from electronic annotation /// 0030819 // positive regulation of cAMP biosynthetic process // inferred from direct assay /// 0031100 // organ regeneration // inferred from electronic annotation /// 0031102 // neuron projection regeneration // inferred from electronic annotation /// 0031623 // receptor internalization // inferred from direct assay /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042594 // response to starvation // inferred from electronic annotation /// 0043116 // negative regulation of vascular permeability // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from electronic annotation /// 0045768 // positive regulation of anti-apoptosis // inferred from electronic annotation /// 0045906 // negative regulation of vasoconstriction // inferred from direct assay /// 0045909 // positive regulation of vasodilation // inferred from electronic annotation /// 0046879 // hormone secretion // inferred from electronic annotation /// 0048589 // developmental growth // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0055074 // calcium ion homeostasis // inferred from electronic annotation /// 0060670 // branching involved in labyrinthine layer morphogenesis // inferred from electronic annotation /// 0060712 // spongiotrophoblast layer development // inferred from electronic annotation /// 0097084 // vascular smooth muscle cell development // inferred from electronic annotation /// 2001214 // positive regulation of vasculogenesis // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005625 // soluble fraction // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay","0005102 // receptor binding // traceable author statement /// 0005179 // hormone activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031700 // adrenomedullin receptor binding // inferred from electronic annotation","chr11:10326630-10328947 (+) // 95.33 // p15.4"]
["11749814_s_at",0.24561977,0.02016735,0.10391712,-0.02016735,-0.14484215,-0.3032589,0.27266687,0.056476463,1.2136263,0.2793242,1.2136263,"up","NEK2",4751,"0000070 // mitotic sister chromatid segregation // inferred from electronic annotation /// 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from direct assay /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitosis // traceable author statement /// 0007067 // mitosis // inferred from electronic annotation /// 0007088 // regulation of mitosis // traceable author statement /// 0007126 // meiosis // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0043392 // negative regulation of DNA binding // inferred from electronic annotation /// 0046602 // regulation of mitotic centrosome separation // traceable author statement /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from mutant phenotype /// 0051225 // spindle assembly // traceable author statement /// 0051299 // centrosome separation // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation /// 0051988 // regulation of attachment of spindle microtubules to kinetochore // inferred from mutant phenotype","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0000794 // condensed nuclear chromosome // inferred from electronic annotation /// 0000922 // spindle pole // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // traceable author statement /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0030496 // midbody // inferred from electronic annotation /// 0043234 // protein complex // inferred from mutant phenotype","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:211836480-211848933 (-) // 99.82 // q32.3"]
["11759479_s_at",0.17583084,-0.10026455,-0.07810211,0.16099167,0.07810211,-0.08908653,0.87258327,0.68154943,-1.0358734,-0.050847713,1.0358734,"down","PTP4A2",8073,"0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004727 // prenylated protein tyrosine phosphatase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr1:32372023-32403955 (-) // 88.6 // p35.2"]
["11725393_s_at",-0.017204285,-0.12932873,0.00466156,0.11262894,0.1697464,-0.00466156,0.36662915,0.10149381,-1.1017995,-0.1398617,1.1017995,"down","MAK16",84549,"","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation","","chr8:33342267-33358780 (+) // 93.41 // p12"]
["11738008_s_at",0.21473885,-0.40596294,-0.03798294,0.23691177,0.03798294,-0.3093977,0.92548114,0.8008151,-1.0460134,-0.06490127,1.0460134,"down","APP",351,"0000085 // G2 phase of mitotic cell cycle // inferred from sequence or structural similarity /// 0000085 // G2 phase of mitotic cell cycle // inferred from electronic annotation /// 0001967 // suckling behavior // inferred from electronic annotation /// 0002576 // platelet degranulation // traceable author statement /// 0006378 // mRNA polyadenylation // inferred from sequence or structural similarity /// 0006378 // mRNA polyadenylation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from sequence or structural similarity /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006878 // cellular copper ion homeostasis // inferred from sequence or structural similarity /// 0006878 // cellular copper ion homeostasis // inferred from electronic annotation /// 0006897 // endocytosis // inferred from sequence or structural similarity /// 0006897 // endocytosis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007176 // regulation of epidermal growth factor-activated receptor activity // inferred from sequence or structural similarity /// 0007176 // regulation of epidermal growth factor-activated receptor activity // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from sequence or structural similarity /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0007617 // mating behavior // inferred from sequence or structural similarity /// 0007617 // mating behavior // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from sequence or structural similarity /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0008088 // axon cargo transport // inferred from sequence or structural similarity /// 0008088 // axon cargo transport // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from sequence or structural similarity /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0008542 // visual learning // inferred from sequence or structural similarity /// 0008542 // visual learning // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010952 // positive regulation of peptidase activity // inferred from electronic annotation /// 0016199 // axon midline choice point recognition // inferred from sequence or structural similarity /// 0016199 // axon midline choice point recognition // inferred from electronic annotation /// 0016322 // neuron remodeling // inferred from sequence or structural similarity /// 0016322 // neuron remodeling // inferred from electronic annotation /// 0016358 // dendrite development // inferred from sequence or structural similarity /// 0016358 // dendrite development // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030198 // extracellular matrix organization // inferred from sequence or structural similarity /// 0030900 // forebrain development // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0031175 // neuron projection development // inferred from electronic annotation /// 0035235 // ionotropic glutamate receptor signaling pathway // inferred from sequence or structural similarity /// 0035235 // ionotropic glutamate receptor signaling pathway // inferred from electronic annotation /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0040014 // regulation of multicellular organism growth // inferred from sequence or structural similarity /// 0040014 // regulation of multicellular organism growth // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045931 // positive regulation of mitotic cell cycle // inferred from sequence or structural similarity /// 0045931 // positive regulation of mitotic cell cycle // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048669 // collateral sprouting in absence of injury // inferred from sequence or structural similarity /// 0048669 // collateral sprouting in absence of injury // inferred from electronic annotation /// 0050803 // regulation of synapse structure and activity // inferred from sequence or structural similarity /// 0050803 // regulation of synapse structure and activity // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation /// 0051124 // synaptic growth at neuromuscular junction // inferred from electronic annotation /// 0051402 // neuron apoptotic process // inferred from mutant phenotype /// 0051563 // smooth endoplasmic reticulum calcium ion homeostasis // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // traceable author statement /// 0005905 // coated pit // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from sequence or structural similarity /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030424 // axon // inferred from sequence or structural similarity /// 0030424 // axon // inferred from electronic annotation /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0035253 // ciliary rootlet // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from direct assay /// 0043198 // dendritic shaft // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation /// 0045202 // synapse // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0051233 // spindle midzone // inferred from electronic annotation","0003677 // DNA binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from direct assay /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016504 // peptidase activator activity // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation /// 0033130 // acetylcholine receptor binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046914 // transition metal ion binding // inferred from electronic annotation /// 0051425 // PTB domain binding // inferred from physical interaction","chr21:27252864-27543138 (-) // 93.89 // q21.3"]
["11762742_at",-0.58486867,0.3551848,0.13512611,0,0,-0.073770046,0.99332654,0.98176336,-1.0048145,-0.0069291964,1.0048145,"down","","","","","","chr11:120361275-120361829 (+) // 3.84 // q23.3"]
["11723929_a_at",-0.25753498,0.06348324,0.13748598,-0.059174538,0.059174538,-0.20877743,0.90164757,0.7422013,1.0357941,0.0507373,1.0357941,"up","OGDHL",55753,"0006096 // glycolysis // inferred from electronic annotation /// 0006099 // tricarboxylic acid cycle // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0004591 // oxoglutarate dehydrogenase (succinyl-transferring) activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016624 // oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor // inferred from electronic annotation /// 0030976 // thiamine pyrophosphate binding // inferred from electronic annotation","chr10:50942686-50970425 (-) // 98.53 // q11.23"]
["11737032_x_at",0.06351948,0.055161715,0.12620091,-0.2261796,-0.173002,-0.055161953,0.13389556,0.013518315,1.1753376,0.23307516,1.1753376,"up","FBXL13",222235,"","","","chr7:102453307-102715015 (-) // 91.02 // q22.1"]
["11753745_x_at",0.14371967,0.14715767,0.061219215,-0.061219215,-0.0861187,-0.13695908,0.0764652,0.004088687,1.1583982,0.2121312,1.1583982,"up","CDKN2A",1029,"0000075 // cell cycle checkpoint // inferred from mutant phenotype /// 0000080 // G1 phase of mitotic cell cycle // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // inferred from direct assay /// 0000209 // protein polyubiquitination // inferred from direct assay /// 0000278 // mitotic cell cycle // traceable author statement /// 0001953 // negative regulation of cell-matrix adhesion // inferred from mutant phenotype /// 0006309 // apoptotic DNA fragmentation // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006364 // rRNA processing // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // inferred from mutant phenotype /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006917 // induction of apoptosis // inferred from mutant phenotype /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007050 // cell cycle arrest // inferred from mutant phenotype /// 0007265 // Ras protein signal transduction // inferred from expression pattern /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008637 // apoptotic mitochondrial changes // inferred from mutant phenotype /// 0010389 // regulation of G2/M transition of mitotic cell cycle // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0030889 // negative regulation of B cell proliferation // inferred from sequence or structural similarity /// 0031647 // regulation of protein stability // inferred from sequence or structural similarity /// 0031648 // protein destabilization // inferred from direct assay /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0033088 // negative regulation of immature T cell proliferation in thymus // inferred from sequence or structural similarity /// 0033235 // positive regulation of protein sumoylation // inferred from mutant phenotype /// 0034393 // positive regulation of smooth muscle cell apoptotic process // inferred from sequence or structural similarity /// 0035986 // senescence-associated heterochromatin focus assembly // inferred from mutant phenotype /// 0042326 // negative regulation of phosphorylation // inferred from direct assay /// 0043517 // positive regulation of DNA damage response, signal transduction by p53 class mediator // inferred from direct assay /// 0045736 // negative regulation of cyclin-dependent protein kinase activity // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0046825 // regulation of protein export from nucleus // inferred from mutant phenotype /// 0048103 // somatic stem cell division // inferred from sequence or structural similarity /// 0050821 // protein stabilization // inferred from direct assay /// 0051444 // negative regulation of ubiquitin-protein ligase activity // inferred from sequence or structural similarity /// 0070534 // protein K63-linked ubiquitination // inferred from direct assay /// 0071158 // positive regulation of cell cycle arrest // inferred from direct assay /// 0090398 // cellular senescence // inferred from mutant phenotype /// 0090399 // replicative senescence // inferred from mutant phenotype /// 2000111 // positive regulation of macrophage apoptotic process // inferred from sequence or structural similarity /// 2000774 // positive regulation of cellular senescence // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016604 // nuclear body // inferred from direct assay /// 0035985 // senescence-associated heterochromatin focus // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay","0002039 // p53 binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from electronic annotation /// 0004861 // cyclin-dependent protein kinase inhibitor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0051059 // NF-kappaB binding // inferred from direct assay /// 0055105 // ubiquitin-protein ligase inhibitor activity // inferred from sequence or structural similarity /// 0070215 // MDM2 binding // inferred from physical interaction","chr9:21971003-21994330 (-) // 98.75 // p21.3"]
["11755686_a_at",-0.034295082,0.011942863,0.15211773,-0.011942863,0.11988735,-0.15477943,0.8176392,0.577123,1.0416473,0.058866885,1.0416473,"up","CPOX",1371,"0006778 // porphyrin-containing compound metabolic process // traceable author statement /// 0006779 // porphyrin-containing compound biosynthetic process // inferred from electronic annotation /// 0006782 // protoporphyrinogen IX biosynthetic process // inferred from electronic annotation /// 0006783 // heme biosynthetic process // traceable author statement /// 0006783 // heme biosynthetic process // inferred from electronic annotation /// 0010035 // response to inorganic substance // inferred from electronic annotation /// 0010039 // response to iron ion // inferred from electronic annotation /// 0010288 // response to lead ion // inferred from electronic annotation /// 0017085 // response to insecticide // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046685 // response to arsenic-containing substance // inferred from electronic annotation /// 0051597 // response to methylmercury // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // traceable author statement /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation","0004109 // coproporphyrinogen oxidase activity // traceable author statement /// 0004109 // coproporphyrinogen oxidase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay","chr3:98298297-98301039 (-) // 97.88 // q11.2"]
["11760049_at",-0.13693047,-0.00034475327,-0.21199322,0.00034475327,0.0355978,0.1560173,0.32763523,0.08134164,-1.1332054,-0.1804094,1.1332054,"down","LINC00308",54143,"","","","chr21:23484089-23487433 (+) // 45.05 // q21.1"]
["11743408_x_at",0.0035715103,-0.17454433,0.13607407,0.16031837,-0.0035715103,-0.14682198,0.9683614,0.91158694,-1.0104103,-0.014941263,1.0104103,"down","RBM25",58517,"0000381 // regulation of alternative nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from direct assay /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr14:73525143-73588842 (+) // 92.57 // q24.2"]
["11737366_a_at",0.008340836,-0.008340836,-0.235466,0.019064903,0.0654223,-0.04254651,0.65191674,0.33593133,-1.0661932,-0.09246892,1.0661932,"down","LRRC66",339977,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr4:52859809-52883786 (-) // 99.71 // q12"]
["11762320_a_at",0.20182705,-0.06947136,-0.17573595,0.015878677,-0.015878677,0.20247889,0.8113348,0.5667351,-1.05845,-0.08195309,1.05845,"down","C9orf114",51490,"","","","chr9:131583936-131592090 (-) // 80.95 // q34.11"]
["11734211_at",0.014793634,-0.26390696,-0.014793634,-0.07524967,0.14651847,0.03217578,0.6419212,0.32467088,-1.0885823,-0.12245045,1.0885823,"down","TMPRSS11B",132724,"0006508 // proteolysis // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr4:69092378-69111438 (-) // 77.6 // q13.2"]
["11737576_at",0.33573818,-0.0828433,0.094240665,-0.055722713,-0.041609764,0.041609764,0.65839595,0.34336025,1.0975496,0.13428608,1.0975496,"up","NPHS1",4868,"0000165 // MAPK cascade // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007254 // JNK cascade // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007517 // muscle organ development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0007520 // myoblast fusion // inferred from electronic annotation /// 0007588 // excretion // traceable author statement /// 0032836 // glomerular basement membrane development // inferred from expression pattern /// 0044062 // regulation of excretion // inferred from electronic annotation /// 0072015 // glomerular visceral epithelial cell development // inferred from expression pattern","0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0036057 // slit diaphragm // inferred from sequence or structural similarity /// 0042995 // cell projection // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0030507 // spectrin binding // inferred from electronic annotation /// 0051393 // alpha-actinin binding // inferred from electronic annotation","chr19:36316273-36342739 (-) // 85.95 // q13.12"]
["11745924_at",0.3257866,-0.21448374,0.008364201,0.10958719,-0.008364201,-0.09471798,0.9396484,0.83292854,1.0264908,0.037720706,1.0264908,"up","ZEB1-AS1",220930,"","","","chr10:31605456-31608002 (-) // 91.9 // p11.22"]
["11748327_x_at",0.40257454,0.0061588287,-0.11366987,0.250844,-0.06290007,-0.0061588287,0.9449203,0.84696877,1.0265183,0.03775941,1.0265183,"up","ZNF138",7697,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:64254799-64292620 (+) // 99.63 // q11.21"]
["11739347_a_at",0.2499485,0.15343857,0.01597023,-0.01597023,-0.2842598,-0.20050192,0.23648363,0.042427734,1.2368722,0.30669644,1.2368722,"up","PIP4K2A",5305,"0016310 // phosphorylation // non-traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0035855 // megakaryocyte development // inferred from electronic annotation /// 0046488 // phosphatidylinositol metabolic process // inferred from electronic annotation /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016307 // phosphatidylinositol phosphate kinase activity // inferred from electronic annotation /// 0016308 // 1-phosphatidylinositol-4-phosphate 5-kinase activity // non-traceable author statement /// 0016309 // 1-phosphatidylinositol-5-phosphate 4-kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr10:22823784-23003484 (-) // 89.51 // p12.2"]
["11733303_at",0.16853762,0.005608082,0.50872374,-0.07676172,-0.005608082,-0.03819275,0.44256505,0.14798395,1.2039794,0.26781067,1.2039794,"up","ZNF790",388536,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:37307578-37341215 (-) // 82.83 // q13.12"]
["11717730_s_at",0.27493858,0.12607765,0.1358242,-0.12607765,-0.2752514,-0.36701584,0.09761259,0.006920524,1.3519686,0.4350617,1.3519686,"up","SQLE",6713,"0006695 // cholesterol biosynthetic process // traceable author statement /// 0006725 // cellular aromatic compound metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // non-traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // non-traceable author statement /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004497 // monooxygenase activity // inferred from electronic annotation /// 0004506 // squalene monooxygenase activity // non-traceable author statement /// 0004506 // squalene monooxygenase activity // traceable author statement /// 0004506 // squalene monooxygenase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation","chr8:126010716-126034525 (+) // 93.18 // q24.13"]
["11759157_at",-0.18342423,0.09628534,0.25599122,-0.08262348,0.030484438,-0.030484438,0.80861115,0.5613541,1.0598245,0.083825335,1.0598245,"up","HIST1H2BC /// HIST1H2BE /// HIST1H2BF /// HIST1H2BG /// HIST1H2BI","8339 /// 8343 /// 8344 /// 8346 /// 8347","0006334 // nucleosome assembly // non-traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation","0000786 // nucleosome // non-traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr6:26199716-26200972 (+) // 98.97 // p22.2"]
["11758393_s_at",0,-0.15262604,0.09677315,-0.044759274,0.15845442,0,0.8219589,0.58483136,-1.0399513,-0.056516003,1.0399513,"down","DNAJC30",84277,"0006457 // protein folding // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation","0031072 // heat shock protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr7:73095247-73095804 (-) // 99.46 // q11.23"]
["11728679_a_at",-0.2848873,0.042514324,0.3391075,-0.0711329,-0.042514324,0.2314713,0.99138886,0.97421116,-1.0048846,-0.007029834,1.0048846,"down","CD163",9332,"0006953 // acute-phase response // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005044 // scavenger receptor activity // non-traceable author statement /// 0005044 // scavenger receptor activity // inferred from electronic annotation /// 0005044 // scavenger receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr12:7623411-7656489 (-) // 96.16 // p13.31"]
["11716222_a_at",-0.22333193,-0.099817276,0.07384682,-0.029324532,0.029324532,0.119570255,0.59115297,0.2714313,-1.0889649,-0.122957505,1.0889649,"down","RNASE1",6035,"0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0004522 // pancreatic ribonuclease activity // inferred from electronic annotation /// 0004522 // pancreatic ribonuclease activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation","chr14:21269392-21270495 (-) // 88.5 // q11.2"]
["11716171_s_at",0.35528278,-0.016916275,-0.10207939,0.10684776,0.016916275,-0.099677086,0.86530393,0.66713977,1.0502504,0.070733346,1.0502504,"up","LMNB2",84823,"","0005634 // nucleus // inferred from electronic annotation /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005638 // lamin filament // inferred from electronic annotation /// 0005652 // nuclear lamina // non-traceable author statement /// 0005882 // intermediate filament // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation","chr19:2428163-2456994 (-) // 98.03 // p13.3"]
["11739656_at",-0.18907833,-0.0055303574,-0.2298584,0.02081728,0.025339127,0.0055303574,0.33268347,0.083679475,-1.1162947,-0.158718,1.1162947,"down","RPL28",6158,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr19:55897299-55899741 (+) // 88.3 // q13.42"]
["11715190_s_at",0.038894653,-0.038894653,0.05775118,0.044571638,-0.18299103,-0.071970224,0.6029868,0.28256577,1.0639131,0.089380324,1.0639131,"up","FAM221A",340277,"","","","chr7:23719748-23742268 (+) // 96.37 // p15.3"]
["11755011_x_at",0.315629,0.1131773,-0.012485504,0.012485504,-0.13222027,-0.23662663,0.3597715,0.097988985,1.1954558,0.25756076,1.1954558,"up","ZFP106",64397,"0008286 // insulin receptor signaling pathway // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0001515 // opioid peptide activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:42707336-42749765 (-) // 89.97 // q15.1"]
["11725946_a_at",0.5024018,0.016144276,0.082279205,-0.4604373,-0.13959026,-0.016144276,0.38963127,0.11474699,1.3247,0.40566567,1.3247,"up","MPP2",4355,"0007165 // signal transduction // traceable author statement","0005624 // membrane fraction // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay","0004385 // guanylate kinase activity // traceable author statement","chr17:41952727-41985194 (-) // 97.82 // q21.31"]
["11736458_x_at",-0.083646774,-0.13791418,0.10407686,-0.0066223145,0.0066223145,0.10240412,0.7141947,0.41648707,-1.0521177,-0.073296115,1.0521177,"down","KCNK6",9424,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // traceable author statement /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0008076 // voltage-gated potassium channel complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005242 // inward rectifier potassium channel activity // traceable author statement /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005267 // potassium channel activity // inferred from electronic annotation","chr19:38810468-38819553 (+) // 56.19 // q13.2"]
["11748774_x_at",-0.004058838,0.08269405,0.06384373,-0.011804581,-0.0040006638,0.0040011406,0.40988192,0.12675726,1.0362899,0.051427692,1.0362899,"up","CTSL2",1515,"0006508 // proteolysis // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0009267 // cellular response to starvation // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0010259 // multicellular organismal aging // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0021675 // nerve development // inferred from electronic annotation /// 0034698 // response to gonadotropin stimulus // inferred from electronic annotation /// 0046697 // decidualization // inferred from electronic annotation /// 0048102 // autophagic cell death // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0060008 // Sertoli cell differentiation // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005773 // vacuole // inferred from electronic annotation /// 0005902 // microvillus // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0030141 // secretory granule // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation","0004177 // aminopeptidase activity // inferred from electronic annotation /// 0004197 // cysteine-type endopeptidase activity // inferred from electronic annotation /// 0004197 // cysteine-type endopeptidase activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // traceable author statement /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030984 // kininogen binding // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation","chr9:99794398-99801406 (-) // 81.74 // q22.33"]
["11721376_at",0.010967255,-0.010967255,0.23629665,-0.16458797,-0.030982018,0.051138878,0.597522,0.27719843,1.0919518,0.12690924,1.0919518,"up","BCL2",596,"0000082 // G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 0000209 // protein polyubiquitination // inferred from direct assay /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001101 // response to acid // inferred from electronic annotation /// 0001503 // ossification // inferred from electronic annotation /// 0001541 // ovarian follicle development // inferred from electronic annotation /// 0001656 // metanephros development // inferred from electronic annotation /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0001658 // branching involved in ureteric bud morphogenesis // inferred from electronic annotation /// 0001662 // behavioral fear response // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001776 // leukocyte homeostasis // inferred from electronic annotation /// 0001782 // B cell homeostasis // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001836 // release of cytochrome c from mitochondria // inferred from sequence or structural similarity /// 0001836 // release of cytochrome c from mitochondria // non-traceable author statement /// 0001952 // regulation of cell-matrix adhesion // inferred from electronic annotation /// 0002260 // lymphocyte homeostasis // inferred from electronic annotation /// 0002320 // lymphoid progenitor cell differentiation // inferred from electronic annotation /// 0002326 // B cell lineage commitment // inferred from electronic annotation /// 0002360 // T cell lineage commitment // inferred from electronic annotation /// 0002520 // immune system development // inferred from electronic annotation /// 0003014 // renal system process // inferred from electronic annotation /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006582 // melanin metabolic process // inferred from electronic annotation /// 0006808 // regulation of nitrogen utilization // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from direct assay /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006959 // humoral immune response // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from mutant phenotype /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007015 // actin filament organization // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007565 // female pregnancy // non-traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0007569 // cell aging // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0008219 // cell death // inferred from direct assay /// 0008219 // cell death // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0009314 // response to radiation // non-traceable author statement /// 0009408 // response to heat // inferred from electronic annotation /// 0009605 // response to external stimulus // inferred from electronic annotation /// 0009636 // response to toxin // inferred from direct assay /// 0009636 // response to toxin // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010035 // response to inorganic substance // inferred from electronic annotation /// 0010039 // response to iron ion // inferred from direct assay /// 0010044 // response to aluminum ion // inferred from electronic annotation /// 0010224 // response to UV-B // inferred from electronic annotation /// 0010332 // response to gamma radiation // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010559 // regulation of glycoprotein biosynthetic process // inferred from electronic annotation /// 0014031 // mesenchymal cell development // inferred from electronic annotation /// 0014042 // positive regulation of neuron maturation // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014911 // positive regulation of smooth muscle cell migration // inferred from electronic annotation /// 0016049 // cell growth // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from electronic annotation /// 0018107 // peptidyl-threonine phosphorylation // inferred from electronic annotation /// 0021747 // cochlear nucleus development // inferred from electronic annotation /// 0022612 // gland morphogenesis // inferred from electronic annotation /// 0022898 // regulation of transmembrane transporter activity // inferred from direct assay /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0030183 // B cell differentiation // inferred from electronic annotation /// 0030217 // T cell differentiation // inferred from electronic annotation /// 0030279 // negative regulation of ossification // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from direct assay /// 0030308 // negative regulation of cell growth // inferred from electronic annotation /// 0030318 // melanocyte differentiation // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0030890 // positive regulation of B cell proliferation // inferred from mutant phenotype /// 0031000 // response to caffeine // inferred from electronic annotation /// 0031103 // axon regeneration // inferred from electronic annotation /// 0031647 // regulation of protein stability // inferred from electronic annotation /// 0032835 // glomerulus development // inferred from electronic annotation /// 0032848 // negative regulation of cellular pH reduction // inferred from direct assay /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0032880 // regulation of protein localization // inferred from electronic annotation /// 0033033 // negative regulation of myeloid cell apoptotic process // inferred from electronic annotation /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0033591 // response to L-ascorbic acid // inferred from electronic annotation /// 0033689 // negative regulation of osteoblast proliferation // inferred from electronic annotation /// 0034097 // response to cytokine stimulus // inferred from direct assay /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0034349 // glial cell apoptotic process // inferred from electronic annotation /// 0035094 // response to nicotine // inferred from direct assay /// 0035094 // response to nicotine // inferred from electronic annotation /// 0035265 // organ growth // inferred from electronic annotation /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0040007 // growth // inferred from electronic annotation /// 0040018 // positive regulation of multicellular organism growth // inferred from electronic annotation /// 0042100 // B cell proliferation // inferred from direct assay /// 0042221 // response to chemical stimulus // inferred from electronic annotation /// 0042493 // response to drug // inferred from direct assay /// 0042493 // response to drug // inferred from mutant phenotype /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043029 // T cell homeostasis // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043067 // regulation of programmed cell death // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // inferred from electronic annotation /// 0043375 // CD8-positive, alpha-beta T cell lineage commitment // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0043496 // regulation of protein homodimerization activity // inferred from direct assay /// 0043497 // regulation of protein heterodimerization activity // inferred from direct assay /// 0043524 // negative regulation of neuron apoptotic process // inferred from direct assay /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043583 // ear development // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045636 // positive regulation of melanocyte differentiation // inferred from electronic annotation /// 0045930 // negative regulation of mitotic cell cycle // inferred from electronic annotation /// 0046671 // negative regulation of retinal cell programmed cell death // inferred from electronic annotation /// 0046688 // response to copper ion // inferred from electronic annotation /// 0046902 // regulation of mitochondrial membrane permeability // inferred from sequence or structural similarity /// 0048041 // focal adhesion assembly // inferred from electronic annotation /// 0048066 // developmental pigmentation // inferred from electronic annotation /// 0048070 // regulation of developmental pigmentation // inferred from electronic annotation /// 0048087 // positive regulation of developmental pigmentation // inferred from electronic annotation /// 0048536 // spleen development // inferred from electronic annotation /// 0048538 // thymus development // inferred from electronic annotation /// 0048545 // response to steroid hormone stimulus // inferred from electronic annotation /// 0048546 // digestive tract morphogenesis // inferred from electronic annotation /// 0048589 // developmental growth // inferred from electronic annotation /// 0048599 // oocyte development // inferred from electronic annotation /// 0048709 // oligodendrocyte differentiation // inferred from electronic annotation /// 0048743 // positive regulation of skeletal muscle fiber development // inferred from electronic annotation /// 0048753 // pigment granule organization // inferred from electronic annotation /// 0048873 // homeostasis of number of cells within a tissue // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0050853 // B cell receptor signaling pathway // inferred from mutant phenotype /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051402 // neuron apoptotic process // traceable author statement /// 0051402 // neuron apoptotic process // inferred from electronic annotation /// 0051412 // response to corticosterone stimulus // inferred from electronic annotation /// 0051593 // response to folic acid // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from direct assay /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0051881 // regulation of mitochondrial membrane potential // inferred from sequence or structural similarity /// 0051902 // negative regulation of mitochondrial depolarization // traceable author statement /// 0051924 // regulation of calcium ion transport // inferred from direct assay /// 0070059 // intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from direct assay /// 0071310 // cellular response to organic substance // inferred from electronic annotation /// 0072593 // reactive oxygen species metabolic process // inferred from electronic annotation /// 2001234 // negative regulation of apoptotic signaling pathway // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation /// 0043209 // myelin sheath // inferred from electronic annotation /// 0046930 // pore complex // inferred from direct assay","0002020 // protease binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0015267 // channel activity // inferred from direct assay /// 0019903 // protein phosphatase binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0051400 // BH domain binding // inferred from electronic annotation /// 0051434 // BH3 domain binding // inferred from physical interaction /// 0051721 // protein phosphatase 2A binding // inferred from electronic annotation","chr18:60790581-60987019 (-) // 96.73 // q21.33"]
["11733258_a_at",0.10706091,-0.23627234,-0.0985589,0.26817465,0.0985589,-0.12969255,0.67714405,0.36692858,-1.113373,-0.15493706,1.113373,"down","TAOK3",51347,"0000165 // MAPK cascade // inferred from mutant phenotype /// 0006281 // DNA repair // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0031572 // G2/M transition DNA damage checkpoint // inferred from mutant phenotype /// 0032874 // positive regulation of stress-activated MAPK cascade // inferred from mutant phenotype /// 0043507 // positive regulation of JUN kinase activity // inferred from mutant phenotype /// 0046329 // negative regulation of JNK cascade // inferred from direct assay /// 0046330 // positive regulation of JNK cascade // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004860 // protein kinase inhibitor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr12:118587605-118810750 (-) // 95.99 // q24.23"]
["11749008_x_at",0.120688915,-0.06389165,0.02661848,-0.09433913,-0.02661872,0.06366134,0.79633486,0.54084814,1.0330456,0.046904005,1.0330456,"up","RIMS1",22999,"0006461 // protein complex assembly // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0006944 // cellular membrane fusion // non-traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // traceable author statement /// 0007601 // visual perception // inferred from electronic annotation /// 0014047 // glutamate secretion // traceable author statement /// 0016079 // synaptic vesicle exocytosis // traceable author statement /// 0017156 // calcium ion-dependent exocytosis // traceable author statement /// 0045055 // regulated secretory pathway // non-traceable author statement /// 0046903 // secretion // non-traceable author statement /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from sequence or structural similarity /// 0042734 // presynaptic membrane // non-traceable author statement /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005083 // small GTPase regulator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:72922595-73110829 (+) // 98.58 // q13"]
["11733563_a_at",0.049094677,0.14167404,0.056419373,-0.08626175,-0.06819677,-0.049094677,0.11006188,0.008932848,1.1097596,0.15024714,1.1097596,"up","KLHDC10",23008,"","","","chr7:129710343-129773593 (+) // 96.7 // q32.2"]
["11725099_at",-0.026714325,-0.18291855,-0.12829685,0.19732189,0.11406994,0.026714325,0.19376904,0.028526945,-1.169057,-0.22534528,1.169057,"down","ESF1",51575,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation","","chr20:13693972-13765647 (-) // 81.99 // p12.1"]
["11717806_a_at",0.36986446,0.10774565,-0.10774565,0.10947657,-0.31437874,-0.2838254,0.5294553,0.21447255,1.2194219,0.2861973,1.2194219,"up","KIAA0913",23053,"","","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:75545334-75561551 (+) // 97.8 // q22.2"]
["11731605_s_at",-0.00078487396,-0.003358841,0.19608974,0.040603638,0.00078487396,-0.112701416,0.6526911,0.3366985,1.0627137,0.087753035,1.0627137,"up","HSD17B12",51144,"0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006703 // estrogen biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0010811 // positive regulation of cell-substrate adhesion // inferred from electronic annotation /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0035338 // long-chain fatty-acyl-CoA biosynthetic process // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0001968 // fibronectin binding // inferred from electronic annotation /// 0004303 // estradiol 17-beta-dehydrogenase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation","chr11:43702142-43878165 (+) // 89.3 // p11.2"]
["11728861_a_at",-0.090209484,0.1784358,0.17929602,-0.20910406,0.090209484,-0.1415422,0.5584141,0.23965625,1.1297365,0.17598636,1.1297365,"up","DCAF17",80067,"0016567 // protein ubiquitination // inferred by curator /// 0016567 // protein ubiquitination // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0080008 // CUL4-RING ubiquitin ligase complex // inferred from direct assay","","chr2:172290760-172341360 (+) // 78.07 // q31.1"]
["11757078_s_at",-0.16293693,-0.10773802,0.2252531,-0.047996998,0.15736413,0.047996998,0.8531797,0.642836,-1.0479685,-0.06759536,1.0479685,"down","SLC9B1",150159,"0006810 // transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0015299 // solute:hydrogen antiporter activity // inferred from electronic annotation","chr22:16909497-16958634 (-) // 96.65 // q11.1"]
["11720567_a_at",-0.006670952,0.12082815,0.18165588,-0.1558423,-0.25504923,0.006670952,0.30046862,0.06867681,1.175557,0.23334451,1.175557,"up","PPFIA3",8541,"0007269 // neurotransmitter secretion // inferred from electronic annotation /// 0048172 // regulation of short-term neuronal synaptic plasticity // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr19:49622662-49654283 (+) // 98.42 // q13.33"]
["11761339_s_at",-0.2709713,0.02051258,-0.02051258,-0.29264832,0.162498,0.23246288,0.79863685,0.54454434,-1.0900754,-0.12442789,1.0900754,"down","FAM115C",285966,"","","","chr7:143411506-143425525 (+) // 88.21 // q35 /// chr7:143332288-143515506 (+) // 83.95 // q35 /// chr7:143336322-143519539 (-) // 83.14 // q35"]
["11725070_a_at",-0.0013065338,-0.0024499893,0.0128650665,0.0013065338,-0.13100243,0.056171417,0.8555188,0.64727765,1.0192757,0.027544284,1.0192757,"up","PHF17",79960,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // non-traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006950 // response to stress // non-traceable author statement /// 0030308 // negative regulation of cell growth // non-traceable author statement /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0043981 // histone H4-K5 acetylation // inferred from direct assay /// 0043982 // histone H4-K8 acetylation // inferred from direct assay /// 0043983 // histone H4-K12 acetylation // inferred from direct assay /// 0043984 // histone H4-K16 acetylation // inferred from direct assay","0000123 // histone acetyltransferase complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:129730778-129796379 (+) // 96.56 // q28.2"]
["11762246_at",0.02967143,0.0022258759,-0.09225178,-0.02967143,-0.0022258759,0.114234924,0.74144256,0.45481747,-1.0335183,-0.047563955,1.0335183,"down","","","0006096 // glycolysis // inferred from electronic annotation","","0016868 // intramolecular transferase activity, phosphotransferases // inferred from electronic annotation","chr3:9390070-9391131 (+) // 99.43 // p25.3"]
["11735348_a_at",0.07572794,-0.20001602,0.029680252,0.068754196,-0.05118704,-0.029680252,0.91758686,0.78203404,-1.0192431,-0.02749822,1.0192431,"down","ZNF642",339559,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:40943301-40962014 (+) // 94.35 // p34.2"]
["11721426_at",-0.28127146,-0.2549839,-0.37304926,0.36033154,0.27431393,0.2549839,0.024381101,0.00024123449,-1.5153433,-0.59964466,1.5153433,"down","FZD5",7855,"0000578 // embryonic axis specification // inferred from direct assay /// 0001525 // angiogenesis // not recorded /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001944 // vasculature development // inferred from electronic annotation /// 0006915 // apoptotic process // not recorded /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007409 // axonogenesis // not recorded /// 0007420 // brain development // not recorded /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008406 // gonad development // not recorded /// 0008595 // anterior/posterior axis specification, embryo // inferred from direct assay /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from sequence or structural similarity /// 0031076 // embryonic camera-type eye development // not recorded /// 0031076 // embryonic camera-type eye development // inferred from electronic annotation /// 0031077 // post-embryonic camera-type eye development // not recorded /// 0031077 // post-embryonic camera-type eye development // inferred from electronic annotation /// 0032729 // positive regulation of interferon-gamma production // inferred from mutant phenotype /// 0033077 // T cell differentiation in thymus // not recorded /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0043507 // positive regulation of JUN kinase activity // inferred from electronic annotation /// 0044332 // Wnt receptor signaling pathway involved in dorsal/ventral axis specification // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction /// 0048469 // cell maturation // inferred from electronic annotation /// 0060061 // Spemann organizer formation // inferred from direct assay /// 0060070 // canonical Wnt receptor signaling pathway // inferred from direct assay /// 0060070 // canonical Wnt receptor signaling pathway // inferred from mutant phenotype /// 0060070 // canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0060561 // apoptotic process involved in morphogenesis // inferred from electronic annotation /// 0060716 // labyrinthine layer blood vessel development // not recorded /// 0060716 // labyrinthine layer blood vessel development // inferred from electronic annotation /// 0071219 // cellular response to molecule of bacterial origin // inferred from direct assay","0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // not recorded /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042995 // cell projection // not recorded","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017147 // Wnt-protein binding // inferred from physical interaction /// 0017147 // Wnt-protein binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0030165 // PDZ domain binding // not recorded /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042813 // Wnt-activated receptor activity // not recorded /// 0042813 // Wnt-activated receptor activity // inferred by curator","chr2:208627309-208634287 (-) // 97.55 // q33.3"]
["11722542_a_at",0.2380495,-0.012880325,0.061136723,-0.41801167,-0.03873682,0.012880325,0.5002623,0.19122644,1.1837721,0.24339134,1.1837721,"up","HIVEP2",3097,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:143072611-143158186 (-) // 98.17 // q24.2"]
["11741697_a_at",0.042087555,0.051008224,0.04016018,-0.10998821,-0.052433014,-0.04016018,0.096768565,0.00679417,1.0806848,0.11194577,1.0806848,"up","ITPA",3704,"0006193 // ITP catabolic process // inferred from electronic annotation /// 0009117 // nucleotide metabolic process // inferred from electronic annotation /// 0051276 // chromosome organization // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0035870 // dITP diphosphatase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047429 // nucleoside-triphosphate diphosphatase activity // inferred from electronic annotation","chr20:3190055-3204504 (+) // 78.39 // p13"]
["11728125_a_at",-0.3175435,0.1196208,0.29145145,-0.32400084,-0.1196208,0.21007586,0.8680809,0.6717964,1.078499,0.109024785,1.078499,"up","GZMH",2999,"0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // non-traceable author statement /// 0006915 // apoptotic process // non-traceable author statement /// 0019835 // cytolysis // inferred from electronic annotation","0005737 // cytoplasm // non-traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // non-traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr14:25075688-25078940 (-) // 86.52 // q12"]
["11732445_a_at",0.16201258,0.310524,0.15130901,-0.15130854,-0.3214631,-0.33441162,0.07266164,0.0036599282,1.3918556,0.47700953,1.3918556,"up","RBPMS",11030,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006396 // RNA processing // traceable author statement /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0060391 // positive regulation of SMAD protein import into nucleus // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008143 // poly(A) RNA binding // inferred from direct assay","chr8:30241924-30430508 (+) // 83.01 // p12"]
["11759850_at",0.13748217,-0.18599701,-0.24247527,0.0073702335,0.05159092,-0.0073702335,0.69815123,0.3940572,-1.0823699,-0.114193656,1.0823699,"down","MYO3A",53904,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from mutant phenotype /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0050896 // response to stimulus // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016459 // myosin complex // inferred from electronic annotation /// 0030175 // filopodium // inferred from direct assay /// 0031941 // filamentous actin // inferred from direct assay","0000146 // microfilament motor activity // inferred from direct assay /// 0000146 // microfilament motor activity // inferred from mutant phenotype /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0030898 // actin-dependent ATPase activity // inferred from direct assay /// 0043531 // ADP binding // inferred from direct assay /// 0060002 // plus-end directed microfilament motor activity // inferred from direct assay","chr10:26223202-26312410 (+) // 97.45 // p12.1"]
["11738864_a_at",-0.00864172,0.00864172,0.07704401,-0.077988386,-0.12699318,0.38873816,0.9428117,0.8412035,-1.0249623,-0.035570852,1.0249623,"down","ABHD12B /// MIR4454","100616234 /// 145447","","","0016787 // hydrolase activity // inferred from electronic annotation","chr14:51338877-51371688 (+) // 81.71 // q22.1"]
["11758135_s_at",0.03479004,0.021647453,-0.021647453,0.14700413,-0.057821274,-0.12300205,0.924149,0.7968168,1.0159785,0.022869809,1.0159785,"up","C14orf2",9556,"","0005739 // mitochondrion // inferred from electronic annotation /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","","chr14:104378653-104381476 (-) // 64.54 // q32.33"]
["11759293_at",0.5370493,-0.02636385,0.026364326,0.19394112,-0.14758778,-0.102142334,0.7010846,0.39824083,1.1467993,0.19761296,1.1467993,"up","MLL",4297,"0006306 // DNA methylation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006461 // protein complex assembly // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0032411 // positive regulation of transporter activity // inferred from mutant phenotype /// 0035162 // embryonic hemopoiesis // traceable author statement /// 0035162 // embryonic hemopoiesis // inferred from electronic annotation /// 0043984 // histone H4-K16 acetylation // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051568 // histone H3-K4 methylation // inferred from direct assay /// 0051568 // histone H3-K4 methylation // inferred from mutant phenotype /// 0051568 // histone H3-K4 methylation // inferred from electronic annotation /// 0051569 // regulation of histone H3-K4 methylation // inferred from electronic annotation /// 0080182 // histone H3-K4 trimethylation // inferred from direct assay /// 2001040 // positive regulation of cellular response to drug // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0035097 // histone methyltransferase complex // inferred from direct assay /// 0035097 // histone methyltransferase complex // inferred from electronic annotation /// 0044428 // nuclear part // inferred from electronic annotation /// 0071339 // MLL1 complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003680 // AT DNA binding // non-traceable author statement /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from direct assay /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from mutant phenotype /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0045322 // unmethylated CpG binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070577 // histone acetyl-lysine binding // inferred from direct assay","chr11:118307204-118397546 (+) // 98.0 // q23.3"]
["11759162_x_at",-0.18824768,-0.007162571,0.43576765,0.007162571,-0.015523434,0.3150568,0.9726941,0.92261016,-1.0154455,-0.022112768,1.0154455,"down","KRTAP19-1",337882,"","0005882 // intermediate filament // inferred from electronic annotation","","chr21:31852018-31852697 (-) // 97.0 // q22.11"]
["11757683_a_at",-0.3388791,-0.16563034,0.022811413,-0.02281189,0.34195423,0.120287895,0.37852687,0.1081761,-1.2371691,-0.30704275,1.2371691,"down","IRF2BP2",359948,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0046872 // metal ion binding // inferred from electronic annotation","chr1:234740016-234740725 (-) // 99.02 // q42.3"]
["11746398_a_at",-0.010593414,-0.17960835,-0.23902893,0.03705311,0.010593414,0.0806427,0.28092143,0.059892368,-1.1374791,-0.18584,1.1374791,"down","PIGT",51604,"0006501 // C-terminal protein lipidation // traceable author statement /// 0006506 // GPI anchor biosynthetic process // inferred from electronic annotation /// 0016255 // attachment of GPI anchor to protein // traceable author statement /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051402 // neuron apoptotic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // non-traceable author statement /// 0042765 // GPI-anchor transamidase complex // traceable author statement /// 0042765 // GPI-anchor transamidase complex // inferred from electronic annotation","0003923 // GPI-anchor transamidase activity // traceable author statement /// 0003923 // GPI-anchor transamidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr20:44044780-44054881 (+) // 94.07 // q13.12"]
["11751936_a_at",0.008803844,0.056159496,-0.029428482,-0.0644927,0.015947342,-0.008803844,0.7154243,0.41812128,1.0216928,0.03096141,1.0216928,"up","CDK12",51755,"0006397 // mRNA processing // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from sequence or structural similarity /// 0008380 // RNA splicing // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0043405 // regulation of MAP kinase activity // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0070816 // phosphorylation of RNA polymerase II C-terminal domain // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016607 // nuclear speck // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0019908 // nuclear cyclin-dependent protein kinase holoenzyme complex // inferred from sequence or structural similarity /// 0019908 // nuclear cyclin-dependent protein kinase holoenzyme complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004693 // cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008353 // RNA polymerase II carboxy-terminal domain kinase activity // inferred from mutant phenotype /// 0008353 // RNA polymerase II carboxy-terminal domain kinase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0030332 // cyclin binding // inferred from electronic annotation","chr17:37617763-37687686 (+) // 97.45 // q12"]
["11761381_at",-0.16650248,0.11582899,-0.065414906,0.065414906,-0.14084435,0.17679429,0.8259343,0.59142214,-1.051526,-0.072484456,1.051526,"down","SORBS2",8470,"","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0030018 // Z disc // non-traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005200 // structural constituent of cytoskeleton // traceable author statement /// 0008093 // cytoskeletal adaptor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008307 // structural constituent of muscle // traceable author statement","chr4:186547819-186877488 (-) // 99.81 // q35.1"]
["11751961_s_at",0.03134346,-0.59996486,-0.10472107,0.65156126,0.18690443,-0.03134346,0.44610038,0.15065992,-1.4078448,-0.49348828,1.4078448,"down","MTR",4548,"0000096 // sulfur amino acid metabolic process // traceable author statement /// 0006479 // protein methylation // inferred from electronic annotation /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009086 // methionine biosynthetic process // inferred from electronic annotation /// 0032259 // methylation // traceable author statement /// 0032259 // methylation // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042558 // pteridine-containing compound metabolic process // inferred from electronic annotation /// 0044237 // cellular metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046653 // tetrahydrofolate metabolic process // inferred from electronic annotation /// 0050667 // homocysteine metabolic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005542 // folic acid binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008705 // methionine synthase activity // inferred from electronic annotation /// 0008898 // homocysteine S-methyltransferase activity // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0031419 // cobalamin binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:236958981-237061434 (+) // 99.81 // q43"]
["11723838_at",0.12595415,0.13724852,0.06633663,-0.06633663,-0.20640612,-0.24814606,0.108862296,0.008731904,1.2171239,0.283476,1.2171239,"up","GATA6",2627,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0003148 // outflow tract septum morphogenesis // inferred from mutant phenotype /// 0003309 // type B pancreatic cell differentiation // inferred from electronic annotation /// 0003310 // pancreatic A cell differentiation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006644 // phospholipid metabolic process // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007492 // endoderm development // inferred from electronic annotation /// 0007493 // endodermal cell fate determination // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008584 // male gonad development // inferred from expression pattern /// 0009636 // response to toxin // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0030513 // positive regulation of BMP signaling pathway // inferred from electronic annotation /// 0030855 // epithelial cell differentiation // inferred from electronic annotation /// 0031016 // pancreas development // inferred from electronic annotation /// 0032911 // negative regulation of transforming growth factor beta1 production // inferred from mutant phenotype /// 0032912 // negative regulation of transforming growth factor beta2 production // inferred from mutant phenotype /// 0035239 // tube morphogenesis // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042493 // response to drug // inferred from mutant phenotype /// 0042493 // response to drug // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048645 // organ formation // inferred from electronic annotation /// 0051145 // smooth muscle cell differentiation // inferred from mutant phenotype /// 0051591 // response to cAMP // inferred from electronic annotation /// 0051891 // positive regulation of cardioblast differentiation // inferred from electronic annotation /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0060045 // positive regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0060430 // lung saccule development // inferred from electronic annotation /// 0060486 // Clara cell differentiation // inferred from electronic annotation /// 0060510 // Type II pneumocyte differentiation // inferred from electronic annotation /// 0060575 // intestinal epithelial cell differentiation // inferred from direct assay /// 0060947 // cardiac vascular smooth muscle cell differentiation // inferred from mutant phenotype /// 0070848 // response to growth factor stimulus // inferred from direct assay /// 0071158 // positive regulation of cell cycle arrest // inferred from direct assay /// 0071371 // cellular response to gonadotropin stimulus // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from direct assay /// 0071773 // cellular response to BMP stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation","0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from mutant phenotype /// 0001103 // RNA polymerase II repressing transcription factor binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr18:19749403-19782491 (+) // 96.19 // q11.2"]
["11723398_at",-0.33513403,-0.03657055,0.03657055,-0.5081239,0.13418913,0.19630766,0.9444053,0.8452884,-1.0370622,-0.05250238,1.0370622,"down","NGFR",4804,"0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0009611 // response to wounding // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0016048 // detection of temperature stimulus // inferred from electronic annotation /// 0021675 // nerve development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0031293 // membrane protein intracellular domain proteolysis // traceable author statement /// 0040037 // negative regulation of fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0042488 // positive regulation of odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0043588 // skin development // inferred from electronic annotation /// 0045786 // negative regulation of cell cycle // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048146 // positive regulation of fibroblast proliferation // inferred from electronic annotation /// 0048635 // negative regulation of muscle organ development // inferred from electronic annotation /// 0050770 // regulation of axonogenesis // traceable author statement /// 0050771 // negative regulation of axonogenesis // traceable author statement /// 0050772 // positive regulation of axonogenesis // traceable author statement /// 0051799 // negative regulation of hair follicle development // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // traceable author statement /// 0004872 // receptor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0005035 // death receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0048406 // nerve growth factor binding // inferred from electronic annotation","chr17:47572654-47592381 (+) // 94.49 // q21.33"]
["11740779_at",-0.10540295,-0.042006493,0.05042839,-0.049458504,0.042006493,0.19699287,0.64113253,0.32392153,-1.068441,-0.09550729,1.068441,"down","KIAA1751",85452,"","","","chr1:1885740-1935276 (-) // 68.84 // p36.33"]
["11752365_at",-0.26449442,-0.06789684,0.05173731,0.009981155,0.06826019,-0.009981155,0.60843194,0.28857866,-1.0839549,-0.11630477,1.0839549,"down","LOC442459",442459,"0006303 // double-strand break repair via nonhomologous end joining // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005958 // DNA-dependent protein kinase-DNA ligase 4 complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0004003 // ATP-dependent DNA helicase activity // inferred from electronic annotation","chrX:98716599-99194841 (-) // 96.9 // q22.1"]
["11720761_a_at",0.14634466,-0.03413105,-0.011610031,0.011610031,0.049736023,-0.11623669,0.79119134,0.5315737,1.03658,0.051831417,1.03658,"up","FBXO3",26273,"0006508 // proteolysis // traceable author statement /// 0016567 // protein ubiquitination // traceable author statement /// 0016567 // protein ubiquitination // non-traceable author statement","0000151 // ubiquitin ligase complex // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // traceable author statement /// 0004842 // ubiquitin-protein ligase activity // non-traceable author statement","chr11:33762489-33796070 (-) // 95.12 // p13"]
["11741570_a_at",0.24770403,-0.10648012,0.01683569,0.24357891,-0.016835213,-0.10167456,0.9805126,0.94390184,1.0076516,0.01099686,1.0076516,"up","UBE2Q2",92912,"0016567 // protein ubiquitination // inferred from electronic annotation /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation","chr15:76136076-76193388 (+) // 97.51 // q24.2"]
["11754482_a_at",0.038122177,0.008672714,-0.023273468,-0.0972414,-0.008672714,0.01873684,0.70263237,0.40018356,1.0259067,0.036899507,1.0259067,"up","PSMB1",5689,"0000075 // cell cycle checkpoint // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from electronic annotation","0000502 // proteasome complex // traceable author statement /// 0000502 // proteasome complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005839 // proteasome core complex // inferred from electronic annotation","0004175 // endopeptidase activity // inferred from electronic annotation /// 0004298 // threonine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr6:170844207-170847665 (-) // 72.45 // q27"]
["11755868_x_at",-0.14496994,0.05980873,0.12592888,0.052924156,-0.053962708,-0.052924156,0.90063274,0.74043745,1.0221287,0.031576864,1.0221287,"up","CLCC1",23155,"0006821 // chloride transport // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005254 // chloride channel activity // inferred from electronic annotation","chr1:109472560-109506072 (-) // 73.61 // p13.3"]
["11734332_a_at",-0.2458601,-0.020876884,0.22767067,-0.084877014,0.020876884,0.10000706,0.95505035,0.8729749,-1.017497,-0.02502446,1.017497,"down","C12orf36",283422,"","","","chr12:13523714-13540101 (-) // 58.49 // p13.1"]
["11748087_a_at",-0.039152622,-0.16049337,-0.16646385,0.12270975,0.064098835,0.039152145,0.14121814,0.015032392,-1.1465957,-0.19735679,1.1465957,"down","C10orf2",56652,"0006260 // DNA replication // inferred from electronic annotation /// 0006264 // mitochondrial DNA replication // inferred from mutant phenotype /// 0006264 // mitochondrial DNA replication // non-traceable author statement /// 0006264 // mitochondrial DNA replication // inferred from electronic annotation /// 0006268 // DNA unwinding involved in replication // inferred from electronic annotation /// 0006390 // transcription from mitochondrial promoter // inferred from mutant phenotype /// 0008219 // cell death // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // inferred from electronic annotation /// 0034214 // protein hexamerization // inferred from direct assay /// 0051260 // protein homooligomerization // inferred from direct assay","0005739 // mitochondrion // inferred from mutant phenotype /// 0005739 // mitochondrion // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0042645 // mitochondrial nucleoid // inferred from direct assay /// 0042645 // mitochondrial nucleoid // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0002020 // protease binding // inferred from physical interaction /// 0003678 // DNA helicase activity // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from direct assay /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0043139 // 5'-3' DNA helicase activity // inferred from direct assay","chr10:102747782-102754157 (+) // 84.28 // q24.31"]
["11753354_a_at",-0.07008004,0.0700798,-0.25814366,-0.163275,0.12822008,0.07302809,0.76604056,0.49156806,-1.0708123,-0.09870567,1.0708123,"down","DAOA",267012,"0043085 // positive regulation of catalytic activity // inferred from direct assay /// 1900758 // negative regulation of D-amino-acid oxidase activity // inferred from direct assay","0005739 // mitochondrion // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0008047 // enzyme activator activity // inferred from direct assay /// 0019899 // enzyme binding // inferred from physical interaction","chr13:106119457-106143349 (+) // 48.41 // q33.2"]
["11762815_at",-0.025058746,-0.13264179,-0.0773015,0.111830235,0.025058746,0.2924533,0.2789986,0.059068263,-1.1659032,-0.22144802,1.1659032,"down","MFAP2",4237,"0030220 // platelet formation // inferred from electronic annotation","0001527 // microfibril // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation","0001968 // fibronectin binding // inferred from electronic annotation /// 0070051 // fibrinogen binding // inferred from electronic annotation","chr1:17302190-17304812 (-) // 90.53 // p36.13"]
["11752641_a_at",-0.024878025,0.085255146,-0.016231537,-0.257802,0.016231537,0.17751837,0.924228,0.79804456,1.0253141,0.03606593,1.0253141,"up","PTK7",5754,"0001736 // establishment of planar polarity // inferred from electronic annotation /// 0001843 // neural tube closure // inferred from electronic annotation /// 0003401 // axis elongation // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0010976 // positive regulation of neuron projection development // inferred from mutant phenotype /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // inferred from mutant phenotype /// 0031532 // actin cytoskeleton reorganization // inferred from mutant phenotype /// 0045198 // establishment of epithelial cell apical/basal polarity // inferred from electronic annotation /// 0060026 // convergent extension // inferred from electronic annotation /// 0060070 // canonical Wnt receptor signaling pathway // inferred from mutant phenotype /// 0060484 // lung-associated mesenchyme development // inferred from electronic annotation /// 0071300 // cellular response to retinoic acid // inferred from mutant phenotype /// 0090103 // cochlea morphogenesis // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0005911 // cell-cell junction // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr6:43044579-43109518 (+) // 99.71 // p21.1"]
["11759518_at",0.33418417,-0.1344471,-0.1300261,0.67627954,0.13002586,-0.32586098,0.8806532,0.69846886,-1.0995485,-0.13691118,1.0995485,"down","MACF1",23499,"0001707 // mesoderm formation // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from sequence or structural similarity /// 0006620 // posttranslational protein targeting to membrane // inferred from electronic annotation /// 0006928 // cellular component movement // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0010632 // regulation of epithelial cell migration // inferred from sequence or structural similarity /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from sequence or structural similarity /// 0032886 // regulation of microtubule-based process // inferred from mutant phenotype /// 0042060 // wound healing // inferred from sequence or structural similarity /// 0043001 // Golgi to plasma membrane protein transport // inferred from direct assay /// 0051893 // regulation of focal adhesion assembly // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005856 // cytoskeleton // non-traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from direct assay /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0003779 // actin binding // inferred from direct assay /// 0003779 // actin binding // inferred from electronic annotation /// 0005509 // calcium ion binding // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // non-traceable author statement /// 0008017 // microtubule binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051015 // actin filament binding // non-traceable author statement","chr1:39796809-39952810 (+) // 99.09 // p34.3"]
["11755358_a_at",-0.6506691,0.20515347,0.064866066,-0.24263954,-0.064866066,0.14402962,0.9311971,0.8136707,-1.051458,-0.07239123,1.051458,"down","CPSF1 /// MIR1234 /// MIR939","100126351 /// 100302196 /// 29894","0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006378 // mRNA polyadenylation // inferred from direct assay /// 0006379 // mRNA cleavage // inferred from direct assay /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005847 // mRNA cleavage and polyadenylation specificity factor complex // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr8:145625198-145634683 (-) // 62.4 // q24.3"]
["11761056_at",0.12530136,0.016955376,0.10500097,-0.12905455,-0.016955376,-0.06603336,0.19877264,0.030060362,1.1119565,0.15310031,1.1119565,"up","TPD52",7163,"0009653 // anatomical structure morphogenesis // traceable author statement /// 0030183 // B cell differentiation // inferred from expression pattern /// 0046903 // secretion // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay","chr8:80831095-80993010 (-) // 92.91 // q21.13"]
["11746141_x_at",0.13010836,0.03687048,-0.2014699,0.2546563,-0.03687048,-0.07955551,0.8862543,0.70997673,-1.0407141,-0.057573855,1.0407141,"down","ARHGEF26",26084,"0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation","0001726 // ruffle // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation","chr3:153943573-153975616 (+) // 89.81 // q25.2"]
["11738991_a_at",0.0029344559,-0.05299616,0.08442879,-0.0029349327,-0.23690128,0.26183128,0.9925424,0.9793124,1.0028627,0.004124091,1.0028627,"up","ATP6V0E2",155066,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0007035 // vacuolar acidification // inferred from sequence or structural similarity /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0016049 // cell growth // inferred from genetic interaction /// 0033572 // transferrin transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005773 // vacuole // inferred from sequence or structural similarity /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0033179 // proton-transporting V-type ATPase, V0 domain // inferred from electronic annotation","0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042625 // ATPase activity, coupled to transmembrane movement of ions // inferred from sequence or structural similarity","chr7:149570056-149578138 (+) // 96.41 // q36.1"]
["11748083_a_at",-0.19136572,0.011798859,-0.011798859,0.016882896,-0.061350822,0.5493312,0.63325363,0.31524864,-1.1745241,-0.23207627,1.1745241,"down","DNALI1",7802,"0006928 // cellular component movement // traceable author statement /// 0007338 // single fertilization // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005858 // axonemal dynein complex // traceable author statement /// 0005930 // axoneme // traceable author statement /// 0030286 // dynein complex // inferred from electronic annotation","0003774 // motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // traceable author statement","chr1:38022579-38031234 (+) // 99.92 // p34.3"]
["11762260_x_at",-0.06561661,-0.020029545,0.037674427,-0.1283493,0.11476135,0.020029545,0.936283,0.8249033,-1.0126516,-0.018137852,1.0126516,"down","MST1",4485,"","0005576 // extracellular region // inferred from electronic annotation","0004252 // serine-type endopeptidase activity // inferred from electronic annotation","chr1:16972097-16974136 (+) // 97.46 // p36.13 /// chr1:17086323-17088751 (-) // 94.43 // p36.13 /// chr3:49724056-49726106 (-) // 97.36 // p21.31"]
["11758368_s_at",0.22876263,0.003411293,-0.08508873,0.14941216,-0.003411293,-0.0077142715,0.9925424,0.97940063,1.002035,0.0029329325,1.002035,"up","SGTA",6449,"0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr19:2754794-2755771 (-) // 98.03 // p13.3"]
["11732776_a_at",-0.15478373,0.1421814,-0.15496588,0.049013138,0.3384266,-0.0490129,0.64827186,0.3314527,-1.124018,-0.16866508,1.124018,"down","DNMT3A",1788,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006306 // DNA methylation // inferred from direct assay /// 0006306 // DNA methylation // inferred from electronic annotation /// 0006346 // methylation-dependent chromatin silencing // inferred from electronic annotation /// 0006349 // regulation of gene expression by genetic imprinting // traceable author statement /// 0006349 // regulation of gene expression by genetic imprinting // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0043045 // DNA methylation involved in embryo development // inferred from electronic annotation /// 0043046 // DNA methylation involved in gamete generation // inferred from electronic annotation /// 0044027 // hypermethylation of CpG island // inferred from electronic annotation /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation /// 0090116 // C-5 methylation of cytosine // inferred from direct assay /// 0090116 // C-5 methylation of cytosine // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000791 // euchromatin // inferred from direct assay /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005720 // nuclear heterochromatin // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from direct assay","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003886 // DNA (cytosine-5-)-methyltransferase activity // inferred from direct assay /// 0003886 // DNA (cytosine-5-)-methyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:25504321-25565459 (-) // 75.0 // p23.3"]
["11741468_a_at",-0.087715626,0.10043478,-0.3124566,0.087715626,-0.11361551,0.32547998,0.6334819,0.3154136,-1.1485173,-0.19977252,1.1485173,"down","SOX6",55553,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007517 // muscle organ development // non-traceable author statement /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0016458 // gene silencing // inferred from electronic annotation /// 0021778 // oligodendrocyte cell fate specification // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0032332 // positive regulation of chondrocyte differentiation // inferred from direct assay /// 0032332 // positive regulation of chondrocyte differentiation // inferred from electronic annotation /// 0035051 // cardiac cell differentiation // inferred from electronic annotation /// 0042692 // muscle cell differentiation // inferred from electronic annotation /// 0045165 // cell fate commitment // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0048709 // oligodendrocyte differentiation // inferred from electronic annotation /// 0048821 // erythrocyte development // inferred from electronic annotation /// 0051216 // cartilage development // inferred from electronic annotation /// 0061036 // positive regulation of cartilage development // inferred from direct assay /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from direct assay /// 2000741 // positive regulation of mesenchymal stem cell differentiation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr11:15987994-16629310 (-) // 97.28 // p15.2"]
["11723934_a_at",-0.41090345,-0.046056747,0.18660355,-0.12980413,0.16617918,0.046056747,0.8176162,0.5770599,-1.0849257,-0.11759618,1.0849257,"down","PNMA3",29944,"0006915 // apoptotic process // non-traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:152224765-152228822 (+) // 70.29 // q28"]
["11740428_at",-0.002375126,-0.06338692,0.04557991,-0.26669836,0.002375126,0.031630993,0.78303725,0.5179824,1.0503256,0.07083668,1.0503256,"up","PSAPL1",768239,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation","","chr4:7432021-7436700 (-) // 89.78 // p16.1"]
["11718112_at",0.30654144,-0.02788353,-0.028047562,0.34104347,0.02788353,-0.05385399,0.96498895,0.90211934,-1.0150055,-0.0214875,1.0150055,"down","SF3A3",10946,"0000375 // RNA splicing, via transesterification reactions // traceable author statement /// 0000389 // nuclear mRNA 3'-splice site recognition // traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // inferred from mutant phenotype /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006397 // mRNA processing // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005681 // spliceosomal complex // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:38422646-38456593 (-) // 79.05 // p34.3"]
["11730907_a_at",0.20088434,0.110946655,0.29985237,-0.49962902,-0.110946655,-0.3071642,0.14120573,0.015021929,1.4238604,0.5098077,1.4238604,"up","ABCB1",5243,"0000086 // G2/M transition of mitotic cell cycle // inferred from direct assay /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0042493 // response to drug // traceable author statement /// 0055085 // transmembrane transport // not recorded /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0072089 // stem cell proliferation // inferred from mutant phenotype","0000139 // Golgi membrane // not recorded /// 0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // not recorded /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016324 // apical plasma membrane // not recorded /// 0046581 // intercellular canaliculus // not recorded","0000166 // nucleotide binding // inferred from electronic annotation /// 0005215 // transporter activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // traceable author statement /// 0008559 // xenobiotic-transporting ATPase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // not recorded /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // traceable author statement","chr7:87132339-87342727 (-) // 96.55 // q21.12"]
["11751992_x_at",-0.252923,-0.04364705,0.043646812,-0.04844284,0.3409071,0.1505661,0.48499188,0.1794652,-1.1744493,-0.23198447,1.1744493,"down","MOV10L1",54456,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007281 // germ cell development // inferred from expression pattern /// 0007283 // spermatogenesis // inferred from expression pattern","0005622 // intracellular // inferred by curator","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // traceable author statement /// 0003723 // RNA binding // traceable author statement /// 0004004 // ATP-dependent RNA helicase activity // non-traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr22:50528684-50599943 (+) // 99.84 // q13.33"]
["11732243_at",-0.021521091,0.32388306,-0.18115163,-0.062344074,0.02152133,0.20671225,0.97687525,0.9339792,-1.0103766,-0.014893093,1.0103766,"down","APOL6",80830,"0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // non-traceable author statement /// 0006869 // lipid transport // inferred from electronic annotation /// 0042157 // lipoprotein metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0005319 // lipid transporter activity // non-traceable author statement /// 0008289 // lipid binding // inferred from electronic annotation","chr22:36044416-36064407 (+) // 18.3 // q12.3"]
["11733650_s_at",0.07528257,-0.31914878,0.46785307,-0.12167883,-0.07528257,0.11586857,0.8776921,0.691813,1.0730321,0.10169329,1.0730321,"up","FAM228B",375190,"","","","chr2:24346114-24392507 (+) // 92.33 // p23.3"]
["11739937_a_at",0.13667631,0.29877615,0.21162987,-0.16917801,-0.13667631,-0.24588919,0.057221737,0.002170939,1.31915,0.39960858,1.31915,"up","DYRK3",8444,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030218 // erythrocyte differentiation // inferred from direct assay /// 0030218 // erythrocyte differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004712 // protein serine/threonine/tyrosine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:206808880-206826770 (+) // 97.62 // q32.1"]
["11763892_at",-0.11413288,-0.2723055,-0.1220274,0.15117836,0.3104148,0.11413336,0.11793129,0.010316451,-1.2846696,-0.36139742,1.2846696,"down","SNORD17",692086,"","","","chr20:17942857-17943589 (-) // 60.21 // p11.23"]
["11758455_s_at",0.13172913,0.08356333,0.25479555,-0.08356285,-0.21753216,-0.20760393,0.10555048,0.008117975,1.2537609,0.32626227,1.2537609,"up","THAP6",152815,"","0015630 // microtubule cytoskeleton // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:76453493-76453969 (+) // 99.79 // q21.1"]
["11730538_a_at",-0.16853857,0.15911818,0.010953426,-0.2707243,-0.010953426,0.15684032,0.9255079,0.80092645,1.0296282,0.04212341,1.0296282,"up","ZSCAN10",84891,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from sequence or structural similarity /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:3138894-3149295 (-) // 96.07 // p13.3"]
["11723327_x_at",0.07635403,0.08260584,0.0016860962,-0.09388447,-0.03183174,-0.0016860962,0.28883734,0.06297759,1.0688179,0.09601601,1.0688179,"up","CA9",768,"0002009 // morphogenesis of an epithelium // inferred from electronic annotation /// 0006730 // one-carbon metabolic process // inferred from electronic annotation /// 0046903 // secretion // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0031528 // microvillus membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0004089 // carbonate dehydratase activity // inferred from electronic annotation /// 0004089 // carbonate dehydratase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:35673852-35681156 (+) // 94.24 // p13.3"]
["11758803_at",0.06269908,-0.0682528,0.17270422,-0.06269932,0.07531619,-0.37993336,0.62522084,0.305389,1.1314366,0.17815572,1.1314366,"up","SSBP2",23635,"0006355 // regulation of transcription, DNA-dependent // non-traceable author statement","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // non-traceable author statement /// 0003697 // single-stranded DNA binding // inferred from electronic annotation","chr5:80714031-81047077 (-) // 90.3 // q14.1"]
["11721621_a_at",0.5720577,0.26867485,0.338984,-0.26867485,-0.4124875,-0.549232,0.06433106,0.0027823788,1.7451733,0.8033703,1.7451733,"up","KATNAL1",84056,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008568 // microtubule-severing ATPase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr13:30776629-30881653 (-) // 89.54 // q12.3"]
["11718885_a_at",0.06463051,0.101076126,0.098171234,-0.06463051,-0.17479849,-0.23391485,0.10786561,0.008511163,1.1857013,0.24574055,1.1857013,"up","ARL5A",26225,"0007264 // small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr2:152657492-152685043 (-) // 96.21 // q23.3"]
["11717993_at",0.07778931,0.07181454,0.11240482,-0.35565615,-0.071815014,-0.096468925,0.24567351,0.04601511,1.1991258,0.26198298,1.1991258,"up","CBX7",23492,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation","0000790 // nuclear chromatin // inferred from direct assay /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0031519 // PcG protein complex // inferred from direct assay /// 0035102 // PRC1 complex // inferred from sequence or structural similarity /// 0035102 // PRC1 complex // inferred from electronic annotation","0003727 // single-stranded RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0035064 // methylated histone residue binding // inferred from electronic annotation","chr22:39526776-39548554 (-) // 94.0 // q13.1"]
["11724774_a_at",0.3938656,0.18525887,0.035763264,-0.17209196,-0.035763264,-0.069784164,0.27182478,0.056092925,1.2290205,0.29750896,1.2290205,"up","GHDC",84514,"","0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation","","chr17:40340773-40346640 (-) // 83.8 // q21.2"]
["11737856_a_at",-0.23900509,-0.06677437,-0.041830063,0.041830063,0.13279009,0.33687687,0.2706214,0.055461086,-1.2195668,-0.28636882,1.2195668,"down","OPCML",4978,"0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0008038 // neuron recognition // traceable author statement /// 0038003 // opioid receptor signaling pathway // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation","0004985 // opioid receptor activity // traceable author statement","chr11:132284877-133402507 (-) // 95.91 // q25"]
["11749139_a_at",0.09006691,-0.019115925,0.091210365,-0.11137533,0.019115448,-0.13720226,0.3594018,0.097744,1.0947043,0.13054118,1.0947043,"up","SEMA3C",10512,"0001755 // neural crest cell migration // inferred from electronic annotation /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001974 // blood vessel remodeling // inferred from electronic annotation /// 0003151 // outflow tract morphogenesis // inferred from electronic annotation /// 0003215 // cardiac right ventricle morphogenesis // inferred from electronic annotation /// 0003350 // pulmonary myocardium development // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // inferred from sequence or structural similarity /// 0007411 // axon guidance // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042493 // response to drug // traceable author statement /// 0060174 // limb bud formation // inferred from electronic annotation /// 0060666 // dichotomous subdivision of terminal units involved in salivary gland branching // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0030215 // semaphorin receptor binding // inferred from electronic annotation","chr7:80374183-80551675 (-) // 99.71 // q21.11"]
["11739115_s_at",0.041941166,-0.042523384,-0.041941166,0.07489443,-0.13628769,0.050722122,0.96153915,0.890488,-1.0073866,-0.010617396,1.0073866,"down","TSPYL1",7259,"0006334 // nucleosome assembly // inferred from electronic annotation","0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","","chr6:116596020-116601280 (-) // 81.52 // q22.1"]
["11718395_s_at",-0.40195036,0.01443243,-0.021549225,-0.01443243,0.4180932,0.2958231,0.39339042,0.11681055,-1.2919202,-0.36951694,1.2919202,"down","JUN",3725,"0001525 // angiogenesis // inferred from electronic annotation /// 0001774 // microglial cell activation // inferred from electronic annotation /// 0001836 // release of cytochrome c from mitochondria // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0003151 // outflow tract morphogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0007184 // SMAD protein import into nucleus // inferred from direct assay /// 0007568 // aging // inferred from electronic annotation /// 0007612 // learning // inferred from electronic annotation /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0008063 // Toll signaling pathway // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009314 // response to radiation // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009987 // cellular process // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0030224 // monocyte differentiation // inferred from electronic annotation /// 0031103 // axon regeneration // inferred from electronic annotation /// 0031953 // negative regulation of protein autophosphorylation // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // inferred from direct assay /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035026 // leading edge cell differentiation // inferred from electronic annotation /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043392 // negative regulation of DNA binding // inferred from direct assay /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0043922 // negative regulation by host of viral transcription // inferred from direct assay /// 0043923 // positive regulation by host of viral transcription // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045657 // positive regulation of monocyte differentiation // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred by curator /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048146 // positive regulation of fibroblast proliferation // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement /// 0051365 // cellular response to potassium ion starvation // inferred from electronic annotation /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0051591 // response to cAMP // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0051899 // membrane depolarization // inferred from electronic annotation /// 0060395 // SMAD protein signal transduction // inferred from direct assay /// 0071277 // cellular response to calcium ion // inferred from electronic annotation","0000228 // nuclear chromosome // traceable author statement /// 0000790 // nuclear chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005719 // nuclear euchromatin // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from electronic annotation","0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0001102 // RNA polymerase II activating transcription factor binding // inferred from physical interaction /// 0001190 // RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription // inferred by curator /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred by curator /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0005100 // Rho GTPase activator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0035497 // cAMP response element binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation /// 0070412 // R-SMAD binding // inferred from physical interaction","chr1:59246365-59249997 (-) // 96.89 // p32.1"]
["11731882_a_at",0.09503913,-0.1978631,-0.1454761,-0.032853603,0.18027854,0.03285384,0.5836895,0.2639046,-1.1040914,-0.14285961,1.1040914,"down","ZNF540",163255,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:38089274-38104932 (+) // 73.73 // q13.12"]
["11721841_at",-0.36417055,-0.13917065,0.10403633,-0.10403633,0.22281456,0.13149118,0.5834724,0.26356956,-1.1619313,-0.21652474,1.1619313,"down","GLIPR1",11010,"0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:75874459-75895715 (+) // 91.08 // q21.2"]
["11747472_x_at",-0.025494576,-0.13790989,0.025494576,0.08747864,0.28782082,-0.029492378,0.5085464,0.1976016,-1.118247,-0.16123892,1.118247,"down","PARPBP",55010,"0006281 // DNA repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 2000042 // negative regulation of double-strand break repair via homologous recombination // inferred from mutant phenotype","0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr12:102513956-102590370 (+) // 100.0 // q23.2"]
["11756848_a_at",-0.17117834,-0.07076073,0.07076073,-0.37860727,0.19272041,0.43738794,0.8329995,0.6055655,-1.1025875,-0.1408931,1.1025875,"down","MCHR1",2847,"0006091 // generation of precursor metabolites and energy // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // traceable author statement /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // traceable author statement /// 0007218 // neuropeptide signaling pathway // traceable author statement /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007631 // feeding behavior // traceable author statement /// 0051928 // positive regulation of calcium ion transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031513 // nonmotile primary cilium // inferred from sequence or structural similarity /// 0031513 // nonmotile primary cilium // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0008188 // neuropeptide receptor activity // traceable author statement /// 0030273 // melanin-concentrating hormone receptor activity // inferred from electronic annotation /// 0042562 // hormone binding // inferred from electronic annotation","chr22:41076110-41078177 (+) // 100.0 // q13.2"]
["11752473_x_at",-0.01439476,-0.019501686,0.026120186,-0.044808865,0.01439476,0.05142641,0.91518354,0.775989,-1.0066737,-0.00959612,1.0066737,"down","MED24",9862,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016573 // histone acetylation // inferred from electronic annotation /// 0030518 // intracellular steroid hormone receptor signaling pathway // inferred from direct assay /// 0030521 // androgen receptor signaling pathway // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0051291 // protein heterooligomerization // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016592 // mediator complex // non-traceable author statement /// 0016592 // mediator complex // inferred from electronic annotation","0001104 // RNA polymerase II transcription cofactor activity // inferred from direct assay /// 0003712 // transcription cofactor activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // non-traceable author statement /// 0042809 // vitamin D receptor binding // non-traceable author statement /// 0046966 // thyroid hormone receptor binding // inferred from direct assay","chr17:38179384-38210661 (-) // 99.95 // q21.1"]
["11721248_s_at",0.51760316,0.3321395,-0.05394578,-0.17010283,-0.082482815,0.05394578,0.43044513,0.14021805,1.2583026,0.33147886,1.2583026,"up","GNG2",54331,"0006112 // energy reserve metabolic process // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007191 // adenylate cyclase-activating dopamine receptor signaling pathway // inferred from sequence or structural similarity /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0071377 // cellular response to glucagon stimulus // traceable author statement /// 0071380 // cellular response to prostaglandin E stimulus // inferred from sequence or structural similarity /// 0071870 // cellular response to catecholamine stimulus // inferred from sequence or structural similarity","0005624 // membrane fraction // inferred from sequence or structural similarity /// 0005834 // heterotrimeric G-protein complex // inferred from sequence or structural similarity /// 0005834 // heterotrimeric G-protein complex // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation","chr14:52326839-52436513 (+) // 96.5 // q22.1"]
["11757021_x_at",0.23192883,-0.06258392,-0.034453392,0.29202843,0.034453392,-0.055239677,0.91004217,0.76193655,-1.0320052,-0.045450225,1.0320052,"down","RPS24",6229,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000462 // maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) // not recorded /// 0006364 // rRNA processing // inferred from mutant phenotype /// 0006412 // translation // inferred by curator /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0034101 // erythrocyte homeostasis // inferred from mutant phenotype /// 0042274 // ribosomal small subunit biogenesis // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // not recorded /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from direct assay /// 0015935 // small ribosomal subunit // inferred from sequence or structural similarity /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0031369 // translation initiation factor binding // inferred from sequence or structural similarity","chr10:79795104-79800459 (+) // 100.0 // q22.3"]
["11761861_at",-0.22897816,0.24724674,0.2642188,-0.57389855,-0.042005062,0.042005062,0.6375377,0.31996274,1.2188004,0.2854619,1.2188004,"up","ABHD14A-ACY1",100526760,"0008152 // metabolic process // inferred from electronic annotation","","0016787 // hydrolase activity // inferred from electronic annotation","chr3:52009075-52020905 (+) // 85.34 // p21.2"]
["11724837_at",-0.30627775,-0.41516542,-0.23214912,0.29166222,0.23214912,0.3071537,0.031232014,0.0005047034,-1.5103182,-0.5948525,1.5103182,"down","NCEH1",57552,"0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006805 // xenobiotic metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004091 // carboxylesterase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017171 // serine hydrolase activity // inferred from electronic annotation /// 0042301 // phosphate ion binding // inferred from electronic annotation","chr3:172348038-172429008 (-) // 97.27 // q26.31"]
["11727007_at",0.36079836,0.11942434,0.2345171,-0.12497282,-0.27771616,-0.11942434,0.110441886,0.009001701,1.3307914,0.4122844,1.3307914,"up","SORT1",6272,"0001503 // ossification // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006895 // Golgi to endosome transport // inferred from direct assay /// 0006897 // endocytosis // inferred from direct assay /// 0006897 // endocytosis // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from mutant phenotype /// 0007218 // neuropeptide signaling pathway // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008333 // endosome to lysosome transport // inferred from direct assay /// 0008624 // induction of apoptosis by extracellular signals // inferred from mutant phenotype /// 0010468 // regulation of gene expression // inferred from mutant phenotype /// 0014902 // myotube differentiation // inferred from mutant phenotype /// 0014902 // myotube differentiation // inferred from electronic annotation /// 0016050 // vesicle organization // inferred from direct assay /// 0016050 // vesicle organization // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0032509 // endosome transport via multivesicular body sorting pathway // inferred from direct assay /// 0032868 // response to insulin stimulus // inferred from mutant phenotype /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0046323 // glucose import // inferred from mutant phenotype /// 0046323 // glucose import // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // inferred from direct assay /// 0048011 // nerve growth factor receptor signaling pathway // inferred from mutant phenotype /// 0048227 // plasma membrane to endosome transport // inferred from direct assay /// 0051005 // negative regulation of lipoprotein lipase activity // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // non-traceable author statement /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from direct assay /// 0005792 // microsome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // non-traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005905 // coated pit // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0030136 // clathrin-coated vesicle // inferred from direct assay /// 0030140 // trans-Golgi network transport vesicle // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0004872 // receptor activity // inferred from electronic annotation /// 0010465 // nerve growth factor receptor activity // inferred from direct assay /// 0019899 // enzyme binding // inferred from physical interaction /// 0030379 // neurotensin receptor activity, non-G-protein coupled // inferred from direct assay /// 0048406 // nerve growth factor binding // inferred from physical interaction","chr1:109852192-109940540 (-) // 97.22 // p13.3"]
["11751204_s_at",-0.088498116,0.15613294,-0.0015544891,0.11550164,-0.030296087,0.0015547276,0.97858536,0.9386629,-1.0047895,-0.0068932525,1.0047895,"down","GPM6A",2823,"0001764 // neuron migration // inferred from direct assay /// 0003407 // neural retina development // inferred from sequence or structural similarity /// 0007399 // nervous system development // inferred from electronic annotation /// 0007416 // synapse assembly // inferred from sequence or structural similarity /// 0048812 // neuron projection morphogenesis // inferred from sequence or structural similarity /// 0048863 // stem cell differentiation // inferred from direct assay /// 0051491 // positive regulation of filopodium assembly // inferred from sequence or structural similarity /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030175 // filopodium // inferred from sequence or structural similarity /// 0030175 // filopodium // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from sequence or structural similarity /// 0043025 // neuronal cell body // inferred from sequence or structural similarity /// 0043197 // dendritic spine // inferred from electronic annotation /// 0044295 // axonal growth cone // inferred from sequence or structural similarity","0005262 // calcium channel activity // inferred from electronic annotation","chr4:176555696-176708827 (-) // 88.95 // q34.2"]
["11725745_a_at",-0.0024402142,0.3253274,0.19364476,-0.121233225,-0.0024402142,0.0024399757,0.379687,0.10908267,1.1587653,0.2125884,1.1587653,"up","SORBS1",10580,"0006810 // transport // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0007160 // cell-matrix adhesion // traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0015758 // glucose transport // inferred from sequence or structural similarity /// 0032869 // cellular response to insulin stimulus // inferred from sequence or structural similarity /// 0043149 // stress fiber assembly // inferred from sequence or structural similarity /// 0045725 // positive regulation of glycogen biosynthetic process // inferred from sequence or structural similarity /// 0046326 // positive regulation of glucose import // inferred from sequence or structural similarity /// 0046889 // positive regulation of lipid biosynthetic process // inferred from sequence or structural similarity /// 0048041 // focal adhesion assembly // inferred from sequence or structural similarity /// 0090004 // positive regulation of establishment of protein localization in plasma membrane // inferred from sequence or structural similarity","0001725 // stress fiber // inferred from sequence or structural similarity /// 0001725 // stress fiber // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005899 // insulin receptor complex // inferred from direct assay /// 0005912 // adherens junction // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from sequence or structural similarity /// 0005913 // cell-cell adherens junction // traceable author statement /// 0005915 // zonula adherens // traceable author statement /// 0005924 // cell-substrate adherens junction // inferred from sequence or structural similarity /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045121 // membrane raft // inferred from sequence or structural similarity","0003779 // actin binding // traceable author statement /// 0005070 // SH3/SH2 adaptor activity // inferred by curator /// 0005070 // SH3/SH2 adaptor activity // inferred from sequence or structural similarity /// 0005158 // insulin receptor binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // traceable author statement /// 0019901 // protein kinase binding // inferred from electronic annotation","chr10:97071530-97321171 (-) // 98.14 // q24.1"]
["11746255_x_at",0.048164368,-0.026226044,-0.0054159164,0.056254387,0.0054159164,-0.012385368,0.8981903,0.73618925,-1.0075985,-0.010920907,1.0075985,"down","VPS29",51699,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004647 // phosphoserine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:110929431-110936823 (-) // 96.13 // q24.11"]
["11748015_x_at",0.06450939,-0.011511803,0.011511803,0.019469261,-0.13801861,-0.104413986,0.43713796,0.14438517,1.0686758,0.0958242,1.0686758,"up","VDAC3",7419,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006820 // anion transport // inferred from electronic annotation /// 0015853 // adenine transport // traceable author statement /// 0044070 // regulation of anion transport // traceable author statement /// 0044070 // regulation of anion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0046930 // pore complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0008308 // voltage-gated anion channel activity // traceable author statement /// 0008308 // voltage-gated anion channel activity // inferred from electronic annotation /// 0015288 // porin activity // inferred from electronic annotation","chr8:42249345-42263204 (+) // 93.12 // p11.21"]
["11732300_at",-0.027955532,0.112240314,0.0907259,0.027955055,-0.06112671,-0.10667515,0.4442512,0.14909105,1.075459,0.10495253,1.075459,"up","KIAA1715",80856,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007596 // blood coagulation // inferred from electronic annotation /// 0035115 // embryonic forelimb morphogenesis // inferred from electronic annotation /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0060173 // limb development // non-traceable author statement","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:176788482-176867073 (-) // 65.74 // q31.1"]
["11718940_a_at",-0.022089005,0.022088528,0.071038246,0.17502928,-0.056441784,-0.028904915,0.97924626,0.9401657,-1.0043172,-0.0062149456,1.0043172,"down","TNFAIP3",7128,"0001922 // B-1 B cell homeostasis // inferred from electronic annotation /// 0001922 // B-1 B cell homeostasis // inferred from sequence or structural similarity /// 0002237 // response to molecule of bacterial origin // inferred from direct assay /// 0002237 // response to molecule of bacterial origin // inferred from electronic annotation /// 0002634 // regulation of germinal center formation // inferred from electronic annotation /// 0002634 // regulation of germinal center formation // inferred from sequence or structural similarity /// 0006508 // proteolysis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from direct assay /// 0006916 // anti-apoptosis // non-traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016579 // protein deubiquitination // inferred from electronic annotation /// 0016579 // protein deubiquitination // traceable author statement /// 0031397 // negative regulation of protein ubiquitination // inferred from direct assay /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0032495 // response to muramyl dipeptide // inferred from electronic annotation /// 0032691 // negative regulation of interleukin-1 beta production // inferred from electronic annotation /// 0032703 // negative regulation of interleukin-2 production // inferred from mutant phenotype /// 0032715 // negative regulation of interleukin-6 production // inferred from electronic annotation /// 0032715 // negative regulation of interleukin-6 production // inferred from sequence or structural similarity /// 0032720 // negative regulation of tumor necrosis factor production // inferred from electronic annotation /// 0032720 // negative regulation of tumor necrosis factor production // inferred from sequence or structural similarity /// 0034136 // negative regulation of toll-like receptor 2 signaling pathway // non-traceable author statement /// 0034140 // negative regulation of toll-like receptor 3 signaling pathway // inferred from direct assay /// 0034144 // negative regulation of toll-like receptor 4 signaling pathway // non-traceable author statement /// 0034148 // negative regulation of toll-like receptor 5 signaling pathway // inferred from electronic annotation /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0043124 // negative regulation of I-kappaB kinase/NF-kappaB cascade // inferred from direct assay /// 0043124 // negative regulation of I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // non-traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045732 // positive regulation of protein catabolic process // inferred from direct assay /// 0045736 // negative regulation of cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0045779 // negative regulation of bone resorption // non-traceable author statement /// 0048662 // negative regulation of smooth muscle cell proliferation // inferred from direct assay /// 0050691 // regulation of defense response to virus by host // non-traceable author statement /// 0050728 // negative regulation of inflammatory response // inferred from electronic annotation /// 0050728 // negative regulation of inflammatory response // inferred from sequence or structural similarity /// 0050869 // negative regulation of B cell activation // inferred from electronic annotation /// 0050869 // negative regulation of B cell activation // inferred from sequence or structural similarity /// 0051259 // protein oligomerization // non-traceable author statement /// 0060548 // negative regulation of cell death // inferred from electronic annotation /// 0061043 // regulation of vascular wound healing // non-traceable author statement /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement /// 0070429 // negative regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway // inferred from electronic annotation /// 0070433 // negative regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway // inferred from electronic annotation /// 0070536 // protein K63-linked deubiquitination // inferred from direct assay /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay /// 0071222 // cellular response to lipopolysaccharide // inferred from direct assay /// 0072573 // tolerance induction to lipopolysaccharide // inferred from mutant phenotype /// 0090291 // negative regulation of osteoclast proliferation // non-traceable author statement /// 2000347 // positive regulation of hepatocyte proliferation // inferred from electronic annotation /// 2000349 // negative regulation of CD40 signaling pathway // inferred from mutant phenotype /// 2000352 // negative regulation of endothelial cell apoptotic process // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement","0002020 // protease binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004221 // ubiquitin thiolesterase activity // inferred from mutant phenotype /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0004843 // ubiquitin-specific protease activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019900 // kinase binding // inferred from electronic annotation /// 0043027 // cysteine-type endopeptidase inhibitor activity involved in apoptotic process // non-traceable author statement /// 0043130 // ubiquitin binding // inferred from physical interaction /// 0043621 // protein self-association // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:138188723-138204449 (+) // 97.13 // q23.3"]
["11720628_s_at",0.027936935,0.06700516,0.06491947,-0.11010647,-0.119895935,-0.027936935,0.12603335,0.011880087,1.1013454,0.13926701,1.1013454,"up","ATP6V1D",51382,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0033572 // transferrin transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016471 // vacuolar proton-transporting V-type ATPase complex // inferred from direct assay /// 0033178 // proton-transporting two-sector ATPase complex, catalytic domain // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation /// 0046961 // proton-transporting ATPase activity, rotational mechanism // inferred from electronic annotation","chr14:67778831-67826966 (-) // 91.66 // q23.3"]
["11746799_a_at",0.18588066,0.16017437,0.18853188,-0.1626339,-0.16017437,-0.21082687,0.014770908,4.583347e-5,1.2799381,0.35607404,1.2799381,"up","PTPLAD1",51495,"0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0007249 // I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0007249 // I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0007254 // JNK cascade // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0016601 // Rac protein signal transduction // non-traceable author statement /// 0043547 // positive regulation of GTPase activity // traceable author statement","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005096 // GTPase activator activity // traceable author statement /// 0016829 // lyase activity // inferred from electronic annotation","chr15:65822819-65868975 (+) // 99.92 // q22.31"]
["11758842_at",-0.015207291,-0.1306529,-0.3102789,0.19093227,0.15332031,0.015207291,0.2692345,0.05472991,-1.2073687,-0.27186635,1.2073687,"down","THBS1",7057,"0000187 // activation of MAPK activity // inferred from mutant phenotype /// 0001666 // response to hypoxia // non-traceable author statement /// 0001937 // negative regulation of endothelial cell proliferation // inferred from direct assay /// 0001937 // negative regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001953 // negative regulation of cell-matrix adhesion // inferred from direct assay /// 0002040 // sprouting angiogenesis // inferred from mutant phenotype /// 0002544 // chronic inflammatory response // inferred from expression pattern /// 0002576 // platelet degranulation // traceable author statement /// 0002581 // negative regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II // inferred from direct assay /// 0002605 // negative regulation of dendritic cell antigen processing and presentation // inferred from direct assay /// 0003417 // growth plate cartilage development // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // inferred from expression pattern /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007155 // cell adhesion // non-traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0009749 // response to glucose stimulus // inferred from direct assay /// 0010595 // positive regulation of endothelial cell migration // inferred from direct assay /// 0010596 // negative regulation of endothelial cell migration // inferred from direct assay /// 0010748 // negative regulation of plasma membrane long-chain fatty acid transport // inferred from direct assay /// 0010751 // negative regulation of nitric oxide mediated signal transduction // inferred from direct assay /// 0010754 // negative regulation of cGMP-mediated signaling // inferred from direct assay /// 0010757 // negative regulation of plasminogen activation // inferred from direct assay /// 0010759 // positive regulation of macrophage chemotaxis // inferred from sequence or structural similarity /// 0010763 // positive regulation of fibroblast migration // inferred from direct assay /// 0010811 // positive regulation of cell-substrate adhesion // inferred from electronic annotation /// 0016477 // cell migration // inferred from direct assay /// 0016525 // negative regulation of angiogenesis // inferred from direct assay /// 0016525 // negative regulation of angiogenesis // inferred from electronic annotation /// 0018149 // peptide cross-linking // inferred from direct assay /// 0030168 // platelet activation // traceable author statement /// 0030194 // positive regulation of blood coagulation // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0030511 // positive regulation of transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0032026 // response to magnesium ion // inferred from direct assay /// 0032570 // response to progesterone stimulus // traceable author statement /// 0032695 // negative regulation of interleukin-12 production // inferred from direct assay /// 0032914 // positive regulation of transforming growth factor beta1 production // inferred from sequence or structural similarity /// 0034605 // cellular response to heat // non-traceable author statement /// 0040037 // negative regulation of fibroblast growth factor receptor signaling pathway // inferred from direct assay /// 0042327 // positive regulation of phosphorylation // inferred from mutant phenotype /// 0042493 // response to drug // inferred from expression pattern /// 0042535 // positive regulation of tumor necrosis factor biosynthetic process // inferred from direct assay /// 0043032 // positive regulation of macrophage activation // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043536 // positive regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0043537 // negative regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0043652 // engulfment of apoptotic cell // inferred from direct assay /// 0045727 // positive regulation of translation // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype /// 0050921 // positive regulation of chemotaxis // inferred from direct assay /// 0051592 // response to calcium ion // inferred from direct assay /// 0051895 // negative regulation of focal adhesion assembly // traceable author statement /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from direct assay /// 0051918 // negative regulation of fibrinolysis // inferred from direct assay /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from direct assay","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005577 // fibrinogen complex // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0030141 // secretory granule // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0031012 // extracellular matrix // traceable author statement /// 0031091 // platelet alpha granule // inferred from direct assay /// 0031093 // platelet alpha granule lumen // traceable author statement","0001786 // phosphatidylserine binding // inferred from direct assay /// 0001948 // glycoprotein binding // non-traceable author statement /// 0001968 // fibronectin binding // inferred from direct assay /// 0005178 // integrin binding // inferred from mutant phenotype /// 0005509 // calcium ion binding // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from direct assay /// 0008201 // heparin binding // inferred from electronic annotation /// 0017134 // fibroblast growth factor binding // inferred from direct assay /// 0030169 // low-density lipoprotein particle binding // inferred from direct assay /// 0042802 // identical protein binding // non-traceable author statement /// 0043236 // laminin binding // inferred from direct assay /// 0043394 // proteoglycan binding // traceable author statement /// 0043499 // eukaryotic cell surface binding // inferred from direct assay /// 0050431 // transforming growth factor beta binding // inferred from sequence or structural similarity /// 0050431 // transforming growth factor beta binding // traceable author statement /// 0050840 // extracellular matrix binding // inferred from electronic annotation /// 0070051 // fibrinogen binding // inferred from direct assay /// 0070052 // collagen V binding // inferred from direct assay","chr15:39873133-39891116 (+) // 96.06 // q14"]
["11749988_x_at",0.26997566,-0.045212746,0.04640293,-0.00077676773,0.00077724457,-0.1067791,0.5973299,0.27683118,1.0912498,0.12598142,1.0912498,"up","AUH",549,"0006402 // mRNA catabolic process // inferred from direct assay /// 0006552 // leucine catabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009083 // branched chain family amino acid catabolic process // traceable author statement /// 0009083 // branched chain family amino acid catabolic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement","0003723 // RNA binding // inferred from electronic annotation /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004300 // enoyl-CoA hydratase activity // inferred from direct assay /// 0004300 // enoyl-CoA hydratase activity // inferred from electronic annotation /// 0004490 // methylglutaconyl-CoA hydratase activity // not recorded /// 0004490 // methylglutaconyl-CoA hydratase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation","chr9:94058302-94124177 (-) // 58.46 // q22.31"]
["11763356_at",-0.18134642,0.39265656,0.04564047,-0.048516035,-0.04564047,0.07485676,0.84136224,0.62034833,1.0659084,0.09208351,1.0659084,"up","LOC157503",157503,"","","","chr8:56449430-56454699 (+) // 97.0 // q12.1"]
["11741109_a_at",0.02325058,-0.02325058,0.17756033,-0.09352112,-0.024747372,0.05845833,0.66474134,0.35051638,1.0563761,0.079123564,1.0563761,"up","ZNF57",126295,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:2900895-2918467 (+) // 92.9 // p13.3"]
["11757962_s_at",-0.4979458,-0.20441055,-0.08770275,0.115507126,0.15025616,0.08770275,0.21893759,0.036588088,-1.3024023,-0.3811751,1.3024023,"down","SRSF3",6428,"0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043274 // phospholipase binding // inferred from electronic annotation","chr6:36570879-36571208 (+) // 99.7 // p21.31"]
["11733898_x_at",0.08978748,0.010554314,0.05105591,-0.010554314,-0.09271431,-0.17207527,0.26163843,0.05197007,1.1036228,0.14224716,1.1036228,"up","TROVE2",6738,"0006383 // transcription from RNA polymerase III promoter // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // traceable author statement","0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement","chr1:193028767-193055443 (+) // 97.73 // q31.2"]
["11743011_a_at",-0.3394351,0.07211113,0.19642258,-0.09942818,0.022197723,-0.022197723,0.98531336,0.9570105,1.0066129,0.009508987,1.0066129,"up","GPR137B",7107,"","0005624 // membrane fraction // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr1:236305709-236372207 (+) // 93.52 // q42.3"]
["11743232_a_at",0.04035139,0.10285902,-0.18619967,-0.12558842,-0.04035139,0.147336,0.9824861,0.94890666,-1.0056502,-0.008128519,1.0056502,"down","MLLT4",4301,"0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005911 // cell-cell junction // traceable author statement /// 0005912 // adherens junction // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation","0008022 // protein C-terminus binding // traceable author statement","chr6:168227670-168369878 (+) // 94.59 // q27"]
["11724548_a_at",-0.10243034,0.015152931,0.052754402,-0.015153408,0.05146599,-0.021748543,0.91335166,0.76986325,-1.0114061,-0.016362334,1.0114061,"down","RSBN1",54665,"","0005634 // nucleus // inferred from electronic annotation","","chr1:114304453-114355183 (-) // 98.0 // p13.2"]
["11754793_a_at",-0.041534424,-0.038025856,-0.043831825,0.061369896,0.038025856,0.09893417,0.074770756,0.003841618,-1.0771661,-0.10724071,1.0771661,"down","RRP12",23223,"","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","","chr10:99116114-99127133 (-) // 95.57 // q24.1"]
["11730233_s_at",-0.0047109127,-0.15342474,-0.01889348,0.15964556,0.18459678,0.0047109127,0.3157837,0.07570626,-1.1292207,-0.17532751,1.1292207,"down","CTNND2",1501,"0001763 // morphogenesis of a branching structure // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007158 // neuron cell-cell adhesion // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007612 // learning // inferred from electronic annotation /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005912 // adherens junction // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr5:10971955-11904155 (-) // 94.48 // p15.2"]
["11741482_a_at",0.10445547,0.058856964,-0.06413889,-0.13492107,-0.058856487,0.06185913,0.67940354,0.36964825,1.0548447,0.077030666,1.0548447,"up","CLCN5",1184,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // traceable author statement /// 0006821 // chloride transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0007588 // excretion // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005247 // voltage-gated chloride channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0015297 // antiporter activity // inferred from electronic annotation","chrX:49832214-49863892 (+) // 92.74 // p11.22"]
["11725236_at",0.07551241,-0.052638054,-0.019442558,0.3209672,-0.15901423,0.019442558,0.8833655,0.7038668,-1.0419754,-0.059321187,1.0419754,"down","ZBTB39",9880,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:57392616-57400301 (-) // 97.27 // q13.3"]
["11739287_at",-0.057171345,0.23058844,0.03988552,-0.2670617,0.005765438,-0.005765438,0.5821326,0.26223564,1.1173812,0.16012147,1.1173812,"up","MLL",4297,"0006306 // DNA methylation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006461 // protein complex assembly // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0032411 // positive regulation of transporter activity // inferred from mutant phenotype /// 0035162 // embryonic hemopoiesis // traceable author statement /// 0035162 // embryonic hemopoiesis // inferred from electronic annotation /// 0043984 // histone H4-K16 acetylation // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051568 // histone H3-K4 methylation // inferred from direct assay /// 0051568 // histone H3-K4 methylation // inferred from mutant phenotype /// 0051568 // histone H3-K4 methylation // inferred from electronic annotation /// 0051569 // regulation of histone H3-K4 methylation // inferred from electronic annotation /// 0080182 // histone H3-K4 trimethylation // inferred from direct assay /// 2001040 // positive regulation of cellular response to drug // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0035097 // histone methyltransferase complex // inferred from direct assay /// 0035097 // histone methyltransferase complex // inferred from electronic annotation /// 0044428 // nuclear part // inferred from electronic annotation /// 0071339 // MLL1 complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003680 // AT DNA binding // non-traceable author statement /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from direct assay /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from mutant phenotype /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0045322 // unmethylated CpG binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070577 // histone acetyl-lysine binding // inferred from direct assay","chr11:118307204-118397546 (+) // 98.0 // q23.3"]
["11741235_a_at",-0.045975685,-0.20744991,-0.20838451,0.15681744,0.09506512,0.045975685,0.14403883,0.01569424,-1.1918666,-0.25322282,1.1918666,"down","JKAMP",51528,"0006986 // response to unfolded protein // inferred from electronic annotation /// 0030433 // ER-associated protein catabolic process // inferred from direct assay","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr14:59951160-59972080 (+) // 94.32 // q23.1"]
["11744622_x_at",0.15987015,0.035305023,0.0054779053,-0.0054779053,-0.04020214,-0.11004639,0.3692517,0.10293279,1.0858262,0.118793145,1.0858262,"up","STK25",10494,"0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006979 // response to oxidative stress // traceable author statement /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0050772 // positive regulation of axonogenesis // inferred from electronic annotation /// 0051645 // Golgi localization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:242434433-242448107 (-) // 94.98 // q37.3"]
["11725049_s_at",0.2813692,-0.006474495,-0.23029995,0.47535324,-0.22013569,0.006474495,0.92077655,0.7888349,-1.0514394,-0.07236571,1.0514394,"down","ARHGDIA",396,"0006916 // anti-apoptosis // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0007162 // negative regulation of cell adhesion // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // inferred from electronic annotation /// 0007266 // Rho protein signal transduction // traceable author statement /// 0032880 // regulation of protein localization // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050770 // regulation of axonogenesis // traceable author statement /// 0050771 // negative regulation of axonogenesis // traceable author statement /// 0050772 // positive regulation of axonogenesis // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0001772 // immunological synapse // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement","0005094 // Rho GDP-dissociation inhibitor activity // inferred from electronic annotation /// 0005094 // Rho GDP-dissociation inhibitor activity // traceable author statement /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr17:79825597-79827833 (-) // 91.49 // q25.3"]
["11749229_a_at",0.34501076,0.0061330795,0.06326914,-0.19845343,-0.0061330795,-0.27609253,0.3385212,0.08655941,1.2297491,0.29836398,1.2297491,"up","SIRT5",23408,"0006342 // chromatin silencing // traceable author statement /// 0006471 // protein ADP-ribosylation // traceable author statement /// 0006476 // protein deacetylation // inferred from direct assay /// 0036047 // peptidyl-lysine demalonylation // inferred from direct assay /// 0036047 // peptidyl-lysine demalonylation // inferred from electronic annotation /// 0036049 // peptidyl-lysine desuccinylation // inferred from direct assay /// 0036049 // peptidyl-lysine desuccinylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from direct assay /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from direct assay /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0003950 // NAD+ ADP-ribosyltransferase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0036054 // protein-malonyllysine demalonylase activity // inferred from direct assay /// 0036054 // protein-malonyllysine demalonylase activity // inferred from electronic annotation /// 0036055 // protein-succinyllysine desuccinylase activity // inferred from direct assay /// 0036055 // protein-succinyllysine desuccinylase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070403 // NAD+ binding // inferred from direct assay /// 0070403 // NAD+ binding // inferred from electronic annotation","chr6:13579681-13612524 (+) // 94.81 // p23"]
["11742569_s_at",-0.09459734,-0.039443016,0.039443016,-0.077041626,0.1963079,0.081474066,0.6441054,0.32723778,-1.0706196,-0.098445944,1.0706196,"down","OR5M1 /// OR5M10","390167 /// 390168","0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:56380030-56380978 (-) // 100.0 // q12.1 /// chr11:56344249-56345197 (-) // 97.15 // q12.1"]
["11716998_a_at",0.10274172,-0.065610886,-0.20121145,0.0012331009,-0.0012331009,0.091516495,0.7106224,0.41170657,-1.060834,-0.08519898,1.060834,"down","RHBDD3",25807,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004252 // serine-type endopeptidase activity // inferred from electronic annotation","chr22:29655860-29663960 (-) // 91.71 // q12.2"]
["11736111_a_at",0.12934971,0.007414818,0.039794922,-0.007414818,-0.26877308,-0.32764482,0.2997975,0.06831098,1.1975873,0.26013076,1.1975873,"up","ARHGAP18",93663,"0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005096 // GTPase activator activity // inferred from electronic annotation","chr6:129897289-130031370 (-) // 94.65 // q22.33"]
["11724771_x_at",-0.24831867,-0.036744118,0.016165733,-0.016165733,0.057000637,0.20076942,0.47708505,0.17353553,-1.1251888,-0.17016713,1.1251888,"down","FCGR2A",2212,"","0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0019864 // IgG binding // inferred from electronic annotation","chr1:161475204-161489617 (+) // 73.63 // q23.3"]
["11724793_s_at",-0.112439156,0.026136398,-0.0092659,-0.15072823,0.0092659,0.05383587,0.9910751,0.9734386,-1.0018368,-0.002647478,1.0018368,"down","PGS1",9489,"0006655 // phosphatidylglycerol biosynthetic process // inferred from sequence or structural similarity /// 0006655 // phosphatidylglycerol biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0032049 // cardiolipin biosynthetic process // inferred from sequence or structural similarity /// 0046339 // diacylglycerol metabolic process // inferred from sequence or structural similarity","0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0008444 // CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity // inferred from sequence or structural similarity /// 0008444 // CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016780 // phosphotransferase activity, for other substituted phosphate groups // inferred from electronic annotation","chr17:76374698-76420739 (+) // 97.62 // q25.3"]
["11749615_x_at",0.045513153,-0.031093597,0.09739208,0.031093597,-0.24732018,-0.08258152,0.5103062,0.19897756,1.0995195,0.13687317,1.0995195,"up","UBE2I",7329,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006464 // cellular protein modification process // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0010469 // regulation of receptor activity // inferred from electronic annotation /// 0016567 // protein ubiquitination // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0016925 // protein sumoylation // inferred from direct assay /// 0016925 // protein sumoylation // inferred from electronic annotation /// 0033145 // positive regulation of intracellular steroid hormone receptor signaling pathway // inferred from electronic annotation /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0000795 // synaptonemal complex // traceable author statement /// 0001650 // fibrillar center // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016604 // nuclear body // inferred from electronic annotation /// 0016605 // PML body // inferred from direct assay /// 0030425 // dendrite // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // traceable author statement /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from physical interaction /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0019789 // SUMO ligase activity // inferred from direct assay /// 0019789 // SUMO ligase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0043398 // HLH domain binding // inferred from electronic annotation /// 0043425 // bHLH transcription factor binding // inferred from electronic annotation","chr16:1364031-1371295 (+) // 96.07 // p13.3"]
["11715771_a_at",-0.020085335,-0.1386385,-0.038161278,0.14918518,0.2382145,0.020085335,0.2606777,0.051413544,-1.1498588,-0.20145676,1.1498588,"down","LOC100506980 /// MRPL13","100506980 /// 28998","0006412 // translation // non-traceable author statement /// 0006412 // translation // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005761 // mitochondrial ribosome // inferred from direct assay /// 0005762 // mitochondrial large ribosomal subunit // inferred from direct assay /// 0005762 // mitochondrial large ribosomal subunit // non-traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr8:121408082-121457647 (-) // 93.14 // q24.12"]
["11759864_at",-0.45675516,0.011359692,0.07892656,-0.29705906,0.23514032,-0.011359692,0.8769804,0.6903454,-1.0700885,-0.09773012,1.0700885,"down","ZNF609",23060,"","0005634 // nucleus // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation","chr15:64791490-64795257 (+) // 88.91 // q22.31"]
["11729496_at",-0.08224535,0.2534039,0.20242691,-0.12272191,-0.22457838,0.08224559,0.5088427,0.19780946,1.1589996,0.21288002,1.1589996,"up","FAM133A",286499,"","","","chrX:92929011-92967264 (+) // 85.82 // q21.32"]
["11744344_x_at",-0.0056200027,-0.02346325,0.0056200027,-0.09334946,0.079875946,0.10673523,0.8146369,0.5718373,-1.0273361,-0.038908273,1.0273361,"down","YY1AP1",55249,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:155629244-155658269 (-) // 91.87 // q22"]
["11754582_a_at",0.081566334,0.003991127,-0.07019186,-0.08221722,0.06019163,-0.003991604,0.9383385,0.8297918,1.0096073,0.0137942685,1.0096073,"up","RMND5B",64777,"","","","chr5:177557532-177577568 (+) // 83.81 // q35.3"]
["11726838_s_at",-0.14520407,-0.08119631,0.00021982193,-0.00021982193,0.17847824,0.05210781,0.34116864,0.08787018,-1.1112491,-0.15218224,1.1112491,"down","SCAI",286205,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from mutant phenotype /// 0035024 // negative regulation of Rho protein signal transduction // inferred from sequence or structural similarity","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003714 // transcription corepressor activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction","chr9:127704813-127905797 (-) // 79.3 // q33.3"]
["11718621_at",-0.050561905,0.032402992,0.02208519,-0.09416199,0.049865723,-0.02208519,0.86112803,0.65801024,1.0163772,0.023435932,1.0163772,"up","DUSP12",11266,"0006464 // cellular protein modification process // traceable author statement /// 0006470 // protein dephosphorylation // not recorded /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0007254 // JNK cascade // not recorded /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0033133 // positive regulation of glucokinase activity // not recorded /// 0033133 // positive regulation of glucokinase activity // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded /// 0005737 // cytoplasm // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // not recorded /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0019900 // kinase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:161719567-161726952 (+) // 93.12 // q23.3"]
["11756860_x_at",0.0908699,0.010611534,-0.006213188,-0.015291214,0.006213188,-0.018601418,0.57571185,0.2560079,1.0288143,0.040982623,1.0288143,"up","RNH1",6050,"0006402 // mRNA catabolic process // non-traceable author statement /// 0045765 // regulation of angiogenesis // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0032311 // angiogenin-PRI complex // inferred from physical interaction","0005515 // protein binding // inferred from physical interaction /// 0008428 // ribonuclease inhibitor activity // inferred from direct assay","chr11:494515-506741 (-) // 99.82 // p15.5"]
["11738191_a_at",0.21444416,0.03600502,-0.17169714,0.2190113,-0.03600502,-0.32012844,0.89372873,0.72625524,1.0511423,0.071958035,1.0511423,"up","MTFR1",9650,"0000266 // mitochondrial fission // inferred from sequence or structural similarity /// 0007005 // mitochondrion organization // inferred from sequence or structural similarity /// 0009060 // aerobic respiration // inferred from sequence or structural similarity","0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","","chr8:66556887-66620573 (+) // 91.46 // q13.1"]
["11719986_at",-0.10980129,-0.28625202,-0.24870586,0.24421024,0.18860435,0.10980129,0.07569554,0.0039629247,-1.3156645,-0.39579168,1.3156645,"down","CCDC117",150275,"","","","chr22:29168657-29185283 (+) // 93.4 // q12.1"]
["11734482_at",-0.11868763,0.047747135,0.047527313,-0.31476545,-0.04752779,0.16379738,0.88865453,0.7155326,1.041282,0.058360912,1.041282,"up","ETV3L",440695,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr1:157061835-157069600 (-) // 95.81 // q23.1"]
["11727739_a_at",-0.18207026,0.027759075,0.10457134,-0.26692247,-0.027759075,0.24214649,0.99828154,0.9958937,1.000646,0.0009316731,1.000646,"up","CD300LF",146722,"","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr17:72690451-72709108 (-) // 69.13 // q25.1"]
["11755752_a_at",-0.19274282,-0.06582785,0.06582785,-0.51747894,0.06611395,0.21203375,0.98304015,0.95049065,1.0108223,0.015529391,1.0108223,"up","IL16",3603,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006935 // chemotaxis // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0030595 // leukocyte chemotaxis // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0050930 // induction of positive chemotaxis // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0005125 // cytokine activity // inferred from electronic annotation","chr15:81475199-81605101 (+) // 88.0 // q25.1"]
["11740953_s_at",0.03934002,0.040550232,-0.03934002,-0.32905626,-0.099125385,0.15645981,0.7756786,0.5061265,1.0748167,0.104090646,1.0748167,"up","HDAC11",79885,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0014003 // oligodendrocyte development // inferred from electronic annotation /// 0016568 // chromatin modification // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016575 // histone deacetylation // inferred from direct assay","0000118 // histone deacetylase complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0004407 // histone deacetylase activity // inferred from direct assay /// 0008134 // transcription factor binding // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0031078 // histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0032041 // NAD-dependent histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0032129 // histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0034739 // histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation /// 0046969 // NAD-dependent histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0046970 // NAD-dependent histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation","chr3:13522743-13547924 (+) // 92.33 // p25.1"]
["11722587_at",0.008673668,-0.047516823,-0.008673668,0.082927704,0.15556335,-0.057204247,0.6230269,0.30325583,-1.0542872,-0.07626792,1.0542872,"down","EXOSC3",51010,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0006364 // rRNA processing // inferred from direct assay /// 0006364 // rRNA processing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // inferred from mutant phenotype /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement /// 0045006 // DNA deamination // inferred from direct assay /// 0045190 // isotype switching // inferred from sequence or structural similarity /// 0045190 // isotype switching // inferred from electronic annotation /// 0071034 // CUT catabolic process // inferred from mutant phenotype","0000176 // nuclear exosome (RNase complex) // inferred from direct assay /// 0000177 // cytoplasmic exosome (RNase complex) // inferred from direct assay /// 0000178 // exosome (RNase complex) // inferred from direct assay /// 0000178 // exosome (RNase complex) // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0035327 // transcriptionally active chromatin // inferred from mutant phenotype","0000175 // 3'-5'-exoribonuclease activity // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0004532 // exoribonuclease activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr9:37779932-37785065 (-) // 85.69 // p13.2"]
["11738392_at",-0.03180623,-0.082075834,0.03180623,-0.07994914,0.2947402,0.10025358,0.6260449,0.30679402,-1.0960954,-0.13237342,1.0960954,"down","LIPN",643418,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation","chr10:90521162-90537999 (+) // 99.75 // q23.31"]
["11715616_a_at",0.07831001,0.040356636,-0.007817268,-0.0045404434,0.0045394897,-0.032111168,0.45245004,0.15522617,1.0335827,0.04765381,1.0335827,"up","NDUFAB1",4706,"0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0006633 // fatty acid biosynthetic process // non-traceable author statement /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0009249 // protein lipoylation // inferred from mutant phenotype /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // inferred from sequence or structural similarity /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0005759 // mitochondrial matrix // inferred from sequence or structural similarity /// 0031966 // mitochondrial membrane // inferred from sequence or structural similarity /// 0031966 // mitochondrial membrane // non-traceable author statement /// 0070469 // respiratory chain // inferred from electronic annotation","0000036 // acyl carrier activity // non-traceable author statement /// 0005504 // fatty acid binding // inferred from sequence or structural similarity /// 0005509 // calcium ion binding // non-traceable author statement /// 0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement /// 0031177 // phosphopantetheine binding // inferred from electronic annotation","chr16:23592332-23607637 (-) // 78.93 // p12.2"]
["11739585_a_at",0.12561941,0.15447283,0.24011993,-0.16692543,-0.12561941,-0.12561941,0.042010594,0.0010767367,1.2421093,0.31279212,1.2421093,"up","PRKD3",23683,"0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004697 // protein kinase C activity // inferred from electronic annotation /// 0004697 // protein kinase C activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:37477644-37551513 (-) // 92.1 // p22.2"]
["11758958_at",-0.104643345,-0.09068775,0.016943455,0.16921377,0.0023298264,-0.0023298264,0.46569395,0.16483358,-1.0836262,-0.115867116,1.0836262,"down","DEFA1 /// DEFA1B /// DEFA3","1667 /// 1668 /// 728358","0006935 // chemotaxis // traceable author statement /// 0006952 // defense response // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0031640 // killing of cells of other organism // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0050832 // defense response to fungus // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005796 // Golgi lumen // traceable author statement /// 0031012 // extracellular matrix // inferred from direct assay /// 0035578 // azurophil granule lumen // traceable author statement","","chr8:6873390-6874955 (-) // 79.24 // p23.1"]
["11723776_s_at",0.019451141,0.05359125,-0.027026176,-0.03571129,-0.019451141,0.12078428,0.96814513,0.91097873,-1.0045401,-0.006535135,1.0045401,"down","BRD3",8019,"0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003682 // chromatin binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0070577 // histone acetyl-lysine binding // inferred from direct assay","chr9:136895426-136918712 (-) // 93.11 // q34.2"]
["11745489_s_at",-0.035621643,-0.040443897,0.035621643,-0.055095196,0.040472507,0.09813166,0.7468553,0.46331128,-1.0290532,-0.041317582,1.0290532,"down","GOLGA8C /// GOLGA8DP /// GOLGA8E /// GOLGA8F /// GOLGA8G","100132565 /// 100132979 /// 283768 /// 390535 /// 729786","","0005794 // Golgi apparatus // inferred from electronic annotation","","chr15:28623789-28636412 (+) // 99.56 // q13.1 /// chr15:23435075-23447664 (+) // 98.87 // q11.2 /// chr15:20767679-20780266 (+) // 98.85 // q11.2 /// chr15:28765515-28778137 (-) // 99.54 // q13.1 /// chr15:22703113-22715722 (-) // 98.96 // q11.2"]
["11723426_a_at",0.017713547,-0.026193619,-0.0047369003,0.0047369003,-0.004849434,0.029989243,0.72404265,0.43028885,-1.0100065,-0.014364645,1.0100065,"down","ETFB",2109,"0006810 // transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0009055 // electron carrier activity // inferred from electronic annotation /// 0009055 // electron carrier activity // traceable author statement","chr19:51848424-51869674 (-) // 91.6 // q13.41"]
["11756480_s_at",-0.02848053,-0.15509415,-0.12684631,0.26030922,0.13273907,0.02848053,0.21259335,0.034226906,-1.1842579,-0.24398325,1.1842579,"down","CSDE1",7812,"0000165 // MAPK cascade // traceable author statement /// 0000186 // activation of MAPKK activity // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008542 // visual learning // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008584 // male gonad development // traceable author statement /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0032228 // regulation of synaptic transmission, GABAergic // inferred from electronic annotation /// 0035022 // positive regulation of Rac protein signal transduction // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement /// 0051146 // striated muscle cell differentiation // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr1:115259537-115292811 (-) // 98.74 // p13.2"]
["11744572_a_at",0.3010559,-0.04430294,-0.062031746,0.23868656,-0.029254913,0.029254913,0.9729809,0.92355454,-1.0102099,-0.01465511,1.0102099,"down","KLF5",688,"0001525 // angiogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0030033 // microvillus assembly // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr13:73629113-73650116 (+) // 98.09 // q22.1"]
["11740190_s_at",0.083182335,0.11915636,0.3911867,-0.19796848,-0.083182335,-0.12614298,0.20403516,0.03154919,1.2601596,0.33360648,1.2601596,"up","DICER1",23405,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001942 // hair follicle development // inferred from electronic annotation /// 0006396 // RNA processing // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0010070 // zygote asymmetric cell division // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010626 // negative regulation of Schwann cell proliferation // inferred from sequence or structural similarity /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0014040 // positive regulation of Schwann cell differentiation // inferred from sequence or structural similarity /// 0019827 // stem cell maintenance // inferred from electronic annotation /// 0021522 // spinal cord motor neuron differentiation // inferred from electronic annotation /// 0021675 // nerve development // inferred from sequence or structural similarity /// 0021889 // olfactory bulb interneuron differentiation // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030422 // production of siRNA involved in RNA interference // inferred from direct assay /// 0030422 // production of siRNA involved in RNA interference // inferred from electronic annotation /// 0030423 // targeting of mRNA for destruction involved in RNA interference // inferred from mutant phenotype /// 0031047 // gene silencing by RNA // inferred from electronic annotation /// 0031054 // pre-miRNA processing // inferred from direct assay /// 0031054 // pre-miRNA processing // inferred from electronic annotation /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0031643 // positive regulation of myelination // inferred from sequence or structural similarity /// 0032290 // peripheral nervous system myelin formation // inferred from sequence or structural similarity /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0035196 // production of miRNAs involved in gene silencing by miRNA // inferred from sequence or structural similarity /// 0035196 // production of miRNAs involved in gene silencing by miRNA // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0042487 // regulation of odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045069 // regulation of viral genome replication // inferred from electronic annotation /// 0045595 // regulation of cell differentiation // inferred from electronic annotation /// 0045664 // regulation of neuron differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048536 // spleen development // inferred from electronic annotation /// 0048565 // digestive tract development // inferred from electronic annotation /// 0048730 // epidermis morphogenesis // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from electronic annotation /// 0048812 // neuron projection morphogenesis // inferred from sequence or structural similarity /// 0050767 // regulation of neurogenesis // inferred from electronic annotation /// 0051225 // spindle assembly // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from electronic annotation /// 0055013 // cardiac muscle cell development // inferred from electronic annotation /// 0060576 // intestinal epithelial cell development // inferred from electronic annotation /// 0070173 // regulation of enamel mineralization // inferred from electronic annotation /// 0071335 // hair follicle cell proliferation // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016442 // RNA-induced silencing complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0003725 // double-stranded RNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0004525 // ribonuclease III activity // inferred from direct assay /// 0004525 // ribonuclease III activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016891 // endoribonuclease activity, producing 5'-phosphomonoesters // inferred from electronic annotation /// 0035198 // miRNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:95552565-95608087 (-) // 97.95 // q32.13"]
["11761803_at",-0.18824959,0.104542255,0.14441586,-0.17335367,-0.104542255,0.13971901,0.8637915,0.6638053,1.0470245,0.066295184,1.0470245,"up","WBSCR27",155368,"","","","chr7:73253910-73256846 (-) // 73.3 // q11.23"]
["11741905_at",-0.22867489,0.05660677,-0.15254188,-0.022302866,0.022303104,0.14273548,0.49750406,0.18892978,-1.1140252,-0.15578191,1.1140252,"down","DEFB105A /// DEFB105B","245908 /// 504180","0006952 // defense response // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","","chr8:7345190-7347115 (+) // 100.0 // p23.1 /// chr8:7679487-7681412 (-) // 100.0 // p23.1"]
["11752685_a_at",0.10889411,-0.009455442,0.25733495,-0.15443921,-0.0582757,0.009455442,0.37903264,0.10853678,1.1381397,0.18667768,1.1381397,"up","AQP4",361,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0006833 // water transport // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007588 // excretion // traceable author statement /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0030104 // water homeostasis // inferred from electronic annotation /// 0050891 // multicellular organismal water homeostasis // inferred from expression pattern /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070295 // renal water absorption // inferred from electronic annotation /// 0071346 // cellular response to interferon-gamma // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0046930 // pore complex // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0005372 // water transmembrane transporter activity // traceable author statement /// 0015250 // water channel activity // not recorded /// 0015250 // water channel activity // inferred from electronic annotation /// 0015288 // porin activity // inferred from electronic annotation","chr18:24435477-24442812 (-) // 98.62 // q11.2"]
["11747865_s_at",0.10318756,-0.0546875,-0.12677383,0.124402046,-0.016403198,0.016403198,0.7362501,0.44662106,-1.0479418,-0.0675586,1.0479418,"down","EIF3C /// EIF3CL","728689 /// 8663","0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred by curator /// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // traceable author statement /// 0006413 // translational initiation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from direct assay /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from electronic annotation","0003743 // translation initiation factor activity // inferred by curator /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0003743 // translation initiation factor activity // inferred from electronic annotation","chr16:28722785-28746857 (+) // 99.92 // p11.2 /// chr16:28391095-28415161 (-) // 99.87 // p11.2"]
["11740341_x_at",0.011705399,0.046632767,0.044304132,-0.2298522,-0.011705399,-0.0328753,0.44363254,0.14859602,1.0910307,0.12569171,1.0910307,"up","ZNF491",126069,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:11909344-11919306 (+) // 86.57 // p13.2"]
["11716606_s_at",0.10108471,0.006128311,-0.006128311,0.059410095,-0.05737686,-0.02094841,0.74125373,0.4545966,1.0281138,0.04000002,1.0281138,"up","STOML2",30968,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0008180 // signalosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0005102 // receptor binding // traceable author statement","chr9:35099592-35103181 (-) // 97.0 // p13.3"]
["11717150_s_at",0.32397556,-0.11579132,-0.13171291,0.30306435,0.0024709702,-0.0024709702,0.8799713,0.6967656,-1.0537488,-0.07553105,1.0537488,"down","C16orf57",79650,"","","","chr16:58035276-58055522 (+) // 82.36 // q21"]
["11740006_a_at",0.06389618,0.15912342,0.21839333,-0.3139181,-0.06389618,-0.07013035,0.21252295,0.03418842,1.2281208,0.29645246,1.2281208,"up","KIAA0895",23366,"","","","chr7:36363758-36406850 (-) // 99.84 // p14.2"]
["11754427_a_at",0.14460707,-0.0023260117,0.22340775,-0.0025372505,0.0023264885,-0.11096668,0.3705927,0.103939906,1.1164784,0.1589554,1.1164784,"up","FAM190B",54462,"","","","chr10:86153608-86278269 (+) // 92.2 // q23.1"]
["11737900_x_at",0.20124292,0.016217232,-0.0069680214,-0.11535692,0.0069680214,-0.072472095,0.45463726,0.15693742,1.0946358,0.13045101,1.0946358,"up","TOX2",84969,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr20:42602002-42698252 (+) // 91.5 // q13.12"]
["11750479_a_at",0.024993896,-0.01818037,-0.19161129,0.08943224,-0.20736837,0.018179893,0.930398,0.81148714,-1.0198431,-0.028347217,1.0198431,"down","PPARGC1A",10891,"0001659 // temperature homeostasis // traceable author statement /// 0001678 // cellular glucose homeostasis // non-traceable author statement /// 0006094 // gluconeogenesis // non-traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006461 // protein complex assembly // traceable author statement /// 0007005 // mitochondrion organization // non-traceable author statement /// 0007005 // mitochondrion organization // inferred from electronic annotation /// 0007586 // digestion // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010941 // regulation of cell death // inferred from direct assay /// 0014850 // response to muscle activity // inferred from sequence or structural similarity /// 0014850 // response to muscle activity // inferred from electronic annotation /// 0019395 // fatty acid oxidation // non-traceable author statement /// 0022904 // respiratory electron transport chain // inferred from electronic annotation /// 0030521 // androgen receptor signaling pathway // non-traceable author statement /// 0034599 // cellular response to oxidative stress // inferred from electronic annotation /// 0035066 // positive regulation of histone acetylation // traceable author statement /// 0042594 // response to starvation // non-traceable author statement /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0045333 // cellular respiration // traceable author statement /// 0045722 // positive regulation of gluconeogenesis // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046321 // positive regulation of fatty acid oxidation // traceable author statement /// 0046321 // positive regulation of fatty acid oxidation // inferred from electronic annotation /// 0050821 // protein stabilization // traceable author statement /// 0050873 // brown fat cell differentiation // traceable author statement /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0070997 // neuron death // inferred from direct assay","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005665 // DNA-directed RNA polymerase II, core complex // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0001104 // RNA polymerase II transcription cofactor activity // traceable author statement /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // traceable author statement /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0016922 // ligand-dependent nuclear receptor binding // inferred from physical interaction /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from direct assay /// 0050681 // androgen receptor binding // non-traceable author statement","chr4:23816011-23883755 (-) // 98.71 // p15.2"]
["11720670_a_at",0.02828312,-0.02828312,-0.057447433,0.16091156,0.06333923,-0.23369503,0.9648293,0.9014254,-1.0111529,-0.016001116,1.0111529,"down","SNX7",51375,"0006810 // transport // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0008289 // lipid binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr1:99127212-99226056 (+) // 94.13 // p21.3"]
["11730183_s_at",0.016222,-0.031215668,-0.016222,0.15421009,0.053019524,-0.056554794,0.6920301,0.38658136,-1.0429212,-0.060630135,1.0429212,"down","SH3GL2",6456,"0002090 // regulation of receptor internalization // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007417 // central nervous system development // traceable author statement /// 0016044 // cellular membrane organization // traceable author statement /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048488 // synaptic vesicle endocytosis // inferred from electronic annotation","0000139 // Golgi membrane // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction","chr9:17578708-17797122 (+) // 97.99 // p22.2"]
["11756721_a_at",-0.026477814,0.027392387,0.06625366,-0.08445263,0.026477814,-0.06476498,0.5348878,0.21913128,1.044855,0.06330274,1.044855,"up","CASP8AP2",9994,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from sequence or structural similarity /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0008625 // induction of apoptosis via death domain receptors // inferred from sequence or structural similarity /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005123 // death receptor binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008656 // cysteine-type endopeptidase activator activity involved in apoptotic process // inferred from sequence or structural similarity /// 0016505 // apoptotic protease activator activity // inferred from sequence or structural similarity","chr6:90539659-90584153 (+) // 88.09 // q15"]
["11747635_x_at",0.30117607,0.13037062,-0.10291815,0.0947814,-0.0947814,-0.17157793,0.6232817,0.30354622,1.1225156,0.16673544,1.1225156,"up","PYGB",5834,"0005975 // carbohydrate metabolic process // traceable author statement /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0005980 // glycogen catabolic process // non-traceable author statement /// 0005980 // glycogen catabolic process // traceable author statement /// 0005980 // glycogen catabolic process // inferred from electronic annotation /// 0006006 // glucose metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0030424 // axon // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004645 // phosphorylase activity // inferred from electronic annotation /// 0008144 // drug binding // inferred from electronic annotation /// 0008184 // glycogen phosphorylase activity // non-traceable author statement /// 0008184 // glycogen phosphorylase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr20:25228720-25277544 (+) // 96.97 // p11.21"]
["11750124_a_at",0.2987213,-0.08555937,-0.04248619,-0.0007328987,0.008971691,0.0007328987,0.8719312,0.6804666,1.0380683,0.05390136,1.0380683,"up","NCAM2",4685,"0007155 // cell adhesion // inferred from electronic annotation /// 0007158 // neuron cell-cell adhesion // traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0030424 // axon // inferred from electronic annotation","","chr21:22370693-22910633 (+) // 96.81 // q21.1"]
["11731513_at",0.16780758,0.036702156,0.17915535,-0.03670168,-0.17684793,-0.04734707,0.19401263,0.02862565,1.1605864,0.21485387,1.1605864,"up","XPO4",64328,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0046827 // positive regulation of protein export from nucleus // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr13:21351468-21476914 (-) // 94.93 // q12.11"]
["11737834_at",-0.28658915,-0.08455467,0.055660725,-0.055660725,0.19907236,0.36441803,0.4538386,0.15631452,-1.2095225,-0.27443758,1.2095225,"down","IL12B",3593,"0001916 // positive regulation of T cell mediated cytotoxicity // inferred from sequence or structural similarity /// 0001916 // positive regulation of T cell mediated cytotoxicity // inferred from electronic annotation /// 0002230 // positive regulation of defense response to virus by host // inferred from direct assay /// 0002230 // positive regulation of defense response to virus by host // inferred from sequence or structural similarity /// 0002230 // positive regulation of defense response to virus by host // inferred from electronic annotation /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from direct assay /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from sequence or structural similarity /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from electronic annotation /// 0002860 // positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target // inferred from direct assay /// 0002862 // negative regulation of inflammatory response to antigenic stimulus // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0010224 // response to UV-B // inferred from direct assay /// 0010535 // positive regulation of activation of JAK2 kinase activity // inferred from direct assay /// 0016477 // cell migration // inferred from direct assay /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0019953 // sexual reproduction // traceable author statement /// 0030101 // natural killer cell activation // inferred from direct assay /// 0032693 // negative regulation of interleukin-10 production // inferred from mutant phenotype /// 0032700 // negative regulation of interleukin-17 production // inferred from direct assay /// 0032725 // positive regulation of granulocyte macrophage colony-stimulating factor production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0032733 // positive regulation of interleukin-10 production // inferred from direct assay /// 0032733 // positive regulation of interleukin-10 production // traceable author statement /// 0032735 // positive regulation of interleukin-12 production // inferred from direct assay /// 0032740 // positive regulation of interleukin-17 production // inferred from direct assay /// 0032760 // positive regulation of tumor necrosis factor production // inferred from mutant phenotype /// 0032816 // positive regulation of natural killer cell activation // inferred by curator /// 0032816 // positive regulation of natural killer cell activation // inferred from direct assay /// 0032819 // positive regulation of natural killer cell proliferation // inferred from direct assay /// 0034105 // positive regulation of tissue remodeling // inferred by curator /// 0034393 // positive regulation of smooth muscle cell apoptotic process // inferred from direct assay /// 0042035 // regulation of cytokine biosynthetic process // traceable author statement /// 0042088 // T-helper 1 type immune response // traceable author statement /// 0042093 // T-helper cell differentiation // inferred from direct assay /// 0042095 // interferon-gamma biosynthetic process // traceable author statement /// 0042102 // positive regulation of T cell proliferation // inferred from direct assay /// 0042102 // positive regulation of T cell proliferation // inferred from electronic annotation /// 0042104 // positive regulation of activated T cell proliferation // inferred from direct assay /// 0042346 // positive regulation of NF-kappaB import into nucleus // traceable author statement /// 0042510 // regulation of tyrosine phosphorylation of Stat1 protein // inferred from direct assay /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from direct assay /// 0042520 // positive regulation of tyrosine phosphorylation of Stat4 protein // inferred from direct assay /// 0042523 // positive regulation of tyrosine phosphorylation of Stat5 protein // inferred from direct assay /// 0042832 // defense response to protozoan // inferred from electronic annotation /// 0043382 // positive regulation of memory T cell differentiation // inferred from sequence or structural similarity /// 0044130 // negative regulation of growth of symbiont in host // inferred from electronic annotation /// 0045078 // positive regulation of interferon-gamma biosynthetic process // traceable author statement /// 0045672 // positive regulation of osteoclast differentiation // inferred from direct assay /// 0045785 // positive regulation of cell adhesion // inferred from direct assay /// 0048662 // negative regulation of smooth muscle cell proliferation // inferred from direct assay /// 0050671 // positive regulation of lymphocyte proliferation // inferred from direct assay /// 0050729 // positive regulation of inflammatory response // inferred by curator /// 0050829 // defense response to Gram-negative bacterium // inferred from direct assay /// 0051135 // positive regulation of NK T cell activation // inferred by curator /// 0051135 // positive regulation of NK T cell activation // inferred from direct assay /// 0051142 // positive regulation of NK T cell proliferation // inferred from direct assay /// 0051607 // defense response to virus // inferred from electronic annotation /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation /// 0071346 // cellular response to interferon-gamma // inferred from electronic annotation /// 2000318 // positive regulation of T-helper 17 type immune response // inferred from sequence or structural similarity /// 2000330 // positive regulation of T-helper 17 cell lineage commitment // inferred from sequence or structural similarity","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043514 // interleukin-12 complex // inferred from direct assay /// 0043514 // interleukin-12 complex // inferred from electronic annotation /// 0070743 // interleukin-23 complex // inferred from direct assay","0004896 // cytokine receptor activity // inferred from electronic annotation /// 0005125 // cytokine activity // inferred from direct assay /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005126 // cytokine receptor binding // inferred from electronic annotation /// 0005143 // interleukin-12 receptor binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from direct assay /// 0042164 // interleukin-12 alpha subunit binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0045519 // interleukin-23 receptor binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction","chr5:158741790-158757895 (-) // 87.07 // q33.3"]
["11747064_x_at",0.44717407,0.026154518,-0.026154518,0.24791622,-0.19758034,-0.1372261,0.7262643,0.43362257,1.1313313,0.1780215,1.1313313,"up","ANXA11",311,"0006909 // phagocytosis // inferred from expression pattern /// 0007049 // cell cycle // inferred from electronic annotation /// 0007109 // cytokinesis, completion of separation // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // non-traceable author statement /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // non-traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation /// 0042581 // specific granule // inferred from direct assay /// 0042582 // azurophil granule // inferred from direct assay /// 0045335 // phagocytic vesicle // inferred from direct assay","0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005544 // calcium-dependent phospholipid binding // inferred from electronic annotation /// 0008429 // phosphatidylethanolamine binding // inferred from electronic annotation /// 0044548 // S100 protein binding // inferred from physical interaction /// 0048306 // calcium-dependent protein binding // inferred from physical interaction","chr10:81915433-81965314 (-) // 91.62 // q22.3"]
["11718976_x_at",-0.31808138,0.010285854,-0.010285854,0.13788557,0.40981436,-0.017773151,0.45837572,0.15983105,-1.2164435,-0.28266937,1.2164435,"down","ARPP19",10776,"0000086 // G2/M transition of mitotic cell cycle // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from mutant phenotype /// 0007067 // mitosis // inferred from electronic annotation /// 0045722 // positive regulation of gluconeogenesis // inferred from direct assay /// 0046326 // positive regulation of glucose import // non-traceable author statement /// 0051301 // cell division // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0004864 // protein phosphatase inhibitor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from direct assay /// 0008601 // protein phosphatase type 2A regulator activity // inferred from sequence or structural similarity /// 0015459 // potassium channel regulator activity // inferred from direct assay /// 0019212 // phosphatase inhibitor activity // inferred from sequence or structural similarity /// 0051721 // protein phosphatase 2A binding // inferred from sequence or structural similarity","chr15:52839244-52849941 (-) // 74.63 // q21.2"]
["11748340_x_at",-0.057236195,0.05103302,0.012339592,-0.08456135,-0.012339592,0.16207647,0.93281615,0.81727135,-1.0137343,-0.019679628,1.0137343,"down","LAIR1",3903,"","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr19:54866879-54876454 (-) // 100.0 // q13.42"]
["11737797_a_at",0.02808714,-0.112846375,-0.18758392,0.09488058,-0.028086662,0.049870968,0.44430685,0.1491367,-1.0940429,-0.12966931,1.0940429,"down","FAM40A",85369,"0022604 // regulation of cell morphogenesis // inferred from mutant phenotype /// 0030866 // cortical actin cytoskeleton organization // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:110577240-110597245 (+) // 97.72 // p13.3"]
["11739933_a_at",-0.34118652,0.021935463,0.00587368,-0.00587368,0.09451294,-0.0064697266,0.65949595,0.34452137,-1.095697,-0.13184896,1.095697,"down","FAM111B",374393,"0008152 // metabolic process // inferred from electronic annotation","","0003824 // catalytic activity // inferred from electronic annotation","chr11:58874657-58894312 (+) // 66.83 // q12.1"]
["11760711_at",-0.06996727,0.020749569,0.0004491806,-0.0004491806,0.19440937,-0.024970055,0.69149625,0.38591635,-1.0516001,-0.07258618,1.0516001,"down","TMEM14B",81853,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:10748037-10756585 (+) // 80.64 // p24.2"]
["11739530_at",-0.23355722,-0.07532263,0.024359703,0.02114582,-0.02114582,0.34237003,0.5149649,0.20229535,-1.1558573,-0.20896332,1.1558573,"down","PLGLB1 /// PLGLB2","5342 /// 5343","","0005576 // extracellular region // inferred from electronic annotation","","chr2:88047605-88058995 (+) // 69.57 // p11.2 /// chr2:106998561-107010027 (+) // 68.21 // q12.2 /// chr2:87237586-87248973 (-) // 69.5 // p11.2"]
["11733132_at",0.19929266,0.47879553,0.409163,-0.19929314,-0.4048891,-0.421741,0.06750555,0.0030872566,1.6294572,0.7043915,1.6294572,"up","OLFML1",283298,"","0005576 // extracellular region // inferred from electronic annotation","","chr11:7506599-7533136 (+) // 89.59 // p15.4"]
["11741029_x_at",-0.16550446,-0.06999016,-0.031098366,0.031098366,0.14698792,0.10815525,0.1807822,0.024642304,-1.1362484,-0.18427819,1.1362484,"down","CSTF1",1477,"0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006378 // mRNA polyadenylation // traceable author statement /// 0006379 // mRNA cleavage // traceable author statement /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr20:54967415-54979582 (+) // 99.31 // q13.2"]
["11753208_x_at",0.1777091,0.2411108,0.023964882,-0.064676285,-0.055908203,-0.023964882,0.23110089,0.040641163,1.1453416,0.19577798,1.1453416,"up","EGFL7",51162,"0001525 // angiogenesis // inferred from electronic annotation /// 0001568 // blood vessel development // inferred from sequence or structural similarity /// 0001568 // blood vessel development // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from sequence or structural similarity /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from electronic annotation","0005576 // extracellular region // inferred from sequence or structural similarity /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr9:139559209-139566951 (+) // 99.82 // q34.3"]
["11743091_x_at",0.10243225,0.025060654,0.09080315,-0.025060654,-0.21926594,-0.16425705,0.19504192,0.028903874,1.1558546,0.2089599,1.1558546,"up","SLC36A4",120103,"0006810 // transport // inferred from electronic annotation /// 0006865 // amino acid transport // inferred from electronic annotation /// 0015808 // L-alanine transport // inferred from direct assay /// 0015824 // proline transport // inferred from direct assay /// 0015827 // tryptophan transport // inferred from direct assay","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0015293 // symporter activity // inferred from electronic annotation","chr11:92880306-92931141 (-) // 84.23 // q21"]
["11760101_a_at",-0.073806286,-0.21265078,-0.16056395,0.24846888,0.17407703,0.073806286,0.10699579,0.008328754,-1.2435442,-0.3144578,1.2435442,"down","IP6K2",51447,"0016310 // phosphorylation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0046854 // phosphatidylinositol phosphorylation // inferred from direct assay /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0000832 // inositol hexakisphosphate 5-kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008440 // inositol-1,4,5-trisphosphate 3-kinase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0052723 // inositol hexakisphosphate 1-kinase activity // inferred from electronic annotation /// 0052724 // inositol hexakisphosphate 3-kinase activity // inferred from electronic annotation","chr3:48730891-48754654 (-) // 94.47 // p21.31"]
["11750826_x_at",0.44993067,0,0.19873643,0,-0.0985024,-0.07707405,0.37935683,0.108826526,1.2097826,0.27474782,1.2097826,"up","ADAMDEC1",27299,"0006508 // proteolysis // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement /// 0007162 // negative regulation of cell adhesion // non-traceable author statement /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0004222 // metalloendopeptidase activity // non-traceable author statement /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:24241932-24263526 (+) // 95.33 // p21.2"]
["11741122_a_at",-0.015019894,0.20890331,0.16690731,-0.18074036,-0.050230026,0.015019894,0.36102605,0.09855401,1.1425419,0.19224705,1.1425419,"up","LYPD1",116372,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:133402336-133429152 (-) // 98.35 // q21.2"]
["11721487_s_at",-0.030802727,-0.28110218,-0.4273467,0.2715292,0.11689997,0.030802727,0.24691749,0.04641517,-1.3069112,-0.38616115,1.3069112,"down","TP53RK",112858,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0009103 // lipopolysaccharide biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0002039 // p53 binding // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation","chr20:45313003-45318276 (-) // 57.78 // q13.12"]
["11731663_a_at",-0.0041031837,0.11768818,0.041199207,0,0,-0.16728473,0.48529974,0.17979522,1.0772524,0.107356295,1.0772524,"up","KIAA1217",56243,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0048706 // embryonic skeletal system development // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation","","chr10:24497595-24836772 (+) // 97.56 // p12.2"]
["11726054_a_at",-0.122093916,0.14487696,0.15995193,-0.060687542,0.060687542,-0.1014328,0.7111593,0.41286904,1.06786,0.094722524,1.06786,"up","MUC4",4585,"0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0016266 // O-glycan processing // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0005796 // Golgi lumen // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005176 // ErbB-2 class receptor binding // traceable author statement /// 0005201 // extracellular matrix structural constituent // non-traceable author statement /// 0030197 // extracellular matrix constituent, lubricant activity // non-traceable author statement","chr3:195473635-195539148 (-) // 98.61 // q29"]
["11759993_at",-0.6757779,0.01752758,-0.11037731,0.12519789,-0.01752758,0.08535385,0.52916867,0.21404575,-1.2488071,-0.32055062,1.2488071,"down","ORAOV1",220064,"","","","chr11:69467843-69490112 (-) // 92.73 // q13.3"]
["11738031_at",-0.27720165,0.009331703,0.039301872,-0.27941275,-0.009331703,0.052696705,0.995112,0.98696303,1.0017296,0.0024931408,1.0017296,"up","FAM153C",653316,"","","","chr5:177435688-177474656 (+) // 88.58 // q35.3 /// chr5:175490073-175541588 (+) // 89.57 // q35.2 /// chr5:177150577-177208143 (-) // 97.25 // q35.3"]
["11749254_a_at",-0.16947937,-0.16192722,-0.20358086,0.24537086,0.16192722,0.19173145,0.021350807,0.00016396296,-1.2995442,-0.3780057,1.2995442,"down","PRSS23",11098,"0006508 // proteolysis // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr11:86511586-86520169 (+) // 98.34 // q14.2"]
["11741653_a_at",-0.00032877922,0.0003285408,-0.09940076,-0.17060232,0.26162767,0.21909046,0.6942663,0.3892361,-1.0992393,-0.13650556,1.0992393,"down","ABCG4",64137,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0033344 // cholesterol efflux // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0017127 // cholesterol transporter activity // traceable author statement /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction","chr11:119020222-119033372 (+) // 98.9 // q23.3"]
["11731864_at",-0.023040771,0.020127058,-0.1094079,-0.020127058,0.19000626,0.10616207,0.44047683,0.14645964,-1.0938798,-0.12945424,1.0938798,"down","NKX2-2",4821,"0003323 // type B pancreatic cell development // inferred from electronic annotation /// 0003326 // pancreatic A cell fate commitment // inferred from electronic annotation /// 0003327 // type B pancreatic cell fate commitment // inferred from electronic annotation /// 0003329 // pancreatic PP cell fate commitment // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007224 // smoothened signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007420 // brain development // traceable author statement /// 0014003 // oligodendrocyte development // inferred from electronic annotation /// 0021522 // spinal cord motor neuron differentiation // inferred from electronic annotation /// 0021529 // spinal cord oligodendrocyte cell differentiation // inferred from electronic annotation /// 0021530 // spinal cord oligodendrocyte cell fate specification // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031018 // endocrine pancreas development // traceable author statement /// 0031018 // endocrine pancreas development // inferred from electronic annotation /// 0045595 // regulation of cell differentiation // inferred from electronic annotation /// 0045597 // positive regulation of cell differentiation // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048468 // cell development // inferred from electronic annotation /// 0048565 // digestive tract development // inferred from electronic annotation /// 0048665 // neuron fate specification // inferred from electronic annotation /// 0048708 // astrocyte differentiation // inferred from electronic annotation /// 0048714 // positive regulation of oligodendrocyte differentiation // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0060580 // ventral spinal cord interneuron fate determination // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0044424 // intracellular part // inferred from electronic annotation","0001159 // core promoter proximal region DNA binding // inferred from sequence or structural similarity /// 0001159 // core promoter proximal region DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from sequence or structural similarity /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from sequence or structural similarity /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr20:21491647-21494664 (-) // 90.42 // p11.22"]
["11747004_a_at",0.46895456,-0.03908968,0.15327835,-0.14394999,0.03908968,-0.06146097,0.4954935,0.18736365,1.18906,0.24982148,1.18906,"up","SUOX",6821,"0000096 // sulfur amino acid metabolic process // traceable author statement /// 0000098 // sulfur amino acid catabolic process // traceable author statement /// 0006790 // sulfur compound metabolic process // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070221 // sulfide oxidation, using sulfide:quinone oxidoreductase // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0008482 // sulfite oxidase activity // traceable author statement /// 0008482 // sulfite oxidase activity // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0030151 // molybdenum ion binding // inferred from electronic annotation /// 0043546 // molybdopterin cofactor binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:56395217-56398842 (+) // 86.65 // q13.2"]
["11718167_s_at",0.08127117,0.2090187,0.1750803,-0.16788244,-0.08127165,-0.20627451,0.07886694,0.0044686194,1.237075,0.30693293,1.237075,"up","PRDM4",11108,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0030308 // negative regulation of cell growth // inferred from electronic annotation /// 0031670 // cellular response to nutrient // inferred from electronic annotation /// 0045786 // negative regulation of cell cycle // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005123 // death receptor binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:108126642-108154937 (-) // 98.66 // q23.3"]
["11755202_a_at",0.2986307,0.033079863,-0.033133984,-0.2209251,-0.033079624,0.1167357,0.6716101,0.36037406,1.1059467,0.1452818,1.1059467,"up","VTCN1",79679,"0050868 // negative regulation of T cell activation // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005102 // receptor binding // inferred from electronic annotation","chr1:117686212-117712794 (-) // 81.62 // p13.1"]
["11728128_a_at",-0.25071287,-0.053640366,-0.24816513,0.057556152,0.109381676,0.05363989,0.1582215,0.018994909,-1.1955701,-0.25769874,1.1955701,"down","APTX",54840,"0000012 // single strand break repair // inferred from direct assay /// 0000012 // single strand break repair // inferred from electronic annotation /// 0006266 // DNA ligation // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006302 // double-strand break repair // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from mutant phenotype /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0031647 // regulation of protein stability // inferred from mutant phenotype /// 0042542 // response to hydrogen peroxide // inferred from direct assay","0000785 // chromatin // inferred from direct assay /// 0000790 // nuclear chromatin // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0003684 // damaged DNA binding // inferred from direct assay /// 0003690 // double-stranded DNA binding // inferred from direct assay /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008967 // phosphoglycolate phosphatase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0033699 // DNA 5'-adenosine monophosphate hydrolase activity // inferred from direct assay /// 0033699 // DNA 5'-adenosine monophosphate hydrolase activity // inferred from electronic annotation /// 0046403 // polynucleotide 3'-phosphatase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0051219 // phosphoprotein binding // inferred from physical interaction","chr9:32972613-32990086 (-) // 93.36 // p21.1"]
["11742975_x_at",0.629076,-0.020162582,0.02016306,0.31367826,-0.065944195,-0.25128746,0.7545391,0.47516716,1.1573912,0.21087657,1.1573912,"up","USP42",84132,"0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016579 // protein deubiquitination // inferred from sequence or structural similarity /// 0016579 // protein deubiquitination // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","","0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr7:6144549-6201194 (+) // 99.03 // p22.1"]
["11727849_a_at",-0.017043114,-0.07178593,-0.08573246,0.017043114,0.030610085,0.02350998,0.15579805,0.018445328,-1.0584171,-0.08190825,1.0584171,"down","NIP7",51388,"0042254 // ribosome biogenesis // inferred from electronic annotation /// 0042255 // ribosome assembly // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr16:69373330-69377009 (+) // 81.89 // q22.1"]
["11756839_x_at",0.14581728,0.051441193,-0.013255596,-0.00429821,0.00429821,-0.12097311,0.47613698,0.17292334,1.0730064,0.10165867,1.0730064,"up","ZC3HAV1",56829,"0009615 // response to virus // inferred from electronic annotation /// 0032481 // positive regulation of type I interferon production // inferred from electronic annotation /// 0050691 // regulation of defense response to virus by host // inferred from electronic annotation /// 0071360 // cellular response to exogenous dsRNA // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003950 // NAD+ ADP-ribosyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:138745087-138764013 (-) // 88.78 // q34"]
["11724179_a_at",0.068600655,0.04072857,-0.04072857,-0.17096329,-0.18557358,0.07830238,0.5962258,0.27589828,1.0834343,0.115611725,1.0834343,"up","DNAJB5",25822,"0006457 // protein folding // inferred from electronic annotation /// 0006986 // response to unfolded protein // inferred from expression pattern","0005634 // nucleus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0031072 // heat shock protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr9:34990230-34998425 (+) // 98.54 // p13.3"]
["11746127_a_at",0.55172443,0.034451485,-0.034451485,0.41577816,-0.40707874,-0.12103367,0.776125,0.50680923,1.1658263,0.22135288,1.1658263,"up","CLPTM1",1209,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0033081 // regulation of T cell differentiation in thymus // inferred from sequence or structural similarity /// 0033081 // regulation of T cell differentiation in thymus // inferred from electronic annotation","0005887 // integral to plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from sequence or structural similarity /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr19:45458249-45496530 (+) // 96.91 // q13.32"]
["11760820_at",0.2842691,-0.07638693,-0.021059752,0.08501983,0.0053522587,-0.0053522587,0.9184209,0.7838977,1.0238003,0.03393427,1.0238003,"up","IDS",3423,"0008152 // metabolic process // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004423 // iduronate-2-sulfatase activity // inferred from electronic annotation /// 0004423 // iduronate-2-sulfatase activity // traceable author statement /// 0008484 // sulfuric ester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:148568662-148593154 (-) // 82.9 // q28"]
["11718187_a_at",-0.0042696,0.0042696,0.021877289,0.008961678,-0.05168152,-0.020316124,0.52787924,0.2130219,1.0198128,0.028304381,1.0198128,"up","BNIP1",662,"0006810 // transport // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from physical interaction /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0006917 // induction of apoptosis // inferred from mutant phenotype /// 0007029 // endoplasmic reticulum organization // inferred from mutant phenotype /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0016320 // endoplasmic reticulum membrane fusion // inferred from mutant phenotype","0005635 // nuclear envelope // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // traceable author statement /// 0031201 // SNARE complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr5:172571444-172591390 (+) // 98.65 // q35.1"]
["11722906_a_at",0.20076084,0.014557838,-0.014557838,0.0752573,-0.12338352,-0.18027878,0.5545955,0.23608641,1.1042411,0.14305525,1.1042411,"up","MIA3",375056,"0002687 // positive regulation of leukocyte migration // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from mutant phenotype /// 0006887 // exocytosis // inferred from electronic annotation /// 0007162 // negative regulation of cell adhesion // inferred from direct assay /// 0015031 // protein transport // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from direct assay /// 0042060 // wound healing // inferred from direct assay","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:222791443-222841513 (+) // 99.64 // q41"]
["11751213_s_at",0.33763218,0.13118267,0.2780571,-0.27998543,-0.13118267,-0.28588295,0.07397246,0.0037618955,1.3960085,0.48130772,1.3960085,"up","SCOC",60592,"0016239 // positive regulation of macroautophagy // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr4:141300272-141303304 (+) // 89.82 // q31.1"]
["11762808_at",-0.07232618,-0.0063266754,-0.1934905,0.0063266754,0.13125277,0.0616498,0.31434315,0.07489408,-1.1150622,-0.15712424,1.1150622,"down","MPZL1",9019,"0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement","0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005198 // structural molecule activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr1:167691232-167743131 (+) // 80.63 // q24.2"]
["11755213_a_at",-0.047610283,-0.21233368,-0.22860241,0.31770515,0.08590984,0.047610283,0.22164665,0.037558526,-1.2425098,-0.31325728,1.2425098,"down","KIAA1522",57648,"","","","chr1:33231267-33240571 (+) // 99.28 // p35.1"]
["11730065_at",0.04088497,-0.2532835,0.05125332,-0.25788593,-0.0072484016,0.0072484016,0.93361646,0.818762,1.0226035,0.032246884,1.0226035,"up","TIGD7",91151,"","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation","chr16:3348829-3351400 (-) // 85.37 // p13.3"]
["11729063_a_at",-0.036478043,0.00022697449,-0.00022697449,0.13664532,0.116788864,-0.002986908,0.36804885,0.10221422,-1.0685406,-0.09564169,1.0685406,"down","PDGFA",5154,"0001525 // angiogenesis // inferred from sequence or structural similarity /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001775 // cell activation // traceable author statement /// 0001942 // hair follicle development // inferred from sequence or structural similarity /// 0001942 // hair follicle development // inferred from electronic annotation /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from sequence or structural similarity /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0002576 // platelet degranulation // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009611 // response to wounding // inferred from direct assay /// 0009790 // embryo development // traceable author statement /// 0009887 // organ morphogenesis // inferred from sequence or structural similarity /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010035 // response to inorganic substance // inferred from electronic annotation /// 0010512 // negative regulation of phosphatidylinositol biosynthetic process // inferred from direct assay /// 0010544 // negative regulation of platelet activation // inferred from direct assay /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // inferred from direct assay /// 0014910 // regulation of smooth muscle cell migration // inferred from direct assay /// 0030031 // cell projection assembly // inferred from sequence or structural similarity /// 0030031 // cell projection assembly // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from sequence or structural similarity /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0031954 // positive regulation of protein autophosphorylation // inferred from direct assay /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from electronic annotation /// 0032956 // regulation of actin cytoskeleton organization // traceable author statement /// 0035793 // positive regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway // inferred from direct assay /// 0042060 // wound healing // traceable author statement /// 0042060 // wound healing // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0043410 // positive regulation of MAPK cascade // inferred from mutant phenotype /// 0043588 // skin development // inferred from sequence or structural similarity /// 0043588 // skin development // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from direct assay /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from direct assay /// 0048146 // positive regulation of fibroblast proliferation // inferred from direct assay /// 0048286 // lung alveolus development // inferred from sequence or structural similarity /// 0048286 // lung alveolus development // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0050730 // regulation of peptidyl-tyrosine phosphorylation // inferred from sequence or structural similarity /// 0050730 // regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050919 // negative chemotaxis // inferred from direct assay /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from direct assay /// 0060683 // regulation of branching involved in salivary gland morphogenesis by epithelial-mesenchymal signaling // inferred from sequence or structural similarity /// 0060683 // regulation of branching involved in salivary gland morphogenesis by epithelial-mesenchymal signaling // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0072124 // regulation of glomerular mesangial cell proliferation // inferred from direct assay /// 2000278 // regulation of DNA biosynthetic process // inferred from direct assay","0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005902 // microvillus // inferred from sequence or structural similarity /// 0005902 // microvillus // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031093 // platelet alpha granule lumen // traceable author statement","0005161 // platelet-derived growth factor receptor binding // inferred from direct assay /// 0005161 // platelet-derived growth factor receptor binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from direct assay /// 0008083 // growth factor activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043498 // cell surface binding // inferred from direct assay /// 0043499 // eukaryotic cell surface binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0048407 // platelet-derived growth factor binding // inferred from physical interaction","chr7:536898-559481 (-) // 88.1 // p22.3"]
["11761388_at",-0.30133724,-0.02698183,-0.2981515,0.02698183,0.03526163,0.14090586,0.25084165,0.047798343,-1.2112863,-0.2765399,1.2112863,"down","COQ2",27235,"0006071 // glycerol metabolic process // inferred from genetic interaction /// 0006744 // ubiquinone biosynthetic process // inferred from direct assay /// 0006744 // ubiquinone biosynthetic process // inferred from electronic annotation /// 0008299 // isoprenoid biosynthetic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation","0005739 // mitochondrion // inferred from reviewed computational analysis /// 0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from reviewed computational analysis /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","0002083 // 4-hydroxybenzoate decaprenyltransferase activity // inferred from electronic annotation /// 0004659 // prenyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0047293 // 4-hydroxybenzoate nonaprenyltransferase activity // inferred from electronic annotation","chr4:84182688-84205948 (-) // 81.69 // q21.23"]
["11750288_x_at",0.13839245,0.14257765,0.05099535,-0.05099511,-0.07977891,-0.07874656,0.079069175,0.004491895,1.1332729,0.18049529,1.1332729,"up","DYX1C1",161582,"0001764 // neuron migration // inferred from sequence or structural similarity /// 0001764 // neuron migration // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0033146 // regulation of intracellular estrogen receptor signaling pathway // inferred from direct assay /// 0061136 // regulation of proteasomal protein catabolic process // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0030331 // estrogen receptor binding // inferred from direct assay /// 0030331 // estrogen receptor binding // inferred from electronic annotation","chr15:55727101-55790546 (-) // 59.95 // q21.3"]
["11755839_x_at",-0.26014876,-0.15223646,0.4253261,0.12808037,0.047016144,-0.047016144,0.9536414,0.8692374,-1.0269599,-0.038379844,1.0269599,"down","KIAA1244",57221,"0010923 // negative regulation of phosphatase activity // inferred from direct assay /// 0016192 // vesicle-mediated transport // not recorded /// 0032012 // regulation of ARF protein signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005802 // trans-Golgi network // not recorded /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005086 // ARF guanyl-nucleotide exchange factor activity // not recorded /// 0005086 // ARF guanyl-nucleotide exchange factor activity // inferred from electronic annotation","chr6:138655488-138659955 (+) // 89.49 // q23.3"]
["11716797_s_at",-0.09730339,-0.001996994,-0.009077072,0.094400406,0.18749619,0.001996994,0.36662915,0.10144398,-1.0948681,-0.13075703,1.0948681,"down","LBR",3930,"0006695 // cholesterol biosynthetic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005639 // integral to nuclear inner membrane // traceable author statement /// 0005643 // nuclear pore // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005521 // lamin binding // traceable author statement /// 0016628 // oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0070087 // chromo shadow domain binding // inferred from physical interaction","chr1:225589203-225615781 (-) // 98.03 // q42.12"]
["11739323_a_at",-0.25173903,-0.066274166,0.06453848,-0.064538956,0.10887146,0.22116518,0.5530639,0.23481844,-1.1273932,-0.17299083,1.1273932,"down","WDR4",10785,"0006400 // tRNA modification // inferred from direct assay /// 0008033 // tRNA processing // inferred from electronic annotation /// 0036265 // RNA (guanine-N7)-methylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008176 // tRNA (guanine-N7-)-methyltransferase activity // inferred from direct assay","chr21:44269070-44299685 (-) // 86.6 // q22.3"]
["11728501_a_at",0.31559896,0.18478775,0.15864706,-0.33848143,-0.15864706,-0.17412901,0.07697279,0.004154458,1.3598338,0.44343036,1.3598338,"up","LRRN2",10446,"0007155 // cell adhesion // traceable author statement /// 0007165 // signal transduction // traceable author statement","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // traceable author statement","chr1:204586300-204654930 (-) // 98.71 // q32.1"]
["11747870_a_at",0.4285574,-0.086564064,0.111029625,0.086564064,-0.16627693,-0.21295023,0.5495388,0.23191994,1.1880224,0.24856201,1.1880224,"up","MLLT3",4300,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007379 // segment specification // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from direct assay /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from genetic interaction /// 2000096 // positive regulation of Wnt receptor signaling pathway, planar cell polarity pathway // inferred from genetic interaction","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr9:20346196-20621883 (-) // 90.85 // p21.3"]
["11753277_a_at",0,-0.05057001,0.10443807,0.024781227,0,-0.024781704,0.8938104,0.72640413,1.012524,0.017956117,1.012524,"up","AKR1E2",83592,"0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0016491 // oxidoreductase activity // inferred from electronic annotation /// 0050571 // 1,5-anhydro-D-fructose reductase activity // inferred from electronic annotation","chr10:4868487-4889937 (+) // 97.2 // p15.1"]
["11752283_a_at",-0.014417887,-0.22683358,0.014417887,-0.31443858,0.07945967,0.11143398,0.9410479,0.8367972,-1.0241518,-0.03442957,1.0241518,"down","ALOX15B",247,"0006629 // lipid metabolic process // traceable author statement /// 0006631 // fatty acid metabolic process // traceable author statement /// 0006691 // leukotriene metabolic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0019370 // leukotriene biosynthetic process // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // traceable author statement /// 0030850 // prostate gland development // non-traceable author statement /// 0030856 // regulation of epithelial cell differentiation // non-traceable author statement /// 0045786 // negative regulation of cell cycle // inferred from direct assay /// 0045926 // negative regulation of growth // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005622 // intracellular // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005506 // iron ion binding // inferred from electronic annotation /// 0016165 // lipoxygenase activity // inferred from electronic annotation /// 0016165 // lipoxygenase activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050473 // arachidonate 15-lipoxygenase activity // inferred from direct assay /// 0050473 // arachidonate 15-lipoxygenase activity // inferred from electronic annotation","chr17:7942351-7952162 (+) // 99.83 // p13.1"]
["11743009_x_at",0.1053524,0.11653328,-0.0074038506,-0.053073883,-0.06567907,0.0074038506,0.3157463,0.07565255,1.0781891,0.10861027,1.0781891,"up","ARHGEF1",9138,"0007266 // Rho protein signal transduction // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0038032 // termination of G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050770 // regulation of axonogenesis // traceable author statement /// 0050771 // negative regulation of axonogenesis // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // traceable author statement /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation","chr19:42388357-42411597 (+) // 96.03 // q13.2"]
["11742077_at",-0.20238113,0.11101961,0.021407604,-0.28080177,-0.021407604,0.22711277,0.99724376,0.99260026,1.0011889,0.0017141642,1.0011889,"up","CHRNG",1146,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007268 // synaptic transmission // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0005892 // acetylcholine-gated channel complex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004889 // acetylcholine-activated cation-selective channel activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0015267 // channel activity // traceable author statement /// 0015276 // ligand-gated ion channel activity // inferred from electronic annotation /// 0015464 // acetylcholine receptor activity // traceable author statement","chr2:233404436-233412546 (+) // 88.91 // q37.1"]
["11733067_at",0.17900753,0.10369778,-0.01665783,-0.25306368,0.01665783,-0.04352522,0.4327329,0.14181344,1.1344498,0.18199281,1.1344498,"up","NFYB",4801,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0016602 // CCAAT-binding factor complex // inferred from direct assay","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0070491 // repressing transcription factor binding // inferred from physical interaction","chr12:104510857-104532067 (-) // 77.06 // q23.3"]
["11735358_at",0.025146961,0.06656265,-0.062480927,0.032196045,-0.056520462,-0.025146961,0.8303402,0.599454,1.0183499,0.026233329,1.0183499,"up","VAX2",25806,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007398 // ectoderm development // traceable author statement /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007601 // visual perception // traceable author statement /// 0009950 // dorsal/ventral axis specification // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0030900 // forebrain development // inferred from sequence or structural similarity /// 0030900 // forebrain development // inferred from electronic annotation /// 0043010 // camera-type eye development // inferred from electronic annotation /// 0048048 // embryonic eye morphogenesis // inferred from electronic annotation /// 0060041 // retina development in camera-type eye // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000976 // transcription regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0031490 // chromatin DNA binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr2:71127719-71160576 (+) // 95.02 // p13.3"]
["11745152_x_at",0.15778255,-0.1481514,-0.1660223,0.044133186,0.036319733,-0.036319733,0.81331575,0.5700335,-1.047421,-0.0668414,1.047421,"down","ARFGAP1",55738,"0006810 // transport // inferred from electronic annotation /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0032312 // regulation of ARF GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from direct assay /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0048205 // COPI coating of Golgi vesicle // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0030660 // Golgi-associated vesicle membrane // traceable author statement","0005096 // GTPase activator activity // inferred from direct assay /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0008060 // ARF GTPase activator activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:61904184-61921140 (+) // 99.06 // q13.33"]
["11745992_a_at",0.09257507,0.059613228,0.032611847,-0.032611847,-0.10039234,-0.23277569,0.22967286,0.040145673,1.1356566,0.18352665,1.1356566,"up","ATG5",9474,"0000045 // autophagic vacuole assembly // inferred from sequence or structural similarity /// 0000045 // autophagic vacuole assembly // inferred from electronic annotation /// 0001974 // blood vessel remodeling // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0006914 // autophagy // inferred from sequence or structural similarity /// 0006915 // apoptotic process // inferred from electronic annotation /// 0031397 // negative regulation of protein ubiquitination // inferred from electronic annotation /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0042311 // vasodilation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043687 // post-translational protein modification // inferred from sequence or structural similarity /// 0043687 // post-translational protein modification // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0048840 // otolith development // inferred from electronic annotation /// 0055015 // ventricular cardiac muscle cell development // inferred from electronic annotation /// 0060047 // heart contraction // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005776 // autophagic vacuole // inferred from direct assay /// 0005776 // autophagic vacuole // inferred from electronic annotation /// 0034045 // pre-autophagosomal structure membrane // inferred from sequence or structural similarity /// 0034045 // pre-autophagosomal structure membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr6:106632365-106773695 (-) // 95.77 // q21"]
["11758775_at",-0.029093266,0.06487751,0.024317265,0.0006723404,-0.0025968552,-0.00067186356,0.76169735,0.48554587,1.0145917,0.020899255,1.0145917,"up","SRPRB",58477,"0006412 // translation // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr3:133502876-133540336 (+) // 90.35 // q22.1"]
["11739057_a_at",0.1262188,-0.07926941,-0.059869766,0.35482597,0.039411545,-0.039411545,0.717719,0.42181158,-1.0886816,-0.12258205,1.0886816,"down","NFE2L2",4780,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0030194 // positive regulation of blood coagulation // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // inferred from electronic annotation /// 0034599 // cellular response to oxidative stress // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0045995 // regulation of embryonic development // inferred from electronic annotation /// 2000121 // regulation of removal of superoxide radicals // inferred from electronic annotation /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from electronic annotation","0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr2:178095035-178129057 (-) // 98.88 // q31.2"]
["11763024_a_at",0.095650434,0.094840765,-0.027752161,0.027752161,-0.043194532,-0.12906718,0.4706977,0.16915385,1.07357,0.10241628,1.07357,"up","OFCC1",266553,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","","chr6:9769163-9939582 (-) // 84.75 // p24.3"]
["11718148_a_at",0.14978695,0.019524574,-0.2127943,0.4099598,-0.045687675,-0.019524574,0.7820264,0.51596594,-1.0938463,-0.12941006,1.0938463,"down","APH1A",51107,"0001656 // metanephros development // inferred from electronic annotation /// 0006509 // membrane protein ectodomain proteolysis // inferred from direct assay /// 0006915 // apoptotic process // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007220 // Notch receptor processing // inferred from mutant phenotype /// 0007220 // Notch receptor processing // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0016485 // protein processing // inferred from direct assay /// 0016485 // protein processing // inferred from electronic annotation /// 0031293 // membrane protein intracellular domain proteolysis // inferred from mutant phenotype /// 0031293 // membrane protein intracellular domain proteolysis // traceable author statement /// 0042987 // amyloid precursor protein catabolic process // inferred from mutant phenotype /// 0042987 // amyloid precursor protein catabolic process // traceable author statement /// 0043085 // positive regulation of catalytic activity // inferred from direct assay /// 0043085 // positive regulation of catalytic activity // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0004175 // endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:150237803-150241532 (-) // 96.1 // q21.2"]
["11748951_a_at",0.23286247,-0.082271576,-0.03325653,0.1069355,0.03325653,-0.11459541,0.92872405,0.8076636,1.0214221,0.030579247,1.0214221,"up","CTNNB1",1499,{"$cut":{"chars":18470,"head":"0000122 // negative regulation of transcription from RNA polymerase II promoter // not recorded /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000578 // embryonic axis specification // not recorded /// 0000578 // embryonic axis specification // inferred from electronic annotation /// 0000904 // cell morphogenesis involved in differentiation // inferred from electronic annotation /// 0001501 // skeletal system development // inferred from electronic annotation /// 0001569 // patterning of blood vessels // not recorded /// 0001569 // patterning of blood vessels // inferred by curator /// 0001569 // patterning of blood vessels // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0001658 // branching involved in ureteric bud morphogenesis // not recorded /// 0001658 // branching involved in ureteric bud morphogenesis // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001702 // gastrulation with mouth forming second // not recorded /// 0001702 // gastrulation with mouth forming second // inferred from electronic annotation /// 0001706 // endoderm formation // inferred from electronic annotation /// 0001708 // cell fate specification // inferred from electronic annotation /// 0001709 // cell fate determination // inferred from electronic annotation /// 0001711 // endodermal cell fate commitment // not recorded /// 0001711 // endodermal cell fate commitment // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001837 // epithelial to mesenchymal transition // traceable author statement /// 0001889 // liver development // not recorded /// 0001889 // liver development // inferred from electronic annotation /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0002089 // lens morphogenesis in camera-type eye // inferred from electronic annotation /// 0003136 // negative regulation of heart induction by canonical Wnt receptor signaling pathway // not recorded /// 0003266 // regulation of secondary heart field cardioblast proliferation // inferred from electronic annotation /// 0003337 // mesenchymal to epithelial transition involved in metanephros morphogenesis // not recorded /// 0003337 // mesenchymal to epithelial transition involved in metanephros morphogenesis // inferred from electronic annotation /// 0003338 // metanephros morphogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0007016 // cytoskeletal anchoring at plasma membrane // not recorded /// 0007155 // cell adhesion // inferred from mutant phenotype /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // not recorded /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007398 // ectoderm development // not recorded /// 0007398 // ectoderm development // inferred from electronic annotation /// 0007403 // glial cell fate determination // not recorded /// 0007403 // glial cell fate determination // inferred from electronic annotation /// 0007494 // midgut development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008284 /"}},"0000922 // spindle pole // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from direct assay /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005912 // adherens junction // inferred from direct assay /// 0005912 // adherens junction // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from direct assay /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0005915 // zonula adherens // not recorded /// 0005916 // fascia adherens // not recorded /// 0005916 // fascia adherens // inferred from electronic annotation /// 0005924 // cell-substrate adherens junction // inferred from direct assay /// 0005938 // cell cortex // inferred from direct assay /// 0009898 // internal side of plasma membrane // not recorded /// 0016020 // membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016328 // lateral plasma membrane // inferred from direct assay /// 0016328 // lateral plasma membrane // inferred from electronic annotation /// 0016342 // catenin complex // inferred from direct assay /// 0030018 // Z disc // not recorded /// 0030018 // Z disc // inferred from electronic annotation /// 0030027 // lamellipodium // not recorded /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0030054 // cell junction // traceable author statement /// 0030054 // cell junction // inferred from electronic annotation /// 0030057 // desmosome // not recorded /// 0031253 // cell projection membrane // inferred from electronic annotation /// 0031528 // microvillus membrane // not recorded /// 0031528 // microvillus membrane // inferred from electronic annotation /// 0032993 // protein-DNA complex // inferred from direct assay /// 0034742 // APC-Axin-1-beta-catenin complex // inferred from direct assay /// 0034747 // Axin-APC-beta-catenin-GSK3B complex // inferred from direct assay /// 0034747 // Axin-APC-beta-catenin-GSK3B complex // inferred from electronic annotation /// 0034750 // Scrib-APC-beta-catenin complex // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043198 // dendritic shaft // not recorded /// 0043198 // dendritic shaft // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0043296 // apical junction complex // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation /// 0045202 // synapse // not recorded /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0070369 // beta-catenin-TCF7L2 complex // inferred from direct assay /// 0071944 // cell periphery // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0004871 // signal transducer activity // non-traceable author statement /// 0005198 // structural molecule activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008134 // transcription factor binding // traceable author statement /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019900 // kinase binding // inferred from physical interaction /// 0019901 // protein kinase binding // not recorded /// 0019903 // protein phosphatase binding // inferred from physical interaction /// 0019903 // protein phosphatase binding // inferred from electronic annotation /// 0030331 // estrogen receptor binding // inferred from physical interaction /// 0035255 // ionotropic glutamate receptor binding // inferred from electronic annotation /// 0035257 // nuclear hormone receptor binding // inferred from physical interaction /// 0035257 // nuclear hormone receptor binding // traceable author statement /// 0042153 // RPTP-like protein binding // not recorded /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0044325 // ion channel binding // inferred from physical interaction /// 0045294 // alpha-catenin binding // inferred from physical interaction /// 0045294 // alpha-catenin binding // inferred from electronic annotation /// 0045296 // cadherin binding // inferred from physical interaction /// 0045296 // cadherin binding // inferred from electronic annotation /// 0046332 // SMAD binding // inferred from physical interaction /// 0050681 // androgen receptor binding // non-traceable author statement /// 0070411 // I-SMAD binding // inferred from physical interaction /// 0070412 // R-SMAD binding // inferred from physical interaction /// 0070491 // repressing transcription factor binding // inferred from electronic annotation","chr3:41236400-41281375 (+) // 98.36 // p22.1"]
["11716993_a_at",-0.37439442,-0.057275772,0.08421421,-0.1560421,0.057275772,0.21196508,0.71910256,0.4237457,-1.1123043,-0.15355156,1.1123043,"down","CSF1R",1436,"0001934 // positive regulation of protein phosphorylation // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from sequence or structural similarity /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0008283 // cell proliferation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from mutant phenotype /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from mutant phenotype /// 0030097 // hemopoiesis // inferred from mutant phenotype /// 0030224 // monocyte differentiation // traceable author statement /// 0030225 // macrophage differentiation // traceable author statement /// 0030316 // osteoclast differentiation // inferred from sequence or structural similarity /// 0030316 // osteoclast differentiation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from sequence or structural similarity /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031529 // ruffle organization // inferred from sequence or structural similarity /// 0031529 // ruffle organization // inferred from electronic annotation /// 0036006 // cellular response to macrophage colony-stimulating factor stimulus // inferred from mutant phenotype /// 0036006 // cellular response to macrophage colony-stimulating factor stimulus // inferred from electronic annotation /// 0038145 // macrophage colony-stimulating factor signaling pathway // inferred from mutant phenotype /// 0038145 // macrophage colony-stimulating factor signaling pathway // traceable author statement /// 0038145 // macrophage colony-stimulating factor signaling pathway // inferred from electronic annotation /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from sequence or structural similarity /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation /// 0045124 // regulation of bone resorption // inferred from sequence or structural similarity /// 0045217 // cell-cell junction maintenance // inferred from mutant phenotype /// 0046488 // phosphatidylinositol metabolic process // inferred from sequence or structural similarity /// 0046488 // phosphatidylinositol metabolic process // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048015 // phosphatidylinositol-mediated signaling // inferred from sequence or structural similarity /// 0048015 // phosphatidylinositol-mediated signaling // inferred from electronic annotation /// 0060603 // mammary gland duct morphogenesis // traceable author statement /// 0061098 // positive regulation of protein tyrosine kinase activity // inferred from mutant phenotype /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from sequence or structural similarity /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from electronic annotation /// 0071345 // cellular response to cytokine stimulus // inferred from sequence or structural similarity /// 0071345 // cellular response to cytokine stimulus // inferred from electronic annotation /// 0071902 // positive regulation of protein serine/threonine kinase activity // inferred from sequence or structural similarity /// 0071902 // positive regulation of protein serine/threonine kinase activity // inferred from electronic annotation /// 0090197 // positive regulation of chemokine secretion // inferred from mutant phenotype /// 2000147 // positive regulation of cell motility // inferred from mutant phenotype /// 2000249 // regulation of actin cytoskeleton reorganization // inferred from sequence or structural similarity /// 2000249 // regulation of actin cytoskeleton reorganization // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from sequence or structural similarity /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043235 // receptor complex // inferred from sequence or structural similarity /// 0043235 // receptor complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005011 // macrophage colony-stimulating factor receptor activity // inferred from mutant phenotype /// 0005011 // macrophage colony-stimulating factor receptor activity // inferred from electronic annotation /// 0005011 // macrophage colony-stimulating factor receptor activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019955 // cytokine binding // inferred from direct assay /// 0019955 // cytokine binding // inferred from sequence or structural similarity /// 0019955 // cytokine binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr5:149432590-149492935 (-) // 96.39 // q32"]
["11723674_x_at",-0.03921795,-0.08141565,0.0817256,-0.13607073,0.10823679,0.039217472,0.94875336,0.85759467,-1.0116876,-0.01676392,1.0116876,"down","PSEN2",5664,"0001666 // response to hypoxia // inferred from electronic annotation /// 0001708 // cell fate specification // inferred from electronic annotation /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001933 // negative regulation of protein phosphorylation // inferred from electronic annotation /// 0001942 // hair follicle development // inferred from electronic annotation /// 0002244 // hemopoietic progenitor cell differentiation // inferred from electronic annotation /// 0002286 // T cell activation involved in immune response // inferred from electronic annotation /// 0002573 // myeloid leukocyte differentiation // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006509 // membrane protein ectodomain proteolysis // inferred from direct assay /// 0006816 // calcium ion transport // not recorded /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // not recorded /// 0007176 // regulation of epidermal growth factor-activated receptor activity // inferred from electronic annotation /// 0007219 // Notch signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007220 // Notch receptor processing // not recorded /// 0007220 // Notch receptor processing // traceable author statement /// 0007611 // learning or memory // inferred from electronic annotation /// 0007613 // memory // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0009790 // embryo development // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016485 // protein processing // inferred from direct assay /// 0016485 // protein processing // inferred from electronic annotation /// 0021904 // dorsal/ventral neural tube patterning // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0031293 // membrane protein intracellular domain proteolysis // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0040011 // locomotion // inferred from electronic annotation /// 0042640 // anagen // inferred from electronic annotation /// 0042987 // amyloid precursor protein catabolic process // not recorded /// 0042987 // amyloid precursor protein catabolic process // traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // inferred from direct assay /// 0044267 // cellular protein metabolic process // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0048286 // lung alveolus development // inferred from electronic annotation /// 0048538 // thymus development // inferred from electronic annotation /// 0048854 // brain morphogenesis // inferred from electronic annotation /// 0050435 // beta-amyloid metabolic process // not recorded /// 0050435 // beta-amyloid metabolic process // inferred from electronic annotation /// 0050820 // positive regulation of coagulation // inferred from electronic annotation /// 0050852 // T cell receptor signaling pathway // inferred from electronic annotation /// 0051604 // protein maturation // inferred from electronic annotation /// 0060048 // cardiac muscle contraction // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005637 // nuclear inner membrane // inferred from direct assay /// 0005743 // mitochondrial inner membrane // not recorded /// 0005765 // lysosomal membrane // not recorded /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0005938 // cell cortex // not recorded /// 0009986 // cell surface // not recorded /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // not recorded /// 0030018 // Z disc // not recorded /// 0030018 // Z disc // inferred from electronic annotation /// 0030424 // axon // not recorded /// 0030426 // growth cone // not recorded /// 0031594 // neuromuscular junction // not recorded /// 0035253 // ciliary rootlet // not recorded /// 0043025 // neuronal cell body // not recorded /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043198 // dendritic shaft // not recorded /// 0043234 // protein complex // inferred from direct assay /// 0045121 // membrane raft // not recorded /// 0048471 // perinuclear region of cytoplasm // not recorded","0004175 // endopeptidase activity // not recorded /// 0004175 // endopeptidase activity // inferred from electronic annotation /// 0004190 // aspartic-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr1:227058272-227084269 (+) // 92.45 // q42.13"]
["11743044_a_at",0.18808746,-0.023484707,-0.12701249,-0.06670427,0.023484707,0.03486705,0.95913225,0.88355047,1.0106716,0.015314317,1.0106716,"up","ALDH1A1",216,"0006069 // ethanol oxidation // traceable author statement /// 0006081 // cellular aldehyde metabolic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0032320 // positive regulation of Ras GTPase activity // traceable author statement /// 0042572 // retinol metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0001758 // retinal dehydrogenase activity // inferred from electronic annotation /// 0004029 // aldehyde dehydrogenase (NAD) activity // not recorded /// 0004029 // aldehyde dehydrogenase (NAD) activity // traceable author statement /// 0005099 // Ras GTPase activator activity // traceable author statement /// 0005497 // androgen binding // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016620 // oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor // inferred from electronic annotation","chr9:75515586-75653638 (-) // 96.83 // q21.13"]
["11760701_x_at",-0.17899275,-0.03368163,0.13092113,0.090506315,-0.031732082,0.031732082,0.8206109,0.5828386,-1.040603,-0.05741983,1.040603,"down","LSAMP",4045,"0007155 // cell adhesion // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr3:115528291-116163804 (-) // 79.83 // q13.31"]
["11724204_s_at",-0.1000185,-0.10006142,-0.121738434,0.23478699,0.2969818,0.1000185,0.088328116,0.005593488,-1.2464876,-0.31786856,1.2464876,"down","SNRPD1",6632,"0000245 // spliceosomal complex assembly // traceable author statement /// 0000387 // spliceosomal snRNP assembly // traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0034660 // ncRNA metabolic process // traceable author statement","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005689 // U12-type spliceosomal complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030532 // small nuclear ribonucleoprotein complex // traceable author statement /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr18:19192227-19210414 (+) // 74.99 // q11.2"]
["11756599_a_at",0.04955387,0.006620407,0.004193306,-0.028424263,-0.004193306,-0.024474144,0.31853756,0.07698738,1.0275105,0.03915317,1.0275105,"up","ANAPC16",119504,"0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005680 // anaphase-promoting complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","","chr10:73920573-73993393 (+) // 65.06 // q22.1"]
["11730004_a_at",-0.13683939,0.02397728,0.032933235,-0.2839961,-0.02397728,0.16752625,0.96256757,0.89389485,1.0140809,0.020172725,1.0140809,"up","SEMA4D",10507,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0006916 // anti-apoptosis // traceable author statement /// 0006955 // immune response // traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0008360 // regulation of cell shape // inferred from mutant phenotype /// 0010693 // negative regulation of alkaline phosphatase activity // inferred from mutant phenotype /// 0010693 // negative regulation of alkaline phosphatase activity // inferred from electronic annotation /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // inferred from mutant phenotype /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from sequence or structural similarity /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031344 // regulation of cell projection organization // inferred from mutant phenotype /// 0032321 // positive regulation of Rho GTPase activity // inferred from mutant phenotype /// 0032321 // positive regulation of Rho GTPase activity // inferred from sequence or structural similarity /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0043931 // ossification involved in bone maturation // inferred from mutant phenotype /// 0043931 // ossification involved in bone maturation // inferred from electronic annotation /// 0045668 // negative regulation of osteoblast differentiation // inferred from sequence or structural similarity /// 0045668 // negative regulation of osteoblast differentiation // inferred from electronic annotation /// 0048672 // positive regulation of collateral sprouting // inferred from mutant phenotype /// 0048814 // regulation of dendrite morphogenesis // inferred from mutant phenotype /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from sequence or structural similarity /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050732 // negative regulation of peptidyl-tyrosine phosphorylation // inferred from sequence or structural similarity /// 0050732 // negative regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050772 // positive regulation of axonogenesis // inferred from electronic annotation /// 0061383 // trabecula morphogenesis // inferred from sequence or structural similarity /// 0061383 // trabecula morphogenesis // inferred from electronic annotation /// 0070486 // leukocyte aggregation // inferred from mutant phenotype /// 0071526 // semaphorin-plexin signaling pathway // inferred from mutant phenotype","0005615 // extracellular space // inferred from sequence or structural similarity /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from mutant phenotype /// 0005102 // receptor binding // inferred from direct assay /// 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030215 // semaphorin receptor binding // inferred from sequence or structural similarity /// 0030215 // semaphorin receptor binding // inferred from electronic annotation","chr9:91975705-92070868 (-) // 94.33 // q22.2"]
["11761598_s_at",-0.004162073,-0.034587383,-0.015214205,0.24638033,0.42137885,0.004162073,0.39336404,0.11678679,-1.1825995,-0.24196163,1.1825995,"down","HEATR8",374977,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:55118561-55165896 (+) // 95.65 // p32.3"]
["11747790_a_at",-0.07359791,-0.037783146,-0.06869364,0.037783623,0.1925745,0.21250153,0.16689132,0.021106794,-1.1548014,-0.20764472,1.1548014,"down","C22orf25",128989,"","0005739 // mitochondrion // inferred from electronic annotation","","chr22:20008650-20052360 (+) // 94.53 // q11.21"]
["11731680_a_at",-0.13375115,0.022625446,0.07080436,-0.0493443,-0.01276207,0.01276207,0.9881917,0.96494484,1.0020869,0.003007591,1.0020869,"up","NOX4",50507,"0000902 // cell morphogenesis // inferred from sequence or structural similarity /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0007569 // cell aging // inferred from sequence or structural similarity /// 0007569 // cell aging // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0035051 // cardiac cell differentiation // inferred from electronic annotation /// 0042554 // superoxide anion generation // inferred from sequence or structural similarity /// 0042554 // superoxide anion generation // inferred from electronic annotation /// 0043406 // positive regulation of MAP kinase activity // inferred from electronic annotation /// 0045453 // bone resorption // inferred from electronic annotation /// 0050667 // homocysteine metabolic process // inferred from direct assay /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0072593 // reactive oxygen species metabolic process // inferred from direct assay /// 0072593 // reactive oxygen species metabolic process // inferred from electronic annotation /// 2000573 // positive regulation of DNA biosynthetic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0071944 // cell periphery // inferred from electronic annotation","0000166 // nucleotide binding // traceable author statement /// 0009055 // electron carrier activity // traceable author statement /// 0016174 // NAD(P)H oxidase activity // traceable author statement /// 0016175 // superoxide-generating NADPH oxidase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0019826 // oxygen sensor activity // traceable author statement /// 0020037 // heme binding // traceable author statement /// 0050660 // flavin adenine dinucleotide binding // traceable author statement /// 0072341 // modified amino acid binding // inferred from direct assay","chr11:89057523-89225390 (-) // 73.38 // q14.3"]
["11742852_a_at",0.33900166,-0.0065374374,0.0065374374,0.2438755,-0.023180962,-0.010229111,0.91653657,0.7788342,1.0301436,0.042845488,1.0301436,"up","RPN1",6184,"0006412 // translation // traceable author statement /// 0006464 // cellular protein modification process // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from sequence or structural similarity /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0008250 // oligosaccharyltransferase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019718 // rough microsome // inferred from sequence or structural similarity /// 0042470 // melanosome // inferred from electronic annotation","0004579 // dolichyl-diphosphooligosaccharide-protein glycotransferase activity // traceable author statement /// 0004579 // dolichyl-diphosphooligosaccharide-protein glycotransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr3:128338811-128369748 (-) // 95.85 // q21.3"]
["11718032_a_at",0.47731686,0.016792297,0.038765907,-0.016792774,-0.25272036,-0.20970201,0.38654068,0.11285939,1.2634455,0.33736342,1.2634455,"up","ATP6V0A1",535,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0033572 // transferrin transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0000220 // vacuolar proton-transporting V-type ATPase, V0 domain // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0033177 // proton-transporting two-sector ATPase complex, proton-transporting domain // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation /// 0051117 // ATPase binding // inferred from physical interaction","chr17:40610862-40674597 (+) // 93.48 // q21.2"]
["11763766_x_at",0.20207644,-0.3293538,0.08666086,-0.47362137,-0.08666086,0.20207644,0.88042486,0.6978915,1.076138,0.105863124,1.076138,"up","STYXL1",51657,"0006470 // protein dephosphorylation // not recorded /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0035556 // intracellular signal transduction // traceable author statement","0005622 // intracellular // traceable author statement","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // not recorded /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr7:75633075-75677283 (-) // 43.87 // q11.23"]
["11716357_a_at",-0.047466278,-0.25429726,0.17669344,-0.14400673,0.1343627,0.047466278,0.897498,0.73426944,-1.0383533,-0.054297436,1.0383533,"down","AHSG",197,"0001501 // skeletal system development // non-traceable author statement /// 0001503 // ossification // inferred from electronic annotation /// 0006907 // pinocytosis // non-traceable author statement /// 0006953 // acute-phase response // inferred from direct assay /// 0008584 // male gonad development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from electronic annotation /// 0030500 // regulation of bone mineralization // non-traceable author statement /// 0030500 // regulation of bone mineralization // inferred from electronic annotation /// 0030502 // negative regulation of bone mineralization // inferred from sequence or structural similarity /// 0030502 // negative regulation of bone mineralization // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0042326 // negative regulation of phosphorylation // non-traceable author statement /// 0045780 // positive regulation of bone resorption // inferred from electronic annotation /// 0046627 // negative regulation of insulin receptor signaling pathway // non-traceable author statement /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from electronic annotation /// 0050727 // regulation of inflammatory response // inferred from mutant phenotype /// 0050766 // positive regulation of phagocytosis // inferred from direct assay","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // non-traceable author statement /// 0005615 // extracellular space // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0004869 // cysteine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0019210 // kinase inhibitor activity // non-traceable author statement /// 0030294 // receptor signaling protein tyrosine kinase inhibitor activity // inferred from electronic annotation","chr3:186330711-186339107 (+) // 85.14 // q27.3"]
["11735393_at",-0.098042965,0.038998604,0.0073490143,-0.27902412,0.13528252,-0.0073485374,0.92923075,0.80909157,1.0232308,0.033131585,1.0232308,"up","FMR1NB",158521,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chrX:147062852-147108188 (+) // 97.7 // q27.3"]
["11744831_a_at",0.0048561096,-0.0048561096,0.12907219,-0.031430244,0.032422066,-0.018346786,0.6717356,0.36050287,1.0344107,0.048809122,1.0344107,"up","RPAIN",84268,"0006261 // DNA-dependent DNA replication // inferred from physical interaction /// 0006281 // DNA repair // inferred from physical interaction /// 0006310 // DNA recombination // inferred from physical interaction /// 0006606 // protein import into nucleus // inferred from direct assay /// 0009411 // response to UV // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016605 // PML body // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation","0032403 // protein complex binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:5322960-5336205 (+) // 95.3 // p13.2"]
["11716148_a_at",0.0107421875,-0.0107421875,0.044514656,-0.21382809,0.0271101,-0.01832962,0.6496478,0.33318043,1.059356,0.08318745,1.059356,"up","TRAF3IP2",10758,"0035556 // intracellular signal transduction // non-traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern","0005622 // intracellular // non-traceable author statement","0005515 // protein binding // inferred from physical interaction","chr6:111877460-111927477 (-) // 75.15 // q21"]
["11746339_a_at",-0.040988445,0.03593874,-0.121813774,0.09993982,0.027022362,-0.027022362,0.5859342,0.26615256,-1.0538,-0.07560106,1.0538,"down","MTSS1",9788,"0006928 // cellular component movement // non-traceable author statement /// 0007015 // actin filament organization // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0030035 // microspike assembly // non-traceable author statement /// 0030036 // actin cytoskeleton organization // traceable author statement /// 0030041 // actin filament polymerization // inferred from electronic annotation /// 0046847 // filopodium assembly // inferred from electronic annotation /// 0050680 // negative regulation of epithelial cell proliferation // inferred from sequence or structural similarity /// 0061333 // renal tubule morphogenesis // inferred from sequence or structural similarity /// 0071498 // cellular response to fluid shear stress // inferred from sequence or structural similarity /// 0072102 // glomerulus morphogenesis // inferred from sequence or structural similarity /// 0072160 // nephron tubule epithelial cell differentiation // inferred from sequence or structural similarity /// 2001013 // epithelial cell proliferation involved in renal tubule morphogenesis // inferred from sequence or structural similarity","0001726 // ruffle // non-traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0030139 // endocytic vesicle // traceable author statement","0003779 // actin binding // inferred from electronic annotation /// 0003785 // actin monomer binding // inferred from direct assay /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008093 // cytoskeletal adaptor activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation","chr8:125563030-125740379 (-) // 99.93 // q24.13"]
["11751427_a_at",-0.4400053,-0.56072044,-0.46660614,0.5546112,0.4400053,0.53391457,0.014193614,3.9609495e-5,-1.9980892,-0.998621,1.9980892,"down","DNAJB1",3337,"0006457 // protein folding // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // traceable author statement /// 0051085 // chaperone mediated protein folding requiring cofactor // inferred from electronic annotation /// 0070389 // chaperone cofactor-dependent protein refolding // inferred from direct assay","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0031072 // heat shock protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr19:14626066-14629236 (-) // 99.85 // p13.12"]
["11747211_a_at",-0.08539152,0.109742165,-0.019913197,-0.089000225,0.019913197,0.10577774,0.96447504,0.9000791,-1.0074799,-0.010751065,1.0074799,"down","PKD1L1",168507,"0003127 // detection of nodal flow // inferred from sequence or structural similarity /// 0016337 // cell-cell adhesion // non-traceable author statement /// 0060972 // left/right pattern formation // inferred from electronic annotation /// 0070986 // left/right axis specification // inferred from sequence or structural similarity","0016020 // membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0044441 // cilium part // inferred from sequence or structural similarity","","chr7:47848720-47867064 (-) // 87.2 // p12.3"]
["11739818_at",-0.25241756,0.050404787,-0.20239568,-0.016974688,0.01697445,0.26439023,0.45727625,0.1590816,-1.1671038,-0.22293283,1.1671038,"down","C9",735,"0006917 // induction of apoptosis // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0006957 // complement activation, alternative pathway // inferred from electronic annotation /// 0006958 // complement activation, classical pathway // inferred from electronic annotation /// 0007596 // blood coagulation // inferred from electronic annotation /// 0019835 // cytolysis // inferred from electronic annotation /// 0019836 // hemolysis by symbiont of host erythrocytes // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005579 // membrane attack complex // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr5:39284309-39364662 (-) // 89.81 // p13.1"]
["11728787_a_at",-0.02984333,0.20091581,0.08821392,0.02984333,-0.46560717,-0.37310076,0.36113152,0.09861154,1.279917,0.35605025,1.279917,"up","PTPRR",5801,"0001701 // in utero embryonic development // inferred from expression pattern /// 0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005001 // transmembrane receptor protein tyrosine phosphatase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from sequence or structural similarity /// 0019901 // protein kinase binding // inferred from electronic annotation","chr12:71031853-71314623 (-) // 99.05 // q15"]
["11746984_x_at",0.21826315,0.014113903,-0.045772552,0.063446045,-0.12514591,-0.014113903,0.7149809,0.41756797,1.0625073,0.087472714,1.0625073,"up","INTS3",65123,"0006281 // DNA repair // inferred from mutant phenotype /// 0006281 // DNA repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from mutant phenotype /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0010212 // response to ionizing radiation // inferred from mutant phenotype /// 0016180 // snRNA processing // inferred from direct assay /// 0031576 // G2/M transition checkpoint // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0032039 // integrator complex // inferred from direct assay /// 0070876 // SOSS complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr1:153700548-153745994 (+) // 95.81 // q21.3"]
["11749017_a_at",0.24890518,0.03395796,-0.0039491653,0.0039486885,-0.1280961,-0.12651634,0.40125597,0.1215788,1.1301591,0.17652594,1.1301591,"up","CARD14",79092,"0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0007250 // activation of NF-kappaB-inducing kinase activity // non-traceable author statement /// 0042981 // regulation of apoptotic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // non-traceable author statement /// 0016235 // aggresome // inferred from direct assay","0050700 // CARD domain binding // inferred from physical interaction","chr17:78152304-78176428 (+) // 98.86 // q25.3"]
["11744236_a_at",-0.07774782,-0.027976513,0.027976513,-0.039595604,0.10166311,0.058158875,0.59082687,0.27119786,-1.0468041,-0.06599144,1.0468041,"down","DDX60",55601,"0009615 // response to virus // inferred from direct assay /// 0009615 // response to virus // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation /// 1900245 // positive regulation of MDA-5 signaling pathway // inferred from mutant phenotype /// 1900246 // positive regulation of RIG-I signaling pathway // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0003727 // single-stranded RNA binding // inferred from direct assay /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr4:169137444-169239958 (-) // 96.61 // q32.3"]
["11735113_at",-0.20099449,0.1273005,-0.013702631,-0.3562112,0.013702869,0.13709283,0.94012463,0.83416635,1.0276433,0.039339617,1.0276433,"up","PTGER3",5733,"0001660 // fever generation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007200 // phospholipase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0008219 // cell death // traceable author statement /// 0015701 // bicarbonate transport // inferred from electronic annotation /// 0030522 // intracellular receptor mediated signaling pathway // traceable author statement /// 0031622 // positive regulation of fever generation // inferred from sequence or structural similarity /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0035810 // positive regulation of urine volume // inferred from electronic annotation","0005635 // nuclear envelope // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004955 // prostaglandin receptor activity // inferred from electronic annotation /// 0004957 // prostaglandin E receptor activity // inferred from electronic annotation /// 0004957 // prostaglandin E receptor activity // non-traceable author statement /// 0004957 // prostaglandin E receptor activity // traceable author statement","chr1:71471536-71513491 (-) // 95.45 // p31.1"]
["11728342_at",0.44694328,0.20557117,0.2810483,-0.20557117,-0.30607438,-0.3194368,0.053257175,0.0018081239,1.5033855,0.58821505,1.5033855,"up","DCLK1",9201,"0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007417 // central nervous system development // traceable author statement /// 0009615 // response to virus // inferred from expression pattern /// 0016197 // endosomal transport // non-traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005057 // receptor signaling protein activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr13:36342788-36705464 (-) // 97.08 // q13.3"]
["11755502_x_at",0.18676662,0.039632797,-0.039632797,0.10077095,-0.12221813,-0.081082344,0.6790281,0.36909035,1.0691261,0.09643206,1.0691261,"up","TECR",9524,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0030497 // fatty acid elongation // inferred from direct assay /// 0035338 // long-chain fatty-acyl-CoA biosynthetic process // traceable author statement /// 0042761 // very long-chain fatty acid biosynthetic process // inferred from direct assay /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // inferred from direct assay","0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016627 // oxidoreductase activity, acting on the CH-CH group of donors // inferred from electronic annotation /// 0019166 // trans-2-enoyl-CoA reductase (NADPH) activity // inferred from electronic annotation","chr19:14640406-14676789 (+) // 88.67 // p13.12"]
["11739553_a_at",0.16627741,-0.06804514,0.46631622,-0.09619999,-0.07090187,0.06804514,0.56532675,0.24593659,1.1657041,0.22120166,1.1657041,"up","GAS7",8522,"0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0007050 // cell cycle arrest // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0030041 // actin filament polymerization // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0051017 // actin filament bundle assembly // inferred from electronic annotation","0001726 // ruffle // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005884 // actin filament // inferred from electronic annotation","0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0051015 // actin filament binding // inferred from electronic annotation","chr17:9813925-9940128 (-) // 90.07 // p13.1"]
["11722727_s_at",-0.020889282,0.21105194,-0.25819445,0.020889282,-0.08106518,0.09133053,0.93847126,0.8301406,-1.0231816,-0.033062164,1.0231816,"down","ZNF286A /// ZNF286B","57335 /// 729288","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:15602890-15624101 (+) // 69.61 // p12 /// chr17:18561741-18585717 (-) // 65.53 // p11.2"]
["11762333_x_at",-0.5529876,0.23608398,0.09529066,-0.34832525,0.051174164,-0.051174164,0.9591425,0.8836578,1.0297096,0.04223749,1.0297096,"up","NDUFA13",51079,"0006606 // protein import into nucleus // non-traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from mutant phenotype /// 0008624 // induction of apoptosis by extracellular signals // inferred from direct assay /// 0017148 // negative regulation of translation // inferred from direct assay /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0030262 // apoptotic nuclear change // inferred from direct assay /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0072593 // reactive oxygen species metabolic process // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005746 // mitochondrial respiratory chain // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from direct assay /// 0070469 // respiratory chain // inferred from electronic annotation","0003954 // NADH dehydrogenase activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // non-traceable author statement /// 0008137 // NADH dehydrogenase (ubiquinone) activity // inferred from direct assay","chr19:19627036-19639863 (+) // 96.97 // p13.11"]
["11736214_x_at",-0.18271732,0.085972786,0.13246822,-0.23149252,-0.027870655,0.027870655,0.7833678,0.51846206,1.0636858,0.08907203,1.0636858,"up","STAG3L1 /// STAG3L2 /// STAG3L3","442578 /// 442582 /// 54441","","0000795 // synaptonemal complex // inferred from electronic annotation /// 0000802 // transverse filament // inferred from electronic annotation /// 0001673 // male germ cell nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0030893 // meiotic cohesin complex // inferred from electronic annotation","","chr7:74988428-74997081 (+) // 64.97 // q11.23 /// chr7:72467821-72476466 (-) // 64.21 // q11.23"]
["11730164_a_at",0.29398775,0.18864155,0.1144166,-0.1144166,-0.22823334,-0.3386693,0.09707156,0.0068480396,1.3436167,0.42612165,1.3436167,"up","TRIM37",4591,"0016567 // protein ubiquitination // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051865 // protein autoubiquitination // inferred from direct assay /// 0070842 // aggresome assembly // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation /// 0016235 // aggresome // inferred from direct assay /// 0044445 // cytosolic part // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005164 // tumor necrosis factor receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:57060006-57184266 (-) // 98.42 // q22"]
["11716090_a_at",0.10834122,0.060952187,-0.331949,-0.1032505,-0.060952187,0.13479185,0.92240155,0.792097,-1.0312649,-0.044414964,1.0312649,"down","PRG2",5553,"0006955 // immune response // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0030133 // transport vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0008201 // heparin binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr11:57154254-57177586 (-) // 78.92 // q12.1"]
["11737396_a_at",-0.04001999,0.014620781,0.07918072,-0.19164276,0.093135834,-0.014620781,0.81290674,0.56942147,1.0393175,0.055636432,1.0393175,"up","TROVE2",6738,"0006383 // transcription from RNA polymerase III promoter // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // traceable author statement","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement","chr1:193028752-193054365 (+) // 99.8 // q31.2"]
["11733022_at",0.05619812,0.071460724,0.104114056,-0.08743048,-0.19765735,-0.05619812,0.13316332,0.013385077,1.1415702,0.1910196,1.1415702,"up","BTG1",694,"0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006479 // protein methylation // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0016477 // cell migration // non-traceable author statement /// 0030308 // negative regulation of cell growth // non-traceable author statement /// 0042981 // regulation of apoptotic process // inferred from mutant phenotype /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0045603 // positive regulation of endothelial cell differentiation // inferred from mutant phenotype /// 0045663 // positive regulation of myoblast differentiation // inferred from direct assay /// 0045663 // positive regulation of myoblast differentiation // non-traceable author statement /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from mutant phenotype /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from mutant phenotype","0003712 // transcription cofactor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0019900 // kinase binding // non-traceable author statement","chr12:92534055-92539673 (-) // 97.05 // q21.33"]
["11734070_x_at",-0.09675884,0.09675884,0.10024071,-0.18922806,0.17275143,-0.20805454,0.76001424,0.482444,1.0779253,0.108257234,1.0779253,"up","SSR3",6747,"0006412 // translation // traceable author statement /// 0006613 // cotranslational protein targeting to membrane // inferred from electronic annotation /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005784 // Sec61 translocon complex // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // inferred from electronic annotation","","chr3:156258544-156272935 (-) // 88.5 // q25.31"]
["11754519_x_at",0.0314126,-0.052686214,-0.08215952,0.290267,0.13140059,-0.031412125,0.4740185,0.17146045,-1.1208264,-0.16456279,1.1208264,"down","PRR4",11272,"0007601 // visual perception // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement","","chr12:10998447-11002074 (-) // 89.67 // p13.2"]
["11726398_a_at",-0.014726639,0.07394314,-0.035904884,0.014726639,-0.15514135,0.27088165,0.92339003,0.79452187,-1.0250672,-0.035718504,1.0250672,"down","SPTB",6710,"0007411 // axon guidance // traceable author statement /// 0051693 // actin filament capping // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0008091 // spectrin // inferred from electronic annotation /// 0008091 // spectrin // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0014731 // spectrin-associated cytoskeleton // inferred from direct assay /// 0015629 // actin cytoskeleton // traceable author statement /// 0031235 // intrinsic to internal side of plasma membrane // traceable author statement /// 0043234 // protein complex // inferred from direct assay","0003779 // actin binding // inferred from electronic annotation /// 0003779 // actin binding // traceable author statement /// 0005200 // structural constituent of cytoskeleton // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0030506 // ankyrin binding // inferred from physical interaction /// 0051015 // actin filament binding // inferred from direct assay","chr14:65212907-65346601 (-) // 99.28 // q23.3"]
["11722263_at",-0.0009279251,-0.053728104,-0.044282913,0.22949028,0.09495449,0.0009279251,0.37681141,0.10708584,-1.1030034,-0.14143722,1.1030034,"down","MRPS10",55173,"0006412 // translation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from electronic annotation","chr6:42174538-42185648 (-) // 84.53 // p21.1"]
["11730634_a_at",-0.14506745,-0.05230832,0.19133306,0.030569315,-0.030569315,0.15165782,0.8656993,0.66790026,-1.0371085,-0.05256689,1.0371085,"down","MAK",4117,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // non-traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045494 // photoreceptor cell maintenance // inferred from sequence or structural similarity /// 0045494 // photoreceptor cell maintenance // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from mutant phenotype","0001750 // photoreceptor outer segment // inferred from sequence or structural similarity /// 0001750 // photoreceptor outer segment // inferred from electronic annotation /// 0001917 // photoreceptor inner segment // inferred from direct assay /// 0001917 // photoreceptor inner segment // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0030496 // midbody // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0072686 // mitotic spindle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0004672 // protein kinase activity // non-traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004693 // cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr6:10762870-10838716 (-) // 91.68 // p24.2"]
["11733072_a_at",0.29955578,0.5078225,0.16241026,-0.35636616,-0.27731276,-0.16241026,0.09761259,0.0069198837,1.5038137,0.5886259,1.5038137,"up","PKN1",5585,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006972 // hyperosmotic response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // traceable author statement /// 0010631 // epithelial cell migration // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0035407 // histone H3-T11 phosphorylation // inferred from direct assay /// 2000145 // regulation of cell motility // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0030496 // midbody // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from direct assay /// 0032154 // cleavage furrow // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004697 // protein kinase C activity // inferred from electronic annotation /// 0005080 // protein kinase C binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017049 // GTP-Rho binding // inferred from direct assay /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from direct assay /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from mutant phenotype /// 0035402 // histone kinase activity (H3-T11 specific) // inferred from direct assay /// 0042393 // histone binding // inferred from direct assay /// 0042826 // histone deacetylase binding // inferred from direct assay /// 0048365 // Rac GTPase binding // inferred from direct assay /// 0050681 // androgen receptor binding // inferred from direct assay","chr19:14551958-14582671 (+) // 89.63 // p13.12"]
["11720004_at",0.3542471,0.013301849,-0.013301849,0.09782791,-0.14879131,-0.024055481,0.67043525,0.35866487,1.1042668,0.14308873,1.1042668,"up","C19orf21",126353,"","","","chr19:751124-764318 (+) // 97.82 // p13.3"]
["11734182_a_at",0.004471302,-0.0070738792,-0.004471779,-0.042606354,0.01429081,0.14573479,0.7709192,0.49895567,-1.0291818,-0.0414979,1.0291818,"down","CCDC9",26093,"","","","chr19:47759715-47775210 (+) // 90.57 // q13.32"]
["11756554_x_at",0.053765297,0.10613155,0.04394436,-0.059203148,-0.04394436,-0.05436611,0.073247,0.0037042415,1.0870751,0.12045163,1.0870751,"up","PSMC5",5705,"0000075 // cell cycle checkpoint // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006200 // ATP catabolic process // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0030163 // protein catabolic process // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043069 // negative regulation of programmed cell death // non-traceable author statement /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement","0000502 // proteasome complex // inferred from direct assay /// 0000502 // proteasome complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0031410 // cytoplasmic vesicle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003712 // transcription cofactor activity // traceable author statement /// 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // traceable author statement /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0031531 // thyrotropin-releasing hormone receptor binding // inferred from physical interaction","chr17:61904674-61909346 (+) // 88.92 // q23.3"]
["11743456_s_at",-0.09363365,-0.01477623,0.10041332,0.008616447,0.1489973,-0.008616447,0.78723264,0.5251883,-1.0369391,-0.052331228,1.0369391,"down","AP5M1",55745,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0016197 // endosomal transport // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030119 // AP-type membrane coat adaptor complex // inferred from direct assay /// 0030131 // clathrin adaptor complex // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","","chr14:57735205-57757011 (+) // 94.85 // q22.3"]
["11748134_x_at",-0.0045046806,-0.032231808,0.0045046806,-0.22335196,0.13866997,0.20140457,0.89443374,0.72753435,-1.0350149,-0.049651492,1.0350149,"down","SLC2A11",66035,"0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0022857 // transmembrane transporter activity // inferred from electronic annotation /// 0022891 // substrate-specific transmembrane transporter activity // inferred from electronic annotation","chr22:24199137-24226298 (+) // 93.75 // q11.23"]
["11743566_at",0.122514725,0.007528305,-0.007528305,0.0980587,-0.22567272,-0.18879604,0.5750688,0.2551864,1.1067338,0.14630826,1.1067338,"up","ACBD3",64746,"0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000062 // fatty-acyl-CoA binding // inferred from electronic annotation","chr1:226332381-226374419 (-) // 92.86 // q42.12"]
["11761208_x_at",0.03276205,-0.16616774,-0.17927217,-0.03276205,0.044703007,0.20312262,0.4392514,0.14581244,-1.1296797,-0.17591375,1.1296797,"down","PSMB7",5695,"0000075 // cell cycle checkpoint // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from electronic annotation","0000502 // proteasome complex // traceable author statement /// 0000502 // proteasome complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005839 // proteasome core complex // inferred from electronic annotation","0004175 // endopeptidase activity // inferred from electronic annotation /// 0004298 // threonine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr9:127118293-127177753 (-) // 99.72 // q33.3"]
["11763949_at",-0.10661793,0.02556181,0.12455845,-0.02556181,-0.02794075,0.10152626,0.99468,0.9857747,-1.0010452,-0.0015071563,1.0010452,"down","DAD1P1",56286,"","","","chr12:25070635-25071266 (+) // 100.0 // p12.1"]
["11760405_x_at",0.07126093,-0.21873426,-0.6422405,0.47409773,0.017237186,-0.017237186,0.48780814,0.18148619,-1.3391063,-0.42127052,1.3391063,"down","TRMT13",54482,"0008033 // tRNA processing // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation","","0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:100598718-100610123 (+) // 99.5 // p21.2"]
["11722221_at",0.042521954,0.059640884,-0.042521954,0.122160435,-0.08635616,-0.07391548,0.87427723,0.68462247,1.0228425,0.03258405,1.0228425,"up","BFSP2",8419,"0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0045104 // intermediate filament cytoskeleton organization // inferred from electronic annotation /// 0048469 // cell maturation // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0070307 // lens fiber cell development // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005882 // intermediate filament // inferred from electronic annotation /// 0005882 // intermediate filament // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005212 // structural constituent of eye lens // inferred from electronic annotation","chr3:133118789-133194039 (+) // 94.31 // q22.1"]
["11727678_a_at",0.21818352,0.0013279915,-0.25707054,-0.0013275146,-0.11860514,0.042768,0.97619915,0.9320956,1.0091928,0.013201853,1.0091928,"up","MTMR14",64419,"0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0001726 // ruffle // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0004438 // phosphatidylinositol-3-phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr3:9691143-9744077 (+) // 97.12 // p25.3"]
["11752356_a_at",0.15786028,0.13554525,0.022066593,-0.022066593,-0.3264184,-0.1724701,0.24539994,0.045814916,1.2131929,0.278809,1.2131929,"up","ABCC4",10257,"0002576 // platelet degranulation // traceable author statement /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031088 // platelet dense granule membrane // inferred from direct assay /// 0031088 // platelet dense granule membrane // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016404 // 15-hydroxyprostaglandin dehydrogenase (NAD+) activity // non-traceable author statement /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation","chr13:95822475-95953664 (-) // 97.48 // q32.1"]
["11729025_a_at",-0.15759182,0.12236023,-0.0033459663,-0.13412905,0.057832718,0.0033454895,0.969026,0.9135051,1.0079736,0.011457784,1.0079736,"up","ILDR1",286676,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr3:121706170-121741030 (-) // 78.95 // q13.33"]
["11724184_at",-0.40747643,0.074100256,0.026908398,-0.06615543,-0.026908398,0.19292688,0.75652915,0.47785625,-1.0984305,-0.13544361,1.0984305,"down","ATCAY",85300,"0006810 // transport // inferred from electronic annotation","","0005515 // protein binding // inferred from physical interaction /// 0019894 // kinesin binding // inferred from physical interaction","chr19:3880425-3928080 (+) // 79.28 // p13.3"]
["11755601_a_at",0.11487579,-0.31624317,-0.16248178,0.036434174,0.07369137,-0.036434174,0.64267856,0.32543638,-1.1063799,-0.1458468,1.1063799,"down","CCL13",6357,"0006874 // cellular calcium ion homeostasis // traceable author statement /// 0006935 // chemotaxis // traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0008360 // regulation of cell shape // inferred from direct assay /// 0048245 // eosinophil chemotaxis // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement","0005102 // receptor binding // traceable author statement /// 0005125 // cytokine activity // inferred from electronic annotation /// 0008009 // chemokine activity // inferred from direct assay /// 0008009 // chemokine activity // inferred from electronic annotation /// 0008009 // chemokine activity // traceable author statement","chr17:32684503-32685628 (+) // 97.94 // q12"]
["11761857_at",0.074353695,-0.026004791,-0.17043877,-0.26983023,0.026004791,0.11710024,0.9968309,0.9915233,1.0010716,0.0015451243,1.0010716,"up","ADAM33",80332,"0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // non-traceable author statement /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // non-traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:3657101-3662886 (-) // 66.93 // p13"]
["11731199_at",0.05686879,0.03783655,-0.03783655,-0.11809635,-0.19975615,0.058389902,0.58540547,0.26530796,1.0758253,0.105443865,1.0758253,"up","LHFPL3",375612,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr7:103969103-104549005 (+) // 95.8 // q22.2"]
["11763699_a_at",-0.05224943,-0.04126978,-0.0074882507,0.29439545,0.008419037,0.0074882507,0.5453219,0.22813138,-1.099695,-0.13710341,1.099695,"down","CLASP2",23122,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007020 // microtubule nucleation // inferred from mutant phenotype /// 0007026 // negative regulation of microtubule depolymerization // non-traceable author statement /// 0007026 // negative regulation of microtubule depolymerization // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007163 // establishment or maintenance of cell polarity // traceable author statement /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0016477 // cell migration // inferred from electronic annotation /// 0031023 // microtubule organizing center organization // inferred from mutant phenotype /// 0031110 // regulation of microtubule polymerization or depolymerization // inferred from mutant phenotype /// 0032886 // regulation of microtubule-based process // inferred from mutant phenotype /// 0034453 // microtubule anchoring // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005828 // kinetochore microtubule // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation /// 0005881 // cytoplasmic microtubule // inferred from direct assay /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005938 // cell cortex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from direct assay /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from electronic annotation /// 0008107 // galactoside 2-alpha-L-fucosyltransferase activity // non-traceable author statement /// 0051010 // microtubule plus-end binding // inferred from direct assay","chr3:33537736-33546943 (-) // 58.6 // p22.3"]
["11727424_s_at",-0.053001404,-0.14015007,-0.08862305,0.053002357,0.21753883,0.056806564,0.19026607,0.027442738,-1.151122,-0.2030407,1.151122,"down","CANX",821,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0006457 // protein folding // traceable author statement /// 0006457 // protein folding // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0009306 // protein secretion // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0048488 // synaptic vesicle endocytosis // inferred from sequence or structural similarity /// 0072583 // clathrin-mediated endocytosis // inferred from sequence or structural similarity","0005622 // intracellular // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // non-traceable author statement /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005791 // rough endoplasmic reticulum // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0032839 // dendrite cytoplasm // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0071556 // integral to lumenal side of endoplasmic reticulum membrane // traceable author statement","0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0005509 // calcium ion binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0034185 // apolipoprotein binding // inferred from electronic annotation /// 0035255 // ionotropic glutamate receptor binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // non-traceable author statement /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr5:179125927-179158637 (+) // 91.82 // q35.3"]
["11738167_x_at",-0.2118907,0.28432846,-0.07044792,-0.32140827,0.07044792,0.30775642,0.9798133,0.9418786,-1.0127435,-0.018268786,1.0127435,"down","CBX2",84733,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007548 // sex differentiation // inferred from electronic annotation /// 0016568 // chromatin modification // non-traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045137 // development of primary sexual characteristics // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // non-traceable author statement","0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0031519 // PcG protein complex // inferred from direct assay /// 0031519 // PcG protein complex // inferred from electronic annotation /// 0035102 // PRC1 complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0035064 // methylated histone residue binding // inferred from electronic annotation","chr17:77751992-77756331 (+) // 90.19 // q25.3"]
["11740265_a_at",0.010365963,-0.01036644,-0.05783558,-0.02542448,0.15095425,0.16165733,0.4403947,0.14639702,-1.0829809,-0.11500776,1.0829809,"down","C16orf7",9605,"0015986 // ATP synthesis coupled proton transport // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005215 // transporter activity // traceable author statement","chr16:89773540-89787394 (-) // 99.21 // q24.3"]
["11755701_a_at",-0.058594227,-0.1470604,-0.17201805,0.12831211,0.058594227,0.19636631,0.10785426,0.008504973,-1.1922183,-0.25364843,1.1922183,"down","AMPH",273,"0006897 // endocytosis // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007612 // learning // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0045807 // positive regulation of endocytosis // inferred from electronic annotation /// 0048488 // synaptic vesicle endocytosis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0008021 // synaptic vesicle // traceable author statement /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043679 // axon terminus // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr7:38424418-38502714 (-) // 98.92 // p14.1"]
["11746131_a_at",-0.08701563,0.08948898,-0.031782866,0.145782,-0.023432732,0.023432493,0.7487255,0.46615154,-1.0412841,-0.05836372,1.0412841,"down","ADAM18",8749,"0006508 // proteolysis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007283 // spermatogenesis // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation","chr8:39442007-39469094 (+) // 79.79 // p11.22"]
["11738681_at",-0.03121519,-0.106069565,-0.03500223,0.03121519,0.08307099,0.15156364,0.18686242,0.026406338,-1.1065323,-0.14604561,1.1065323,"down","OR13C5",138799,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr9:107360646-107361788 (-) // 100.0 // q31.1"]
["11753943_x_at",0.03438568,-0.059092045,-0.0057225227,0.10830212,-0.027009964,0.0057225227,0.75050384,0.4685046,-1.0275067,-0.039147813,1.0275067,"down","MICAL2",9645,"0008152 // metabolic process // inferred from electronic annotation /// 0030042 // actin filament depolymerization // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0003779 // actin binding // inferred from sequence or structural similarity /// 0003779 // actin binding // inferred from electronic annotation /// 0004497 // monooxygenase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016709 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0071949 // FAD binding // inferred from sequence or structural similarity","chr11:12137952-12285335 (+) // 96.81 // p15.3"]
["11716329_s_at",-0.06599665,0.08358908,0.06599665,-0.15959287,-0.07325244,0.13944197,0.8246856,0.58912396,1.0417416,0.05899748,1.0417416,"up","GJA1",2697,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0001764 // neuron migration // inferred from electronic annotation /// 0001947 // heart looping // inferred from electronic annotation /// 0002070 // epithelial cell maturation // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0007154 // cell communication // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype /// 0007267 // cell-cell signaling // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0007507 // heart development // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0007512 // adult heart development // inferred from electronic annotation /// 0008016 // regulation of heart contraction // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009268 // response to pH // inferred from electronic annotation /// 0010232 // vascular transport // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0015867 // ATP transport // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0016264 // gap junction assembly // traceable author statement /// 0034220 // ion transmembrane transport // traceable author statement /// 0035050 // embryonic heart tube development // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype /// 0043403 // skeletal muscle tissue regeneration // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0045732 // positive regulation of protein catabolic process // inferred from electronic annotation /// 0045844 // positive regulation of striated muscle tissue development // inferred from electronic annotation /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0051259 // protein oligomerization // inferred from electronic annotation /// 0051924 // regulation of calcium ion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0060174 // limb bud formation // inferred from electronic annotation","0000139 // Golgi membrane // traceable author statement /// 0000139 // Golgi membrane // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from electronic annotation /// 0005771 // multivesicular body // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005916 // fascia adherens // inferred from electronic annotation /// 0005921 // gap junction // inferred from sequence or structural similarity /// 0005921 // gap junction // inferred from electronic annotation /// 0005922 // connexon complex // inferred from electronic annotation /// 0005922 // connexon complex // traceable author statement /// 0014704 // intercalated disc // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030660 // Golgi-associated vesicle membrane // traceable author statement /// 0030660 // Golgi-associated vesicle membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from sequence or structural similarity /// 0045121 // membrane raft // inferred from electronic annotation","0004871 // signal transducer activity // inferred from mutant phenotype /// 0005102 // receptor binding // inferred from electronic annotation /// 0005243 // gap junction channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015075 // ion transmembrane transporter activity // traceable author statement /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0022857 // transmembrane transporter activity // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from electronic annotation","chr6:121756722-121770873 (+) // 95.05 // q22.31"]
["11758847_at",-0.18087196,0.091358185,0,-0.01559329,0.09372091,0,0.8054145,0.55550617,-1.0394933,-0.05588049,1.0394933,"down","MARCH9",92979,"0016567 // protein ubiquitination // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005795 // Golgi stack // inferred from direct assay /// 0005802 // trans-Golgi network // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:58148880-58154190 (+) // 92.24 // q14.1"]
["11756493_a_at",-0.02175045,-0.1462717,0.10400009,-0.22263479,0.02175045,0.31029463,0.9060337,0.7510873,-1.0408851,-0.05781081,1.0408851,"down","ADC",113451,"0006591 // ornithine metabolic process // inferred from electronic annotation /// 0006595 // polyamine metabolic process // traceable author statement /// 0006596 // polyamine biosynthetic process // inferred from electronic annotation /// 0007283 // spermatogenesis // non-traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0097055 // agmatine biosynthetic process // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0008792 // arginine decarboxylase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation","chr1:33546765-33586084 (+) // 92.35 // p35.1"]
["11734957_a_at",-0.0017652512,0.1487956,0.2143712,-0.16975164,0.0017652512,-0.13408804,0.27055323,0.055386864,1.1656693,0.22115858,1.1656693,"up","C14orf135",64430,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr14:60558544-60601530 (+) // 99.38 // q23.1"]
["11715212_x_at",-0.0056409836,0.08520889,0.035315514,-0.12651634,0.0056409836,-0.07127857,0.34972653,0.09235663,1.0735176,0.10234579,1.0735176,"up","SCAND1",51282,"0006355 // regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006917 // induction of apoptosis // non-traceable author statement /// 0016032 // viral reproduction // inferred from electronic annotation /// 0030851 // granulocyte differentiation // non-traceable author statement /// 0042127 // regulation of cell proliferation // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement","0003677 // DNA binding // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from sequence or structural similarity /// 0042802 // identical protein binding // inferred from physical interaction","chr20:34541545-34542428 (-) // 92.26 // q11.23"]
["11763282_x_at",0.017224073,-0.08013439,-0.017223835,0.064715385,0.05326414,-0.0587523,0.69767755,0.39343676,-1.0327233,-0.04645377,1.0327233,"down","RPL23AP7 /// RPL23AP82","118433 /// 284942","0006412 // translation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // inferred from electronic annotation","chr2:114367303-114384617 (-) // 33.97 // q13"]
["11760291_a_at",-0.14766121,0.0167799,-0.10831928,0.038253307,-0.0167799,0.12007666,0.39305854,0.11649386,-1.0919577,-0.12691696,1.0919577,"down","NAA10",8260,"0006323 // DNA packaging // traceable author statement /// 0006474 // N-terminal protein amino acid acetylation // inferred from direct assay /// 0006475 // internal protein amino acid acetylation // traceable author statement","0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0004596 // peptide alpha-N-acetyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008080 // N-acetyltransferase activity // inferred from electronic annotation /// 0008080 // N-acetyltransferase activity // traceable author statement /// 0016407 // acetyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0043022 // ribosome binding // inferred from direct assay","chrX:153195530-153200493 (-) // 98.33 // q28"]
["11742935_a_at",0.1449399,0.14975452,0.068660736,-0.20153427,-0.20494366,-0.068660736,0.08954294,0.005785084,1.2137724,0.27949792,1.2137724,"up","RTN4R",65078,"0007409 // axonogenesis // non-traceable author statement /// 0007409 // axonogenesis // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050770 // regulation of axonogenesis // traceable author statement /// 0050771 // negative regulation of axonogenesis // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation","0004872 // receptor activity // non-traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr22:20228937-20255838 (-) // 89.14 // q11.21"]
["11729877_at",-0.11441326,0.04484558,0.05847597,-0.008944988,-0.070568085,0.008944988,0.9094268,0.7595689,1.0138369,0.019825522,1.0138369,"up","ZNF445",353274,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:44480916-44519162 (-) // 63.14 // p21.31"]
["11719553_s_at",-0.11783028,-0.02469492,-0.0021238327,0.2658205,0.0021233559,0.25237465,0.3149215,0.075225405,-1.1660712,-0.22165585,1.1660712,"down","C2CD2L",9854,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:118978050-118987831 (+) // 95.98 // q23.3"]
["11748531_x_at",-0.10093641,-0.086719036,-0.028811455,0.12373304,0.028811455,0.06812334,0.13884889,0.014493468,-1.1062762,-0.14571156,1.1062762,"down","CACFD1",11094,"0048488 // synaptic vesicle endocytosis // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030285 // integral to synaptic vesicle membrane // inferred from electronic annotation","0005262 // calcium channel activity // inferred from electronic annotation","chr9:136325098-136334448 (+) // 96.41 // q34.2"]
["11734158_a_at",0.08160257,0.07158661,0.31034422,-0.07158661,-0.21559334,-0.12436724,0.19906867,0.030143438,1.2240764,0.2916936,1.2240764,"up","HACE1",57531,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006464 // cellular protein modification process // inferred from electronic annotation /// 0006944 // cellular membrane fusion // inferred from mutant phenotype /// 0007030 // Golgi organization // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0016601 // Rac protein signal transduction // traceable author statement /// 0030334 // regulation of cell migration // inferred from mutant phenotype /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay","0000139 // Golgi membrane // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // not recorded /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from direct assay /// 0048365 // Rac GTPase binding // inferred from physical interaction","chr6:105175967-105307793 (-) // 96.37 // q16.3"]
["11750037_a_at",0.32249212,0.2576089,0.33608675,-0.30366516,-0.38720226,-0.2576089,0.021198671,0.00015922071,1.5385323,0.6215547,1.5385323,"up","CHMP7",91782,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0016197 // endosomal transport // traceable author statement /// 0045324 // late endosome to vacuole transport // inferred from mutant phenotype","0000815 // ESCRT III complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0008565 // protein transporter activity // inferred from mutant phenotype","chr8:23104155-23116587 (+) // 98.85 // p21.3"]
["11755755_a_at",0.0208714,-0.0208714,0.18260455,-0.26718116,-0.17547464,0.10739684,0.5704639,0.2508533,1.1271044,0.17262116,1.1271044,"up","DDX26B",203522,"","","","chrX:134654593-134716434 (+) // 97.64 // q26.3"]
["11721132_at",0.19208527,0.008016586,-0.039096832,0.07953453,-0.008016586,-0.12391472,0.75979346,0.48213312,1.0505421,0.071134,1.0505421,"up","HCFC1",3054,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0016568 // chromatin modification // inferred from electronic annotation /// 0019046 // reactivation of latent virus // non-traceable author statement /// 0019046 // reactivation of latent virus // inferred from electronic annotation /// 0043254 // regulation of protein complex assembly // inferred from direct assay /// 0043981 // histone H4-K5 acetylation // inferred from direct assay /// 0043982 // histone H4-K8 acetylation // inferred from direct assay /// 0043984 // histone H4-K16 acetylation // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045787 // positive regulation of cell cycle // traceable author statement /// 0050821 // protein stabilization // inferred from direct assay","0000123 // histone acetyltransferase complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005671 // Ada2/Gcn5/Ada3 transcription activator complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0043025 // neuronal cell body // inferred from direct assay /// 0048188 // Set1C/COMPASS complex // inferred from direct assay /// 0070461 // SAGA-type complex // inferred from direct assay /// 0070688 // MLL5-L complex // inferred from direct assay /// 0071339 // MLL1 complex // inferred from direct assay","0003682 // chromatin binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0043995 // histone acetyltransferase activity (H4-K5 specific) // inferred from direct assay /// 0043996 // histone acetyltransferase activity (H4-K8 specific) // inferred from direct assay /// 0046972 // histone acetyltransferase activity (H4-K16 specific) // inferred from direct assay","chrX:153213007-153237269 (-) // 96.71 // q28"]
["11736857_at",-0.076173544,-0.03775692,0.03775692,-0.047590256,0.25747108,0.22343731,0.47441372,0.17174533,-1.1249263,-0.16983052,1.1249263,"down","ODF1",4956,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // non-traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0001520 // outer dense fiber // non-traceable author statement /// 0001520 // outer dense fiber // inferred from electronic annotation","0005198 // structural molecule activity // non-traceable author statement /// 0019904 // protein domain specific binding // inferred from electronic annotation","chr8:103563799-103573245 (+) // 92.99 // q22.3"]
["11754476_x_at",-0.05463791,-0.11543608,0.092057705,0.0017561913,-0.0017561913,0.032731056,0.82314944,0.58681333,-1.0259182,-0.036915768,1.0259182,"down","DNM1",1759,"0006184 // GTP catabolic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006897 // endocytosis // inferred from mutant phenotype /// 0006897 // endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // inferred from mutant phenotype /// 0007032 // endosome organization // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction","chr9:131015976-131017516 (+) // 92.36 // q34.11"]
["11724247_a_at",-0.059078693,0.010169983,-0.010733604,-0.010169983,0.01802969,0.18146276,0.5789812,0.25913507,-1.0592097,-0.08298825,1.0592097,"down","TMEM127",55654,"0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0032007 // negative regulation of TOR signaling cascade // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:96915945-96931751 (-) // 87.52 // q11.2"]
["11737149_a_at",0.23035908,0.05504656,-0.011599541,-0.008574009,0.008574486,-0.042126656,0.5430818,0.226117,1.075726,0.10531069,1.075726,"up","ETNK1",55500,"0006646 // phosphatidylethanolamine biosynthetic process // inferred from direct assay /// 0006646 // phosphatidylethanolamine biosynthetic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004305 // ethanolamine kinase activity // inferred from direct assay /// 0004305 // ethanolamine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation","chr12:22778075-22797521 (+) // 92.71 // p12.1"]
["11722912_at",0.2924404,0.18951225,0.15847397,-0.15847397,-0.32450294,-0.26806164,0.053542368,0.0018529895,1.3791904,0.46382168,1.3791904,"up","USP13",8975,"0006355 // regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0010506 // regulation of autophagy // inferred from direct assay /// 0030318 // melanocyte differentiation // traceable author statement /// 0050821 // protein stabilization // inferred from direct assay /// 0070536 // protein K63-linked deubiquitination // inferred from direct assay","","0004197 // cysteine-type endopeptidase activity // inferred from mutant phenotype /// 0004197 // cysteine-type endopeptidase activity // traceable author statement /// 0004221 // ubiquitin thiolesterase activity // inferred from direct assay /// 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0004843 // ubiquitin-specific protease activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0008242 // omega peptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0043130 // ubiquitin binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:179370497-179507189 (+) // 83.41 // q26.33"]
["11725776_a_at",-0.004675865,-0.01929903,-0.011327267,0.004675865,0.042067528,0.10729885,0.37421834,0.10551904,-1.0447189,-0.063114755,1.0447189,"down","ATF7IP2 /// LOC100287628","100287628 /// 80063","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","","chr16:10479914-10577495 (+) // 84.92 // p13.2"]
["11718960_at",0.019187927,-0.017942429,0.11572552,-0.20793152,0.017942429,-0.1683979,0.3976017,0.11949382,1.1160895,0.15845267,1.1160895,"up","NUFIP2",57532,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0042788 // polysomal ribosome // inferred from direct assay","0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr17:27582857-27621166 (-) // 94.03 // q11.2"]
["11741098_a_at",-0.4010501,0.1182313,0.061489582,-0.33271623,-0.061489582,0.10450673,0.9711366,0.91804767,1.0159222,0.022789907,1.0159222,"up","A2ML1",144568,"0010466 // negative regulation of peptidase activity // inferred from direct assay /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation /// 0052548 // regulation of endopeptidase activity // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation","0004866 // endopeptidase inhibitor activity // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from direct assay /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr12:8975067-9029354 (+) // 92.32 // p13.31"]
["11739090_at",0.04468918,0.0746479,0.052677155,-0.049759865,-0.08368397,-0.04468918,0.049439743,0.0015344713,1.0842638,0.116715804,1.0842638,"up","LUC7L3",51747,"0006397 // mRNA processing // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from mutant phenotype /// 0006950 // response to stress // inferred from mutant phenotype /// 0008380 // RNA splicing // inferred from mutant phenotype /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction","chr17:48796975-48830072 (+) // 94.86 // q21.33"]
["11716016_at",-0.045742035,-0.06346321,-0.06702995,0.047991753,0.1240387,0.045742035,0.1038648,0.007790382,-1.0953075,-0.13133591,1.0953075,"down","MAL2",114569,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr8:120220605-120257913 (+) // 88.06 // q24.12"]
["11736612_x_at",-0.23888731,-0.41252756,-0.2000947,0.24899626,0.3203187,0.2000947,0.053819958,0.0018762621,-1.4542813,-0.5403064,1.4542813,"down","KIAA1432",57589,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr9:5656582-5776555 (+) // 99.51 // p24.1"]
["11718896_x_at",-0.3224182,-0.010905266,0.12138176,0.010905266,-0.11339855,0.055146217,0.88925505,0.71681726,-1.0387619,-0.05486494,1.0387619,"down","SPAG9",9043,"0000187 // activation of MAPK activity // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // inferred from electronic annotation /// 0007283 // spermatogenesis // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0042147 // retrograde transport, endosome to Golgi // inferred from direct assay /// 0042692 // muscle cell differentiation // traceable author statement /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0051149 // positive regulation of muscle cell differentiation // traceable author statement /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0090074 // negative regulation of protein homodimerization activity // inferred from electronic annotation","0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016021 // integral to membrane // traceable author statement /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0008432 // JUN kinase binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0019894 // kinesin binding // inferred from electronic annotation /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation /// 0048273 // mitogen-activated protein kinase p38 binding // inferred from electronic annotation","chr17:49039536-49198226 (-) // 90.48 // q21.33"]
["11751411_x_at",0.12519932,0.009706497,0.0655303,-0.25077677,-0.04981327,-0.009706497,0.37423936,0.105547614,1.1252489,0.17024416,1.1252489,"up","CCDC64",92558,"0006810 // transport // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0055107 // Golgi to secretory granule transport // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from sequence or structural similarity /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0017137 // Rab GTPase binding // inferred from sequence or structural similarity /// 0034452 // dynactin binding // inferred from sequence or structural similarity","chr12:120502440-120531451 (+) // 99.85 // q24.23"]
["11749724_a_at",0.19690943,0.01777649,-0.017776966,0.31312227,-0.100646496,-0.26246452,0.8708425,0.6775147,1.058704,0.082299314,1.058704,"up","MEGF9",1955,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // non-traceable author statement","chr9:123367258-123476765 (-) // 97.48 // q33.2"]
["11757253_x_at",-0.020065308,-0.012650967,0.16335535,-0.2892456,0.11874199,0.012650967,0.78341824,0.5188843,1.0689274,0.09616388,1.0689274,"up","CDRT15P1",94158,"","","","chr17:13927814-13928915 (+) // 100.0 // p12 /// chr17:14139065-14140166 (-) // 98.73 // p12"]
["11756065_x_at",0.029213428,-0.095834255,-0.03527546,0.007314682,-0.007314682,0.2332716,0.5828893,0.26295218,-1.0805176,-0.11172263,1.0805176,"down","APOD",347,"0000302 // response to reactive oxygen species // inferred from direct assay /// 0000302 // response to reactive oxygen species // inferred from electronic annotation /// 0001525 // angiogenesis // non-traceable author statement /// 0006006 // glucose metabolic process // inferred from direct assay /// 0006629 // lipid metabolic process // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // non-traceable author statement /// 0007420 // brain development // inferred from sequence or structural similarity /// 0007568 // aging // non-traceable author statement /// 0010642 // negative regulation of platelet-derived growth factor receptor signaling pathway // inferred from direct assay /// 0014012 // peripheral nervous system axon regeneration // inferred from sequence or structural similarity /// 0042246 // tissue regeneration // inferred from sequence or structural similarity /// 0042308 // negative regulation of protein import into nucleus // inferred from direct assay /// 0042493 // response to drug // inferred from sequence or structural similarity /// 0048662 // negative regulation of smooth muscle cell proliferation // inferred from direct assay /// 0048678 // response to axon injury // inferred from sequence or structural similarity /// 0051895 // negative regulation of focal adhesion assembly // inferred from mutant phenotype /// 0060588 // negative regulation of lipoprotein lipid oxidation // inferred from direct assay /// 0060588 // negative regulation of lipoprotein lipid oxidation // inferred from electronic annotation /// 0071638 // negative regulation of monocyte chemotactic protein-1 production // inferred from direct assay /// 1900016 // negative regulation of cytokine production involved in inflammatory response // inferred from direct assay /// 2000098 // negative regulation of smooth muscle cell-matrix adhesion // inferred from mutant phenotype /// 2000405 // negative regulation of T cell migration // inferred from direct assay","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0022626 // cytosolic ribosome // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0043025 // neuronal cell body // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005215 // transporter activity // inferred from electronic annotation /// 0005319 // lipid transporter activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0015485 // cholesterol binding // inferred from direct assay /// 0036094 // small molecule binding // inferred from electronic annotation","chr3:195295752-195298208 (-) // 100.0 // q29"]
["11726964_at",-0.25069928,0.16274452,0.07842207,-0.07927346,-0.07842183,0.15611935,0.995064,0.9866031,-1.0018401,-0.0026522847,1.0018401,"down","SYNGAP1",8831,"0007165 // signal transduction // inferred from electronic annotation /// 0032320 // positive regulation of Ras GTPase activity // not recorded /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0046580 // negative regulation of Ras protein signal transduction // not recorded /// 0046580 // negative regulation of Ras protein signal transduction // inferred from sequence or structural similarity /// 0048167 // regulation of synaptic plasticity // inferred from sequence or structural similarity /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded /// 0031235 // intrinsic to internal side of plasma membrane // not recorded","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005099 // Ras GTPase activator activity // not recorded /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation","chr6:33387846-33421466 (+) // 95.01 // p21.32"]
["11743384_at",-0.13372374,0.007338524,-0.007338524,-0.076931,0.32817793,0.24682426,0.49171716,0.18473116,-1.157168,-0.21059836,1.157168,"down","PRPF40A",55660,"0006397 // mRNA processing // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from mutant phenotype /// 0008380 // RNA splicing // inferred from electronic annotation /// 0016477 // cell migration // inferred from mutant phenotype /// 0032465 // regulation of cytokinesis // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016363 // nuclear matrix // inferred from direct assay /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr2:153508103-153574511 (-) // 95.18 // q23.3"]
["11758718_x_at",-0.12942934,0.11989021,-0.03650856,0.030397415,-0.02174759,0.02174759,0.9052109,0.7495823,-1.0178195,-0.02548177,1.0178195,"down","ATP5E /// ATP5EP2 /// SLMO2-ATP5E","100533975 /// 432369 /// 514","0006200 // ATP catabolic process // inferred from direct assay /// 0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015986 // ATP synthesis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0042776 // mitochondrial ATP synthesis coupled proton transport // inferred by curator /// 0042776 // mitochondrial ATP synthesis coupled proton transport // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0000275 // mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) // inferred from electronic annotation /// 0005739 // mitochondrion // inferred by curator /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from direct assay /// 0005753 // mitochondrial proton-transporting ATP synthase complex // traceable author statement /// 0005759 // mitochondrial matrix // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0045261 // proton-transporting ATP synthase complex, catalytic core F(1) // inferred from electronic annotation","0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0022857 // transmembrane transporter activity // inferred by curator /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism // inferred from electronic annotation /// 0046961 // proton-transporting ATPase activity, rotational mechanism // inferred from electronic annotation","chr20:57603739-57607410 (-) // 55.19 // q13.32"]
["11718063_a_at",0.044063568,-0.017406464,-0.06951809,0.17285538,0.017406464,-0.032865524,0.69856095,0.39478776,-1.0473564,-0.066752404,1.0473564,"down","C11orf48",79081,"","","","chr11:62430288-62439246 (-) // 97.28 // q12.3"]
["11751336_x_at",-0.041693687,-0.05810356,-0.03037548,0.2047615,0.06109619,0.03037548,0.2789986,0.059081394,-1.1035372,-0.14213526,1.1035372,"down","MKRN1",23608,"0016567 // protein ubiquitination // inferred from electronic annotation","","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:140153942-140179168 (-) // 91.08 // q34"]
["11724535_a_at",-0.008075714,-0.19400692,-0.15252686,0.1890049,0.20165157,0.008075714,0.23100074,0.040602256,-1.1901257,-0.25111395,1.1901257,"down","UBA5",79876,"0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0071569 // protein ufmylation // inferred from direct assay /// 0071569 // protein ufmylation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016235 // aggresome // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048037 // cofactor binding // inferred from electronic annotation /// 0071566 // UFM1 activating enzyme activity // inferred from direct assay","chr3:132378309-132398963 (+) // 87.73 // q22.1"]
["11741614_x_at",0.0033221245,-0.0033216476,-0.04629898,-0.06045246,0.0058398247,0.004518509,0.9880981,0.9646678,1.0008774,0.0012652373,1.0008774,"up","KLC2",64837,"0007018 // microtubule-based movement // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008088 // axon cargo transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005871 // kinesin complex // inferred from sequence or structural similarity /// 0005871 // kinesin complex // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0016938 // kinesin I complex // non-traceable author statement /// 0035253 // ciliary rootlet // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0003777 // microtubule motor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019894 // kinesin binding // inferred from sequence or structural similarity","chr11:66025173-66035332 (+) // 93.41 // q13.2"]
["11758709_s_at",0.016172409,0.12893009,0.1891985,-0.0729332,-0.016172409,-0.01743412,0.2646268,0.053060938,1.1072239,0.14694695,1.1072239,"up","RDH11",51109,"0001523 // retinoid metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008202 // steroid metabolic process // traceable author statement /// 0042572 // retinol metabolic process // inferred from sequence or structural similarity /// 0042574 // retinal metabolic process // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005622 // intracellular // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004745 // retinol dehydrogenase activity // inferred from sequence or structural similarity /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0052650 // NADP-retinol dehydrogenase activity // inferred from direct assay /// 0052650 // NADP-retinol dehydrogenase activity // inferred from electronic annotation","chr14:68143580-68143905 (-) // 93.66 // q24.1"]
["11747358_x_at",0.24818611,0.03768444,-0.03768444,0.07682419,-0.11249447,-0.068912506,0.6347731,0.31700543,1.0849208,0.11758968,1.0849208,"up","CIAPIN1",57019,"0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from sequence or structural similarity /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation","0008168 // methyltransferase activity // inferred from electronic annotation","chr16:57462099-57481310 (-) // 98.12 // q21"]
["11750516_a_at",0.12559128,0.032060623,-0.009010315,0.009010315,-0.15413475,-0.12850475,0.3534511,0.094275095,1.1024834,0.14075692,1.1024834,"up","ATPAF1",64756,"0006461 // protein complex assembly // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:47101379-47131527 (-) // 90.68 // p33"]
["11738356_s_at",-0.14329791,0.06881666,-0.06881666,0.117302895,0.092586756,-0.15693188,0.816537,0.57528985,-1.0463885,-0.0654186,1.0463885,"down","OR4N2 /// OR4N3P","390429 /// 390539","0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr14:20295847-20296539 (+) // 95.27 // q11.2 /// chr15:22413701-22414393 (+) // 99.0 // q11.2"]
["11742813_at",-0.056298256,-0.009977341,0.009976864,0.021715641,0.015873909,-0.07831621,0.96347964,0.8976677,-1.0036044,-0.0051907185,1.0036044,"down","SEMA6A",57556,"0001764 // neuron migration // inferred from electronic annotation /// 0006915 // apoptotic process // non-traceable author statement /// 0007010 // cytoskeleton organization // non-traceable author statement /// 0007166 // cell surface receptor signaling pathway // non-traceable author statement /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // non-traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // non-traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0009887 // organ morphogenesis // non-traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0051642 // centrosome localization // inferred from electronic annotation /// 0071526 // semaphorin-plexin signaling pathway // inferred from electronic annotation /// 2001224 // positive regulation of neuron migration // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // non-traceable author statement","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030215 // semaphorin receptor binding // inferred from electronic annotation","chr5:115779250-115910709 (-) // 96.44 // q23.1"]
["11750829_at",-0.07471323,-0.15150023,-0.016647816,0.31214762,0.08254099,0.016647816,0.3440724,0.08942493,-1.1631732,-0.21806593,1.1631732,"down","LOC100653254",100653254,"","0005576 // extracellular region // inferred from electronic annotation","","chr19:3503617-4043154 (-) // 52.49 // p13.3"]
["11754848_a_at",0.27637768,-0.18807268,-0.1142416,0.03401184,0.0003643036,-0.0003643036,0.96303266,0.8967239,-1.0139474,-0.019982766,1.0139474,"down","ZNF169",169841,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:97061082-97065950 (+) // 54.82 // q22.32"]
["11757042_a_at",0.08525419,-0.023236275,0.023236275,-0.07677221,-0.14678764,0.16159534,0.8542577,0.6444498,1.0345999,0.04907296,1.0345999,"up","PDYN",5173,"0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0001515 // opioid peptide activity // inferred from electronic annotation","chr20:1960788-1974802 (-) // 99.51 // p13"]
["11718095_s_at",0.022922039,0.089818954,0.10501003,-0.14293528,-0.022922039,-0.19066668,0.18763497,0.026684867,1.141891,0.19142495,1.141891,"up","RNF38",152006,"","","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:36336396-36400920 (-) // 98.09 // p13.2"]
["11757498_s_at",0.11767483,-0.002421379,0.016280174,0.002421379,-0.062506676,-0.11767483,0.38690495,0.11307185,1.0740774,0.103097916,1.0740774,"up","TMEM106C",79022,"","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:48362248-48362661 (+) // 92.47 // q13.11"]
["11724734_at",0.13612986,0.039041996,-0.05661106,-0.08677006,-0.039041996,0.36526823,0.92808086,0.8062532,-1.0283265,-0.040298417,1.0283265,"down","ABCB8",11194,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0055085 // transmembrane transport // not recorded /// 0055085 // transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005740 // mitochondrial envelope // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // not recorded /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043190 // ATP-binding cassette (ABC) transporter complex // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0005215 // transporter activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // traceable author statement /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // not recorded /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation","chr7:150725511-150744869 (+) // 91.53 // q36.1"]
["11744480_s_at",-0.19993877,-0.09518623,-0.07050419,0.13836765,0.18090153,0.07050419,0.10435279,0.007867391,-1.1906925,-0.25180092,1.1906925,"down","RAB18",22931,"0001654 // eye development // inferred from sequence or structural similarity /// 0006184 // GTP catabolic process // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006897 // endocytosis // non-traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // non-traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007420 // brain development // inferred from sequence or structural similarity /// 0015031 // protein transport // inferred from electronic annotation","0005622 // intracellular // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // non-traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation","chr10:27817393-27829153 (+) // 87.22 // p12.1"]
["11761688_at",0.06836963,-0.19389868,0.01582241,-0.022145748,0.05565691,-0.01582241,0.8513609,0.63941264,-1.0298721,-0.042465124,1.0298721,"down","","","","","","chr6:21081886-21083374 (+) // 32.57 // p22.3"]
["11724553_at",-0.119057655,-0.07763672,0.077637196,0.10642052,0.12030363,-0.08747196,0.6969179,0.39241248,-1.0614991,-0.08610317,1.0614991,"down","PCGF5",84333,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0031519 // PcG protein complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:92979933-93044086 (+) // 92.97 // q23.32"]
["11722188_at",-0.01330471,0.011694908,0.10087204,0.548089,-0.011694908,-0.11888027,0.85145164,0.639498,-1.0763026,-0.10608381,1.0763026,"down","MTDH",92140,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0010508 // positive regulation of autophagy // inferred from direct assay /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from direct assay /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from direct assay /// 0070830 // tight junction assembly // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from sequence or structural similarity /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from sequence or structural similarity /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0016604 // nuclear body // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0046581 // intercellular canaliculus // inferred from sequence or structural similarity /// 0046581 // intercellular canaliculus // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0001085 // RNA polymerase II transcription factor binding // inferred from physical interaction /// 0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0051059 // NF-kappaB binding // inferred from physical interaction","chr8:98656369-98742488 (+) // 77.52 // q22.1"]
["11733186_at",0.21389675,0.052336216,-0.021000385,0.021000385,-0.08149862,-0.40158796,0.48464307,0.17915948,1.1775374,0.23577292,1.1775374,"up","OSMR",9180,"0002675 // positive regulation of acute inflammatory response // inferred by curator /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0034097 // response to cytokine stimulus // inferred from direct assay /// 0038165 // oncostatin-M-mediated signaling pathway // inferred from direct assay /// 0038165 // oncostatin-M-mediated signaling pathway // inferred from electronic annotation","0005900 // oncostatin-M receptor complex // inferred from direct assay /// 0005900 // oncostatin-M receptor complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004896 // cytokine receptor activity // inferred from electronic annotation /// 0004924 // oncostatin-M receptor activity // inferred from direct assay /// 0004924 // oncostatin-M receptor activity // inferred from electronic annotation /// 0004924 // oncostatin-M receptor activity // traceable author statement /// 0019838 // growth factor binding // inferred from physical interaction","chr5:38846100-38934888 (+) // 92.57 // p13.1"]
["11761793_a_at",0.3014679,0.061929703,-0.18871784,-0.103905916,0.10031772,-0.061929703,0.847404,0.6318822,1.0570663,0.08006589,1.0570663,"up","FAM122C",159091,"","","","chrX:133941299-133955985 (+) // 83.02 // q26.3"]
["11726094_at",-0.10491943,0.1581192,-0.056194305,0.056194305,-0.21504164,0.19909334,0.9740812,0.92604095,-1.0100408,-0.014413513,1.0100408,"down","KANK3",256949,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006364 // rRNA processing // inferred from mutant phenotype /// 0006412 // translation // inferred by curator /// 0006412 // translation // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0042274 // ribosomal small subunit biogenesis // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from electronic annotation","chr19:8387468-8408146 (-) // 93.81 // p13.2"]
["11759115_x_at",-0.20510054,-0.057369232,-0.013413906,0.08985376,0.03739977,0.013413906,0.3440724,0.08942964,-1.1010274,-0.13885033,1.1010274,"down","GMCL1",64395,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from electronic annotation","","chr2:70056737-70107507 (+) // 98.76 // p13.3"]
["11747046_x_at",-0.06425476,-0.029026031,-0.1343708,0.18120003,0.08064461,0.029026031,0.21040864,0.03354697,-1.127276,-0.17284071,1.127276,"down","CAPZA2",830,"0006461 // protein complex assembly // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0051693 // actin filament capping // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0008290 // F-actin capping protein complex // inferred from electronic annotation /// 0008290 // F-actin capping protein complex // traceable author statement /// 0015629 // actin cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030863 // cortical cytoskeleton // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation","chr7:116502612-116558717 (+) // 98.38 // q31.2"]
["11737929_a_at",-0.30006456,0.099211216,0.1994462,-0.06882954,0.068829775,-0.08425021,0.9542612,0.8714653,1.0193251,0.027614305,1.0193251,"up","FSHB",2488,"0001541 // ovarian follicle development // non-traceable author statement /// 0006701 // progesterone biosynthetic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from expression pattern /// 0007283 // spermatogenesis // non-traceable author statement /// 0007292 // female gamete generation // traceable author statement /// 0007565 // female pregnancy // traceable author statement /// 0016486 // peptide hormone processing // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0060011 // Sertoli cell proliferation // inferred from electronic annotation","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005625 // soluble fraction // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay","0005179 // hormone activity // traceable author statement /// 0005179 // hormone activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016913 // follicle-stimulating hormone activity // non-traceable author statement /// 0046982 // protein heterodimerization activity // non-traceable author statement","chr11:30252562-30256824 (+) // 94.73 // p14.1"]
["11744268_a_at",0.19312668,0.07304096,-0.060931206,0.060931206,-0.33158016,-0.17362976,0.49286264,0.1855677,1.1619154,0.21650505,1.1619154,"up","GIPC1",10755,"0006605 // protein targeting // inferred from sequence or structural similarity /// 0006605 // protein targeting // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // non-traceable author statement /// 0007268 // synaptic transmission // inferred from sequence or structural similarity /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0014047 // glutamate secretion // inferred from sequence or structural similarity /// 0014047 // glutamate secretion // inferred from electronic annotation /// 0030511 // positive regulation of transforming growth factor beta receptor signaling pathway // inferred from sequence or structural similarity /// 0030511 // positive regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0031647 // regulation of protein stability // inferred from sequence or structural similarity /// 0031647 // regulation of protein stability // inferred from electronic annotation /// 0032435 // negative regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0032435 // negative regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0043542 // endothelial cell migration // inferred from sequence or structural similarity /// 0043542 // endothelial cell migration // inferred from electronic annotation /// 0048167 // regulation of synaptic plasticity // inferred from sequence or structural similarity /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation /// 0005903 // brush border // inferred from electronic annotation /// 0005938 // cell cortex // inferred from direct assay /// 0008021 // synaptic vesicle // inferred from sequence or structural similarity /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0012506 // vesicle membrane // inferred from sequence or structural similarity /// 0012506 // vesicle membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from sequence or structural similarity /// 0043197 // dendritic spine // inferred from electronic annotation /// 0043198 // dendritic shaft // inferred from sequence or structural similarity /// 0043198 // dendritic shaft // inferred from electronic annotation /// 0044445 // cytosolic part // inferred from electronic annotation","0003779 // actin binding // inferred from sequence or structural similarity /// 0003779 // actin binding // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0017022 // myosin binding // inferred from sequence or structural similarity /// 0017022 // myosin binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr19:14588573-14593820 (-) // 80.61 // p13.12"]
["11721394_a_at",-0.06705284,0.10526276,0.041427612,-0.07382774,0.019257545,-0.019257545,0.7173147,0.42086238,1.0360942,0.05115516,1.0360942,"up","DTNBP1",84062,"0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006996 // organelle organization // inferred from electronic annotation /// 0007596 // blood coagulation // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0031175 // neuron projection development // inferred from direct assay /// 0031532 // actin cytoskeleton reorganization // inferred from sequence or structural similarity /// 0031532 // actin cytoskeleton reorganization // inferred from electronic annotation /// 0032438 // melanosome organization // non-traceable author statement /// 0048812 // neuron projection morphogenesis // inferred from sequence or structural similarity /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0060155 // platelet dense granule organization // inferred from electronic annotation /// 0060159 // regulation of dopamine receptor signaling pathway // inferred from sequence or structural similarity","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from sequence or structural similarity /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from direct assay /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016528 // sarcoplasm // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030424 // axon // inferred from sequence or structural similarity /// 0030424 // axon // inferred from electronic annotation /// 0030426 // growth cone // inferred from sequence or structural similarity /// 0030426 // growth cone // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from direct assay /// 0030672 // synaptic vesicle membrane // inferred from sequence or structural similarity /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031083 // BLOC-1 complex // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0033162 // melanosome membrane // inferred from electronic annotation /// 0033267 // axon part // inferred from sequence or structural similarity /// 0033267 // axon part // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from sequence or structural similarity /// 0042383 // sarcolemma // inferred from electronic annotation /// 0043005 // neuron projection // inferred from direct assay /// 0043197 // dendritic spine // inferred from sequence or structural similarity /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr6:15523037-15663271 (-) // 88.11 // p22.3"]
["11733182_a_at",-0.23359466,0.03721142,0.14688993,-0.06755614,0.26523423,-0.03721142,0.86978,0.6752944,-1.0497069,-0.069986604,1.0497069,"down","ETV1",2115,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0048935 // peripheral nervous system neuron development // traceable author statement","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr7:13930852-14029291 (-) // 92.33 // p21.2"]
["11754511_a_at",0.10427284,0.091516495,-0.17531538,0.09106541,-0.09106588,-0.12690496,0.87547874,0.687214,1.0346383,0.049126484,1.0346383,"up","AXIN1",8312,"0000209 // protein polyubiquitination // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001743 // optic placode formation // not recorded /// 0001932 // regulation of protein phosphorylation // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from direct assay /// 0007165 // signal transduction // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // not recorded /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // not recorded /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0008219 // cell death // not recorded /// 0009950 // dorsal/ventral axis specification // not recorded /// 0009950 // dorsal/ventral axis specification // inferred from electronic annotation /// 0009953 // dorsal/ventral pattern formation // inferred from electronic annotation /// 0010800 // positive regulation of peptidyl-threonine phosphorylation // inferred from direct assay /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0021797 // forebrain anterior/posterior pattern specification // not recorded /// 0021881 // Wnt receptor signaling pathway involved in forebrain neuron fate commitment // not recorded /// 0030163 // protein catabolic process // inferred from electronic annotation /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from direct assay /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0030511 // positive regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0030910 // olfactory placode formation // not recorded /// 0031122 // cytoplasmic microtubule organization // not recorded /// 0031122 // cytoplasmic microtubule organization // inferred from electronic annotation /// 0031398 // positive regulation of protein ubiquitination // inferred from direct assay /// 0031398 // positive regulation of protein ubiquitination // inferred from electronic annotation /// 0032147 // activation of protein kinase activity // inferred from direct assay /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0034244 // negative regulation of transcription elongation from RNA polymerase II promoter // inferred from electronic annotation /// 0035121 // tail morphogenesis // not recorded /// 0035121 // tail morphogenesis // inferred from electronic annotation /// 0035412 // regulation of catenin import into nucleus // not recorded /// 0035412 // regulation of catenin import into nucleus // inferred from electronic annotation /// 0038032 // termination of G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0043507 // positive regulation of JUN kinase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // not recorded /// 0043623 // cellular protein complex assembly // inferred from direct assay /// 0045599 // negative regulation of fat cell differentiation // not recorded /// 0045599 // negative regulation of fat cell differentiation // inferred from electronic annotation /// 0045732 // positive regulation of protein catabolic process // inferred by curator /// 0045732 // positive regulation of protein catabolic process // inferred from direct assay /// 0045860 // positive regulation of protein kinase activity // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0046330 // positive regulation of JNK cascade // inferred from sequence or structural similarity /// 0046330 // positive regulation of JNK cascade // inferred from electronic annotation /// 0048048 // embryonic eye morphogenesis // not recorded /// 0048318 // axial mesoderm development // inferred from electronic annotation /// 0048320 // axial mesoderm formation // not recorded /// 0048320 // axial mesoderm formation // inferred from electronic annotation /// 0051248 // negative regulation of protein metabolic process // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0051443 // positive regulation of ubiquitin-protein ligase activity // inferred from mutant phenotype /// 0055001 // muscle cell development // not recorded /// 0060070 // canonical Wnt receptor signaling pathway // inferred by curator /// 0060070 // canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0060272 // embryonic skeletal joint morphogenesis // not recorded /// 0060823 // canonical Wnt receptor signaling pathway involved in neural plate anterior/posterior pattern formation // not recorded /// 0071407 // cellular response to organic cyclic compound // not recorded /// 0071514 // genetic imprinting // inferred from electronic annotation /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // not recorded /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0090244 // Wnt receptor signaling pathway involved in somitogenesis // not recorded /// 2000060 // positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 2000060 // positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005881 // cytoplasmic microtubule // not recorded /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005938 // cell cortex // not recorded /// 0005938 // cell cortex // inferred from electronic annotation /// 0014069 // postsynaptic density // not recorded /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // not recorded /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0016328 // lateral plasma membrane // inferred from direct assay /// 0030877 // beta-catenin destruction complex // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from sequence or structural similarity /// 0034742 // APC-Axin-1-beta-catenin complex // inferred from direct assay /// 0034747 // Axin-APC-beta-catenin-GSK3B complex // inferred from direct assay /// 0034747 // Axin-APC-beta-catenin-GSK3B complex // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0044444 // cytoplasmic part // inferred from electronic annotation /// 0044459 // plasma membrane part // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0071944 // cell periphery // inferred from direct assay","0002039 // p53 binding // inferred from direct assay /// 0004871 // signal transducer activity // inferred from direct assay /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from direct assay /// 0008013 // beta-catenin binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // not recorded /// 0019901 // protein kinase binding // inferred from direct assay /// 0019901 // protein kinase binding // inferred from sequence or structural similarity /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from electronic annotation /// 0032947 // protein complex scaffold // inferred from direct assay /// 0032947 // protein complex scaffold // inferred from mutant phenotype /// 0042802 // identical protein binding // inferred from sequence or structural similarity /// 0042802 // identical protein binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043621 // protein self-association // inferred from electronic annotation /// 0046332 // SMAD binding // inferred from physical interaction /// 0070016 // armadillo repeat domain binding // not recorded /// 0070016 // armadillo repeat domain binding // inferred from sequence or structural similarity /// 0070411 // I-SMAD binding // inferred from physical interaction /// 0070411 // I-SMAD binding // inferred from electronic annotation /// 0070412 // R-SMAD binding // inferred from electronic annotation","chr16:337440-397107 (-) // 99.43 // p13.3"]
["11726066_a_at",0.09267521,-0.025730133,-0.018445015,0.018445015,0.09531593,-0.04084778,0.9612395,0.8894701,-1.0056566,-0.008137754,1.0056566,"down","BUD13",84811,"0000398 // nuclear mRNA splicing, via spliceosome // inferred from sequence or structural similarity /// 0006406 // mRNA export from nucleus // inferred from sequence or structural similarity","0070274 // RES complex // inferred from sequence or structural similarity","","chr11:116618885-116643714 (-) // 96.88 // q23.3"]
["11720625_a_at",-0.11714172,-0.008256912,0.023895264,0.008256912,0.02060318,-0.013847351,0.7204559,0.42579493,-1.0272865,-0.038838632,1.0272865,"down","MAT2B",27430,"0000096 // sulfur amino acid metabolic process // traceable author statement /// 0006556 // S-adenosylmethionine biosynthetic process // inferred from direct assay /// 0006556 // S-adenosylmethionine biosynthetic process // inferred from electronic annotation /// 0006730 // one-carbon metabolic process // inferred from electronic annotation /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0032259 // methylation // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044237 // cellular metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045226 // extracellular polysaccharide biosynthetic process // inferred from electronic annotation","0005622 // intracellular // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0048269 // methionine adenosyltransferase complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008831 // dTDP-4-dehydrorhamnose reductase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0048270 // methionine adenosyltransferase regulator activity // inferred from direct assay /// 0050662 // coenzyme binding // inferred from electronic annotation","chr5:162930100-162946306 (+) // 97.02 // q34"]
["11750010_a_at",-0.0008649826,0.011202335,0.0008649826,0.12769413,-0.029335022,-0.10316658,0.979673,0.9413665,1.0037059,0.0053365426,1.0037059,"up","WHSC1",7468,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0003149 // membranous septum morphogenesis // inferred from electronic annotation /// 0003289 // atrial septum primum morphogenesis // inferred from electronic annotation /// 0003290 // atrial septum secundum morphogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0034968 // histone lysine methylation // inferred from electronic annotation /// 0060348 // bone development // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:1889227-1913879 (+) // 81.68 // p16.3"]
["11730119_at",0.28280687,-0.022726536,-0.04323435,0,0,0.107337475,0.9094268,0.75945616,1.0256246,0.036502816,1.0256246,"up","CLDND2",125875,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr19:51870353-51872257 (-) // 94.28 // q13.41"]
["11754799_s_at",-0.15555,-0.07557392,-0.041672707,0.1127615,0.16490269,0.041672707,0.14512418,0.015912391,-1.1466124,-0.19737779,1.1466124,"down","NMD3",51068,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","","chr3:160939097-160969796 (+) // 99.62 // q26.1"]
["11745936_a_at",0.15184689,0.04985428,0.005906105,-0.005906105,-0.1989212,-0.26057816,0.28978515,0.06344825,1.1682407,0.2243375,1.1682407,"up","SLC50A1",55974,"0006310 // DNA recombination // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0042946 // glucoside transport // inferred from direct assay /// 0045815 // positive regulation of gene expression, epigenetic // inferred from sequence or structural similarity /// 0045815 // positive regulation of gene expression, epigenetic // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred by curator /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0042947 // glucoside transmembrane transporter activity // inferred from direct assay","chr1:155108287-155111020 (+) // 93.11 // q22"]
["11731919_a_at",-0.45182467,-0.08768177,-0.123241425,0.08768177,0.40560913,0.1675973,0.23652998,0.04247425,-1.3577445,-0.44121197,1.3577445,"down","TMPO",7112,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005521 // lamin binding // traceable author statement","chr12:98909408-98942735 (+) // 94.1 // q23.1"]
["11745599_at",-0.21763992,-0.030351162,-0.030412197,0.1441164,0.09631348,0.030351162,0.2822434,0.060488485,-1.1352905,-0.18306151,1.1352905,"down","ANXA2P3",305,"0001501 // skeletal system development // traceable author statement /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001525 // angiogenesis // inferred from expression pattern /// 0007589 // body fluid secretion // inferred from electronic annotation /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0031340 // positive regulation of vesicle fusion // inferred from direct assay /// 0042730 // fibrinolysis // inferred from electronic annotation /// 0051099 // positive regulation of binding // inferred from electronic annotation /// 0071229 // cellular response to acid // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005625 // soluble fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005811 // lipid particle // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0019897 // extrinsic to plasma membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0035749 // myelin sheath adaxonal region // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043220 // Schmidt-Lanterman incisure // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0004859 // phospholipase inhibitor activity // inferred from electronic annotation /// 0004859 // phospholipase inhibitor activity // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005544 // calcium-dependent phospholipid binding // inferred from electronic annotation /// 0005544 // calcium-dependent phospholipid binding // inferred from direct assay /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from electronic annotation /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from electronic annotation","chr10:66585284-66586638 (+) // 96.78 // q21.3"]
["11730088_x_at",-0.012773037,0.06534338,-0.010194302,-0.0359931,0.010193825,0.21512985,0.81878114,0.57937264,-1.0345367,-0.04898485,1.0345367,"down","DLGAP3",58512,"0007267 // cell-cell signaling // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0001540 // beta-amyloid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation","chr1:35331037-35370984 (-) // 94.02 // p34.3"]
["11727413_at",-0.62187576,0.26484537,-0.12490082,-0.46151495,0.12490082,0.12928104,0.9217488,0.79095495,-1.0655016,-0.09153272,1.0655016,"down","CLN8",2055,"0001306 // age-dependent response to oxidative stress // inferred from electronic annotation /// 0006644 // phospholipid metabolic process // inferred from mutant phenotype /// 0006644 // phospholipid metabolic process // inferred from electronic annotation /// 0006672 // ceramide metabolic process // inferred from mutant phenotype /// 0006869 // lipid transport // non-traceable author statement /// 0007006 // mitochondrial membrane organization // inferred from electronic annotation /// 0007040 // lysosome organization // inferred from electronic annotation /// 0007399 // nervous system development // inferred from mutant phenotype /// 0007601 // visual perception // inferred from electronic annotation /// 0007628 // adult walking behavior // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from mutant phenotype /// 0008219 // cell death // inferred from electronic annotation /// 0008306 // associative learning // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0008361 // regulation of cell size // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // non-traceable author statement /// 0021522 // spinal cord motor neuron differentiation // inferred from electronic annotation /// 0021523 // somatic motor neuron differentiation // inferred from electronic annotation /// 0030163 // protein catabolic process // non-traceable author statement /// 0035176 // social behavior // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0044257 // cellular protein catabolic process // inferred from electronic annotation /// 0044265 // cellular macromolecule catabolic process // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // inferred from electronic annotation /// 0045494 // photoreceptor cell maintenance // inferred from electronic annotation /// 0045861 // negative regulation of proteolysis // non-traceable author statement /// 0046513 // ceramide biosynthetic process // non-traceable author statement /// 0050881 // musculoskeletal movement // inferred from electronic annotation /// 0050884 // neuromuscular process controlling posture // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation /// 0051348 // negative regulation of transferase activity // inferred from electronic annotation /// 0051935 // glutamate uptake involved in synaptic transmission // inferred from electronic annotation /// 0060041 // retina development in camera-type eye // inferred from electronic annotation /// 0060052 // neurofilament cytoskeleton organization // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation","","chr8:1711869-1734735 (+) // 76.41 // p23.3"]
["11727446_a_at",-0.2587719,-0.016756058,0.22897744,-0.12021923,0.016756058,0.025265217,0.98164976,0.9467718,1.0073389,0.010549106,1.0073389,"up","PTPN5",84867,"0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0001784 // phosphotyrosine binding // inferred from direct assay /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr11:18749478-18813389 (-) // 92.63 // p15.1"]
["11744704_s_at",0.0826149,0.05617428,0.01482296,-0.01482296,-0.0790596,-0.10627556,0.18015373,0.02451495,1.0851718,0.11792348,1.0851718,"up","GOLGA3",2802,"0006891 // intra-Golgi vesicle-mediated transport // non-traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0017119 // Golgi transport complex // inferred from direct assay /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0005215 // transporter activity // non-traceable author statement","chr12:133345499-133404998 (-) // 94.98 // q24.33"]
["11747128_a_at",-0.021575928,0.001414299,0.011971474,-0.001414299,-0.10998297,0.03145027,0.83771074,0.6145454,1.0167176,0.023918949,1.0167176,"up","PHTF2",57157,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation","chr7:77535577-77567521 (+) // 89.24 // q21.11"]
["11739305_a_at",0.37839317,0.3139,0.30292988,-0.30292988,-0.47769547,-0.42056656,0.023042105,0.00020572059,1.6610992,0.7321382,1.6610992,"up","WRB",7485,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr21:40752212-40769814 (+) // 99.43 // q22.2"]
["11722324_a_at",-0.00886631,0.026774406,-0.13348246,0.06860638,0.00886631,-0.18085623,0.98860437,0.96597296,-1.0028206,-0.004063553,1.0028206,"down","ZNF84",7637,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:133613877-133639885 (+) // 90.47 // q24.33"]
["11729373_a_at",-0.0666914,-0.16730165,-0.142097,0.07589531,0.0666914,0.18674564,0.10851631,0.008659729,-1.1770216,-0.23514082,1.1770216,"down","KCNIP2",30819,"0005513 // detection of calcium ion // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // traceable author statement /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006936 // muscle contraction // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007268 // synaptic transmission // non-traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0008016 // regulation of heart contraction // traceable author statement /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0045163 // clustering of voltage-gated potassium channels // inferred from direct assay /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008076 // voltage-gated potassium channel complex // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005250 // A-type (transient outward) potassium channel activity // traceable author statement /// 0005267 // potassium channel activity // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0046923 // ER retention sequence binding // non-traceable author statement /// 0047485 // protein N-terminus binding // inferred from physical interaction","chr10:103585728-103603677 (-) // 97.2 // q24.32"]
["11744487_x_at",0.035794258,-0.069662094,-0.12488365,0.10210037,0.044795036,-0.03579521,0.5350485,0.21932709,-1.0643337,-0.08995052,1.0643337,"down","CNBP",7555,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from sequence or structural similarity /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003727 // single-stranded RNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:128888419-128902753 (-) // 97.89 // q21.3"]
["11719106_a_at",0.15154552,0.08381939,0.048542976,-0.048542976,-0.14490509,-0.10404444,0.11181555,0.009240629,1.1437725,0.1938001,1.1437725,"up","ELMO2",63916,"0006909 // phagocytosis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0060326 // cell chemotaxis // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0010333 // terpene synthase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0030971 // receptor tyrosine kinase binding // inferred from physical interaction","chr20:44994688-45035690 (-) // 97.76 // q13.12"]
["11752963_a_at",0.04180622,0.10239172,-0.04180622,-0.072741985,-0.059343338,0.08999109,0.77875674,0.5110452,1.0339469,0.048162054,1.0339469,"up","SLC25A30",253512,"0006810 // transport // inferred from electronic annotation /// 0006839 // mitochondrial transport // inferred from electronic annotation","0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","","chr13:45969618-45992515 (-) // 99.78 // q14.13"]
["11726370_a_at",-0.012951374,0.4066329,-0.069182396,-0.083330154,0.17008209,0.012951374,0.8708425,0.6774153,1.0533113,0.07493194,1.0533113,"up","BACH1 /// GRIK1-AS2","100379661 /// 571","0000083 // regulation of transcription involved in G1/S phase of mitotic cell cycle // inferred from mutant phenotype /// 0000117 // regulation of transcription involved in G2/M-phase of mitotic cell cycle // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0061418 // regulation of transcription from RNA polymerase II promoter in response to hypoxia // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay","0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from mutant phenotype /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0020037 // heme binding // non-traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr21:30671736-30718598 (+) // 96.38 // q21.3"]
["11751367_a_at",0.13276577,0.071930885,0.01825428,-0.048673153,-0.061717033,-0.018254757,0.1982733,0.029884497,1.0846267,0.11719856,1.0846267,"up","EDEM1",9695,"0006457 // protein folding // traceable author statement /// 0006986 // response to unfolded protein // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0030433 // ER-associated protein catabolic process // inferred from sequence or structural similarity /// 0030433 // ER-associated protein catabolic process // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // inferred from sequence or structural similarity /// 0030176 // integral to endoplasmic reticulum membrane // inferred from electronic annotation","0004571 // mannosyl-oligosaccharide 1,2-alpha-mannosidase activity // inferred from direct assay /// 0004571 // mannosyl-oligosaccharide 1,2-alpha-mannosidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0051787 // misfolded protein binding // inferred from direct assay","chr3:5230033-5252983 (+) // 99.93 // p26.1"]
["11736321_a_at",0.2981801,0.17692852,0.1056056,-0.1056056,-0.39601755,-0.2624483,0.122859105,0.011353169,1.3643955,0.4482619,1.3643955,"up","ANKRD26",22852,"","0005813 // centrosome // inferred from direct assay","","chr10:27293283-27389427 (-) // 78.49 // p12.1"]
["11733947_at",0.5698321,-0.0686779,-0.036126375,0.0035321712,0.18455553,-0.0035321712,0.8759237,0.68819916,1.0669487,0.09349074,1.0669487,"up","EIF5AL1",143244,"0006412 // translation // inferred from electronic annotation /// 0006414 // translational elongation // inferred from electronic annotation /// 0006452 // translational frameshifting // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0008612 // peptidyl-lysine modification to hypusine // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0045901 // positive regulation of translational elongation // inferred from electronic annotation /// 0045905 // positive regulation of translational termination // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0043022 // ribosome binding // inferred from electronic annotation","chr10:81272288-81276196 (+) // 73.68 // q22.3"]
["11756132_a_at",0.29842377,0.03409767,-0.03409767,0.3191948,-0.04003811,-0.03875065,0.9671241,0.90775937,1.0134952,0.019339265,1.0134952,"up","DHX16",8449,"0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003724 // RNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr6:30620899-30629760 (-) // 94.01 // p21.33"]
["11740943_at",0.046166897,0.025569439,-0.092310905,-0.17955399,-0.025569439,0.085757256,0.8945718,0.7277915,1.0230882,0.03293055,1.0230882,"up","SHOX",6473,"0001501 // skeletal system development // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0000976 // transcription regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chrX:585074-612318 (+) // 88.76 // p22.33 /// chrY:535074-562318 (+) // 88.76 // p11.32"]
["11727120_a_at",0.056747437,-0.20802307,-0.0025014877,0.08799076,0.0025014877,-0.16318989,0.9324228,0.8163186,-1.0189099,-0.027026527,1.0189099,"down","MYCBP2",23077,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0021785 // branchiomotor neuron axon guidance // inferred from electronic annotation /// 0021952 // central nervous system projection neuron axonogenesis // inferred from electronic annotation /// 0032880 // regulation of protein localization // inferred from electronic annotation /// 0048667 // cell morphogenesis involved in neuron differentiation // inferred from electronic annotation /// 0051493 // regulation of cytoskeleton organization // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr13:77618791-77901177 (-) // 98.61 // q22.3"]
["11740187_at",0.10696268,-0.106564045,0.061079502,-0.07610226,-0.061079502,0.19557476,0.9974226,0.99295455,1.0007131,0.0010284336,1.0007131,"up","ARL11",115761,"0007264 // small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation","chr13:50202434-50208008 (+) // 70.11 // q14.2"]
["11725458_a_at",-0.10868931,-0.0145196915,0.12583447,-0.17552519,0.0145196915,0.1908617,0.98126954,0.9459586,-1.0063114,-0.009076836,1.0063114,"down","KLHDC8A",55220,"","","","chr1:205305192-205326124 (-) // 99.64 // q32.1"]
["11720351_a_at",0.5921588,0.16675329,0.18210077,-0.16675329,-0.2835002,-0.22643471,0.16134605,0.019739127,1.4532005,0.53923374,1.4532005,"up","ETV5",2119,"0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0034599 // cellular response to oxidative stress // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0060762 // regulation of branching involved in mammary gland duct morphogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay","chr3:185764102-185826901 (-) // 92.57 // q27.2"]
["11761123_at",-0.26076174,-0.102947235,-0.00043010712,0.16589713,0.27698278,0.00043034554,0.30637497,0.07136654,-1.2050974,-0.2691498,1.2050974,"down","RNGTT",8732,"0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006370 // 7-methylguanosine mRNA capping // inferred from electronic annotation /// 0006370 // 7-methylguanosine mRNA capping // traceable author statement /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004484 // mRNA guanylyltransferase activity // inferred from electronic annotation /// 0004484 // mRNA guanylyltransferase activity // traceable author statement /// 0004651 // polynucleotide 5'-phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr6:89387712-89673280 (-) // 86.22 // q15"]
["11736083_x_at",0.30598545,0.075909615,0.010149956,-0.010149956,-0.30764532,-0.24691105,0.29728207,0.06679894,1.247394,0.31891719,1.247394,"up","GTSE1",51512,"0000085 // G2 phase of mitotic cell cycle // non-traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // non-traceable author statement /// 0007017 // microtubule-based process // non-traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005881 // cytoplasmic microtubule // non-traceable author statement","","chr22:46692637-46729535 (+) // 78.03 // q13.31"]
["11723107_a_at",0.024252892,0.023875237,0.13914919,-0.19078588,-0.023875237,-0.043497086,0.33545065,0.08491429,1.1083999,0.14847845,1.1083999,"up","RBFA",79863,"0006364 // rRNA processing // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation","","chr18:77794357-77806472 (+) // 99.8 // q23"]
["11756323_x_at",-0.0749464,0.021941185,-0.021940708,-0.032863617,0.2897663,0.15763187,0.4727511,0.1703799,-1.1197371,-0.1631601,1.1197371,"down","F12",2161,"0002353 // plasma kallikrein-kinin cascade // inferred from direct assay /// 0002542 // Factor XII activation // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0007596 // blood coagulation // inferred from electronic annotation /// 0007597 // blood coagulation, intrinsic pathway // inferred by curator /// 0007597 // blood coagulation, intrinsic pathway // traceable author statement /// 0007599 // hemostasis // inferred from electronic annotation /// 0010756 // positive regulation of plasminogen activation // inferred from direct assay /// 0016485 // protein processing // inferred from direct assay /// 0016540 // protein autoprocessing // inferred from direct assay /// 0030193 // regulation of blood coagulation // inferred from electronic annotation /// 0030194 // positive regulation of blood coagulation // inferred from direct assay /// 0031638 // zymogen activation // inferred from direct assay /// 0042730 // fibrinolysis // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0051788 // response to misfolded protein // inferred from direct assay /// 0051919 // positive regulation of fibrinolysis // inferred from direct assay","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from direct assay /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005488 // binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0051787 // misfolded protein binding // inferred by curator","chr5:176829158-176831473 (-) // 97.54 // q35.3"]
["11731541_at",-0.33488464,-0.35079813,-0.03212738,0.25700712,0.121087074,0.03212738,0.22139551,0.037376717,-1.2977483,-0.37601063,1.2977483,"down","SESTD1",91404,"0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from mutant phenotype","0034704 // calcium channel complex // inferred from physical interaction","0001786 // phosphatidylserine binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005545 // 1-phosphatidylinositol binding // inferred from direct assay /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from direct assay /// 0010314 // phosphatidylinositol-5-phosphate binding // inferred from direct assay /// 0031210 // phosphatidylcholine binding // inferred from direct assay /// 0032266 // phosphatidylinositol-3-phosphate binding // inferred from direct assay /// 0043325 // phosphatidylinositol-3,4-bisphosphate binding // inferred from direct assay /// 0070273 // phosphatidylinositol-4-phosphate binding // inferred from direct assay /// 0070300 // phosphatidic acid binding // inferred from direct assay /// 0080025 // phosphatidylinositol-3,5-bisphosphate binding // inferred from direct assay","chr2:179966420-180129517 (-) // 86.67 // q31.2"]
["11735218_at",-0.110710144,0.15798044,0.21964335,-0.17024708,-0.023484707,0.023484707,0.60117394,0.2809373,1.1062828,0.14572027,1.1062828,"up","COL10A1",1300,"0001501 // skeletal system development // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005581 // collagen // traceable author statement /// 0005938 // cell cortex // inferred from electronic annotation","0046872 // metal ion binding // inferred from electronic annotation","chr6:116440084-116447296 (-) // 97.71 // q22.1"]
["11719597_a_at",-0.116493225,-0.09600496,0.02015543,-0.02015543,0.10003042,0.079072,0.3760548,0.10661021,-1.08455,-0.117096595,1.08455,"down","EHD3",30845,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0032456 // endocytic recycling // inferred from direct assay /// 0051260 // protein homooligomerization // inferred from physical interaction /// 0072661 // protein targeting to plasma membrane // inferred from genetic interaction /// 0086036 // regulation of cardiac muscle cell membrane potential // inferred from genetic interaction","0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from direct assay /// 0055038 // recycling endosome membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // traceable author statement /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr2:31456879-31491259 (+) // 92.88 // p23.1"]
["11715360_x_at",0.017591476,-0.035380363,-0.121619225,0.024684906,0.010262489,-0.010262489,0.5808158,0.260953,-1.0386415,-0.05469771,1.0386415,"down","TIMP1",7076,"0001775 // cell activation // inferred from electronic annotation /// 0002576 // platelet degranulation // traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0010033 // response to organic substance // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0043249 // erythrocyte maturation // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0051045 // negative regulation of membrane protein ectodomain proteolysis // inferred from direct assay","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0031093 // platelet alpha granule lumen // traceable author statement","0004857 // enzyme inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008191 // metalloendopeptidase inhibitor activity // inferred from direct assay /// 0008191 // metalloendopeptidase inhibitor activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:47441642-47446188 (+) // 61.27 // p11.23"]
["11722881_at",-0.03485775,0.03485775,0.047832966,-0.04610014,-0.16333866,0.1490817,0.89208734,0.7226097,1.0253123,0.036063414,1.0253123,"up","KIAA1468",57614,"","","","chr18:59854502-59974553 (+) // 96.88 // q21.33"]
["11741915_a_at",0.073120356,0.009096861,0.123667955,-0.009096861,-0.06745124,-0.024733782,0.2624571,0.052255586,1.0735497,0.102389045,1.0735497,"up","ISM2",145501,"","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay","","chr14:77940739-77965210 (-) // 93.46 // q24.3"]
["11741935_at",0.10672498,0.007926464,0.30756903,-0.02662015,-0.007926464,-0.05414653,0.4128053,0.12876818,1.125296,0.17030454,1.125296,"up","LBX1",10660,"0001947 // heart looping // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007517 // muscle organ development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0021920 // regulation of transcription from RNA polymerase II promoter involved in spinal cord association neuron specification // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0048663 // neuron fate commitment // inferred from electronic annotation /// 0048664 // neuron fate determination // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation","0000976 // transcription regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr10:102986732-102988717 (-) // 89.29 // q24.31"]
["11741295_s_at",-0.16688204,0.09974861,0.060991764,-0.19898176,-0.016385078,0.016385078,0.81889236,0.57971513,1.045563,0.064279966,1.045563,"up","DDI2 /// RSC1A1","6248 /// 84301","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0050892 // intestinal absorption // inferred from electronic annotation /// 0051051 // negative regulation of transport // inferred from direct assay","0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005903 // brush border // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0004190 // aspartic-type endopeptidase activity // inferred from electronic annotation /// 0008200 // ion channel inhibitor activity // traceable author statement","chr1:15943952-15986748 (+) // 97.71 // p36.21"]
["11742947_at",0.11308956,0.039515495,0.19675541,-0.03951502,-0.1762209,-0.22449541,0.16776301,0.021315532,1.2001355,0.26319727,1.2001355,"up","GTF2H3",2967,"0000718 // nucleotide-excision repair, DNA damage removal // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // non-traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006360 // transcription from RNA polymerase I promoter // traceable author statement /// 0006361 // transcription initiation from RNA polymerase I promoter // traceable author statement /// 0006362 // transcription elongation from RNA polymerase I promoter // traceable author statement /// 0006363 // termination of RNA polymerase I transcription // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006370 // 7-methylguanosine mRNA capping // traceable author statement /// 0006412 // translation // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0050434 // positive regulation of viral transcription // traceable author statement","0000439 // core TFIIH complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005675 // holo TFIIH complex // inferred from direct assay /// 0005675 // holo TFIIH complex // non-traceable author statement","0003684 // damaged DNA binding // non-traceable author statement /// 0003684 // damaged DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0004672 // protein kinase activity // inferred from direct assay /// 0008094 // DNA-dependent ATPase activity // inferred from direct assay /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement /// 0008353 // RNA polymerase II carboxy-terminal domain kinase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction","chr12:124118320-124146187 (+) // 82.27 // q24.31"]
["11738280_x_at",-0.1802721,0.028896809,0.11911631,-0.0149850845,-0.03918743,0.0149850845,0.99290764,0.9807664,1.001602,0.0023094255,1.001602,"up","KLK12",43849,"0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // non-traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from direct assay","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // non-traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from direct assay /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr19:51532347-51537898 (-) // 89.64 // q13.41"]
["11734779_at",-0.064278126,0.03249073,0.06245613,-0.095635414,0.14087677,-0.03249073,0.980567,0.9443366,1.0041486,0.0059727873,1.0041486,"up","ZNF639",51193,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0019059 // initiation of viral infection // inferred from direct assay /// 0030307 // positive regulation of cell growth // inferred from mutant phenotype /// 0043922 // negative regulation by host of viral transcription // inferred from mutant phenotype /// 0043923 // positive regulation by host of viral transcription // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043621 // protein self-association // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:179041550-179053323 (+) // 75.67 // q26.33"]
["11729088_at",0.26047325,-0.0015594959,0.3822248,0.0015597343,-0.044727564,-0.051265955,0.3616023,0.09881381,1.1852494,0.24519072,1.1852494,"up","C8orf34",116328,"0007165 // signal transduction // inferred from electronic annotation","","0008603 // cAMP-dependent protein kinase regulator activity // inferred from electronic annotation","chr8:69350147-69731256 (+) // 76.72 // q13.2"]
["11724110_a_at",-0.109154224,-0.011067867,0.0033869743,-0.0033869743,0.15666723,0.012882233,0.5150741,0.2024156,-1.0675714,-0.09433256,1.0675714,"down","ARHGAP4",393,"0006915 // apoptotic process // traceable author statement /// 0007010 // cytoskeleton organization // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0032321 // positive regulation of Rho GTPase activity // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005925 // focal adhesion // inferred from direct assay","0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chrX:153172831-153191697 (-) // 97.06 // q28"]
["11760312_at",-0.13273859,0.038179636,0.25829816,-0.038179636,-0.21360397,0.04195571,0.7106247,0.41177616,1.0901468,0.124522395,1.0901468,"up","NAMPT",10135,"0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006769 // nicotinamide metabolic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from direct assay /// 0009435 // NAD biosynthetic process // inferred from electronic annotation /// 0019363 // pyridine nucleotide biosynthetic process // inferred from electronic annotation /// 0019674 // NAD metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051770 // positive regulation of nitric-oxide synthase biosynthetic process // inferred from direct assay /// 0060612 // adipose tissue development // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004514 // nicotinate-nucleotide diphosphorylase (carboxylating) activity // inferred from electronic annotation /// 0004516 // nicotinate phosphoribosyltransferase activity // inferred from electronic annotation /// 0005125 // cytokine activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0047280 // nicotinamide phosphoribosyltransferase activity // inferred from electronic annotation","chr7:105903603-105925397 (-) // 91.58 // q22.3"]
["11750175_s_at",0.8533001,0.08898115,0.1321783,-0.08898163,-0.1833396,-0.3227539,0.35649034,0.096320234,1.4707087,0.5565115,1.4707087,"up","LOC645954 /// SVIL","645954 /// 6840","0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from mutant phenotype","0002102 // podosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0015629 // actin cytoskeleton // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043034 // costamere // inferred from direct assay /// 0071437 // invadopodium // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from direct assay","chr10:30984849-31005942 (+) // 94.02 // p11.23"]
["11738927_at",-0.24000096,0.108175516,-0.025715113,-0.04009676,0.108175516,0.025715113,0.7639504,0.4890795,-1.0597898,-0.08377811,1.0597898,"down","OR5P3",120066,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:7846583-7847519 (-) // 100.0 // p15.4"]
["11723102_at",-0.6386409,-0.09206152,0.071789265,-0.057778835,0.6214037,0.057779312,0.54541713,0.22824529,-1.3442229,-0.4267724,1.3442229,"down","GNB4",59345,"0006112 // energy reserve metabolic process // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0071377 // cellular response to glucagon stimulus // traceable author statement","0005886 // plasma membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation","chr3:179113610-179169378 (-) // 82.48 // q26.33"]
["11724316_a_at",0.10568237,0.082475185,0.017223358,-0.029784203,-0.23064947,-0.017223835,0.35478306,0.09531271,1.1180718,0.16101283,1.1180718,"up","LUZP1",7798,"","0005634 // nucleus // inferred from electronic annotation","","chr1:23410028-23495351 (-) // 91.43 // p36.12"]
["11751195_a_at",0.033198357,-0.033198357,0.039898872,-0.16369867,-0.09629679,0.14434433,0.8403519,0.61906517,1.0365933,0.05185,1.0365933,"up","KCNQ5",56479,"0006461 // protein complex assembly // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008076 // voltage-gated potassium channel complex // inferred from electronic annotation /// 0008076 // voltage-gated potassium channel complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005242 // inward rectifier potassium channel activity // traceable author statement /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005249 // voltage-gated potassium channel activity // inferred from electronic annotation /// 0005267 // potassium channel activity // inferred from electronic annotation","chr6:73331833-73834370 (+) // 94.76 // q13"]
["11748783_a_at",-0.060445786,0.049749374,0.0019493103,-0.15209675,-0.0019493103,0.033708572,0.8302067,0.59918106,1.0261182,0.037196867,1.0261182,"up","UHRF1",29128,"0006281 // DNA repair // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from expression pattern /// 0008283 // cell proliferation // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0032270 // positive regulation of cellular protein metabolic process // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred by curator /// 2000373 // positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity // inferred by curator","0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0000987 // core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008327 // methyl-CpG binding // inferred from direct assay /// 0016874 // ligase activity // inferred from electronic annotation /// 0035064 // methylated histone residue binding // inferred from direct assay /// 0042393 // histone binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:4909509-4961182 (+) // 96.39 // p13.3"]
["11751867_a_at",0.12388229,-0.0841341,-0.059399605,0.2760744,0.059399605,-0.089383125,0.78234833,0.5168615,-1.0633236,-0.08858074,1.0633236,"down","C8orf59",401466,"","","","chr8:86129391-86132569 (-) // 77.09 // q21.2"]
["11746024_at",0.12322664,-0.079408646,0.079408646,-0.46201587,-0.14287281,0.12938213,0.650045,0.33358625,1.1483622,0.19957769,1.1483622,"up","LOC100293044",100293044,"","","","chr19:35167094-35168486 (-) // 47.96 // q13.11"]
["11756182_s_at",-0.15856266,-0.1133194,-0.10865879,0.28398418,0.29494,0.10865879,0.0807667,0.0046682646,-1.279909,-0.35604125,1.279909,"down","PSAT1",29968,"0006564 // L-serine biosynthetic process // non-traceable author statement /// 0006564 // L-serine biosynthetic process // traceable author statement /// 0006564 // L-serine biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008615 // pyridoxine biosynthetic process // non-traceable author statement /// 0008652 // cellular amino acid biosynthetic process // traceable author statement /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005829 // cytosol // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004648 // O-phospho-L-serine:2-oxoglutarate aminotransferase activity // non-traceable author statement /// 0004648 // O-phospho-L-serine:2-oxoglutarate aminotransferase activity // traceable author statement /// 0004648 // O-phospho-L-serine:2-oxoglutarate aminotransferase activity // inferred from electronic annotation /// 0008483 // transaminase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation","chr9:80944489-80945009 (+) // 67.84 // q21.2"]
["11753085_a_at",-0.051446915,-0.09766197,-0.12211418,0.44745827,0.37149143,0.051446915,0.21893759,0.03652533,-1.301829,-0.38053992,1.301829,"down","LOC100652805 /// LOC100653302 /// PGK1","100652805 /// 100653302 /// 5230","0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006096 // glycolysis // inferred from electronic annotation /// 0006096 // glycolysis // traceable author statement /// 0016310 // phosphorylation // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004618 // phosphoglycerate kinase activity // not recorded /// 0004618 // phosphoglycerate kinase activity // inferred from sequence or structural similarity /// 0004618 // phosphoglycerate kinase activity // inferred from electronic annotation /// 0004618 // phosphoglycerate kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chrX:77359742-77381464 (+) // 100.0 // q21.1"]
["11720576_a_at",-0.0010175705,0.08420944,0.0010180473,-0.11783743,0.050851345,-0.22432566,0.5294123,0.21434283,1.0906392,0.12517396,1.0906392,"up","ARFGEF1",10565,"0006887 // exocytosis // traceable author statement /// 0016192 // vesicle-mediated transport // not recorded /// 0032012 // regulation of ARF protein signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005802 // trans-Golgi network // not recorded","0005085 // guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005086 // ARF guanyl-nucleotide exchange factor activity // not recorded /// 0005086 // ARF guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008060 // ARF GTPase activator activity // inferred from direct assay /// 0017022 // myosin binding // inferred from physical interaction","chr8:68109904-68256162 (-) // 98.53 // q13.2"]
["11716044_a_at",-0.10185814,-0.32188416,-0.39118958,0.3129568,0.15974712,0.10185814,0.1292551,0.012591872,-1.3785625,-0.46316463,1.3785625,"down","FAM168B",130074,"","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","","chr2:131805448-131851033 (-) // 98.73 // q21.1"]
["11738919_at",-0.12278056,0.20989251,-0.18780231,-0.07455373,0.07455349,0.094680786,0.85845417,0.6529431,-1.0461746,-0.06512371,1.0461746,"down","TAS2R50",259296,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050909 // sensory perception of taste // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation","chr12:11138511-11139511 (-) // 100.0 // p13.2"]
["11743097_a_at",-0.14740753,0.011177063,-0.017953873,0.026668549,-0.011177063,0.024383545,0.5869309,0.26746005,-1.0458577,-0.06468653,1.0458577,"down","ITPK1",3705,"0007165 // signal transduction // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032957 // inositol trisphosphate metabolic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003824 // catalytic activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047325 // inositol tetrakisphosphate 1-kinase activity // inferred from electronic annotation /// 0052725 // inositol-1,3,4-trisphosphate 6-kinase activity // inferred from electronic annotation /// 0052726 // inositol-1,3,4-trisphosphate 5-kinase activity // inferred from electronic annotation","chr14:93406068-93582263 (-) // 94.85 // q32.12"]
["11728596_a_at",0.02314949,0.13288236,0.19133234,-0.07614231,-0.07960558,-0.023149252,0.19504772,0.028924609,1.1292934,0.1754204,1.1292934,"up","FAM180A",389558,"","0005576 // extracellular region // inferred from electronic annotation","","chr7:135414346-135433594 (-) // 83.34 // q33"]
["11750649_at",-0.18394947,-0.03970146,-0.30861664,0.19369268,0.03970146,0.21181726,0.1870999,0.02651099,-1.2533821,-0.3258263,1.2533821,"down","SMCR5",140771,"","","","chr17:17680119-17682843 (-) // 56.96 // p11.2"]
["11742459_a_at",-0.16517377,-0.064445496,0.012116909,-0.012116909,0.11868048,0.21400404,0.35897204,0.09750969,-1.1323788,-0.17935666,1.1323788,"down","GPR111",222611,"0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement","chr6:47624325-47658337 (+) // 92.1 // p12.3"]
["11727993_at",-0.09435964,0.05125141,-0.084088564,0.0645318,-0.051251173,0.25455308,0.5809853,0.2612346,-1.0955663,-0.13167676,1.0955663,"down","STX11",8676,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006944 // cellular membrane fusion // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005484 // SNAP receptor activity // inferred from electronic annotation /// 0005484 // SNAP receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr6:144471653-144513075 (+) // 80.96 // q24.2"]
["11741336_at",-0.16225052,-0.019994259,0.019993782,-0.035499096,0.121016026,0.33871555,0.4906006,0.18371575,-1.1451166,-0.19549446,1.1451166,"down","CACNG7",59284,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // non-traceable author statement /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // non-traceable author statement /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation /// 2000311 // regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity // inferred from direct assay /// 2000311 // regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity // inferred from electronic annotation","0005891 // voltage-gated calcium channel complex // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032281 // alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex // inferred from sequence or structural similarity /// 0032281 // alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005245 // voltage-gated calcium channel activity // non-traceable author statement /// 0005262 // calcium channel activity // inferred from electronic annotation","chr19:54416040-54446938 (+) // 97.8 // q13.42"]
["11738620_a_at",0.058655262,0.0902195,-0.058655262,-0.22742987,-0.1270647,0.105440855,0.6682224,0.35607225,1.0815431,0.11309114,1.0815431,"up","NLGN4Y",22829,"0007155 // cell adhesion // inferred from electronic annotation /// 0007416 // synapse assembly // not recorded","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // not recorded /// 0009986 // cell surface // not recorded /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // not recorded /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004091 // carboxylesterase activity // not recorded /// 0004872 // receptor activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0042043 // neurexin family protein binding // not recorded","chrY:16635778-16955527 (+) // 99.62 // q11.221"]
["11732961_at",-0.00843811,-0.064567566,0.29468298,-0.27024603,0.00843811,0.053309917,0.6987947,0.39505705,1.1044987,0.14339177,1.1044987,"up","ZP2",7783,"0006828 // manganese ion transport // inferred from sequence or structural similarity /// 0006886 // intracellular protein transport // inferred from sequence or structural similarity /// 0007338 // single fertilization // inferred from electronic annotation /// 0007339 // binding of sperm to zona pellucida // inferred from sequence or structural similarity /// 0007339 // binding of sperm to zona pellucida // traceable author statement /// 0060046 // regulation of acrosome reaction // inferred from direct assay /// 0060468 // prevention of polyspermy // inferred from sequence or structural similarity","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005771 // multivesicular body // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030141 // secretory granule // inferred from sequence or structural similarity /// 0031012 // extracellular matrix // inferred from sequence or structural similarity","0004872 // receptor activity // inferred from electronic annotation /// 0015026 // coreceptor activity // traceable author statement /// 0032190 // acrosin binding // inferred from physical interaction","chr16:21208772-21225831 (-) // 97.56 // p12.2"]
["11752606_x_at",0.15035486,0.1833005,0.118374825,-0.12523746,-0.118374825,-0.13336611,0.020465193,0.00013648403,1.2111152,0.27633613,1.2111152,"up","LOC100653301 /// NRBP2","100653301 /// 340371","0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0016242 // negative regulation of macroautophagy // inferred from mutant phenotype /// 0030182 // neuron differentiation // inferred from sequence or structural similarity /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from sequence or structural similarity /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // non-traceable author statement /// 0004672 // protein kinase activity // non-traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr8:144917699-144922385 (-) // 100.0 // q24.3"]
["11750071_x_at",-0.41894197,-0.10939121,0.04832506,-0.04832506,0.07915497,0.13104486,0.5356055,0.21980481,-1.1598682,-0.21396093,1.1598682,"down","ATG2A",23130,"","","0005515 // protein binding // inferred from physical interaction","chr11:64681119-64684681 (-) // 100.0 // q13.1"]
["11747604_a_at",-0.08682251,-0.025829315,-0.2898097,0.025829315,0.06767607,0.25076056,0.32031545,0.07778487,-1.1883082,-0.2489091,1.1883082,"down","KIAA1875",340390,"","","","chr8:145164487-145166823 (+) // 99.66 // q24.3"]
["11733382_a_at",-0.22382736,0.13880491,0.100200176,-0.08504248,-0.15138817,0.08504248,0.88240206,0.7015985,1.039235,0.055521917,1.039235,"up","AFAP1",60312,"0009966 // regulation of signal transduction // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005884 // actin filament // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay","0003779 // actin binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0042169 // SH2 domain binding // inferred from electronic annotation","chr4:7760439-7941653 (-) // 98.02 // p16.1"]
["11737841_a_at",-0.009538174,-0.0027661324,-0.06688261,0.2549367,0.0027661324,0.12554121,0.38352898,0.1110472,-1.1127609,-0.15414363,1.1127609,"down","FAM214B",80256,"","0005634 // nucleus // inferred from direct assay","","chr9:35104119-35115975 (-) // 96.23 // p13.3"]
["11722346_a_at",0.17797661,0.0017552376,-0.0017557144,0.12660027,-0.06453514,-0.1195631,0.7422329,0.45648938,1.0559133,0.07849142,1.0559133,"up","ACSS2",55902,"0006069 // ethanol oxidation // traceable author statement /// 0006085 // acetyl-CoA biosynthetic process // inferred from electronic annotation /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred by curator /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003987 // acetate-CoA ligase activity // inferred from direct assay /// 0003987 // acetate-CoA ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016208 // AMP binding // inferred by curator /// 0016208 // AMP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation","chr20:33462744-33515762 (+) // 98.69 // q11.22"]
["11740080_at",-0.12522411,0.07201433,0.056380987,-0.3916366,-0.04857111,0.04857135,0.71883655,0.4234725,1.0955099,0.1316025,1.0955099,"up","CXorf21",80231,"","","","chrX:30576940-30596033 (-) // 84.89 // p21.2"]
["11761171_x_at",0.017755508,-0.13812304,-0.017755508,0.05109787,-0.017755508,0.34509754,0.5444756,0.22733606,-1.1267657,-0.17218758,1.1267657,"down","SPHK2",56848,"0001568 // blood vessel development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006669 // sphinganine-1-phosphate biosynthetic process // non-traceable author statement /// 0006670 // sphingosine metabolic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // non-traceable author statement /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008283 // cell proliferation // non-traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048511 // rhythmic process // inferred from electronic annotation","0005624 // membrane fraction // inferred from direct assay /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0004143 // diacylglycerol kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008481 // sphinganine kinase activity // non-traceable author statement /// 0008481 // sphinganine kinase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0017016 // Ras GTPase binding // non-traceable author statement /// 0017050 // D-erythro-sphingosine kinase activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr19:49128190-49133973 (+) // 88.74 // q13.33"]
["11759507_at",-0.12376213,0,0.11972213,-0.15994835,0.09280515,0,0.9448406,0.84658724,1.0146867,0.021034347,1.0146867,"up","ZNF292",23036,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:87865266-87973914 (+) // 98.71 // q14.3"]
["11722538_a_at",-0.018033504,0.028059483,-0.027673721,0.11493063,-0.04703331,0.018033981,0.789326,0.5286161,-1.0242205,-0.034526292,1.0242205,"down","TMCO6",55374,"0006606 // protein import into nucleus // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008565 // protein transporter activity // inferred from electronic annotation","chr5:140019011-140024989 (+) // 96.95 // q31.3"]
["11720667_a_at",-0.13372803,-0.06348896,0.22851157,0.06348896,-0.12586188,0.18568087,0.94272995,0.84091014,-1.0214872,-0.030671177,1.0214872,"down","KAT2B",8850,"0006338 // chromatin remodeling // non-traceable author statement /// 0006338 // chromatin remodeling // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006360 // transcription from RNA polymerase I promoter // traceable author statement /// 0006361 // transcription initiation from RNA polymerase I promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006473 // protein acetylation // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0010467 // gene expression // traceable author statement /// 0016573 // histone acetylation // inferred from electronic annotation /// 0018076 // N-terminal peptidyl-lysine acetylation // inferred from direct assay /// 0018393 // internal peptidyl-lysine acetylation // inferred from electronic annotation /// 0018394 // peptidyl-lysine acetylation // inferred from direct assay /// 0032869 // cellular response to insulin stimulus // inferred from direct assay /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045736 // negative regulation of cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0000123 // histone acetyltransferase complex // inferred from electronic annotation /// 0000125 // PCAF complex // non-traceable author statement /// 0000776 // kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005671 // Ada2/Gcn5/Ada3 transcription activator complex // inferred from direct assay /// 0016585 // chromatin remodeling complex // inferred from direct assay /// 0031672 // A band // inferred from electronic annotation /// 0031674 // I band // inferred from electronic annotation /// 0042641 // actomyosin // inferred from electronic annotation","0003712 // transcription cofactor activity // inferred from physical interaction /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0004468 // lysine N-acetyltransferase activity // inferred from direct assay /// 0004468 // lysine N-acetyltransferase activity // inferred from sequence or structural similarity /// 0004468 // lysine N-acetyltransferase activity // inferred from electronic annotation /// 0004861 // cyclin-dependent protein kinase inhibitor activity // inferred from sequence or structural similarity /// 0004861 // cyclin-dependent protein kinase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008080 // N-acetyltransferase activity // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0016407 // acetyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from sequence or structural similarity /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from physical interaction","chr3:20081523-20195896 (+) // 93.13 // p24.3"]
["11732524_a_at",0.37590647,-0.14456272,-0.042954445,0.3549404,0.042954445,-0.0933795,0.9500268,0.8609667,-1.027194,-0.038708713,1.027194,"down","CHKB-CPT1B /// CPT1B","1375 /// 386593","0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006635 // fatty acid beta-oxidation // inferred from electronic annotation /// 0006635 // fatty acid beta-oxidation // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006853 // carnitine shuttle // traceable author statement /// 0015909 // long-chain fatty acid transport // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046320 // regulation of fatty acid oxidation // traceable author statement","0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004095 // carnitine O-palmitoyltransferase activity // inferred from electronic annotation /// 0004095 // carnitine O-palmitoyltransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr22:51007289-51021394 (-) // 95.34 // q13.33"]
["11744502_a_at",0.16477299,-0.023341179,0.023341179,0.079226494,-0.11103058,-0.16278744,0.58600426,0.26632345,1.0865753,0.11978812,1.0865753,"up","PNISR",25957,"","0005634 // nucleus // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","","chr6:99856014-99873184 (-) // 89.06 // q16.2"]
["11753579_a_at",0.07726288,0.019931793,-0.10439587,0.18649578,-0.019931793,-0.10588646,0.940559,0.83529717,-1.0158069,-0.022626197,1.0158069,"down","IL6ST",3572,"0002675 // positive regulation of acute inflammatory response // inferred by curator /// 0002821 // positive regulation of adaptive immune response // inferred by curator /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0006642 // triglyceride mobilization // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007259 // JAK-STAT cascade // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008593 // regulation of Notch signaling pathway // inferred from electronic annotation /// 0010575 // positive regulation vascular endothelial growth factor production // traceable author statement /// 0010613 // positive regulation of cardiac muscle hypertrophy // traceable author statement /// 0014911 // positive regulation of smooth muscle cell migration // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from direct assay /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0034097 // response to cytokine stimulus // inferred from direct assay /// 0038154 // interleukin-11-mediated signaling pathway // inferred from electronic annotation /// 0038165 // oncostatin-M-mediated signaling pathway // inferred from direct assay /// 0042102 // positive regulation of T cell proliferation // inferred from mutant phenotype /// 0042511 // positive regulation of tyrosine phosphorylation of Stat1 protein // inferred from mutant phenotype /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from mutant phenotype /// 0045669 // positive regulation of osteoblast differentiation // inferred from mutant phenotype /// 0045768 // positive regulation of anti-apoptosis // traceable author statement /// 0048711 // positive regulation of astrocyte differentiation // inferred from electronic annotation /// 0048861 // leukemia inhibitory factor signaling pathway // inferred from genetic interaction /// 0051481 // reduction of cytosolic calcium ion concentration // inferred from electronic annotation /// 0070102 // interleukin-6-mediated signaling pathway // inferred from direct assay /// 0070102 // interleukin-6-mediated signaling pathway // inferred from genetic interaction /// 0070104 // negative regulation of interleukin-6-mediated signaling pathway // inferred from direct assay /// 0070106 // interleukin-27-mediated signaling pathway // inferred by curator /// 0070106 // interleukin-27-mediated signaling pathway // inferred from mutant phenotype /// 0070120 // ciliary neurotrophic factor-mediated signaling pathway // inferred from direct assay","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005896 // interleukin-6 receptor complex // inferred from direct assay /// 0005900 // oncostatin-M receptor complex // inferred from direct assay /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation /// 0070110 // ciliary neurotrophic factor receptor complex // inferred from direct assay","0004872 // receptor activity // inferred from electronic annotation /// 0004896 // cytokine receptor activity // inferred from electronic annotation /// 0004897 // ciliary neurotrophic factor receptor activity // inferred from direct assay /// 0004915 // interleukin-6 receptor activity // inferred from direct assay /// 0004915 // interleukin-6 receptor activity // inferred from genetic interaction /// 0004921 // interleukin-11 receptor activity // inferred from electronic annotation /// 0004923 // leukemia inhibitory factor receptor activity // inferred from genetic interaction /// 0004924 // oncostatin-M receptor activity // inferred from direct assay /// 0005127 // ciliary neurotrophic factor receptor binding // inferred from physical interaction /// 0005138 // interleukin-6 receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0019838 // growth factor binding // inferred from physical interaction /// 0019970 // interleukin-11 binding // inferred from electronic annotation /// 0019981 // interleukin-6 binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // traceable author statement /// 0045509 // interleukin-27 receptor activity // inferred by curator","chr5:55237592-55272106 (-) // 100.0 // q11.2"]
["11735884_at",-0.3795681,0.07556915,-0.20428324,-0.032548904,0.032548904,0.18985605,0.5001511,0.19112971,-1.1750424,-0.2327128,1.1750424,"down","NF2",4771,"0001707 // mesoderm formation // inferred from electronic annotation /// 0001953 // negative regulation of cell-matrix adhesion // traceable author statement /// 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0007398 // ectoderm development // inferred from electronic annotation /// 0008156 // negative regulation of DNA replication // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0014010 // Schwann cell proliferation // inferred from mutant phenotype /// 0022408 // negative regulation of cell-cell adhesion // inferred from direct assay /// 0030036 // actin cytoskeleton organization // inferred from mutant phenotype /// 0030336 // negative regulation of cell migration // traceable author statement /// 0035330 // regulation of hippo signaling cascade // inferred from mutant phenotype /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042518 // negative regulation of tyrosine phosphorylation of Stat3 protein // inferred from direct assay /// 0042524 // negative regulation of tyrosine phosphorylation of Stat5 protein // inferred from direct assay /// 0043409 // negative regulation of MAPK cascade // inferred from electronic annotation /// 0045216 // cell-cell junction organization // inferred from electronic annotation /// 0046426 // negative regulation of JAK-STAT cascade // inferred from direct assay /// 0051496 // positive regulation of stress fiber assembly // inferred from mutant phenotype /// 0070306 // lens fiber cell differentiation // inferred from electronic annotation","0001726 // ruffle // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019898 // extrinsic to membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0030864 // cortical actin cytoskeleton // inferred from electronic annotation /// 0031527 // filopodium membrane // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation","chr22:29999544-30079903 (+) // 98.37 // q12.2"]
["11755015_s_at",-0.17918777,-0.17034912,-0.14850521,0.22655678,0.17933464,0.14850521,0.02049154,0.00013731551,-1.275279,-0.35081294,1.275279,"down","CPS1",1373,"0000050 // urea cycle // non-traceable author statement /// 0000050 // urea cycle // traceable author statement /// 0000050 // urea cycle // inferred from electronic annotation /// 0001101 // response to acid // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0005980 // glycogen catabolic process // inferred from mutant phenotype /// 0006543 // glutamine catabolic process // inferred from electronic annotation /// 0006807 // nitrogen compound metabolic process // inferred from electronic annotation /// 0007494 // midgut development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009636 // response to toxin // inferred from electronic annotation /// 0010043 // response to zinc ion // inferred from electronic annotation /// 0014075 // response to amine stimulus // inferred from electronic annotation /// 0019240 // citrulline biosynthetic process // non-traceable author statement /// 0019433 // triglyceride catabolic process // inferred from mutant phenotype /// 0032094 // response to food // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from direct assay /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0033762 // response to glucagon stimulus // inferred from electronic annotation /// 0034201 // response to oleic acid // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0042594 // response to starvation // inferred from electronic annotation /// 0043200 // response to amino acid stimulus // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from electronic annotation /// 0045909 // positive regulation of vasodilation // inferred from mutant phenotype /// 0046209 // nitric oxide metabolic process // inferred from mutant phenotype /// 0048545 // response to steroid hormone stimulus // inferred from electronic annotation /// 0050667 // homocysteine metabolic process // inferred from direct assay /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation /// 0055081 // anion homeostasis // inferred from electronic annotation /// 0060416 // response to growth hormone stimulus // inferred from electronic annotation /// 0070365 // hepatocyte differentiation // inferred from electronic annotation /// 0070409 // carbamoyl phosphate biosynthetic process // inferred from electronic annotation /// 0070409 // carbamoyl phosphate biosynthetic process // inferred from mutant phenotype /// 0071320 // cellular response to cAMP // inferred from electronic annotation /// 0071377 // cellular response to glucagon stimulus // inferred from electronic annotation /// 0071400 // cellular response to oleic acid // inferred from electronic annotation /// 0071548 // response to dexamethasone stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0042645 // mitochondrial nucleoid // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004087 // carbamoyl-phosphate synthase (ammonia) activity // inferred from mutant phenotype /// 0004087 // carbamoyl-phosphate synthase (ammonia) activity // inferred from electronic annotation /// 0004175 // endopeptidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016595 // glutamate binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0072341 // modified amino acid binding // inferred from direct assay","chr2:211536338-211543829 (+) // 72.31 // q34"]
["11722089_a_at",0.2990551,-0.0027418137,-0.075390816,0.4133005,0.0027418137,-0.06974125,0.94088227,0.8359149,-1.0293922,-0.041792814,1.0293922,"down","EML3",256364,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation","","chr11:62369690-62380237 (-) // 94.76 // q12.3"]
["11742965_a_at",0.11401892,-0.015787125,-0.2634225,0.20918274,0.015787125,-0.20789671,0.8948778,0.7292705,-1.0430112,-0.060754634,1.0430112,"down","MTERFD2",130916,"0006390 // transcription from mitochondrial promoter // inferred from electronic annotation /// 0006626 // protein targeting to mitochondrion // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0042255 // ribosome assembly // inferred from electronic annotation /// 0043010 // camera-type eye development // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005762 // mitochondrial large ribosomal subunit // inferred from direct assay","0019843 // rRNA binding // inferred from direct assay","chr2:242026510-242041714 (-) // 87.6 // q37.3"]
["11761833_x_at",-0.24870825,0.1511712,0.20251608,-0.16981411,-0.1511712,0.39095402,0.9872062,0.9624097,1.008122,0.011670194,1.008122,"up","PI16",221476,"0006508 // proteolysis // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008233 // peptidase activity // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr6:36922513-36932139 (+) // 97.87 // p21.2"]
["11747420_s_at",0.040678978,0.05094719,-0.040678978,-0.05016136,-0.092683315,0.09095001,0.8369083,0.6131375,1.0240461,0.034280613,1.0240461,"up","ARF3",377,"0006184 // GTP catabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation /// 0005525 // GTP binding // traceable author statement","chr12:49331805-49351270 (-) // 92.76 // q13.12"]
["11718131_a_at",0.025463104,-0.04855895,0.018422604,-0.018422604,-0.058059216,0.30436492,0.79861724,0.54440814,-1.0552016,-0.077518724,1.0552016,"down","OLFM4",10562,"0007155 // cell adhesion // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","","chr13:53602875-53626192 (+) // 97.25 // q14.3"]
["11757473_x_at",0.108397484,-0.09495163,-0.13927364,0.07039833,-0.065434456,0.065434456,0.7716166,0.49984497,-1.0463814,-0.06540874,1.0463814,"down","NSUN5",55695,"0032259 // methylation // inferred from electronic annotation","","0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr7:72717225-72717740 (-) // 87.23 // q11.23"]
["11745981_a_at",-0.10212803,-0.020645618,0.020645618,-0.16498709,0.024320126,0.12994218,0.9097844,0.76089066,-1.0213432,-0.030467777,1.0213432,"down","GRAMD1C",54762,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:113616317-113666018 (+) // 99.86 // q13.31"]
["11734847_x_at",-0.35536742,0.030289173,0.19229794,-0.21827936,-0.030289173,0.056056976,0.9711334,0.9179319,1.0138965,0.019910337,1.0138965,"up","ERBB2IP",55914,"0007049 // cell cycle // non-traceable author statement /// 0007155 // cell adhesion // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007229 // integrin-mediated signaling pathway // non-traceable author statement /// 0016049 // cell growth // non-traceable author statement /// 0045104 // intermediate filament cytoskeleton organization // non-traceable author statement /// 0045175 // basal protein localization // non-traceable author statement /// 0045197 // establishment or maintenance of epithelial cell apical/basal polarity // non-traceable author statement","0005604 // basement membrane // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0009925 // basal plasma membrane // non-traceable author statement /// 0030054 // cell junction // inferred from electronic annotation /// 0030056 // hemidesmosome // inferred from direct assay /// 0030056 // hemidesmosome // inferred from electronic annotation","0005176 // ErbB-2 class receptor binding // traceable author statement /// 0005178 // integrin binding // inferred from physical interaction /// 0005200 // structural constituent of cytoskeleton // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr5:65222195-65376850 (+) // 98.8 // q12.3"]
["11729264_x_at",-0.015478134,-0.023400307,-0.064266205,0.015478134,0.12474346,0.08341789,0.21893759,0.036591955,-1.0784266,-0.10892799,1.0784266,"down","ADAT1",23536,"0006396 // RNA processing // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from mutant phenotype /// 0008033 // tRNA processing // inferred from electronic annotation","","0003723 // RNA binding // inferred from mutant phenotype /// 0003723 // RNA binding // inferred from electronic annotation /// 0004000 // adenosine deaminase activity // inferred from electronic annotation /// 0008251 // tRNA-specific adenosine deaminase activity // inferred from mutant phenotype /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:74413492-75657203 (-) // 78.02 // q23.1"]
["11727545_at",0.18908024,0.0338583,0.046840668,-0.0338583,-0.35293007,-0.39418173,0.2509803,0.04786892,1.2747813,0.3502498,1.2747813,"up","PANK3",79646,"0015937 // coenzyme A biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004594 // pantothenate kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr5:167982377-168006610 (-) // 88.16 // q34"]
["11715883_x_at",-0.06362343,-0.00484848,-0.062615395,0.00484848,0.06164646,0.00803566,0.28801343,0.06264052,-1.0486544,-0.068539344,1.0486544,"down","DAP3",7818,"0006915 // apoptotic process // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0008637 // apoptotic mitochondrial changes // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0005761 // mitochondrial ribosome // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:155657660-155708797 (+) // 85.08 // q22"]
["11762182_a_at",0.025290966,-0.17535996,0.2789755,-0.13508844,-0.025290966,0.1316948,0.9042388,0.7479328,1.0370823,0.052530408,1.0370823,"up","PPP5C",5536,"0006351 // transcription, DNA-dependent // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006470 // protein dephosphorylation // traceable author statement /// 0007067 // mitosis // traceable author statement /// 0007165 // signal transduction // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype /// 0043278 // response to morphine // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // traceable author statement /// 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:46886412-46891192 (+) // 84.05 // q13.32"]
["11720131_a_at",-0.027849197,-0.037406445,0.08215523,0.027849197,0.03071022,-0.09320068,0.9148477,0.77441466,1.0119797,0.01718035,1.0119797,"up","SPIRE1",56907,"0006810 // transport // inferred from electronic annotation /// 0048193 // Golgi vesicle transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation","chr18:12443294-12658133 (-) // 69.78 // p11.21"]
["11744020_at",0.31424713,-0.20638275,-0.30205727,0.5793867,0.039744377,-0.039744377,0.70109826,0.39827546,-1.1957036,-0.25785983,1.1957036,"down","NUP210",23225,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0010827 // regulation of glucose transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","0046983 // protein dimerization activity // inferred from electronic annotation","chr3:13357734-13461809 (-) // 97.59 // p25.1"]
["11743730_at",-0.05160737,0.019454718,0.022478819,-0.054610252,-0.019454718,0.1159873,0.9166241,0.7792517,-1.0119926,-0.017198702,1.0119926,"down","TNFSF10",8743,"0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from direct assay /// 2001238 // positive regulation of extrinsic apoptotic signaling pathway // inferred from direct assay","0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from electronic annotation /// 0005625 // soluble fraction // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005102 // receptor binding // traceable author statement /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005164 // tumor necrosis factor receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:172223302-172241297 (-) // 83.68 // q26.31"]
["11720275_a_at",-0.046125412,-0.08989477,-0.060977936,0.062254906,0.046125412,0.053554535,0.039552536,0.000939209,-1.086467,-0.11964439,1.086467,"down","CFLAR",8837,"0006508 // proteolysis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from mutant phenotype /// 0006916 // anti-apoptosis // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0031264 // death-inducing signaling complex // inferred from direct assay","0004197 // cysteine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation","chr2:201980681-202005162 (+) // 72.72 // q33.1"]
["11729624_at",-0.30630016,0.100311756,-0.2758956,0.13763046,-0.07697916,0.07697916,0.5461419,0.22890835,-1.1538893,-0.20650482,1.1538893,"down","DCAF7",10238,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred by curator /// 0016567 // protein ubiquitination // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0080008 // CUL4-RING ubiquitin ligase complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr17:61627800-61671630 (+) // 94.17 // q23.3"]
["11732893_at",0.22277737,0.00962019,0.001850605,-0.06678343,-0.016042233,-0.001850605,0.54673785,0.22941245,1.07647,0.10630813,1.07647,"up","CDKL3",51265,"0006464 // cellular protein modification process // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004693 // cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr5:133633885-133702783 (-) // 97.76 // q31.1"]
["11723442_at",-0.16813755,0.012381077,0.043547153,-0.5873015,-0.012381077,0.26178694,0.9194042,0.7856931,1.0535281,0.07522875,1.0535281,"up","EPHA4",2043,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // inferred from electronic annotation /// 0007628 // adult walking behavior // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from sequence or structural similarity /// 0008045 // motor axon guidance // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0021957 // corticospinal tract morphogenesis // inferred from sequence or structural similarity /// 0021957 // corticospinal tract morphogenesis // inferred from electronic annotation /// 0032314 // regulation of Rac GTPase activity // inferred from sequence or structural similarity /// 0032314 // regulation of Rac GTPase activity // inferred from electronic annotation /// 0032317 // regulation of Rap GTPase activity // inferred from sequence or structural similarity /// 0032317 // regulation of Rap GTPase activity // inferred from electronic annotation /// 0043507 // positive regulation of JUN kinase activity // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048013 // ephrin receptor signaling pathway // inferred from electronic annotation /// 0048681 // negative regulation of axon regeneration // inferred from sequence or structural similarity /// 0048681 // negative regulation of axon regeneration // inferred from electronic annotation /// 0048710 // regulation of astrocyte differentiation // inferred from sequence or structural similarity /// 0048710 // regulation of astrocyte differentiation // inferred from electronic annotation /// 0050770 // regulation of axonogenesis // inferred from sequence or structural similarity /// 0050770 // regulation of axonogenesis // inferred from electronic annotation /// 0061001 // regulation of dendritic spine morphogenesis // inferred from sequence or structural similarity /// 0061001 // regulation of dendritic spine morphogenesis // inferred from electronic annotation /// 0097155 // fasciculation of sensory neuron axon // inferred from sequence or structural similarity /// 0097155 // fasciculation of sensory neuron axon // inferred from electronic annotation /// 0097156 // fasciculation of motor neuron axon // inferred from sequence or structural similarity /// 0097156 // fasciculation of motor neuron axon // inferred from electronic annotation /// 2001108 // positive regulation of Rho guanyl-nucleotide exchange factor activity // inferred from direct assay","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from sequence or structural similarity /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030424 // axon // inferred from sequence or structural similarity /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from sequence or structural similarity /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005003 // ephrin receptor activity // inferred from electronic annotation /// 0005004 // GPI-linked ephrin receptor activity // inferred from sequence or structural similarity /// 0005004 // GPI-linked ephrin receptor activity // inferred from electronic annotation /// 0005005 // transmembrane-ephrin receptor activity // inferred from sequence or structural similarity /// 0005005 // transmembrane-ephrin receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0042731 // PH domain binding // inferred from physical interaction /// 0046875 // ephrin receptor binding // inferred from electronic annotation /// 0097161 // DH domain binding // inferred from direct assay","chr2:222282754-222438922 (-) // 98.45 // q36.1"]
["11735150_x_at",0.039928913,0.12495518,0.08429766,-0.34537697,-0.044594765,-0.039928913,0.35443583,0.0950833,1.1698802,0.22636074,1.1698802,"up","NXPE3",91775,"","0005576 // extracellular region // inferred from electronic annotation","","chr3:101498285-101547507 (+) // 80.86 // q12.3"]
["11722569_at",-0.22262144,0.09016228,-0.14599514,0.2320571,0.28900385,-0.090162754,0.50186616,0.19238457,-1.1780908,-0.23645075,1.1780908,"down","VEZT",55591,"0016337 // cell-cell adhesion // inferred from electronic annotation /// 0043009 // chordate embryonic development // inferred from electronic annotation","0001669 // acrosomal vesicle // inferred from electronic annotation /// 0002142 // stereocilia ankle link complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","","chr12:95611521-95696780 (+) // 95.01 // q22"]
["11720919_s_at",0.07089329,-0.13815498,-0.104478836,0.32641602,0.09309864,-0.07089329,0.5795836,0.2598534,-1.1277553,-0.17345405,1.1277553,"down","EIF1",10209,"0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // non-traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006413 // translational initiation // inferred from electronic annotation /// 0006446 // regulation of translational initiation // traceable author statement /// 0006950 // response to stress // non-traceable author statement","0005737 // cytoplasm // traceable author statement","0003743 // translation initiation factor activity // non-traceable author statement /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0003743 // translation initiation factor activity // traceable author statement /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement","chr17:39845142-39847898 (+) // 88.19 // q21.2"]
["11738688_s_at",-0.14783025,0.27791882,-0.012478352,-0.05213976,0.29976368,0.012478352,0.9206482,0.78866714,-1.0334706,-0.04749739,1.0334706,"down","OR5T1",390155,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:56043028-56044146 (+) // 100.0 // q12.1"]
["11720317_a_at",-0.06811714,0.090937614,0.13158226,0.008699417,-0.008699417,-0.052526474,0.65506464,0.3391032,1.0489721,0.06897635,1.0489721,"up","DAD1",1603,"0001824 // blastocyst development // inferred from electronic annotation /// 0006486 // protein glycosylation // inferred from sequence or structural similarity /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0007584 // response to nutrient // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // inferred by curator /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005789 // endoplasmic reticulum membrane // traceable author statement /// 0008250 // oligosaccharyltransferase complex // inferred from sequence or structural similarity /// 0008250 // oligosaccharyltransferase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004576 // oligosaccharyl transferase activity // inferred from sequence or structural similarity /// 0004579 // dolichyl-diphosphooligosaccharide-protein glycotransferase activity // inferred by curator /// 0004579 // dolichyl-diphosphooligosaccharide-protein glycotransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr14:23033804-23058145 (-) // 70.87 // q11.2"]
["11727905_a_at",-0.30259418,-0.19931316,-0.2842512,0.23756981,0.2998371,0.19931316,0.026111806,0.00030132057,-1.4217091,-0.50762624,1.4217091,"down","IL13RA1",3597,"0007166 // cell surface receptor signaling pathway // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005898 // interleukin-13 receptor complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004896 // cytokine receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chrX:117861257-117928929 (+) // 91.26 // q24"]
["11728084_a_at",0.53854084,0.40427208,0.067931175,-0.20111704,-0.067931175,-0.0967989,0.21339059,0.03453044,1.3744589,0.45886377,1.3744589,"up","DGKE",8526,"0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008654 // phospholipid biosynthetic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004143 // diacylglycerol kinase activity // inferred from electronic annotation /// 0004143 // diacylglycerol kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:54911459-54946036 (+) // 85.45 // q22"]
["11736876_a_at",-0.10604143,-0.12582994,0.13104868,0.007762432,0.12803555,-0.007762432,0.743372,0.4581982,-1.0543004,-0.076286025,1.0543004,"down","DTWD2",285605,"","","","chr5:118172445-118324240 (-) // 78.79 // q23.1"]
["11718379_x_at",0.18630266,0.057536602,0.08546591,-0.057536602,-0.13319302,-0.30535936,0.19754203,0.029634302,1.2101043,0.27513146,1.2101043,"up","PRKAG2",51422,"0005977 // glycogen metabolic process // inferred from mutant phenotype /// 0006110 // regulation of glycolysis // inferred from mutant phenotype /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006469 // negative regulation of protein kinase activity // inferred from direct assay /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006754 // ATP biosynthetic process // traceable author statement /// 0006853 // carnitine shuttle // traceable author statement /// 0007050 // cell cycle arrest // traceable author statement /// 0007243 // intracellular protein kinase cascade // inferred from mutant phenotype /// 0008152 // metabolic process // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0010800 // positive regulation of peptidyl-threonine phosphorylation // inferred from mutant phenotype /// 0016126 // sterol biosynthetic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019217 // regulation of fatty acid metabolic process // inferred from mutant phenotype /// 0042304 // regulation of fatty acid biosynthetic process // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045860 // positive regulation of protein kinase activity // inferred from mutant phenotype /// 0046320 // regulation of fatty acid oxidation // traceable author statement /// 0046324 // regulation of glucose import // traceable author statement /// 0050790 // regulation of catalytic activity // inferred from electronic annotation","0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0031588 // AMP-activated protein kinase complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004679 // AMP-activated protein kinase activity // inferred from electronic annotation /// 0004862 // cAMP-dependent protein kinase inhibitor activity // inferred from direct assay /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0008603 // cAMP-dependent protein kinase regulator activity // inferred from mutant phenotype /// 0008607 // phosphorylase kinase regulator activity // inferred from mutant phenotype /// 0016208 // AMP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from direct assay /// 0030295 // protein kinase activator activity // inferred from mutant phenotype /// 0043531 // ADP binding // inferred from direct assay","chr7:151253246-151574485 (-) // 93.81 // q36.1"]
["11754622_x_at",0.03562689,-0.03694725,0.01710987,-0.018430233,-0.01710987,0.20564699,0.79814917,0.5436108,-1.0362982,-0.051439144,1.0362982,"down","MEIS3",56917,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr19:47906381-47918195 (-) // 100.0 // q13.32"]
["11727818_a_at",-0.008889198,-0.089921,-0.16868877,0.26982975,0.06813717,0.008889198,0.34293324,0.08872678,-1.1525146,-0.20478499,1.1525146,"down","DDX46",9879,"0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0015030 // Cajal body // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr5:134094423-134167068 (+) // 88.58 // q31.1"]
["11722317_a_at",-0.088459015,-0.04734707,0.047347546,0.1387701,0.15076876,-0.23939848,0.9043487,0.74810386,-1.0325414,-0.04619962,1.0325414,"down","PTPN13",5783,"0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from direct assay /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0030027 // lamellipodium // inferred from direct assay /// 0030027 // lamellipodium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr4:87515459-87736314 (+) // 98.94 // q21.3"]
["11729748_a_at",0.013426781,2.5749207e-5,-0.07862854,-2.5749207e-5,-0.04577303,0.059174538,0.81063604,0.5650273,-1.018315,-0.026183845,1.018315,"down","IL10RA",3587,"0007165 // signal transduction // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // traceable author statement /// 0004872 // receptor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004920 // interleukin-10 receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr11:117857062-117872198 (+) // 87.77 // q23.3"]
["11748399_s_at",0.28798676,0.1330347,0.050928116,-0.050928116,-0.35927153,-0.4419608,0.208166,0.03280311,1.3578932,0.44137004,1.3578932,"up","VCL",7414,"0002009 // morphogenesis of an epithelium // inferred from mutant phenotype /// 0002576 // platelet degranulation // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0006936 // muscle contraction // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007160 // cell-matrix adhesion // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030032 // lamellipodium assembly // inferred from electronic annotation /// 0030032 // lamellipodium assembly // inferred from sequence or structural similarity /// 0030168 // platelet activation // traceable author statement /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // traceable author statement /// 0034333 // adherens junction assembly // inferred from mutant phenotype /// 0034394 // protein localization at cell surface // inferred from mutant phenotype /// 0043297 // apical junction assembly // inferred from mutant phenotype /// 0090136 // epithelial cell-cell adhesion // inferred from mutant phenotype","0001725 // stress fiber // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005884 // actin filament // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from sequence or structural similarity /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005912 // adherens junction // inferred from sequence or structural similarity /// 0005912 // adherens junction // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from direct assay /// 0005916 // fascia adherens // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from sequence or structural similarity /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030055 // cell-substrate junction // non-traceable author statement /// 0043034 // costamere // inferred from direct assay /// 0043034 // costamere // inferred from electronic annotation /// 0043034 // costamere // inferred from sequence or structural similarity /// 0043234 // protein complex // inferred from direct assay","0002162 // dystroglycan binding // inferred from physical interaction /// 0003779 // actin binding // inferred from direct assay /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from sequence or structural similarity /// 0017048 // Rho GTPase binding // inferred from electronic annotation /// 0045294 // alpha-catenin binding // inferred from physical interaction /// 0045296 // cadherin binding // inferred from sequence or structural similarity","chr10:75757873-75878237 (+) // 99.78 // q22.2"]
["11721706_at",0.124464035,0.20845795,0.22323608,-0.26009893,-0.14481974,-0.12446356,0.058770083,0.0022810325,1.2850698,0.36184675,1.2850698,"up","GPAM",57678,"0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006637 // acyl-CoA metabolic process // inferred from electronic annotation /// 0006641 // triglyceride metabolic process // inferred from electronic annotation /// 0006650 // glycerophospholipid metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0009750 // response to fructose stimulus // inferred from electronic annotation /// 0010867 // positive regulation of triglyceride biosynthetic process // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0016024 // CDP-diacylglycerol biosynthetic process // inferred from electronic annotation /// 0019432 // triglyceride biosynthetic process // inferred from direct assay /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0040018 // positive regulation of multicellular organism growth // inferred from electronic annotation /// 0042104 // positive regulation of activated T cell proliferation // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044255 // cellular lipid metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046686 // response to cadmium ion // inferred from electronic annotation /// 0050707 // regulation of cytokine secretion // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from electronic annotation /// 0055089 // fatty acid homeostasis // inferred from electronic annotation /// 0055091 // phospholipid homeostasis // inferred from electronic annotation /// 0070236 // negative regulation of activation-induced cell death of T cells // inferred from electronic annotation /// 0070970 // interleukin-2 secretion // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","0004366 // glycerol-3-phosphate O-acyltransferase activity // inferred from electronic annotation /// 0004366 // glycerol-3-phosphate O-acyltransferase activity // inferred from mutant phenotype /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation","chr10:113909623-113975153 (-) // 91.52 // q25.2"]
["11754764_a_at",-0.01041913,0.010418892,-0.050487757,-0.03879428,0.09975958,0.03139329,0.6542182,0.33820146,-1.0335553,-0.04761554,1.0335553,"down",-0.050487757,"RAB7B",338382,"0006810 // transport // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0032755 // positive regulation of interleukin-6 production // inferred from mutant phenotype /// 0034144 // negative regulation of toll-like receptor 4 signaling pathway // inferred from sequence or structural similarity /// 0034164 // negative regulation of toll-like receptor 9 signaling pathway // inferred from sequence or structural similarity /// 0034499 // late endosome to Golgi transport // inferred from mutant phenotype /// 0045654 // positive regulation of megakaryocyte differentiation // inferred from mutant phenotype /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype","0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0005770 // late endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation"]
["11716912_x_at",-0.07659149,-0.28538322,-0.38033295,0.41446304,0.10961056,0.07659149,0.20886853,0.033013374,-1.3638241,-0.44765761,1.3638241,"down","NR2F6",2063,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0030522 // intracellular receptor mediated signaling pathway // traceable author statement /// 0030522 // intracellular receptor mediated signaling pathway // inferred from electronic annotation /// 0043153 // entrainment of circadian clock by photoperiod // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // traceable author statement /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation /// 0050965 // detection of temperature stimulus involved in sensory perception of pain // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // traceable author statement /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0004887 // thyroid hormone receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:17342691-17356466 (-) // 89.61 // p13.11"]
["11747391_x_at",0.025471449,-0.07945156,-0.022069931,0.022069931,0.07945204,-0.17953539,0.9977449,0.99416965,1.0004537,0.0006544175,1.0004537,"up","FBXO44",93611,"0030163 // protein catabolic process // inferred from electronic annotation","0019005 // SCF ubiquitin ligase complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr1:11714927-11721923 (+) // 94.43 // p36.22"]
["11733521_at",-0.10804176,-0.106684685,-0.18476295,0.40911865,0.18288374,0.106684685,0.15358618,0.017881854,-1.2888272,-0.36605883,1.2888272,"down","NTSR1",4923,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0008344 // adult locomotory behavior // inferred from electronic annotation","0005783 // endoplasmic reticulum // traceable author statement /// 0005794 // Golgi apparatus // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0016492 // G-protein coupled neurotensin receptor activity // inferred from electronic annotation","chr20:61340188-61394123 (+) // 93.32 // q13.33"]
["11761143_x_at",-0.005531311,-0.3361702,-0.38998508,0.22552538,0.005531311,0.07317734,0.29315445,0.06489815,-1.2704211,-0.3453068,1.2704211,"down","TP53",7157,"0000060 // protein import into nucleus, translocation // inferred from electronic annotation /// 0000075 // cell cycle checkpoint // traceable author statement /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // not recorded /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000733 // DNA strand renaturation // inferred from direct assay /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001836 // release of cytochrome c from mitochondria // inferred from electronic annotation /// 0002309 // T cell proliferation involved in immune response // inferred from electronic annotation /// 0002326 // B cell lineage commitment // inferred from electronic annotation /// 0002360 // T cell lineage commitment // inferred from electronic annotation /// 0006284 // base-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // inferred from mutant phenotype /// 0006302 // double-strand break repair // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006461 // protein complex assembly // inferred from direct assay /// 0006915 // apoptotic process // inferred from direct assay /// 0006915 // apoptotic process // inferred from mutant phenotype /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // inferred from electronic annotation /// 0006978 // DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator // inferred from mutant phenotype /// 0006983 // ER overload response // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007050 // cell cycle arrest // inferred from mutant phenotype /// 0007265 // Ras protein signal transduction // inferred from expression pattern /// 0007275 // multicellular organismal development // inferred from mutant phenotype /// 0007369 // gastrulation // inferred from electronic annotation /// 0007406 // negative regulation of neuroblast proliferation // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0007569 // cell aging // inferred from mutant phenotype /// 0007569 // cell aging // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008104 // protein localization // inferred from direct assay /// 0008156 // negative regulation of DNA replication // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008340 // determination of adult lifespan // inferred from sequence or structural similarity /// 0008340 // determination of adult lifespan // inferred from electronic annotation /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0009303 // rRNA transcription // inferred from electronic annotation /// 0009411 // response to UV // inferred from electronic annotation /// 0009792 // embryo development ending in birth or egg hatching // inferred from electronic annotation /// 0010165 // response to X-ray // not recorded /// 0010165 // response to X-ray // inferred from electronic annotation /// 0010332 // response to gamma radiation // inferred from mutant phenotype /// 0010332 // response to gamma radiation // inferred from electronic annotation /// 0030154 // cell differentiation // traceable author statement /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from direct assay /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from mutant phenotype /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0031065 // positive regulation of histone deacetylation // not recorded /// 0031065 // positive regulation of histone deacetylation // inferred from electronic annotation /// 0031571 // mitotic cell cycle G1/S transition DNA damage checkpoint // inferred from mutant phenotype /// 0031571 // mitotic cell cycle G1/S transition DNA damage checkpoint // inferred from electronic annotation /// 0032461 // positive regulation of protein oligomerization // inferred from direct assay /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0034613 // cellular protein localization // inferred from direct assay /// 0034644 // cellular response to UV // not recorded /// 0034644 // cellular response to UV // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0035690 // cellular response to drug // inferred from expression pattern /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042149 // cellular response to glucose starvation // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation /// 0042771 // DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis // inferred from direct assay /// 0042771 // DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043523 // regulation of neuron apoptotic process // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // not recorded /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046677 // response to antibiotic // inferred from expression pattern /// 0046902 // regulation of mitochondrial membrane permeability // traceable author statement /// 0046902 // regulation of mitochondrial membrane permeability // inferred from electronic annotation /// 0048147 // negative regulation of fibroblast proliferation // inferred from mutant phenotype /// 0048147 // negative regulation of fibroblast proliferation // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from sequence or structural similarity /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0051097 // negative regulation of helicase activity // traceable author statement /// 0051262 // protein tetramerization // traceable author statement /// 0051262 // protein tetramerization // inferred from electronic annotation /// 0051276 // chromosome organization // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0070245 // positive regulation of thymocyte apoptotic process // inferred from sequence or structural similarity /// 0070245 // positive regulation of thymocyte apoptotic process // inferred from electronic annotation /// 0071158 // positive regulation of cell cycle arrest // inferred from mutant phenotype /// 0071456 // cellular response to hypoxia // inferred from expression pattern /// 0071479 // cellular response to ionizing radiation // inferred from mutant phenotype /// 0071850 // mitotic cell cycle arrest // inferred from electronic annotation /// 0072332 // signal transduction by p53 class mediator resulting in induction of apoptosis // inferred from mutant phenotype /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from direct assay /// 0090343 // positive regulation of cell aging // inferred from electronic annotation /// 0090399 // replicative senescence // inferred from mutant phenotype /// 0090403 // oxidative stress-induced premature senescence // inferred from mutant phenotype /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from mutant phenotype /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype","0000785 // chromatin // not recorded /// 0000790 // nuclear chromatin // inferred from direct assay /// 0005626 // insoluble fraction // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005657 // replication fork // not recorded /// 0005657 // replication fork // inferred from electronic annotation /// 0005669 // transcription factor TFIID complex // inferred from direct assay /// 0005678 // chromatin assembly complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // not recorded /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from direct assay /// 0016604 // nuclear body // inferred from direct assay /// 0016605 // PML body // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0000739 // DNA strand annealing activity // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0001085 // RNA polymerase II transcription factor binding // inferred from physical interaction /// 0002020 // protease binding // inferred from physical interaction /// 0002039 // p53 binding // not recorded /// 0003677 // DNA binding // inferred from mutant phenotype /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005507 // copper ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // traceable author statement /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0035033 // histone deacetylase regulator activity // inferred from electronic annotation /// 0035035 // histone acetyltransferase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0051087 // chaperone binding // inferred from physical interaction /// 0051721 // protein phosphatase 2A binding // inferred from physical interaction /// 0070215 // MDM2 binding // inferred from electronic annotation","chr17:7577852-7590843 (-) // 80.92 // p13.1"]
["11715516_x_at",0.012218475,-0.049502373,-0.08725834,0.108893394,-0.00724411,0.00724411,0.4730879,0.1705959,-1.0554161,-0.077811904,1.0554161,"down","PSMD3",5709,"0000075 // cell cycle checkpoint // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042176 // regulation of protein catabolic process // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement","0000502 // proteasome complex // inferred from electronic annotation /// 0000502 // proteasome complex // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement","0030234 // enzyme regulator activity // inferred from electronic annotation","chr17:38136891-38154207 (+) // 86.51 // q21.1"]
["11743611_a_at",-0.07263374,-0.015281677,-0.030215263,0.015281677,0.0429821,0.017808914,0.19384271,0.028553488,-1.0458924,-0.06473438,1.0458924,"down","ZMYND11",10771,"0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0043124 // negative regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0046329 // negative regulation of JNK cascade // inferred from mutant phenotype /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:180423-300574 (+) // 98.87 // p15.3"]
["11725453_at",-0.035612106,0.18247938,-0.080201626,0.23579645,-0.17734194,0.035612106,0.9837671,0.9525582,-1.006351,-0.009133575,1.006351,"down","NAT8 /// NAT8B","51471 /// 9027","0001702 // gastrulation with mouth forming second // non-traceable author statement /// 0001702 // gastrulation with mouth forming second // inferred from mutant phenotype /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007369 // gastrulation // inferred from electronic annotation /// 0042493 // response to drug // traceable author statement","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0008080 // N-acetyltransferase activity // non-traceable author statement /// 0008080 // N-acetyltransferase activity // inferred from electronic annotation /// 0008080 // N-acetyltransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation","chr2:73867836-73869975 (-) // 88.81 // p13.1 /// chr2:73927518-73929634 (-) // 82.26 // p13.1"]
["11753427_a_at",0.044020653,0.0036849976,-0.0036845207,0.124752045,-0.22497225,-0.25437117,0.6555373,0.3396664,1.0964735,0.13287088,1.0964735,"up","RND3",390,"0006184 // GTP catabolic process // traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation /// 0005525 // GTP binding // traceable author statement","chr2:151326303-151343614 (-) // 99.78 // q23.3"]
["11729117_a_at",-0.00843811,0.043759346,-0.20484161,-0.03245449,0.06862354,0.00843811,0.72289664,0.4289059,-1.0507182,-0.07137578,1.0507182,"down","PRKCG",5582,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007611 // learning or memory // inferred from electronic annotation /// 0007635 // chemosensory behavior // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0031397 // negative regulation of protein ubiquitination // inferred from direct assay /// 0032425 // positive regulation of mismatch repair // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042177 // negative regulation of protein catabolic process // inferred from direct assay /// 0043278 // response to morphine // inferred from sequence or structural similarity /// 0043524 // negative regulation of neuron apoptotic process // inferred from sequence or structural similarity /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048265 // response to pain // inferred from sequence or structural similarity","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004697 // protein kinase C activity // inferred from electronic annotation /// 0004697 // protein kinase C activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:54385413-54410905 (+) // 96.98 // q13.42"]
["11746859_a_at",-0.227463,-0.022556543,0.11332846,-0.13837361,0.022556305,0.20005488,0.8433618,0.6246515,-1.0523707,-0.07364294,1.0523707,"down","LPA",4018,"0006508 // proteolysis // inferred from electronic annotation /// 0006629 // lipid metabolic process // traceable author statement /// 0006629 // lipid metabolic process // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // traceable author statement /// 0008015 // blood circulation // traceable author statement /// 0010951 // negative regulation of endopeptidase activity // traceable author statement /// 0042157 // lipoprotein metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0034358 // plasma lipoprotein particle // inferred from direct assay","0001968 // fibronectin binding // inferred from physical interaction /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from direct assay /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0004866 // endopeptidase inhibitor activity // traceable author statement /// 0008201 // heparin binding // non-traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0034185 // apolipoprotein binding // inferred from physical interaction","chr6:160874226-161071528 (-) // 45.99 // q25.3"]
["11759480_s_at",0.03422165,-0.013288498,0.0005245209,-0.0005245209,0.104065895,-0.0038404465,0.7911966,0.53159696,-1.0182425,-0.026081158,1.0182425,"down","PTP4A2",8073,"0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004727 // prenylated protein tyrosine phosphatase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr1:32372023-32403955 (-) // 88.6 // p35.2"]
["11744799_a_at",0.29765844,-0.03139305,-0.069663525,0.17997885,0.03139305,-0.17612982,0.9038464,0.74722904,1.0379857,0.053786542,1.0379857,"up","XRCC4",7518,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0002328 // pro-B cell differentiation // inferred from electronic annotation /// 0006266 // DNA ligation // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006302 // double-strand break repair // inferred from direct assay /// 0006302 // double-strand break repair // traceable author statement /// 0006302 // double-strand break repair // inferred from electronic annotation /// 0006303 // double-strand break repair via nonhomologous end joining // inferred from direct assay /// 0006303 // double-strand break repair via nonhomologous end joining // inferred from mutant phenotype /// 0006303 // double-strand break repair via nonhomologous end joining // non-traceable author statement /// 0006303 // double-strand break repair via nonhomologous end joining // traceable author statement /// 0006303 // double-strand break repair via nonhomologous end joining // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0010165 // response to X-ray // inferred from direct assay /// 0010165 // response to X-ray // inferred from electronic annotation /// 0010212 // response to ionizing radiation // inferred from electronic annotation /// 0010332 // response to gamma radiation // inferred from electronic annotation /// 0016032 // viral reproduction // traceable author statement /// 0019047 // provirus integration // traceable author statement /// 0019059 // initiation of viral infection // traceable author statement /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0033151 // V(D)J recombination // inferred from electronic annotation /// 0033152 // immunoglobulin V(D)J recombination // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0045190 // isotype switching // inferred from electronic annotation /// 0048146 // positive regulation of fibroblast proliferation // inferred from electronic annotation /// 0050769 // positive regulation of neurogenesis // inferred from electronic annotation /// 0051103 // DNA ligation involved in DNA repair // inferred from direct assay /// 0051351 // positive regulation of ligase activity // inferred from direct assay /// 0071285 // cellular response to lithium ion // inferred from electronic annotation","0000793 // condensed chromosome // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // inferred from direct assay /// 0005958 // DNA-dependent protein kinase-DNA ligase 4 complex // inferred from direct assay /// 0005958 // DNA-dependent protein kinase-DNA ligase 4 complex // inferred from electronic annotation /// 0032807 // DNA ligase IV complex // inferred from direct assay /// 0070419 // nonhomologous end joining complex // inferred from direct assay","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0016874 // ligase activity // inferred from direct assay","chr5:82373375-82554491 (+) // 75.0 // q14.2"]
["11747307_a_at",0.26546288,-0.007869244,0.050854683,0.007869244,-0.554749,-0.16874409,0.4301432,0.13994132,1.2669481,0.34135744,1.2669481,"up","GDI1",2664,"0007165 // signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0030496 // midbody // inferred from direct assay","0005092 // GDP-dissociation inhibitor activity // traceable author statement /// 0005093 // Rab GDP-dissociation inhibitor activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chrX:153665499-153669651 (+) // 93.57 // q28"]
["11742421_s_at",0.028303862,-0.028303862,0.2653067,-0.46538782,-0.16191936,0.07891846,0.52297086,0.20906724,1.2068378,0.27123174,1.2068378,"up","GRM5",2915,"0000185 // activation of MAPKKK activity // inferred from electronic annotation /// 0002029 // desensitization of G-protein coupled receptor protein signaling pathway // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007206 // phospholipase C-activating G-protein coupled glutamate receptor signaling pathway // traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007612 // learning // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0040013 // negative regulation of locomotion // inferred from electronic annotation /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048170 // positive regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0043198 // dendritic shaft // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0008066 // glutamate receptor activity // traceable author statement /// 0031687 // A2A adenosine receptor binding // inferred from electronic annotation","chr11:88237743-88796816 (-) // 99.22 // q14.2"]
["11733478_at",-0.100477934,0.013718367,0.17282343,-0.20410347,-0.013718605,0.28087187,0.98802215,0.96445924,1.0053315,0.0076713203,1.0053315,"up","OLIG3",167826,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr6:137813340-137815619 (-) // 96.65 // q23.3"]
["11750876_a_at",0.21397495,-0.13349247,-0.018585682,0.14179134,0.018585205,-0.1680665,0.95505035,0.87306404,1.0162079,0.023195632,1.0162079,"up","SCFD1",23256,"0001666 // response to hypoxia // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // inferred from sequence or structural similarity /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // inferred from sequence or structural similarity /// 0006892 // post-Golgi vesicle-mediated transport // inferred from electronic annotation /// 0006904 // vesicle docking involved in exocytosis // inferred from electronic annotation /// 0009636 // response to toxin // inferred from expression pattern /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0060628 // regulation of ER to Golgi vesicle-mediated transport // inferred from sequence or structural similarity /// 0060628 // regulation of ER to Golgi vesicle-mediated transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005798 // Golgi-associated vesicle // inferred from sequence or structural similarity /// 0005798 // Golgi-associated vesicle // inferred from electronic annotation /// 0005801 // cis-Golgi network // inferred from direct assay /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0017119 // Golgi transport complex // inferred from sequence or structural similarity /// 0017119 // Golgi transport complex // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0019905 // syntaxin binding // inferred from sequence or structural similarity /// 0047485 // protein N-terminus binding // inferred from electronic annotation","chr14:31091524-31204898 (+) // 97.02 // q12"]
["11744837_a_at",0.08651161,0.22125053,0.09788656,-0.18976784,-0.13307428,-0.08651161,0.09574853,0.0066151824,1.2072023,0.27166748,1.2072023,"up","CDH13",1012,"0001938 // positive regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001954 // positive regulation of cell-matrix adhesion // inferred from mutant phenotype /// 0002040 // sprouting angiogenesis // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from direct assay /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007162 // negative regulation of cell adhesion // inferred from direct assay /// 0007266 // Rho protein signal transduction // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0016339 // calcium-dependent cell-cell adhesion // inferred from direct assay /// 0016601 // Rac protein signal transduction // inferred from mutant phenotype /// 0030032 // lamellipodium assembly // inferred from direct assay /// 0030100 // regulation of endocytosis // inferred from mutant phenotype /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0042058 // regulation of epidermal growth factor receptor signaling pathway // inferred from mutant phenotype /// 0043542 // endothelial cell migration // inferred from direct assay /// 0043616 // keratinocyte proliferation // inferred from direct assay /// 0045216 // cell-cell junction organization // traceable author statement /// 0045885 // positive regulation of survival gene product expression // inferred from mutant phenotype /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from mutant phenotype /// 0050850 // positive regulation of calcium-mediated signaling // inferred from direct assay /// 0050927 // positive regulation of positive chemotaxis // inferred from direct assay /// 0051668 // localization within membrane // inferred from mutant phenotype /// 0055096 // low-density lipoprotein particle mediated signaling // inferred from direct assay","0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005901 // caveola // inferred from direct assay /// 0016020 // membrane // inferred from mutant phenotype /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation /// 0043005 // neuron projection // inferred from direct assay","0005509 // calcium ion binding // inferred from electronic annotation /// 0030169 // low-density lipoprotein particle binding // inferred from direct assay /// 0045296 // cadherin binding // inferred from direct assay /// 0055100 // adiponectin binding // inferred from sequence or structural similarity /// 0071813 // lipoprotein particle binding // inferred from direct assay","chr16:82660574-83214683 (+) // 97.37 // q23.3"]
["11737824_a_at",-0.03294182,-0.07286453,0,0.05744362,0.18642998,0,0.3975188,0.11945322,-1.0841467,-0.116560034,1.0841467,"down","STX16",8675,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006891 // intra-Golgi vesicle-mediated transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0042147 // retrograde transport, endosome to Golgi // inferred from direct assay","0000139 // Golgi membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005792 // microsome // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031201 // SNARE complex // traceable author statement","0005484 // SNAP receptor activity // inferred from direct assay /// 0005484 // SNAP receptor activity // inferred from electronic annotation /// 0005484 // SNAP receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr20:57226327-57254582 (+) // 93.69 // q13.32"]
["11727400_a_at",0.17248249,0.13866138,0.015224934,-0.015224934,-0.0297513,-0.026266575,0.2590916,0.050758764,1.0962199,0.13253723,1.0962199,"up","GSTZ1",2954,"0006559 // L-phenylalanine catabolic process // inferred from electronic annotation /// 0006559 // L-phenylalanine catabolic process // traceable author statement /// 0006572 // tyrosine catabolic process // inferred from electronic annotation /// 0006749 // glutathione metabolic process // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0009072 // aromatic amino acid family metabolic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004364 // glutathione transferase activity // inferred from direct assay /// 0004364 // glutathione transferase activity // inferred from electronic annotation /// 0004364 // glutathione transferase activity // traceable author statement /// 0004602 // glutathione peroxidase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016034 // maleylacetoacetate isomerase activity // not recorded /// 0016034 // maleylacetoacetate isomerase activity // inferred from direct assay /// 0016034 // maleylacetoacetate isomerase activity // inferred from electronic annotation /// 0016034 // maleylacetoacetate isomerase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction","chr14:77787229-77797939 (+) // 90.39 // q24.3"]
["11715710_s_at",0.03751278,0.10046816,0.038736343,-0.17930031,-0.037513256,-0.21999168,0.1844553,0.02578514,1.152293,0.20450756,1.152293,"up","CTSC",1075,"0001913 // T cell mediated cytotoxicity // inferred from electronic annotation /// 0006508 // proteolysis // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation","0005764 // lysosome // traceable author statement /// 0005764 // lysosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation","0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from direct assay /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0031404 // chloride ion binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation /// 0043621 // protein self-association // inferred from electronic annotation","chr11:88026759-88070941 (-) // 95.96 // q14.2"]
["11720997_a_at",-0.22074199,-0.03183317,0.025555372,-0.024070263,0.0627625,0.024070501,0.6057979,0.28606611,-1.0692463,-0.0965942,1.0692463,"down","ADCY2",108,"0006112 // energy reserve metabolic process // traceable author statement /// 0006171 // cAMP biosynthetic process // inferred from sequence or structural similarity /// 0006171 // cAMP biosynthetic process // non-traceable author statement /// 0006171 // cAMP biosynthetic process // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // inferred from sequence or structural similarity /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway // traceable author statement /// 0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009190 // cyclic nucleotide biosynthetic process // inferred from electronic annotation /// 0034199 // activation of protein kinase A activity // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0071377 // cellular response to glucagon stimulus // traceable author statement","0005622 // intracellular // inferred from sequence or structural similarity /// 0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045121 // membrane raft // inferred from sequence or structural similarity","0000166 // nucleotide binding // inferred from electronic annotation /// 0004016 // adenylate cyclase activity // inferred from sequence or structural similarity /// 0004016 // adenylate cyclase activity // non-traceable author statement /// 0004016 // adenylate cyclase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008179 // adenylate cyclase binding // inferred from sequence or structural similarity /// 0008294 // calcium- and calmodulin-responsive adenylate cyclase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016849 // phosphorus-oxygen lyase activity // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from sequence or structural similarity","chr5:7396320-7830194 (+) // 87.29 // p15.31"]
["11730928_a_at",-0.1520896,-0.068971634,-0.026568413,0.13383579,0.1979723,0.026568413,0.20339057,0.0313231,-1.1502935,-0.20200197,1.1502935,"down","IKBKB",3551,"0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0007252 // I-kappaB phosphorylation // traceable author statement /// 0007252 // I-kappaB phosphorylation // inferred from electronic annotation /// 0008063 // Toll signaling pathway // traceable author statement /// 0009615 // response to virus // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0008385 // IkappaB kinase complex // traceable author statement /// 0009898 // internal side of plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0035631 // CD40 receptor complex // inferred from sequence or structural similarity /// 0045121 // membrane raft // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008384 // IkappaB kinase activity // traceable author statement /// 0008384 // IkappaB kinase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction","chr8:42128819-42189956 (+) // 92.16 // p11.21"]
["11759330_at",0.04850912,0.24540448,-0.32612324,-0.056469917,0.08163023,-0.04850912,0.995112,0.9872329,-1.0020493,-0.0029535284,1.0020493,"down","B3GAT2",135152,"0006486 // protein glycosylation // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0015018 // galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity // inferred from sequence or structural similarity /// 0015018 // galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:71566916-71666892 (-) // 99.0 // q13"]
["11753887_x_at",0.101742744,-0.037644386,-0.03208351,0.106508255,0.03208351,-0.0331192,0.8855401,0.707981,-1.0171171,-0.024485845,1.0171171,"down","TOMM5",401505,"0006626 // protein targeting to mitochondrion // inferred by curator /// 0006626 // protein targeting to mitochondrion // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005742 // mitochondrial outer membrane translocase complex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008565 // protein transporter activity // inferred by curator","chr9:37588894-37592529 (-) // 100.0 // p13.2"]
["11744608_a_at",0.04779625,0.014203072,-0.046658516,0.048654556,-0.014203072,-0.20114183,0.7648027,0.49014193,1.0429552,0.060677134,1.0429552,"up","PARP3",10039,"0006281 // DNA repair // traceable author statement /// 0006471 // protein ADP-ribosylation // inferred from electronic annotation /// 0006471 // protein ADP-ribosylation // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005814 // centriole // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0003824 // catalytic activity // traceable author statement /// 0003950 // NAD+ ADP-ribosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr3:51976315-51982877 (+) // 86.52 // p21.2"]
["11723073_at",-0.2046547,-0.35814047,-0.33190346,0.34505177,0.2046547,0.285841,0.036653224,0.0007650465,-1.4914843,-0.5767488,1.4914843,"down","BCL9L",283149,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from mutant phenotype /// 0022604 // regulation of cell morphogenesis // inferred from mutant phenotype /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from mutant phenotype /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003713 // transcription coactivator activity // non-traceable author statement /// 0008013 // beta-catenin binding // inferred from direct assay /// 0008013 // beta-catenin binding // inferred from electronic annotation","chr11:118729970-118781613 (-) // 98.06 // q23.3"]
["11732633_at",-0.0337348,0.0021338463,0.027205467,-0.0021338463,0.054941177,-0.02237606,0.8864185,0.7106041,-1.0080792,-0.011608948,1.0080792,"down","HOXA7",3204,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001525 // angiogenesis // inferred from expression pattern /// 0001953 // negative regulation of cell-matrix adhesion // inferred from direct assay /// 0002686 // negative regulation of leukocyte migration // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0045617 // negative regulation of keratinocyte differentiation // inferred from direct assay /// 0045656 // negative regulation of monocyte differentiation // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048704 // embryonic skeletal system morphogenesis // inferred from electronic annotation /// 0048863 // stem cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr7:27193339-27196298 (-) // 95.94 // p15.2"]
["11717008_a_at",0.28730965,-0.009527206,0.009527206,0.1388855,-0.035176277,-0.12260628,0.7403516,0.45300916,1.0733116,0.10206893,1.0733116,"up","BNIP3L",665,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0008634 // negative regulation of survival gene product expression // inferred from direct assay /// 0035694 // mitochondrial protein catabolic process // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005740 // mitochondrial envelope // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from mutant phenotype /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031224 // intrinsic to membrane // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0005521 // lamin binding // inferred from direct assay /// 0005521 // lamin binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay","chr8:26240413-26270641 (+) // 97.27 // p21.2"]
["11716525_a_at",0.042959213,-0.0061883926,-0.049290657,0.01899147,-0.01252079,0.0061883926,0.9172042,0.78063095,-1.0058345,-0.008392886,1.0058345,"down","LOC100130872 /// SPON2","100130872 /// 10417","0007155 // cell adhesion // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation","0005102 // receptor binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:1160719-1166661 (-) // 95.6 // p16.3"]
["11736929_at",0.21969414,-0.034389496,0.12412906,0.00463295,-0.0046331882,-0.008368492,0.54359406,0.22653668,1.076191,0.105934076,1.076191,"up","G6PC",2538,"0005975 // carbohydrate metabolic process // traceable author statement /// 0005977 // glycogen metabolic process // traceable author statement /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0005980 // glycogen catabolic process // inferred from electronic annotation /// 0006094 // gluconeogenesis // inferred from electronic annotation /// 0006094 // gluconeogenesis // inferred from mutant phenotype /// 0006641 // triglyceride metabolic process // inferred from electronic annotation /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0015760 // glucose-6-phosphate transport // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from mutant phenotype /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0042632 // cholesterol homeostasis // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046415 // urate metabolic process // inferred from electronic annotation /// 0051156 // glucose 6-phosphate metabolic process // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004346 // glucose-6-phosphatase activity // inferred from direct assay /// 0004346 // glucose-6-phosphatase activity // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042301 // phosphate ion binding // inferred from mutant phenotype","chr17:41052814-41065386 (+) // 82.52 // q21.31"]
["11741009_a_at",0.11108065,-0.11148453,-0.010334015,0.1448741,-0.26321745,0.010334015,0.9357476,0.8235501,1.0227289,0.0324238,1.0227289,"up","FGF12",2257,"0007165 // signal transduction // traceable author statement /// 0007254 // JNK cascade // inferred from physical interaction /// 0007267 // cell-cell signaling // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0007507 // heart development // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from direct assay","0005615 // extracellular space // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement","0005104 // fibroblast growth factor receptor binding // inferred from direct assay /// 0008083 // growth factor activity // inferred from electronic annotation /// 0008083 // growth factor activity // traceable author statement /// 0008201 // heparin binding // inferred from direct assay","chr3:191859683-192445388 (-) // 96.73 // q28"]
["11745631_a_at",0.8060212,-0.010053158,0.010053158,0.6639271,-0.4316702,-0.1446824,0.8318816,0.6023979,1.1805689,0.23948228,1.1805689,"up","NHS",4810,"0002088 // lens development in camera-type eye // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","","chrX:17393356-17750620 (+) // 96.57 // p22.13"]
["11756972_x_at",0.05325222,0.014633179,-0.00016403198,0.00016403198,-0.0602026,-0.11349106,0.3496491,0.09224875,1.0573236,0.080416955,1.0573236,"up","YBX1",4904,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // non-traceable author statement /// 0051154 // negative regulation of striated muscle cell differentiation // inferred from electronic annotation /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0070934 // CRD-mediated mRNA stabilization // inferred from mutant phenotype","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005689 // U12-type spliceosomal complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0010494 // cytoplasmic stress granule // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070937 // CRD-mediated mRNA stability complex // inferred from direct assay /// 0071204 // histone pre-mRNA 3'end processing complex // inferred from sequence or structural similarity /// 0071204 // histone pre-mRNA 3'end processing complex // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // traceable author statement /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:43148657-43168013 (+) // 96.87 // p34.2"]
["11743909_at",-0.04967594,-0.1390171,-0.08246422,0.2401638,0.110007286,0.04967594,0.17288506,0.02256878,-1.1676987,-0.22366811,1.1676987,"down","ALG14",199857,"0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:95447797-95538507 (-) // 85.06 // p21.3"]
["11761998_a_at",-0.013597488,-0.117259026,0.013597488,-0.21849537,0.117964745,0.34804726,0.77959037,0.51226777,-1.0879346,-0.12159185,1.0879346,"down","HDAC4",9759,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001501 // skeletal system development // inferred from electronic annotation /// 0002076 // osteoblast development // inferred from electronic annotation /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0010832 // negative regulation of myotube differentiation // inferred from mutant phenotype /// 0010882 // regulation of cardiac muscle contraction by calcium ion signaling // inferred from electronic annotation /// 0014894 // response to denervation involved in regulation of muscle adaptation // inferred from sequence or structural similarity /// 0014894 // response to denervation involved in regulation of muscle adaptation // inferred from electronic annotation /// 0014898 // cardiac muscle hypertrophy in response to stress // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016575 // histone deacetylation // inferred from direct assay /// 0016575 // histone deacetylation // inferred from mutant phenotype /// 0016575 // histone deacetylation // inferred from electronic annotation /// 0030183 // B cell differentiation // traceable author statement /// 0033235 // positive regulation of protein sumoylation // inferred from direct assay /// 0034983 // peptidyl-lysine deacetylation // inferred from direct assay /// 0042113 // B cell activation // traceable author statement /// 0043393 // regulation of protein binding // inferred from mutant phenotype /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0045668 // negative regulation of osteoblast differentiation // inferred from electronic annotation /// 0045820 // negative regulation of glycolysis // inferred from sequence or structural similarity /// 0045820 // negative regulation of glycolysis // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0070555 // response to interleukin-1 // inferred from mutant phenotype /// 0070932 // histone H3 deacetylation // inferred from direct assay /// 0070933 // histone H4 deacetylation // inferred from direct assay","0000118 // histone deacetylase complex // inferred from direct assay /// 0000118 // histone deacetylase complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from direct assay /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0042641 // actomyosin // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0004407 // histone deacetylase activity // inferred from direct assay /// 0004407 // histone deacetylase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0030955 // potassium ion binding // inferred from direct assay /// 0031078 // histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0032041 // NAD-dependent histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0032129 // histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0033558 // protein deacetylase activity // inferred from direct assay /// 0033558 // protein deacetylase activity // inferred from electronic annotation /// 0033613 // activating transcription factor binding // inferred from physical interaction /// 0034739 // histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046969 // NAD-dependent histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0046970 // NAD-dependent histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation /// 0070491 // repressing transcription factor binding // inferred from physical interaction","chr2:240016194-240112752 (-) // 93.12 // q37.3"]
["11747506_a_at",-0.07574749,-0.03479767,-0.019602776,0.09247112,0.019602776,0.049648285,0.17314811,0.022647258,-1.0697621,-0.09729001,1.0697621,"down","NAP1L4",4676,"0006334 // nucleosome assembly // inferred from electronic annotation /// 0006334 // nucleosome assembly // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005678 // chromatin assembly complex // traceable author statement /// 0005737 // cytoplasm // traceable author statement","0051082 // unfolded protein binding // traceable author statement","chr11:2966341-3013530 (-) // 98.83 // p15.4"]
["11728878_s_at",-0.10790348,-0.17384195,-0.020580292,0.4977746,0.3337512,0.020580292,0.27840713,0.05877014,-1.3056884,-0.38481063,1.3056884,"down","ARID1B",57492,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0048096 // chromatin-mediated maintenance of transcription // non-traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016514 // SWI/SNF complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr6:157099085-157530396 (+) // 91.62 // q25.3"]
["11743375_s_at",0.03382206,-0.06780434,-0.03382206,0.07278252,0.08082247,-0.045972347,0.63149136,0.31311846,-1.0413673,-0.058479,1.0413673,"down","FRYL",285527,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","","","chr4:48499379-48782329 (-) // 99.29 // p11"]
["11734920_s_at",0.20675898,-0.12950325,0.040897846,0.028214455,-0.10181999,-0.028214455,0.7841716,0.52011913,1.0521384,0.07332455,1.0521384,"up","PCYOX1L",78991,"0030328 // prenylcysteine catabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016670 // oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor // inferred from electronic annotation","chr5:148737569-148749221 (+) // 98.13 // q32"]
["11747152_a_at",-0.10375786,0.053474426,0.0105137825,0.060685635,-0.44906902,-0.0105137825,0.77875674,0.5110697,1.0865158,0.119709134,1.0865158,"up","PHLDB2",90102,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0004629 // phospholipase C activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008081 // phosphoric diester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr3:111578596-111604641 (+) // 94.65 // q13.2"]
["11716932_a_at",0.12724209,0.056416035,0.045413017,-0.045413017,-0.18074274,-0.17711449,0.14037578,0.014817679,1.1573141,0.21078043,1.1573141,"up","CCDC80",151887,"0010811 // positive regulation of cell-substrate adhesion // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005614 // interstitial matrix // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0001968 // fibronectin binding // inferred from electronic annotation /// 0005539 // glycosaminoglycan binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from electronic annotation","chr3:112323006-112360270 (-) // 86.91 // q13.2"]
["11723116_a_at",-0.039088726,-0.06074381,0.052947044,0.008162975,0.042242527,-0.008162975,0.75565225,0.47675163,-1.0208064,-0.029709324,1.0208064,"down","RAD51L3-RFFL /// RFFL","100529207 /// 117584","0006886 // intracellular protein transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:33335964-33416294 (-) // 90.59 // q12"]
["11758237_s_at",0.24306965,0.055994987,0.12464905,-0.2057581,-0.055994987,-0.08762169,0.17185394,0.02231909,1.195568,0.25769615,1.195568,"up","EIF2C4",192670,"0006402 // mRNA catabolic process // inferred from direct assay /// 0006413 // translational initiation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0007219 // Notch signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031047 // gene silencing by RNA // inferred from electronic annotation /// 0035278 // negative regulation of translation involved in gene silencing by miRNA // inferred from direct assay","0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0035068 // micro-ribonucleoprotein complex // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:36319722-36320529 (+) // 89.57 // p34.3"]
["11745813_a_at",0.09883499,0.10000467,0.15317869,-0.09883499,-0.1937356,-0.13230133,0.048107382,0.0014355361,1.1966187,0.2589635,1.1966187,"up","DBNDD1",79007,"","0005737 // cytoplasm // inferred from electronic annotation","","chr16:90071280-90086539 (-) // 94.95 // q24.3"]
["11756312_a_at",-0.040109396,0.28741956,-0.16830325,-0.048582315,0.040109396,0.21043944,0.9276746,0.8051515,-1.028817,-0.040986467,1.028817,"down","SERPINF1",5176,"0001822 // kidney development // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0007614 // short-term memory // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0010951 // negative regulation of endopeptidase activity // not recorded /// 0016525 // negative regulation of angiogenesis // inferred from direct assay /// 0016525 // negative regulation of angiogenesis // inferred from electronic annotation /// 0030162 // regulation of proteolysis // not recorded /// 0032526 // response to retinoic acid // inferred from electronic annotation /// 0050728 // negative regulation of inflammatory response // inferred from electronic annotation /// 0050769 // positive regulation of neurogenesis // inferred from direct assay /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0060770 // negative regulation of epithelial cell proliferation involved in prostate gland development // inferred from electronic annotation","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation","0004867 // serine-type endopeptidase inhibitor activity // not recorded /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // traceable author statement","chr17:1665369-1680827 (+) // 93.97 // p13.3"]
["11757272_a_at",-0.028336525,0.16697884,0.16004848,-0.0131931305,-0.06272411,0.0131931305,0.44538602,0.1499588,1.0870901,0.12047156,1.0870901,"up","JTB",10899,"0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from mutant phenotype /// 0007067 // mitosis // inferred from electronic annotation /// 0033205 // cell cycle cytokinesis // inferred from mutant phenotype /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay","0019901 // protein kinase binding // inferred from direct assay","chr1:153946986-153948382 (-) // 83.94 // q21.3"]
["11729753_at",0.013458729,-0.013458967,-0.19381547,0.071947336,0.11572695,-0.15916872,0.788701,0.52765286,-1.0527093,-0.074107155,1.0527093,"down","ULK2",9706,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0010506 // regulation of autophagy // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0042594 // response to starvation // inferred from sequence or structural similarity /// 0046777 // protein autophosphorylation // inferred from direct assay","0016020 // membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0034045 // pre-autophagosomal structure membrane // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr17:19674142-19771239 (-) // 85.81 // p11.2"]
["11737323_at",0.069704294,0.0007624626,-0.37015486,-0.0007624626,0.0905664,-0.2963848,0.9541577,0.8712689,-1.0217454,-0.031035809,1.0217454,"down","LAMC2",3918,"0007155 // cell adhesion // inferred from electronic annotation /// 0008544 // epidermis development // traceable author statement /// 0031581 // hemidesmosome assembly // traceable author statement /// 0034329 // cell junction assembly // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005607 // laminin-2 complex // inferred from electronic annotation /// 0005610 // laminin-5 complex // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0008201 // heparin binding // inferred from electronic annotation","chr1:183155173-183210406 (+) // 88.09 // q25.3"]
["11738705_at",-0.16449022,0.3056531,0.22020626,-0.26187897,-0.06711435,0.06711435,0.61658156,0.29674435,1.1548852,0.20774941,1.1548852,"up","OR4K2",390431,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr14:20344390-20345468 (+) // 99.72 // q11.2"]
["11733177_a_at",0.18879223,0,-0.080723286,-0.047802925,0.08072376,0,0.9216082,0.7905666,1.0175145,0.025049306,1.0175145,"up","ZNF507",22847,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:32836513-32878573 (+) // 93.4 // q13.11"]
["11729603_a_at",0.00073337555,0.07536411,0.05283165,-0.1670103,-0.09285545,-0.00073337555,0.3038422,0.0702041,1.0941744,0.12984268,1.0941744,"up","MCM7",4176,"0000075 // cell cycle checkpoint // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0006268 // DNA unwinding involved in replication // inferred from electronic annotation /// 0006270 // DNA-dependent DNA replication initiation // inferred from electronic annotation /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // inferred from electronic annotation /// 0042325 // regulation of phosphorylation // inferred from mutant phenotype","0000785 // chromatin // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0042555 // MCM complex // inferred from direct assay /// 0042555 // MCM complex // inferred from mutant phenotype","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003678 // DNA helicase activity // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0004003 // ATP-dependent DNA helicase activity // inferred from direct assay /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr7:99543354-99699427 (-) // 97.65 // q22.1"]
["11721036_at",0.050433636,-0.04211092,-0.13063669,0.19325829,-0.0260396,0.0260396,0.600286,0.28021854,-1.0756366,-0.105190784,1.0756366,"down","SUFU",51684,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001501 // skeletal system development // traceable author statement /// 0001843 // neural tube closure // inferred from electronic annotation /// 0001947 // heart looping // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006508 // proteolysis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0021513 // spinal cord dorsal/ventral patterning // inferred from electronic annotation /// 0042992 // negative regulation of transcription factor import into nucleus // traceable author statement /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // traceable author statement /// 0043588 // skin development // inferred from electronic annotation /// 0045668 // negative regulation of osteoblast differentiation // traceable author statement /// 0045879 // negative regulation of smoothened signaling pathway // traceable author statement /// 0045879 // negative regulation of smoothened signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation","0003714 // transcription corepressor activity // traceable author statement /// 0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from direct assay /// 0019901 // protein kinase binding // inferred from physical interaction","chr10:104263699-104393283 (+) // 96.23 // q24.32"]
["11753522_a_at",-0.189085,-0.025389671,0.2923813,-0.011788368,0.011787891,0.06639099,0.99257624,0.9799014,1.0026643,0.0038387007,1.0026643,"up","NKX3-1",4824,"0001655 // urogenital system development // inferred from electronic annotation /// 0001656 // metanephros development // inferred from electronic annotation /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0007275 // multicellular organismal development // traceable author statement /// 0007431 // salivary gland development // inferred from sequence or structural similarity /// 0007431 // salivary gland development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0008633 // activation of pro-apoptotic gene products // inferred from direct assay /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0010628 // positive regulation of gene expression // inferred from expression pattern /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0010629 // negative regulation of gene expression // inferred from expression pattern /// 0010942 // positive regulation of cell death // inferred from direct assay /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // inferred from direct assay /// 0030521 // androgen receptor signaling pathway // inferred from direct assay /// 0030850 // prostate gland development // inferred from electronic annotation /// 0033574 // response to testosterone stimulus // inferred from sequence or structural similarity /// 0033574 // response to testosterone stimulus // inferred from electronic annotation /// 0035690 // cellular response to drug // inferred from expression pattern /// 0035907 // dorsal aorta development // inferred from electronic annotation /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043491 // protein kinase B signaling cascade // inferred from mutant phenotype /// 0043491 // protein kinase B signaling cascade // inferred from electronic annotation /// 0043569 // negative regulation of insulin-like growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0043569 // negative regulation of insulin-like growth factor receptor signaling pathway // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045930 // negative regulation of mitotic cell cycle // inferred from direct assay /// 0045931 // positive regulation of mitotic cell cycle // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048754 // branching morphogenesis of a tube // inferred from sequence or structural similarity /// 0048754 // branching morphogenesis of a tube // inferred from electronic annotation /// 0050680 // negative regulation of epithelial cell proliferation // inferred from sequence or structural similarity /// 0050680 // negative regulation of epithelial cell proliferation // inferred from electronic annotation /// 0051781 // positive regulation of cell division // inferred from mutant phenotype /// 0060037 // pharyngeal system development // inferred from electronic annotation /// 0060442 // branching involved in prostate gland morphogenesis // inferred from sequence or structural similarity /// 0060442 // branching involved in prostate gland morphogenesis // inferred from electronic annotation /// 0060664 // epithelial cell proliferation involved in salivary gland morphogenesis // inferred from sequence or structural similarity /// 0060664 // epithelial cell proliferation involved in salivary gland morphogenesis // inferred from electronic annotation /// 0060770 // negative regulation of epithelial cell proliferation involved in prostate gland development // inferred from sequence or structural similarity /// 0060770 // negative regulation of epithelial cell proliferation involved in prostate gland development // inferred from electronic annotation /// 0071347 // cellular response to interleukin-1 // inferred from expression pattern /// 0071356 // cellular response to tumor necrosis factor // inferred from expression pattern /// 0071383 // cellular response to steroid hormone stimulus // inferred from direct assay /// 0071456 // cellular response to hypoxia // inferred from direct assay /// 0071850 // mitotic cell cycle arrest // inferred from direct assay /// 0071899 // negative regulation of estrogen receptor binding // inferred from direct assay /// 2000500 // positive regulation of induction of apoptosis in response to chemical stimulus // inferred from direct assay /// 2000836 // positive regulation of androgen secretion // inferred from direct assay /// 2001022 // positive regulation of response to DNA damage stimulus // inferred from direct assay","0005622 // intracellular // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0000976 // transcription regulatory region sequence-specific DNA binding // inferred from direct assay /// 0000983 // RNA polymerase II core promoter sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0000988 // protein binding transcription factor activity // inferred from direct assay /// 0001047 // core promoter binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0004882 // androgen receptor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008656 // cysteine-type endopeptidase activator activity involved in apoptotic process // inferred from direct assay /// 0030284 // estrogen receptor activity // inferred from direct assay /// 0030295 // protein kinase activator activity // inferred from direct assay /// 0030331 // estrogen receptor binding // inferred from direct assay /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0043621 // protein self-association // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0097162 // MADS box domain binding // inferred from electronic annotation","chr8:23538516-23540402 (-) // 97.93 // p21.2"]
["11756834_a_at",-0.25782013,-0.08159447,0.26090622,0.08159447,-0.12884045,0.15938187,0.8976324,0.73479056,-1.0450327,-0.06354814,1.0450327,"down","PRKAG3",53632,"0005978 // glycogen biosynthetic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0007243 // intracellular protein kinase cascade // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0015758 // glucose transport // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0046320 // regulation of fatty acid oxidation // traceable author statement","0005829 // cytosol // traceable author statement /// 0031588 // AMP-activated protein kinase complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004679 // AMP-activated protein kinase activity // traceable author statement /// 0004679 // AMP-activated protein kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from direct assay","chr2:219691357-219696526 (-) // 91.67 // q35"]
["11738444_at",-0.10413551,0.14202166,-0.060796738,-0.35009384,0.060796738,0.12023258,0.91849256,0.7839967,1.0343454,0.04871801,1.0343454,"up","OR51G2",81282,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:4935890-4936930 (-) // 100.0 // p15.4"]
["11718046_a_at",-0.061647415,-0.040533543,0.0840683,-0.27298975,0.040533543,0.4527583,0.8953119,0.73040557,-1.056631,-0.079471596,1.056631,"down","ITPK1",3705,"0007165 // signal transduction // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032957 // inositol trisphosphate metabolic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003824 // catalytic activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047325 // inositol tetrakisphosphate 1-kinase activity // inferred from electronic annotation /// 0052725 // inositol-1,3,4-trisphosphate 6-kinase activity // inferred from electronic annotation /// 0052726 // inositol-1,3,4-trisphosphate 5-kinase activity // inferred from electronic annotation","chr14:93403258-93582263 (-) // 91.79 // q32.12"]
["11745878_x_at",-0.016617775,-0.12770748,-0.03007698,0.016617775,0.061855316,0.04383087,0.27462623,0.057275873,-1.0709581,-0.098902084,1.0709581,"down","NFKBIA",4792,"0000060 // protein import into nucleus, translocation // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006916 // anti-apoptosis // traceable author statement /// 0007253 // cytoplasmic sequestering of NF-kappaB // inferred from mutant phenotype /// 0007253 // cytoplasmic sequestering of NF-kappaB // inferred from electronic annotation /// 0008063 // Toll signaling pathway // traceable author statement /// 0010745 // negative regulation of macrophage derived foam cell differentiation // inferred from mutant phenotype /// 0010875 // positive regulation of cholesterol efflux // inferred from mutant phenotype /// 0010888 // negative regulation of lipid storage // inferred from mutant phenotype /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0032270 // positive regulation of cellular protein metabolic process // inferred from mutant phenotype /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0032495 // response to muramyl dipeptide // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // inferred from electronic annotation /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042345 // regulation of NF-kappaB import into nucleus // non-traceable author statement /// 0042994 // cytoplasmic sequestering of transcription factor // inferred from direct assay /// 0042994 // cytoplasmic sequestering of transcription factor // traceable author statement /// 0043330 // response to exogenous dsRNA // inferred from electronic annotation /// 0043392 // negative regulation of DNA binding // non-traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045638 // negative regulation of myeloid cell differentiation // inferred from electronic annotation /// 0045746 // negative regulation of Notch signaling pathway // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0070417 // cellular response to cold // non-traceable author statement /// 0070427 // nucleotide-binding oligomerization domain containing 1 signaling pathway // inferred from electronic annotation /// 0070431 // nucleotide-binding oligomerization domain containing 2 signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0033256 // I-kappaB/NF-kappaB complex // traceable author statement /// 0043234 // protein complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // traceable author statement /// 0008139 // nuclear localization sequence binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0031072 // heat shock protein binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0051059 // NF-kappaB binding // inferred from direct assay /// 0051059 // NF-kappaB binding // inferred from physical interaction","chr14:35870718-35873955 (-) // 99.74 // q13.2"]
["11753826_x_at",0.027756214,-0.004887581,0.004887581,-0.06658745,-0.10708475,0.06810951,0.74189854,0.45545766,1.0312825,0.044439647,1.0312825,"up","CTLA4",1493,"0006955 // immune response // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from mutant phenotype /// 0030889 // negative regulation of B cell proliferation // inferred from mutant phenotype /// 0031295 // T cell costimulation // traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0045590 // negative regulation of regulatory T cell differentiation // inferred from direct assay /// 0050853 // B cell receptor signaling pathway // inferred from mutant phenotype","0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045334 // clathrin-coated endocytic vesicle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr2:204732665-204737535 (+) // 99.64 // q33.2"]
["11748873_x_at",-0.14935732,0.28942966,-0.1852293,0.20363998,-0.054165363,0.054165363,0.8574223,0.6510338,-1.0591687,-0.08293239,1.0591687,"down","CD33",945,"0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr19:51728345-51739221 (+) // 87.92 // q13.41"]
["11716019_at",0.3142376,0.0661602,0.19978857,-0.17902374,-0.0661602,-0.145504,0.14094254,0.01496588,1.2514709,0.32362476,1.2514709,"up","RAB31",11031,"0006184 // GTP catabolic process // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0048193 // Golgi vesicle transport // inferred from electronic annotation","0005769 // early endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation","chr18:9707962-9862548 (+) // 95.84 // p11.22"]
["11715385_s_at",-0.043888092,0.011366844,-0.011366844,-0.06876278,0.050445557,0.03663063,0.8511914,0.6390079,-1.0144753,-0.020733804,1.0144753,"down","C4orf46 /// TOMM7","201725 /// 54543","0006626 // protein targeting to mitochondrion // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005742 // mitochondrial outer membrane translocase complex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008320 // protein transmembrane transporter activity // traceable author statement /// 0015450 // P-P-bond-hydrolysis-driven protein transmembrane transporter activity // inferred from electronic annotation","chr7:22852256-22862466 (-) // 75.69 // p15.3"]
["11720315_x_at",0.21517181,0.019599915,-0.019599915,0.10512447,-0.021641731,-0.025346756,0.8120534,0.56840456,1.0369493,0.052345324,1.0369493,"up","ATP6V0B",533,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // traceable author statement /// 0015992 // proton transport // inferred from electronic annotation /// 0033572 // transferrin transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005768 // endosome // inferred from electronic annotation /// 0005773 // vacuole // inferred from electronic annotation /// 0005774 // vacuolar membrane // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0033177 // proton-transporting two-sector ATPase complex, proton-transporting domain // inferred from electronic annotation /// 0033179 // proton-transporting V-type ATPase, V0 domain // inferred from electronic annotation","0005215 // transporter activity // traceable author statement /// 0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation","chr1:44440068-44443967 (+) // 92.69 // p34.1"]
["11728330_a_at",-0.0354805,-0.018506527,-0.04798603,0.28469753,0.15503216,0.018506527,0.3101128,0.07316013,-1.1381861,-0.18673646,1.1381861,"down","MTERF",7978,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006353 // transcription termination, DNA-dependent // inferred from direct assay /// 0006353 // transcription termination, DNA-dependent // inferred from electronic annotation /// 0006353 // transcription termination, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006390 // transcription from mitochondrial promoter // traceable author statement /// 0006393 // termination of mitochondrial transcription // inferred from direct assay /// 0006393 // termination of mitochondrial transcription // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0032392 // DNA geometric change // inferred from direct assay","0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0042645 // mitochondrial nucleoid // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from direct assay /// 0003690 // double-stranded DNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr7:91502020-91510034 (-) // 77.63 // q21.2"]
["11756513_a_at",-0.0568738,0.05687332,0.16858912,-0.12465,-0.09315395,0.12865639,0.7389379,0.45075232,1.0613586,0.08591214,1.0613586,"up","SFXN5",94097,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","0008324 // cation transmembrane transporter activity // inferred from electronic annotation","chr2:73171868-73298854 (-) // 96.34 // p13.2"]
["11761169_at",-0.17619324,0.21697378,-0.008984566,-0.15592098,0.008984566,0.29663706,0.9396176,0.83287936,-1.0276163,-0.039301626,1.0276163,"down","ACAN",176,"0001501 // skeletal system development // non-traceable author statement /// 0001502 // cartilage condensation // inferred from electronic annotation /// 0001503 // ossification // inferred from electronic annotation /// 0002063 // chondrocyte development // inferred from electronic annotation /// 0006508 // proteolysis // non-traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0009314 // response to radiation // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009629 // response to gravity // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0010259 // multicellular organismal aging // inferred from electronic annotation /// 0010447 // response to acidity // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0021510 // spinal cord development // inferred from electronic annotation /// 0030166 // proteoglycan biosynthetic process // inferred from electronic annotation /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0060591 // chondroblast differentiation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0072534 // perineuronal net // inferred from electronic annotation","0005201 // extracellular matrix structural constituent // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005540 // hyaluronic acid binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:89346673-89394754 (+) // 82.25 // q26.1"]
["11742170_s_at",-0.4799428,-0.050689697,0.124899864,-0.338387,0.050689697,0.17518806,0.8821914,0.7012565,-1.0700966,-0.09774105,1.0700966,"down","CDRT15 /// CDRT15P1","146822 /// 94158","","","","chr17:13927777-13928850 (+) // 96.7 // p12 /// chr17:14139130-14140203 (-) // 97.45 // p12"]
["11718686_x_at",0.2065773,0.018854141,-0.031391144,0.037397385,-0.018854141,-0.076660156,0.66452503,0.3502855,1.0599912,0.08405234,1.0599912,"up","TXNRD2",10587,"0000305 // response to oxygen radical // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0010269 // response to selenium ion // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0004791 // thioredoxin-disulfide reductase activity // inferred from sequence or structural similarity /// 0004791 // thioredoxin-disulfide reductase activity // inferred from electronic annotation /// 0004791 // thioredoxin-disulfide reductase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016668 // oxidoreductase activity, acting on a sulfur group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation /// 0050661 // NADP binding // inferred from electronic annotation","chr22:19863044-19929515 (-) // 95.37 // q11.21"]
["11745967_x_at",-0.23475933,-0.44196987,-0.31302738,0.5863638,0.53716373,0.23475933,0.069932416,0.00336106,-1.720325,-0.7826811,1.720325,"down","BCLAF1",9774,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043620 // regulation of DNA-dependent transcription in response to stress // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // traceable author statement /// 2000144 // positive regulation of transcription initiation, DNA-dependent // inferred from mutant phenotype /// 2001022 // positive regulation of response to DNA damage stimulus // inferred from mutant phenotype /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:136580816-136610933 (-) // 99.86 // q23.3"]
["11737810_at",-0.28864956,0.020801544,-0.11341858,0.016716957,-0.016716957,0.1526165,0.4595439,0.1605907,-1.1312839,-0.17796099,1.1312839,"down","RPS20",6224,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from electronic annotation /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // inferred from direct assay /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation","chr8:56985367-56987065 (-) // 79.01 // q12.1"]
["11734643_a_at",0.083823204,-0.08655882,-0.0736413,-0.14892578,0.27298212,0.0736413,0.79122126,0.53164214,-1.0653727,-0.09135822,1.0653727,"down","PLA2G4F",255189,"0001516 // prostaglandin biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009395 // phospholipid catabolic process // inferred from electronic annotation /// 0015908 // fatty acid transport // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0050482 // arachidonic acid secretion // inferred from electronic annotation /// 0071236 // cellular response to antibiotic // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031982 // vesicle // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation","0004620 // phospholipase activity // inferred from electronic annotation /// 0004622 // lysophospholipase activity // inferred from electronic annotation /// 0004623 // phospholipase A2 activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047498 // calcium-dependent phospholipase A2 activity // inferred from electronic annotation","chr15:42433398-42448821 (-) // 97.87 // q15.1"]
["11742575_at",-0.4057393,0.055125713,0.0025815964,-0.22301435,-0.0025815964,0.15544558,0.8506756,0.63825023,-1.0663102,-0.092627145,1.0663102,"down","OR5B3",441608,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:58169937-58170882 (-) // 100.0 // q12.1"]
["11761013_at",-0.33262205,-0.2568388,-0.14134645,0.18626785,0.14134645,0.16215754,0.05624008,0.0020517183,-1.3257968,-0.40685973,1.3257968,"down","PCNA",5111,"0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000083 // regulation of transcription involved in G1/S phase of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000278 // mitotic cell cycle // traceable author statement /// 0000722 // telomere maintenance via recombination // traceable author statement /// 0000723 // telomere maintenance // traceable author statement /// 0006260 // DNA replication // non-traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement /// 0006275 // regulation of DNA replication // inferred from electronic annotation /// 0006281 // DNA repair // non-traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006284 // base-excision repair // traceable author statement /// 0006287 // base-excision repair, gap-filling // inferred from electronic annotation /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006297 // nucleotide-excision repair, DNA gap filling // traceable author statement /// 0006298 // mismatch repair // inferred from direct assay /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0019985 // translesion synthesis // inferred from direct assay /// 0032077 // positive regulation of deoxyribonuclease activity // inferred from direct assay /// 0032201 // telomere maintenance via semi-conservative replication // traceable author statement /// 0033993 // response to lipid // inferred from electronic annotation /// 0046686 // response to cadmium ion // inferred from electronic annotation /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement","0000307 // cyclin-dependent protein kinase holoenzyme complex // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005652 // nuclear lamina // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005657 // replication fork // inferred from electronic annotation /// 0005663 // DNA replication factor C complex // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0043596 // nuclear replication fork // inferred from direct assay /// 0043626 // PCNA complex // inferred from electronic annotation /// 0070557 // PCNA-p21 complex // inferred from direct assay","0000701 // purine-specific mismatch base pair DNA N-glycosylase activity // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030337 // DNA polymerase processivity factor activity // inferred from electronic annotation /// 0030971 // receptor tyrosine kinase binding // inferred from physical interaction /// 0032139 // dinucleotide insertion or deletion binding // inferred from direct assay /// 0032405 // MutLalpha complex binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction","chr20:5098598-5100604 (-) // 80.58 // p13"]
["11730343_a_at",0.3143468,0.018986225,-0.018986225,0.111973286,-0.0992074,-0.101122856,0.66405195,0.34975117,1.0975103,0.13423453,1.0975103,"up","TSSK6",83983,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0035092 // sperm chromatin condensation // inferred from sequence or structural similarity /// 0035092 // sperm chromatin condensation // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:19623225-19627004 (-) // 90.78 // p13.11"]
["11747422_a_at",0.13490105,-0.0794363,-0.09716225,0.32483864,-0.028553963,0.028553963,0.708575,0.4086776,-1.0883772,-0.12217869,1.0883772,"down","WBSCR22",114049,"0008152 // metabolic process // inferred from electronic annotation /// 0032259 // methylation // non-traceable author statement /// 0032259 // methylation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0008168 // methyltransferase activity // non-traceable author statement /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr7:73097897-73112323 (+) // 93.18 // q11.23"]
["11739761_a_at",-0.18221712,-0.01488924,0.029157877,-0.025471687,0.01488924,0.28028512,0.59545165,0.2752133,-1.1064081,-0.14588365,1.1064081,"down","CLDN10",9071,"0007155 // cell adhesion // traceable author statement /// 0016338 // calcium-independent cell-cell adhesion // inferred from sequence or structural similarity","0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from electronic annotation /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0005923 // tight junction // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from sequence or structural similarity","chr13:96085852-96232013 (+) // 88.75 // q32.1"]
["11748114_a_at",-0.20360756,0.013282776,0.023916245,-0.3473463,-0.013282776,0.07143736,0.92378485,0.79553497,1.0287752,0.04092779,1.0287752,"up","SYT12",91683,"0006810 // transport // inferred from electronic annotation","0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation","chr11:66790189-66816537 (+) // 91.69 // q13.2"]
["11728132_s_at",-0.14427137,0.036566257,0.13388634,-0.081932545,0.33506203,-0.036566734,0.88334584,0.7035713,-1.0449693,-0.06346059,1.0449693,"down","EXOC8",149371,"0006810 // transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0000145 // exocyst // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0030426 // growth cone // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation","chr1:231468476-231473598 (-) // 94.22 // q42.2"]
["11734303_a_at",-0.5109339,-0.032998085,-0.17615318,0.09200001,0.03299761,0.14143848,0.33757716,0.08599521,-1.2560034,-0.32884035,1.2560034,"down","SPTBN4",57731,"0007016 // cytoskeletal anchoring at plasma membrane // traceable author statement /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0007628 // adult walking behavior // inferred from electronic annotation /// 0009566 // fertilization // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // traceable author statement /// 0019226 // transmission of nerve impulse // inferred from electronic annotation /// 0030534 // adult behavior // inferred from electronic annotation /// 0040018 // positive regulation of multicellular organism growth // inferred from electronic annotation /// 0051693 // actin filament capping // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0008091 // spectrin // inferred from direct assay /// 0008091 // spectrin // inferred from electronic annotation /// 0008091 // spectrin // inferred from sequence or structural similarity /// 0016363 // nuclear matrix // inferred from direct assay /// 0016363 // nuclear matrix // inferred from sequence or structural similarity /// 0016605 // PML body // inferred from direct assay /// 0016605 // PML body // inferred from sequence or structural similarity /// 0030424 // axon // inferred from electronic annotation /// 0043194 // initial segment // inferred from sequence or structural similarity /// 0043203 // axon hillock // inferred from electronic annotation /// 0070852 // cell body fiber // inferred from electronic annotation","0003779 // actin binding // traceable author statement /// 0003779 // actin binding // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005200 // structural constituent of cytoskeleton // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0030506 // ankyrin binding // inferred from direct assay /// 0030506 // ankyrin binding // inferred from sequence or structural similarity","chr19:40973049-41082365 (+) // 96.72 // q13.2"]
["11751470_a_at",-0.2829752,0.0010004044,-0.027842045,-0.0010001659,0.026950836,0.11420345,0.50595504,0.19573429,-1.109562,-0.14999034,1.109562,"down","PLEKHS1",79949,"","","0005543 // phospholipid binding // inferred from electronic annotation","chr10:115535213-115541284 (+) // 81.18 // q25.3"]
["11760186_at",-0.23148298,-0.25983262,0.05852151,0.011937618,0.08542156,-0.01193738,0.4832741,0.1780566,-1.1271962,-0.17273864,1.1271962,"down","ACTA2",59,"0006936 // muscle contraction // traceable author statement /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0009615 // response to virus // inferred from expression pattern /// 0014829 // vascular smooth muscle contraction // inferred from electronic annotation /// 0072144 // glomerular mesangial cell development // inferred from expression pattern","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0030485 // smooth muscle contractile fiber // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation","chr10:90702370-90751092 (-) // 76.3 // q23.31"]
["11737467_at",-0.044734,0.11203289,0.044734,-0.2971139,-0.17194223,0.16592836,0.69903666,0.39556178,1.1006738,0.13838696,1.1006738,"up","TMCO5A",145942,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr15:38225453-38243622 (+) // 88.29 // q14"]
["11758100_s_at",0.029459,0.011214256,-0.04951763,-0.0022230148,0.0022230148,-0.07261276,0.81108165,0.56597555,1.0148427,0.021256197,1.0148427,"up","C1S",716,"0006508 // proteolysis // inferred from electronic annotation /// 0006956 // complement activation // traceable author statement /// 0006956 // complement activation // inferred from electronic annotation /// 0006958 // complement activation, classical pathway // traceable author statement /// 0006958 // complement activation, classical pathway // inferred from electronic annotation /// 0010001 // glial cell differentiation // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from direct assay /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:7177383-7178293 (+) // 95.06 // p13.31"]
["11721478_a_at",0.14134979,-0.16019154,-0.11774778,0.1538701,0.055095673,-0.055095673,0.72784555,0.43575066,-1.0694135,-0.09681985,1.0694135,"down","GOLPH3L",55204,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0008289 // lipid binding // inferred from electronic annotation","chr1:150618705-150669672 (-) // 89.53 // q21.3"]
["11753166_a_at",-0.552207,0.21951866,-0.018131733,-0.42637253,0.018131733,0.28118372,0.9343501,0.8204127,-1.05306,-0.07458771,1.05306,"down","WDR6",11180,"0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0010507 // negative regulation of autophagy // inferred from mutant phenotype","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008180 // signalosome // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0043560 // insulin receptor substrate binding // inferred from electronic annotation","chr3:49044822-49050783 (+) // 100.0 // p21.31"]
["11751917_a_at",0.32489777,0.1660757,0.11432552,-0.11432552,-0.29649162,-0.46919537,0.13997883,0.014730438,1.4094222,0.4951038,1.4094222,"up","MTMR12",54545,"0016311 // dephosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0016791 // phosphatase activity // inferred from electronic annotation","chr5:32227114-32313044 (-) // 91.05 // p13.3"]
["11721076_at",0.009290695,-0.1909008,-0.09430599,0.10032177,0.032989502,-0.009290695,0.3876776,0.113625586,-1.0968089,-0.1333122,1.0968089,"down","MTCH2",23788,"0006810 // transport // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:47638863-47664221 (-) // 89.45 // p11.2"]
["11756901_a_at",-0.15094662,-0.025615215,0.12511492,-0.003042698,0.003042698,0.19264364,0.75236857,0.47153476,-1.0580175,-0.08136348,1.0580175,"down","MASP1",5648,"0001867 // complement activation, lectin pathway // inferred from electronic annotation /// 0001867 // complement activation, lectin pathway // inferred from mutant phenotype /// 0001867 // complement activation, lectin pathway // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006956 // complement activation // traceable author statement /// 0006956 // complement activation // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0045916 // negative regulation of complement activation // inferred from direct assay","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from direct assay /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from direct assay /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048306 // calcium-dependent protein binding // inferred from physical interaction","chr3:186951873-187009525 (-) // 89.2 // q27.3"]
["11748464_a_at",-0.09547424,-0.062088013,0.062088013,-0.19116259,0.10189819,0.14295673,0.87629575,0.6892817,-1.0350657,-0.049722277,1.0350657,"down","CORIN",10699,"0003050 // regulation of systemic arterial blood pressure by atrial natriuretic peptide // inferred from mutant phenotype /// 0003050 // regulation of systemic arterial blood pressure by atrial natriuretic peptide // inferred from sequence or structural similarity /// 0003050 // regulation of systemic arterial blood pressure by atrial natriuretic peptide // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0007565 // female pregnancy // inferred from mutant phenotype /// 0008217 // regulation of blood pressure // inferred from sequence or structural similarity /// 0016486 // peptide hormone processing // inferred from direct assay /// 0016486 // peptide hormone processing // inferred from electronic annotation /// 0035813 // regulation of renal sodium excretion // inferred from sequence or structural similarity","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from direct assay /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005044 // scavenger receptor activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0070008 // serine-type exopeptidase activity // inferred from electronic annotation","chr4:47644859-47840123 (-) // 99.96 // p12"]
["11737680_at",-0.1920073,0,0,-0.13709593,0.15072846,0.27221394,0.62890345,0.31024376,-1.1167332,-0.15928455,1.1167332,"down","GPR149",344758,"0001546 // preantral ovarian follicle growth // inferred from electronic annotation /// 0001547 // antral ovarian follicle growth // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0060206 // estrous cycle phase // inferred from electronic annotation /// 0060280 // negative regulation of ovulation // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation","chr3:154055149-154147504 (-) // 100.0 // q25.2"]
["11735288_x_at",0.07045889,0.14991665,-0.052804947,-0.17543077,0.052804947,-0.05918932,0.5779801,0.2582101,1.084073,0.116461836,1.084073,"up","AP4S1",11154,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005794 // Golgi apparatus // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005215 // transporter activity // traceable author statement /// 0008565 // protein transporter activity // inferred from electronic annotation","chr14:31494675-31555007 (+) // 82.19 // q12"]
["11733460_x_at",0.025893211,-0.025893211,0.16412449,-0.34017754,-0.11176586,0.14609957,0.67090863,0.35947868,1.1147004,0.15665606,1.1147004,"up","PSG6",5675,"0007565 // female pregnancy // non-traceable author statement /// 0007565 // female pregnancy // traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation","","chr19:43406236-43422003 (-) // 52.47 // q13.31"]
["11763441_a_at",0.009833336,-0.009833336,-0.22149754,-0.074189186,0.061282158,0.24868536,0.5900756,0.27067116,-1.1114364,-0.15242535,1.1114364,"down","WNK4",65266,"0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006811 // ion transport // inferred from sequence or structural similarity /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // inferred from sequence or structural similarity /// 0008104 // protein localization // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0050794 // regulation of cellular process // inferred from sequence or structural similarity /// 0050794 // regulation of cellular process // inferred from electronic annotation /// 0090188 // negative regulation of pancreatic juice secretion // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0005923 // tight junction // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from sequence or structural similarity /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr17:40935626-40948175 (+) // 89.21 // q21.31"]
["11735405_x_at",-0.13852596,0.038855553,0.13666725,0,-0.030114174,0,0.92407423,0.79649305,1.0156268,0.022370353,1.0156268,"up","ANKS1B",56899,"","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0015030 // Cajal body // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0046875 // ephrin receptor binding // inferred from physical interaction","chr12:99129070-100378510 (-) // 97.36 // q23.1"]
["11720052_s_at",0.19904327,0.086426735,0.07584286,-0.14011574,-0.07584286,-0.17743969,0.097812995,0.0069885957,1.1905023,0.25157037,1.1905023,"up","EMG1",10436,"0006364 // rRNA processing // inferred from sequence or structural similarity /// 0006364 // rRNA processing // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0042274 // ribosomal small subunit biogenesis // inferred from sequence or structural similarity","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from sequence or structural similarity /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity","0003723 // RNA binding // inferred from sequence or structural similarity /// 0003723 // RNA binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0019843 // rRNA binding // inferred from electronic annotation /// 0070037 // rRNA (pseudouridine) methyltransferase activity // inferred from direct assay","chr12:7079943-7085139 (+) // 97.12 // p13.31"]
["11745442_x_at",-0.08461666,0.025811195,-0.11446667,0.28082275,0.013707161,-0.013707161,0.5313454,0.2162564,-1.1106198,-0.151365,1.1106198,"down","ACTR2",10097,"0006928 // cellular component movement // traceable author statement /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0008356 // asymmetric cell division // inferred from electronic annotation /// 0016482 // cytoplasmic transport // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0033206 // cytokinesis after meiosis // inferred from electronic annotation /// 0051321 // meiotic cell cycle // inferred from electronic annotation /// 0051653 // spindle localization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005885 // Arp2/3 protein complex // inferred from reviewed computational analysis /// 0005885 // Arp2/3 protein complex // traceable author statement /// 0005938 // cell cortex // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0030478 // actin cap // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation","chr2:65455309-65496361 (+) // 94.96 // p14"]
["11744956_a_at",-0.02286148,0.018212795,-0.018212795,0.22515059,0.19794083,-0.11328602,0.67812943,0.36784515,-1.0798935,-0.110888995,1.0798935,"down","PBRM1",55193,"0001890 // placenta development // inferred from electronic annotation /// 0006338 // chromatin remodeling // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007067 // mitosis // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0016568 // chromatin modification // inferred from electronic annotation","0000228 // nuclear chromosome // non-traceable author statement /// 0000776 // kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // non-traceable author statement /// 0003682 // chromatin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr3:52581857-52713740 (-) // 97.4 // p21.1"]
["11741670_x_at",-0.2914412,0.033082485,-0.004029274,0.004029274,-0.09706259,0.34632587,0.6766884,0.3662707,-1.126536,-0.17189343,1.126536,"down","ESR2",2100,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001541 // ovarian follicle development // inferred from electronic annotation /// 0001764 // neuron migration // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007420 // brain development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0030308 // negative regulation of cell growth // non-traceable author statement /// 0030520 // intracellular estrogen receptor signaling pathway // traceable author statement /// 0030520 // intracellular estrogen receptor signaling pathway // inferred from electronic annotation /// 0030522 // intracellular receptor mediated signaling pathway // non-traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // traceable author statement /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0050680 // negative regulation of epithelial cell proliferation // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0060065 // uterus development // inferred from electronic annotation /// 0060068 // vagina development // inferred from electronic annotation /// 0060740 // prostate gland epithelium morphogenesis // inferred from electronic annotation /// 0060743 // epithelial cell maturation involved in prostate gland development // inferred from electronic annotation /// 0060766 // negative regulation of androgen receptor signaling pathway // inferred from electronic annotation /// 1900116 // extracellular negative regulation of signal transduction // non-traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from direct assay","0001046 // core promoter sequence-specific DNA binding // inferred from direct assay /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // traceable author statement /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // non-traceable author statement /// 0005496 // steroid binding // traceable author statement /// 0005496 // steroid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0030284 // estrogen receptor activity // traceable author statement /// 0034056 // estrogen response element binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048019 // receptor antagonist activity // non-traceable author statement","chr14:64693752-64805268 (-) // 99.38 // q23.2"]
["11758265_s_at",-0.1941905,0.051368237,0.09746027,-0.1446724,-0.051368237,0.1765213,0.98307776,0.9509155,-1.0059888,-0.008614295,1.0059888,"down","KIAA1468",57614,"","","","chr18:59973628-59974346 (+) // 93.36 // q21.33"]
["11741193_a_at",0.072509766,0.041627884,-0.06502724,-0.041627884,-0.07722092,0.19009018,0.9795089,0.9409591,-1.0051265,-0.007377049,1.0051265,"down","ACP2",53,"0001501 // skeletal system development // inferred from electronic annotation /// 0007040 // lysosome organization // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0048102 // autophagic cell death // inferred from electronic annotation","0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0019717 // synaptosome // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043202 // lysosomal lumen // inferred from electronic annotation","0001784 // phosphotyrosine binding // inferred from electronic annotation /// 0003993 // acid phosphatase activity // inferred from electronic annotation /// 0003993 // acid phosphatase activity // traceable author statement /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr11:47267069-47270457 (-) // 100.0 // p11.2"]
["11727801_a_at",-0.16340113,-0.15176105,-0.06584406,0.06584406,0.2059722,0.19808245,0.09607793,0.006661438,-1.217258,-0.28363496,1.217258,"down","POP4",10775,"0006364 // rRNA processing // inferred from electronic annotation /// 0006364 // rRNA processing // traceable author statement /// 0006379 // mRNA cleavage // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from electronic annotation /// 0008033 // tRNA processing // traceable author statement","0000172 // ribonuclease MRP complex // inferred from electronic annotation /// 0000172 // ribonuclease MRP complex // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005655 // nucleolar ribonuclease P complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0030677 // ribonuclease P complex // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0004526 // ribonuclease P activity // inferred from electronic annotation /// 0004526 // ribonuclease P activity // traceable author statement /// 0004540 // ribonuclease activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation","chr19:30097227-30108157 (+) // 82.41 // q12"]
["11715937_a_at",0.10354519,-0.14072704,-0.10354519,0.22737312,0.2493267,-0.14080048,0.6577758,0.3423577,-1.1164166,-0.15887545,1.1164166,"down","KHDRBS1",10657,"0000086 // G2/M transition of mitotic cell cycle // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006397 // mRNA processing // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007166 // cell surface receptor signaling pathway // inferred from direct assay /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0046831 // regulation of RNA export from nucleus // inferred from sequence or structural similarity /// 0046831 // regulation of RNA export from nucleus // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0005070 // SH3/SH2 adaptor activity // inferred from physical interaction /// 0005070 // SH3/SH2 adaptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation","chr1:32479294-32509483 (+) // 94.54 // p35.1"]
["11725618_a_at",-0.044866085,0.026831627,-0.1216259,0.33556175,0.29334736,-0.026831627,0.38690263,0.11302808,-1.1869391,-0.24724594,1.1869391,"down","GAD1",2571,"0006538 // glutamate catabolic process // traceable author statement /// 0006540 // glutamate decarboxylation to succinate // traceable author statement /// 0006540 // glutamate decarboxylation to succinate // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // traceable author statement /// 0018352 // protein-pyridoxal-5-phosphate linkage // traceable author statement /// 0019752 // carboxylic acid metabolic process // inferred from electronic annotation /// 0042136 // neurotransmitter biosynthetic process // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from direct assay /// 0005622 // intracellular // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0012506 // vesicle membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0061202 // clathrin sculpted gamma-aminobutyric acid transport vesicle membrane // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004351 // glutamate decarboxylase activity // inferred from direct assay /// 0004351 // glutamate decarboxylase activity // inferred from electronic annotation /// 0004351 // glutamate decarboxylase activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation","chr2:171673062-171717657 (+) // 97.87 // q31.1"]
["11744858_a_at",-0.13179016,-0.17700243,-0.07944727,0.15229225,0.07944727,0.12768173,0.057012707,0.0021425716,-1.1885647,-0.24922039,1.1885647,"down","LHPP",64077,"0006470 // protein dephosphorylation // inferred from sequence or structural similarity /// 0006796 // phosphate-containing compound metabolic process // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay","0000287 // magnesium ion binding // inferred from sequence or structural similarity /// 0004427 // inorganic diphosphatase activity // inferred from direct assay /// 0004427 // inorganic diphosphatase activity // inferred from electronic annotation /// 0008969 // phosphohistidine phosphatase activity // inferred from sequence or structural similarity /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:126150388-126302710 (+) // 83.74 // q26.13"]
["11728240_s_at",-0.2699628,0.042253017,0.13759851,-0.04225278,-0.13261104,0.12483764,0.9757667,0.9306979,-1.0093046,-0.013361694,1.0093046,"down","RRAGD",58528,"0032008 // positive regulation of TOR signaling cascade // non-traceable author statement /// 0034613 // cellular protein localization // inferred from sequence or structural similarity /// 0071230 // cellular response to amino acid stimulus // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from physical interaction","chr6:90074040-90122189 (-) // 90.49 // q15"]
["11734385_a_at",0.1607709,0.19471693,0.10375738,-0.10375738,-0.29233027,-0.24153805,0.07732892,0.00420274,1.2884384,0.3656236,1.2884384,"up","PROCA1",147011,"0016042 // lipid catabolic process // inferred from electronic annotation","","0004623 // phospholipase A2 activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation","chr17:27030533-27038868 (-) // 92.03 // q11.2"]
["11736961_at",-0.3933189,-0.002676487,0.13503122,-0.042128563,0.07165432,0.002676487,0.818255,0.57813704,-1.0700825,-0.09772209,1.0700825,"down","ZNF365",22891,"","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation","chr10:64133915-64240047 (+) // 92.35 // q21.2"]
["11756066_a_at",0.08642721,-0.04144764,0.08051491,-0.12254095,-0.040265083,0.040265083,0.5782959,0.25845405,1.0589823,0.08267841,1.0589823,"up","LRRC23",10233,"","","","chr12:7014004-7015795 (+) // 100.0 // p13.31"]
["11755001_a_at",0.1800704,0.060688972,0.17432165,-0.06068945,-0.11832714,-0.17667675,0.10118901,0.0074485927,1.1949289,0.25692475,1.1949289,"up","ARHGAP32",9743,"0007154 // cell communication // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr11:128838658-129034323 (-) // 97.09 // q24.3"]
["11721040_a_at",-0.13139582,0.08908367,0.11471224,0.32158422,-0.16831636,-0.08908367,0.9953883,0.9879711,1.0019001,0.0027386304,1.0019001,"up","TRAPPC11",60684,"0006810 // transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005794 // Golgi apparatus // inferred from electronic annotation","","chr4:184580441-184634745 (+) // 98.03 // q35.1"]
["11760030_x_at",-0.21978521,-0.15993357,0.1481905,0.024552822,-0.024552822,0.056610584,0.7419523,0.4557215,-1.0688403,-0.09604626,1.0688403,"down","WDR90",197335,"","","","chr16:699324-706201 (+) // 99.41 // p13.3"]
["11744964_a_at",0.12372923,-0.17385912,-0.1574893,0.22026062,0.089319706,-0.089319706,0.6560125,0.34015167,-1.1039131,-0.14262657,1.1039131,"down","MIR17HG /// MIR18A /// MIR19A /// MIR19B1 /// MIR20A /// MIR92A1","406953 /// 406979 /// 406980 /// 406982 /// 407048 /// 407975","","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr13:92000073-92006829 (+) // 92.06 // q31.3"]
["11735821_s_at",-0.08711338,-0.14427662,-0.008133411,0.008133411,0.23896599,0.30912876,0.2706214,0.055455215,-1.2018447,-0.26525047,1.2018447,"down","AQP12A /// AQP12B","375318 /// 653437","0006810 // transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0046930 // pore complex // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0015288 // porin activity // inferred from electronic annotation","chr2:241631267-241637896 (+) // 96.58 // q37.3 /// chr2:241615838-241622317 (-) // 97.45 // q37.3"]
["11756074_a_at",0.0030446053,-0.0030446053,-0.23353195,0.02557993,0.13992167,-0.016607761,0.5509725,0.23312679,-1.0923804,-0.12747534,1.0923804,"down","MMP7",4316,"0002779 // antibacterial peptide secretion // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030574 // collagen catabolic process // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation /// 0050829 // defense response to Gram-negative bacterium // inferred from electronic annotation /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0031012 // extracellular matrix // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:102395706-102398327 (-) // 100.0 // q22.2"]
["11754737_a_at",0.007481575,-0.023098946,-0.005501747,0.12980318,0.005501747,-0.096265316,0.91535354,0.77629465,-1.0139967,-0.020052986,1.0139967,"down","ZNF41",7592,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:47306100-47309644 (-) // 92.72 // p11.23"]
["11746008_x_at",0.15214825,0.18044567,0.11259699,-0.15650558,-0.11259699,-0.20708418,0.037180126,0.0007996,1.2372404,0.3071259,1.2372404,"up","NEXN",91624,"0030334 // regulation of cell migration // inferred from direct assay /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0051493 // regulation of cytoskeleton organization // inferred from expression pattern","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0005924 // cell-substrate adherens junction // inferred from electronic annotation /// 0030018 // Z disc // inferred from sequence or structural similarity /// 0030018 // Z disc // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0008307 // structural constituent of muscle // inferred from mutant phenotype /// 0051015 // actin filament binding // inferred from direct assay /// 0051015 // actin filament binding // inferred from electronic annotation","chr1:78354281-78408907 (+) // 93.37 // p31.1"]
["11742186_a_at",-0.0059776306,-0.034571648,0.0059776306,0.12657666,-0.03523135,0.11912155,0.51824045,0.20555454,-1.0582492,-0.08167945,1.0582492,"down","TMOD2",29767,"0007270 // neuron-neuron synaptic transmission // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007611 // learning or memory // inferred from electronic annotation /// 0045745 // positive regulation of G-protein coupled receptor protein signaling pathway // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005523 // tropomyosin binding // inferred from electronic annotation /// 0005523 // tropomyosin binding // traceable author statement","chr15:52043757-52108556 (+) // 83.39 // q21.2"]
["11729283_a_at",0.10577822,-0.10226679,0.011004448,0.18510103,-0.05859804,-0.011004925,0.9018768,0.74304885,-1.0236062,-0.033660766,1.0236062,"down","MEF2B /// MEF2BNB /// MEF2BNB-MEF2B","100271849 /// 4207 /// 729991","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007507 // heart development // inferred from expression pattern /// 0007517 // muscle organ development // traceable author statement","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr19:19256375-19281098 (-) // 95.2 // p13.11"]
["11721053_s_at",-0.04781151,-0.037431717,-0.023306847,0.029132843,0.2149725,0.023306847,0.39692545,0.118997514,-1.0907502,-0.12532076,1.0907502,"down","KLHDC5",57542,"","","","chr12:27932813-27955972 (+) // 90.33 // p11.22"]
["11730370_a_at",0.15549946,0.1521039,0.15605545,-0.20935631,-0.1521039,-0.19059563,0.014193614,3.6606878e-5,1.264504,0.33857155,1.264504,"up","EIF4E3",317649,"0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005845 // mRNA cap binding complex // inferred from sequence or structural similarity","0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation","chr3:71728271-71803924 (-) // 86.94 // p13"]
["11721980_a_at",-0.32547283,-0.080328465,0.13827801,-0.044433117,0.17784882,0.044433117,0.6830291,0.37462643,-1.1083837,-0.14845733,1.1083837,"down","SLC36A1",206358,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006865 // amino acid transport // traceable author statement /// 0006865 // amino acid transport // inferred from electronic annotation /// 0015804 // neutral amino acid transport // inferred from electronic annotation /// 0015808 // L-alanine transport // inferred from electronic annotation /// 0015816 // glycine transport // inferred from electronic annotation /// 0015824 // proline transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0035524 // proline transmembrane transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation /// 0015175 // neutral amino acid transmembrane transporter activity // inferred from electronic annotation /// 0015180 // L-alanine transmembrane transporter activity // inferred from electronic annotation /// 0015187 // glycine transmembrane transporter activity // inferred from electronic annotation /// 0015193 // L-proline transmembrane transporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation","chr5:150827156-150871940 (+) // 97.93 // q33.1"]
["11756189_x_at",0.10489607,-0.11582804,0.028771877,-0.028772354,-0.26118279,0.13032484,0.869399,0.6745526,1.0418566,0.059156783,1.0418566,"up","SAMD10",140700,"","","","chr20:62605467-62611382 (-) // 98.12 // q13.33"]
["11732852_a_at",-0.20214415,0.034201145,0.30729914,-0.12134409,-0.034201145,0.21246052,0.95936877,0.88473594,1.0192305,0.027480334,1.0192305,"up","ATP1B4",23439,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0015672 // monovalent inorganic cation transport // inferred from direct assay /// 0015672 // monovalent inorganic cation transport // traceable author statement /// 0046034 // ATP metabolic process // inferred from electronic annotation","0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005637 // nuclear inner membrane // inferred from direct assay /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005391 // sodium:potassium-exchanging ATPase activity // inferred from electronic annotation /// 0015077 // monovalent inorganic cation transmembrane transporter activity // traceable author statement","chrX:119495939-119517168 (+) // 73.84 // q24"]
["11738735_at",-0.007261753,0.18326235,0.0072619915,-0.20997071,0.05441618,-0.15636921,0.48385322,0.17853445,1.1212144,0.16506216,1.1212144,"up","VN1R4",317703,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0019236 // response to pheromone // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0016503 // pheromone receptor activity // inferred from electronic annotation","chr19:53769928-53770976 (-) // 100.0 // q13.42"]
["11743452_s_at",-0.17842484,-0.26861858,-0.4025917,0.2299242,0.17842484,0.23125362,0.05328126,0.001811099,-1.4107013,-0.49641252,1.4107013,"down","CDCA4",55038,"0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","","chr14:105475909-105487425 (-) // 99.84 // q32.33"]
["11752778_a_at",-0.19278955,0.04787779,-0.06084442,-0.032577038,0.032577515,0.13457346,0.5722937,0.25242332,-1.0818071,-0.113443315,1.0818071,"down","TTC31",64427,"","","","chr2:74710213-74720210 (+) // 100.0 // p13.1"]
["11723217_x_at",0.24025345,-0.011514664,-0.044825554,0.2174015,-0.11265755,0.011514664,0.95477736,0.87241465,1.0157543,0.022551531,1.0157543,"up","SFXN3",81855,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // traceable author statement /// 0008324 // cation transmembrane transporter activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr10:102790962-102800998 (+) // 88.67 // q24.31"]
["11721681_a_at",0.03503132,-0.03503132,-0.076812744,-0.039915085,0.0666275,0.05018139,0.64890313,0.33227468,-1.0361519,-0.051235497,1.0361519,"down","RBMX2",51634,"","","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chrX:129535951-129547628 (+) // 83.86 // q26.1"]
["11749696_a_at",-0.08049369,0.27292395,0.035034895,0.13722563,-0.11907983,-0.035034895,0.8082443,0.5606389,1.058082,0.081451416,1.058082,"up","PCDH8",5100,"0001756 // somitogenesis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0016331 // morphogenesis of embryonic epithelium // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr13:53418274-53422775 (-) // 97.39 // q14.3"]
["11725541_a_at",-0.5316644,0.091538906,0.009380817,-0.43584728,-0.009380817,0.17477512,0.9464876,0.85077006,-1.0377296,-0.0534306,1.0377296,"down","GATA4",2626,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0001702 // gastrulation with mouth forming second // inferred from electronic annotation /// 0001706 // endoderm formation // inferred from electronic annotation /// 0001947 // heart looping // inferred from sequence or structural similarity /// 0003181 // atrioventricular valve morphogenesis // inferred from electronic annotation /// 0003197 // endocardial cushion development // inferred from sequence or structural similarity /// 0003197 // endocardial cushion development // inferred from electronic annotation /// 0003208 // cardiac ventricle morphogenesis // traceable author statement /// 0003215 // cardiac right ventricle morphogenesis // inferred from sequence or structural similarity /// 0003229 // ventricular cardiac muscle tissue development // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from sequence or structural similarity /// 0003289 // atrial septum primum morphogenesis // inferred from sequence or structural similarity /// 0003290 // atrial septum secundum morphogenesis // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007267 // cell-cell signaling // inferred from sequence or structural similarity /// 0007267 // cell-cell signaling // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007492 // endoderm development // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008584 // male gonad development // inferred from expression pattern /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from sequence or structural similarity /// 0023019 // signal transduction involved in regulation of gene expression // inferred from electronic annotation /// 0030509 // BMP signaling pathway // inferred from electronic annotation /// 0030513 // positive regulation of BMP signaling pathway // inferred from electronic annotation /// 0035050 // embryonic heart tube development // inferred from electronic annotation /// 0035054 // embryonic heart tube anterior/posterior pattern specification // inferred from sequence or structural similarity /// 0035054 // embryonic heart tube anterior/posterior pattern specification // inferred from electronic annotation /// 0035239 // tube morphogenesis // inferred from electronic annotation /// 0042493 // response to drug // inferred from mutant phenotype /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048557 // embryonic digestive tract morphogenesis // inferred from electronic annotation /// 0048598 // embryonic morphogenesis // inferred from electronic annotation /// 0048617 // embryonic foregut morphogenesis // inferred from sequence or structural similarity /// 0048617 // embryonic foregut morphogenesis // inferred from electronic annotation /// 0051891 // positive regulation of cardioblast differentiation // inferred from sequence or structural similarity /// 0055007 // cardiac muscle cell differentiation // inferred from expression pattern /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0060008 // Sertoli cell differentiation // inferred from electronic annotation /// 0060043 // regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0060045 // positive regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0060070 // canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0060395 // SMAD protein signal transduction // inferred from electronic annotation /// 0060413 // atrial septum morphogenesis // inferred from mutant phenotype /// 0060464 // lung lobe formation // inferred from electronic annotation /// 0060575 // intestinal epithelial cell differentiation // inferred from direct assay /// 0071371 // cellular response to gonadotropin stimulus // inferred from electronic annotation /// 0071372 // cellular response to follicle-stimulating hormone stimulus // inferred from electronic annotation /// 0072148 // epithelial cell fate commitment // inferred from electronic annotation /// 0072520 // seminiferous tubule development // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0003677 // DNA binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0033613 // activating transcription factor binding // inferred from sequence or structural similarity /// 0033613 // activating transcription factor binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from sequence or structural similarity /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:11561735-11617507 (+) // 95.94 // p23.1"]
["11748666_a_at",-0.10151243,0.04000044,0.05338812,0.35628748,-0.04000044,-0.1644659,0.91023093,0.76229423,-1.0376465,-0.05331508,1.0376465,"down","ZNF558",148156,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:8921947-8942984 (-) // 82.01 // p13.2"]
["11757863_x_at",0.16480923,0.0069437027,-0.07264614,0.156703,-0.0069437027,-0.07237625,0.980567,0.94437295,1.0050318,0.007241185,1.0050318,"up","C9orf123",90871,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr9:7798346-7799501 (-) // 90.66 // p24.1"]
["11746013_s_at",-0.08072519,0.11496687,-0.052859306,-0.20308399,0.052859306,0.13275719,0.998722,0.9975695,-1.0002657,-0.0003832984,1.0002657,"down","NCF1 /// NCF1B /// NCF1C","653361 /// 654816 /// 654817","0001878 // response to yeast // inferred from electronic annotation /// 0001909 // leukocyte mediated cytotoxicity // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002679 // respiratory burst involved in defense response // inferred from electronic annotation /// 0006184 // GTP catabolic process // traceable author statement /// 0006612 // protein targeting to membrane // inferred from direct assay /// 0006691 // leukotriene metabolic process // inferred from electronic annotation /// 0006801 // superoxide metabolic process // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006968 // cellular defense response // inferred from electronic annotation /// 0006968 // cellular defense response // traceable author statement /// 0007154 // cell communication // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0009617 // response to bacterium // inferred from electronic annotation /// 0042554 // superoxide anion generation // inferred from electronic annotation /// 0042554 // superoxide anion generation // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042742 // defense response to bacterium // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045730 // respiratory burst // traceable author statement /// 0045730 // respiratory burst // inferred from electronic annotation /// 0045986 // negative regulation of smooth muscle contraction // inferred from electronic annotation /// 0050665 // hydrogen peroxide biosynthetic process // inferred from electronic annotation /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation /// 0050832 // defense response to fungus // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070946 // neutrophil mediated killing of gram-positive bacterium // inferred from electronic annotation /// 0070947 // neutrophil mediated killing of fungus // inferred from electronic annotation","0005625 // soluble fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0032010 // phagolysosome // traceable author statement /// 0043020 // NADPH oxidase complex // traceable author statement","0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // traceable author statement /// 0008942 // nitrite reductase [NAD(P)H] activity // inferred from electronic annotation /// 0009055 // electron carrier activity // traceable author statement /// 0016175 // superoxide-generating NADPH oxidase activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from physical interaction /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from direct assay","chr7:72634659-72650039 (+) // 99.56 // q11.23 /// chr7:74188357-74203719 (+) // 99.19 // q11.23 /// chr7:74572384-74587768 (-) // 99.19 // q11.23"]
["11746049_a_at",0.09171677,0.018918991,-0.109294415,0.20918989,-0.20281553,-0.018918991,0.99133104,0.97387815,1.0032135,0.004628703,1.0032135,"up","VPS52",6293,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","","chr6:33218085-33239824 (-) // 98.66 // p21.32"]
["11758941_x_at",0.20355606,0.09616184,0.12440491,-0.12628746,-0.09616184,-0.11381245,0.050299264,0.0016007783,1.1920639,0.2534616,1.1920639,"up","MOB1A",55233,"0035329 // hippo signaling cascade // inferred from direct assay /// 0035329 // hippo signaling cascade // traceable author statement","0005829 // cytosol // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:74378364-74406087 (-) // 83.85 // p13.1"]
["11754815_a_at",0.14926052,0.102152824,0.021679401,-0.14985132,-0.021678925,-0.040815353,0.23361175,0.041399688,1.1186919,0.16181278,1.1186919,"up","LDLRAP1",26119,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006810 // transport // non-traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // inferred from direct assay /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // non-traceable author statement /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0009967 // positive regulation of signal transduction // inferred from direct assay /// 0031623 // receptor internalization // inferred from mutant phenotype /// 0042632 // cholesterol homeostasis // inferred from mutant phenotype /// 0042632 // cholesterol homeostasis // inferred from electronic annotation /// 0042982 // amyloid precursor protein metabolic process // inferred from mutant phenotype /// 0043393 // regulation of protein binding // inferred from mutant phenotype /// 0048260 // positive regulation of receptor-mediated endocytosis // inferred from mutant phenotype /// 0090003 // regulation of establishment of protein localization in plasma membrane // inferred from mutant phenotype /// 0090118 // receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport // inferred from mutant phenotype /// 0090205 // positive regulation of cholesterol metabolic process // inferred by curator","0005737 // cytoplasm // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005769 // early endosome // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005883 // neurofilament // inferred from sequence or structural similarity /// 0005883 // neurofilament // inferred from electronic annotation /// 0009898 // internal side of plasma membrane // inferred from direct assay /// 0009925 // basal plasma membrane // inferred from direct assay /// 0030121 // AP-1 adaptor complex // inferred from direct assay /// 0030122 // AP-2 adaptor complex // inferred from direct assay /// 0030424 // axon // inferred from sequence or structural similarity /// 0030424 // axon // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from direct assay","0001540 // beta-amyloid binding // inferred from physical interaction /// 0001540 // beta-amyloid binding // inferred from electronic annotation /// 0001784 // phosphotyrosine binding // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from direct assay /// 0030159 // receptor signaling complex scaffold activity // inferred from mutant phenotype /// 0030276 // clathrin binding // inferred from direct assay /// 0035591 // signaling adaptor activity // inferred from direct assay /// 0035612 // AP-2 adaptor complex binding // inferred from direct assay /// 0035615 // clathrin adaptor activity // inferred from direct assay /// 0050750 // low-density lipoprotein particle receptor binding // inferred from physical interaction","chr1:25879177-25895375 (+) // 72.98 // p36.11"]
["11733367_x_at",0.10081673,0.08578873,0.0671854,-0.15935135,-0.0671854,-0.12964344,0.057002112,0.0021369332,1.1513478,0.20332365,1.1513478,"up","C19orf60",55049,"","","0005515 // protein binding // inferred from physical interaction","chr19:18699494-18703147 (+) // 97.6 // p13.11"]
["11756890_s_at",-0.15523529,-0.16488361,-0.0767231,0.20341206,0.2050457,0.0767231,0.07880048,0.0044461368,-1.2260413,-0.2940076,1.2260413,"down","ATP5A1",498,"0001937 // negative regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0006172 // ADP biosynthetic process // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from sequence or structural similarity /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006754 // ATP biosynthetic process // inferred by curator /// 0006754 // ATP biosynthetic process // non-traceable author statement /// 0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0009790 // embryo development // inferred from sequence or structural similarity /// 0009790 // embryo development // inferred from electronic annotation /// 0015986 // ATP synthesis coupled proton transport // inferred from electronic annotation /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0042776 // mitochondrial ATP synthesis coupled proton transport // inferred by curator /// 0042776 // mitochondrial ATP synthesis coupled proton transport // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046034 // ATP metabolic process // inferred from electronic annotation","0000275 // mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) // inferred from electronic annotation /// 0005739 // mitochondrion // inferred by curator /// 0005739 // mitochondrion // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from direct assay /// 0005759 // mitochondrial matrix // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008180 // signalosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016469 // proton-transporting two-sector ATPase complex // inferred from electronic annotation /// 0033178 // proton-transporting two-sector ATPase complex, catalytic domain // inferred from electronic annotation /// 0045261 // proton-transporting ATP synthase complex, catalytic core F(1) // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0016887 // ATPase activity // inferred from electronic annotation /// 0022857 // transmembrane transporter activity // inferred by curator /// 0042288 // MHC class I protein binding // inferred from direct assay /// 0043499 // eukaryotic cell surface binding // inferred from direct assay /// 0043531 // ADP binding // inferred from electronic annotation /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism // inferred from sequence or structural similarity /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism // inferred from electronic annotation /// 0046961 // proton-transporting ATPase activity, rotational mechanism // inferred from electronic annotation","chr18:43664115-43668662 (-) // 62.35 // q21.1"]
["11737168_a_at",-0.14070654,-0.05059576,-0.058071613,0.23442173,0.18573475,0.050595284,0.15428987,0.018069984,-1.1810269,-0.24004187,1.1810269,"down","STRN3",29966,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0032355 // response to estradiol stimulus // inferred from sequence or structural similarity /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0033147 // negative regulation of intracellular estrogen receptor signaling pathway // inferred from sequence or structural similarity /// 0033147 // negative regulation of intracellular estrogen receptor signaling pathway // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0000159 // protein phosphatase type 2A complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005654 // nucleoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from sequence or structural similarity /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043234 // protein complex // inferred from sequence or structural similarity /// 0043234 // protein complex // inferred from electronic annotation","0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // non-traceable author statement /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from direct assay /// 0032403 // protein complex binding // inferred from electronic annotation /// 0051721 // protein phosphatase 2A binding // inferred from direct assay /// 0070016 // armadillo repeat domain binding // inferred from physical interaction","chr14:31363004-31495607 (-) // 97.57 // q12"]
["11760891_s_at",0.031461716,-0.031461716,0.1314249,-0.10211468,-0.054619312,0.31276703,0.9850591,0.9559032,-1.0057019,-0.008202739,1.0057019,"down","GPAT2",150763,"0006072 // glycerol-3-phosphate metabolic process // inferred from sequence or structural similarity /// 0006072 // glycerol-3-phosphate metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0016024 // CDP-diacylglycerol biosynthetic process // inferred from electronic annotation /// 0019432 // triglyceride biosynthetic process // inferred from sequence or structural similarity /// 0019432 // triglyceride biosynthetic process // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // inferred from electronic annotation","0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004366 // glycerol-3-phosphate O-acyltransferase activity // inferred from sequence or structural similarity /// 0004366 // glycerol-3-phosphate O-acyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation","chr2:96455412-96463594 (+) // 96.76 // q11.1 /// chr2:96692480-96700664 (-) // 96.82 // q11.1"]
["11740761_at",-0.28988242,0.14932442,0.05803156,-0.05803132,-0.2643535,0.12294769,0.94012463,0.8341501,1.0273802,0.038970213,1.0273802,"up","PRKG2",5593,"0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046209 // nitric oxide metabolic process // traceable author statement /// 0050999 // regulation of nitric-oxide synthase activity // traceable author statement","0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004692 // cGMP-dependent protein kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0030553 // cGMP binding // inferred from electronic annotation","chr4:82009812-82126215 (-) // 98.81 // q21.21"]
["11722958_a_at",0.02477169,0.07021904,-0.02477169,-0.11350441,-0.08952522,0.09438753,0.73792446,0.44929805,1.0421915,0.0596204,1.0421915,"up","ABLIM2",84448,"0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0030016 // myofibril // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0003779 // actin binding // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:7967053-8160559 (-) // 95.88 // p16.1"]
["11762347_at",-0.022156715,-0.16674519,0.016318321,-0.016317844,0.2398014,0.11937332,0.42598766,0.13718489,-1.1264735,-0.17181343,1.1264735,"down","RNF7",9616,"0006916 // anti-apoptosis // traceable author statement /// 0008631 // induction of apoptosis by oxidative stress // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0045116 // protein neddylation // inferred from direct assay /// 0051775 // response to redox state // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement","0005507 // copper ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0019788 // NEDD8 ligase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:141457183-141461869 (+) // 73.21 // q23"]
["11749877_x_at",-0.010555267,0.073343754,0.12922573,-0.046723843,-0.077852726,0.010555267,0.3668424,0.10160012,1.0732691,0.10201188,1.0732691,"up","MKNK2",2872,"0006417 // regulation of translation // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007243 // intracellular protein kinase cascade // inferred from direct assay /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from direct assay /// 0071243 // cellular response to arsenic-containing substance // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016605 // PML body // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:2039496-2046692 (-) // 99.16 // p13.3"]
["11752328_a_at",0.33145618,0.51116943,0.41863394,-0.57883406,-0.53802204,-0.3314557,0.033966877,0.0006161828,1.8701973,0.90319043,1.8701973,"up","IGF1R",3480,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0006955 // immune response // inferred from mutant phenotype /// 0007165 // signal transduction // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0014065 // phosphatidylinositol 3-kinase cascade // inferred by curator /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030010 // establishment of cell polarity // inferred from electronic annotation /// 0030238 // male sex determination // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0030879 // mammary gland development // inferred from electronic annotation /// 0031017 // exocrine pancreas development // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0032467 // positive regulation of cytokinesis // inferred from electronic annotation /// 0033197 // response to vitamin E // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043409 // negative regulation of MAPK cascade // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from mutant phenotype /// 0045768 // positive regulation of anti-apoptosis // inferred from electronic annotation /// 0046328 // regulation of JNK cascade // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048009 // insulin-like growth factor receptor signaling pathway // inferred from direct assay /// 0048009 // insulin-like growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // inferred from direct assay /// 0051054 // positive regulation of DNA metabolic process // inferred from electronic annotation /// 0051262 // protein tetramerization // inferred from direct assay /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0051389 // inactivation of MAPKK activity // inferred from direct assay /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0051898 // negative regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0060740 // prostate gland epithelium morphogenesis // inferred from electronic annotation /// 0090031 // positive regulation of steroid hormone biosynthetic process // inferred from electronic annotation","0005792 // microsome // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred by curator /// 0005901 // caveola // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005010 // insulin-like growth factor-activated receptor activity // inferred from direct assay /// 0005010 // insulin-like growth factor-activated receptor activity // traceable author statement /// 0005158 // insulin receptor binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005520 // insulin-like growth factor binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0031994 // insulin-like growth factor I binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from physical interaction /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation /// 0043559 // insulin binding // inferred from physical interaction /// 0043560 // insulin receptor substrate binding // inferred from physical interaction /// 0043560 // insulin receptor substrate binding // inferred from electronic annotation","chr15:99192810-99460184 (+) // 99.96 // q26.3"]
["11762990_x_at",-0.32785892,0.015201092,0.13901567,-0.19866037,-0.015200615,0.25292397,0.8950898,0.7300432,-1.050373,-0.07090168,1.050373,"down","MGC40069 /// TRAC /// TRAJ17 /// TRAV20","28663 /// 28738 /// 28755 /// 348035","0006968 // cellular defense response // non-traceable author statement /// 0031295 // T cell costimulation // traceable author statement /// 0050776 // regulation of immune response // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0042287 // MHC protein binding // non-traceable author statement /// 0042605 // peptide antigen binding // non-traceable author statement","chr14:22749033-23019607 (+) // 98.46 // q11.2"]
["11763376_s_at",-0.16053629,-0.14221668,-0.13443136,0.13443184,0.22065735,0.20556355,0.025706321,0.00027530405,-1.2592915,-0.3326123,1.2592915,"down","PCBP2",5094,"0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016071 // mRNA metabolic process // non-traceable author statement /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0050687 // negative regulation of defense response to virus // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr12:53861154-53862449 (+) // 95.63 // q13.13"]
["11757360_s_at",-0.23404217,-0.08216667,-0.088918686,0.12922573,0.08216667,0.08927536,0.11815345,0.010383726,-1.1771231,-0.23526517,1.1771231,"down","BAG3",9531,"0006457 // protein folding // non-traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // non-traceable author statement /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0021510 // spinal cord development // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0019717 // synaptosome // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0051087 // chaperone binding // inferred from electronic annotation","chr10:121436768-121437325 (+) // 96.53 // q26.11"]
["11734469_a_at",-0.3382988,-0.031294823,0.12927818,-0.21526957,0.031294823,0.33036804,0.8138293,0.57085127,-1.0934619,-0.12890291,1.0934619,"down","TMEM215",401498,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr9:32783496-32789197 (+) // 94.94 // p21.1"]
["11746159_a_at",0.4710331,0.1119318,0.27593184,-0.1119318,-0.39531374,-0.56443596,0.15621783,0.018582914,1.5621425,0.643526,1.5621425,"up","PBX3",5090,"0002087 // regulation of respiratory gaseous exchange by neurological system process // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007387 // anterior compartment pattern formation // traceable author statement /// 0007388 // posterior compartment specification // traceable author statement /// 0007585 // respiratory gaseous exchange // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0021516 // dorsal spinal cord development // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr9:128677962-128728616 (+) // 92.41 // q33.3"]
["11758843_at",-0.0133013725,-0.06927824,-0.16675282,0.053223133,0.0133013725,0.20713472,0.32181463,0.078494236,-1.1284406,-0.1743305,1.1284406,"down","MIER2",54531,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr19:301443-336175 (-) // 59.85 // p13.3"]
["11722039_x_at",0.10227203,-0.06624985,-0.123468876,-0.15510225,0.06624985,0.22152042,0.8300892,0.59877306,-1.0521728,-0.073371634,1.0521728,"down","FES",2242,"0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0008360 // regulation of cell shape // inferred from mutant phenotype /// 0010976 // positive regulation of neuron projection development // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0030155 // regulation of cell adhesion // inferred from mutant phenotype /// 0031116 // positive regulation of microtubule polymerization // inferred from mutant phenotype /// 0042127 // regulation of cell proliferation // inferred from mutant phenotype /// 0043304 // regulation of mast cell degranulation // inferred from mutant phenotype /// 0045595 // regulation of cell differentiation // inferred from mutant phenotype /// 0045639 // positive regulation of myeloid cell differentiation // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0060627 // regulation of vesicle-mediated transport // traceable author statement /// 2000145 // regulation of cell motility // inferred from mutant phenotype /// 2000251 // positive regulation of actin cytoskeleton reorganization // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031234 // extrinsic to internal side of plasma membrane // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from direct assay /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0034987 // immunoglobulin receptor binding // inferred from direct assay /// 0035091 // phosphatidylinositol binding // inferred from direct assay","chr15:91427641-91439080 (+) // 98.28 // q26.1"]
["11718271_a_at",0.061717987,0.00746727,0.0046653748,-0.17139626,-0.0046653748,-0.056843758,0.40540344,0.12394782,1.0734478,0.102252066,1.0734478,"up","TAX1BP1",8887,"0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from sequence or structural similarity /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from electronic annotation /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0045087 // innate immune response // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019900 // kinase binding // inferred from sequence or structural similarity /// 0019900 // kinase binding // inferred from electronic annotation","chr7:27779716-27869658 (+) // 98.78 // p15.2"]
["11745573_s_at",0.116542816,-0.06647301,0.05234289,0.10461283,-0.05234289,-0.12944031,0.7904509,0.5304554,1.0423653,0.05986098,1.0423653,"up","LOC646938 /// TBC1D2B","23102 /// 646938","0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation","chr15:79044378-79047093 (+) // 99.89 // q25.1 /// chr15:78289065-78291767 (-) // 96.85 // q24.3"]
["11738742_at",-0.14417124,-0.10222387,0.12144089,0.035861015,-0.035861015,0.055161953,0.7888244,0.5279329,-1.0424937,-0.060038667,1.0424937,"down","OR2AT4",341152,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:74799757-74800799 (-) // 100.0 // q13.4"]
["11744609_a_at",0.27925777,-0.047283173,-0.14378548,0.4154086,-0.008112431,0.008112431,0.82746434,0.59408796,-1.0785351,-0.1090731,1.0785351,"down","ATXN7",6314,"0000226 // microtubule cytoskeleton organization // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006997 // nucleus organization // traceable author statement /// 0007601 // visual perception // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0016578 // histone deubiquitination // inferred from direct assay /// 0042326 // negative regulation of phosphorylation // inferred from electronic annotation /// 0043569 // negative regulation of insulin-like growth factor receptor signaling pathway // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016363 // nuclear matrix // inferred from electronic annotation","0003682 // chromatin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation","chr3:63850232-63982293 (+) // 93.17 // p14.1"]
["11755557_a_at",0.2257824,0.23880482,-0.019812584,-0.19635868,-0.07948065,0.019812584,0.34460363,0.089666806,1.1757656,0.23360051,1.1757656,"up","HACE1",57531,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006464 // cellular protein modification process // inferred from electronic annotation /// 0006944 // cellular membrane fusion // inferred from mutant phenotype /// 0007030 // Golgi organization // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0016601 // Rac protein signal transduction // traceable author statement /// 0030334 // regulation of cell migration // inferred from mutant phenotype /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay","0000139 // Golgi membrane // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // not recorded /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from direct assay /// 0048365 // Rac GTPase binding // inferred from physical interaction","chr6:105177044-105179761 (-) // 56.44 // q16.3"]
["11758662_s_at",0.48838854,-0.07983637,0.15015125,0.07983637,-0.44867325,-0.19117212,0.4753144,0.17241995,1.2949569,0.3729041,1.2949569,"up","ZNF358",140467,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0019827 // stem cell maintenance // inferred from sequence or structural similarity /// 0021915 // neural tube development // inferred from sequence or structural similarity /// 0035115 // embryonic forelimb morphogenesis // inferred from sequence or structural similarity","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:7584992-7585304 (+) // 93.29 // p13.2"]
["11743654_a_at",-0.28871655,0.10056162,-0.05573058,-0.21617389,0.18149161,0.05573058,0.83900136,0.6166947,-1.063125,-0.088311255,1.063125,"down","APOH",350,"0001937 // negative regulation of endothelial cell proliferation // inferred from direct assay /// 0006641 // triglyceride metabolic process // inferred from direct assay /// 0007596 // blood coagulation // inferred from electronic annotation /// 0007597 // blood coagulation, intrinsic pathway // inferred from direct assay /// 0010596 // negative regulation of endothelial cell migration // inferred from direct assay /// 0016525 // negative regulation of angiogenesis // inferred from direct assay /// 0030193 // regulation of blood coagulation // inferred from electronic annotation /// 0030194 // positive regulation of blood coagulation // traceable author statement /// 0030195 // negative regulation of blood coagulation // inferred from direct assay /// 0031100 // organ regeneration // inferred from electronic annotation /// 0031639 // plasminogen activation // inferred from direct assay /// 0033033 // negative regulation of myeloid cell apoptotic process // inferred from direct assay /// 0034197 // triglyceride transport // inferred from sequence or structural similarity /// 0034197 // triglyceride transport // inferred from electronic annotation /// 0034392 // negative regulation of smooth muscle cell apoptotic process // inferred from direct assay /// 0051006 // positive regulation of lipoprotein lipase activity // inferred from direct assay /// 0051917 // regulation of fibrinolysis // inferred from direct assay /// 0051918 // negative regulation of fibrinolysis // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0034361 // very-low-density lipoprotein particle // inferred from direct assay /// 0034364 // high-density lipoprotein particle // inferred from direct assay /// 0042627 // chylomicron // inferred from direct assay","0001948 // glycoprotein binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from direct assay /// 0008201 // heparin binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from direct assay /// 0008289 // lipid binding // inferred from electronic annotation /// 0043499 // eukaryotic cell surface binding // inferred from direct assay /// 0060230 // lipoprotein lipase activator activity // inferred from direct assay","chr17:64208146-64225541 (-) // 81.96 // q24.2"]
["11759167_at",0.07256317,-0.14708757,-0.03319168,-0.024235249,0.024235249,0.10879612,0.69231385,0.38688004,-1.0512973,-0.07217072,1.0512973,"down","HIST1H2BC /// HIST1H2BE /// HIST1H2BF /// HIST1H2BG /// HIST1H2BI","8339 /// 8343 /// 8344 /// 8346 /// 8347","0006334 // nucleosome assembly // non-traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation","0000786 // nucleosome // non-traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr6:26183957-26184458 (+) // 99.8 // p22.2"]
["11757066_s_at",0.014978886,0.06802654,0.24880362,-0.014978886,-0.2765422,-0.18320799,0.28472367,0.06138895,1.2048438,0.26884606,1.2048438,"up","ING5",84289,"0006260 // DNA replication // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006473 // protein acetylation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0016568 // chromatin modification // inferred from electronic annotation /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045926 // negative regulation of growth // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0070776 // MOZ/MORF histone acetyltransferase complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0035064 // methylated histone residue binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:242641459-242668890 (+) // 84.15 // q37.3"]
["11741304_a_at",0.16868353,-0.09741354,-0.024071693,-0.08152294,0.024377346,0.024071693,0.9147598,0.77333945,1.0187199,0.026757449,1.0187199,"up","NRG1",3084,"0006916 // anti-apoptosis // inferred from direct assay /// 0007154 // cell communication // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from direct assay /// 0007171 // activation of transmembrane receptor protein tyrosine kinase activity // inferred by curator /// 0007171 // activation of transmembrane receptor protein tyrosine kinase activity // inferred from direct assay /// 0007171 // activation of transmembrane receptor protein tyrosine kinase activity // non-traceable author statement /// 0007219 // Notch signaling pathway // inferred from sequence or structural similarity /// 0007399 // nervous system development // traceable author statement /// 0008283 // cell proliferation // inferred from direct assay /// 0009790 // embryo development // inferred from electronic annotation /// 0010667 // negative regulation of cardiac muscle cell apoptotic process // inferred from direct assay /// 0014032 // neural crest cell development // traceable author statement /// 0030307 // positive regulation of cell growth // inferred from direct assay /// 0030879 // mammary gland development // traceable author statement /// 0042060 // wound healing // inferred from direct assay /// 0042060 // wound healing // traceable author statement /// 0043496 // regulation of protein homodimerization activity // traceable author statement /// 0043497 // regulation of protein heterodimerization activity // inferred from direct assay /// 0043624 // cellular protein complex disassembly // inferred from genetic interaction /// 0045785 // positive regulation of cell adhesion // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0051048 // negative regulation of secretion // inferred from direct assay /// 0051155 // positive regulation of striated muscle cell differentiation // inferred from sequence or structural similarity /// 0055007 // cardiac muscle cell differentiation // inferred from sequence or structural similarity /// 0055012 // ventricular cardiac muscle cell differentiation // inferred from direct assay /// 0060045 // positive regulation of cardiac muscle cell proliferation // inferred from direct assay /// 0061098 // positive regulation of protein tyrosine kinase activity // inferred from direct assay","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from direct assay","0003712 // transcription cofactor activity // inferred from direct assay /// 0005102 // receptor binding // inferred from physical interaction /// 0005102 // receptor binding // inferred from electronic annotation /// 0005125 // cytokine activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from direct assay /// 0008083 // growth factor activity // non-traceable author statement /// 0008083 // growth factor activity // inferred from electronic annotation /// 0030296 // protein tyrosine kinase activator activity // inferred from direct assay /// 0030297 // transmembrane receptor protein tyrosine kinase activator activity // inferred by curator /// 0030297 // transmembrane receptor protein tyrosine kinase activator activity // non-traceable author statement /// 0030971 // receptor tyrosine kinase binding // non-traceable author statement /// 0043125 // ErbB-3 class receptor binding // inferred from direct assay /// 0043125 // ErbB-3 class receptor binding // inferred from physical interaction","chr8:32405752-32622661 (+) // 97.89 // p12"]
["11735289_a_at",-0.0771637,-0.14211988,-0.0768795,0.0768795,0.16395426,0.20947695,0.083795294,0.005036709,-1.1882386,-0.24882458,1.1882386,"down","SLC6A5",9152,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0005328 // neurotransmitter:sodium symporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation /// 0015375 // glycine:sodium symporter activity // traceable author statement","chr11:20620945-20676608 (+) // 98.31 // p15.1"]
["11762675_at",0.20439267,0.044236183,-0.23342156,0.2440548,-0.044236183,-0.10958958,0.9608575,0.888747,-1.0174848,-0.02500722,1.0174848,"down","FCGR1A",2209,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006911 // phagocytosis, engulfment // traceable author statement /// 0006955 // immune response // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030669 // clathrin-coated endocytic vesicle membrane // traceable author statement /// 0031901 // early endosome membrane // traceable author statement","0004872 // receptor activity // inferred from electronic annotation /// 0005057 // receptor signaling protein activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019864 // IgG binding // inferred from electronic annotation","chr1:149369293-149763584 (+) // 99.11 // q21.2"]
["11717614_at",0.007475376,-0.007475853,0.04728651,-0.21484852,0.01302433,-0.16431332,0.40565294,0.12423763,1.100232,0.13780777,1.100232,"up","KIF13B",23303,"0006605 // protein targeting // traceable author statement /// 0007018 // microtubule-based movement // traceable author statement /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0042110 // T cell activation // non-traceable author statement /// 0050770 // regulation of axonogenesis // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0030424 // axon // inferred from direct assay /// 0030424 // axon // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003777 // microtubule motor activity // non-traceable author statement /// 0003777 // microtubule motor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0071889 // 14-3-3 protein binding // inferred from direct assay","chr8:28924795-29120610 (-) // 98.96 // p12"]
["11736554_x_at",0.061836243,-0.05914116,0.07219124,0.05914116,-0.414598,-0.43860245,0.45665938,0.15873756,1.2223425,0.28964856,1.2223425,"up","ZNF223",7766,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:44556163-44572142 (+) // 79.7 // q13.31"]
["11744413_x_at",-0.08443546,-0.07503319,-0.051686287,0.051686287,0.076187134,0.07061291,0.028162481,0.00036717558,-1.0992709,-0.13654701,1.0992709,"down","HSPA1A /// HSPA1B","3303 /// 3304","0006402 // mRNA catabolic process // inferred from direct assay /// 0006916 // anti-apoptosis // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0042026 // protein refolding // inferred from direct assay /// 0090084 // negative regulation of inclusion body assembly // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0008180 // signalosome // inferred from direct assay /// 0016234 // inclusion body // inferred from direct assay /// 0016235 // aggresome // inferred from direct assay /// 0016607 // nuclear speck // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0044183 // protein binding involved in protein folding // inferred from direct assay /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0051082 // unfolded protein binding // traceable author statement","chr6:31783319-31785722 (+) // 98.08 // p21.33"]
["11735960_at",-0.30344772,-0.15976286,0.035362244,0.10967493,-0.035362244,0.07808304,0.44075918,0.14666988,-1.143467,-0.19341466,1.143467,"down","FGF6",2251,"0001502 // cartilage condensation // inferred from electronic annotation /// 0001525 // angiogenesis // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from genetic interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045445 // myoblast differentiation // inferred from electronic annotation /// 0051781 // positive regulation of cell division // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation","0008083 // growth factor activity // inferred from electronic annotation /// 0008083 // growth factor activity // traceable author statement","chr12:4543307-4554780 (-) // 99.33 // p13.32"]
["11759011_at",-0.18702412,-0.16011333,-0.09628391,0.24313831,0.16806221,0.09628391,0.06860313,0.003221222,-1.2457104,-0.31696868,1.2457104,"down","PRPF4",9128,"0000375 // RNA splicing, via transesterification reactions // non-traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // non-traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred by curator /// 0005681 // spliceosomal complex // non-traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0015030 // Cajal body // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0071001 // U4/U6 snRNP // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr9:116037622-116055454 (+) // 91.14 // q32"]
["11732901_a_at",0.0017518997,-0.0017518997,0.1988535,0.06340122,-0.10510349,-0.2225399,0.53557074,0.21977971,1.1129318,0.15436524,1.1129318,"up","APOBEC3A /// APOBEC3A_B /// APOBEC3B","100913187 /// 200315 /// 9582","0008152 // metabolic process // inferred from electronic annotation /// 0009615 // response to virus // inferred from electronic annotation /// 0009972 // cytidine deamination // inferred from direct assay /// 0009972 // cytidine deamination // inferred from mutant phenotype /// 0010529 // negative regulation of transposition // inferred from direct assay /// 0044356 // clearance of foreign intracellular DNA by conversion of DNA cytidine to uridine // inferred from direct assay /// 0045071 // negative regulation of viral genome replication // inferred from direct assay /// 0045087 // innate immune response // inferred from direct assay /// 0051607 // defense response to virus // inferred from direct assay /// 0070383 // DNA cytosine deamination // inferred from direct assay /// 0070383 // DNA cytosine deamination // inferred from mutant phenotype /// 0071466 // cellular response to xenobiotic stimulus // inferred from direct assay /// 0080111 // DNA demethylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004126 // cytidine deaminase activity // inferred from direct assay /// 0004126 // cytidine deaminase activity // inferred from mutant phenotype /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016814 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr22:39378351-39388781 (+) // 98.39 // q13.1"]
["11743241_s_at",-0.20547843,0.098250866,-0.10398126,0.24464107,-0.06601238,0.06601238,0.61667687,0.29684636,-1.1110702,-0.15194991,1.1110702,"down","KRTAP21-1 /// LOC731932","337977 /// 731932","0001942 // hair follicle development // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0022405 // hair cycle process // inferred from electronic annotation /// 0031077 // post-embryonic camera-type eye development // inferred from electronic annotation /// 0042640 // anagen // inferred from electronic annotation /// 0043480 // pigment accumulation in tissues // inferred from electronic annotation /// 0043588 // skin development // inferred from electronic annotation /// 0048589 // developmental growth // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation","0005882 // intermediate filament // inferred from electronic annotation","","chr13:64320933-64321842 (+) // 48.07 // q21.31"]
["11748883_a_at",-0.006476879,-0.11311722,0.025993347,0.09198046,0.006477356,-0.045340538,0.73639005,0.4468581,-1.0344802,-0.04890605,1.0344802,"down","FAM217B",63939,"","","","chr20:58515443-58520182 (+) // 96.39 // q13.33"]
["11728769_at",-0.15316486,0.08814764,-0.11663866,-0.08814764,0.22479486,0.17325497,0.57219446,0.2522527,-1.1202748,-0.16385263,1.1202748,"down","ST6GALNAC3",256435,"0006486 // protein glycosylation // inferred from electronic annotation /// 0006677 // glycosylceramide metabolic process // inferred from direct assay /// 0006687 // glycosphingolipid metabolic process // inferred from direct assay /// 0009100 // glycoprotein metabolic process // inferred from direct assay","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030173 // integral to Golgi membrane // inferred from electronic annotation","0008373 // sialyltransferase activity // inferred from direct assay /// 0008373 // sialyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr1:76540386-77100283 (+) // 93.7 // p31.1"]
["11734568_a_at",0.011089802,0.019480228,0.037003994,-0.11155987,-0.011089802,-0.026144981,0.34275046,0.08865229,1.0512625,0.072122954,1.0512625,"up","MUTYH",4595,"0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006284 // base-excision repair // inferred from electronic annotation /// 0006284 // base-excision repair // traceable author statement /// 0006285 // base-excision repair, AP site formation // traceable author statement /// 0006298 // mismatch repair // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0045007 // depurination // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0032405 // MutLalpha complex binding // inferred from direct assay /// 0032406 // MutLbeta complex binding // inferred from direct assay /// 0032407 // MutSalpha complex binding // inferred from direct assay /// 0032408 // MutSbeta complex binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation","chr1:45794914-45805796 (-) // 96.95 // p34.1"]
["11727594_a_at",-0.13574266,-0.2055831,0.2068758,-0.00077962875,0.20987129,0.00077962875,0.7537354,0.47402442,-1.0828053,-0.11477382,1.0828053,"down","KIAA2026",158358,"","","","chr9:5919021-6008484 (-) // 97.77 // p24.1"]
["11731914_at",-0.015595436,0.12751007,-0.19122171,0.20248747,0.015595436,-0.015595436,0.7435406,0.45842695,-1.0672747,-0.09393153,1.0672747,"down","AMIGO1",57463,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from sequence or structural similarity /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007157 // heterophilic cell-cell adhesion // inferred from sequence or structural similarity /// 0007157 // heterophilic cell-cell adhesion // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007413 // axonal fasciculation // inferred from sequence or structural similarity /// 0007413 // axonal fasciculation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042552 // myelination // inferred from sequence or structural similarity /// 0042552 // myelination // inferred from electronic annotation /// 0050772 // positive regulation of axonogenesis // inferred from sequence or structural similarity /// 0050772 // positive regulation of axonogenesis // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","","chr1:110046800-110052352 (-) // 99.51 // p13.3"]
["11736454_x_at",-0.1285088,0.087598085,0.13702655,-0.19090176,-0.05402994,0.054029703,0.72046655,0.42584473,1.0685635,0.09567259,1.0685635,"up","UGT2B10",7365,"0006629 // lipid metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0015020 // glucuronosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016758 // transferase activity, transferring hexosyl groups // inferred from electronic annotation","chr4:69681712-69697739 (+) // 91.09 // q13.2"]
["11742802_a_at",0.087717056,0.028873444,0.029313087,-0.11899376,-0.028873444,-0.04718685,0.19252498,0.028074855,1.081964,0.11365252,1.081964,"up","SRD5A1",6715,"0001655 // urogenital system development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006702 // androgen biosynthetic process // traceable author statement /// 0006702 // androgen biosynthetic process // inferred from electronic annotation /// 0007530 // sex determination // non-traceable author statement /// 0007548 // sex differentiation // inferred from electronic annotation /// 0008202 // steroid metabolic process // traceable author statement /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008209 // androgen metabolic process // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0009267 // cellular response to starvation // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014850 // response to muscle activity // inferred from electronic annotation /// 0016101 // diterpenoid metabolic process // inferred from electronic annotation /// 0021510 // spinal cord development // inferred from electronic annotation /// 0021766 // hippocampus development // inferred from electronic annotation /// 0021794 // thalamus development // inferred from electronic annotation /// 0021854 // hypothalamus development // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030539 // male genitalia development // inferred from electronic annotation /// 0030540 // female genitalia development // inferred from electronic annotation /// 0032354 // response to follicle-stimulating hormone stimulus // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0033574 // response to testosterone stimulus // inferred from electronic annotation /// 0042428 // serotonin metabolic process // inferred from electronic annotation /// 0042448 // progesterone metabolic process // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042747 // circadian sleep/wake cycle, REM sleep // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060348 // bone development // inferred from electronic annotation /// 0060416 // response to growth hormone stimulus // inferred from electronic annotation /// 0060992 // response to fungicide // inferred from electronic annotation /// 0071320 // cellular response to cAMP // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0071392 // cellular response to estradiol stimulus // inferred from electronic annotation /// 0071394 // cellular response to testosterone stimulus // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0071549 // cellular response to dexamethasone stimulus // inferred from electronic annotation /// 0071872 // cellular response to epinephrine stimulus // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043209 // myelin sheath // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070852 // cell body fiber // inferred from electronic annotation","0003865 // 3-oxo-5-alpha-steroid 4-dehydrogenase activity // inferred from direct assay /// 0003865 // 3-oxo-5-alpha-steroid 4-dehydrogenase activity // inferred from electronic annotation /// 0009055 // electron carrier activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016627 // oxidoreductase activity, acting on the CH-CH group of donors // inferred from electronic annotation /// 0033218 // amide binding // inferred from electronic annotation /// 0050213 // progesterone 5-alpha-reductase activity // inferred from electronic annotation /// 0070402 // NADPH binding // inferred from electronic annotation","chr5:6633433-6669673 (+) // 90.23 // p15.31"]
["11751688_a_at",0.023275375,0.04036045,-0.008605957,0.008605957,-0.21531868,-0.27843428,0.38350877,0.11093785,1.1329302,0.18005893,1.1329302,"up","C6orf72",116254,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:149887501-149901564 (+) // 99.9 // q25.1"]
["11747710_a_at",-0.05605507,-0.024560928,-0.045951843,0.05785656,0.024560928,0.09373474,0.11724536,0.01017337,-1.0724473,-0.10090675,1.0724473,"down","SMARCD2",6603,"0006337 // nucleosome disassembly // inferred from direct assay /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // non-traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0016514 // SWI/SNF complex // inferred from direct assay","0003713 // transcription coactivator activity // non-traceable author statement","chr17:61909851-61920331 (-) // 95.98 // q23.3"]
["11745193_a_at",-0.15521955,-0.26192474,-0.17287779,0.15521955,0.16963291,0.24545813,0.03846829,0.0008675711,-1.3074697,-0.38677755,1.3074697,"down","SERPINA12",145264,"0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // not recorded /// 0030162 // regulation of proteolysis // not recorded","0005576 // extracellular region // inferred from electronic annotation","0004867 // serine-type endopeptidase inhibitor activity // not recorded /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr14:94953610-94970559 (-) // 99.93 // q32.13"]
["11743930_at",0.15497255,0.2600193,0.10571051,-0.10571051,-0.1658597,-0.17123556,0.06713806,0.0030464183,1.2493428,0.32116938,1.2493428,"up","UHRF1BP1L",23074,"","","","chr12:100429368-100536646 (-) // 93.1 // q23.1"]
["11749618_x_at",0.09541106,0.054596424,-0.14498019,-0.13238764,-0.030031204,0.030031204,0.8470902,0.63061386,1.032259,0.045804977,1.032259,"up","LILRA2",11027,"0006952 // defense response // traceable author statement /// 0007165 // signal transduction // traceable author statement","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003823 // antigen binding // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement","chr19:55084376-55098862 (+) // 74.09 // q13.42"]
["11733073_a_at",0.32443047,-0.24357414,-0.23809242,0.7166357,0.06941891,-0.06941891,0.69939464,0.39626583,-1.2237345,-0.29129058,1.2237345,"down","DDX21",9188,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005730 // nucleolus // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004004 // ATP-dependent RNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:70715657-70744655 (+) // 99.6 // q22.1"]
["11750486_x_at",-0.084411144,-0.07385445,-0.0970459,0.19979191,0.07385492,0.11217117,0.08222333,0.004854934,-1.1596664,-0.21370986,1.1596664,"down","HDAC8",55869,"0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006333 // chromatin assembly or disassembly // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016575 // histone deacetylation // traceable author statement /// 0016575 // histone deacetylation // inferred from electronic annotation","0000118 // histone deacetylase complex // traceable author statement /// 0000228 // nuclear chromosome // traceable author statement /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0004407 // histone deacetylase activity // traceable author statement /// 0004407 // histone deacetylase activity // inferred from electronic annotation /// 0008134 // transcription factor binding // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0031078 // histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0032041 // NAD-dependent histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0032129 // histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0034739 // histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046969 // NAD-dependent histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0046970 // NAD-dependent histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation","chrX:71549661-71792693 (-) // 99.4 // q13.1"]
["11754901_x_at",0.0057644844,-0.20709324,-0.08924389,0.23737669,-0.0057644844,0.1446228,0.31853756,0.076972,-1.1665671,-0.22226927,1.1665671,"down","MYOCD",93649,"0001560 // regulation of cell growth by extracellular stimulus // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0003231 // cardiac ventricle development // inferred from electronic annotation /// 0003257 // positive regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0010667 // negative regulation of cardiac muscle cell apoptotic process // inferred from electronic annotation /// 0010832 // negative regulation of myotube differentiation // inferred from electronic annotation /// 0030511 // positive regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0035051 // cardiac cell differentiation // non-traceable author statement /// 0035065 // regulation of histone acetylation // inferred from sequence or structural similarity /// 0035065 // regulation of histone acetylation // inferred from electronic annotation /// 0042692 // muscle cell differentiation // inferred from electronic annotation /// 0043388 // positive regulation of DNA binding // inferred from electronic annotation /// 0045661 // regulation of myoblast differentiation // inferred from electronic annotation /// 0045736 // negative regulation of cyclin-dependent protein kinase activity // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0045987 // positive regulation of smooth muscle contraction // inferred from direct assay /// 0048286 // lung alveolus development // inferred from electronic annotation /// 0048565 // digestive tract development // inferred from electronic annotation /// 0051145 // smooth muscle cell differentiation // inferred from mutant phenotype /// 0051145 // smooth muscle cell differentiation // inferred from electronic annotation /// 0051150 // regulation of smooth muscle cell differentiation // traceable author statement /// 0051150 // regulation of smooth muscle cell differentiation // inferred from electronic annotation /// 0051152 // positive regulation of smooth muscle cell differentiation // inferred from direct assay /// 0055007 // cardiac muscle cell differentiation // inferred from sequence or structural similarity /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0055012 // ventricular cardiac muscle cell differentiation // inferred from electronic annotation /// 0060065 // uterus development // inferred from electronic annotation /// 0060157 // urinary bladder development // inferred from electronic annotation /// 0071956 // cellular component maintenance at cellular level // inferred from electronic annotation /// 0097070 // ductus arteriosus closure // inferred from electronic annotation /// 2000721 // positive regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation // inferred from direct assay /// 2000724 // positive regulation of cardiac vascular smooth muscle cell differentiation // inferred from sequence or structural similarity /// 2000727 // positive regulation of cardiac muscle cell differentiation // inferred from direct assay /// 2001015 // negative regulation of skeletal muscle cell differentiation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0001046 // core promoter sequence-specific DNA binding // inferred from direct assay /// 0001076 // RNA polymerase II transcription factor binding transcription factor activity // inferred from sequence or structural similarity /// 0001076 // RNA polymerase II transcription factor binding transcription factor activity // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from direct assay /// 0035035 // histone acetyltransferase binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from electronic annotation /// 0070412 // R-SMAD binding // inferred from electronic annotation","chr17:12626161-12661623 (+) // 91.6 // p12"]
["11724367_a_at",0.0009913445,-0.39147615,-0.31864405,0.08494139,0.005320072,-0.0009913445,0.3594018,0.097753026,-1.2025801,-0.26613298,1.2025801,"down","SEMA6D",80031,"0006501 // C-terminal protein lipidation // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0016254 // preassembly of GPI anchor in ER membrane // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0030215 // semaphorin receptor binding // inferred from electronic annotation","chr15:48010081-48066418 (+) // 98.29 // q21.1"]
["11751280_x_at",0.16429949,0.097191334,-0.004837513,-0.07660484,-0.081588745,0.004837513,0.3101128,0.073157765,1.0993645,0.13666981,1.0993645,"up","SLC38A7",55238,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from sequence or structural similarity /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006865 // amino acid transport // inferred from electronic annotation /// 0006868 // glutamine transport // inferred from sequence or structural similarity /// 0015807 // L-amino acid transport // inferred from sequence or structural similarity","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from sequence or structural similarity /// 0043025 // neuronal cell body // inferred from sequence or structural similarity","0015179 // L-amino acid transmembrane transporter activity // inferred from sequence or structural similarity /// 0015186 // L-glutamine transmembrane transporter activity // inferred from sequence or structural similarity","chr16:58701265-58718674 (-) // 99.1 // q21"]
["11718779_at",0.012638569,0.23128223,0.06378698,-0.012638092,-0.09089565,-0.08467817,0.32360336,0.07937681,1.1214043,0.1653065,1.1214043,"up","S100A2",6273,"0043542 // endothelial cell migration // inferred from mutant phenotype","","0005509 // calcium ion binding // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation","chr1:153533578-153538326 (-) // 90.02 // q21.3"]
["11747654_a_at",0.020170689,0.015240669,-0.23950434,0.02299881,-0.02806902,-0.015240669,0.7844666,0.52067053,-1.0433772,-0.06126076,1.0433772,"down","SGK2",10110,"0001558 // regulation of cell growth // traceable author statement /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006979 // response to oxidative stress // traceable author statement /// 0007243 // intracellular protein kinase cascade // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032411 // positive regulation of transporter activity // traceable author statement /// 0042127 // regulation of cell proliferation // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0015459 // potassium channel regulator activity // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017080 // sodium channel regulator activity // non-traceable author statement /// 0017080 // sodium channel regulator activity // traceable author statement","chr20:42193425-42214266 (+) // 76.71 // q13.12"]
["11724867_a_at",0.000415802,-0.0596323,-0.015418053,0.11815405,0.03318119,-0.000415802,0.4153218,0.13041079,-1.0534959,-0.07518467,1.0534959,"down","GAB2",9846,"0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from direct assay /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0016477 // cell migration // inferred from electronic annotation /// 0030316 // osteoclast differentiation // inferred from mutant phenotype /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043306 // positive regulation of mast cell degranulation // inferred from sequence or structural similarity /// 0048015 // phosphatidylinositol-mediated signaling // inferred from sequence or structural similarity","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0005068 // transmembrane receptor protein tyrosine kinase adaptor activity // inferred from direct assay /// 0005070 // SH3/SH2 adaptor activity // inferred from reviewed computational analysis /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0005547 // phosphatidylinositol-3,4,5-trisphosphate binding // inferred from sequence or structural similarity /// 0043325 // phosphatidylinositol-3,4-bisphosphate binding // inferred from sequence or structural similarity","chr11:77926043-78052926 (-) // 94.05 // q14.1"]
["11735760_a_at",-0.10683298,0.030441284,0.0015954971,-0.23826551,0.026207447,-0.0015954971,0.8555188,0.6473494,1.032603,0.04628573,1.032603,"up","POPDC2",64091,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:119360905-119379438 (-) // 87.49 // q13.33"]
["11721297_at",0.07505274,0.021071434,0.09333038,-0.021071434,-0.124904156,-0.03969574,0.2045166,0.031761248,1.0905395,0.12504196,1.0905395,"up","ABRACL",58527,"","","","chr6:139349818-139364689 (+) // 88.25 // q24.1"]
["11761790_x_at",-0.36088824,-0.035117388,0.012972832,0.12228727,-0.012972832,0.1042366,0.49418983,0.18642047,-1.1477921,-0.19886135,1.1477921,"down","YME1L1",10730,"0006508 // proteolysis // inferred from electronic annotation /// 0006515 // misfolded or incompletely synthesized protein catabolic process // inferred from mutant phenotype /// 0006955 // immune response // non-traceable author statement /// 0006968 // cellular defense response // non-traceable author statement /// 0007005 // mitochondrion organization // inferred from mutant phenotype /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0030163 // protein catabolic process // inferred from electronic annotation /// 0031295 // T cell costimulation // traceable author statement /// 0045768 // positive regulation of anti-apoptosis // inferred from mutant phenotype /// 0050776 // regulation of immune response // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement","0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // non-traceable author statement /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042287 // MHC protein binding // non-traceable author statement /// 0042605 // peptide antigen binding // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:22564326-22933316 (+) // 91.02 // q11.2"]
["11719894_s_at",-0.5803313,-0.32490492,-0.20475674,0.22337437,0.31051445,0.20475674,0.09044705,0.0059327553,-1.5328461,-0.61621284,1.5328461,"down","FAM91A1 /// FAM91A2 /// LOC728855","157769 /// 57234 /// 728855","","","","chr8:124780678-124827688 (+) // 98.14 // q24.13"]
["11743656_a_at",0.09279919,0.013057709,-0.013057232,0.021846771,-0.06426144,-0.27626085,0.5345446,0.21879588,1.0997369,0.13715845,1.0997369,"up","HPGD",3248,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006693 // prostaglandin metabolic process // inferred from direct assay /// 0006693 // prostaglandin metabolic process // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0007565 // female pregnancy // inferred from direct assay /// 0007567 // parturition // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0019372 // lipoxygenase pathway // traceable author statement /// 0030728 // ovulation // inferred from sequence or structural similarity /// 0045786 // negative regulation of cell cycle // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070493 // thrombin receptor signaling pathway // inferred from sequence or structural similarity /// 0097070 // ductus arteriosus closure // inferred from sequence or structural similarity /// 0097070 // ductus arteriosus closure // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // non-traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from direct assay /// 0004957 // prostaglandin E receptor activity // inferred from direct assay /// 0016404 // 15-hydroxyprostaglandin dehydrogenase (NAD+) activity // inferred from direct assay /// 0016404 // 15-hydroxyprostaglandin dehydrogenase (NAD+) activity // inferred from electronic annotation /// 0016404 // 15-hydroxyprostaglandin dehydrogenase (NAD+) activity // non-traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // traceable author statement /// 0051287 // NAD binding // inferred from direct assay /// 0070403 // NAD+ binding // inferred from direct assay","chr4:175411281-175444049 (-) // 97.21 // q34.1"]
["11724666_at",-0.21752644,-0.13724709,-0.033906937,0.20290375,0.28140163,0.033906937,0.19407171,0.02864262,-1.2331066,-0.30229753,1.2331066,"down","ZC3H4",23211,"","","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:47567443-47615847 (-) // 93.73 // q13.32"]
["11717179_a_at",0.08792114,0.053041458,0.035360336,-0.035360336,-0.04808235,-0.04459858,0.06762155,0.0030959381,1.0728548,0.10145478,1.0728548,"up","EDC4",23644,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement","0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr16:67906925-67918406 (+) // 97.96 // q22.1"]
["11749430_a_at",-0.018763542,0.06234646,-0.047445297,0.018763542,-0.07028961,0.12525654,0.8873365,0.71263367,-1.0180894,-0.025864271,1.0180894,"down","LOC100506538 /// NDUFAF6","100506538 /// 137682","0009058 // biosynthetic process // inferred from electronic annotation /// 0032981 // mitochondrial respiratory chain complex I assembly // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0016740 // transferase activity // inferred from electronic annotation","chr8:96037260-96089041 (+) // 80.14 // q22.1"]
["AFFX-r2-TagE_at",0.13514113,0.025438309,-0.02499628,-0.20718694,-0.08816004,0.02499652,0.4782565,0.17435935,1.0983297,0.13531114,1.0983297,"up",-0.20718694,-0.08816004,0.02499652,0.13514113,0.025438309,-0.02499628]
["11737626_a_at",0.06852293,-0.07244873,-0.08318615,0.14081526,-0.049322605,0.049323082,0.67097914,0.35972023,-1.0540738,-0.075975895,1.0540738,"down","SETD4",54093,"","","","chr21:37406839-37432919 (-) // 89.41 // q22.12"]
["11751495_x_at",-0.048142433,0.012047768,-0.012047768,0.15758514,0.16124058,-0.037029266,0.48558497,0.18001887,-1.079213,-0.10997966,1.079213,"down","YAF2",10138,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003713 // transcription coactivator activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:42553703-42632089 (-) // 91.52 // q12"]
["11744260_a_at",0.14651012,-0.046847343,-0.060853958,0.20155716,0.046847343,-0.14791298,0.95521975,0.8735638,-1.0143538,-0.020560874,1.0143538,"down","CD63",967,"0002576 // platelet degranulation // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010633 // negative regulation of epithelial cell migration // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030855 // epithelial cell differentiation // inferred from electronic annotation /// 0045785 // positive regulation of cell adhesion // inferred from electronic annotation /// 0045807 // positive regulation of endocytosis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005765 // lysosomal membrane // traceable author statement /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0010008 // endosome membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031088 // platelet dense granule membrane // traceable author statement /// 0031902 // late endosome membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0032403 // protein complex binding // inferred from electronic annotation","chr12:56119229-56123004 (-) // 87.23 // q13.2"]
["11737338_a_at",-0.30197334,-0.1825242,-0.10159731,0.10159731,0.22453451,0.13003397,0.10032141,0.007325829,-1.2722836,-0.34742025,1.2722836,"down","ZNF527",84503,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:37861947-37883968 (+) // 73.95 // q13.12"]
["11723440_a_at",0.028594494,0.0019373894,-0.0052375793,-0.0019373894,0.08049011,-0.025221348,0.9235288,0.795158,-1.0064989,-0.009345642,1.0064989,"down","EPHA4",2043,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // inferred from electronic annotation /// 0007628 // adult walking behavior // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from sequence or structural similarity /// 0008045 // motor axon guidance // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0021957 // corticospinal tract morphogenesis // inferred from sequence or structural similarity /// 0021957 // corticospinal tract morphogenesis // inferred from electronic annotation /// 0032314 // regulation of Rac GTPase activity // inferred from sequence or structural similarity /// 0032314 // regulation of Rac GTPase activity // inferred from electronic annotation /// 0032317 // regulation of Rap GTPase activity // inferred from sequence or structural similarity /// 0032317 // regulation of Rap GTPase activity // inferred from electronic annotation /// 0043507 // positive regulation of JUN kinase activity // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048013 // ephrin receptor signaling pathway // inferred from electronic annotation /// 0048681 // negative regulation of axon regeneration // inferred from sequence or structural similarity /// 0048681 // negative regulation of axon regeneration // inferred from electronic annotation /// 0048710 // regulation of astrocyte differentiation // inferred from sequence or structural similarity /// 0048710 // regulation of astrocyte differentiation // inferred from electronic annotation /// 0050770 // regulation of axonogenesis // inferred from sequence or structural similarity /// 0050770 // regulation of axonogenesis // inferred from electronic annotation /// 0061001 // regulation of dendritic spine morphogenesis // inferred from sequence or structural similarity /// 0061001 // regulation of dendritic spine morphogenesis // inferred from electronic annotation /// 0097155 // fasciculation of sensory neuron axon // inferred from sequence or structural similarity /// 0097155 // fasciculation of sensory neuron axon // inferred from electronic annotation /// 0097156 // fasciculation of motor neuron axon // inferred from sequence or structural similarity /// 0097156 // fasciculation of motor neuron axon // inferred from electronic annotation /// 2001108 // positive regulation of Rho guanyl-nucleotide exchange factor activity // inferred from direct assay","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from sequence or structural similarity /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030424 // axon // inferred from sequence or structural similarity /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from sequence or structural similarity /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005003 // ephrin receptor activity // inferred from electronic annotation /// 0005004 // GPI-linked ephrin receptor activity // inferred from sequence or structural similarity /// 0005004 // GPI-linked ephrin receptor activity // inferred from electronic annotation /// 0005005 // transmembrane-ephrin receptor activity // inferred from sequence or structural similarity /// 0005005 // transmembrane-ephrin receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0042731 // PH domain binding // inferred from physical interaction /// 0046875 // ephrin receptor binding // inferred from electronic annotation /// 0097161 // DH domain binding // inferred from direct assay","chr2:222282754-222438922 (-) // 98.45 // q36.1"]
["11723185_s_at",-0.23868465,0.10382557,0.20491982,-0.12651348,0.061375618,-0.061375618,0.8696154,0.6749551,1.0464655,0.06552477,1.0464655,"up","CNOT6L",246175,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004518 // nuclease activity // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0004535 // poly(A)-specific ribonuclease activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:78634540-78740548 (-) // 98.26 // q21.1"]
["11757701_s_at",0.2921133,-0.049143314,0.016201973,0.019471645,-0.016201973,-0.4304142,0.5880805,0.2687124,1.1718372,0.22877216,1.1718372,"up","VAMP4",8674,"0016192 // vesicle-mediated transport // inferred from electronic annotation","0000139 // Golgi membrane // traceable author statement /// 0005764 // lysosome // traceable author statement /// 0005768 // endosome // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:171672905-171673480 (-) // 94.96 // q24.3"]
["11733821_a_at",-0.23465347,0.07894659,-0.073078156,-0.047083378,0.17388487,0.047083378,0.61269635,0.29274717,-1.0975018,-0.13422324,1.0975018,"down","CHRNA2",1135,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // non-traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from direct assay /// 0007268 // synaptic transmission // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005892 // acetylcholine-gated channel complex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004889 // acetylcholine-activated cation-selective channel activity // inferred from direct assay /// 0004889 // acetylcholine-activated cation-selective channel activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0015464 // acetylcholine receptor activity // inferred from direct assay","chr8:27317278-27336813 (-) // 96.06 // p21.2"]
["11761295_a_at",0.01628828,-0.13830805,0.07744408,-0.01628828,-0.08908844,0.1113472,0.9483642,0.8557261,-1.0117471,-0.016848745,1.0117471,"down","LDB2",9079,"0001942 // hair follicle development // inferred from electronic annotation /// 0010669 // epithelial structure maintenance // inferred from electronic annotation /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0044089 // positive regulation of cellular component biogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation","0000989 // transcription factor binding transcription factor activity // inferred from electronic annotation /// 0003712 // transcription cofactor activity // inferred from electronic annotation /// 0003712 // transcription cofactor activity // traceable author statement /// 0019899 // enzyme binding // inferred from electronic annotation /// 0030274 // LIM domain binding // inferred from sequence or structural similarity /// 0030274 // LIM domain binding // inferred from electronic annotation","chr4:16504416-16675936 (-) // 99.91 // p15.32"]
["11726014_at",-0.050061226,0.012459755,-0.16829872,-0.012459755,0.061594963,0.09363794,0.41890362,0.13230358,-1.0838946,-0.11622448,1.0838946,"down","GPC6",10082,"","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation","0043395 // heparan sulfate proteoglycan binding // inferred from electronic annotation","chr13:93879087-95060271 (+) // 99.41 // q31.3"]
["11724219_x_at",-0.0037090778,0.33723855,0.0037090778,-0.055749178,-0.024564743,0.085072756,0.70874506,0.40894556,1.0798467,0.11082657,1.0798467,"up","GSTA1",2938,"0006749 // glutathione metabolic process // inferred from direct assay /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0008152 // metabolic process // inferred by curator /// 0008152 // metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004364 // glutathione transferase activity // inferred from direct assay /// 0004364 // glutathione transferase activity // non-traceable author statement /// 0004364 // glutathione transferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr6:52656178-52668765 (-) // 97.98 // p12.2"]
["11759711_a_at",-0.08353901,0.0015101433,-0.0015101433,0.038740158,-0.023247719,0.005979061,0.66438264,0.35013518,-1.0245593,-0.03500343,1.0245593,"down","RBM25",58517,"0000381 // regulation of alternative nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from direct assay /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr14:73525254-73581044 (+) // 90.46 // q24.2"]
["11750753_a_at",-0.025559664,0.10624027,0.025559425,-0.082951546,-0.10315895,0.14934683,0.84284234,0.62303275,1.0335928,0.047667954,1.0335928,"up","PRKCQ",5588,"0001558 // regulation of cell growth // non-traceable author statement /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006509 // membrane protein ectodomain proteolysis // inferred from sequence or structural similarity /// 0006509 // membrane protein ectodomain proteolysis // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0009408 // response to heat // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0010389 // regulation of G2/M transition of mitotic cell cycle // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019229 // regulation of vasoconstriction // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0032740 // positive regulation of interleukin-17 production // inferred from sequence or structural similarity /// 0032740 // positive regulation of interleukin-17 production // inferred from electronic annotation /// 0032753 // positive regulation of interleukin-4 production // inferred from sequence or structural similarity /// 0032753 // positive regulation of interleukin-4 production // inferred from electronic annotation /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0035556 // intracellular signal transduction // non-traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042102 // positive regulation of T cell proliferation // inferred from electronic annotation /// 0042246 // tissue regeneration // inferred from electronic annotation /// 0042346 // positive regulation of NF-kappaB import into nucleus // inferred from electronic annotation /// 0045086 // positive regulation of interleukin-2 biosynthetic process // inferred from electronic annotation /// 0045730 // respiratory burst // inferred from electronic annotation /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from mutant phenotype /// 0050714 // positive regulation of protein secretion // inferred from electronic annotation /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0050870 // positive regulation of T cell activation // inferred from sequence or structural similarity /// 0050870 // positive regulation of T cell activation // inferred from electronic annotation /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from electronic annotation /// 0051491 // positive regulation of filopodium assembly // inferred from electronic annotation /// 0051496 // positive regulation of stress fiber assembly // inferred from electronic annotation /// 0070233 // negative regulation of T cell apoptotic process // inferred from mutant phenotype /// 0090330 // regulation of platelet aggregation // inferred from sequence or structural similarity /// 0090330 // regulation of platelet aggregation // inferred from electronic annotation /// 2000318 // positive regulation of T-helper 17 type immune response // inferred from sequence or structural similarity /// 2000318 // positive regulation of T-helper 17 type immune response // inferred from electronic annotation /// 2000570 // positive regulation of T-helper 2 cell activation // inferred from sequence or structural similarity /// 2000570 // positive regulation of T-helper 2 cell activation // inferred from electronic annotation","0001772 // immunological synapse // inferred from electronic annotation /// 0005622 // intracellular // non-traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // non-traceable author statement /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004697 // protein kinase C activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:6469982-6622201 (-) // 100.0 // p15.1"]
["11742607_at",-0.03012085,-0.23085427,0.03012085,-0.13046074,0.07411194,0.13173056,0.7118199,0.41377893,-1.0733188,-0.102078706,1.0733188,"down","OR4S2",219431,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:55418379-55419315 (+) // 100.0 // q11"]
["11720826_s_at",0.21469498,-0.020576,0.3057766,-0.2740407,0.020576,-0.19577026,0.31101063,0.073456086,1.2451994,0.31637684,1.2451994,"up","JAG1",182,"0001525 // angiogenesis // non-traceable author statement /// 0001709 // cell fate determination // non-traceable author statement /// 0002011 // morphogenesis of an epithelial sheet // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from mutant phenotype /// 0007219 // Notch signaling pathway // non-traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007220 // Notch receptor processing // traceable author statement /// 0007275 // multicellular organismal development // non-traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // non-traceable author statement /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0030097 // hemopoiesis // non-traceable author statement /// 0030216 // keratinocyte differentiation // non-traceable author statement /// 0030334 // regulation of cell migration // non-traceable author statement /// 0032495 // response to muramyl dipeptide // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // non-traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042491 // auditory receptor cell differentiation // inferred from electronic annotation /// 0045445 // myoblast differentiation // non-traceable author statement /// 0045446 // endothelial cell differentiation // non-traceable author statement /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045599 // negative regulation of fat cell differentiation // inferred from electronic annotation /// 0045639 // positive regulation of myeloid cell differentiation // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045747 // positive regulation of Notch signaling pathway // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0072017 // distal tubule development // inferred from electronic annotation /// 0072070 // loop of Henle development // inferred from electronic annotation /// 0097150 // neuronal stem cell maintenance // inferred from expression pattern /// 2000737 // negative regulation of stem cell differentiation // inferred from mutant phenotype","0005576 // extracellular region // non-traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation","0005112 // Notch binding // non-traceable author statement /// 0005112 // Notch binding // inferred from electronic annotation /// 0005198 // structural molecule activity // non-traceable author statement /// 0005509 // calcium ion binding // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008083 // growth factor activity // non-traceable author statement","chr20:10618333-10654755 (-) // 96.82 // p12.2"]
["11734961_a_at",-0.33612776,0.14912128,0.12418556,0.020785332,-0.06356382,-0.020785332,0.999403,0.99883646,1.0001717,0.00024763375,1.0001717,"up","SYNJ2",8871,"0007420 // brain development // inferred from electronic annotation /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation /// 0046855 // inositol phosphate dephosphorylation // inferred from electronic annotation /// 0046856 // phosphatidylinositol dephosphorylation // inferred from electronic annotation /// 0048312 // intracellular distribution of mitochondria // inferred from electronic annotation","0005626 // insoluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031315 // extrinsic to mitochondrial outer membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0043679 // axon terminus // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004439 // phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity // inferred from electronic annotation /// 0004445 // inositol-polyphosphate 5-phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from electronic annotation /// 0042578 // phosphoric ester hydrolase activity // inferred from electronic annotation","chr6:158402887-158520204 (+) // 99.72 // q25.3"]
["11738966_at",-0.01841259,0.13886356,0.1397934,-0.14899349,0.01841259,-0.07386637,0.3562399,0.09610828,1.1133423,0.1548972,1.1133423,"up","KRTAP25-1",100131902,"","0005882 // intermediate filament // inferred from electronic annotation","","chr21:31661462-31661832 (-) // 100.0 // q22.11"]
["11747550_a_at",-0.19421673,-0.08315086,-0.24911642,0.31392002,0.08315039,0.12996864,0.14061089,0.014876658,-1.2755985,-0.35117432,1.2755985,"down","RBM23",55147,"0006397 // mRNA processing // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr14:23370544-23388385 (-) // 97.32 // q11.2"]
["11761700_a_at",-0.21137619,0.15764952,-0.009002209,0.009002209,-0.020219803,0.123221874,0.85173565,0.6400734,-1.041198,-0.058244467,1.041198,"down","RANBP10",57610,"0000226 // microtubule cytoskeleton organization // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation","0005087 // Ran guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0008536 // Ran GTPase binding // inferred from electronic annotation /// 0048487 // beta-tubulin binding // inferred from electronic annotation","chr16:67764801-67840460 (-) // 100.0 // q22.1"]
["11758480_s_at",-0.0014677048,-0.024105072,0.0014677048,0.09135437,0.018708229,-0.03148079,0.7038949,0.40215847,-1.0240093,-0.034228884,1.0240093,"down","COG8 /// PDF","64146 /// 84342","0006412 // translation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0018206 // peptidyl-methionine modification // inferred from direct assay /// 0031365 // N-terminal protein amino acid modification // inferred from direct assay","0000139 // Golgi membrane // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0017119 // Golgi transport complex // inferred from direct assay /// 0017119 // Golgi transport complex // non-traceable author statement","0005506 // iron ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042586 // peptide deformylase activity // inferred from direct assay /// 0042586 // peptide deformylase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:69362523-69362986 (-) // 99.14 // q22.1"]
["11750991_s_at",0.30376673,0.0639267,-0.0639267,0.2610364,-0.22692966,-0.11656809,0.7842075,0.52024895,1.0933404,0.12874264,1.0933404,"up","UBQLN4",56893,"0032434 // regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from sequence or structural similarity /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation /// 0031595 // nuclear proteasome complex // inferred from direct assay /// 0031597 // cytosolic proteasome complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0031593 // polyubiquitin binding // inferred from direct assay","chr1:156006753-156023505 (-) // 97.52 // q22 /// chr3:148703632-148705466 (-) // 96.17 // q24"]
["11722807_a_at",0.181324,0.0094947815,0.05301094,-0.15892124,-0.0094947815,-0.120708466,0.28129777,0.060052615,1.1310412,0.17765144,1.1310412,"up","WDR54",84058,"","","","chr2:74648856-74652882 (+) // 90.46 // p13.1"]
["11720615_a_at",0.1416502,-0.0048236847,0.0048236847,0.20886517,-0.09382057,-0.16405106,0.8492946,0.63476855,1.0450357,0.06355225,1.0450357,"up","TUBG2",27175,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0007017 // microtubule-based process // inferred from electronic annotation /// 0051258 // protein polymerization // inferred from electronic annotation","0000242 // pericentriolar material // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation /// 0005876 // spindle microtubule // inferred from electronic annotation /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // traceable author statement /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005198 // structural molecule activity // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation","chr17:40811265-40819024 (+) // 93.62 // q21.2"]
["11753838_x_at",0.03838539,0.016161442,0.0059080124,-0.0059080124,-0.049540043,-0.007666111,0.31386834,0.07457987,1.028962,0.041189726,1.028962,"up","SNN",8303,"0006950 // response to stress // traceable author statement /// 0009628 // response to abiotic stimulus // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr16:11769915-11770179 (+) // 99.24 // p13.13"]
["11758330_x_at",-0.14620495,-0.14630222,-0.067061424,0.15016556,0.067061424,0.1769886,0.07619024,0.0040385164,-1.1902473,-0.25126135,1.1902473,"down","SDHD",6392,"0006099 // tricarboxylic acid cycle // inferred from direct assay /// 0006099 // tricarboxylic acid cycle // inferred from electronic annotation /// 0006099 // tricarboxylic acid cycle // traceable author statement /// 0006121 // mitochondrial electron transport, succinate to ubiquinone // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005740 // mitochondrial envelope // traceable author statement /// 0005740 // mitochondrial envelope // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from sequence or structural similarity /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005749 // mitochondrial respiratory chain complex II // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000104 // succinate dehydrogenase activity // inferred from direct assay /// 0005506 // iron ion binding // inferred from electronic annotation /// 0009055 // electron carrier activity // traceable author statement /// 0020037 // heme binding // inferred from sequence or structural similarity /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048039 // ubiquinone binding // inferred from sequence or structural similarity","chr11:111959600-111966003 (+) // 85.6 // q23.1"]
["11733749_s_at",0.01865077,-0.052391052,0,-0.01865077,0.052391052,0,0.76902616,0.49606293,-1.0157135,-0.022493456,1.0157135,"down","TNNI2",7136,"0003009 // skeletal muscle contraction // inferred from direct assay /// 0030049 // muscle filament sliding // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005861 // troponin complex // inferred from direct assay","0003779 // actin binding // inferred from direct assay /// 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031014 // troponin T binding // inferred from physical interaction","chr11:1861630-1862910 (+) // 86.25 // p15.5"]
["11763665_at",-0.043598652,0.023452759,-0.023452759,-0.25828505,0.05436802,0.21447706,0.96540606,0.903783,-1.012592,-0.018052932,1.012592,"down","CA6",765,"0006730 // one-carbon metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0004089 // carbonate dehydratase activity // inferred from electronic annotation /// 0004089 // carbonate dehydratase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:8994479-9023668 (+) // 39.01 // p36.23"]
["11717465_s_at",0.107084036,0.025247335,-0.025247335,-0.043256998,-0.04200363,0.027993917,0.6119343,0.2919811,1.0387033,0.054783646,1.0387033,"up","LXN",56925,"0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0050965 // detection of temperature stimulus involved in sensory perception of pain // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0004857 // enzyme inhibitor activity // inferred from electronic annotation /// 0008191 // metalloendopeptidase inhibitor activity // inferred from electronic annotation","chr3:158383817-158390482 (-) // 96.82 // q25.32"]
["11763698_x_at",0.11445618,-0.1015358,-0.064575195,0.08313465,0.048452377,-0.048452377,0.8268305,0.5929574,-1.031633,-0.044929855,1.031633,"down","MBIP",51562,"0000173 // inactivation of MAPK activity involved in osmosensory signaling pathway // traceable author statement /// 0043966 // histone H3 acetylation // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005671 // Ada2/Gcn5/Ada3 transcription activator complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0004860 // protein kinase inhibitor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction","chr14:36767769-36789794 (-) // 92.22 // q13.3"]
["11754552_a_at",0.057541847,-0.016350746,-0.09604263,0.08464527,0.016350746,-0.035289764,0.78133744,0.51500726,-1.0282463,-0.040185858,1.0282463,"down","MRPL27",51264,"0006412 // translation // non-traceable author statement /// 0006412 // translation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005762 // mitochondrial large ribosomal subunit // non-traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation","chr17:48445227-48450571 (-) // 79.52 // q21.33"]
["11731748_a_at",0.0066199303,0.13602686,-0.05841589,-0.2173438,-0.0066199303,0.31231165,0.997648,0.99373263,-1.0009516,-0.0013722846,1.0009516,"down","HEPACAM /// HEPN1","220296 /// 641654","0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0040008 // regulation of growth // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from direct assay","","chr11:124789088-124806308 (-) // 93.52 // q24.2"]
["11749264_a_at",0.016900301,0.049437284,-0.016900301,-0.06216359,-0.018516064,0.45602107,0.8027534,0.55091685,-1.0782074,-0.10863468,1.0782074,"down","DDX25",29118,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // inferred from sequence or structural similarity /// 0006406 // mRNA export from nucleus // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from sequence or structural similarity /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007286 // spermatid development // inferred from sequence or structural similarity /// 0007286 // spermatid development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0033391 // chromatoid body // inferred from sequence or structural similarity /// 0033391 // chromatoid body // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003724 // RNA helicase activity // inferred from electronic annotation /// 0004004 // ATP-dependent RNA helicase activity // inferred from sequence or structural similarity /// 0004004 // ATP-dependent RNA helicase activity // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation","chr11:125774403-125791355 (+) // 99.53 // q24.2"]
["11719912_a_at",0.23985004,-0.19532299,-0.11201668,0.46820068,0.028028488,-0.028028488,0.7270318,0.43478483,-1.1317564,-0.17856349,1.1317564,"down","KDM1B",221656,"0006349 // regulation of gene expression by genetic imprinting // inferred from electronic annotation /// 0006349 // regulation of gene expression by genetic imprinting // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0034720 // histone H3-K4 demethylation // inferred from sequence or structural similarity /// 0034720 // histone H3-K4 demethylation // inferred from electronic annotation /// 0043046 // DNA methylation involved in gamete generation // inferred from electronic annotation /// 0044030 // regulation of DNA methylation // inferred from electronic annotation /// 0044030 // regulation of DNA methylation // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity","0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0034648 // histone demethylase activity (H3-dimethyl-K4 specific) // inferred from electronic annotation /// 0034648 // histone demethylase activity (H3-dimethyl-K4 specific) // inferred from sequence or structural similarity /// 0034649 // histone demethylase activity (H3-monomethyl-K4 specific) // inferred from electronic annotation /// 0034649 // histone demethylase activity (H3-monomethyl-K4 specific) // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation","chr6:18155618-18224085 (+) // 97.56 // p22.3"]
["11723350_a_at",0.2386055,-0.03877735,-0.2005868,0.5552921,0.03877735,-0.05571413,0.75565225,0.47672203,-1.132652,-0.17970473,1.132652,"down","ABCA3",21,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0042493 // response to drug // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0097208 // alveolar lamellar body // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005215 // transporter activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // traceable author statement /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // traceable author statement","chr16:2325877-2390747 (-) // 97.64 // p13.3"]
["11717548_a_at",-0.017603874,0.115190506,0.059685707,-0.028003693,-0.07085037,0.017603874,0.45929003,0.16041073,1.0566573,0.07950757,1.0566573,"up","BTBD10",84280,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","","chr11:13409568-13484838 (-) // 95.12 // p15.2"]
["11717700_at",-0.12482166,0.029457092,-0.07672882,0.20998764,-0.029456615,0.13810253,0.4058455,0.12437512,-1.1200597,-0.16357566,1.1200597,"down","DCAF8",50717,"0016567 // protein ubiquitination // inferred by curator /// 0016567 // protein ubiquitination // inferred from electronic annotation","0005777 // peroxisome // inferred from electronic annotation /// 0080008 // CUL4-RING ubiquitin ligase complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr1:160185156-160232258 (-) // 94.8 // q23.2"]
["11757070_x_at",-0.019444466,-0.1579876,-0.17284584,0.34148502,0.0779686,0.019444466,0.3159687,0.075820975,-1.2000202,-0.2630587,1.2000202,"down","LLPH /// LOC100506562","100506562 /// 84298","","","","chr2:222808882-222809530 (+) // 96.23 // q36.1 /// chr22:42072546-42073161 (-) // 90.95 // q13.2"]
["11725822_a_at",-0.12232113,-0.09093952,-0.13992596,0.22819138,0.22704983,0.09093952,0.06911083,0.0032888516,-1.2309644,-0.29978907,1.2309644,"down","JPH1",56704,"0007517 // muscle organ development // inferred from electronic annotation /// 0060314 // regulation of ryanodine-sensitive calcium-release channel activity // traceable author statement /// 0060402 // calcium ion transport into cytosol // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014701 // junctional sarcoplasmic reticulum membrane // traceable author statement /// 0014701 // junctional sarcoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016529 // sarcoplasmic reticulum // inferred from electronic annotation /// 0030018 // Z disc // inferred from electronic annotation /// 0030314 // junctional membrane complex // non-traceable author statement /// 0030314 // junctional membrane complex // inferred from electronic annotation /// 0033017 // sarcoplasmic reticulum membrane // inferred from electronic annotation","0008307 // structural constituent of muscle // inferred from electronic annotation","chr8:75146934-75233678 (-) // 98.24 // q21.11"]
["11735455_at",-0.01998043,0.33845806,0.22006845,-0.31902695,0.01998043,-0.18928528,0.31834435,0.07687441,1.2677696,0.34229255,1.2677696,"up","IFT81",28981,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from sequence or structural similarity /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0009434 // microtubule-based flagellum // inferred from sequence or structural similarity /// 0030992 // intraflagellar transport particle B // inferred from sequence or structural similarity","","chr12:110562139-110606985 (+) // 64.85 // q24.11"]
["11727708_a_at",-0.15602446,-0.005384922,0.048948526,-0.12312007,0.0053846836,0.3175447,0.77876145,0.51113707,-1.0748162,-0.104090005,1.0748162,"down","C6orf201",404220,"0006508 // proteolysis // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0004190 // aspartic-type endopeptidase activity // inferred from electronic annotation","chr6:4079439-4131185 (+) // 93.21 // p25.2"]
["11747470_a_at",0.4248619,0.0027151108,-0.08916569,0.2357111,-0.038908005,-0.0027151108,0.92645484,0.8026837,1.033908,0.04810783,1.033908,"up","ZNF512",84450,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:27805872-27845958 (+) // 96.61 // p23.3"]
["11731880_at",0.3183298,0.15030003,0.13949156,-0.13949156,-0.30700493,-0.32831955,0.08508255,0.0051812595,1.3764757,0.46097913,1.3764757,"up","NLRP1",22861,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006917 // induction of apoptosis // non-traceable author statement /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // non-traceable author statement /// 0006952 // defense response // inferred from electronic annotation /// 0032495 // response to muramyl dipeptide // inferred from sequence or structural similarity /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0042742 // defense response to bacterium // inferred from sequence or structural similarity /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0050718 // positive regulation of interleukin-1 beta secretion // inferred from sequence or structural similarity /// 0050727 // regulation of inflammatory response // inferred by curator /// 0051402 // neuron apoptotic process // inferred from direct assay","0005622 // intracellular // inferred by curator /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0072558 // NLRP1 inflammasome complex // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0008656 // cysteine-type endopeptidase activator activity involved in apoptotic process // non-traceable author statement /// 0019899 // enzyme binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction","chr17:5404340-5487832 (-) // 94.94 // p13.2"]
["11758111_s_at",0.055887222,0.03629589,-0.109612465,0.1497097,-0.055337906,-0.03629589,0.9164501,0.7785976,-1.0175985,-0.025168464,1.0175985,"down","FOXC1",2296,"0001501 // skeletal system development // inferred from electronic annotation /// 0001503 // ossification // not recorded /// 0001503 // ossification // inferred from electronic annotation /// 0001541 // ovarian follicle development // not recorded /// 0001541 // ovarian follicle development // inferred from electronic annotation /// 0001568 // blood vessel development // inferred from electronic annotation /// 0001570 // vasculogenesis // not recorded /// 0001654 // eye development // inferred from direct assay /// 0001654 // eye development // inferred from electronic annotation /// 0001656 // metanephros development // not recorded /// 0001657 // ureteric bud development // not recorded /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001756 // somitogenesis // not recorded /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001945 // lymph vessel development // inferred from electronic annotation /// 0001946 // lymphangiogenesis // not recorded /// 0001974 // blood vessel remodeling // not recorded /// 0001974 // blood vessel remodeling // inferred from electronic annotation /// 0003007 // heart morphogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006916 // anti-apoptosis // not recorded /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0007219 // Notch signaling pathway // not recorded /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007420 // brain development // not recorded /// 0007420 // brain development // inferred from electronic annotation /// 0007507 // heart development // inferred from direct assay /// 0007507 // heart development // inferred from electronic annotation /// 0008354 // germ cell migration // not recorded /// 0008354 // germ cell migration // inferred from electronic annotation /// 0014032 // neural crest cell development // inferred from electronic annotation /// 0014034 // neural crest cell fate commitment // not recorded /// 0030199 // collagen fibril organization // not recorded /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0030203 // glycosaminoglycan metabolic process // not recorded /// 0030203 // glycosaminoglycan metabolic process // inferred from electronic annotation /// 0032808 // lacrimal gland development // not recorded /// 0032808 // lacrimal gland development // inferred from electronic annotation /// 0035050 // embryonic heart tube development // not recorded /// 0035050 // embryonic heart tube development // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from mutant phenotype /// 0043010 // camera-type eye development // not recorded /// 0043010 // camera-type eye development // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement /// 0045930 // negative regulation of mitotic cell cycle // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // not recorded /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046620 // regulation of organ growth // not recorded /// 0046620 // regulation of organ growth // inferred from electronic annotation /// 0048010 // vascular endothelial growth factor receptor signaling pathway // not recorded /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from electronic annotation /// 0048341 // paraxial mesoderm formation // inferred from electronic annotation /// 0048343 // paraxial mesodermal cell fate commitment // not recorded /// 0048762 // mesenchymal cell differentiation // inferred from electronic annotation /// 0048844 // artery morphogenesis // not recorded /// 0048844 // artery morphogenesis // inferred from electronic annotation /// 0050880 // regulation of blood vessel size // not recorded /// 0050880 // regulation of blood vessel size // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // not recorded /// 0055010 // ventricular cardiac muscle tissue morphogenesis // not recorded /// 0055010 // ventricular cardiac muscle tissue morphogenesis // inferred from electronic annotation /// 0060038 // cardiac muscle cell proliferation // not recorded /// 0060038 // cardiac muscle cell proliferation // inferred from electronic annotation","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // not recorded /// 0005720 // nuclear heterochromatin // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // not recorded /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008301 // DNA binding, bending // inferred from direct assay /// 0031490 // chromatin DNA binding // not recorded /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from sequence or structural similarity /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation","chr6:1613226-1614127 (+) // 99.34 // p25.3"]
["11755725_a_at",-0.14629102,-0.3630793,0.124970436,-0.027994633,0.027994633,0.03473282,0.6890104,0.38260645,-1.1016843,-0.1397109,1.1016843,"down","KIR3DX1",90011,"","0005576 // extracellular region // inferred from electronic annotation","","chr19:55043908-55055024 (+) // 98.55 // q13.42"]
["11732710_a_at",-0.24793124,0.17188144,-0.03357911,-0.041231155,0.03357911,0.30025172,0.7369759,0.44779107,-1.0973899,-0.13407625,1.0973899,"down","FAM46D",169966,"","","","chrX:79675945-79700808 (+) // 98.54 // q21.1"]
["11763995_at",0.09543705,0.0007638931,-0.109083176,0.045700073,-0.2901764,-0.0007638931,0.8054145,0.5555326,1.0551534,0.07745271,1.0551534,"up","","","","","","chr22:30882823-30883513 (-) // 68.82 // q12.2"]
["11721715_s_at",0.027555466,-0.027555466,0.22681904,0.07177544,-0.14095688,-0.044095993,0.6330574,0.31493673,1.0817487,0.11336542,1.0817487,"up","ATRX",546,"0006281 // DNA repair // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006306 // DNA methylation // traceable author statement /// 0006310 // DNA recombination // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // traceable author statement","0000228 // nuclear chromosome // inferred from electronic annotation /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005720 // nuclear heterochromatin // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003678 // DNA helicase activity // traceable author statement /// 0003682 // chromatin binding // inferred from electronic annotation /// 0004386 // helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070087 // chromo shadow domain binding // inferred from physical interaction","chrX:76760357-77041755 (-) // 97.35 // q21.1"]
["11762770_at",-0.04671955,-0.039268494,-0.06825161,0.1282692,0.039268494,0.18783283,0.15472329,0.018180756,-1.1249572,-0.16987012,1.1249572,"down","RAPGEF1",2889,"0000186 // activation of MAPKK activity // traceable author statement /// 0001568 // blood vessel development // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005768 // endosome // traceable author statement /// 0005829 // cytosol // traceable author statement","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation","chr9:134551623-134553049 (-) // 76.44 // q34.13"]
["11717406_a_at",0.06406021,0.01952076,0.14808273,-0.5083518,-0.0760231,-0.01952076,0.45155743,0.1545598,1.2129498,0.27851978,1.2129498,"up","FAM120AOS",158293,"","","","chr9:96208554-96215874 (-) // 86.74 // q22.31"]
["11720648_a_at",0.12622929,0.27435398,0.2339449,-0.29467297,-0.12622929,-0.16799259,0.07364392,0.0037287874,1.3266683,0.40780765,1.3266683,"up","IP6K2",51447,"0016310 // phosphorylation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0046854 // phosphatidylinositol phosphorylation // inferred from direct assay /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0000832 // inositol hexakisphosphate 5-kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008440 // inositol-1,4,5-trisphosphate 3-kinase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0052723 // inositol hexakisphosphate 1-kinase activity // inferred from electronic annotation /// 0052724 // inositol hexakisphosphate 3-kinase activity // inferred from electronic annotation","chr3:48725435-48754711 (-) // 97.51 // p21.31"]
["11745913_s_at",0.47831678,-0.016998291,-0.07351112,0.100292206,-0.053766727,0.016998768,0.820343,0.5822329,1.0778036,0.10809433,1.0778036,"up","GOLGA8A /// GOLGA8B /// LOC100508892","100508892 /// 23015 /// 440270","0006810 // transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","","chr15:34671271-34846157 (-) // 85.47 // q14"]
["11747931_a_at",-0.071293354,0.17113638,-0.14723492,0.24143982,0.071293354,-0.27675247,0.95947474,0.88490397,-1.01945,-0.027790947,1.01945,"down","LEF1",51176,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001569 // patterning of blood vessels // not recorded /// 0001569 // patterning of blood vessels // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from expression pattern /// 0001755 // neural crest cell migration // not recorded /// 0001756 // somitogenesis // not recorded /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001837 // epithelial to mesenchymal transition // inferred from sequence or structural similarity /// 0001837 // epithelial to mesenchymal transition // inferred from electronic annotation /// 0001944 // vasculature development // inferred from electronic annotation /// 0002040 // sprouting angiogenesis // not recorded /// 0002040 // sprouting angiogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006917 // induction of apoptosis // not recorded /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007420 // brain development // not recorded /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0010226 // response to lithium ion // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from mutant phenotype /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from direct assay /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016202 // regulation of striated muscle tissue development // not recorded /// 0021542 // dentate gyrus development // not recorded /// 0021542 // dentate gyrus development // inferred from electronic annotation /// 0021766 // hippocampus development // inferred from electronic annotation /// 0021854 // hypothalamus development // not recorded /// 0021861 // forebrain radial glial cell differentiation // not recorded /// 0021861 // forebrain radial glial cell differentiation // inferred from electronic annotation /// 0021873 // forebrain neuroblast division // not recorded /// 0021873 // forebrain neuroblast division // inferred from electronic annotation /// 0021879 // forebrain neuron differentiation // not recorded /// 0021943 // formation of radial glial scaffolds // not recorded /// 0021943 // formation of radial glial scaffolds // inferred from electronic annotation /// 0022008 // neurogenesis // not recorded /// 0022407 // regulation of cell-cell adhesion // inferred from electronic annotation /// 0022408 // negative regulation of cell-cell adhesion // inferred from direct assay /// 0022409 // positive regulation of cell-cell adhesion // inferred from direct assay /// 0030111 // regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030223 // neutrophil differentiation // inferred from mutant phenotype /// 0030307 // positive regulation of cell growth // inferred from mutant phenotype /// 0030326 // embryonic limb morphogenesis // not recorded /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0030509 // BMP signaling pathway // not recorded /// 0030509 // BMP signaling pathway // inferred from electronic annotation /// 0030854 // positive regulation of granulocyte differentiation // inferred from direct assay /// 0030879 // mammary gland development // not recorded /// 0030879 // mammary gland development // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0032696 // negative regulation of interleukin-13 production // inferred from direct assay /// 0032713 // negative regulation of interleukin-4 production // inferred from direct assay /// 0032714 // negative regulation of interleukin-5 production // inferred from direct assay /// 0033153 // T cell receptor V(D)J recombination // inferred from electronic annotation /// 0042100 // B cell proliferation // not recorded /// 0042100 // B cell proliferation // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0043392 // negative regulation of DNA binding // inferred from direct assay /// 0043586 // tongue development // inferred from electronic annotation /// 0043588 // skin development // inferred from electronic annotation /// 0043923 // positive regulation by host of viral transcription // inferred from direct assay /// 0043966 // histone H3 acetylation // inferred from mutant phenotype /// 0043967 // histone H4 acetylation // inferred from mutant phenotype /// 0045063 // T-helper 1 cell differentiation // inferred from sequence or structural similarity /// 0045063 // T-helper 1 cell differentiation // inferred from electronic annotation /// 0045843 // negative regulation of striated muscle tissue development // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046632 // alpha-beta T cell differentiation // not recorded /// 0046632 // alpha-beta T cell differentiation // inferred from electronic annotation /// 0048069 // eye pigmentation // not recorded /// 0048341 // paraxial mesoderm formation // not recorded /// 0048341 // paraxial mesoderm formation // inferred from electronic annotation /// 0048468 // cell development // inferred from electronic annotation /// 0048699 // generation of neurons // not recorded /// 0048747 // muscle fiber development // not recorded /// 0050909 // sensory perception of taste // inferred from electronic annotation /// 0060021 // palate development // inferred from sequence or structural similarity /// 0060021 // palate development // inferred from electronic annotation /// 0060033 // anatomical structure regression // inferred from electronic annotation /// 0060070 // canonical Wnt receptor signaling pathway // inferred from direct assay /// 0060070 // canonical Wnt receptor signaling pathway // inferred from mutant phenotype /// 0060325 // face morphogenesis // not recorded /// 0060325 // face morphogenesis // inferred from electronic annotation /// 0060326 // cell chemotaxis // inferred from direct assay /// 0060561 // apoptotic process involved in morphogenesis // not recorded /// 0060561 // apoptotic process involved in morphogenesis // inferred from electronic annotation /// 0060710 // chorio-allantoic fusion // not recorded /// 0060710 // chorio-allantoic fusion // inferred from electronic annotation /// 0061153 // trachea gland development // not recorded /// 0061153 // trachea gland development // inferred from electronic annotation /// 0071353 // cellular response to interleukin-4 // inferred from direct assay /// 0071864 // positive regulation of cell proliferation in bone marrow // inferred from mutant phenotype /// 0071866 // negative regulation of apoptotic process in bone marrow // inferred from mutant phenotype /// 0071895 // odontoblast differentiation // not recorded /// 0071899 // negative regulation of estrogen receptor binding // inferred from direct assay /// 0090068 // positive regulation of cell cycle process // inferred from direct assay /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from mutant phenotype","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from direct assay /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0032993 // protein-DNA complex // inferred from direct assay","0003677 // DNA binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // not recorded /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from physical interaction /// 0008013 // beta-catenin binding // traceable author statement /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008301 // DNA binding, bending // inferred from sequence or structural similarity /// 0008301 // DNA binding, bending // inferred from electronic annotation /// 0030284 // estrogen receptor activity // inferred from direct assay /// 0030331 // estrogen receptor binding // inferred from direct assay /// 0035326 // enhancer binding // inferred from direct assay /// 0042393 // histone binding // inferred from physical interaction /// 0043027 // cysteine-type endopeptidase inhibitor activity involved in apoptotic process // inferred from mutant phenotype /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0045295 // gamma-catenin binding // inferred from physical interaction /// 0070016 // armadillo repeat domain binding // inferred from physical interaction /// 0070742 // C2H2 zinc finger domain binding // inferred from physical interaction","chr4:108969794-109088465 (-) // 98.51 // q25"]
["11744921_a_at",0.06691074,-0.02147293,0.054612637,0.02147293,-0.07836723,-0.17648268,0.45204172,0.15486284,1.0800833,0.111142516,1.0800833,"up","SLC43A1",8501,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006865 // amino acid transport // traceable author statement /// 0006865 // amino acid transport // inferred from electronic annotation /// 0015804 // neutral amino acid transport // inferred from direct assay /// 0015807 // L-amino acid transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0015175 // neutral amino acid transmembrane transporter activity // inferred from direct assay /// 0015179 // L-amino acid transmembrane transporter activity // inferred from electronic annotation","chr11:57252009-57282358 (-) // 98.91 // q12.1"]
["11737014_s_at",0.08265805,-0.15330696,-0.082657814,0.08326864,0.1901331,-0.16410398,0.78744674,0.5256978,-1.062553,-0.08753487,1.062553,"down","HOXD8",3234,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008595 // anterior/posterior axis specification, embryo // non-traceable author statement /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr2:176994467-176997422 (+) // 89.88 // q31.1"]
["11736052_at",-0.31270027,-0.08205891,-0.22682667,0.08205938,0.36556005,0.16414118,0.15775812,0.018884983,-1.3297136,-0.41111553,1.3297136,"down","EEF1A1 /// LOC100653236","100653236 /// 1915","0006184 // GTP catabolic process // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006414 // translational elongation // traceable author statement /// 0006414 // translational elongation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005853 // eukaryotic translation elongation factor 1 complex // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0003746 // translation elongation factor activity // traceable author statement /// 0003924 // GTPase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0005525 // GTP binding // traceable author statement /// 0019901 // protein kinase binding // inferred from physical interaction","chr6:74225472-74230794 (-) // 90.22 // q13"]
["11752095_a_at",0.2073729,-0.013496637,0.27179503,0.013496637,-0.04528594,-0.07284975,0.36828002,0.102392994,1.1408455,0.19010347,1.1408455,"up","PTPRC",5788,"0000187 // activation of MAPK activity // inferred from electronic annotation /// 0001915 // negative regulation of T cell mediated cytotoxicity // inferred from sequence or structural similarity /// 0001916 // positive regulation of T cell mediated cytotoxicity // inferred from electronic annotation /// 0001960 // negative regulation of cytokine-mediated signaling pathway // inferred from sequence or structural similarity /// 0002244 // hemopoietic progenitor cell differentiation // inferred from mutant phenotype /// 0002378 // immunoglobulin biosynthetic process // inferred from mutant phenotype /// 0002711 // positive regulation of T cell mediated immunity // inferred from electronic annotation /// 0002923 // regulation of humoral immune response mediated by circulating immunoglobulin // inferred from electronic annotation /// 0002925 // positive regulation of humoral immune response mediated by circulating immunoglobulin // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // inferred from direct assay /// 0006469 // negative regulation of protein kinase activity // inferred from sequence or structural similarity /// 0006470 // protein dephosphorylation // inferred from sequence or structural similarity /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006933 // negative regulation of cell adhesion involved in substrate-bound cell migration // inferred from mutant phenotype /// 0007159 // leukocyte cell-cell adhesion // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0010332 // response to gamma radiation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from sequence or structural similarity /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0030183 // B cell differentiation // inferred from electronic annotation /// 0030217 // T cell differentiation // inferred from sequence or structural similarity /// 0030890 // positive regulation of B cell proliferation // inferred from mutant phenotype /// 0030890 // positive regulation of B cell proliferation // inferred from electronic annotation /// 0031953 // negative regulation of protein autophosphorylation // inferred from electronic annotation /// 0033261 // regulation of S phase // inferred from mutant phenotype /// 0034113 // heterotypic cell-cell adhesion // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from direct assay /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0042098 // T cell proliferation // inferred from electronic annotation /// 0042100 // B cell proliferation // inferred from sequence or structural similarity /// 0042102 // positive regulation of T cell proliferation // inferred from sequence or structural similarity /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0045059 // positive thymic T cell selection // inferred from electronic annotation /// 0045060 // negative thymic T cell selection // inferred from electronic annotation /// 0045577 // regulation of B cell differentiation // inferred from electronic annotation /// 0045582 // positive regulation of T cell differentiation // inferred from electronic annotation /// 0045588 // positive regulation of gamma-delta T cell differentiation // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // non-traceable author statement /// 0046641 // positive regulation of alpha-beta T cell proliferation // inferred from electronic annotation /// 0048304 // positive regulation of isotype switching to IgG isotypes // inferred from electronic annotation /// 0048539 // bone marrow development // inferred from mutant phenotype /// 0048864 // stem cell development // inferred from mutant phenotype /// 0050732 // negative regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050852 // T cell receptor signaling pathway // inferred from direct assay /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0050852 // T cell receptor signaling pathway // inferred from electronic annotation /// 0050853 // B cell receptor signaling pathway // inferred from sequence or structural similarity /// 0050853 // B cell receptor signaling pathway // inferred from electronic annotation /// 0050855 // regulation of B cell receptor signaling pathway // inferred from electronic annotation /// 0050857 // positive regulation of antigen receptor-mediated signaling pathway // inferred from sequence or structural similarity /// 0051209 // release of sequestered calcium ion into cytosol // inferred from sequence or structural similarity /// 0051607 // defense response to virus // inferred from sequence or structural similarity /// 0051607 // defense response to virus // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from sequence or structural similarity /// 2000473 // positive regulation of hematopoietic stem cell migration // inferred from mutant phenotype /// 2000648 // positive regulation of stem cell proliferation // inferred from mutant phenotype","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from sequence or structural similarity /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0005925 // focal adhesion // inferred from sequence or structural similarity /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation /// 0071944 // cell periphery // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005001 // transmembrane receptor protein tyrosine phosphatase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0043395 // heparan sulfate proteoglycan binding // inferred from electronic annotation","chr1:198608224-198719756 (+) // 96.38 // q31.3"]
["11726434_at",0.010158062,-0.05346489,0.19679523,-0.030096292,0,0,0.747534,0.46455285,1.0433295,0.061194822,1.0433295,"up","CHL1",10752,"0001764 // neuron migration // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0007610 // behavior // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0050890 // cognition // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0030425 // dendrite // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation","","chr3:238649-451095 (+) // 95.63 // p26.3"]
["11756589_x_at",0.03732109,-0.2027092,-0.1904335,0.15920734,0.107040405,-0.03732109,0.39336404,0.11678084,-1.1446576,-0.19491613,1.1446576,"down","NSUN5P1",155400,"","","","chr7:72418837-72425262 (-) // 88.32 // q11.23"]
["11742911_at",-0.08882356,0.122848034,0.08787656,-0.0878768,-0.19814324,0.13034606,0.75272346,0.47206938,1.0662347,0.09252505,1.0662347,"up","IGSF6",10261,"0006955 // immune response // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement","0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004888 // transmembrane signaling receptor activity // traceable author statement","chr16:21651924-21663981 (-) // 88.71 // p12.2"]
["11762098_at",-0.30557394,0.11464834,0.31053042,-0.40446782,0.051079273,-0.051079273,0.76254743,0.48664406,1.1287225,0.1746909,1.1287225,"up","SOBP",55084,"0007605 // sensory perception of sound // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0042472 // inner ear morphogenesis // inferred from electronic annotation","","0046872 // metal ion binding // inferred from electronic annotation","chr6:107811807-107836277 (+) // 78.89 // q21"]
["11762703_a_at",-0.14684248,0.041270256,0.011153698,-0.011153698,-0.15657616,0.089514256,0.9850723,0.9561091,-1.0037507,-0.005400968,1.0037507,"down","LOC100131726",100131726,"","","","chr8:124213411-124214983 (-) // 48.4 // q24.13"]
["11742988_s_at",0.034573555,-0.059820175,-0.10180378,-0.009716034,0.009716034,0.024419785,0.6108463,0.29082432,-1.0356166,-0.050490044,1.0356166,"down","EZR",7430,"0007016 // cytoskeletal anchoring at plasma membrane // non-traceable author statement /// 0007159 // leukocyte cell-cell adhesion // inferred from expression pattern /// 0007411 // axon guidance // traceable author statement /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0022614 // membrane to membrane docking // inferred from expression pattern /// 0030855 // epithelial cell differentiation // inferred from electronic annotation /// 0035088 // establishment or maintenance of apical/basal cell polarity // inferred from electronic annotation /// 0051017 // actin filament bundle assembly // inferred from direct assay","0001726 // ruffle // inferred from direct assay /// 0001931 // uropod // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005884 // actin filament // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005902 // microvillus // inferred from direct assay /// 0005902 // microvillus // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from sequence or structural similarity /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0019898 // extrinsic to membrane // inferred from direct assay /// 0019898 // extrinsic to membrane // inferred from electronic annotation /// 0030175 // filopodium // inferred from direct assay /// 0030863 // cortical cytoskeleton // traceable author statement /// 0031528 // microvillus membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation /// 0050839 // cell adhesion molecule binding // inferred from physical interaction /// 0051015 // actin filament binding // inferred from direct assay","chr6:159186779-159239340 (-) // 85.67 // q25.3"]
["11732170_a_at",-0.011914253,-0.10303402,-0.06179619,0.12487888,0.13117123,0.011914253,0.21225452,0.034058698,-1.1082138,-0.14823622,1.1082138,"down","GRSF1",2926,"0006378 // mRNA polyadenylation // traceable author statement /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0016331 // morphogenesis of embryonic epithelium // inferred from electronic annotation","0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // traceable author statement","chr4:71682122-71705607 (-) // 69.33 // q13.3"]
["11743831_s_at",-0.10058355,0.05650139,0.00805521,-0.13928175,-0.008054733,0.11886358,0.99212754,0.978497,-1.0017469,-0.002518035,1.0017469,"down","RPS6KA2",6196,"0000089 // mitotic metaphase // inferred from electronic annotation /// 0001556 // oocyte maturation // inferred from electronic annotation /// 0002035 // brain renin-angiotensin system // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007243 // intracellular protein kinase cascade // traceable author statement /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0008063 // Toll signaling pathway // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010659 // cardiac muscle cell apoptotic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035556 // intracellular signal transduction // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045786 // negative regulation of cell cycle // inferred from direct assay /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0060047 // heart contraction // inferred from electronic annotation /// 0070613 // regulation of protein processing // inferred from electronic annotation /// 0071322 // cellular response to carbohydrate stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004711 // ribosomal protein S6 kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:166822873-167276039 (-) // 98.19 // q27"]
["11751522_x_at",-0.056509018,0.06998873,-0.038465023,-0.1260252,0.038465023,0.26139545,0.8338942,0.6072987,-1.0470088,-0.0662735,1.0470088,"down","SHF",90525,"0006915 // apoptotic process // inferred from electronic annotation","","","chr15:45459910-45473405 (-) // 99.66 // q21.1"]
["11735114_at",0.08157253,0.11290407,0.14824629,-0.09438038,-0.09615278,-0.08157253,0.03113278,0.00049162,1.1526407,0.20494287,1.1526407,"up","CNOT4",4850,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0051865 // protein autoubiquitination // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:135069765-135194851 (-) // 93.7 // q33"]
["11743250_a_at",-0.45051265,-0.070231676,-0.31995058,0.33239198,0.070231676,0.19047427,0.17810108,0.02392654,-1.3927448,-0.4779309,1.3927448,"down","MMP2",4313,"0001525 // angiogenesis // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001955 // blood vessel maturation // inferred from electronic annotation /// 0001957 // intramembranous ossification // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // traceable author statement /// 0007566 // embryo implantation // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030574 // collagen catabolic process // inferred from electronic annotation /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0060325 // face morphogenesis // inferred from electronic annotation /// 0060346 // bone trabecula formation // inferred from electronic annotation /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030017 // sarcomere // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // traceable author statement /// 0004252 // serine-type endopeptidase activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:55512882-55540603 (+) // 90.65 // q12.2"]
["11739829_x_at",-0.034035683,-0.015013218,0.089841366,-0.3258567,0.11909485,0.015013218,0.83464015,0.6087609,1.055198,0.07751367,1.055198,"up","CYS1",192668,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0035085 // cilium axoneme // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0060170 // cilium membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr2:10196919-10220538 (-) // 78.0 // p25.1"]
["11751601_x_at",0.007634163,0.007871628,-0.007634163,0.0096616745,-0.11763477,-0.07528782,0.46859765,0.16697615,1.0451506,0.06371089,1.0451506,"up","DPP7",29952,"0006508 // proteolysis // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0004177 // aminopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // traceable author statement /// 0008239 // dipeptidyl-peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr9:140006562-140009168 (-) // 99.33 // q34.3"]
["11751287_a_at",-0.10514641,0.10355759,0.19395685,-0.14651442,0.029018402,-0.029018402,0.6489822,0.33236098,1.0814453,0.11296074,1.0814453,"up","MMP19",4327,"0001525 // angiogenesis // inferred from electronic annotation /// 0001541 // ovarian follicle development // inferred from electronic annotation /// 0001542 // ovulation from ovarian follicle // inferred from electronic annotation /// 0001554 // luteolysis // inferred from electronic annotation /// 0006508 // proteolysis // non-traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030574 // collagen catabolic process // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:56230753-56236720 (-) // 99.72 // q13.2"]
["11749442_x_at",-0.008159637,-0.031000614,0.008160114,-0.045451164,0.045562267,0.103853226,0.68197894,0.3730974,-1.0316747,-0.0449882,1.0316747,"down","PYCRL",65263,"0006561 // proline biosynthetic process // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0055129 // L-proline biosynthetic process // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0004735 // pyrroline-5-carboxylate reductase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation","chr8:144686879-144691943 (-) // 96.77 // q24.3"]
["11754889_a_at",0.040063858,0.35443163,0.24539661,-0.040064335,-0.11759949,-0.18501663,0.20470399,0.03180824,1.254858,0.32752413,1.254858,"up","CCDC111",201973,"0006260 // DNA replication // inferred from electronic annotation /// 0006269 // DNA replication, synthesis of RNA primer // inferred from electronic annotation","","0003896 // DNA primase activity // inferred from electronic annotation","chr4:185570824-185616112 (+) // 95.36 // q35.1"]
["11736471_at",0.19401073,0.042437553,-0.33615828,-0.10622835,-0.042437553,0.10123205,0.97274023,0.9229169,-1.0121516,-0.017425392,1.0121516,"down","RAB9B",51209,"0006810 // transport // inferred from electronic annotation /// 0006895 // Golgi to endosome transport // non-traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // non-traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation","chrX:103077254-103087212 (-) // 89.7 // q22.2"]
["11757687_x_at",0.008077621,0.13792992,0.15181732,-0.110918045,-0.02471447,-0.008077621,0.27576423,0.05765954,1.1074015,0.14717837,1.1074015,"up","DAD1",1603,"0001824 // blastocyst development // inferred from electronic annotation /// 0006486 // protein glycosylation // inferred from sequence or structural similarity /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0007584 // response to nutrient // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // inferred by curator /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005789 // endoplasmic reticulum membrane // traceable author statement /// 0008250 // oligosaccharyltransferase complex // inferred from sequence or structural similarity /// 0008250 // oligosaccharyltransferase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004576 // oligosaccharyl transferase activity // inferred from sequence or structural similarity /// 0004579 // dolichyl-diphosphooligosaccharide-protein glycotransferase activity // inferred by curator /// 0004579 // dolichyl-diphosphooligosaccharide-protein glycotransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr14:23033804-23044128 (-) // 89.11 // q11.2"]
["11725666_at",0.017697334,-0.024970055,-0.045853615,0.22645378,0.070765495,-0.017697334,0.52030253,0.2072678,-1.0798888,-0.11088279,1.0798888,"down","HS2ST1 /// LOC339524","339524 /// 9653","0015014 // heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process // inferred from electronic annotation /// 0030202 // heparin metabolic process // inferred from electronic annotation /// 0060676 // ureteric bud formation // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004394 // heparan sulfate 2-O-sulfotransferase activity // inferred from electronic annotation /// 0008146 // sulfotransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr1:87380334-87575658 (+) // 90.34 // p22.3"]
["11725045_a_at",0.11194897,-0.045399666,0.012387276,0.29666328,-0.012387276,-0.07729912,0.9046094,0.74838656,-1.0300255,-0.04268003,1.0300255,"down","UAP1",6675,"0006048 // UDP-N-acetylglucosamine biosynthetic process // inferred from electronic annotation /// 0006048 // UDP-N-acetylglucosamine biosynthetic process // traceable author statement /// 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay","0003977 // UDP-N-acetylglucosamine diphosphorylase activity // traceable author statement /// 0003977 // UDP-N-acetylglucosamine diphosphorylase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation","chr1:162531268-162569627 (+) // 94.36 // q23.3"]
["11745051_a_at",0.04360342,0.010032892,-0.010033131,-0.17574143,-0.06932211,0.08146095,0.7138661,0.4161943,1.0490392,0.06906865,1.0490392,"up","GRIA3",2892,"0001919 // regulation of receptor recycling // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0007215 // glutamate receptor signaling pathway // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0010226 // response to lithium ion // inferred from electronic annotation /// 0035235 // ionotropic glutamate receptor signaling pathway // inferred from electronic annotation /// 0060992 // response to fungicide // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0032279 // asymmetric synapse // inferred from electronic annotation /// 0032281 // alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex // inferred from sequence or structural similarity /// 0032281 // alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043083 // synaptic cleft // inferred from electronic annotation /// 0043195 // terminal button // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0043198 // dendritic shaft // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004970 // ionotropic glutamate receptor activity // inferred from electronic annotation /// 0004971 // alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity // inferred from direct assay /// 0004971 // alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005234 // extracellular-glutamate-gated ion channel activity // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from electronic annotation","chrX:122318151-122338534 (+) // 78.64 // q25"]
["11728883_a_at",0.092549324,-0.23108196,-0.0094845295,0.10508871,-0.08734131,0.009484291,0.8436489,0.6250295,-1.041322,-0.05841624,1.041322,"down","PRSS35",167681,"0008152 // metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation","chr6:84222054-84235423 (+) // 94.56 // q14.2"]
["11745786_a_at",0.25989532,-0.0076990128,0.0076990128,0.1029129,-0.041659355,-0.037973404,0.75133365,0.47000226,1.0561917,0.07887168,1.0561917,"up","CSNK2B",1460,"0007165 // signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032927 // positive regulation of activin receptor signaling pathway // inferred from mutant phenotype /// 0033211 // adiponectin-mediated signaling pathway // inferred from direct assay /// 0043537 // negative regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0043623 // cellular protein complex assembly // non-traceable author statement /// 0045859 // regulation of protein kinase activity // non-traceable author statement /// 0045859 // regulation of protein kinase activity // inferred from electronic annotation /// 0051101 // regulation of DNA binding // non-traceable author statement /// 0061154 // endothelial tube morphogenesis // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005956 // protein kinase CK2 complex // inferred from electronic annotation /// 0005956 // protein kinase CK2 complex // non-traceable author statement /// 0031519 // PcG protein complex // inferred from direct assay","0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0019887 // protein kinase regulator activity // inferred from electronic annotation /// 0019887 // protein kinase regulator activity // non-traceable author statement /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:31633853-31641285 (+) // 91.34 // p21.33"]
["11734090_s_at",0.2714014,-0.16440582,-0.08149433,0.32766867,0.081493855,-0.2851982,0.96139735,0.88992083,-1.0230105,-0.03282094,1.0230105,"down","C5orf42",65250,"","0016021 // integral to membrane // inferred from electronic annotation","","chr5:37106089-37214230 (-) // 86.97 // p13.2"]
["11736182_x_at",0.065748215,0.19434166,0.044755936,-0.047522068,-0.08175945,-0.044755936,0.197612,0.029696852,1.1169989,0.15962778,1.1169989,"up","ZNF747",65988,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:30542431-30546325 (-) // 64.2 // p11.2"]
["11736238_a_at",-0.3978505,-0.16501617,-0.02105856,0.054956436,0.09068537,0.02105856,0.3423125,0.088424064,-1.1893791,-0.25020862,1.1893791,"down","ABCA5",23461,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0010745 // negative regulation of macrophage derived foam cell differentiation // inferred from sequence or structural similarity /// 0010745 // negative regulation of macrophage derived foam cell differentiation // inferred from electronic annotation /// 0033344 // cholesterol efflux // inferred from sequence or structural similarity /// 0033344 // cholesterol efflux // inferred from electronic annotation /// 0034375 // high-density lipoprotein particle remodeling // inferred from sequence or structural similarity /// 0034375 // high-density lipoprotein particle remodeling // inferred from electronic annotation /// 0043691 // reverse cholesterol transport // inferred by curator","0000139 // Golgi membrane // inferred from electronic annotation /// 0005764 // lysosome // inferred from sequence or structural similarity /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from sequence or structural similarity /// 0005770 // late endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr17:67239944-67323252 (-) // 72.88 // q24.3"]
["11741911_a_at",-0.0050525665,0.11563587,0.0050525665,0.02132845,-0.26838112,-0.27544212,0.38690495,0.11307698,1.1588632,0.21271025,1.1588632,"up","GBP3",2635,"0006184 // GTP catabolic process // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr1:89472359-89488549 (-) // 99.57 // p22.2"]
["11754294_s_at",0.5847988,0.11359501,0.17202091,-0.11359501,-0.17215157,-0.15475559,0.23784925,0.042955,1.3537604,0.43697238,1.3537604,"up","STK40",83931,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr1:36805228-36811194 (-) // 90.61 // p34.3"]
["11762285_x_at",0.12502503,-0.27046943,0.22422266,-0.041457176,-0.034482956,0.034482718,0.92810297,0.8063369,1.0281699,0.04007864,1.0281699,"up","SSX8",280659,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation","chrX:52651984-52659458 (+) // 99.9 // p11.22"]
["11756978_a_at",-0.13225746,0.17562532,-0.010909319,-0.014725685,0.010909319,0.20635128,0.8537577,0.6437708,-1.0400783,-0.056692116,1.0400783,"down","KCNN2",3781,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // non-traceable author statement /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement","0005216 // ion channel activity // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0015269 // calcium-activated potassium channel activity // inferred from electronic annotation /// 0016286 // small conductance calcium-activated potassium channel activity // inferred from electronic annotation /// 0016286 // small conductance calcium-activated potassium channel activity // traceable author statement","chr5:113798745-113832192 (+) // 75.62 // q22.3"]
["11743004_x_at",0.18066502,-0.031184196,-0.068468094,0.22170448,0.031184196,-0.08106136,0.92943877,0.8095486,-1.0212044,-0.030271592,1.0212044,"down","EXOSC9",5393,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000956 // nuclear-transcribed mRNA catabolic process // inferred from mutant phenotype /// 0006364 // rRNA processing // non-traceable author statement /// 0006364 // rRNA processing // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0030307 // positive regulation of cell growth // inferred from mutant phenotype /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // inferred from mutant phenotype /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement /// 0071028 // nuclear mRNA surveillance // inferred from mutant phenotype /// 0071035 // nuclear polyadenylation-dependent rRNA catabolic process // inferred from mutant phenotype","0000176 // nuclear exosome (RNase complex) // inferred from direct assay /// 0000176 // nuclear exosome (RNase complex) // non-traceable author statement /// 0000178 // exosome (RNase complex) // inferred from direct assay /// 0000178 // exosome (RNase complex) // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005730 // nucleolus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000175 // 3'-5'-exoribonuclease activity // non-traceable author statement /// 0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0004532 // exoribonuclease activity // inferred from direct assay /// 0017091 // AU-rich element binding // inferred from direct assay","chr4:122722471-122738176 (+) // 96.72 // q27"]
["11737224_at",-0.18939447,0.03126812,-0.07007074,0.08264518,-0.03126812,0.14751172,0.45758718,0.1592824,-1.1037107,-0.142362,1.1037107,"down","MAS1",4142,"0001933 // negative regulation of protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007250 // activation of NF-kappaB-inducing kinase activity // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0014823 // response to activity // inferred from electronic annotation /// 0021766 // hippocampus development // inferred from electronic annotation /// 0034698 // response to gonadotropin stimulus // inferred from electronic annotation /// 0038166 // angiotensin-mediated signaling pathway // inferred from sequence or structural similarity /// 0038166 // angiotensin-mediated signaling pathway // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0050727 // regulation of inflammatory response // inferred from electronic annotation /// 0060732 // positive regulation of inositol phosphate biosynthetic process // inferred from electronic annotation /// 0070528 // protein kinase C signaling cascade // inferred from mutant phenotype /// 0071375 // cellular response to peptide hormone stimulus // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0001595 // angiotensin receptor activity // inferred from sequence or structural similarity /// 0001595 // angiotensin receptor activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from direct assay /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004945 // angiotensin type II receptor activity // traceable author statement /// 0017046 // peptide hormone binding // inferred from electronic annotation /// 0042277 // peptide binding // inferred from sequence or structural similarity /// 0042277 // peptide binding // inferred from electronic annotation","chr6:160327721-160329108 (+) // 99.93 // q25.3"]
["11738608_a_at",-0.021595955,0.16530633,0.07814646,-0.008160591,0.00816083,-0.26397443,0.50153345,0.1921758,1.1187934,0.1619436,1.1187934,"up","SYT10",341359,"0006810 // transport // inferred from electronic annotation","0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr12:33528005-33592754 (-) // 99.81 // p11.1"]
["11747199_a_at",0.2129054,-0.25662756,-0.33044004,0.17863417,0.06190157,-0.06190157,0.6818244,0.37276602,-1.1362383,-0.18426548,1.1362383,"down","CHERP",10523,"0006396 // RNA processing // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from direct assay /// 0007399 // nervous system development // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0051209 // release of sequestered calcium ion into cytosol // inferred from mutant phenotype /// 0051533 // positive regulation of NFAT protein import into nucleus // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0033017 // sarcoplasmic reticulum membrane // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0044325 // ion channel binding // inferred from physical interaction","chr19:16629767-16637085 (-) // 97.21 // p13.11"]
["11730505_a_at",0.038512707,-0.1890192,-0.16259956,-0.038512707,0.08878088,0.07572365,0.4459201,0.1504907,-1.106778,-0.14636591,1.106778,"down","RD3",343035,"0007601 // visual perception // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0060041 // retina development in camera-type eye // inferred from electronic annotation","","","chr1:211649863-211666259 (-) // 74.61 // q32.3"]
["11757667_x_at",0.025270939,0.21100163,-0.25518942,-0.2999239,-0.0252707,0.07227993,0.8716192,0.67959654,1.0555532,0.07799929,1.0555532,"up","APOA2",336,"0002526 // acute inflammatory response // inferred from electronic annotation /// 0002740 // negative regulation of cytokine secretion involved in immune response // inferred from direct assay /// 0006457 // protein folding // inferred from direct assay /// 0006629 // lipid metabolic process // traceable author statement /// 0006641 // triglyceride metabolic process // traceable author statement /// 0006656 // phosphatidylcholine biosynthetic process // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0009395 // phospholipid catabolic process // inferred from direct assay /// 0009749 // response to glucose stimulus // inferred from direct assay /// 0010873 // positive regulation of cholesterol esterification // inferred from direct assay /// 0010903 // negative regulation of very-low-density lipoprotein particle remodeling // inferred from direct assay /// 0018158 // protein oxidation // inferred from direct assay /// 0018206 // peptidyl-methionine modification // inferred from direct assay /// 0030300 // regulation of intestinal cholesterol absorption // inferred from electronic annotation /// 0030301 // cholesterol transport // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0031647 // regulation of protein stability // inferred from direct assay /// 0032375 // negative regulation of cholesterol transport // inferred from mutant phenotype /// 0033344 // cholesterol efflux // inferred from direct assay /// 0033700 // phospholipid efflux // inferred from direct assay /// 0034370 // triglyceride-rich lipoprotein particle remodeling // inferred from direct assay /// 0034374 // low-density lipoprotein particle remodeling // inferred from direct assay /// 0034375 // high-density lipoprotein particle remodeling // inferred from direct assay /// 0034380 // high-density lipoprotein particle assembly // inferred from direct assay /// 0034384 // high-density lipoprotein particle clearance // inferred from direct assay /// 0042157 // lipoprotein metabolic process // traceable author statement /// 0042157 // lipoprotein metabolic process // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042632 // cholesterol homeostasis // inferred from direct assay /// 0042632 // cholesterol homeostasis // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0043691 // reverse cholesterol transport // inferred from direct assay /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045416 // positive regulation of interleukin-8 biosynthetic process // inferred from direct assay /// 0046340 // diacylglycerol catabolic process // inferred from direct assay /// 0050995 // negative regulation of lipid catabolic process // inferred from direct assay /// 0050996 // positive regulation of lipid catabolic process // inferred from direct assay /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0060192 // negative regulation of lipase activity // inferred from direct assay /// 0060192 // negative regulation of lipase activity // inferred from electronic annotation /// 0060621 // negative regulation of cholesterol import // inferred from direct assay /// 0060695 // negative regulation of cholesterol transporter activity // inferred from direct assay","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0034361 // very-low-density lipoprotein particle // inferred from direct assay /// 0034364 // high-density lipoprotein particle // inferred from direct assay /// 0034364 // high-density lipoprotein particle // inferred from electronic annotation /// 0034366 // spherical high-density lipoprotein particle // inferred from direct assay /// 0042627 // chylomicron // inferred from direct assay","0005319 // lipid transporter activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from direct assay /// 0008035 // high-density lipoprotein particle binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from direct assay /// 0008289 // lipid binding // inferred from electronic annotation /// 0015485 // cholesterol binding // inferred from direct assay /// 0017127 // cholesterol transporter activity // inferred from direct assay /// 0017127 // cholesterol transporter activity // inferred from electronic annotation /// 0031210 // phosphatidylcholine binding // inferred from direct assay /// 0034190 // apolipoprotein receptor binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0055102 // lipase inhibitor activity // inferred from direct assay /// 0060228 // phosphatidylcholine-sterol O-acyltransferase activator activity // inferred from direct assay /// 0070653 // high-density lipoprotein particle receptor binding // inferred from physical interaction","chr1:161192081-161193418 (-) // 94.17 // q23.3"]
["11763053_a_at",0.031390667,-0.1530652,-0.13178682,0.12986612,-0.031390667,0.12241173,0.38861844,0.11412691,-1.1158292,-0.15811625,1.1158292,"down","KIF25-AS1",100505879,"","","","chr6:168396470-168397188 (-) // 74.83 // q27"]
["11730504_at",-0.17570543,0.027242184,0.023882389,0.1792121,-0.023882389,-0.03687811,0.73864985,0.4503379,-1.0577589,-0.08101086,1.0577589,"down","ADAMTS2",9509,"0006508 // proteolysis // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016485 // protein processing // inferred from electronic annotation /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030574 // collagen catabolic process // inferred from electronic annotation /// 0043588 // skin development // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // traceable author statement /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:178540737-178772329 (-) // 98.2 // q35.3"]
["11758578_s_at",-0.2545991,-0.2268238,-0.12184048,0.14297915,0.12184,0.14389277,0.044152204,0.0011968783,-1.2634119,-0.33732504,1.2634119,"down","AEBP2",121536,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0035098 // ESC/E(Z) complex // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:19673487-19673894 (+) // 30.22 // p12.3"]
["11764085_at",-0.042650223,0.042650223,-0.04904318,-0.1600008,0.15700436,0.24781895,0.7608999,0.48388588,-1.0702555,-0.09795527,1.0702555,"down","","","","","","chr17:17402076-17402529 (+) // 96.79 // p11.2"]
["11761989_at",-0.014229298,0.31072474,-0.049325943,0.014229298,0.069386005,-0.09510517,0.78787047,0.52636784,1.061585,0.086219825,1.061585,"up","GPR116",221395,"0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement","chr6:46821310-46836830 (-) // 98.22 // p12.3"]
["11739194_s_at",-0.037552834,-0.054415703,0.15246964,-0.0885458,0.16493988,0.037552834,0.9517256,0.8656226,-1.0124252,-0.0178153,1.0124252,"down","LOC100287789 /// SLMAP","100287789 /// 7871","0006457 // protein folding // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005790 // smooth endoplasmic reticulum // traceable author statement /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016272 // prefoldin complex // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation","0051082 // unfolded protein binding // inferred from electronic annotation","chr3:57743173-57915283 (+) // 98.48 // p14.3"]
["AFFX-ThrX-3_at",0.2892456,-0.28572464,0.045487404,0.18725967,-0.045487404,-0.046147346,0.9778594,0.93670195,-1.010829,-0.01553892,1.010829,"down",0.045487404,"","","0006508 // proteolysis // inferred from electronic annotation /// 0006520 // cellular amino acid metabolic process // inferred from electronic annotation /// 0006566 // threonine metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009082 // branched chain family amino acid biosynthetic process // inferred from electronic annotation /// 0009086 // methionine biosynthetic process // inferred from electronic annotation /// 0009088 // threonine biosynthetic process // inferred from electronic annotation /// 0009097 // isoleucine biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004412 // homoserine dehydrogenase activity // inferred from electronic annotation /// 0004413 // homoserine kinase activity // inferred from electronic annotation /// 0004795 // threonine synthase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0050661 // NADP binding // inferred from electronic annotation"]
["11758614_s_at",-0.08652544,-0.027489662,-0.10396862,0.027489662,0.13250542,0.20294237,0.18462029,0.025841981,-1.1436459,-0.19364041,1.1436459,"down","FAM19A5",25817,"","0005576 // extracellular region // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr22:49147376-49147743 (+) // 99.73 // q13.32"]
["11760599_at",0.04337597,-0.21926737,-0.23927593,0.26165152,-0.04337597,0.14196968,0.38504925,0.11184842,-1.1962101,-0.25847086,1.1962101,"down","HIP1",3092,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0008219 // cell death // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from direct assay /// 0048260 // positive regulation of receptor-mediated endocytosis // inferred from mutant phenotype /// 0048260 // positive regulation of receptor-mediated endocytosis // inferred from electronic annotation /// 0048268 // clathrin coat assembly // inferred from direct assay","0005624 // membrane fraction // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005856 // cytoskeleton // traceable author statement /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from direct assay /// 0030665 // clathrin coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003779 // actin binding // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0030276 // clathrin binding // inferred from direct assay /// 0035091 // phosphatidylinositol binding // inferred from direct assay","chr7:75362737-75368280 (-) // 87.16 // q11.23"]
["11755837_a_at",0.324553,0.0036234856,-0.0036239624,0.2766266,-0.19160128,-0.14307499,0.7877295,0.5260807,1.0924249,0.12753406,1.0924249,"up","ARHGEF5",7984,"0032319 // regulation of Rho GTPase activity // inferred from direct assay /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005525 // GTP binding // traceable author statement /// 0005543 // phospholipid binding // inferred from electronic annotation","chr7:144062001-144077724 (+) // 97.28 // q35"]
["11746882_x_at",0.1245718,-0.13666296,-0.1245718,0.2757187,-0.21930361,0.1795702,0.7807738,0.51433545,-1.0899154,-0.12421615,1.0899154,"down","ZNF155",7711,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:44488345-44502100 (+) // 69.13 // q13.31"]
["11734739_a_at",-0.42962527,0,0.09165549,0.002568245,0,0,0.78341824,0.5188847,-1.0818591,-0.11351263,1.0818591,"down","PHYHIPL",84457,"","0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","","chr10:60936285-61009168 (+) // 88.51 // q21.1"]
["11722463_a_at",-0.76617956,-0.011027336,0.055455685,-0.83467484,0.0734067,0.011026859,0.99334365,0.9819222,1.0066043,0.009496685,1.0066043,"up","TNKS2",80351,"0000209 // protein polyubiquitination // inferred from direct assay /// 0006471 // protein ADP-ribosylation // inferred from direct assay /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0032212 // positive regulation of telomere maintenance via telomerase // inferred by curator /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0040014 // regulation of multicellular organism growth // inferred from electronic annotation /// 0070198 // protein localization to chromosome, telomeric region // inferred from mutant phenotype /// 0070213 // protein auto-ADP-ribosylation // inferred from direct assay /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from mutant phenotype","0000139 // Golgi membrane // inferred from electronic annotation /// 0000242 // pericentriolar material // inferred from direct assay /// 0000781 // chromosome, telomeric region // inferred from electronic annotation /// 0000784 // nuclear chromosome, telomeric region // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005792 // microsome // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0003950 // NAD+ ADP-ribosyltransferase activity // inferred from direct assay /// 0003950 // NAD+ ADP-ribosyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:93558068-93625506 (+) // 99.95 // q23.32"]
["11742816_a_at",-0.16322708,-0.20736885,0.022668839,0.058654785,0.241436,-0.022668839,0.39635468,0.11859663,-1.1554459,-0.20844975,1.1554459,"down","FAM13A",10144,"0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005096 // GTPase activator activity // inferred from electronic annotation","chr4:89647110-89978311 (-) // 98.33 // q22.1"]
["11734919_s_at",0.020698547,-0.020698547,0.03808403,0.04525566,-0.044667244,-0.13607979,0.66637564,0.35352182,1.0409194,0.057858393,1.0409194,"up","TCEA1",6917,"0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006414 // translational elongation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0030218 // erythrocyte differentiation // inferred from electronic annotation /// 0032784 // regulation of transcription elongation, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0050434 // positive regulation of viral transcription // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:37317046-37319642 (+) // 92.43 // p22.2 /// chr8:54879116-54935008 (-) // 99.14 // q11.23"]
["11718013_at",0.35836506,-0.23354912,-0.20736122,0.6367512,0.088807106,-0.088807106,0.7425724,0.45695964,-1.1808007,-0.23976545,1.1808007,"down","IRS2",8660,"0002053 // positive regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0002903 // negative regulation of B cell apoptotic process // inferred from sequence or structural similarity /// 0002903 // negative regulation of B cell apoptotic process // inferred from electronic annotation /// 0006006 // glucose metabolic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // non-traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from sequence or structural similarity /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0010748 // negative regulation of plasma membrane long-chain fatty acid transport // inferred from mutant phenotype /// 0010907 // positive regulation of glucose metabolic process // inferred from mutant phenotype /// 0019216 // regulation of lipid metabolic process // traceable author statement /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0030879 // mammary gland development // inferred from electronic annotation /// 0030890 // positive regulation of B cell proliferation // inferred from sequence or structural similarity /// 0030890 // positive regulation of B cell proliferation // inferred from electronic annotation /// 0032000 // positive regulation of fatty acid beta-oxidation // inferred from mutant phenotype /// 0032024 // positive regulation of insulin secretion // inferred from sequence or structural similarity /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from mutant phenotype /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0033673 // negative regulation of kinase activity // inferred from sequence or structural similarity /// 0033673 // negative regulation of kinase activity // inferred from electronic annotation /// 0045725 // positive regulation of glycogen biosynthetic process // inferred from mutant phenotype /// 0045725 // positive regulation of glycogen biosynthetic process // non-traceable author statement /// 0046326 // positive regulation of glucose import // inferred from mutant phenotype /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0055088 // lipid homeostasis // traceable author statement /// 0060397 // JAK-STAT cascade involved in growth hormone signaling pathway // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004871 // signal transducer activity // traceable author statement /// 0005158 // insulin receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation","chr13:110406183-110438915 (-) // 86.22 // q34"]
["11747756_x_at",0.038090706,-0.038090706,-0.15610266,0.10162926,-0.1333158,0.13931036,0.72997975,0.43862334,-1.0628285,-0.08790887,1.0628285,"down","KRT13",3860,"0008544 // epidermis development // traceable author statement /// 0009314 // response to radiation // inferred from electronic annotation /// 0043587 // tongue morphogenesis // inferred from electronic annotation /// 0071300 // cellular response to retinoic acid // inferred from electronic annotation","0005882 // intermediate filament // inferred from electronic annotation /// 0045095 // keratin filament // inferred from direct assay","0005198 // structural molecule activity // inferred from electronic annotation","chr17:39658501-39661864 (-) // 95.42 // q21.2"]
["11758668_s_at",-0.09582949,-0.24552584,0.004161358,0.14900446,0.0010256767,-0.0010256767,0.42897663,0.13908413,-1.1188884,-0.16206612,1.1188884,"down","ARL17A /// ARL17B /// LOC100294341","100294341 /// 100506084 /// 51326","0006810 // transport // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr17:43623420-43623706 (+) // 96.15 // q21.31 /// chr17:62889096-62889382 (+) // 95.8 // q24.1 /// chr17:44376495-44376781 (-) // 96.15 // q21.31 /// chr17:45098551-45098837 (-) // 96.15 // q21.32 /// chr17:44594063-44594349 (-) // 95.8 // q21.31"]
["11742818_a_at",-0.039511204,-0.2713065,-0.40897417,0.44483948,0.107611656,0.039511204,0.27462623,0.057268582,-1.3540221,-0.43725133,1.3540221,"down","PLAUR",5329,"0006501 // C-terminal protein lipidation // traceable author statement /// 0006928 // cellular component movement // non-traceable author statement /// 0006935 // chemotaxis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007596 // blood coagulation // non-traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0016255 // attachment of GPI anchor to protein // traceable author statement /// 0030162 // regulation of proteolysis // non-traceable author statement /// 0042730 // fibrinolysis // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043403 // skeletal muscle tissue regeneration // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0048762 // mesenchymal cell differentiation // inferred from electronic annotation /// 0060742 // epithelial cell differentiation involved in prostate gland development // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0019898 // extrinsic to membrane // traceable author statement /// 0031225 // anchored to membrane // inferred from electronic annotation","0004872 // receptor activity // non-traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0030377 // U-plasminogen activator receptor activity // non-traceable author statement /// 0030377 // U-plasminogen activator receptor activity // inferred from electronic annotation","chr19:44152730-44174502 (-) // 45.24 // q13.31"]
["11716671_x_at",0.017747879,-0.16223812,-0.19514656,0.15372849,0.07282734,-0.017747879,0.34832785,0.091427684,-1.1350964,-0.18281487,1.1350964,"down","PIGY",84992,"0006506 // GPI anchor biosynthetic process // inferred from direct assay /// 0006506 // GPI anchor biosynthetic process // inferred from electronic annotation /// 0006506 // GPI anchor biosynthetic process // inferred from mutant phenotype /// 0009893 // positive regulation of metabolic process // inferred from mutant phenotype","0000506 // glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr4:89442145-89444964 (-) // 95.26 // q22.1"]
["11736647_s_at",-0.0578928,-0.022392273,-0.15939903,0.022392273,0.042892456,0.082858086,0.24209332,0.04454685,-1.0937444,-0.12927562,1.0937444,"down","CRK",1398,"0000186 // activation of MAPKK activity // traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0032319 // regulation of Rho GTPase activity // inferred from direct assay /// 0032956 // regulation of actin cytoskeleton organization // inferred from direct assay /// 0035020 // regulation of Rac protein signal transduction // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048013 // ephrin receptor signaling pathway // inferred from direct assay","0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred by curator /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005070 // SH3/SH2 adaptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0030674 // protein binding, bridging // inferred from electronic annotation /// 0042169 // SH2 domain binding // inferred from physical interaction /// 0045309 // protein phosphorylated amino acid binding // inferred from electronic annotation /// 0046875 // ephrin receptor binding // inferred from physical interaction /// 0046875 // ephrin receptor binding // inferred from electronic annotation","chr17:1325475-1359544 (-) // 80.25 // p13.3"]
["11745719_a_at",0.17999697,0.24026585,0.08878183,-0.08878231,-0.09758139,-0.31130075,0.14918295,0.016873244,1.2618756,0.3355697,1.2618756,"up","HMG20A",10363,"0006325 // chromatin organization // non-traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr15:77712734-77777945 (+) // 95.38 // q24.3"]
["11759558_at",0.13830423,-0.08647394,-0.030274391,0.0023355484,-0.0023355484,0.09102392,0.9134927,0.77013266,-1.01618,-0.02315603,1.01618,"down","THAP3",90326,"","","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:6684924-6693622 (+) // 97.43 // p36.31"]
["11757693_s_at",0.3020053,0.058269024,0.13177538,-0.058269024,-0.124530315,-0.15483713,0.1764335,0.023513751,1.2113049,0.27656206,1.2113049,"up","PIAS3",10401,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0016925 // protein sumoylation // inferred from electronic annotation /// 0016925 // protein sumoylation // inferred from sequence or structural similarity /// 0033235 // positive regulation of protein sumoylation // inferred from direct assay /// 0045838 // positive regulation of membrane potential // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0015459 // potassium channel regulator activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019789 // SUMO ligase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from electronic annotation /// 0051059 // NF-kappaB binding // inferred from physical interaction","chr1:145585984-145586546 (+) // 93.39 // q21.1"]
["11749935_s_at",-0.013883591,0.013883591,0.035669327,0.32319546,-0.25040245,-0.16575813,0.9355716,0.8227912,1.030167,0.042878207,1.030167,"up","TPM3",7170,"0006928 // cellular component movement // traceable author statement /// 0006936 // muscle contraction // traceable author statement /// 0006937 // regulation of muscle contraction // non-traceable author statement /// 0030049 // muscle filament sliding // traceable author statement","0001725 // stress fiber // inferred from direct assay /// 0002102 // podosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // non-traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005862 // muscle thin filament tropomyosin // traceable author statement /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0030426 // growth cone // inferred from electronic annotation /// 0030863 // cortical cytoskeleton // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation","chr16:52689144-52690489 (+) // 92.75 // q12.2 /// chr19:42011983-42013353 (+) // 90.44 // q13.2 /// chr1:154129587-154155703 (-) // 98.17 // q21.3"]
["11743498_at",0.19634151,0.028287888,-0.028287888,0.0831995,-0.14899826,-0.23601055,0.5451612,0.22796446,1.1219826,0.16605027,1.1219826,"up","BMP2",650,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001501 // skeletal system development // traceable author statement /// 0001503 // ossification // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from direct assay /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001658 // branching involved in ureteric bud morphogenesis // inferred from sequence or structural similarity /// 0001658 // branching involved in ureteric bud morphogenesis // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from sequence or structural similarity /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from sequence or structural similarity /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001837 // epithelial to mesenchymal transition // inferred from direct assay /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0001938 // positive regulation of endothelial cell proliferation // inferred from direct assay /// 0003130 // BMP signaling pathway involved in heart induction // inferred from direct assay /// 0003181 // atrioventricular valve morphogenesis // inferred from sequence or structural similarity /// 0003181 // atrioventricular valve morphogenesis // inferred from electronic annotation /// 0003203 // endocardial cushion morphogenesis // inferred from sequence or structural similarity /// 0003203 // endocardial cushion morphogenesis // inferred from electronic annotation /// 0003308 // negative regulation of Wnt receptor signaling pathway involved in heart development // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006954 // inflammatory response // inferred from sequence or structural similarity /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from sequence or structural similarity /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007507 // heart development // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009790 // embryo development // inferred from sequence or structural similarity /// 0009790 // embryo development // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from sequence or structural similarity /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from electronic annotation /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from mutant phenotype /// 0010894 // negative regulation of steroid biosynthetic process // inferred from direct assay /// 0010922 // positive regulation of phosphatase activity // inferred from direct assay /// 0021537 // telencephalon development // inferred from direct assay /// 0021978 // telencephalon regionalization // inferred from sequence or structural similarity /// 0021978 // telencephalon regionalization // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from sequence or structural similarity /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0030282 // bone mineralization // inferred from sequence or structural similarity /// 0030282 // bone mineralization // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from sequence or structural similarity /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0030501 // positive regulation of bone mineralization // inferred from direct assay /// 0030509 // BMP signaling pathway // inferred from direct assay /// 0030509 // BMP signaling pathway // inferred from mutant phenotype /// 0030509 // BMP signaling pathway // traceable author statement /// 0030509 // BMP signaling pathway // inferred from electronic annotation /// 0031648 // protein destabilization // inferred from electronic annotation /// 0032348 // negative regulation of aldosterone biosynthetic process // inferred from direct assay /// 0032526 // response to retinoic acid // inferred from electronic annotation /// 0033690 // positive regulation of osteoblast proliferation // inferred from sequence or structural similarity /// 0033690 // positive regulation of osteoblast proliferation // inferred from electronic annotation /// 0035051 // cardiac cell differentiation // inferred from direct assay /// 0035051 // cardiac cell differentiation // inferred from mutant phenotype /// 0035054 // embryonic heart tube anterior/posterior pattern specification // inferred from sequence or structural similarity /// 0035054 // embryonic heart tube anterior/posterior pattern specification // inferred from electronic annotation /// 0035630 // bone mineralization involved in bone maturation // inferred from direct assay /// 0040007 // growth // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from sequence or structural similarity /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042482 // positive regulation of odontogenesis // inferred from sequence or structural similarity /// 0042482 // positive regulation of odontogenesis // inferred from electronic annotation /// 0042698 // ovulation cycle // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043569 // negative regulation of insulin-like growth factor receptor signaling pathway // inferred from direct assay /// 0045165 // cell fate commitment // inferred from sequence or structural similarity /// 0045165 // cell fate commitment // inferred from electronic annotation /// 0045597 // positive regulation of cell differentiation // inferred from electronic annotation /// 0045600 // positive regulation of fat cell differentiation // inferred from sequence or structural similarity /// 0045600 // positive regulation of fat cell differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from sequence or structural similarity /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // inferred from direct assay /// 0045669 // positive regulation of osteoblast differentiation // inferred from electronic annotation /// 0045778 // positive regulation of ossification // inferred from direct assay /// 0045778 // positive regulation of ossification // inferred from electronic annotation /// 0045786 // negative regulation of cell cycle // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048711 // positive regulation of astrocyte differentiation // inferred from sequence or structural similarity /// 0048711 // positive regulation of astrocyte differentiation // inferred from electronic annotation /// 0048762 // mesenchymal cell differentiation // inferred from direct assay /// 0048839 // inner ear development // inferred from sequence or structural similarity /// 0048839 // inner ear development // inferred from electronic annotation /// 0050769 // positive regulation of neurogenesis // inferred from electronic annotation /// 0051216 // cartilage development // inferred from electronic annotation /// 0055008 // cardiac muscle tissue morphogenesis // inferred from sequence or structural similarity /// 0055008 // cardiac muscle tissue morphogenesis // inferred from electronic annotation /// 0060039 // pericardium development // inferred from sequence or structural similarity /// 0060039 // pericardium development // inferred from electronic annotation /// 0060128 // corticotropin hormone secreting cell differentiation // inferred from sequence or structural similarity /// 0060128 // corticotropin hormone secreting cell differentiation // inferred from electronic annotation /// 0060129 // thyroid-stimulating hormone-secreting cell differentiation // inferred from sequence or structural similarity /// 0060129 // thyroid-stimulating hormone-secreting cell differentiation // inferred from electronic annotation /// 0060317 // cardiac epithelial to mesenchymal transition // inferred from direct assay /// 0060389 // pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0060395 // SMAD protein signal transduction // inferred from direct assay /// 0060804 // positive regulation of Wnt receptor signaling pathway by BMP signaling pathway // inferred from sequence or structural similarity /// 0060804 // positive regulation of Wnt receptor signaling pathway by BMP signaling pathway // inferred from electronic annotation /// 0061036 // positive regulation of cartilage development // inferred from direct assay /// 0061036 // positive regulation of cartilage development // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0072138 // mesenchymal cell proliferation involved in ureteric bud development // inferred from sequence or structural similarity /// 0072138 // mesenchymal cell proliferation involved in ureteric bud development // inferred from electronic annotation /// 2000065 // negative regulation of cortisol biosynthetic process // inferred from direct assay /// 2000726 // negative regulation of cardiac muscle cell differentiation // inferred from direct assay","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0031988 // membrane-bounded vesicle // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0004745 // retinol dehydrogenase activity // inferred from sequence or structural similarity /// 0004745 // retinol dehydrogenase activity // inferred from electronic annotation /// 0005102 // receptor binding // traceable author statement /// 0005102 // receptor binding // inferred from electronic annotation /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation /// 0019211 // phosphatase activator activity // inferred from direct assay /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046332 // SMAD binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0070700 // BMP receptor binding // inferred from direct assay","chr20:6748335-6760923 (+) // 96.97 // p12.3"]
["11744816_a_at",-0.29995537,0.063635826,-0.063635826,-0.19764185,0.1515832,0.32458878,0.671757,0.36052793,-1.1430025,-0.19282857,1.1430025,"down","RAPH1",65059,"0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation","chr2:204309244-204400058 (-) // 96.92 // q33.2"]
["11747118_a_at",0.0052480698,-0.0052480698,0.26216245,-0.12992859,0.1578958,-0.056158304,0.75438344,0.47491258,1.0693873,0.09678447,1.0693873,"up","DBC1",1620,"0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0008219 // cell death // inferred from direct assay /// 0045786 // negative regulation of cell cycle // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr9:121928910-122131580 (-) // 96.37 // q33.1"]
["11740687_a_at",0.076417446,-0.037061214,0.037061214,-0.19629359,-0.09585261,0.48899412,0.9503222,0.8617582,-1.0282161,-0.04014354,1.0282161,"down","IQCH",64799,"","","","chr15:67547142-67794139 (+) // 97.53 // q23"]
["11760544_at",-0.12088442,0.30865717,0.010250092,-0.14974928,-0.010249615,0.40758944,0.97955966,0.9411269,-1.0115184,-0.016522504,1.0115184,"down","FAM160A2",84067,"0006810 // transport // inferred from electronic annotation /// 0007032 // endosome organization // inferred from mutant phenotype /// 0007040 // lysosome organization // inferred from mutant phenotype /// 0008333 // endosome to lysosome transport // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0045022 // early endosome to late endosome transport // inferred from mutant phenotype","0070695 // FHF complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr11:6237799-6255866 (-) // 97.4 // p15.4"]
["11721384_at",-0.0041251183,0.22501469,0.3118534,0.0041251183,-0.037177086,-0.3345189,0.3688341,0.10267766,1.2312337,0.30010465,1.2312337,"up","ATG2B",55102,"","","","chr14:96747594-96829701 (-) // 99.76 // q32.2"]
["11751567_a_at",0.15370893,-0.047736645,-0.01251173,-0.046464443,0.01251173,0.3006587,0.86451584,0.66547316,-1.0408401,-0.05774852,1.0408401,"down","EGR3",1960,"0001938 // positive regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0002042 // cell migration involved in sprouting angiogenesis // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007274 // neuromuscular synaptic transmission // inferred from electronic annotation /// 0007422 // peripheral nervous system development // inferred from electronic annotation /// 0007517 // muscle organ development // traceable author statement /// 0007623 // circadian rhythm // traceable author statement /// 0035767 // endothelial cell chemotaxis // inferred from mutant phenotype /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:22547664-22550090 (-) // 99.91 // p21.3"]
["11736789_at",-0.40331507,-0.032197,0.032197,0.04675579,0.35596943,-0.07007837,0.5771039,0.25750318,-1.1853561,-0.24532057,1.1853561,"down","FBXO4",26272,"0000209 // protein polyubiquitination // inferred from direct assay /// 0000723 // telomere maintenance // inferred from mutant phenotype /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0031146 // SCF-dependent proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0031398 // positive regulation of protein ubiquitination // inferred from direct assay","0000151 // ubiquitin ligase complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0019005 // SCF ubiquitin ligase complex // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction","chr5:41925355-41935423 (+) // 83.91 // p13.1"]
["11729599_a_at",0.05430293,0.007528782,-0.13538575,-0.21216226,-0.007528782,0.3346007,0.89490926,0.7295417,-1.0445063,-0.06282121,1.0445063,"down","GABRG2",2566,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from electronic annotation /// 0007214 // gamma-aminobutyric acid signaling pathway // inferred from electronic annotation /// 0007214 // gamma-aminobutyric acid signaling pathway // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0030534 // adult behavior // inferred from electronic annotation /// 0034220 // ion transmembrane transport // traceable author statement /// 0051932 // synaptic transmission, GABAergic // inferred from sequence or structural similarity /// 0055085 // transmembrane transport // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0032590 // dendrite membrane // inferred from sequence or structural similarity /// 0034707 // chloride channel complex // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004890 // GABA-A receptor activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008503 // benzodiazepine receptor activity // traceable author statement","chr5:161494328-161582532 (+) // 92.87 // q34"]
["11742738_a_at",0.030234337,0.124528885,0.07751036,-0.060109615,-0.030234814,-0.25672913,0.29132962,0.064096265,1.1432301,0.19311579,1.1432301,"up","BBS9",27241,"0007601 // visual perception // inferred from electronic annotation /// 0045444 // fat cell differentiation // inferred from sequence or structural similarity /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0034464 // BBSome // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0060170 // cilium membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr7:33169151-33645680 (+) // 99.98 // p14.3"]
["11760785_s_at",0.21565485,-0.36725855,-0.029259682,-0.4058652,0.029259682,0.3118167,0.9619123,0.89241254,-1.0271817,-0.03869147,1.0271817,"down","GRK5",2869,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // traceable author statement /// 0007217 // tachykinin receptor signaling pathway // inferred from direct assay /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // traceable author statement /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0038032 // termination of G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from direct assay","0005625 // soluble fraction // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004703 // G-protein coupled receptor kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005080 // protein kinase C binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // traceable author statement /// 0008289 // lipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr10:121211644-121215841 (+) // 93.5 // q26.11"]
["11724295_at",-0.049516678,-0.11795759,0.18396091,-0.14269066,0.21207476,0.049516678,0.9323733,0.815952,-1.0239449,-0.03413802,1.0239449,"down","TSPAN18",90139,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:44748416-44953972 (+) // 80.12 // p11.2"]
["11726053_a_at",0.029257774,-0.0074539185,-0.09849548,0.18258667,-0.041915894,0.0074539185,0.6958969,0.3909956,-1.0533164,-0.074938804,1.0533164,"down","C19orf24",55009,"","0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0044421 // extracellular region part // inferred from direct assay","","chr19:1275443-1279227 (+) // 90.56 // p13.3"]
["11719829_a_at",0.0014953613,-0.0014958382,0.045081615,-0.21505976,0.018257141,-0.022527695,0.61650276,0.2966627,1.0629967,0.08813718,1.0629967,"up","SLC26A11",284129,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0008272 // sulfate transport // inferred from direct assay /// 0008272 // sulfate transport // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation","0008271 // secondary active sulfate transmembrane transporter activity // inferred from electronic annotation /// 0008509 // anion transmembrane transporter activity // inferred from direct assay /// 0015116 // sulfate transmembrane transporter activity // inferred from electronic annotation /// 0015301 // anion:anion antiporter activity // inferred from electronic annotation","chr17:78194199-78227301 (+) // 93.51 // q25.3"]
["11723434_a_at",-0.096259594,0.05500889,-0.0074424744,-0.04689598,0.007442951,0.22782326,0.7391569,0.4512767,-1.0563011,-0.079021156,1.0563011,"down","TBC1D22A",25771,"0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay","chr22:47158517-47571336 (+) // 99.08 // q13.31"]
["11731496_at",-0.17567325,0.067312956,-0.016165257,0.004771471,-0.004771471,0.08815813,0.7095081,0.4101281,-1.0503677,-0.07089447,1.0503677,"down","INHBA",3624,"0000082 // G1/S transition of mitotic cell cycle // inferred from direct assay /// 0001541 // ovarian follicle development // inferred from genetic interaction /// 0001541 // ovarian follicle development // non-traceable author statement /// 0001707 // mesoderm formation // inferred from electronic annotation /// 0001942 // hair follicle development // inferred from genetic interaction /// 0002244 // hemopoietic progenitor cell differentiation // inferred from direct assay /// 0002244 // hemopoietic progenitor cell differentiation // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006917 // induction of apoptosis // inferred from sequence or structural similarity /// 0006952 // defense response // traceable author statement /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007050 // cell cycle arrest // inferred from sequence or structural similarity /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007399 // nervous system development // non-traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008584 // male gonad development // inferred from genetic interaction /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0030154 // cell differentiation // traceable author statement /// 0030218 // erythrocyte differentiation // non-traceable author statement /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0032925 // regulation of activin receptor signaling pathway // inferred from direct assay /// 0040007 // growth // inferred from electronic annotation /// 0042326 // negative regulation of phosphorylation // traceable author statement /// 0042476 // odontogenesis // inferred from genetic interaction /// 0042541 // hemoglobin biosynthetic process // inferred from direct assay /// 0042541 // hemoglobin biosynthetic process // inferred from sequence or structural similarity /// 0042701 // progesterone secretion // inferred from genetic interaction /// 0045077 // negative regulation of interferon-gamma biosynthetic process // traceable author statement /// 0045578 // negative regulation of B cell differentiation // traceable author statement /// 0045648 // positive regulation of erythrocyte differentiation // inferred from direct assay /// 0045650 // negative regulation of macrophage differentiation // traceable author statement /// 0045786 // negative regulation of cell cycle // inferred from direct assay /// 0045786 // negative regulation of cell cycle // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046880 // regulation of follicle-stimulating hormone secretion // inferred from genetic interaction /// 0046881 // positive regulation of follicle-stimulating hormone secretion // traceable author statement /// 0046882 // negative regulation of follicle-stimulating hormone secretion // non-traceable author statement /// 0048333 // mesodermal cell differentiation // inferred from electronic annotation /// 0051799 // negative regulation of hair follicle development // inferred from direct assay /// 0060021 // palate development // inferred from genetic interaction /// 0060279 // positive regulation of ovulation // inferred from sequence or structural similarity /// 0060279 // positive regulation of ovulation // inferred from electronic annotation /// 0061029 // eyelid development in camera-type eye // inferred from sequence or structural similarity /// 0061029 // eyelid development in camera-type eye // inferred from electronic annotation /// 0071372 // cellular response to follicle-stimulating hormone stimulus // inferred from electronic annotation /// 0071397 // cellular response to cholesterol // inferred from electronic annotation","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005576 // extracellular region // inferred from sequence or structural similarity /// 0043509 // activin A complex // inferred from direct assay /// 0043512 // inhibin A complex // inferred from direct assay /// 0043512 // inhibin A complex // inferred from electronic annotation","0005102 // receptor binding // inferred from electronic annotation /// 0005125 // cytokine activity // inferred from direct assay /// 0005125 // cytokine activity // inferred from sequence or structural similarity /// 0005179 // hormone activity // traceable author statement /// 0005179 // hormone activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // traceable author statement /// 0008083 // growth factor activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from sequence or structural similarity /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0070699 // type II activin receptor binding // inferred from physical interaction","chr7:41728127-41742706 (-) // 87.58 // p14.1"]
["11762529_at",-0.02949524,0.00039243698,-0.1344378,0.19026399,-0.00039243698,0.21973538,0.31592175,0.07579692,-1.1415936,-0.19104911,1.1415936,"down","FERMT1",55612,"0007155 // cell adhesion // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0043616 // keratinocyte proliferation // inferred from direct assay /// 0051546 // keratinocyte migration // inferred from direct assay /// 0090162 // establishment of epithelial cell polarity // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation","chr20:6067970-6103861 (-) // 86.85 // p12.3"]
["11724786_s_at",0.51105404,0.42319107,0.4497614,-0.42319107,-0.5082836,-0.52934647,0.012303963,2.192021e-5,1.9295654,0.9482759,1.9295654,"up","C14orf129",51527,"","0005737 // cytoplasm // inferred from electronic annotation","","chr14:96830716-96853623 (+) // 83.97 // q32.2"]
["11716466_s_at",-0.21317673,-0.015659332,0.015659332,0.09159851,0.094389915,-0.21386147,0.85533947,0.64679414,-1.043744,-0.061767858,1.043744,"down","ISCA1",81689,"0016226 // iron-sulfur cluster assembly // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation","chr9:88879460-88897676 (-) // 88.73 // q21.33"]
["11758177_x_at",0.22916746,0.13023567,0.17921686,-0.13023567,-0.13749361,-0.3024807,0.07753768,0.0042343675,1.2920035,0.36960998,1.2920035,"up","LRWD1 /// MIR4467","100616367 /// 222229","0000080 // G1 phase of mitotic cell cycle // inferred from mutant phenotype /// 0006260 // DNA replication // inferred from electronic annotation /// 0006270 // DNA-dependent DNA replication initiation // traceable author statement /// 0006325 // chromatin organization // inferred from mutant phenotype /// 0016568 // chromatin modification // inferred from electronic annotation /// 0071169 // establishment of protein localization to chromatin // inferred from direct assay","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000781 // chromosome, telomeric region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005664 // nuclear origin of replication recognition complex // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005721 // centromeric heterochromatin // inferred from direct assay /// 0031933 // telomeric heterochromatin // inferred from direct assay","0003682 // chromatin binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008327 // methyl-CpG binding // inferred from direct assay /// 0035064 // methylated histone residue binding // inferred from direct assay","chr7:102113157-102113597 (+) // 92.24 // q22.1"]
["11754839_x_at",0.4555459,0.11617041,-0.1403513,0.3551259,-0.23037052,-0.11616993,0.83133084,0.6013453,1.102613,0.14092648,1.102613,"up","USP54",159195,"0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation","","0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation","chr10:75258052-75313098 (-) // 92.84 // q22.2"]
["11729640_at",0.2118988,-0.04419899,-0.09024048,0.044198513,0.063399315,-0.09115887,0.9486034,0.856942,1.0141985,0.020340106,1.0141985,"up","C12orf43",64897,"","","","chr12:121440678-121454304 (-) // 77.3 // q24.31"]
["11731165_at",0.024990082,-0.024990082,-0.034074306,-0.5141554,0.10841894,0.18949604,0.924636,0.798899,1.0429876,0.060721986,1.0429876,"up","FGF19",9965,"0001755 // neural crest cell migration // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from genetic interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from physical interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0046326 // positive regulation of glucose import // inferred from direct assay /// 0046330 // positive regulation of JNK cascade // inferred from direct assay /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0070858 // negative regulation of bile acid biosynthetic process // inferred from direct assay","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation","0005104 // fibroblast growth factor receptor binding // inferred from physical interaction /// 0005104 // fibroblast growth factor receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation","chr11:69513005-69519410 (-) // 93.09 // q13.3"]
["11758435_s_at",-0.008739471,0.062454224,-0.0050354004,-0.046239853,0.025138855,0.0050354004,0.79009926,0.529861,1.0150717,0.021581708,1.0150717,"up","OGFOD1",55239,"0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0005506 // iron ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from electronic annotation /// 0031418 // L-ascorbic acid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:56510888-56511406 (+) // 66.8 // q12.2"]
["11728625_a_at",0.13156366,-0.2400384,-0.10937452,0.1348505,-0.06985283,0.06985283,0.7011375,0.39836818,-1.0849034,-0.11756653,1.0849034,"down","SLC22A12",116085,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015747 // urate transport // inferred from direct assay /// 0015747 // urate transport // inferred from electronic annotation /// 0019725 // cellular homeostasis // non-traceable author statement /// 0042493 // response to drug // inferred from direct assay /// 0046415 // urate metabolic process // inferred from mutant phenotype /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from direct assay /// 0031526 // brush border membrane // inferred from sequence or structural similarity /// 0031526 // brush border membrane // non-traceable author statement /// 0031526 // brush border membrane // inferred from electronic annotation","0015143 // urate transmembrane transporter activity // inferred from direct assay /// 0015143 // urate transmembrane transporter activity // inferred from electronic annotation /// 0022857 // transmembrane transporter activity // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from physical interaction","chr11:64358281-64369816 (+) // 98.1 // q13.1"]
["11721922_at",0.10203409,-0.07146788,-0.016498089,-0.26569605,0.016498089,0.2805853,0.99133104,0.9738962,-1.0040096,-0.0057730703,1.0040096,"down","PRKCB",5579,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010829 // negative regulation of glucose transport // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0035408 // histone H3-T6 phosphorylation // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042113 // B cell activation // inferred from sequence or structural similarity /// 0042953 // lipoprotein transport // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from sequence or structural similarity /// 0045766 // positive regulation of angiogenesis // inferred from sequence or structural similarity /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0050853 // B cell receptor signaling pathway // inferred from sequence or structural similarity /// 0050861 // positive regulation of B cell receptor signaling pathway // inferred from sequence or structural similarity /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004697 // protein kinase C activity // inferred from electronic annotation /// 0004697 // protein kinase C activity // traceable author statement /// 0005080 // protein kinase C binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from mutant phenotype /// 0035403 // histone kinase activity (H3-T6 specific) // inferred from direct assay /// 0042393 // histone binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050681 // androgen receptor binding // inferred from direct assay","chr16:23846527-24231932 (+) // 90.25 // p12.2"]
["11728295_a_at",0.0071721077,-0.11066151,-0.0071725845,-0.12835312,0.037938595,0.18417788,0.7862379,0.52358556,-1.0483655,-0.06814174,1.0483655,"down","PKIG",11142,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0042308 // negative regulation of protein import into nucleus // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation","0004860 // protein kinase inhibitor activity // inferred from electronic annotation /// 0004862 // cAMP-dependent protein kinase inhibitor activity // inferred from electronic annotation /// 0004862 // cAMP-dependent protein kinase inhibitor activity // traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation","chr20:43160435-43247678 (+) // 93.54 // q13.12"]
["11725952_at",0.016145706,-0.060664654,0.010755539,0.1301508,-0.010755539,-0.06507492,0.86493516,0.66650534,-1.0205601,-0.029361207,1.0205601,"down","RNF10",9921,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0010626 // negative regulation of Schwann cell proliferation // inferred from sequence or structural similarity /// 0031643 // positive regulation of myelination // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:120972127-121015396 (+) // 93.91 // q24.31"]
["11746231_x_at",0.18680573,-0.05306673,0,0.06696081,-0.08317757,0,0.82321006,0.58690566,1.0352544,0.04998528,1.0352544,"up","ZMYM6",9204,"0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0007275 // multicellular organismal development // traceable author statement /// 0022604 // regulation of cell morphogenesis // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:35482849-35497569 (-) // 78.02 // p34.3"]
["11748175_x_at",0.32139778,0.092990875,0.13320255,-0.092990875,-0.33329916,-0.38747454,0.14853846,0.016706077,1.3696291,0.4537853,1.3696291,"up","C19orf54",284325,"","","","chr19:41246766-41256458 (-) // 76.86 // q13.2"]
["11756780_a_at",-0.11930919,0.041583538,0.032260418,-0.032260656,-0.07563448,0.10232687,0.95267034,0.8674614,-1.0092608,-0.013298987,1.0092608,"down","MS4A7",58475,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr11:60146004-60157458 (+) // 99.89 // q12.2"]
["11749752_x_at",0.13626432,0.12027407,-0.09174633,-0.16838169,0.062897205,-0.062897205,0.643427,0.32620102,1.08002,0.11105796,1.08002,"up","WIPF1",7456,"0006461 // protein complex assembly // traceable author statement /// 0008154 // actin polymerization or depolymerization // traceable author statement /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030048 // actin filament-based movement // inferred from electronic annotation /// 0046827 // positive regulation of protein export from nucleus // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005884 // actin filament // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0003779 // actin binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005522 // profilin binding // traceable author statement","chr2:175426773-175499312 (-) // 94.99 // q31.1"]
["11752288_a_at",-0.0056447983,0.017499924,0.0056447983,-0.02459526,-0.03418398,0.08180237,0.98760605,0.96345323,-1.001277,-0.0018411028,1.001277,"down","FAM125B",89853,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005768 // endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","","chr9:129089147-129269319 (+) // 92.91 // q33.3"]
["11722711_a_at",0.10657835,-0.22957087,-0.059515953,0.22736454,0.059515953,-0.100702286,0.7137339,0.4160305,-1.0889182,-0.12289559,1.0889182,"down","PPOX",5498,"0006778 // porphyrin-containing compound metabolic process // traceable author statement /// 0006779 // porphyrin-containing compound biosynthetic process // inferred from direct assay /// 0006779 // porphyrin-containing compound biosynthetic process // inferred from electronic annotation /// 0006782 // protoporphyrinogen IX biosynthetic process // inferred from electronic annotation /// 0006783 // heme biosynthetic process // inferred from direct assay /// 0006783 // heme biosynthetic process // traceable author statement /// 0006783 // heme biosynthetic process // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046501 // protoporphyrinogen IX metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031304 // intrinsic to mitochondrial inner membrane // inferred from sequence or structural similarity /// 0031304 // intrinsic to mitochondrial inner membrane // inferred from electronic annotation /// 0031305 // integral to mitochondrial inner membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from mutant phenotype","0000166 // nucleotide binding // inferred from electronic annotation /// 0004729 // oxygen-dependent protoporphyrinogen oxidase activity // inferred from direct assay /// 0004729 // oxygen-dependent protoporphyrinogen oxidase activity // traceable author statement /// 0004729 // oxygen-dependent protoporphyrinogen oxidase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // traceable author statement","chr1:161136170-161141008 (+) // 97.26 // q23.3"]
["11737448_x_at",0.02250576,0.09866905,0.064468384,-0.15106583,-0.027022362,-0.02250576,0.26598904,0.05361245,1.0933428,0.12874578,1.0933428,"up","DNAJC22",79962,"0006457 // protein folding // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0031072 // heat shock protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr12:49741040-49745927 (+) // 82.77 // q13.12"]
["11744111_a_at",0.3579359,-0.21345949,-0.16426039,0.057741642,0.049378872,-0.049378872,0.96287847,0.89623004,-1.0180736,-0.025841804,1.0180736,"down","KIAA0195",9772,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr17:73452247-73496532 (+) // 98.87 // q25.1"]
["11738683_a_at",0.08402252,0.036154747,-0.021274567,0.021274567,-0.09502697,-0.126297,0.43023744,0.14005685,1.071514,0.09965071,1.071514,"up","NARR /// RAB34","100861437 /// 83871","0006184 // GTP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0001726 // ruffle // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation","chr17:27041302-27045286 (-) // 92.63 // q11.2"]
["11758713_s_at",-0.22196913,0.048591137,-0.048591137,-0.14114761,0.2370243,0.0636673,0.7020725,0.39931217,-1.09215,-0.12717098,1.09215,"down","RP1L1",94137,"0007601 // visual perception // inferred from electronic annotation /// 0030030 // cell projection organization // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042461 // photoreceptor cell development // inferred from sequence or structural similarity /// 0042461 // photoreceptor cell development // inferred from electronic annotation /// 0045494 // photoreceptor cell maintenance // inferred from sequence or structural similarity /// 0045494 // photoreceptor cell maintenance // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0001750 // photoreceptor outer segment // inferred from sequence or structural similarity /// 0001750 // photoreceptor outer segment // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0032391 // photoreceptor connecting cilium // inferred from sequence or structural similarity /// 0032391 // photoreceptor connecting cilium // inferred from electronic annotation /// 0035085 // cilium axoneme // inferred from sequence or structural similarity /// 0035085 // cilium axoneme // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr8:10463858-10464350 (-) // 99.59 // p23.1"]
["11733680_a_at",0.033173084,-0.079288244,-0.033173084,-0.17340636,0.22771001,0.24314737,0.7174275,0.42104477,-1.0909461,-0.12557979,1.0909461,"down","TMEM132D",121256,"0010923 // negative regulation of phosphatase activity // inferred from direct assay","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr12:129556275-130388213 (-) // 96.87 // q24.33"]
["11717282_at",0.37180328,0.114053726,-0.016540527,0.016540527,-0.29737186,-0.37239075,0.33738834,0.08587177,1.2961023,0.37417957,1.2961023,"up","ASAP1",50807,"0007165 // signal transduction // inferred from electronic annotation /// 0030030 // cell projection organization // inferred from electronic annotation /// 0032312 // regulation of ARF GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0046847 // filopodium assembly // inferred from electronic annotation /// 0060271 // cilium morphogenesis // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008060 // ARF GTPase activator activity // inferred from electronic annotation /// 0008093 // cytoskeletal adaptor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:131064352-131456099 (-) // 98.96 // q24.21"]
["11719471_at",-0.032949448,-0.17176008,-0.2444663,0.032949924,0.06275797,0.15122938,0.20395502,0.031505074,-1.1744926,-0.23203762,1.1744926,"down","DCP1A",55802,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from electronic annotation /// 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement","0000932 // cytoplasmic mRNA processing body // inferred from sequence or structural similarity /// 0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction","chr3:53317442-53381654 (-) // 94.34 // p21.1"]
["11725778_a_at",-0.094522476,0.03451252,0.021204472,-0.03793955,-0.021204472,0.059946537,0.9289612,0.8082062,-1.0091934,-0.013202705,1.0091934,"down","PRDM2",7799,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0032259 // methylation // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0034968 // histone lysine methylation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:14031108-14151574 (+) // 96.38 // p36.21"]
["11736330_a_at",-0.07741213,0.024487972,0.028416634,-0.1214838,0.1097002,-0.024487972,0.9867506,0.96104056,1.0027218,0.0039213737,1.0027218,"up","SLC2A11",66035,"0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0022857 // transmembrane transporter activity // inferred from electronic annotation /// 0022891 // substrate-specific transmembrane transporter activity // inferred from electronic annotation","chr22:24198889-24227723 (+) // 78.5 // q11.23"]
["11763398_at",-0.0824523,-0.02222395,-0.01181078,0.013756752,0.035433292,0.01181078,0.29088002,0.06391175,-1.0418608,-0.05916256,1.0418608,"down","LOC100507254",100507254,"","","","chr6:132455549-132490502 (+) // 98.24 // q23.2"]
["11725986_s_at",0.099357605,0.009413719,-0.006426811,0.0064258575,-0.09802055,-0.08345318,0.3935959,0.11700281,1.0661896,0.092464074,1.0661896,"up","NONO",4841,"0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006397 // mRNA processing // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0042382 // paraspeckles // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction","chrX:70503041-70521016 (+) // 85.38 // q13.1"]
["11735076_a_at",0.056181908,-0.06563139,-0.13059235,0.06371021,-0.056181908,0.1217432,0.62167084,0.30169192,-1.0642014,-0.089771144,1.0642014,"down","CYP2C18",1562,"0006805 // xenobiotic metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004497 // monooxygenase activity // traceable author statement /// 0004497 // monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0008390 // testosterone 16-alpha-hydroxylase activity // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0019825 // oxygen binding // traceable author statement /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070330 // aromatase activity // inferred from electronic annotation","chr10:96443250-96495945 (+) // 94.18 // q23.33"]
["11718009_a_at",0.20694828,-0.0318141,0.03181362,0.16587496,-0.071602345,-0.06250954,0.83491683,0.60941577,1.0413066,0.058394935,1.0413066,"up","STX18",53407,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005484 // SNAP receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr4:4420667-4543790 (-) // 98.24 // p16.3"]
["11721657_at",-0.12920284,0.061998367,0.039746284,0.03705311,-0.090937614,-0.03705311,0.91701293,0.7800968,1.0147749,0.021159766,1.0147749,"up","LMO4",8543,"0001843 // neural tube closure // inferred from sequence or structural similarity /// 0001843 // neural tube closure // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0021514 // ventral spinal cord interneuron differentiation // inferred from electronic annotation /// 0021522 // spinal cord motor neuron differentiation // inferred from electronic annotation /// 0021527 // spinal cord association neuron differentiation // inferred from electronic annotation /// 0031333 // negative regulation of protein complex assembly // inferred from electronic annotation /// 0042659 // regulation of cell fate specification // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048538 // thymus development // inferred from electronic annotation /// 0050865 // regulation of cell activation // inferred from electronic annotation","0005667 // transcription factor complex // inferred from sequence or structural similarity /// 0005667 // transcription factor complex // inferred from electronic annotation","0001158 // enhancer sequence-specific DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from sequence or structural similarity /// 0008134 // transcription factor binding // inferred from sequence or structural similarity /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:87794149-87814604 (+) // 95.44 // p22.3"]
["11748556_a_at",0.081438065,-0.005932331,0.005932808,0.08390617,-0.029315472,-0.15437603,0.7449377,0.46044526,1.0427606,0.060407992,1.0427606,"up","SARNP",84324,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003676 // nucleic acid binding // non-traceable author statement /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0050733 // RS domain binding // inferred from electronic annotation","chr12:56146365-56197514 (-) // 86.72 // q13.2"]
["11755029_a_at",-0.13616705,0.083042145,-0.022258759,-0.17941809,0.15350485,0.022258759,0.944832,0.8463415,-1.016711,-0.023909647,1.016711,"down","C17orf28",283987,"","0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","","chr17:72946837-72951440 (-) // 86.35 // q25.1"]
["11738454_at",-0.1575799,-0.30502033,0.021623373,0.3030274,-0.021623373,0.30193305,0.31640008,0.07603598,-1.2670188,-0.34143794,1.2670188,"down","ACTBL2",345651,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation","chr5:56775842-56778638 (-) // 99.29 // q11.2"]
["11753326_a_at",-0.30549145,0.1368208,-0.01193428,-0.23497438,0.01193428,0.34069872,0.8634265,0.6626333,-1.0713435,-0.09942117,1.0713435,"down","GPR157",80045,"0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation","chr1:9164389-9189183 (-) // 99.8 // p36.23"]
["11729288_at",-0.10050964,-0.11990595,-0.05957222,0.10320473,0.059571743,0.27846336,0.18343636,0.02550172,-1.1813277,-0.24040923,1.1813277,"down","MSL3",10943,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0043984 // histone H4-K16 acetylation // inferred from direct assay","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0072487 // MSL complex // inferred from direct assay","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0035064 // methylated histone residue binding // inferred from direct assay","chrX:11776277-11786410 (+) // 71.57 // p22.2"]
["11735174_a_at",0.17942142,0.12588787,0.030797005,-0.26722336,-0.26188564,-0.030797005,0.19407171,0.028646156,1.2300106,0.29867077,1.2300106,"up","IL32",9235,"0006952 // defense response // traceable author statement /// 0006955 // immune response // traceable author statement /// 0007155 // cell adhesion // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement","0005125 // cytokine activity // inferred from electronic annotation","chr16:3115639-3119820 (+) // 71.35 // p13.3"]
["11728854_at",-0.24428844,-0.010825634,0.3465278,-0.10377383,0.044570208,0.010825634,0.9279588,0.8059593,1.0328261,0.046597317,1.0328261,"up","C2orf77",129881,"","","","chr2:170501934-170550933 (-) // 88.08 // q31.1"]
["11755204_s_at",0.017865658,0.051740646,-0.12105751,-0.017865658,-0.13219261,0.024872303,0.9030958,0.7454974,1.0171824,0.024578333,1.0171824,"up","CTAG2",30848,"","0005813 // centrosome // inferred from direct assay","","chrX:153880251-153881590 (-) // 91.31 // q28"]
["11727129_at",-0.22821736,0.07255864,-0.15636516,0.0611248,-0.0611248,0.08148551,0.5836969,0.26397824,-1.0951813,-0.13116978,1.0951813,"down","MAGEB2",4113,"","","","chrX:30233686-30238204 (+) // 97.86 // p21.2"]
["11744870_a_at",-0.0168252,-0.06842756,0.12681961,0.0168252,0.14816618,-0.020763397,0.87282103,0.6823183,-1.0240033,-0.03422032,1.0240033,"down","SLC1A6",6511,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006835 // dicarboxylic acid transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0015810 // aspartate transport // traceable author statement /// 0015813 // L-glutamate transport // traceable author statement /// 0015813 // L-glutamate transport // inferred from electronic annotation /// 0042391 // regulation of membrane potential // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005313 // L-glutamate transmembrane transporter activity // inferred from electronic annotation /// 0015183 // L-aspartate transmembrane transporter activity // traceable author statement /// 0015293 // symporter activity // inferred from electronic annotation /// 0017153 // sodium:dicarboxylate symporter activity // inferred from electronic annotation","chr19:15060842-15121432 (-) // 99.61 // p13.12"]
["11728427_at",0.02260685,0.040388107,0.06080246,-0.07005978,-0.02260685,-0.13362503,0.18699075,0.026483446,1.0842491,0.1166963,1.0842491,"up","IKBIP",121457,"0006917 // induction of apoptosis // inferred from mutant phenotype /// 0010165 // response to X-ray // inferred from expression pattern","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr12:99017813-99038589 (-) // 70.78 // q23.1"]
["11722169_x_at",0.024108887,0.008688927,0.03670311,-0.008688927,-0.061413765,-0.09522438,0.23412724,0.041578382,1.0557556,0.07827592,1.0557556,"up","CSE1L",1434,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0008262 // importin-alpha export receptor activity // traceable author statement /// 0008565 // protein transporter activity // inferred from electronic annotation","chr20:47662782-47713556 (+) // 99.92 // q13.13"]
["11737176_at",-0.045228004,0.045228004,-0.088950634,0.12756014,-0.049390793,0.25607252,0.5351283,0.21940775,-1.1027182,-0.1410642,1.1027182,"down","C9orf72",203228,"0008219 // cell death // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","","chr9:27560086-27573842 (-) // 78.62 // p21.2"]
["11728731_s_at",-0.0043907166,-0.07621479,-0.045508385,0.15725803,0.08279228,0.0043907166,0.2923273,0.064561166,-1.0893884,-0.12351837,1.0893884,"down","DSCC1",79075,"0006260 // DNA replication // inferred from electronic annotation /// 0006275 // regulation of DNA replication // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0034088 // maintenance of mitotic sister chromatid cohesion // inferred from mutant phenotype /// 0034421 // post-translational protein acetylation // inferred from mutant phenotype","0000775 // chromosome, centromeric region // inferred from direct assay /// 0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr8:120846181-120868262 (-) // 98.91 // q24.12"]
["11753279_a_at",0.17636871,0.032627106,-0.017513275,0.017513275,-0.25386715,-0.22940159,0.37028348,0.103702046,1.1639905,0.21907927,1.1639905,"up","SGK494 /// SPAG5","10615 /// 124923","0000070 // mitotic sister chromatid segregation // inferred from mutant phenotype /// 0000090 // mitotic anaphase // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // non-traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007051 // spindle organization // inferred from mutant phenotype /// 0007051 // spindle organization // non-traceable author statement /// 0007059 // chromosome segregation // inferred from mutant phenotype /// 0007067 // mitosis // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051988 // regulation of attachment of spindle microtubules to kinetochore // inferred from mutant phenotype","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0000922 // spindle pole // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005876 // spindle microtubule // inferred from electronic annotation /// 0035371 // microtubule plus end // inferred from direct assay /// 0072686 // mitotic spindle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr17:26907029-26941203 (-) // 100.0 // q11.2"]
["11740239_a_at",-0.33542013,0.022662163,0.03822422,-0.21464539,-0.022662163,0.19885254,0.8661631,0.6688909,-1.0560608,-0.07869288,1.0560608,"down","C15orf26",161502,"","","","chr15:81426587-81441515 (+) // 98.55 // q25.1"]
["11728261_a_at",-0.16712189,-0.08998871,-0.015871048,0.015871048,0.036338806,0.093738556,0.25080183,0.0477638,-1.1016327,-0.13964331,1.1016327,"down","ZNF300",91975,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:150273960-150284545 (-) // 95.77 // q33.1"]
["11720321_at",0.40337467,0.3005004,-0.12028742,-0.03524065,0.03524065,-0.26619768,0.5103377,0.19901052,1.2169431,0.28326178,1.2169431,"up","AK2",204,"0006139 // nucleobase-containing compound metabolic process // inferred from electronic annotation /// 0015949 // nucleobase-containing small molecule interconversion // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046939 // nucleotide phosphorylation // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // traceable author statement /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004017 // adenylate kinase activity // inferred from electronic annotation /// 0004017 // adenylate kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016776 // phosphotransferase activity, phosphate group as acceptor // inferred from electronic annotation /// 0019201 // nucleotide kinase activity // inferred from electronic annotation /// 0019205 // nucleobase-containing compound kinase activity // inferred from electronic annotation","chr1:33473540-33502508 (-) // 80.89 // p35.1"]
["11750357_a_at",0.025074005,0.3559723,-0.016858578,-0.17494917,-0.092505455,0.016858578,0.5000734,0.19099878,1.1526288,0.20492795,1.1526288,"up","ETNK2",55224,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0001890 // placenta development // inferred from electronic annotation /// 0006646 // phosphatidylethanolamine biosynthetic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0004305 // ethanolamine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation","chr1:204100607-204116088 (-) // 99.86 // q32.1"]
["11724936_a_at",0.4064803,-0.047714233,0.04108286,0.033316612,-0.069179535,-0.033316135,0.64966905,0.33326474,1.1144583,0.15634267,1.1144583,"up","C10orf76",79591,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr10:103605355-103815932 (-) // 92.58 // q24.32"]
["11728287_at",0.003706932,-0.079202175,0.17137384,-0.003706932,-0.09742308,0.049167633,0.8275078,0.59423614,1.0347487,0.049280398,1.0347487,"up","RHOQ",23433,"0006184 // GTP catabolic process // inferred from direct assay /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // inferred from mutant phenotype /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0030866 // cortical actin cytoskeleton organization // inferred from mutant phenotype /// 0030866 // cortical actin cytoskeleton organization // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from mutant phenotype /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0032956 // regulation of actin cytoskeleton organization // inferred by curator /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0046326 // positive regulation of glucose import // inferred from mutant phenotype /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051491 // positive regulation of filopodium assembly // inferred from direct assay /// 0090005 // negative regulation of establishment of protein localization in plasma membrane // inferred from mutant phenotype /// 0090005 // negative regulation of establishment of protein localization in plasma membrane // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005884 // actin filament // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0005522 // profilin binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0032427 // GBD domain binding // inferred from physical interaction","chr2:46769866-46811950 (+) // 93.44 // p21"]
["11763509_at",-0.49156713,-0.012021542,0.012021542,0.056093693,0.35694027,-0.22212648,0.69176906,0.38639355,-1.1707975,-0.22749153,1.1707975,"down","CD9",928,"0002576 // platelet degranulation // traceable author statement /// 0006928 // cellular component movement // inferred from direct assay /// 0007155 // cell adhesion // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007338 // single fertilization // inferred from electronic annotation /// 0007342 // fusion of sperm to egg plasma membrane // inferred from direct assay /// 0007342 // fusion of sperm to egg plasma membrane // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009414 // response to water deprivation // inferred from electronic annotation /// 0014003 // oligodendrocyte development // inferred from electronic annotation /// 0030168 // platelet activation // non-traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030913 // paranodal junction assembly // inferred from sequence or structural similarity /// 0030913 // paranodal junction assembly // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // non-traceable author statement /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0031092 // platelet alpha granule membrane // traceable author statement","0005178 // integrin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr12:6313523-6315324 (+) // 88.78 // p13.31"]
["11761258_at",0.22295856,0.009321213,0.27098846,-0.025513649,-0.13742232,-0.009321213,0.29665434,0.066513754,1.1689191,0.22517507,1.1689191,"up","EDIL3",10085,"0007155 // cell adhesion // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0010811 // positive regulation of cell-substrate adhesion // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0005178 // integrin binding // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation","chr5:83343234-83374658 (-) // 95.83 // q14.3"]
["11722646_a_at",-0.152349,0.18731022,0.075730085,-0.018816948,0.01881671,-0.1515646,0.7586833,0.48060328,1.0624675,0.08741865,1.0624675,"up","MYL1",4632,"0006936 // muscle contraction // inferred from direct assay /// 0007517 // muscle organ development // non-traceable author statement /// 0030049 // muscle filament sliding // non-traceable author statement /// 0030049 // muscle filament sliding // traceable author statement /// 0060048 // cardiac muscle contraction // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0005859 // muscle myosin complex // non-traceable author statement /// 0016459 // myosin complex // inferred from electronic annotation /// 0030016 // myofibril // inferred from direct assay /// 0030017 // sarcomere // non-traceable author statement /// 0043292 // contractile fiber // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation /// 0008307 // structural constituent of muscle // non-traceable author statement","chr2:211154315-211179921 (-) // 90.37 // q34"]
["11750627_a_at",0.053495407,0.078196526,0.02782917,-0.02782917,-0.15408039,-0.13210106,0.15879777,0.019147677,1.1156186,0.15784387,1.1156186,"up","HSPA4L",22824,"0006457 // protein folding // inferred from sequence or structural similarity /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // inferred from sequence or structural similarity /// 0006986 // response to unfolded protein // traceable author statement","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation","chr4:128702975-128754197 (+) // 99.8 // q28.1"]
["11755064_x_at",-0.07168341,0.06512785,-0.0108447075,-0.040893555,0.010844231,0.0487895,0.9304701,0.8117007,-1.0083852,-0.012046822,1.0083852,"down","ZNF669",79862,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:247261405-247267663 (-) // 85.93 // q44"]
["11742804_a_at",0.06460142,-0.015998363,-0.073245525,0.06696367,-0.19065285,0.015998363,0.9132635,0.76964104,1.0193735,0.027682805,1.0193735,"up","TEX261",113419,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:71213071-71222075 (-) // 65.11 // p13.3"]
["11735540_at",-0.2762022,0.011861324,0.016564846,-0.19472313,0.117640495,-0.011861324,0.8862543,0.71009195,-1.0373797,-0.0529441,1.0373797,"down","WEE2",494551,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007126 // meiosis // inferred from electronic annotation /// 0007128 // meiotic prophase I // inferred from sequence or structural similarity /// 0007128 // meiotic prophase I // inferred from electronic annotation /// 0007137 // meiotic metaphase II // inferred from sequence or structural similarity /// 0007137 // meiotic metaphase II // inferred from electronic annotation /// 0007143 // female meiosis // inferred from sequence or structural similarity /// 0007143 // female meiosis // inferred from electronic annotation /// 0007343 // egg activation // inferred from sequence or structural similarity /// 0007343 // egg activation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0035038 // female pronucleus assembly // inferred from sequence or structural similarity /// 0035038 // female pronucleus assembly // inferred from electronic annotation /// 0060283 // negative regulation of oocyte development // inferred from sequence or structural similarity /// 0060283 // negative regulation of oocyte development // inferred from electronic annotation /// 0060631 // regulation of meiosis I // inferred from sequence or structural similarity /// 0060631 // regulation of meiosis I // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:141408152-141431071 (+) // 99.74 // q34"]
["11737813_s_at",-0.19734955,-0.15082645,-0.12225628,0.12225628,0.4422617,0.13639832,0.16874985,0.02156732,-1.3108017,-0.3904495,1.3108017,"down","NNT",23530,"0006099 // tricarboxylic acid cycle // traceable author statement /// 0015992 // proton transport // traceable author statement /// 0015992 // proton transport // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005746 // mitochondrial respiratory chain // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003957 // NAD(P)+ transhydrogenase (B-specific) activity // traceable author statement /// 0008746 // NAD(P)+ transhydrogenase activity // not recorded /// 0008750 // NAD(P)+ transhydrogenase (AB-specific) activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0050661 // NADP binding // inferred from direct assay /// 0050661 // NADP binding // inferred from electronic annotation /// 0051287 // NAD binding // traceable author statement","chr5:43603228-43705667 (+) // 99.57 // p12"]
["11739336_at",-0.08722687,-0.10993862,0.08722687,-0.13108635,0.16929817,0.10980511,0.75942093,0.48165074,-1.0614123,-0.08598522,1.0614123,"down","SCYL2",55681,"0002092 // positive regulation of receptor internalization // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0008333 // endosome to lysosome transport // inferred from direct assay /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from direct assay /// 2000286 // receptor internalization involved in canonical Wnt receptor signaling pathway // inferred from direct assay /// 2000370 // positive regulation of clathrin-mediated endocytosis // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0004672 // protein kinase activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr12:100661049-100735493 (+) // 99.02 // q23.1"]
["11747674_a_at",-0.40585423,-0.27842093,0.0050706863,0.074920654,-0.0050706863,0.15655708,0.327024,0.081105106,-1.2327417,-0.30187055,1.2327417,"down","ATP1A2",477,"0001504 // neurotransmitter uptake // inferred from electronic annotation /// 0002026 // regulation of the force of heart contraction // inferred from electronic annotation /// 0002087 // regulation of respiratory gaseous exchange by neurological system process // inferred from electronic annotation /// 0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006813 // potassium ion transport // non-traceable author statement /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // non-traceable author statement /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006937 // regulation of muscle contraction // inferred from electronic annotation /// 0006940 // regulation of smooth muscle contraction // inferred from electronic annotation /// 0006942 // regulation of striated muscle contraction // non-traceable author statement /// 0006942 // regulation of striated muscle contraction // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0008542 // visual learning // inferred from electronic annotation /// 0015672 // monovalent inorganic cation transport // inferred from electronic annotation /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0019229 // regulation of vasoconstriction // inferred from electronic annotation /// 0034220 // ion transmembrane transport // traceable author statement /// 0040011 // locomotion // inferred from electronic annotation /// 0045822 // negative regulation of heart contraction // inferred from electronic annotation /// 0045988 // negative regulation of striated muscle contraction // inferred from electronic annotation /// 0051481 // reduction of cytosolic calcium ion concentration // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005890 // sodium:potassium-exchanging ATPase complex // inferred by curator /// 0005890 // sodium:potassium-exchanging ATPase complex // inferred from electronic annotation /// 0005901 // caveola // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005391 // sodium:potassium-exchanging ATPase activity // inferred from mutant phenotype /// 0005391 // sodium:potassium-exchanging ATPase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0015077 // monovalent inorganic cation transmembrane transporter activity // inferred from electronic annotation /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0019829 // cation-transporting ATPase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:160098175-160111248 (+) // 94.74 // q23.2"]
["11753176_a_at",0.22501516,0.031610012,0.113285065,-0.44246864,-0.031609535,-0.099663734,0.33804166,0.08631496,1.2436243,0.31455073,1.2436243,"up","GTPBP3",84705,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0006400 // tRNA modification // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr19:17448367-17452101 (+) // 79.39 // p13.11"]
["11736843_a_at",-0.057394505,-0.017429113,-0.08858967,0.16247225,0.028898716,0.017428875,0.30649194,0.07141861,-1.0898057,-0.12407097,1.0898057,"down","KLRAP1",10748,"0007166 // cell surface receptor signaling pathway // traceable author statement","0005886 // plasma membrane // traceable author statement","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // traceable author statement","chr12:10741055-10752661 (-) // 68.51 // p13.2"]
["11732641_a_at",-0.26299095,-0.07585859,0.07585859,0.33393812,0.21912241,-0.16536856,0.61466473,0.29462096,-1.162229,-0.21689428,1.162229,"down","JKAMP",51528,"0006986 // response to unfolded protein // inferred from electronic annotation /// 0030433 // ER-associated protein catabolic process // inferred from direct assay","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr14:59951160-59972080 (+) // 94.2 // q23.1"]
["11743134_x_at",0.14546824,0.19104767,0.011509895,-0.013444424,-0.18279791,-0.0115094185,0.31871566,0.07708667,1.1370212,0.18525913,1.1370212,"up","FKBP8",23770,"0000413 // protein peptidyl-prolyl isomerization // not recorded /// 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0001708 // cell fate specification // inferred from electronic annotation /// 0006457 // protein folding // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007224 // smoothened signaling pathway // inferred from electronic annotation /// 0009953 // dorsal/ventral pattern formation // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0018208 // peptidyl-proline modification // not recorded /// 0021904 // dorsal/ventral neural tube patterning // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0030510 // regulation of BMP signaling pathway // inferred from electronic annotation /// 0030513 // positive regulation of BMP signaling pathway // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0035556 // intracellular signal transduction // traceable author statement /// 0043010 // camera-type eye development // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005622 // intracellular // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005740 // mitochondrial envelope // not recorded /// 0005740 // mitochondrial envelope // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // not recorded /// 0030176 // integral to endoplasmic reticulum membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","0003755 // peptidyl-prolyl cis-trans isomerase activity // not recorded /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005528 // FK506 binding // not recorded /// 0016853 // isomerase activity // inferred from electronic annotation","chr19:18642572-18652807 (-) // 83.5 // p13.11"]
["11745058_a_at",0.010604858,0.026177406,0.066441536,-0.010604858,-0.07747078,-0.12953568,0.25426522,0.048941053,1.0769453,0.10694498,1.0769453,"up","CDYL",9425,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007283 // spermatogenesis // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016573 // histone acetylation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation","chr6:4706392-4955307 (+) // 97.46 // p25.1"]
["AFFX-M27830_3_at",-0.15960741,-0.17288542,-0.016792774,0.031889915,0.016792774,0.0665822,0.232375,0.04104139,-1.1133059,-0.15485008,1.1133059,"down",0.031889915,0.016792774,0.0665822,-0.15960741,-0.17288542,-0.016792774]
["11715155_s_at",-0.03200817,0.25034142,0.03200817,-0.16936398,-0.036112785,0.056734085,0.6045418,0.2845531,1.0965929,0.13302805,1.0965929,"up","TUBB7P /// TUBB8 /// TUBBP5","347688 /// 56604 /// 643224","0006184 // GTP catabolic process // inferred from electronic annotation /// 0007017 // microtubule-based process // inferred from electronic annotation /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0051258 // protein polymerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr16:90160430-90162597 (+) // 96.63 // q24.3 /// chr9:141069510-141071716 (+) // 93.18 // q34.3 /// chr10:92996-95178 (-) // 96.78 // p15.3 /// chr18:47389-49557 (-) // 94.68 // p11.32"]
["11750934_a_at",-0.3538227,-0.013856888,0.013856888,0.18314743,0.17654085,-0.07978439,0.53944874,0.22282451,-1.1576846,-0.21124221,1.1576846,"down","C9orf174 /// LOC100499484 /// LOC100499484-C9ORF174","100499483 /// 100499484 /// 57653","","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr9:100000764-100058282 (+) // 98.16 // q22.33"]
["11740917_at",-0.33442307,-0.051950455,0.10728407,-0.36751127,0.051950455,0.22760057,0.9192473,0.7853285,-1.0451498,-0.06370974,1.0451498,"down","WDFY3",23001,"","0005635 // nuclear envelope // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005776 // autophagic vacuole // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0019898 // extrinsic to membrane // inferred from direct assay /// 0044444 // cytoplasmic part // inferred from direct assay","0003831 // beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005545 // 1-phosphatidylinositol binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:85729984-85887503 (-) // 93.14 // q21.23"]
["11742296_x_at",-0.043081522,0.17689896,-0.08266258,-0.035151005,0.035151005,0.27353,0.81950474,0.5806132,-1.0527225,-0.074125126,1.0527225,"down","POU1F1",5449,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0001102 // RNA polymerase II activating transcription factor binding // inferred from physical interaction /// 0001105 // RNA polymerase II transcription coactivator activity // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr3:87308782-87325737 (-) // 99.93 // p11.2"]
["11720879_a_at",0.3488617,-0.01908207,0.019081593,0.03959942,-0.21342564,-0.1923542,0.47044265,0.16896696,1.1796404,0.23834714,1.1796404,"up","CABIN1",23523,"0007166 // cell surface receptor signaling pathway // non-traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0060548 // negative regulation of cell death // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016235 // aggresome // inferred from direct assay","0004864 // protein phosphatase inhibitor activity // non-traceable author statement /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0030346 // protein phosphatase 2B binding // inferred from electronic annotation","chr22:24407911-24574596 (+) // 97.09 // q11.23"]
["11715326_s_at",0.011794567,-0.011794567,-0.19898319,-0.3349781,0.16753721,0.24064398,0.863321,0.66248244,-1.064908,-0.090728834,1.064908,"down","VSTM5",387804,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:93553734-93583668 (-) // 100.0 // q21"]
["11737998_a_at",0.035522938,-0.07550907,0.005991459,-0.3086481,-0.0059919357,0.20149088,0.95409673,0.8704474,1.0184568,0.02638481,1.0184568,"up","LRRC3",81543,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr21:45875367-45878739 (+) // 73.93 // q22.3"]
["11763722_x_at",0.18945694,0.1375742,-0.027409077,0.008655071,-0.10228872,-0.008655071,0.43668976,0.14409213,1.0973094,0.1339703,1.0973094,"up","SIRT6",51548,"0006471 // protein ADP-ribosylation // inferred from sequence or structural similarity /// 0006471 // protein ADP-ribosylation // traceable author statement /// 0006471 // protein ADP-ribosylation // inferred from electronic annotation /// 0006476 // protein deacetylation // inferred from electronic annotation /// 0010569 // regulation of double-strand break repair via homologous recombination // inferred from direct assay","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005724 // nuclear telomeric heterochromatin // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay","0003950 // NAD+ ADP-ribosyltransferase activity // traceable author statement /// 0003956 // NAD(P)+-protein-arginine ADP-ribosyltransferase activity // inferred from sequence or structural similarity /// 0003956 // NAD(P)+-protein-arginine ADP-ribosyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from sequence or structural similarity /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017136 // NAD-dependent histone deacetylase activity // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046969 // NAD-dependent histone deacetylase activity (H3-K9 specific) // inferred from direct assay /// 0070403 // NAD+ binding // inferred from sequence or structural similarity /// 0070403 // NAD+ binding // inferred from electronic annotation","chr19:4174616-4182559 (-) // 96.03 // p13.3"]
["11762595_at",-0.18559122,-0.15362215,0.043405056,0.14071226,0.015099049,-0.015099049,0.46741837,0.16606432,-1.1061192,-0.1455068,1.1061192,"down","FBN2",2201,"0009653 // anatomical structure morphogenesis // traceable author statement /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030501 // positive regulation of bone mineralization // inferred from sequence or structural similarity /// 0030501 // positive regulation of bone mineralization // inferred from electronic annotation /// 0035108 // limb morphogenesis // inferred from electronic annotation /// 0035583 // sequestering of TGFbeta in extracellular matrix // inferred from sequence or structural similarity /// 0035583 // sequestering of TGFbeta in extracellular matrix // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // inferred from sequence or structural similarity /// 0045669 // positive regulation of osteoblast differentiation // inferred from electronic annotation /// 0060346 // bone trabecula formation // inferred from sequence or structural similarity /// 0060346 // bone trabecula formation // inferred from electronic annotation","0001527 // microfibril // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation","0005201 // extracellular matrix structural constituent // inferred from electronic annotation /// 0005201 // extracellular matrix structural constituent // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation","chr5:127777694-127873916 (-) // 95.43 // q23.3"]
["11754127_a_at",-0.01824379,-0.060196877,-0.17178059,0.085041046,0.01824379,0.075102806,0.24808575,0.046905007,-1.104099,-0.14286958,1.104099,"down","BRMS1",25855,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0009987 // cellular process // inferred from electronic annotation /// 0019987 // negative regulation of anti-apoptosis // inferred from direct assay /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0090312 // positive regulation of protein deacetylation // inferred from direct assay /// 2000210 // positive regulation of anoikis // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0051059 // NF-kappaB binding // inferred from direct assay","chr11:66104978-66112283 (-) // 91.04 // q13.2"]
["11737871_a_at",0.06314993,-0.17322254,-0.04500103,-0.13527298,0.06348419,0.04500103,0.8670222,0.6701897,-1.030084,-0.042762008,1.030084,"down","TMEFF2",23671,"","0005576 // extracellular region // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:192814748-193060435 (-) // 95.42 // q32.3"]
["11741548_a_at",0.19068766,0.12739897,0.14839315,-0.12739897,-0.19860029,-0.13828325,0.029720545,0.00042825454,1.2399261,0.31025413,1.2399261,"up","MBNL1",4154,"0000381 // regulation of alternative nuclear mRNA splicing, via spliceosome // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from sequence or structural similarity /// 0006376 // mRNA splice site selection // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0007399 // nervous system development // inferred from sequence or structural similarity /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from direct assay /// 0008380 // RNA splicing // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from sequence or structural similarity /// 0043484 // regulation of RNA splicing // inferred from direct assay /// 0045445 // myoblast differentiation // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0010494 // cytoplasmic stress granule // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:152016770-152183568 (+) // 98.0 // q25.1"]
["11731039_s_at",-0.013803482,-0.016480446,-0.066633224,0.013803482,0.16306496,0.070596695,0.3038422,0.07009659,-1.0828205,-0.11479415,1.0828205,"down","IL15RA",3601,"0007165 // signal transduction // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0032825 // positive regulation of natural killer cell differentiation // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","0004871 // signal transducer activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004896 // cytokine receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr10:5994334-6020142 (-) // 97.0 // p15.1"]
["11718450_at",0.30576992,0.011931896,-0.067299366,-0.011931896,0.016744614,-0.051845074,0.729707,0.4380048,1.0711384,0.099144876,1.0711384,"up","NAGA",4668,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009311 // oligosaccharide metabolic process // not recorded /// 0016052 // carbohydrate catabolic process // inferred from direct assay /// 0016139 // glycoside catabolic process // not recorded /// 0019377 // glycolipid catabolic process // inferred from mutant phenotype /// 0046477 // glycosylceramide catabolic process // not recorded","0005737 // cytoplasm // not recorded /// 0005764 // lysosome // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds // inferred from electronic annotation /// 0004557 // alpha-galactosidase activity // not recorded /// 0008456 // alpha-N-acetylgalactosaminidase activity // inferred from direct assay /// 0008456 // alpha-N-acetylgalactosaminidase activity // inferred from electronic annotation /// 0008456 // alpha-N-acetylgalactosaminidase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0043169 // cation binding // inferred from electronic annotation","chr22:42454378-42466848 (-) // 95.75 // q13.2"]
["11730703_a_at",-0.005264759,0.005264759,0.1716733,-0.19487333,-0.076417446,0.17323065,0.7745969,0.50430274,1.0643046,0.08991109,1.0643046,"up","PDE4C",5143,"0006198 // cAMP catabolic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0046676 // negative regulation of insulin secretion // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0005929 // cilium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0072372 // primary cilium // inferred from electronic annotation /// 0072372 // primary cilium // inferred from sequence or structural similarity","0003824 // catalytic activity // inferred from electronic annotation /// 0004112 // cyclic-nucleotide phosphodiesterase activity // non-traceable author statement /// 0004114 // 3',5'-cyclic-nucleotide phosphodiesterase activity // non-traceable author statement /// 0004114 // 3',5'-cyclic-nucleotide phosphodiesterase activity // inferred from electronic annotation /// 0004115 // 3',5'-cyclic-AMP phosphodiesterase activity // inferred from electronic annotation /// 0004115 // 3',5'-cyclic-AMP phosphodiesterase activity // traceable author statement /// 0008081 // phosphoric diester hydrolase activity // inferred from electronic annotation /// 0008144 // drug binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:18318771-18344824 (-) // 76.49 // p13.11"]
["11753406_a_at",0.008318424,-0.05467558,-0.105967045,-0.008318424,0.18527937,0.14246464,0.32489267,0.079905525,-1.1151594,-0.15724993,1.1151594,"down","EPHB4",2050,"0001525 // angiogenesis // inferred from sequence or structural similarity /// 0001525 // angiogenesis // inferred from electronic annotation /// 0002042 // cell migration involved in sprouting angiogenesis // inferred from direct assay /// 0003007 // heart morphogenesis // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from direct assay /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048013 // ephrin receptor signaling pathway // inferred from direct assay /// 0048013 // ephrin receptor signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from direct assay /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005003 // ephrin receptor activity // inferred from direct assay /// 0005003 // ephrin receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr7:100414866-100424652 (-) // 100.0 // q22.1"]
["11755166_a_at",0.39991856,0.12685776,0.057103157,-0.057103157,-0.08396149,-0.15231705,0.26765856,0.054192796,1.2246932,0.29242036,1.2246932,"up","ESAM",90952,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","","chr11:124623024-124627433 (-) // 83.1 // q24.2"]
["11724342_s_at",-0.05875492,0.20946789,0.030454636,-0.35599327,-0.030454636,0.39313602,0.93109983,0.81343764,1.041137,0.05815989,1.041137,"up","LGALS7 /// LGALS7B","3963 /// 653499","0006915 // apoptotic process // inferred from electronic annotation /// 0007157 // heterophilic cell-cell adhesion // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0030246 // carbohydrate binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // traceable author statement","chr19:39279921-39282388 (+) // 92.07 // q13.2 /// chr19:39261610-39264077 (-) // 91.95 // q13.2"]
["11734960_at",0.070304394,0.0054171085,-0.03648305,-0.00541687,-0.07624817,0.059013605,0.8818789,0.7005398,1.0144023,0.02062988,1.0144023,"up","TRHDE",29953,"0006508 // proteolysis // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement","0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004177 // aminopeptidase activity // inferred from electronic annotation /// 0004177 // aminopeptidase activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:72666307-73059421 (+) // 97.56 // q21.1"]
["11745399_a_at",-0.019323826,-0.1621244,0.09940553,0.1970253,-0.04166746,0.019323587,0.742833,0.45733067,-1.0611104,-0.08557473,1.0611104,"down","HPSE2",60495,"0005975 // carbohydrate metabolic process // inferred from electronic annotation","0005578 // proteinaceous extracellular matrix // inferred from direct assay /// 0005622 // intracellular // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0030305 // heparanase activity // inferred from direct assay /// 0030305 // heparanase activity // traceable author statement /// 0043169 // cation binding // inferred from electronic annotation /// 0043395 // heparan sulfate proteoglycan binding // inferred from direct assay","chr10:100218876-100995619 (-) // 96.7 // q24.2"]
["11725906_a_at",0.12905025,-0.07758522,0.032961845,-0.032961845,-0.03338647,0.04683256,0.843309,0.62423134,1.0243065,0.034647524,1.0243065,"up","C9orf47",286223,"0001816 // cytokine production // inferred from electronic annotation /// 0003376 // sphingosine-1-phosphate signaling pathway // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0032651 // regulation of interleukin-1 beta production // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0008289 // lipid binding // traceable author statement /// 0038036 // sphingosine-1-phosphate receptor activity // inferred from electronic annotation","chr9:91605777-91619924 (+) // 88.05 // q22.1"]
["11723011_s_at",-0.07429886,-0.008207321,0.061498642,0.08248043,0.008207321,-0.028787613,0.8391299,0.61709476,-1.0193404,-0.027635902,1.0193404,"down","CAPZA2",830,"0006461 // protein complex assembly // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0051693 // actin filament capping // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0008290 // F-actin capping protein complex // inferred from electronic annotation /// 0008290 // F-actin capping protein complex // traceable author statement /// 0015629 // actin cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030863 // cortical cytoskeleton // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation","chr7:116502526-116559399 (+) // 96.47 // q31.2"]
["11744891_at",0.017785072,0.48161983,0.3884821,-0.27459288,-0.05258608,-0.017785072,0.29377362,0.06517287,1.3295614,0.41095033,1.3295614,"up","LOC339803",339803,"","","","chr2:61368324-61372110 (-) // 35.7 // p15"]
["11756616_a_at",-0.28997827,0.015815973,0.019319057,-0.015815973,-0.041501522,0.36737776,0.6408512,0.32335195,-1.1394212,-0.18830118,1.1394212,"down","CNNM1",26507,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr10:101119001-101151628 (+) // 96.58 // q24.2"]
["11728482_a_at",-0.3347435,-0.053310394,-0.034282684,0.034282684,0.11114693,0.07574844,0.3592942,0.097686045,-1.1603056,-0.21450485,1.1603056,"down","ZNF181 /// ZNF302","339318 /// 55900","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:35225077-35233777 (+) // 95.13 // q13.11"]
["11726658_a_at",-0.080711365,0.17163706,-0.048875332,-0.17954016,0.048875332,0.27678776,0.9394054,0.83258,-1.0243373,-0.034690842,1.0243373,"down","ADORA1",134,"0000186 // activation of MAPKK activity // inferred from electronic annotation /// 0001659 // temperature homeostasis // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001973 // adenosine receptor signaling pathway // inferred from electronic annotation /// 0002087 // regulation of respiratory gaseous exchange by neurological system process // inferred from electronic annotation /// 0002674 // negative regulation of acute inflammatory response // inferred from electronic annotation /// 0002686 // negative regulation of leukocyte migration // inferred from electronic annotation /// 0002793 // positive regulation of peptide secretion // inferred from electronic annotation /// 0003093 // regulation of glomerular filtration // inferred from electronic annotation /// 0006612 // protein targeting to membrane // inferred from electronic annotation /// 0006909 // phagocytosis // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0014050 // negative regulation of glutamate secretion // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0032229 // negative regulation of synaptic transmission, GABAergic // inferred from electronic annotation /// 0032244 // positive regulation of nucleoside transport // inferred from electronic annotation /// 0032900 // negative regulation of neurotrophin production // inferred from electronic annotation /// 0035307 // positive regulation of protein dephosphorylation // inferred from electronic annotation /// 0035814 // negative regulation of renal sodium excretion // inferred from electronic annotation /// 0042323 // negative regulation of circadian sleep/wake cycle, non-REM sleep // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043268 // positive regulation of potassium ion transport // inferred from electronic annotation /// 0045741 // positive regulation of epidermal growth factor-activated receptor activity // inferred from electronic annotation /// 0045776 // negative regulation of blood pressure // inferred from electronic annotation /// 0045777 // positive regulation of blood pressure // inferred from electronic annotation /// 0045822 // negative regulation of heart contraction // inferred from electronic annotation /// 0045908 // negative regulation of vasodilation // inferred from electronic annotation /// 0046888 // negative regulation of hormone secretion // inferred from electronic annotation /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0050728 // negative regulation of inflammatory response // inferred from electronic annotation /// 0050890 // cognition // inferred from electronic annotation /// 0050965 // detection of temperature stimulus involved in sensory perception of pain // inferred from electronic annotation /// 0050995 // negative regulation of lipid catabolic process // inferred from electronic annotation /// 0051967 // negative regulation of synaptic transmission, glutamatergic // inferred from electronic annotation /// 0055117 // regulation of cardiac muscle contraction // inferred from electronic annotation /// 0055118 // negative regulation of cardiac muscle contraction // inferred from electronic annotation /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from electronic annotation /// 0060087 // relaxation of vascular smooth muscle // inferred from electronic annotation /// 0070256 // negative regulation of mucus secretion // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0012505 // endomembrane system // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0030673 // axolemma // inferred from electronic annotation /// 0032279 // asymmetric synapse // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043195 // terminal button // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0048786 // presynaptic active zone // inferred from electronic annotation","0001609 // G-protein coupled adenosine receptor activity // inferred from electronic annotation /// 0001664 // G-protein coupled receptor binding // inferred from electronic annotation /// 0001883 // purine nucleoside binding // inferred from electronic annotation /// 0004629 // phospholipase C activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031683 // G-protein beta/gamma-subunit complex binding // inferred from electronic annotation /// 0032795 // heterotrimeric G-protein binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr1:203096832-203136533 (+) // 98.88 // q32.1"]
["11758174_s_at",0.16038656,0.0062446594,-0.0062446594,0.2846837,-0.23108721,-0.22060537,0.81553346,0.5738603,1.078579,0.10913178,1.078579,"up","FAM222B",55731,"","","","chr17:27084407-27085570 (-) // 99.77 // q11.2"]
["11725012_a_at",0.033988953,-0.033988953,-0.36960983,-0.08338022,0.120761395,0.049438477,0.64966077,0.333215,-1.111219,-0.15214324,1.111219,"down","KCNIP3",30818,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007610 // behavior // inferred from electronic annotation /// 0019233 // sensory perception of pain // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0043523 // regulation of neuron apoptotic process // inferred from electronic annotation /// 0048265 // response to pain // inferred from electronic annotation /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005267 // potassium channel activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0048306 // calcium-dependent protein binding // inferred from electronic annotation","chr2:96012475-96051824 (+) // 96.08 // q11.1"]
["11735706_a_at",-0.08035278,0.046377182,-0.009614944,-0.23327255,0.009614944,0.10804176,0.9403473,0.83474743,1.0167806,0.02400843,1.0167806,"up","BSG",682,"0006090 // pyruvate metabolic process // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007566 // embryo implantation // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046689 // response to mercury ion // inferred from electronic annotation /// 0046697 // decidualization // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement /// 0051591 // response to cAMP // inferred from electronic annotation","0000139 // Golgi membrane // traceable author statement /// 0002080 // acrosomal membrane // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0005537 // mannose binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr19:572536-583492 (+) // 97.27 // p13.3"]
["11761304_at",-0.36300778,0.10204601,0.34499645,-0.1088779,-0.102045774,0.37929416,0.9718298,0.92007345,-1.0196768,-0.02811195,1.0196768,"down","CCK",885,"0001662 // behavioral fear response // inferred from electronic annotation /// 0001764 // neuron migration // inferred from sequence or structural similarity /// 0001764 // neuron migration // inferred from electronic annotation /// 0001836 // release of cytochrome c from mitochondria // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from sequence or structural similarity /// 0007409 // axonogenesis // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0032099 // negative regulation of appetite // inferred from electronic annotation /// 0032461 // positive regulation of protein oligomerization // inferred from electronic annotation /// 0042755 // eating behavior // inferred from sequence or structural similarity /// 0042755 // eating behavior // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0051901 // positive regulation of mitochondrial depolarization // inferred from electronic annotation /// 0051930 // regulation of sensory perception of pain // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0030424 // axon // inferred from sequence or structural similarity /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043194 // initial segment // inferred from electronic annotation /// 0043195 // terminal button // inferred from electronic annotation /// 0043203 // axon hillock // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation","0005179 // hormone activity // traceable author statement /// 0005179 // hormone activity // inferred from electronic annotation /// 0005184 // neuropeptide hormone activity // inferred from sequence or structural similarity /// 0005184 // neuropeptide hormone activity // inferred from electronic annotation","chr3:42304246-42306259 (-) // 97.63 // p22.1"]
["11716370_x_at",0.020730972,-0.07628727,-0.0165596,-0.0016040802,0.0016040802,0.116371155,0.58045614,0.26068065,-1.0445119,-0.06282895,1.0445119,"down","FAM89B",23625,"","","","chr11:65339819-65341661 (+) // 88.37 // q13.1"]
["11737204_x_at",-0.14465809,0.21975946,0.03680849,0.03779173,-0.03680849,-0.07601404,0.83190864,0.60250145,1.0441388,0.06231349,1.0441388,"up","MARCH8",220972,"0000209 // protein polyubiquitination // inferred from direct assay /// 0002495 // antigen processing and presentation of peptide antigen via MHC class II // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0045347 // negative regulation of MHC class II biosynthetic process // inferred from electronic annotation","0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0042289 // MHC class II protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:45952816-46090354 (-) // 92.14 // q11.21"]
["11734342_a_at",-0.13221836,0.1496954,0.18028021,-0.042535305,0.021003723,-0.021003723,0.75336105,0.4729378,1.0570894,0.08009746,1.0570894,"up","ZMYM1",79830,"","0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr1:35544963-35581455 (+) // 89.42 // p34.3"]
["11748648_a_at",0.31483603,0.1904006,0.011608601,-0.39439344,-0.24396515,-0.011609077,0.26147032,0.051875878,1.3094288,0.38893762,1.3094288,"up","PTPRR",5801,"0001701 // in utero embryonic development // inferred from expression pattern /// 0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005001 // transmembrane receptor protein tyrosine phosphatase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from sequence or structural similarity /// 0019901 // protein kinase binding // inferred from electronic annotation","chr12:71032025-71182762 (-) // 99.04 // q15"]
["11756779_x_at",0.023638725,0.07442093,0.045983315,-0.024646759,-0.06578255,-0.023638725,0.13168545,0.013095619,1.0614505,0.08603707,1.0614505,"up","JTB",10899,"0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from mutant phenotype /// 0007067 // mitosis // inferred from electronic annotation /// 0033205 // cell cycle cytokinesis // inferred from mutant phenotype /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay","0019901 // protein kinase binding // inferred from direct assay","chr1:153946987-153950013 (-) // 96.61 // q21.3"]
["11716581_a_at",-0.2459526,0.00970459,-0.00970459,-0.05492878,0.025777817,0.16191864,0.61059904,0.29043186,-1.0914454,-0.12624002,1.0914454,"down","G3BP2",9908,"0006810 // transport // inferred from electronic annotation /// 0007253 // cytoplasmic sequestering of NF-kappaB // non-traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007265 // Ras protein signal transduction // non-traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0030159 // receptor signaling complex scaffold activity // non-traceable author statement","chr4:76567766-76598776 (-) // 98.79 // q21.1"]
["11736141_a_at",0.05948162,0.03268242,0.018662453,-0.018662453,-0.32613468,-0.43988037,0.31944206,0.07749518,1.2298661,0.2985013,1.2298661,"up","ITSN1",6453,"0006897 // endocytosis // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042327 // positive regulation of phosphorylation // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048488 // synaptic vesicle endocytosis // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005905 // coated pit // inferred from direct assay /// 0005905 // coated pit // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // non-traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0019209 // kinase activator activity // inferred from electronic annotation /// 0032947 // protein complex scaffold // inferred from direct assay /// 0070064 // proline-rich region binding // inferred from physical interaction","chr21:35014756-35263396 (+) // 98.43 // q22.11"]
["11735123_x_at",-0.09881973,-0.032141685,-0.0051851273,0.025953293,0.0051851273,0.03366089,0.33075166,0.08276994,-1.047523,-0.06698195,1.047523,"down","POLR1E",64425,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0009303 // rRNA transcription // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from sequence or structural similarity /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0030054 // cell junction // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // inferred from electronic annotation","chr9:37485934-37503693 (+) // 82.14 // p13.2"]
["11740022_a_at",-0.017805576,-0.28798294,0.017805576,0.47768927,0.14439249,-0.21714926,0.67006093,0.3581662,-1.1736252,-0.23097178,1.1736252,"down","LRRCC1",85444,"0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005814 // centriole // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","","chr8:86019376-86058315 (+) // 96.78 // q21.2"]
["11742814_s_at",0.30677986,0.06993818,0.22644377,-0.06993818,-0.29060888,-0.14827776,0.15175495,0.01745973,1.2929462,0.37066227,1.2929462,"up","SEMA6A",57556,"0001764 // neuron migration // inferred from electronic annotation /// 0006915 // apoptotic process // non-traceable author statement /// 0007010 // cytoskeleton organization // non-traceable author statement /// 0007166 // cell surface receptor signaling pathway // non-traceable author statement /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // non-traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // non-traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0009887 // organ morphogenesis // non-traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0051642 // centrosome localization // inferred from electronic annotation /// 0071526 // semaphorin-plexin signaling pathway // inferred from electronic annotation /// 2001224 // positive regulation of neuron migration // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // non-traceable author statement","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030215 // semaphorin receptor binding // inferred from electronic annotation","chr5:115779250-115910709 (-) // 96.44 // q23.1"]
["11748315_s_at",0.14092064,0.025485992,0.006849289,-0.006849289,-0.113499165,-0.17405128,0.30912432,0.07270789,1.114105,0.15588519,1.114105,"up","PRNP",5621,"0001933 // negative regulation of protein phosphorylation // inferred from sequence or structural similarity /// 0001933 // negative regulation of protein phosphorylation // inferred from electronic annotation /// 0006878 // cellular copper ion homeostasis // non-traceable author statement /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from sequence or structural similarity /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0008152 // metabolic process // traceable author statement /// 0032689 // negative regulation of interferon-gamma production // inferred from sequence or structural similarity /// 0032689 // negative regulation of interferon-gamma production // inferred from electronic annotation /// 0032700 // negative regulation of interleukin-17 production // inferred from sequence or structural similarity /// 0032700 // negative regulation of interleukin-17 production // inferred from electronic annotation /// 0032703 // negative regulation of interleukin-2 production // inferred from sequence or structural similarity /// 0032703 // negative regulation of interleukin-2 production // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0046007 // negative regulation of activated T cell proliferation // inferred from sequence or structural similarity /// 0046007 // negative regulation of activated T cell proliferation // inferred from electronic annotation /// 0046686 // response to cadmium ion // inferred from electronic annotation /// 0046688 // response to copper ion // inferred from electronic annotation /// 0050860 // negative regulation of T cell receptor signaling pathway // inferred from sequence or structural similarity /// 0050860 // negative regulation of T cell receptor signaling pathway // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0070885 // negative regulation of calcineurin-NFAT signaling cascade // inferred from sequence or structural similarity /// 0070885 // negative regulation of calcineurin-NFAT signaling cascade // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019898 // extrinsic to membrane // traceable author statement /// 0031225 // anchored to membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045121 // membrane raft // inferred from sequence or structural similarity /// 0045121 // membrane raft // inferred from electronic annotation","0005507 // copper ion binding // inferred from direct assay /// 0005507 // copper ion binding // traceable author statement /// 0005507 // copper ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from direct assay /// 0015631 // tubulin binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0043008 // ATP-dependent protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from electronic annotation","chr20:4679854-4681091 (+) // 94.93 // p13"]
["11749684_a_at",0.32105398,-0.014844894,-0.0023007393,0.17695093,-0.0810256,0.0023012161,0.84932077,0.6350022,1.0486699,0.06856067,1.0486699,"up","INTS9",55756,"0016180 // snRNA processing // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0032039 // integrator complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr8:28625274-28747451 (-) // 97.11 // p21.1"]
["11729303_a_at",0.46217585,-0.18213415,0.023416996,-0.023417473,-0.0839591,0.045723915,0.8097983,0.56383747,1.088019,0.12170377,1.088019,"up","UBE3B",89910,"0006464 // cellular protein modification process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // not recorded","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // not recorded /// 0005737 // cytoplasm // not recorded","0004842 // ubiquitin-protein ligase activity // not recorded /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation","chr12:109915206-109974507 (+) // 99.52 // q24.11"]
["11715735_a_at",0.19867611,-0.017217636,0.017217636,0.04241371,-0.099090576,-0.13889503,0.5165031,0.20402892,1.0953683,0.131416,1.0953683,"up","TMEM123",114908,"0070267 // oncosis // inferred from direct assay","0009897 // external side of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // non-traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation","chr11:102267062-102323775 (-) // 92.1 // q22.2"]
["11721835_s_at",0.01591301,-0.0056829453,0.0056829453,0.03530121,-0.07582569,-0.038729668,0.69825774,0.3941456,1.0222318,0.0317224,1.0222318,"up","TMEM14B",81853,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:10747994-10757213 (+) // 96.23 // p24.2"]
["11747123_a_at",-0.082736015,0.20975494,-0.15729785,-0.048321247,0.048321247,0.048321247,0.9397985,0.8331567,-1.0183264,-0.026200058,1.0183264,"down","COCH",1690,"0007605 // sensory perception of sound // inferred from electronic annotation /// 0007605 // sensory perception of sound // traceable author statement /// 0008360 // regulation of cell shape // inferred from mutant phenotype","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr14:31343777-31364260 (+) // 97.08 // q12"]
["11737053_s_at",-0.08483696,-0.06385708,-0.01458931,0.32943344,0.13807678,0.014588356,0.3330351,0.083820075,-1.1608063,-0.21512724,1.1608063,"down","HSPD1",3329,"0002368 // B cell cytokine production // inferred from direct assay /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // inferred from direct assay /// 0002842 // positive regulation of T cell mediated immune response to tumor cell // inferred from direct assay /// 0006200 // ATP catabolic process // inferred from sequence or structural similarity /// 0006457 // protein folding // inferred from electronic annotation /// 0006458 // 'de novo' protein folding // inferred from sequence or structural similarity /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // inferred from direct assay /// 0008219 // cell death // inferred from electronic annotation /// 0032727 // positive regulation of interferon-alpha production // inferred from direct assay /// 0032727 // positive regulation of interferon-alpha production // inferred from electronic annotation /// 0032729 // positive regulation of interferon-gamma production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from sequence or structural similarity /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0032733 // positive regulation of interleukin-10 production // inferred from direct assay /// 0032735 // positive regulation of interleukin-12 production // inferred from direct assay /// 0032755 // positive regulation of interleukin-6 production // inferred from direct assay /// 0042026 // protein refolding // inferred from direct assay /// 0042026 // protein refolding // inferred from electronic annotation /// 0042100 // B cell proliferation // inferred from direct assay /// 0042110 // T cell activation // inferred from direct assay /// 0042110 // T cell activation // inferred from electronic annotation /// 0042113 // B cell activation // inferred from direct assay /// 0043032 // positive regulation of macrophage activation // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0048291 // isotype switching to IgG isotypes // inferred from direct assay /// 0050821 // protein stabilization // inferred from mutant phenotype /// 0050821 // protein stabilization // inferred from sequence or structural similarity /// 0050870 // positive regulation of T cell activation // inferred from direct assay /// 0050870 // positive regulation of T cell activation // inferred from sequence or structural similarity /// 0050870 // positive regulation of T cell activation // inferred from electronic annotation /// 0051131 // chaperone-mediated protein complex assembly // inferred from sequence or structural similarity /// 0051604 // protein maturation // inferred from sequence or structural similarity","0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from sequence or structural similarity /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005905 // coated pit // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0019907 // cyclin-dependent protein kinase activating kinase holoenzyme complex // inferred from direct assay /// 0030135 // coated vesicle // inferred from direct assay /// 0030141 // secretory granule // inferred from sequence or structural similarity /// 0030141 // secretory granule // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0044459 // plasma membrane part // inferred from electronic annotation /// 0046696 // lipopolysaccharide receptor complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0001530 // lipopolysaccharide binding // inferred from direct assay /// 0001530 // lipopolysaccharide binding // inferred from electronic annotation /// 0002039 // p53 binding // inferred from physical interaction /// 0003688 // DNA replication origin binding // inferred from sequence or structural similarity /// 0003697 // single-stranded DNA binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from sequence or structural similarity /// 0043498 // cell surface binding // inferred from direct assay /// 0051082 // unfolded protein binding // inferred by curator /// 0051082 // unfolded protein binding // inferred from sequence or structural similarity /// 0051087 // chaperone binding // inferred from physical interaction","chr2:198351309-198365013 (-) // 94.53 // q33.1"]
["11740882_at",0.036340237,-0.036340237,-0.08152962,-0.09936571,0.06638241,0.10083532,0.7841716,0.52005637,-1.035117,-0.049793888,1.035117,"down","PRSS38",339501,"0006508 // proteolysis // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr1:228003345-228034169 (+) // 98.8 // q42.13"]
["11741731_a_at",0.2521944,0.11424875,-0.062187195,0.062187195,-0.14653444,-0.33826447,0.47904897,0.17496414,1.1828681,0.24228923,1.1828681,"up","FBXO34",55030,"","","","chr14:55738871-55820304 (+) // 92.46 // q22.3"]
["11718164_at",0.12324524,0.1861229,0.264287,-0.12324524,-0.16056728,-0.28998756,0.07697279,0.0041541914,1.3035854,0.3824851,1.3035854,"up","PPP1R15B",84919,"0006417 // regulation of translation // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0006983 // ER overload response // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation","0000164 // protein phosphatase type 1 complex // inferred from electronic annotation","0004722 // protein serine/threonine phosphatase activity // inferred from electronic annotation","chr1:204372502-204380944 (-) // 93.77 // q32.1"]
["11720136_s_at",-0.4338627,-0.12622356,0.036087036,-0.008358955,0.18108273,0.008358955,0.5033124,0.19345865,-1.176929,-0.23502728,1.176929,"down","ATP13A3",79572,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:194123400-194188968 (-) // 98.9 // q29"]
["11756192_a_at",0.074608326,-0.4803772,-0.060769558,0.014398575,0.14224291,-0.014398575,0.6271168,0.30797857,-1.1510314,-0.20292716,1.1510314,"down","CLASP2",23122,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007020 // microtubule nucleation // inferred from mutant phenotype /// 0007026 // negative regulation of microtubule depolymerization // non-traceable author statement /// 0007026 // negative regulation of microtubule depolymerization // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007163 // establishment or maintenance of cell polarity // traceable author statement /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0016477 // cell migration // inferred from electronic annotation /// 0031023 // microtubule organizing center organization // inferred from mutant phenotype /// 0031110 // regulation of microtubule polymerization or depolymerization // inferred from mutant phenotype /// 0032886 // regulation of microtubule-based process // inferred from mutant phenotype /// 0034453 // microtubule anchoring // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005828 // kinetochore microtubule // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation /// 0005881 // cytoplasmic microtubule // inferred from direct assay /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005938 // cell cortex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from direct assay /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from electronic annotation /// 0008107 // galactoside 2-alpha-L-fucosyltransferase activity // non-traceable author statement /// 0051010 // microtubule plus-end binding // inferred from direct assay","chr3:33537736-33546943 (-) // 58.6 // p22.3"]
["11734364_at",0.0365355,0.18227315,-0.17629004,-0.16189265,-0.036535263,0.11953211,0.9148477,0.7746994,1.0284499,0.040471505,1.0284499,"up","RFX3",5991,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031018 // endocrine pancreas development // inferred from sequence or structural similarity /// 0031018 // endocrine pancreas development // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from sequence or structural similarity /// 0042384 // cilium assembly // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048469 // cell maturation // inferred from sequence or structural similarity /// 0048469 // cell maturation // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // inferred from sequence or structural similarity /// 0050796 // regulation of insulin secretion // inferred from electronic annotation /// 0060285 // ciliary cell motility // inferred from sequence or structural similarity /// 0060285 // ciliary cell motility // inferred from electronic annotation /// 0060287 // epithelial cilium movement involved in determination of left/right asymmetry // inferred from sequence or structural similarity /// 0060287 // epithelial cilium movement involved in determination of left/right asymmetry // inferred from electronic annotation /// 0072560 // type B pancreatic cell maturation // inferred from electronic annotation /// 2000078 // positive regulation of type B pancreatic cell development // inferred from sequence or structural similarity /// 2000078 // positive regulation of type B pancreatic cell development // inferred from electronic annotation","0000790 // nuclear chromatin // inferred from direct assay /// 0000790 // nuclear chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005667 // transcription factor complex // inferred by curator","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation","chr9:3247036-3525983 (-) // 87.59 // p24.2"]
["11732117_s_at",0.25640202,0.046073914,0.11829662,-0.046073914,-0.1802969,-0.14308071,0.17498086,0.023126714,1.2003108,0.26340804,1.2003108,"up","KAT7",11143,"0006260 // DNA replication // inferred from direct assay /// 0006260 // DNA replication // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016573 // histone acetylation // inferred from electronic annotation /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0043981 // histone H4-K5 acetylation // inferred from direct assay /// 0043982 // histone H4-K8 acetylation // inferred from direct assay /// 0043983 // histone H4-K12 acetylation // inferred from direct assay /// 0043984 // histone H4-K16 acetylation // inferred from direct assay","0000123 // histone acetyltransferase complex // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:47865916-47906456 (+) // 98.51 // q21.33"]
["11745731_x_at",0.3633814,0.09187412,-0.09187412,0.17878866,-0.3850255,-0.21969795,0.6048675,0.28486755,1.200059,0.2631054,1.200059,"up","TNIP1",10318,"0002755 // MyD88-dependent toll-like receptor signaling pathway // inferred from sequence or structural similarity /// 0006412 // translation // traceable author statement /// 0006952 // defense response // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007159 // leukocyte cell-cell adhesion // inferred from mutant phenotype /// 0009101 // glycoprotein biosynthetic process // inferred from direct assay /// 0043124 // negative regulation of I-kappaB kinase/NF-kappaB cascade // inferred from direct assay /// 0045071 // negative regulation of viral genome replication // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0050729 // positive regulation of inflammatory response // inferred from sequence or structural similarity /// 0070373 // negative regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0085032 // modulation by symbiont of host I-kappaB kinase/NF-kappaB cascade // inferred from direct assay","0005622 // intracellular // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0051019 // mitogen-activated protein kinase binding // inferred from direct assay","chr5:150410141-150460635 (-) // 99.73 // q33.1"]
["11738419_a_at",-0.12072897,0.018523455,0.0023782253,0.024121046,-0.0023784637,-0.051095963,0.86112803,0.65783834,-1.0164162,-0.023491263,1.0164162,"down","ANGPT4",51378,"0001525 // angiogenesis // inferred from electronic annotation /// 0001935 // endothelial cell proliferation // inferred from direct assay /// 0006916 // anti-apoptosis // inferred from direct assay /// 0007165 // signal transduction // inferred from electronic annotation /// 0007171 // activation of transmembrane receptor protein tyrosine kinase activity // inferred from direct assay /// 0007596 // blood coagulation // traceable author statement /// 0010595 // positive regulation of endothelial cell migration // inferred from direct assay /// 0016525 // negative regulation of angiogenesis // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043536 // positive regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0043537 // negative regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from direct assay /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0050900 // leukocyte migration // traceable author statement /// 0071456 // cellular response to hypoxia // inferred from expression pattern","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation","0005102 // receptor binding // inferred from electronic annotation /// 0030297 // transmembrane receptor protein tyrosine kinase activator activity // inferred from direct assay /// 0030971 // receptor tyrosine kinase binding // inferred from direct assay","chr20:853298-896977 (-) // 98.17 // p13"]
["11734653_x_at",0.032652855,0.042331696,0.052210808,-0.063960075,-0.032652855,-0.07723808,0.057811372,0.002213206,1.0720326,0.10034874,1.0720326,"up","ATP5F1",515,"0006200 // ATP catabolic process // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015986 // ATP synthesis coupled proton transport // not recorded /// 0015986 // ATP synthesis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0042776 // mitochondrial ATP synthesis coupled proton transport // inferred by curator /// 0042776 // mitochondrial ATP synthesis coupled proton transport // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046034 // ATP metabolic process // inferred from electronic annotation","0000276 // mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) // not recorded /// 0000276 // mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) // inferred from electronic annotation /// 0005739 // mitochondrion // inferred by curator /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from direct assay /// 0005759 // mitochondrial matrix // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0045263 // proton-transporting ATP synthase complex, coupling factor F(o) // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0022857 // transmembrane transporter activity // inferred by curator /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism // not recorded","chr1:111991486-112004523 (+) // 40.64 // p13.2"]
["11717779_at",-0.0192585,0.06391525,0.0192585,0.1172533,-0.09629917,-0.069561005,0.84506637,0.62686753,1.026339,0.037507407,1.026339,"up","DHX35",60625,"0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005681 // spliceosomal complex // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr20:37597416-37668366 (+) // 93.74 // q11.23"]
["11728517_x_at",-0.004255295,-0.137537,-0.017399788,0.09783077,0.004255295,0.035354614,0.40210205,0.12211189,-1.0709399,-0.09887752,1.0709399,"down","NSUN5P1",155400,"","","","chr7:75039604-75046066 (+) // 88.16 // q11.23 /// chr7:72418836-72425302 (-) // 87.09 // q11.23"]
["11740361_s_at",-0.073459625,-0.09805727,0.076274395,0.073459625,0.24534655,-0.17849731,0.8255958,0.59096247,-1.0559322,-0.078517154,1.0559322,"down","FOXN3",1112,"0000077 // DNA damage checkpoint // traceable author statement /// 0000085 // G2 phase of mitotic cell cycle // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007389 // pattern specification process // not recorded /// 0009790 // embryo development // not recorded /// 0009888 // tissue development // not recorded /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // not recorded","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // not recorded","0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008134 // transcription factor binding // not recorded /// 0008301 // DNA binding, bending // not recorded /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr14:89622516-90085456 (-) // 95.94 // q31.3"]
["11747942_a_at",-0.120423555,-0.0064721107,0.039156437,-0.085205555,0.04321003,0.0064721107,0.9210443,0.78924966,-1.0121375,-0.01740534,1.0121375,"down","ZEB2",9839,"0001755 // neural crest cell migration // inferred from electronic annotation /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001843 // neural tube closure // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007399 // nervous system development // non-traceable author statement /// 0007417 // central nervous system development // inferred from electronic annotation /// 0021766 // hippocampus development // inferred from electronic annotation /// 0021846 // cell proliferation in forebrain // inferred from electronic annotation /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0043507 // positive regulation of JUN kinase activity // inferred from electronic annotation /// 0048598 // embryonic morphogenesis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019208 // phosphatase regulator activity // non-traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046332 // SMAD binding // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:145146779-145277686 (-) // 98.9 // q22.3"]
["11734980_a_at",0.23636532,0.063028336,0.025640488,-0.025640488,-0.06949139,-0.19424438,0.29843593,0.06747683,1.1525294,0.2048035,1.1525294,"up","RALY",22913,"0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030530 // heterogeneous nuclear ribonucleoprotein complex // traceable author statement /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement","chr20:32581558-32668065 (+) // 92.09 // q11.22"]
["11758107_x_at",0.22639275,0.006699562,-0.016259193,0.32707977,-0.006699562,-0.02752018,0.95102584,0.8637113,-1.0177212,-0.025342362,1.0177212,"down","PCBP1",5093,"0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016071 // mRNA metabolic process // non-traceable author statement","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr2:70314604-70316309 (+) // 89.81 // p13.3"]
["11746642_s_at",-0.24305081,-0.08698177,0.08698201,-0.53268576,0.13360596,0.2129755,0.980567,0.9442192,-1.0132443,-0.01898202,1.0132443,"down","GRM5",2915,"0000185 // activation of MAPKKK activity // inferred from electronic annotation /// 0002029 // desensitization of G-protein coupled receptor protein signaling pathway // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007206 // phospholipase C-activating G-protein coupled glutamate receptor signaling pathway // traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007612 // learning // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0040013 // negative regulation of locomotion // inferred from electronic annotation /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048170 // positive regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0043198 // dendritic shaft // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0008066 // glutamate receptor activity // traceable author statement /// 0031687 // A2A adenosine receptor binding // inferred from electronic annotation","chr11:88240700-88781040 (-) // 97.71 // q14.2"]
["11716835_a_at",0.40144444,0.10444164,0.11812019,-0.10444164,-0.33116913,-0.3551178,0.16156353,0.019814223,1.3866255,0.4715782,1.3866255,"up","DHRS3",9249,"0007601 // visual perception // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0042572 // retinol metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000166 // nucleotide binding // traceable author statement /// 0009055 // electron carrier activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0052650 // NADP-retinol dehydrogenase activity // inferred from electronic annotation","chr1:12627938-12678367 (-) // 93.51 // p36.22"]
["11749714_a_at",0.3581891,0.023303032,-0.3370986,0.14528751,-0.023302555,-0.16347218,0.9650429,0.9026213,1.0200409,0.028626958,1.0200409,"up","GGA3",23163,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // non-traceable author statement /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005622 // intracellular // non-traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030131 // clathrin adaptor complex // inferred from electronic annotation /// 0044431 // Golgi apparatus part // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0030306 // ADP-ribosylation factor binding // inferred from direct assay","chr17:73233378-73258442 (-) // 99.96 // q25.1"]
["11747589_a_at",0.0029478073,-0.025838852,0.023823738,0.068473816,-0.0029478073,-0.03283024,0.9118267,0.7665842,-1.0073658,-0.01058769,1.0073658,"down","GOT2",2806,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006103 // 2-oxoglutarate metabolic process // inferred from sequence or structural similarity /// 0006107 // oxaloacetate metabolic process // inferred from electronic annotation /// 0006520 // cellular amino acid metabolic process // inferred from electronic annotation /// 0006531 // aspartate metabolic process // inferred from sequence or structural similarity /// 0006532 // aspartate biosynthetic process // inferred from electronic annotation /// 0006533 // aspartate catabolic process // inferred from direct assay /// 0006536 // glutamate metabolic process // inferred from sequence or structural similarity /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // traceable author statement /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0015908 // fatty acid transport // inferred from expression pattern /// 0019550 // glutamate catabolic process to aspartate // inferred from electronic annotation /// 0019551 // glutamate catabolic process to 2-oxoglutarate // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045471 // response to ethanol // inferred from direct assay","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004069 // L-aspartate:2-oxoglutarate aminotransferase activity // not recorded /// 0004069 // L-aspartate:2-oxoglutarate aminotransferase activity // inferred from direct assay /// 0004069 // L-aspartate:2-oxoglutarate aminotransferase activity // inferred from sequence or structural similarity /// 0004069 // L-aspartate:2-oxoglutarate aminotransferase activity // inferred from electronic annotation /// 0008483 // transaminase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0080130 // L-phenylalanine:2-oxoglutarate aminotransferase activity // inferred from electronic annotation","chr16:58741721-58768230 (-) // 99.75 // q21"]
["11722624_a_at",0.3358121,0.003788948,-0.43631172,0.21326447,-0.003788948,-0.024530888,0.8866686,0.71130604,-1.0672404,-0.093885124,1.0672404,"down","CNOT3",4849,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement","0000932 // cytoplasmic mRNA processing body // inferred from sequence or structural similarity /// 0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr19:54641404-54659445 (+) // 97.03 // q13.42"]
["11725035_s_at",-0.15404987,-0.09438324,0.005970001,-0.005970001,0.108198166,0.015527725,0.37935525,0.108798474,-1.0867898,-0.12007299,1.0867898,"down","LMBRD1",55788,"0006810 // transport // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0031419 // cobalamin binding // inferred from electronic annotation","chr6:70385698-70507049 (-) // 97.21 // q13"]
["11751113_a_at",0.24180412,-0.029664516,0.004321575,-0.038893223,-0.004321575,0.057082176,0.7677279,0.49425063,1.0479219,0.06753119,1.0479219,"up","SNX11",29916,"0006810 // transport // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation","0008289 // lipid binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr17:46184910-46199497 (+) // 99.81 // q21.32"]
["11754797_a_at",0.004160881,-0.082139015,-0.115226746,0.5354862,0.4460659,-0.004160881,0.3342605,0.08428413,-1.3105739,-0.39019874,1.3105739,"down","CHUK",1147,"0002011 // morphogenesis of an epithelial sheet // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0006955 // immune response // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0007252 // I-kappaB phosphorylation // traceable author statement /// 0007252 // I-kappaB phosphorylation // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0008063 // Toll signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009615 // response to virus // traceable author statement /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030316 // osteoclast differentiation // inferred from electronic annotation /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0033598 // mammary gland epithelial cell proliferation // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0060749 // mammary gland alveolus development // inferred from electronic annotation /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0008385 // IkappaB kinase complex // traceable author statement /// 0009898 // internal side of plasma membrane // inferred from sequence or structural similarity /// 0035631 // CD40 receptor complex // inferred from sequence or structural similarity /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008384 // IkappaB kinase activity // traceable author statement /// 0008384 // IkappaB kinase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr10:101948055-101989321 (-) // 81.0 // q24.31"]
["11733028_s_at",0.18404198,0.08900833,0.12144947,-0.08900833,-0.17599487,-0.2744274,0.09646198,0.0067198235,1.240834,0.3113101,1.240834,"up","AIDA",64853,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0009953 // dorsal/ventral pattern formation // inferred from sequence or structural similarity /// 0043496 // regulation of protein homodimerization activity // inferred from sequence or structural similarity /// 0043496 // regulation of protein homodimerization activity // inferred from electronic annotation /// 0043508 // negative regulation of JUN kinase activity // inferred from direct assay /// 0043508 // negative regulation of JUN kinase activity // inferred from electronic annotation /// 0046329 // negative regulation of JNK cascade // inferred from sequence or structural similarity /// 0046329 // negative regulation of JNK cascade // inferred from electronic annotation","0044444 // cytoplasmic part // inferred from electronic annotation","0019904 // protein domain specific binding // inferred from electronic annotation","chr1:222841356-222885864 (-) // 95.98 // q41"]
["11715471_a_at",0.089411736,0.05901146,-0.05901146,0.06363106,-0.37414074,-0.20798016,0.5226317,0.20879875,1.1507974,0.20263383,1.1507974,"up","SRPR",6734,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006613 // cotranslational protein targeting to membrane // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005785 // signal recognition particle receptor complex // inferred from electronic annotation /// 0005785 // signal recognition particle receptor complex // traceable author statement /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005047 // signal recognition particle binding // inferred from electronic annotation /// 0005047 // signal recognition particle binding // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr11:126132832-126138854 (-) // 95.99 // q24.2"]
["11763299_a_at",-0.045945168,0.14188051,0.045945168,-0.42059898,-0.12375736,0.081008434,0.5836895,0.26395765,1.1500869,0.20174284,1.1500869,"up","UBE3B",89910,"0006464 // cellular protein modification process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // not recorded","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // not recorded /// 0005737 // cytoplasm // not recorded","0004842 // ubiquitin-protein ligase activity // not recorded /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation","chr12:109967788-109972876 (+) // 96.4 // q24.11"]
["11751540_a_at",0.12190628,0.1345501,0.035463333,-0.21376324,-0.30494213,-0.035463333,0.19685985,0.029477047,1.2159041,0.28202945,1.2159041,"up","CYBASC3",220002,"0006810 // transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:61117312-61129321 (-) // 82.89 // q12.2"]
["11762544_at",-0.48960018,0.012201309,0.18828058,-0.24543,0.19078398,-0.012201309,0.91420305,0.77204305,-1.0526971,-0.074090324,1.0526971,"down","DNAJC24",120526,"0006457 // protein folding // inferred from electronic annotation","","0031072 // heat shock protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr11:31391403-31449511 (+) // 91.07 // p13"]
["11755810_s_at",-0.11662865,-0.13198328,-0.08619356,0.089090824,0.18184042,0.08619356,0.061522745,0.0025118897,-1.1733581,-0.23064336,1.1733581,"down","TAPT1",202018,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0048706 // embryonic skeletal system development // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0016520 // growth hormone-releasing hormone receptor activity // traceable author statement","chr4:16162918-16228094 (-) // 96.16 // p15.32"]
["11727041_a_at",0.07786369,0.08329773,0.011225224,-0.033435345,-0.011225224,-0.23554945,0.38961467,0.1147005,1.1102353,0.15086551,1.1102353,"up","TTI2",80185,"","","","chr8:33356232-33371119 (-) // 94.94 // p12"]
["11741505_s_at",0.15897655,0.049280167,0.08398056,-0.049280167,-0.17142677,-0.071305275,0.15046896,0.017160028,1.1445256,0.19474979,1.1445256,"up","NREP",9315,"0017015 // regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0031103 // axon regeneration // inferred from electronic annotation /// 0045664 // regulation of neuron differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","","chr5:111064999-111312628 (-) // 99.91 // q22.1"]
["11747022_a_at",-0.1898787,-0.00084900856,0.00084900856,-0.083379745,0.079493046,0.02276969,0.72358376,0.42962375,-1.0494164,-0.069587275,1.0494164,"down","ATP13A4",84239,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:193157903-193272696 (-) // 94.36 // q29"]
["11753874_x_at",0.20526028,-0.028765678,0.04969597,0.028765202,-0.05146265,-0.16919613,0.5048734,0.19496411,1.1014174,0.13936134,1.1014174,"up","BCL2L15",440603,"0006915 // apoptotic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","","chr1:114424542-114429997 (-) // 99.51 // p13.2"]
["11723230_a_at",-0.1965971,-0.3015542,0.029245853,0.21601105,0.24008083,-0.029245377,0.33217245,0.08341014,-1.2299366,-0.29858395,1.2299366,"down","RNF138",51444,"0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr18:29671843-29711523 (+) // 95.8 // q12.1"]
["11739628_a_at",-0.14066696,0.026792526,-0.052520752,0.14465332,-0.026792526,0.070655346,0.46335378,0.16303326,-1.0854579,-0.1183038,1.0854579,"down","CSF1",1435,"0001503 // ossification // inferred from electronic annotation /// 0001954 // positive regulation of cell-matrix adhesion // inferred from sequence or structural similarity /// 0001954 // positive regulation of cell-matrix adhesion // inferred from electronic annotation /// 0003006 // developmental process involved in reproduction // inferred from sequence or structural similarity /// 0003006 // developmental process involved in reproduction // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0008283 // cell proliferation // non-traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0010743 // regulation of macrophage derived foam cell differentiation // non-traceable author statement /// 0010744 // positive regulation of macrophage derived foam cell differentiation // inferred from direct assay /// 0030097 // hemopoiesis // non-traceable author statement /// 0030154 // cell differentiation // non-traceable author statement /// 0030225 // macrophage differentiation // traceable author statement /// 0030225 // macrophage differentiation // inferred from electronic annotation /// 0030278 // regulation of ossification // inferred from electronic annotation /// 0030316 // osteoclast differentiation // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from sequence or structural similarity /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0032270 // positive regulation of cellular protein metabolic process // inferred from direct assay /// 0032946 // positive regulation of mononuclear cell proliferation // inferred from direct assay /// 0040018 // positive regulation of multicellular organism growth // inferred from electronic annotation /// 0042117 // monocyte activation // non-traceable author statement /// 0042476 // odontogenesis // inferred from electronic annotation /// 0042488 // positive regulation of odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation /// 0045651 // positive regulation of macrophage differentiation // inferred from direct assay /// 0045651 // positive regulation of macrophage differentiation // inferred from electronic annotation /// 0045657 // positive regulation of monocyte differentiation // inferred from sequence or structural similarity /// 0045657 // positive regulation of monocyte differentiation // inferred from electronic annotation /// 0045672 // positive regulation of osteoclast differentiation // inferred from direct assay /// 0045672 // positive regulation of osteoclast differentiation // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from sequence or structural similarity /// 0045860 // positive regulation of protein kinase activity // inferred from electronic annotation /// 0046579 // positive regulation of Ras protein signal transduction // inferred from electronic annotation /// 0048873 // homeostasis of number of cells within a tissue // inferred from electronic annotation /// 0060444 // branching involved in mammary gland duct morphogenesis // inferred from electronic annotation /// 0060611 // mammary gland fat development // inferred from electronic annotation /// 0060763 // mammary duct terminal end bud growth // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043235 // receptor complex // inferred from sequence or structural similarity /// 0043235 // receptor complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005125 // cytokine activity // inferred from direct assay /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005157 // macrophage colony-stimulating factor receptor binding // inferred from sequence or structural similarity /// 0005157 // macrophage colony-stimulating factor receptor binding // traceable author statement /// 0005157 // macrophage colony-stimulating factor receptor binding // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from direct assay /// 0008083 // growth factor activity // non-traceable author statement /// 0008083 // growth factor activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr1:110453232-110472656 (+) // 96.98 // p13.3"]
["11741188_a_at",-0.085202694,0.025252819,-0.025252342,-0.19851875,0.03135538,0.05060768,0.9674536,0.9093026,1.0072705,0.010451104,1.0072705,"up","SLC30A6",55676,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006829 // zinc ion transport // inferred from electronic annotation /// 0006895 // Golgi to endosome transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0071577 // zinc ion transmembrane transport // inferred from electronic annotation","0000139 // Golgi membrane // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005385 // zinc ion transmembrane transporter activity // inferred from electronic annotation /// 0008324 // cation transmembrane transporter activity // inferred from electronic annotation","chr2:32390916-32446809 (+) // 85.78 // p22.3"]
["11745010_a_at",0.18950415,0.01979351,0.10279846,-0.01979351,-0.16682291,-0.23134041,0.2217782,0.03760978,1.183739,0.24335095,1.183739,"up","DCBLD2",131566,"0007155 // cell adhesion // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0030522 // intracellular receptor mediated signaling pathway // non-traceable author statement /// 0042060 // wound healing // inferred from direct assay","0005887 // integral to plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:98516626-98620034 (-) // 97.36 // q12.1"]
["11734608_x_at",0.023286343,0.0383873,-0.023285866,0.095798016,-0.023618698,-0.072099686,0.9352445,0.82220554,1.0088904,0.012769443,1.0088904,"up","SHQ1",55164,"0022618 // ribonucleoprotein complex assembly // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 2000233 // negative regulation of rRNA processing // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0015030 // Cajal body // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr3:72798427-72897599 (-) // 73.2 // p13"]
["11752538_a_at",-0.0060412884,-0.06820035,0.09036231,-0.18910336,0.006041527,0.059767246,0.8453964,0.62753415,1.0327362,0.046471756,1.0327362,"up","GABRG1",2565,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from electronic annotation /// 0007214 // gamma-aminobutyric acid signaling pathway // inferred from electronic annotation /// 0007268 // synaptic transmission // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0034707 // chloride channel complex // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004890 // GABA-A receptor activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from electronic annotation","chr4:46042610-46126082 (-) // 94.54 // p12"]
["11753319_a_at",0.02406311,-0.021123886,-0.105814934,0.021123886,-0.13891792,0.26759768,0.7928691,0.53490627,-1.0601192,-0.08422642,1.0601192,"down","KCNMB3",27094,"0001508 // regulation of action potential // inferred from direct assay /// 0005513 // detection of calcium ion // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from direct assay /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0019228 // regulation of action potential in neuron // inferred from direct assay","0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0008076 // voltage-gated potassium channel complex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0015269 // calcium-activated potassium channel activity // inferred from direct assay /// 0015269 // calcium-activated potassium channel activity // inferred from electronic annotation /// 0015459 // potassium channel regulator activity // non-traceable author statement /// 0015459 // potassium channel regulator activity // traceable author statement","chr3:178957593-178984790 (-) // 99.9 // q26.32"]
["11736833_a_at",-0.32433128,0.0561862,0.13901281,-0.26377344,-0.0561862,0.37340927,0.9292276,0.8089852,-1.0430878,-0.060860652,1.0430878,"down","ZNF619",285267,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:40518603-40530069 (+) // 97.06 // p22.1"]
["11748543_a_at",-0.022655487,-0.07501459,-0.12890673,0.028887749,0.02265501,0.15890217,0.2676419,0.054157555,-1.1062473,-0.14567395,1.1062473,"down","TXNIP",10628,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006606 // protein import into nucleus // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from direct assay /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032570 // response to progesterone stimulus // inferred from electronic annotation /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from electronic annotation /// 0051782 // negative regulation of cell division // inferred from direct assay /// 0071228 // cellular response to tumor cell // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004857 // enzyme inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr1:145439346-145441230 (+) // 100.0 // q21.1"]
["11737251_at",-0.24564075,0.047520876,0.038689375,-0.038689375,-0.24456191,0.26532674,0.92645484,0.8026513,-1.0332352,-0.047168687,1.0332352,"down","CD226",10666,"0001816 // cytokine production // inferred from electronic annotation /// 0002860 // positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target // inferred from mutant phenotype /// 0002891 // positive regulation of immunoglobulin mediated immune response // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0008037 // cell recognition // traceable author statement /// 0033005 // positive regulation of mast cell activation // inferred from direct assay /// 0045954 // positive regulation of natural killer cell mediated cytotoxicity // inferred from mutant phenotype /// 0050776 // regulation of immune response // traceable author statement /// 0060369 // positive regulation of Fc receptor mediated stimulatory signaling pathway // inferred from direct assay","0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045121 // membrane raft // traceable author statement","0004872 // receptor activity // inferred from electronic annotation /// 0005178 // integrin binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0050839 // cell adhesion molecule binding // inferred from physical interaction","chr18:67530194-67624232 (-) // 89.61 // q22.2"]
["11749891_a_at",-0.17178202,-0.029124737,-0.046354294,0.029124737,0.32551098,0.2106905,0.25630498,0.049610928,-1.2065288,-0.27086234,1.2065288,"down","HLF",3131,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0048511 // rhythmic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr17:53343170-53398775 (+) // 94.51 // q22"]
["11737020_x_at",-0.028390408,-0.0787487,-0.09050465,0.02838993,0.12843227,0.15789604,0.15074053,0.017258842,-1.1256727,-0.17078741,1.1256727,"down","AGAP2",116986,"0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0032312 // regulation of ARF GTPase activity // inferred from electronic annotation /// 0033601 // positive regulation of mammary gland epithelial cell proliferation // inferred from electronic annotation /// 0042177 // negative regulation of protein catabolic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from genetic interaction /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046427 // positive regulation of JAK-STAT cascade // inferred from electronic annotation /// 0060749 // mammary gland alveolus development // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008060 // ARF GTPase activator activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0030295 // protein kinase activator activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:58118980-58135984 (-) // 96.98 // q14.1"]
["11746001_x_at",0.08442211,0.020457745,0.47854042,-0.21496868,-0.33984566,-0.020457745,0.3383159,0.086471066,1.3069743,0.38623077,1.3069743,"up","ZNF252P",286101,"","0005622 // intracellular // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation","chr8:146198974-146225155 (-) // 86.83 // q24.3"]
["11762275_x_at",-0.19715643,-0.02611351,0.010426044,0.053286552,0.08210707,-0.010426044,0.48681134,0.18087876,-1.0811778,-0.112603836,1.0811778,"down","UQCRB",7381,"0006119 // oxidative phosphorylation // traceable author statement /// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c // inferred from electronic annotation /// 0009060 // aerobic respiration // traceable author statement /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005746 // mitochondrial respiratory chain // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation","0008121 // ubiquinol-cytochrome-c reductase activity // inferred from electronic annotation","chr8:97242942-97247774 (-) // 96.64 // q22.1"]
["11730701_at",-0.06955528,0.010526657,0.053408623,-0.08532429,-0.010527134,0.20979595,0.88059294,0.69824123,-1.0280104,-0.039854813,1.0280104,"down","C11orf49",79096,"","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay","","chr11:46958250-47185932 (+) // 98.78 // p11.2"]
["11743503_a_at",0.06336784,0.026096344,0.005016327,-0.005016327,-0.16678047,-0.06211567,0.35485667,0.09534685,1.0788276,0.10946436,1.0788276,"up","GTF3C2",2976,"0006351 // transcription, DNA-dependent // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006383 // transcription from RNA polymerase III promoter // inferred from direct assay /// 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0042791 // 5S class rRNA transcription from RNA polymerase III type 1 promoter // inferred by curator /// 0042797 // tRNA transcription from RNA polymerase III promoter // inferred by curator","0000127 // transcription factor TFIIIC complex // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003677 // DNA binding // inferred from direct assay","chr2:27548521-27579896 (-) // 93.44 // p23.3"]
["11758812_at",-0.2563672,0.13099623,0.32539415,-0.08704662,-0.023412704,0.023412704,0.8360059,0.61154777,1.0685763,0.095689975,1.0685763,"up","SHFM1",7979,"0000724 // double-strand break repair via homologous recombination // inferred from electronic annotation /// 0006508 // proteolysis // inferred from direct assay /// 0006508 // proteolysis // inferred from sequence or structural similarity","0000502 // proteasome complex // inferred from direct assay /// 0000502 // proteasome complex // inferred from electronic annotation /// 0000502 // proteasome complex // inferred from sequence or structural similarity /// 0032039 // integrator complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from direct assay /// 0008233 // peptidase activity // inferred from sequence or structural similarity","chr7:96317911-96339202 (-) // 74.7 // q21.3"]
["11742940_s_at",0.21973896,0.007563591,0.014922142,-0.007563591,-0.15602207,-0.28325748,0.35525456,0.095574446,1.1725824,0.22968929,1.1725824,"up","UBE2D3",7323,"0000209 // protein polyubiquitination // inferred from direct assay /// 0006281 // DNA repair // inferred from electronic annotation /// 0006464 // cellular protein modification process // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006513 // protein monoubiquitination // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030509 // BMP signaling pathway // traceable author statement /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay","0005654 // nucleoplasm // traceable author statement /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation","chr4:103717132-103749105 (-) // 85.58 // q24"]
["11763702_a_at",0.20861006,0.14911413,0.10172939,-0.10172939,-0.15117073,-0.123612404,0.04440257,0.0012167057,1.2130637,0.27865532,1.2130637,"up","WDR48",57599,"0016579 // protein deubiquitination // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr3:39131058-39138155 (+) // 75.9 // p22.2"]
["11739178_a_at",-0.4086852,0.20930481,-0.14151096,-0.17257738,0.33729362,0.14151096,0.7067264,0.40610835,-1.1612722,-0.21570614,1.1612722,"down","ISM2",145501,"","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay","","chr14:77940736-77965687 (-) // 89.18 // q24.3"]
["11740300_x_at",0.15559101,-0.0068855286,0.0068855286,-0.14556217,-0.019477367,0.020143509,0.5560439,0.23722063,1.071894,0.10016231,1.071894,"up","MARCH2",51257,"0006897 // endocytosis // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:8478181-8503897 (+) // 87.77 // p13.2"]
["11746150_s_at",-0.15511513,0.104867935,-0.029736519,0.08016062,-0.15857124,0.029736519,0.9738644,0.9252254,-1.0072603,-0.010436591,1.0072603,"down","AGAP9 /// BMS1 /// BMS1P1 /// BMS1P2 /// BMS1P4 /// BMS1P5 /// BMS1P6","399761 /// 414216 /// 642517 /// 642826 /// 728053 /// 729096 /// 9790","0006184 // GTP catabolic process // inferred from electronic annotation /// 0032312 // regulation of ARF GTPase activity // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0042255 // ribosome assembly // inferred from sequence or structural similarity /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from sequence or structural similarity /// 0005730 // nucleolus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008060 // ARF GTPase activator activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:75461120-75490263 (-) // 77.69 // q22.2"]
["11761672_at",-0.18601465,0.16483736,-0.6013043,-0.012039661,0.012039661,0.02446127,0.69142467,0.3857544,-1.1612251,-0.21564764,1.1612251,"down","SLC16A5",9121,"0006810 // transport // inferred from electronic annotation /// 0015711 // organic anion transport // inferred from electronic annotation /// 0015718 // monocarboxylic acid transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008028 // monocarboxylic acid transmembrane transporter activity // traceable author statement /// 0015293 // symporter activity // inferred from electronic annotation /// 0015355 // secondary active monocarboxylate transmembrane transporter activity // inferred from electronic annotation","chr17:73089381-73100505 (+) // 96.42 // q25.1"]
["11733259_s_at",0.04090023,-0.04090023,-0.13030338,0.26965427,0.08609295,-0.07251549,0.6005072,0.2804069,-1.1002604,-0.13784498,1.1002604,"down","TAOK3",51347,"0000165 // MAPK cascade // inferred from mutant phenotype /// 0006281 // DNA repair // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0031572 // G2/M transition DNA damage checkpoint // inferred from mutant phenotype /// 0032874 // positive regulation of stress-activated MAPK cascade // inferred from mutant phenotype /// 0043507 // positive regulation of JUN kinase activity // inferred from mutant phenotype /// 0046329 // negative regulation of JNK cascade // inferred from direct assay /// 0046330 // positive regulation of JNK cascade // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004860 // protein kinase inhibitor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr12:118587605-118810750 (-) // 95.99 // q24.23"]
["11762103_a_at",-0.17186952,-0.4061787,0.051961184,0.15982318,0.16208172,-0.051961184,0.447726,0.15184212,-1.2019223,-0.26534364,1.2019223,"down","ZNF274",10782,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005730 // nucleolus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:58694475-58722075 (+) // 81.93 // q13.43"]
["11752248_a_at",0.06668043,0.26751995,0.13894463,-0.13881254,-0.06668043,-0.10336876,0.13561063,0.013883277,1.198034,0.2606689,1.198034,"up","MET",4233,"0000187 // activation of MAPK activity // inferred from electronic annotation /// 0001101 // response to acid // inferred from electronic annotation /// 0001764 // neuron migration // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0001890 // placenta development // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007166 // cell surface receptor signaling pathway // non-traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007420 // brain development // inferred from electronic annotation /// 0007517 // muscle organ development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0007569 // cell aging // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008584 // male gonad development // inferred from electronic annotation /// 0009611 // response to wounding // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010800 // positive regulation of peptidyl-threonine phosphorylation // inferred from electronic annotation /// 0010801 // negative regulation of peptidyl-threonine phosphorylation // inferred from electronic annotation /// 0010828 // positive regulation of glucose transport // inferred from electronic annotation /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0014003 // oligodendrocyte development // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014812 // muscle cell migration // inferred from electronic annotation /// 0014902 // myotube differentiation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0021953 // central nervous system neuron differentiation // inferred from electronic annotation /// 0030317 // sperm motility // inferred from electronic annotation /// 0030534 // adult behavior // inferred from electronic annotation /// 0031016 // pancreas development // inferred from electronic annotation /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0045840 // positive regulation of mitosis // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048012 // hepatocyte growth factor receptor signaling pathway // traceable author statement /// 0048012 // hepatocyte growth factor receptor signaling pathway // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from mutant phenotype /// 0050775 // positive regulation of dendrite morphogenesis // inferred from electronic annotation /// 0051450 // myoblast proliferation // inferred from electronic annotation /// 0060665 // regulation of branching involved in salivary gland morphogenesis by mesenchymal-epithelial signaling // inferred from electronic annotation /// 0071241 // cellular response to inorganic substance // inferred from electronic annotation /// 0071243 // cellular response to arsenic-containing substance // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0071354 // cellular response to interleukin-6 // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0071375 // cellular response to peptide hormone stimulus // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009925 // basal plasma membrane // inferred from direct assay /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019861 // flagellum // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0060076 // excitatory synapse // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // non-traceable author statement /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005008 // hepatocyte growth factor-activated receptor activity // traceable author statement /// 0005008 // hepatocyte growth factor-activated receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008013 // beta-catenin binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0043274 // phospholipase binding // inferred from electronic annotation /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr7:116339138-116399652 (+) // 99.92 // q31.2"]
["11728807_at",-0.17811537,-0.057518482,0.09699774,-0.08233833,0.057518482,0.106479645,0.7675097,0.4939751,-1.0522168,-0.07343195,1.0522168,"down","SIRT5",23408,"0006342 // chromatin silencing // traceable author statement /// 0006471 // protein ADP-ribosylation // traceable author statement /// 0006476 // protein deacetylation // inferred from direct assay /// 0036047 // peptidyl-lysine demalonylation // inferred from direct assay /// 0036047 // peptidyl-lysine demalonylation // inferred from electronic annotation /// 0036049 // peptidyl-lysine desuccinylation // inferred from direct assay /// 0036049 // peptidyl-lysine desuccinylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from direct assay /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from direct assay /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0003950 // NAD+ ADP-ribosyltransferase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0036054 // protein-malonyllysine demalonylase activity // inferred from direct assay /// 0036054 // protein-malonyllysine demalonylase activity // inferred from electronic annotation /// 0036055 // protein-succinyllysine desuccinylase activity // inferred from direct assay /// 0036055 // protein-succinyllysine desuccinylase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070403 // NAD+ binding // inferred from direct assay /// 0070403 // NAD+ binding // inferred from electronic annotation","chr6:13579032-13605971 (+) // 89.3 // p23"]
["11718039_at",0.1426754,0.24380302,0.13673115,-0.28444672,-0.3615284,-0.13673162,0.077862546,0.004286943,1.352197,0.4353054,1.352197,"up","DCAF12",25853,"0016567 // protein ubiquitination // inferred by curator /// 0016567 // protein ubiquitination // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0080008 // CUL4-RING ubiquitin ligase complex // inferred from direct assay","","chr9:34086384-34126771 (-) // 94.9 // p13.3"]
["11761827_x_at",0.14017487,0.028007507,-0.0062441826,-0.22229385,-0.05527115,0.0062441826,0.4459201,0.15048617,1.105286,0.14441973,1.105286,"up","C21orf58",54058,"","","","chr21:47734784-47743783 (-) // 79.81 // q22.3"]
["11731317_a_at",-0.17380905,0.019413471,-0.019413471,-0.24858809,0.046070576,0.09607458,0.95101935,0.8636424,-1.0156866,-0.022455357,1.0156866,"down","MMP28",79148,"0006508 // proteolysis // non-traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0004222 // metalloendopeptidase activity // traceable author statement /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:34105508-34122640 (-) // 95.83 // q12"]
["11735529_s_at",-0.3341937,0.283257,0.08487415,-0.123193264,0.012358189,-0.012358189,0.9226667,0.7929851,1.0369719,0.052376837,1.0369719,"up","KLK14",43847,"0006508 // proteolysis // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0009566 // fertilization // inferred from direct assay /// 0045744 // negative regulation of G-protein coupled receptor protein signaling pathway // inferred from direct assay /// 0045745 // positive regulation of G-protein coupled receptor protein signaling pathway // inferred from direct assay /// 0048730 // epidermis morphogenesis // inferred from direct assay /// 0070684 // seminal clot liquefaction // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from direct assay /// 0004252 // serine-type endopeptidase activity // non-traceable author statement /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr19:51581153-51587502 (-) // 92.32 // q13.41"]
["11722238_a_at",0.05452442,-0.044077873,-0.122615814,-0.03190136,0.07553005,0.03190136,0.66799355,0.35587794,-1.0443219,-0.06256647,1.0443219,"down","DPM3",54344,"0005975 // carbohydrate metabolic process // non-traceable author statement /// 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0006501 // C-terminal protein lipidation // traceable author statement /// 0006506 // GPI anchor biosynthetic process // inferred from direct assay /// 0006506 // GPI anchor biosynthetic process // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0018406 // protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan // traceable author statement /// 0031647 // regulation of protein stability // inferred from physical interaction /// 0035268 // protein mannosylation // traceable author statement /// 0035269 // protein O-linked mannosylation // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // inferred from direct assay /// 0031501 // mannosyltransferase complex // traceable author statement /// 0033185 // dolichol-phosphate-mannose synthase complex // inferred from direct assay","0004582 // dolichyl-phosphate beta-D-mannosyltransferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr1:155112366-155113071 (-) // 74.87 // q22"]
["11752302_a_at",-0.041985035,0.3257494,0.041985035,-0.3149705,-0.19662857,0.24007607,0.687167,0.3804564,1.1479746,0.19909073,1.1479746,"up","LAMB3",3914,"0007155 // cell adhesion // inferred from electronic annotation /// 0008544 // epidermis development // traceable author statement /// 0031581 // hemidesmosome assembly // traceable author statement /// 0034329 // cell junction assembly // traceable author statement /// 0050873 // brown fat cell differentiation // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005610 // laminin-5 complex // inferred from electronic annotation","0005198 // structural molecule activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation","chr1:209790922-209825770 (-) // 99.91 // q32.2"]
["11732974_at",-0.4154892,0.1393032,0.1269803,-0.27605104,-0.07254696,0.07254696,0.94618565,0.8495462,1.0297412,0.04228175,1.0297412,"up","OR1D2",4991,"0000060 // protein import into nucleus, translocation // inferred from mutant phenotype /// 0006928 // cellular component movement // traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007338 // single fertilization // inferred from electronic annotation /// 0007608 // sensory perception of smell // traceable author statement /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from direct assay /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004984 // olfactory receptor activity // inferred from direct assay /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr17:2995351-2996290 (-) // 97.41 // p13.3"]
["11717565_s_at",0.002448082,-0.011803627,0.101947784,0.048204422,-0.1040802,-0.002448082,0.7236131,0.4296558,1.0354841,0.050305367,1.0354841,"up","EMP1",2012,"0007275 // multicellular organismal development // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0008544 // epidermis development // traceable author statement /// 0016049 // cell growth // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","","chr12:13349448-13371604 (+) // 93.18 // p13.1"]
["11754820_a_at",-0.43329525,0.0125050545,0.0470829,-0.37605095,0.106339455,-0.012504578,0.9619134,0.89261776,-1.021364,-0.030497076,1.021364,"down","RLTPR",146206,"","","","chr16:67681771-67687115 (+) // 93.38 // q22.1"]
["11716241_x_at",0.31425095,0.010017395,-0.013975143,0.2810583,-0.010017395,-0.02286148,0.9622778,0.8933141,1.0144548,0.020704646,1.0144548,"up","RAB6A",5870,"0000042 // protein targeting to Golgi // inferred from direct assay /// 0006184 // GTP catabolic process // inferred from direct assay /// 0006184 // GTP catabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0018125 // peptidyl-cysteine methylation // inferred from direct assay /// 0034067 // protein localization in Golgi apparatus // inferred from direct assay /// 0072385 // minus-end-directed organelle transport along microtubule // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction","chr11:73386684-73472185 (-) // 96.38 // q13.4"]
["11738072_a_at",-0.051059246,0.16119719,0.061195374,-0.09114218,-0.021343708,0.021343708,0.5971893,0.2766693,1.0625213,0.08749181,1.0625213,"up","LRCH3",84859,"","0005576 // extracellular region // inferred from electronic annotation","","chr3:197518144-197598856 (+) // 84.53 // q29"]
["11716593_x_at",0.15263367,-0.08237076,0.00607872,0.015242577,-0.01680851,-0.00607872,0.88499177,0.70639014,1.0195944,0.027995398,1.0195944,"up","BTBD1",53339,"0016567 // protein ubiquitination // inferred from electronic annotation /// 0043393 // regulation of protein binding // non-traceable author statement","0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr15:83685174-83736186 (-) // 96.3 // q25.2"]
["11760831_x_at",0.16407299,-0.17605972,0.030128479,0.050085068,-0.2135315,-0.030128479,0.8329425,0.60526043,1.0501331,0.070572205,1.0501331,"up","FAHD2B /// FAHD2CP","151313 /// 729234","0008152 // metabolic process // inferred from electronic annotation","","0003824 // catalytic activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:96676345-96681598 (+) // 71.1 // q11.1 /// chr2:97755320-97760572 (-) // 75.0 // q11.2"]
["11721014_s_at",0.07620525,-0.06238365,-0.12727928,0.3200245,0.039232254,-0.039232254,0.6289118,0.3102674,-1.105343,-0.1444941,1.105343,"down","WTAP",9589,"0006397 // mRNA processing // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay","","chr6:160148026-160171040 (+) // 99.51 // q25.3"]
["11716588_at",-0.18697166,-0.14542007,-0.095433235,0.17821312,0.35479164,0.095433235,0.1271456,0.0121538425,-1.2764063,-0.35208762,1.2764063,"down","TMEM165",55858,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr4:56262089-56292341 (+) // 96.6 // q12"]
["11724015_at",-0.1398716,-0.2044034,-0.19591999,0.55942345,0.13987112,0.19977236,0.17212655,0.022378717,-1.3945059,-0.479754,1.3945059,"down","FRA10AC1",118924,"","0005634 // nucleus // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr10:95428327-95462338 (-) // 79.45 // q23.33"]
["11747477_a_at",0.26288843,-0.043340683,0.14428139,-0.008929729,0.008929729,-0.22689247,0.4693552,0.16772574,1.1462384,0.19690719,1.1462384,"up","MAPK8",5599,"0000165 // MAPK cascade // inferred from electronic annotation /// 0001503 // ossification // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006950 // response to stress // traceable author statement /// 0007254 // JNK cascade // inferred from direct assay /// 0007254 // JNK cascade // traceable author statement /// 0007254 // JNK cascade // inferred from electronic annotation /// 0007258 // JUN phosphorylation // inferred from direct assay /// 0007258 // JUN phosphorylation // inferred from electronic annotation /// 0008063 // Toll signaling pathway // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0009411 // response to UV // inferred from direct assay /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0018107 // peptidyl-threonine phosphorylation // inferred from direct assay /// 0018107 // peptidyl-threonine phosphorylation // inferred from mutant phenotype /// 0018107 // peptidyl-threonine phosphorylation // inferred from electronic annotation /// 0031063 // regulation of histone deacetylation // inferred from mutant phenotype /// 0031558 // induction of apoptosis in response to chemical stimulus // inferred from electronic annotation /// 0032091 // negative regulation of protein binding // inferred from direct assay /// 0032880 // regulation of protein localization // inferred from direct assay /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0046686 // response to cadmium ion // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern /// 0090045 // positive regulation of deacetylase activity // inferred from mutant phenotype /// 2000017 // positive regulation of determination of dorsal identity // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004705 // JUN kinase activity // inferred from direct assay /// 0004705 // JUN kinase activity // inferred from electronic annotation /// 0004707 // MAP kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0035033 // histone deacetylase regulator activity // inferred from mutant phenotype /// 0042826 // histone deacetylase binding // inferred from physical interaction","chr10:49514681-49643430 (+) // 100.0 // q11.22"]
["11733562_a_at",0.04285431,0.0047826767,-0.0047831535,0.054614544,-0.11817455,-0.08153963,0.63279843,0.31470582,1.0443832,0.06265111,1.0443832,"up","KLHDC10",23008,"","","","chr7:129710343-129773593 (+) // 96.7 // q32.2"]
["11721326_at",0.15263486,-0.021286726,0.021286488,-0.051532745,0.13706946,-0.10479474,0.80752945,0.5595078,1.0405148,0.05729752,1.0405148,"up","C3orf14",57415,"","","","chr3:62304717-62319977 (+) // 97.09 // p14.2"]
["11762121_a_at",0.08799839,0.06649828,-0.1436758,-0.17416954,-0.06649828,0.18902636,0.9582717,0.88107836,1.0145365,0.02082077,1.0145365,"up","DNMT3B",1789,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006306 // DNA methylation // non-traceable author statement /// 0006306 // DNA methylation // traceable author statement /// 0006306 // DNA methylation // inferred from electronic annotation /// 0006346 // methylation-dependent chromatin silencing // inferred from electronic annotation /// 0006349 // regulation of gene expression by genetic imprinting // inferred from electronic annotation /// 0010212 // response to ionizing radiation // inferred from electronic annotation /// 0010424 // DNA methylation on cytosine within a CG sequence // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0031503 // protein complex localization // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043045 // DNA methylation involved in embryo development // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045814 // negative regulation of gene expression, epigenetic // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0046498 // S-adenosylhomocysteine metabolic process // inferred from electronic annotation /// 0046499 // S-adenosylmethioninamine metabolic process // inferred from electronic annotation /// 0051571 // positive regulation of histone H3-K4 methylation // inferred from mutant phenotype /// 0051573 // negative regulation of histone H3-K9 methylation // inferred from mutant phenotype /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation /// 0090116 // C-5 methylation of cytosine // inferred from direct assay /// 0090116 // C-5 methylation of cytosine // non-traceable author statement /// 0090116 // C-5 methylation of cytosine // traceable author statement /// 0090116 // C-5 methylation of cytosine // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005720 // nuclear heterochromatin // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from mutant phenotype /// 0003886 // DNA (cytosine-5-)-methyltransferase activity // inferred from direct assay /// 0003886 // DNA (cytosine-5-)-methyltransferase activity // non-traceable author statement /// 0003886 // DNA (cytosine-5-)-methyltransferase activity // traceable author statement /// 0003886 // DNA (cytosine-5-)-methyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0009008 // DNA-methyltransferase activity // non-traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0045322 // unmethylated CpG binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051718 // DNA (cytosine-5-)-methyltransferase activity, acting on CpG substrates // inferred from electronic annotation","chr20:31350451-31386319 (+) // 100.0 // q11.21"]
["11730260_a_at",-0.15392327,0.21151543,-0.06322765,-0.045330524,0.045330524,0.19698524,0.8477555,0.6324248,-1.0479285,-0.06754022,1.0479285,"down","PRKAR2B",5577,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0001932 // regulation of protein phosphorylation // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007612 // learning // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0034199 // activation of protein kinase A activity // traceable author statement /// 0035556 // intracellular signal transduction // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045859 // regulation of protein kinase activity // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0071377 // cellular response to glucagon stimulus // traceable author statement","0000267 // cell fraction // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from direct assay /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005626 // insoluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005952 // cAMP-dependent protein kinase complex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0008603 // cAMP-dependent protein kinase regulator activity // inferred from electronic annotation /// 0008603 // cAMP-dependent protein kinase regulator activity // traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0030552 // cAMP binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from direct assay","chr7:106685093-106802256 (+) // 97.34 // q22.3"]
["11734327_a_at",0.026299,0.20761347,-0.037241697,0.1006794,-0.06338096,-0.026298761,0.7859732,0.5232969,1.0438325,0.06189028,1.0438325,"up","CHRM5",1133,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007197 // adenylate cyclase-inhibiting G-protein coupled acetylcholine receptor signaling pathway // traceable author statement /// 0007213 // G-protein coupled acetylcholine receptor signaling pathway // traceable author statement /// 0007213 // G-protein coupled acetylcholine receptor signaling pathway // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0015872 // dopamine transport // inferred from electronic annotation /// 0019226 // transmission of nerve impulse // inferred from electronic annotation /// 0060304 // regulation of phosphatidylinositol dephosphorylation // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004435 // phosphatidylinositol phospholipase C activity // traceable author statement /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0016907 // G-protein coupled acetylcholine receptor activity // inferred from electronic annotation /// 0016907 // G-protein coupled acetylcholine receptor activity // traceable author statement","chr15:34260445-34357295 (+) // 91.3 // q14"]
["11752851_a_at",0.15074778,-0.029937267,0.029937267,0.08467674,-0.10584688,-0.18165064,0.60436034,0.28426164,1.0851212,0.11785613,1.0851212,"up","PPHLN1",51535,"0031424 // keratinization // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","","chr12:42719964-42835231 (+) // 59.36 // q12"]
["11747382_a_at",-0.012515068,-0.09865427,-0.06470251,0.012515068,0.03059578,0.012515068,0.22967286,0.040144842,-1.0549437,-0.07716598,1.0549437,"down","SERGEF",26297,"0007165 // signal transduction // traceable author statement /// 0050709 // negative regulation of protein secretion // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005087 // Ran guanyl-nucleotide exchange factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr11:17868108-18034500 (-) // 89.0 // p15.1"]
["11723973_at",0.13152885,0.08831501,0.18332767,-0.08831501,-0.1561985,-0.115083694,0.05154753,0.0016764348,1.1927207,0.2542562,1.1927207,"up","CHST12",55501,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0016051 // carbohydrate biosynthetic process // inferred from electronic annotation /// 0030206 // chondroitin sulfate biosynthetic process // inferred from direct assay /// 0030208 // dermatan sulfate biosynthetic process // inferred from direct assay","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030173 // integral to Golgi membrane // non-traceable author statement","0008146 // sulfotransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0047756 // chondroitin 4-sulfotransferase activity // inferred from direct assay /// 0047756 // chondroitin 4-sulfotransferase activity // inferred from electronic annotation /// 0050656 // 3'-phosphoadenosine 5'-phosphosulfate binding // non-traceable author statement","chr7:2472195-2474426 (+) // 80.02 // p22.3"]
["11747306_x_at",-0.09450245,0.063565254,0.021608353,-0.021608353,-0.024841309,0.16640568,0.8374767,0.6141326,-1.0303217,-0.04309489,1.0303217,"down","C17orf81",23587,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr17:7155604-7162287 (+) // 98.31 // p13.1"]
["11729468_a_at",-0.15490198,0.09164429,-0.01424408,-0.21196651,0.01424408,0.2737503,0.9098311,0.7614426,-1.0361096,-0.051176574,1.0361096,"down","BZRAP1",9256,"","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030156 // benzodiazepine receptor binding // inferred from physical interaction","chr17:56378591-56406156 (-) // 93.81 // q22"]
["11747774_a_at",0.12372327,-0.30537605,-0.21172357,0.35159802,-0.09338832,0.09338832,0.56635624,0.24703199,-1.187827,-0.24832472,1.187827,"down","SLC11A1",6556,"0000060 // protein import into nucleus, translocation // inferred from electronic annotation /// 0001818 // negative regulation of cytokine production // inferred from sequence or structural similarity /// 0001818 // negative regulation of cytokine production // inferred from electronic annotation /// 0001819 // positive regulation of cytokine production // inferred from sequence or structural similarity /// 0001819 // positive regulation of cytokine production // inferred from electronic annotation /// 0002309 // T cell proliferation involved in immune response // inferred from sequence or structural similarity /// 0002309 // T cell proliferation involved in immune response // inferred from electronic annotation /// 0002369 // T cell cytokine production // inferred from sequence or structural similarity /// 0002369 // T cell cytokine production // inferred from electronic annotation /// 0002606 // positive regulation of dendritic cell antigen processing and presentation // inferred from sequence or structural similarity /// 0002606 // positive regulation of dendritic cell antigen processing and presentation // inferred from electronic annotation /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from sequence or structural similarity /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006826 // iron ion transport // inferred from mutant phenotype /// 0006826 // iron ion transport // inferred from electronic annotation /// 0006828 // manganese ion transport // inferred from sequence or structural similarity /// 0006828 // manganese ion transport // inferred from electronic annotation /// 0006876 // cellular cadmium ion homeostasis // inferred from genetic interaction /// 0006879 // cellular iron ion homeostasis // inferred from mutant phenotype /// 0006909 // phagocytosis // inferred from sequence or structural similarity /// 0006909 // phagocytosis // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from sequence or structural similarity /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement /// 0007035 // vacuolar acidification // inferred from sequence or structural similarity /// 0007035 // vacuolar acidification // inferred from electronic annotation /// 0009617 // response to bacterium // inferred from direct assay /// 0010628 // positive regulation of gene expression // inferred from sequence or structural similarity /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0015707 // nitrite transport // inferred from sequence or structural similarity /// 0015707 // nitrite transport // inferred from electronic annotation /// 0032147 // activation of protein kinase activity // inferred from sequence or structural similarity /// 0032147 // activation of protein kinase activity // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from sequence or structural similarity /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032623 // interleukin-2 production // inferred from sequence or structural similarity /// 0032623 // interleukin-2 production // inferred from electronic annotation /// 0032632 // interleukin-3 production // inferred from sequence or structural similarity /// 0032632 // interleukin-3 production // inferred from electronic annotation /// 0032729 // positive regulation of interferon-gamma production // inferred from sequence or structural similarity /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0034341 // response to interferon-gamma // inferred from sequence or structural similarity /// 0034341 // response to interferon-gamma // inferred from electronic annotation /// 0042060 // wound healing // inferred from sequence or structural similarity /// 0042060 // wound healing // inferred from electronic annotation /// 0042116 // macrophage activation // inferred from sequence or structural similarity /// 0042116 // macrophage activation // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from sequence or structural similarity /// 0042742 // defense response to bacterium // inferred from electronic annotation /// 0042832 // defense response to protozoan // inferred from sequence or structural similarity /// 0042832 // defense response to protozoan // inferred from electronic annotation /// 0043091 // L-arginine import // inferred from sequence or structural similarity /// 0043091 // L-arginine import // inferred from electronic annotation /// 0045342 // MHC class II biosynthetic process // inferred from sequence or structural similarity /// 0045342 // MHC class II biosynthetic process // inferred from electronic annotation /// 0045730 // respiratory burst // inferred from sequence or structural similarity /// 0045730 // respiratory burst // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048002 // antigen processing and presentation of peptide antigen // inferred from sequence or structural similarity /// 0048002 // antigen processing and presentation of peptide antigen // inferred from electronic annotation /// 0048255 // mRNA stabilization // inferred from sequence or structural similarity /// 0048255 // mRNA stabilization // inferred from electronic annotation /// 0050766 // positive regulation of phagocytosis // inferred from sequence or structural similarity /// 0050766 // positive regulation of phagocytosis // inferred from electronic annotation /// 0050829 // defense response to Gram-negative bacterium // inferred from sequence or structural similarity /// 0050829 // defense response to Gram-negative bacterium // inferred from electronic annotation /// 0055072 // iron ion homeostasis // inferred from sequence or structural similarity /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0060586 // multicellular organismal iron ion homeostasis // inferred from sequence or structural similarity /// 0060586 // multicellular organismal iron ion homeostasis // inferred from electronic annotation /// 0070574 // cadmium ion transmembrane transport // inferred from genetic interaction /// 0070839 // divalent metal ion export // inferred from sequence or structural similarity /// 0070839 // divalent metal ion export // inferred from electronic annotation /// 0071421 // manganese ion transmembrane transport // inferred from sequence or structural similarity /// 0071421 // manganese ion transmembrane transport // inferred from electronic annotation","0005764 // lysosome // inferred from sequence or structural similarity /// 0005764 // lysosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from sequence or structural similarity /// 0005770 // late endosome // inferred from electronic annotation /// 0005773 // vacuole // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from mutant phenotype /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0009279 // cell outer membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // inferred from direct assay /// 0030670 // phagocytic vesicle membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // traceable author statement /// 0070821 // tertiary granule membrane // inferred from direct assay","0005215 // transporter activity // inferred from electronic annotation /// 0005384 // manganese ion transmembrane transporter activity // inferred from sequence or structural similarity /// 0005384 // manganese ion transmembrane transporter activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046915 // transition metal ion transmembrane transporter activity // inferred from genetic interaction /// 0051139 // metal ion:hydrogen antiporter activity // inferred from genetic interaction","chr2:219246973-219252721 (+) // 84.15 // q35"]
["11722524_s_at",0.06420994,-0.09337139,-0.040778637,0.09700966,-0.01640892,0.01640892,0.69167805,0.38629243,-1.0393271,-0.055649836,1.0393271,"down","TMCO4",255104,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:20008705-20113611 (-) // 87.5 // p36.13"]
["11716997_x_at",0.025334358,-0.0025568008,-0.066661835,0.0025568008,0.023516655,-0.03878784,0.9122664,0.7673564,-1.0072278,-0.010389977,1.0072278,"down","TSPAN4",7106,"0006461 // protein complex assembly // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:842823-867116 (+) // 97.83 // p15.5"]
["11717079_a_at",0.16605663,0.007317543,-0.007317543,0.18052387,-0.18688107,-0.04162979,0.82217294,0.58531654,1.0506978,0.07134779,1.0506978,"up","VPS52",6293,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","","chr6:33218048-33239701 (-) // 97.61 // p21.32"]
["11750705_a_at",0.47043324,-0.03802204,0.03802252,0.27545214,-0.15301704,-0.16279411,0.7523628,0.4714703,1.1252645,0.17026418,1.1252645,"up","OSBP2",23762,"0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation","chr22:31218502-31302701 (+) // 99.92 // q12.2"]
["11718627_at",0.16087961,-0.19527006,0.061877728,0.2435193,-0.061877728,-0.18499994,0.984089,0.9535274,1.0071523,0.010281889,1.0071523,"up","TRAK1",22906,"0006357 // regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006493 // protein O-linked glycosylation // inferred from sequence or structural similarity /// 0006605 // protein targeting // inferred from sequence or structural similarity /// 0008333 // endosome to lysosome transport // inferred from direct assay","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005769 // early endosome // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0050811 // GABA receptor binding // inferred from electronic annotation","chr3:42132745-42267381 (+) // 98.06 // p22.1"]
["11727110_a_at",-0.22762346,0,0,0.03538084,-0.07415867,0.10430908,0.6622439,0.34786072,-1.0700797,-0.09771823,1.0700797,"down","WSCD2",9671,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:108523119-108644311 (+) // 98.65 // q23.3"]
["11742650_at",0.014973164,-0.014973164,-0.032183886,0.03516245,-0.05088663,0.13776636,0.71092105,0.41240475,-1.0362762,-0.051408608,1.0362762,"down","DPRX",503834,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr19:54135309-54140263 (+) // 100.0 // q13.42"]
["11751513_a_at",-0.0750649,0.008064985,0.22778702,-0.008064985,-0.048947096,0.10431242,0.8945602,0.727764,1.0265678,0.037828937,1.0265678,"up","NME9",347736,"0006165 // nucleoside diphosphate phosphorylation // inferred from electronic annotation /// 0006183 // GTP biosynthetic process // inferred from electronic annotation /// 0006228 // UTP biosynthetic process // inferred from electronic annotation /// 0006241 // CTP biosynthetic process // inferred from electronic annotation /// 0045454 // cell redox homeostasis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0004550 // nucleoside diphosphate kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation","chr3:137980932-138048686 (-) // 94.51 // q22.3"]
["11724629_at",-0.07021713,-0.005378723,0.042499542,-0.018454552,0.03476429,0.005378723,0.85148597,0.63961,-1.0127385,-0.018261654,1.0127385,"down","TUSC1",286319,"","","","chr9:25676388-25678856 (-) // 96.9 // p21.2"]
["11745357_x_at",-0.20668793,0.1427927,-0.12541246,0.056263447,-0.056263447,0.12485838,0.7199787,0.42514837,-1.0752872,-0.104722075,1.0752872,"down","AP1S1",1174,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // traceable author statement /// 0009615 // response to virus // inferred from expression pattern /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral reproduction // traceable author statement /// 0016044 // cellular membrane organization // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0050690 // regulation of defense response to virus by virus // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0005765 // lysosomal membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation /// 0030121 // AP-1 adaptor complex // traceable author statement /// 0030130 // clathrin coat of trans-Golgi network vesicle // non-traceable author statement /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0008565 // protein transporter activity // inferred from electronic annotation","chr7:100799873-100804556 (+) // 94.28 // q22.1"]
["11729051_a_at",0.23679829,0.04333639,-0.04333639,0.34660912,-0.22772312,-0.23756838,0.83199424,0.60290056,1.0856007,0.1184936,1.0856007,"up","PPFIBP1",8496,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0015074 // DNA integration // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005886 // plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008907 // integrase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr12:27677044-27800910 (+) // 95.42 // p11.23"]
["11744232_a_at",0.17791843,0.08145046,0.10000229,-0.08145046,-0.113674164,-0.13769817,0.060277946,0.0023942774,1.1734296,0.2307313,1.1734296,"up","RFC5",5985,"0000075 // cell cycle checkpoint // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0000722 // telomere maintenance via recombination // traceable author statement /// 0000723 // telomere maintenance // traceable author statement /// 0006260 // DNA replication // non-traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement /// 0006281 // DNA repair // non-traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006297 // nucleotide-excision repair, DNA gap filling // traceable author statement /// 0032201 // telomere maintenance via semi-conservative replication // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005663 // DNA replication factor C complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0019899 // enzyme binding // non-traceable author statement","chr12:118454507-118471352 (+) // 83.8 // q24.23"]
["11731587_a_at",-0.022376537,0.13602829,-0.09753084,-0.08066559,0.022376537,0.19887638,0.88944906,0.7173871,-1.0291754,-0.04148888,1.0291754,"down","SEPT4",5414,"0000910 // cytokinesis // traceable author statement /// 0006184 // GTP catabolic process // traceable author statement /// 0006915 // apoptotic process // non-traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007286 // spermatid development // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0030382 // sperm mitochondrion organization // inferred from electronic annotation /// 0031398 // positive regulation of protein ubiquitination // inferred from direct assay /// 0042981 // regulation of apoptotic process // non-traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0048240 // sperm capacitation // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0009434 // microtubule-based flagellum // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005198 // structural molecule activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation","chr17:56597616-56609454 (-) // 99.39 // q22"]
["11730944_a_at",0.14236736,-0.104952574,0.060353994,0.0069453716,-0.08212638,-0.0069453716,0.7608999,0.48393908,1.0424405,0.059965085,1.0424405,"up","CCDC65",85478,"","","","chr12:49297892-49315354 (+) // 98.75 // q13.12"]
["11748495_a_at",0.096972466,-0.23235846,-0.19326353,0.15869045,-0.09697199,0.1191802,0.5836721,0.26384887,-1.124941,-0.16984932,1.124941,"down","OSR2",116039,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001656 // metanephros development // inferred from sequence or structural similarity /// 0001656 // metanephros development // inferred from electronic annotation /// 0001823 // mesonephros development // inferred from sequence or structural similarity /// 0001823 // mesonephros development // inferred from electronic annotation /// 0002062 // chondrocyte differentiation // inferred from sequence or structural similarity /// 0002062 // chondrocyte differentiation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from sequence or structural similarity /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009790 // embryo development // inferred from sequence or structural similarity /// 0009790 // embryo development // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from sequence or structural similarity /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030501 // positive regulation of bone mineralization // inferred from sequence or structural similarity /// 0030501 // positive regulation of bone mineralization // inferred from electronic annotation /// 0033687 // osteoblast proliferation // inferred from sequence or structural similarity /// 0033687 // osteoblast proliferation // inferred from electronic annotation /// 0035115 // embryonic forelimb morphogenesis // inferred from sequence or structural similarity /// 0035115 // embryonic forelimb morphogenesis // inferred from electronic annotation /// 0035116 // embryonic hindlimb morphogenesis // inferred from sequence or structural similarity /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0036023 // embryonic skeletal limb joint morphogenesis // inferred from sequence or structural similarity /// 0036023 // embryonic skeletal limb joint morphogenesis // inferred from electronic annotation /// 0042474 // middle ear morphogenesis // inferred from sequence or structural similarity /// 0042474 // middle ear morphogenesis // inferred from electronic annotation /// 0042476 // odontogenesis // inferred from sequence or structural similarity /// 0042476 // odontogenesis // inferred from electronic annotation /// 0042733 // embryonic digit morphogenesis // inferred from sequence or structural similarity /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048704 // embryonic skeletal system morphogenesis // inferred from sequence or structural similarity /// 0048704 // embryonic skeletal system morphogenesis // inferred from electronic annotation /// 0048793 // pronephros development // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from sequence or structural similarity /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0060021 // palate development // inferred from sequence or structural similarity /// 0060021 // palate development // inferred from electronic annotation /// 0060272 // embryonic skeletal joint morphogenesis // inferred from sequence or structural similarity /// 0060272 // embryonic skeletal joint morphogenesis // inferred from electronic annotation /// 0060322 // head development // inferred from sequence or structural similarity /// 0060322 // head development // inferred from electronic annotation /// 0060349 // bone morphogenesis // inferred from sequence or structural similarity /// 0060349 // bone morphogenesis // inferred from electronic annotation /// 0061029 // eyelid development in camera-type eye // inferred from sequence or structural similarity /// 0061029 // eyelid development in camera-type eye // inferred from electronic annotation /// 0072498 // embryonic skeletal joint development // inferred from sequence or structural similarity /// 0072498 // embryonic skeletal joint development // inferred from electronic annotation /// 2000543 // positive regulation of gastrulation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from sequence or structural similarity /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:99956669-99963990 (+) // 99.94 // q22.2"]
["11716172_at",0.26246452,-0.015514374,-0.13415241,0.20706463,0.015514374,-0.08111668,0.98304015,0.950576,-1.006645,-0.009554946,1.006645,"down","SYVN1",84447,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030433 // ER-associated protein catabolic process // inferred from direct assay /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:64893931-64902003 (-) // 96.38 // q13.1"]
["11762329_s_at",0.20333052,-0.2162199,-0.011936903,-0.05936098,0.011936903,0.1935997,0.88624316,0.7098378,-1.0403007,-0.057000637,1.0403007,"down","YME1L1",10730,"0006508 // proteolysis // inferred from electronic annotation /// 0006515 // misfolded or incompletely synthesized protein catabolic process // inferred from mutant phenotype /// 0006955 // immune response // non-traceable author statement /// 0006968 // cellular defense response // non-traceable author statement /// 0007005 // mitochondrion organization // inferred from mutant phenotype /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0030163 // protein catabolic process // inferred from electronic annotation /// 0031295 // T cell costimulation // traceable author statement /// 0045768 // positive regulation of anti-apoptosis // inferred from mutant phenotype /// 0050776 // regulation of immune response // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement","0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // non-traceable author statement /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042287 // MHC protein binding // non-traceable author statement /// 0042605 // peptide antigen binding // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:22465924-23019607 (+) // 99.04 // q11.2"]
["11734631_s_at",-0.0987649,0.011900425,0.039124966,-0.011900425,-0.022138119,0.15733194,0.7526144,0.47198576,-1.0403082,-0.057011053,1.0403082,"down","BAGE2 /// BAGE3 /// BAGE4 /// BAGE5 /// MLL3","58508 /// 85316 /// 85317 /// 85318 /// 85319","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016571 // histone methylation // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0051568 // histone H3-K4 methylation // inferred from direct assay /// 0051568 // histone H3-K4 methylation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0035097 // histone methyltransferase complex // inferred from direct assay /// 0035097 // histone methyltransferase complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from direct assay /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr21:11020476-11058324 (-) // 81.44 // p11.1"]
["11745505_x_at",0.34270763,-0.0922389,0.10066414,0.0922389,-0.19454241,-0.3685298,0.5249948,0.21082269,1.2091463,0.27398875,1.2091463,"up","ITSN1",6453,"0006897 // endocytosis // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042327 // positive regulation of phosphorylation // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048488 // synaptic vesicle endocytosis // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005905 // coated pit // inferred from direct assay /// 0005905 // coated pit // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // non-traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0019209 // kinase activator activity // inferred from electronic annotation /// 0032947 // protein complex scaffold // inferred from direct assay /// 0070064 // proline-rich region binding // inferred from physical interaction","chr21:35014705-35209342 (+) // 96.89 // q22.11"]
["11752694_x_at",0.045365334,0.09622002,0.11534691,-0.045365334,-0.15773964,-0.3843813,0.25888288,0.050682917,1.215435,0.28147277,1.215435,"up","PRR11",55771,"","","","chr17:57233117-57281195 (+) // 73.42 // q22"]
["11716637_at",-0.04485798,0.009160042,0.017030716,-0.005334854,-0.0022058487,0.0022058487,0.93904114,0.8315188,-1.0030851,-0.004444059,1.0030851,"down","EMC7",56851,"","0005737 // cytoplasm // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0072546 // ER membrane protein complex // inferred from direct assay","0004180 // carboxypeptidase activity // inferred from electronic annotation /// 0017076 // purine nucleotide binding // non-traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr15:34376217-34394149 (-) // 96.98 // q14"]
["11723720_at",-0.19245672,0.0791502,0.055794716,0.051767826,-0.2788267,-0.051767826,0.8319141,0.60262185,1.0524646,0.073771715,1.0524646,"up","SLAIN2",57606,"0007020 // microtubule nucleation // inferred from mutant phenotype /// 0031113 // regulation of microtubule polymerization // inferred from electronic annotation /// 0031116 // positive regulation of microtubule polymerization // inferred from mutant phenotype /// 0031122 // cytoplasmic microtubule organization // inferred from mutant phenotype /// 0031122 // cytoplasmic microtubule organization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0035371 // microtubule plus end // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr4:48342960-48428218 (+) // 98.62 // p11"]
["11740340_at",-0.20885038,-0.19670153,-0.056676865,0.056676865,0.2139225,0.07537031,0.15400791,0.01797923,-1.205306,-0.26939952,1.205306,"down","F2RL3",9002,"0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007200 // phospholipase C-activating G-protein coupled receptor signaling pathway // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007596 // blood coagulation // inferred from electronic annotation /// 0007599 // hemostasis // inferred from electronic annotation /// 0009611 // response to wounding // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0051281 // positive regulation of release of sequestered calcium ion into cytosol // inferred from direct assay /// 0060155 // platelet dense granule organization // inferred by curator /// 0070493 // thrombin receptor signaling pathway // traceable author statement /// 0070493 // thrombin receptor signaling pathway // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0015057 // thrombin receptor activity // inferred from electronic annotation /// 0015057 // thrombin receptor activity // traceable author statement","chr19:16999670-17009516 (+) // 59.58 // p13.11"]
["11747057_at",-0.14336967,-0.16602564,0.18190241,-0.43937683,0.14336967,0.2010374,0.98828304,0.9651769,-1.0075427,-0.010841024,1.0075427,"down","LOC100130539",100130539,"","","","chr10:44788197-44790179 (+) // 71.22 // q11.21"]
["11757203_at",0.09310627,-0.041403294,-0.11695218,0.01582098,-0.01582098,0.077672005,0.7830434,0.51800233,-1.033573,-0.04764033,1.033573,"down","RP11-165H20.1",149620,"","","","chr1:111823145-111828730 (+) // 90.51 // p13.2"]
["11762970_at",-0.0019831657,0.0019831657,-0.15613174,0.021390915,0.3381443,-0.14101934,0.73958355,0.4519627,-1.0904189,-0.12488252,1.0904189,"down",0.021390915,0.3381443,-0.14101934,-0.0019831657,0.0019831657,-0.15613174]
["11748711_a_at",0.27205753,0.16086769,0.18093681,-0.16086769,-0.35377026,-0.33333015,0.058389455,0.0022498665,1.4017963,0.48727676,1.4017963,"up","EIF4G3",8672,"0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006446 // regulation of translational initiation // traceable author statement /// 0007128 // meiotic prophase I // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016070 // RNA metabolic process // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0016281 // eukaryotic translation initiation factor 4F complex // traceable author statement","0000339 // RNA cap binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement","chr1:21133740-21296462 (-) // 96.55 // p36.12"]
["11715289_s_at",0.07645321,-0.03233862,-0.28163338,-0.081551075,0.03233862,0.123466015,0.73142284,0.4404085,-1.0746926,-0.103924066,1.0746926,"down","AGRP",181,"0007218 // neuropeptide signaling pathway // inferred from direct assay /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // traceable author statement /// 0007631 // feeding behavior // traceable author statement /// 0008343 // adult feeding behavior // inferred from electronic annotation /// 0009755 // hormone-mediated signaling pathway // inferred from electronic annotation /// 0060259 // regulation of feeding behavior // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005796 // Golgi lumen // inferred from direct assay /// 0005796 // Golgi lumen // inferred from electronic annotation","0005102 // receptor binding // traceable author statement /// 0005184 // neuropeptide hormone activity // inferred from direct assay /// 0005184 // neuropeptide hormone activity // inferred from electronic annotation /// 0005184 // neuropeptide hormone activity // traceable author statement","chr16:67516473-67517304 (-) // 96.09 // q22.1"]
["11730392_at",-0.010040283,-0.030519485,0.01004076,-0.086010456,0.092648506,0.17729473,0.71186125,0.41393062,-1.050797,-0.07148397,1.050797,"down","GPR4",2828,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement","chr19:46093021-46105466 (-) // 84.3 // q13.32"]
["11724261_a_at",0.2979498,0.06835604,-0.044844627,0.044844627,-0.28932667,-0.2781973,0.41816944,0.13182983,1.2153571,0.28138024,1.2153571,"up","TRIO",7204,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007185 // transmembrane receptor protein tyrosine phosphatase signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr5:14143810-14509520 (+) // 97.2 // p15.2"]
["11750884_a_at",0.18792439,0.058207512,-0.025650024,0.025650024,-0.13299179,-0.096404076,0.43947476,0.14593996,1.102982,0.14140931,1.102982,"up","AKAP8L",26993,"0016310 // phosphorylation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from direct assay /// 0016363 // nuclear matrix // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0017151 // DEAD/H-box RNA helicase binding // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:15490861-15529837 (-) // 98.5 // p13.12"]
["11754116_x_at",0.05118084,-0.013290405,0.013290644,-0.03980565,-0.055397034,0.14278793,0.9949454,0.9864452,1.0008311,0.001198565,1.0008311,"up","S100B",6285,"0007409 // axonogenesis // traceable author statement /// 0007417 // central nervous system development // traceable author statement /// 0007611 // learning or memory // inferred from sequence or structural similarity /// 0007611 // learning or memory // inferred from electronic annotation /// 0007613 // memory // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0048168 // regulation of neuronal synaptic plasticity // inferred from electronic annotation","0001726 // ruffle // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005102 // receptor binding // inferred from electronic annotation /// 0005509 // calcium ion binding // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from sequence or structural similarity /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0044548 // S100 protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048156 // tau protein binding // inferred from sequence or structural similarity /// 0048306 // calcium-dependent protein binding // inferred from direct assay /// 0050786 // RAGE receptor binding // inferred from physical interaction","chr21:48019287-48024977 (-) // 63.37 // q22.3"]
["11723098_a_at",-0.06387973,0.10885668,-0.0033462048,-0.18689847,0.0033462048,0.09852409,0.87609893,0.6887521,1.0296968,0.04221962,1.0296968,"up","VTCN1",79679,"0050868 // negative regulation of T cell activation // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005102 // receptor binding // inferred from electronic annotation","chr1:117686209-117753582 (-) // 87.14 // p13.1"]
["11748401_x_at",0.12541294,0.03645706,0.17408371,-0.03645706,-0.12706184,-0.099749565,0.13919938,0.014541326,1.148492,0.19974078,1.148492,"up","TPM4",7171,"0006928 // cellular component movement // traceable author statement /// 0006936 // muscle contraction // traceable author statement /// 0006979 // response to oxidative stress // inferred from expression pattern /// 0030049 // muscle filament sliding // traceable author statement","0001725 // stress fiber // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005862 // muscle thin filament tropomyosin // traceable author statement","0003779 // actin binding // inferred from electronic annotation /// 0005509 // calcium ion binding // non-traceable author statement /// 0008307 // structural constituent of muscle // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:16187304-16212764 (+) // 99.78 // p13.12"]
["11734319_a_at",0.15595055,-0.027225494,0.027225494,-0.12502551,-0.027225494,0.32391405,0.9910751,0.9732348,-1.003637,-0.0052375,1.003637,"down","SLC17A4",10050,"0006796 // phosphate-containing compound metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // traceable author statement /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005436 // sodium:phosphate symporter activity // traceable author statement /// 0015293 // symporter activity // inferred from electronic annotation","chr6:25754964-25781454 (+) // 86.64 // p22.2"]
["11718617_a_at",0.26770496,-0.011469841,-0.07337189,0.04202938,0.011469841,-0.06553459,0.8222384,0.5854963,1.0460604,0.06496622,1.0460604,"up","DNAJA4",55466,"0006457 // protein folding // inferred from electronic annotation /// 0009408 // response to heat // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation","0005524 // ATP binding // inferred from electronic annotation /// 0031072 // heat shock protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr15:78556427-78574538 (+) // 99.27 // q25.1"]
["11737511_a_at",0.006802559,0.110897064,-0.0635972,-0.006802559,0.14906979,-0.34413242,0.8349092,0.6093412,1.0609249,0.085322514,1.0609249,"up","SP100",6672,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006978 // DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator // inferred from direct assay /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0032526 // response to retinoic acid // inferred from direct assay /// 0032897 // negative regulation of viral transcription // inferred from direct assay /// 0034097 // response to cytokine stimulus // inferred from direct assay /// 0034340 // response to type I interferon // inferred from direct assay /// 0034340 // response to type I interferon // inferred from mutant phenotype /// 0034341 // response to interferon-gamma // inferred from direct assay /// 0034341 // response to interferon-gamma // inferred from mutant phenotype /// 0043392 // negative regulation of DNA binding // inferred from direct assay /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0048384 // retinoic acid receptor signaling pathway // inferred by curator /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051271 // negative regulation of cellular component movement // inferred from mutant phenotype /// 0060333 // interferon-gamma-mediated signaling pathway // inferred by curator /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon-mediated signaling pathway // inferred by curator","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from mutant phenotype /// 0005737 // cytoplasm // inferred from direct assay /// 0016605 // PML body // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation /// 0034399 // nuclear periphery // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019900 // kinase binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070087 // chromo shadow domain binding // inferred from physical interaction","chr2:231280870-231408300 (+) // 52.53 // q37.1"]
["11762783_at",-0.025516987,-0.051509857,0.3444848,0.025516987,-0.07054949,0.12899637,0.8744997,0.68529475,1.0433077,0.06116466,1.0433077,"up","RPL18A",6142,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // traceable author statement","chr19:17970729-17974962 (+) // 99.78 // p13.11"]
["11738568_at",0.08291197,-0.09436941,0.014431477,-0.19479561,0.06221533,-0.014431477,0.83835864,0.6157759,1.0352615,0.049995244,1.0352615,"up","KRTAP5-3",387266,"","0005882 // intermediate filament // inferred from electronic annotation /// 0045095 // keratin filament // inferred from electronic annotation","","chr11:1628310-1629693 (-) // 85.36 // p15.5"]
["11753154_a_at",0.06855965,-0.15686011,0.015416861,-0.015416861,-0.1181798,0.053042173,0.9920215,0.9772525,1.001774,0.0025570064,1.001774,"up","LHFPL1",340596,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chrX:111874276-111923274 (-) // 100.0 // q23"]
["11753258_s_at",0.22041225,0.21603107,0.09242821,-0.15034103,-0.32829666,-0.09242821,0.122568026,0.0112688495,1.2893517,0.36664584,1.2893517,"up","EGFL8 /// PPT2 /// PPT2-EGFL8","100532746 /// 80864 /// 9374","0001701 // in utero embryonic development // inferred from sequence or structural similarity /// 0006464 // cellular protein modification process // non-traceable author statement /// 0006464 // cellular protein modification process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005764 // lysosome // non-traceable author statement /// 0005764 // lysosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0016021 // integral to membrane // non-traceable author statement","0005509 // calcium ion binding // inferred from electronic annotation /// 0008474 // palmitoyl-(protein) hydrolase activity // non-traceable author statement /// 0008474 // palmitoyl-(protein) hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016790 // thiolester hydrolase activity // non-traceable author statement","chr6:32121846-32134009 (+) // 99.62 // p21.32"]
["11728877_s_at",0.25348473,-0.14388847,0.07107592,0.099732876,-0.07107592,-0.1560359,0.76902616,0.49603194,1.0737691,0.10268378,1.0737691,"up","ARID1B",57492,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0048096 // chromatin-mediated maintenance of transcription // non-traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016514 // SWI/SNF complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr6:157099085-157530396 (+) // 91.62 // q25.3"]
["11759126_a_at",-0.1716671,-0.15900326,-0.175251,0.15900326,0.25508595,0.18260765,0.024122445,0.00023317721,-1.2901505,-0.3675394,1.2901505,"down","THRA",7067,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0009755 // hormone-mediated signaling pathway // inferred from direct assay /// 0010467 // gene expression // traceable author statement /// 0010871 // negative regulation of receptor biosynthetic process // inferred from mutant phenotype /// 0017055 // negative regulation of RNA polymerase II transcriptional preinitiation complex assembly // inferred from direct assay /// 0030522 // intracellular receptor mediated signaling pathway // traceable author statement /// 0034144 // negative regulation of toll-like receptor 4 signaling pathway // inferred from mutant phenotype /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0071222 // cellular response to lipopolysaccharide // inferred from mutant phenotype /// 2000143 // negative regulation of transcription initiation, DNA-dependent // inferred from direct assay /// 2000189 // positive regulation of cholesterol homeostasis // inferred from direct assay","0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // traceable author statement /// 0004887 // thyroid hormone receptor activity // inferred from direct assay /// 0004887 // thyroid hormone receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0017025 // TBP-class protein binding // inferred from direct assay /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070324 // thyroid hormone binding // inferred from direct assay /// 0070324 // thyroid hormone binding // inferred from physical interaction","chr17:38219062-38249110 (+) // 97.76 // q21.1"]
["11726358_a_at",0.06251526,-0.23220873,-0.2564783,-0.008972168,0.008972168,0.025553703,0.53307825,0.21761617,-1.1100119,-0.15057519,1.1100119,"down","MLL5",55904,"0002446 // neutrophil mediated immunity // inferred from sequence or structural similarity /// 0002446 // neutrophil mediated immunity // inferred from electronic annotation /// 0006306 // DNA methylation // inferred from sequence or structural similarity /// 0006306 // DNA methylation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030218 // erythrocyte differentiation // inferred from sequence or structural similarity /// 0030218 // erythrocyte differentiation // inferred from electronic annotation /// 0030854 // positive regulation of granulocyte differentiation // inferred from mutant phenotype /// 0032259 // methylation // inferred from electronic annotation /// 0034968 // histone lysine methylation // inferred from electronic annotation /// 0042119 // neutrophil activation // inferred from sequence or structural similarity /// 0042119 // neutrophil activation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0048384 // retinoic acid receptor signaling pathway // inferred from mutant phenotype /// 0051568 // histone H3-K4 methylation // inferred from direct assay /// 0071300 // cellular response to retinoic acid // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation /// 0070688 // MLL5-L complex // inferred from direct assay","0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:104654630-104754808 (+) // 99.4 // q22.3"]
["11731654_at",0.48307228,0.035779476,0.22057867,-0.14223766,-0.035779953,-0.30711222,0.26928654,0.05480522,1.327017,0.4081868,1.327017,"up","ARL15",54622,"0007264 // small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr5:53180213-53606426 (-) // 90.25 // q11.2"]
["11740827_at",0.05487299,-0.020530224,0.05500412,-0.07823682,0.020530224,-0.036499023,0.49056214,0.18364848,1.0433217,0.06118411,1.0433217,"up","HES3",390992,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0021555 // midbrain-hindbrain boundary morphogenesis // inferred from electronic annotation /// 0021557 // oculomotor nerve development // inferred from electronic annotation /// 0021558 // trochlear nerve development // inferred from electronic annotation /// 0021575 // hindbrain morphogenesis // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0030901 // midbrain development // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0060164 // regulation of timing of neuron differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0008134 // transcription factor binding // non-traceable author statement","chr1:6304253-6305638 (+) // 96.84 // p36.31"]
["11726673_s_at",-0.2685814,-0.13599443,0.028261662,-0.028261662,0.11492896,0.1664896,0.3869332,0.113196425,-1.1565468,-0.20982368,1.1565468,"down","ASCL1",429,"0001764 // neuron migration // inferred from electronic annotation /// 0003359 // noradrenergic neuron fate commitment // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from direct assay /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007400 // neuroblast fate determination // inferred from electronic annotation /// 0007405 // neuroblast proliferation // inferred from electronic annotation /// 0008593 // regulation of Notch signaling pathway // inferred from electronic annotation /// 0010001 // glial cell differentiation // inferred from electronic annotation /// 0010226 // response to lithium ion // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0014003 // oligodendrocyte development // inferred from electronic annotation /// 0021527 // spinal cord association neuron differentiation // inferred from electronic annotation /// 0021530 // spinal cord oligodendrocyte cell fate specification // inferred from electronic annotation /// 0021750 // vestibular nucleus development // inferred from electronic annotation /// 0021779 // oligodendrocyte cell fate commitment // inferred from electronic annotation /// 0021879 // forebrain neuron differentiation // inferred from electronic annotation /// 0021892 // cerebral cortex GABAergic interneuron differentiation // inferred from expression pattern /// 0021954 // central nervous system neuron development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from direct assay /// 0022008 // neurogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from expression pattern /// 0032526 // response to retinoic acid // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from direct assay /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from sequence or structural similarity /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045747 // positive regulation of Notch signaling pathway // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048485 // sympathetic nervous system development // non-traceable author statement /// 0048663 // neuron fate commitment // inferred from electronic annotation /// 0048665 // neuron fate specification // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation /// 0048709 // oligodendrocyte differentiation // inferred from electronic annotation /// 0050769 // positive regulation of neurogenesis // inferred from electronic annotation /// 0051593 // response to folic acid // inferred from electronic annotation /// 0060163 // subpallium neuron fate commitment // inferred from electronic annotation /// 0060165 // regulation of timing of subpallium neuron differentiation // inferred from electronic annotation /// 0060166 // olfactory pit development // inferred from electronic annotation /// 0060487 // lung epithelial cell differentiation // non-traceable author statement /// 0061100 // lung neuroendocrine cell differentiation // inferred from electronic annotation /// 0061102 // stomach neuroendocrine cell differentiation // inferred from electronic annotation /// 0061103 // carotid body glomus cell differentiation // inferred from electronic annotation /// 0061104 // adrenal chromaffin cell differentiation // inferred from electronic annotation /// 0070849 // response to epidermal growth factor stimulus // inferred from electronic annotation /// 0071259 // cellular response to magnetism // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0000989 // transcription factor binding transcription factor activity // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043425 // bHLH transcription factor binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0070888 // E-box binding // inferred from direct assay","chr12:103351421-103354291 (+) // 93.85 // q23.2"]
["11726507_a_at",0.23193836,0.31308365,0.11448765,-0.13279533,-0.18403912,-0.11448765,0.07621389,0.0040466418,1.2866418,0.3636105,1.2866418,"up","CDKN2B",1030,"0000079 // regulation of cyclin-dependent protein kinase activity // inferred from direct assay /// 0000080 // G1 phase of mitotic cell cycle // traceable author statement /// 0000086 // G2/M transition of mitotic cell cycle // inferred from mutant phenotype /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030219 // megakaryocyte differentiation // inferred from expression pattern /// 0030511 // positive regulation of transforming growth factor beta receptor signaling pathway // inferred from mutant phenotype /// 0030858 // positive regulation of epithelial cell differentiation // inferred from electronic annotation /// 0031575 // mitotic cell cycle G1/S transition checkpoint // inferred from mutant phenotype /// 0031668 // cellular response to extracellular stimulus // inferred from mutant phenotype /// 0031670 // cellular response to nutrient // inferred from mutant phenotype /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0042326 // negative regulation of phosphorylation // inferred from direct assay /// 0050680 // negative regulation of epithelial cell proliferation // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004861 // cyclin-dependent protein kinase inhibitor activity // inferred from direct assay /// 0004861 // cyclin-dependent protein kinase inhibitor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction","chr9:22002897-22009312 (-) // 92.18 // p21.3"]
["11754200_a_at",-0.009834766,0.08136177,0.009834766,-0.08384895,-0.058557987,0.013865471,0.45529512,0.15764576,1.0496932,0.06996776,1.0496932,"up","CREBBP",1387,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001666 // response to hypoxia // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006461 // protein complex assembly // traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008589 // regulation of smoothened signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016573 // histone acetylation // inferred from direct assay /// 0016573 // histone acetylation // inferred from electronic annotation /// 0018076 // N-terminal peptidyl-lysine acetylation // inferred from direct assay /// 0030718 // germ-line stem cell maintenance // inferred from electronic annotation /// 0033261 // regulation of S phase // inferred from electronic annotation /// 0042592 // homeostatic process // non-traceable author statement /// 0042733 // embryonic digit morphogenesis // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0000123 // histone acetyltransferase complex // inferred from electronic annotation /// 0000790 // nuclear chromatin // inferred from direct assay /// 0000940 // condensed chromosome outer kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0016604 // nuclear body // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation","0000987 // core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0001085 // RNA polymerase II transcription factor binding // inferred from physical interaction /// 0001102 // RNA polymerase II activating transcription factor binding // traceable author statement /// 0001105 // RNA polymerase II transcription coactivator activity // traceable author statement /// 0001191 // RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0002039 // p53 binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003712 // transcription cofactor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from physical interaction /// 0003713 // transcription coactivator activity // traceable author statement /// 0004402 // histone acetyltransferase activity // inferred from direct assay /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016407 // acetyltransferase activity // inferred from direct assay /// 0016407 // acetyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0042975 // peroxisome proliferator activated receptor binding // inferred from electronic annotation /// 0043426 // MRF binding // inferred from direct assay /// 0046332 // SMAD binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:3776568-3930711 (-) // 96.55 // p13.3"]
["11734372_at",-0.23709106,0.0263834,0.1718688,-0.09039259,-0.0263834,0.18199587,0.9355929,0.8229462,-1.0243341,-0.03468631,1.0243341,"down","MBLAC1",255374,"","","0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:99724319-99726123 (+) // 90.38 // q22.1"]
["11749484_a_at",0.035755396,-0.13707042,0.09470773,-0.035755396,-0.15858555,0.1450603,0.9659573,0.90532684,1.0099084,0.0142244985,1.0099084,"up","AXDND1",126859,"","","","chr1:179334875-179460786 (+) // 94.59 // q25.2"]
["11726396_x_at",-0.3965521,-0.4218974,-0.19364023,0.19364023,0.40588856,0.28361225,0.06334717,0.00264187,-1.5494365,-0.63174355,1.5494365,"down","KAL1",3730,"0006928 // cellular component movement // traceable author statement /// 0006935 // chemotaxis // traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // traceable author statement /// 0005615 // extracellular space // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005201 // extracellular matrix structural constituent // traceable author statement /// 0008201 // heparin binding // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chrX:8496915-8700228 (-) // 92.89 // p22.31"]
["11730793_a_at",-0.08958888,-0.2532277,0.12584162,-0.043625593,0.04362583,0.32817483,0.6298964,0.3115115,-1.1342328,-0.18171673,1.1342328,"down","MRPL4",51073,"0006412 // translation // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from electronic annotation","chr19:10362635-10370733 (+) // 78.28 // p13.2"]
["11720741_a_at",-0.088562965,0.2106266,0.03258133,-0.03258133,0.11488485,-0.104922295,0.8375759,0.61439663,1.0418069,0.059087947,1.0418069,"up","ZNF605",100289635,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:133497860-133532892 (-) // 66.82 // q24.33"]
["11762500_at",0.30014944,-0.039693356,0.023087978,0.18466139,-0.16918397,-0.023087978,0.79814917,0.54368883,1.0695853,0.097051576,1.0695853,"up","WWC1",23286,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016477 // cell migration // inferred from direct assay /// 0035329 // hippo signaling cascade // traceable author statement /// 0035330 // regulation of hippo signaling cascade // inferred from mutant phenotype /// 0043410 // positive regulation of MAPK cascade // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from direct assay /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003713 // transcription coactivator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr5:167841076-167843527 (+) // 66.93 // q34"]
["11756966_a_at",-0.13580084,-0.027686357,0.03592944,0.0074105263,-0.0074105263,0.032416582,0.6704032,0.35858688,-1.0376536,-0.05332486,1.0376536,"down","FAM194A",131831,"","","","chr3:150377676-150400106 (-) // 73.93 // q25.1"]
["11722595_a_at",0.09187126,-0.019651413,0.060466766,0.01640892,-0.01640892,-0.075722694,0.48524427,0.17963766,1.049331,0.069469765,1.049331,"up","AKAP13",11214,"0006915 // apoptotic process // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0004691 // cAMP-dependent protein kinase activity // non-traceable author statement /// 0004871 // signal transducer activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:85923832-86292586 (+) // 98.27 // q25.3"]
["11742364_at",0.007508278,-0.007508278,0.035343647,-0.03554368,0.073135376,-0.03554368,0.91987646,0.7865997,1.0077226,0.0110985795,1.0077226,"up","OR5AR1",219493,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:56431137-56432163 (+) // 100.0 // q12.1"]
["11718080_a_at",0.094730854,0.2773471,0.2807622,-0.19181013,-0.1272664,-0.094730854,0.09352109,0.0063053803,1.2794726,0.35554925,1.2794726,"up","BCL2L11",10018,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0001776 // leukocyte homeostasis // inferred from electronic annotation /// 0001782 // B cell homeostasis // inferred from electronic annotation /// 0001783 // B cell apoptotic process // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0002260 // lymphocyte homeostasis // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006917 // induction of apoptosis // traceable author statement /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0030879 // mammary gland development // inferred from electronic annotation /// 0032464 // positive regulation of protein homooligomerization // inferred from direct assay /// 0035148 // tube formation // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043029 // T cell homeostasis // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0043583 // ear development // inferred from electronic annotation /// 0045787 // positive regulation of cell cycle // inferred from electronic annotation /// 0046620 // regulation of organ growth // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048066 // developmental pigmentation // inferred from electronic annotation /// 0048070 // regulation of developmental pigmentation // inferred from electronic annotation /// 0048536 // spleen development // inferred from electronic annotation /// 0048538 // thymus development // inferred from electronic annotation /// 0048563 // post-embryonic organ morphogenesis // inferred from electronic annotation /// 0060154 // cellular process regulating host cell cycle in response to virus // inferred from electronic annotation /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from genetic interaction /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from mutant phenotype /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype","0000300 // peripheral to membrane of membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005874 // microtubule // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0097140 // BIM-BCL-xl complex // inferred from direct assay /// 0097141 // BIM-BCL-2 complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from direct assay /// 0008017 // microtubule binding // inferred from electronic annotation","chr2:111878490-111926021 (+) // 97.66 // q13"]
["11728554_at",-0.34100103,0.23862743,0.06364679,-0.15988255,0.10358477,-0.06364679,0.9619123,0.89252687,1.0189425,0.027072607,1.0189425,"up","ATP6V1E2 /// FLJ41757","440862 /// 90423","0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0033572 // transferrin transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0033178 // proton-transporting two-sector ATPase complex, catalytic domain // inferred from electronic annotation","0008553 // hydrogen-exporting ATPase activity, phosphorylative mechanism // inferred from electronic annotation /// 0046961 // proton-transporting ATPase activity, rotational mechanism // inferred from electronic annotation","chr2:46738985-46747176 (-) // 68.68 // p21"]
["11737957_a_at",-0.24391699,0.16206932,0.066060066,-0.18975449,-0.050216198,0.050216198,0.8824746,0.7017276,1.0410136,0.057988912,1.0410136,"up","DUSP15",128853,"0006470 // protein dephosphorylation // not recorded /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // not recorded /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr20:30448879-30458547 (-) // 96.85 // q11.21"]
["11721231_a_at",-0.03258896,-0.23835373,-0.0008559227,0.2309804,0.014907837,0.0008559227,0.48067823,0.17604919,-1.1272813,-0.17284757,1.1272813,"down","METTL21D",79609,"0032259 // methylation // inferred from electronic annotation","","0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr14:50575354-50583318 (-) // 98.2 // q21.3"]
["11755527_x_at",0.022600174,0.010755539,-0.010755539,0.1527214,-0.0117378235,-0.033359528,0.861622,0.65901566,-1.0198389,-0.028341314,1.0198389,"down","PRPSAP2",5636,"0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0009165 // nucleotide biosynthetic process // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // traceable author statement","0043234 // protein complex // inferred from electronic annotation","0000287 // magnesium ion binding // inferred from electronic annotation /// 0004749 // ribose phosphate diphosphokinase activity // inferred from electronic annotation /// 0004857 // enzyme inhibitor activity // traceable author statement","chr17:18759611-18834524 (+) // 95.54 // p11.2"]
["11729333_at",-0.045109272,0.21860456,0.06581831,-0.25336266,-0.35126257,0.045109272,0.41990092,0.13323237,1.2026998,0.26627657,1.2026998,"up","PADI1",29943,"0006464 // cellular protein modification process // inferred from electronic annotation /// 0018101 // peptidyl-citrulline biosynthetic process from peptidyl-arginine // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0004668 // protein-arginine deiminase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr1:17531289-17572502 (+) // 99.31 // p36.13"]
["11763951_at",0.21898413,0.039206505,-0.07170439,-0.31324196,-0.03920698,0.25563478,0.8499314,0.6362742,1.067646,0.094433405,1.067646,"up","LINC00235",64493,"","","","chr16:576846-577407 (+) // 100.0 // p13.3"]
["11726044_a_at",-0.062285423,0.026792526,-0.026793003,0.11703205,-0.045053482,0.10236502,0.563931,0.2445809,-1.0561953,-0.07887657,1.0561953,"down","AGER",177,"0006954 // inflammatory response // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007259 // JAK-STAT cascade // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0009611 // response to wounding // traceable author statement /// 0010763 // positive regulation of fibroblast migration // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from genetic interaction /// 0031175 // neuron projection development // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred from electronic annotation /// 0050930 // induction of positive chemotaxis // inferred from electronic annotation /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0055074 // calcium ion homeostasis // inferred from electronic annotation /// 0055093 // response to hyperoxia // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // non-traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009925 // basal plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044548 // S100 protein binding // inferred from physical interaction /// 0050785 // advanced glycation end-product receptor activity // inferred from electronic annotation","chr6:32148746-32152517 (-) // 88.71 // p21.32"]
["11752814_s_at",0.21264553,0.062325478,-0.113451004,0.054121017,-0.13861084,-0.054121017,0.7109506,0.41260326,1.0718058,0.10004357,1.0718058,"up","TNFRSF1A",7132,"0001666 // response to hypoxia // inferred from electronic annotation /// 0006693 // prostaglandin metabolic process // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006952 // defense response // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from sequence or structural similarity /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0009611 // response to wounding // inferred from electronic annotation /// 0009812 // flavonoid metabolic process // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0016101 // diterpenoid metabolic process // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from sequence or structural similarity /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032715 // negative regulation of interleukin-6 production // inferred from electronic annotation /// 0032760 // positive regulation of tumor necrosis factor production // inferred from electronic annotation /// 0033013 // tetrapyrrole metabolic process // inferred from electronic annotation /// 0033160 // positive regulation of protein import into nucleus, translocation // inferred from electronic annotation /// 0033209 // tumor necrosis factor-mediated signaling pathway // traceable author statement /// 0033209 // tumor necrosis factor-mediated signaling pathway // inferred from electronic annotation /// 0042511 // positive regulation of tyrosine phosphorylation of Stat1 protein // inferred from mutant phenotype /// 0042742 // defense response to bacterium // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0043200 // response to amino acid stimulus // inferred from electronic annotation /// 0043279 // response to alkaloid // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0050728 // negative regulation of inflammatory response // inferred from mutant phenotype /// 0050729 // positive regulation of inflammatory response // inferred from sequence or structural similarity /// 0050729 // positive regulation of inflammatory response // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern /// 0071392 // cellular response to estradiol stimulus // inferred from electronic annotation","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay /// 0045121 // membrane raft // inferred from electronic annotation","0002020 // protease binding // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005031 // tumor necrosis factor-activated receptor activity // traceable author statement /// 0005031 // tumor necrosis factor-activated receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043120 // tumor necrosis factor binding // inferred from electronic annotation","chr12:6438310-6451170 (-) // 91.84 // p13.31"]
["11734315_a_at",-0.14293551,0.10356808,0.020112514,-0.036412477,0.06759381,-0.020112514,0.9658463,0.90468055,-1.0070308,-0.010107873,1.0070308,"down","KIAA1456",57604,"0008152 // metabolic process // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation","","0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr8:12803182-12887286 (+) // 80.04 // p22"]
["11733572_at",-0.09680176,0.104931355,0.040857792,-0.17665625,0.004758835,-0.004758835,0.7168439,0.4199958,1.0535177,0.07521455,1.0535177,"up","DMRT3",58524,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007548 // sex differentiation // non-traceable author statement /// 0007548 // sex differentiation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:976963-991732 (+) // 94.19 // p24.3"]
["11716953_at",0.0014266968,-0.005261421,0.011537552,0.0071353912,-0.0135269165,-0.0014266968,0.7957372,0.54000217,1.0035926,0.005173753,1.0035926,"up","TMEM126A",84233,"0021554 // optic nerve development // inferred from mutant phenotype","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:85358962-85367586 (+) // 93.94 // q14.1"]
["11717321_at",-0.05637455,0.035014153,-0.16096926,0.19821787,-0.03501463,0.04523182,0.53137434,0.21632156,-1.0944871,-0.13025491,1.0944871,"down","OAF",220323,"","","","chr11:120081474-120101039 (+) // 87.07 // q23.3"]
["11760525_at",-0.24513054,-0.026470661,0.026470661,-0.37817907,0.039232254,0.3488531,0.8938104,0.72641563,-1.0606967,-0.08501221,1.0606967,"down","","","","","","chr3:99651964-99654108 (+) // 70.88 // q12.1"]
["11755164_a_at",-0.047269106,-0.0971787,0.012901068,-0.012900829,0.047435522,0.021675587,0.45838004,0.15984607,-1.0443358,-0.062585734,1.0443358,"down","LEFTY1",10637,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0003007 // heart morphogenesis // inferred from sequence or structural similarity /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from sequence or structural similarity /// 0016049 // cell growth // inferred from electronic annotation /// 0040007 // growth // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0005160 // transforming growth factor beta receptor binding // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation","chr1:226073981-226076846 (-) // 98.3 // q42.12"]
["11741841_a_at",0.12481499,-0.07059717,0.002840519,-0.002840519,0.07627869,-0.002840519,0.98135996,0.9461546,-1.0031332,-0.0045131533,1.0031332,"down","C10orf71",118461,"","","","chr10:50507186-50535537 (+) // 98.12 // q11.23"]
["11735679_a_at",0.050040245,-0.12960386,-0.20721102,0.08133888,0.059625626,-0.050040245,0.5342411,0.21860676,-1.091188,-0.12589963,1.091188,"down","ACOT8",10005,"0006637 // acyl-CoA metabolic process // inferred from electronic annotation /// 0006699 // bile acid biosynthetic process // traceable author statement /// 0007031 // peroxisome organization // inferred from electronic annotation /// 0008206 // bile acid metabolic process // traceable author statement /// 0033540 // fatty acid beta-oxidation using acyl-CoA oxidase // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005777 // peroxisome // inferred from electronic annotation /// 0005782 // peroxisomal matrix // inferred from direct assay /// 0005782 // peroxisomal matrix // inferred from mutant phenotype /// 0005782 // peroxisomal matrix // traceable author statement","0004091 // carboxylesterase activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0033882 // choloyl-CoA hydrolase activity // inferred from electronic annotation /// 0047617 // acyl-CoA hydrolase activity // inferred from direct assay /// 0047617 // acyl-CoA hydrolase activity // inferred from electronic annotation","chr20:44470360-44486035 (-) // 100.0 // q13.12"]
["11742545_at",0.19452953,-0.20899773,-0.09082317,0.012015104,0.06550622,-0.012015343,0.8642211,0.6648904,-1.0402516,-0.056932524,1.0402516,"down","OR5R1",219479,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:56184733-56185708 (-) // 100.0 // q12.1"]
["11761549_at",0.22623777,0,-0.16833735,-0.2233243,0,0.017816544,0.8075854,0.559612,1.0627503,0.087802716,1.0627503,"up","TMED3",23423,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030126 // COPI vesicle coat // inferred from sequence or structural similarity /// 0030663 // COPI coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation","","chr15:79603486-79606347 (+) // 46.02 // q25.1"]
["11723885_at",0.103270054,-0.09954929,0.32280207,0.09954929,-0.21787405,-0.20853138,0.5655292,0.24622393,1.1629531,0.21779296,1.1629531,"up","C17orf103",256302,"","","","chr17:21142182-21156722 (-) // 82.25 // p11.2"]
["11729457_a_at",-0.14841366,0.058137894,-0.19061661,-0.038093567,0.038093567,0.25870037,0.5128928,0.20084795,-1.1327773,-0.1798643,1.1327773,"down","BCL6B",255877,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:6926338-6932961 (+) // 97.69 // p13.1"]
["11733224_at",-0.15561485,-0.19333649,0.054000378,-0.014226437,0.014226437,0.121507645,0.49524492,0.18713132,-1.1010039,-0.13881956,1.1010039,"down","ZNF71",58491,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:57106647-57135790 (+) // 88.57 // q13.43"]
["11734383_a_at",0.0040102005,0.3696537,0.2780342,-0.18752909,-0.0040102005,-0.012076378,0.33537382,0.08488122,1.2184986,0.28510457,1.2184986,"up","AQP10",89872,"0006810 // transport // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0006833 // water transport // inferred from electronic annotation /// 0009636 // response to toxin // inferred from direct assay /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation","chr1:154293568-154297801 (+) // 99.29 // q21.3"]
["11743466_at",-0.14167595,0.0038909912,-0.0038909912,0.13222027,0.04469776,-0.016493797,0.49997905,0.1907933,-1.0722936,-0.10070003,1.0722936,"down","MPHOSPH6",10200,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000460 // maturation of 5.8S rRNA // inferred from mutant phenotype /// 0006364 // rRNA processing // inferred from electronic annotation","0000176 // nuclear exosome (RNase complex) // traceable author statement /// 0000178 // exosome (RNase complex) // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr16:82181766-82203831 (-) // 96.08 // q23.3"]
["11748500_a_at",-0.013825178,0.020264387,0.013825178,-0.14294171,-0.069152355,0.08020997,0.76327574,0.48795813,1.035779,0.050716214,1.035779,"up","ENPP5",59084,"0007154 // cell communication // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr6:46128730-46138708 (-) // 95.89 // p21.1"]
["11737939_a_at",-0.049589157,-0.1154933,-0.24226141,0.049589157,0.11753607,0.2106514,0.17607495,0.02338859,-1.1988963,-0.26170686,1.1988963,"down","RIPK1",8737,"0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from direct assay /// 0006915 // apoptotic process // traceable author statement /// 0006917 // induction of apoptosis // inferred from mutant phenotype /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0010940 // positive regulation of necrotic cell death // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0032757 // positive regulation of interleukin-8 production // inferred from direct assay /// 0032760 // positive regulation of tumor necrosis factor production // inferred from direct assay /// 0033209 // tumor necrosis factor-mediated signaling pathway // inferred by curator /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034612 // response to tumor necrosis factor // inferred from mutant phenotype /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0042327 // positive regulation of phosphorylation // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043068 // positive regulation of programmed cell death // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0045087 // innate immune response // traceable author statement /// 0045768 // positive regulation of anti-apoptosis // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0060545 // positive regulation of necroptosis // inferred from mutant phenotype /// 0060555 // induction of necroptosis by extracellular signals // inferred from mutant phenotype /// 0070926 // regulation of ATP:ADP antiporter activity // inferred from mutant phenotype /// 2000379 // positive regulation of reactive oxygen species metabolic process // traceable author statement /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype /// 2001238 // positive regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype /// 2001243 // negative regulation of intrinsic apoptotic signaling pathway // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031264 // death-inducing signaling complex // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0043235 // receptor complex // inferred from direct assay /// 0045121 // membrane raft // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005123 // death receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0070513 // death domain binding // inferred from physical interaction","chr6:3064121-3115421 (+) // 87.6 // p25.2"]
["11736630_at",-0.038555622,0.037690163,-0.037690163,-0.19656563,0.19209719,0.06442356,0.9226849,0.79312235,-1.0230218,-0.032836914,1.0230218,"down","BTBD17",388419,"","0005576 // extracellular region // inferred from electronic annotation","","chr17:72352554-72357958 (-) // 99.88 // q25.1"]
["11759163_at",0.011454105,-0.011214733,-0.11881924,-0.14304066,0.19661212,0.011214733,0.8282831,0.59539217,-1.0432768,-0.061121963,1.0432768,"down","CDH23 /// LOC100653137","100653137 /// 64072","0006816 // calcium ion transport // inferred from mutant phenotype /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from mutant phenotype /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0016339 // calcium-dependent cell-cell adhesion // non-traceable author statement /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0042491 // auditory receptor cell differentiation // inferred from electronic annotation /// 0045494 // photoreceptor cell maintenance // inferred from mutant phenotype /// 0048563 // post-embryonic organ morphogenesis // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050953 // sensory perception of light stimulus // inferred from mutant phenotype /// 0050953 // sensory perception of light stimulus // inferred from electronic annotation /// 0050957 // equilibrioception // inferred from mutant phenotype /// 0051480 // cytosolic calcium ion homeostasis // inferred from mutant phenotype /// 0060088 // auditory receptor cell stereocilium organization // inferred from electronic annotation","0001917 // photoreceptor inner segment // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032420 // stereocilium // inferred from sequence or structural similarity /// 0032420 // stereocilium // inferred from electronic annotation /// 0032426 // stereocilium bundle tip // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr10:73156690-73407219 (+) // 84.54 // q22.1"]
["11724145_a_at",0.18824482,-0.12821579,-0.1795783,0.45023727,0.12821579,-0.18829775,0.7565336,0.47791654,-1.1249816,-0.16990146,1.1249816,"down","SLC37A1",54020,"0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation","chr21:43919738-44001536 (+) // 96.15 // q22.3"]
["11738915_x_at",0.008880377,-0.11386418,0.008880377,0.09284067,-0.021803856,-0.008880615,0.6942248,0.3891847,-1.0372425,-0.05275327,1.0372425,"down","CD200R1",131450,"0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0050776 // regulation of immune response // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr3:112647764-112693937 (-) // 100.0 // q13.2"]
["11750788_a_at",0.15031528,0.011122704,0.18667746,-0.07934189,-0.14432812,-0.011122227,0.23534344,0.042007975,1.1441709,0.19430253,1.1441709,"up","CSNK1G1",53944,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr15:64457935-64665968 (-) // 100.0 // q22.31"]
["11761080_at",-0.077049255,0.15952301,-0.3246348,0.40112734,-0.024513721,0.024513721,0.6477172,0.33091995,-1.160245,-0.21442941,1.160245,"down","SGSH",6448,"0006029 // proteoglycan metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation","0003824 // catalytic activity // traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation /// 0008484 // sulfuric ester hydrolase activity // inferred from electronic annotation /// 0016250 // N-sulfoglucosamine sulfohydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:78184362-78194137 (-) // 83.41 // q25.3"]
["11734519_x_at",-0.021096945,0.082915545,-0.19658685,-0.14915037,0.021096945,0.1249342,0.8911334,0.7202672,-1.0308847,-0.04388304,1.0308847,"down","PAGE2",203569,"","","","chrX:55115440-55119269 (+) // 97.5 // p11.21"]
["11755661_a_at",-0.030735254,0.08487916,-0.11118555,0.104316235,-0.1619525,0.030735254,0.9727694,0.92302316,-1.0069883,-0.010046902,1.0069883,"down","KCNMA1",3778,"0001666 // response to hypoxia // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from direct assay /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006970 // response to osmotic stress // inferred from direct assay /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030007 // cellular potassium ion homeostasis // inferred from direct assay /// 0034465 // response to carbon monoxide // inferred from direct assay /// 0034465 // response to carbon monoxide // inferred from mutant phenotype /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0042391 // regulation of membrane potential // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0045794 // negative regulation of cell volume // inferred from direct assay /// 0051592 // response to calcium ion // inferred from direct assay /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0060073 // micturition // inferred from direct assay /// 0060083 // smooth muscle contraction involved in micturition // inferred from direct assay /// 0071805 // potassium ion transmembrane transport // not recorded /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005901 // caveola // inferred from direct assay /// 0008076 // voltage-gated potassium channel complex // inferred from direct assay /// 0008076 // voltage-gated potassium channel complex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from direct assay /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005249 // voltage-gated potassium channel activity // inferred from direct assay /// 0005249 // voltage-gated potassium channel activity // inferred from electronic annotation /// 0005267 // potassium channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015269 // calcium-activated potassium channel activity // inferred from direct assay /// 0015269 // calcium-activated potassium channel activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0060072 // large conductance calcium-activated potassium channel activity // inferred from direct assay /// 0060072 // large conductance calcium-activated potassium channel activity // inferred from mutant phenotype /// 0060072 // large conductance calcium-activated potassium channel activity // inferred from electronic annotation","chr10:78637357-78943237 (-) // 98.39 // q22.3"]
["11716025_a_at",0.15185738,0.071196556,0.04122448,-0.04122448,-0.23878384,-0.22296143,0.17533067,0.023204206,1.1939558,0.2557494,1.1939558,"up","GOLGA7",51125,"","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","","chr8:41348134-41368499 (+) // 96.01 // p11.21"]
["11726963_s_at",-0.15326929,-0.24635744,0.009943485,0.17951298,0.092452526,-0.009943485,0.3233469,0.079260744,-1.1625035,-0.21723503,1.1625035,"down","SGTB",54557,"","","","chr5:64961756-65017940 (-) // 70.79 // q12.3"]
["11732950_a_at",0.06112814,0.04139757,-0.04139757,0.13396692,-0.47306442,-0.23068094,0.62522596,0.3056549,1.1569304,0.21030213,1.1569304,"up","AHI1",54806,"0001738 // morphogenesis of a polarized epithelium // inferred from sequence or structural similarity /// 0001947 // heart looping // inferred from sequence or structural similarity /// 0002092 // positive regulation of receptor internalization // inferred from sequence or structural similarity /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from sequence or structural similarity /// 0007417 // central nervous system development // inferred from sequence or structural similarity /// 0010842 // retina layer formation // inferred from sequence or structural similarity /// 0016192 // vesicle-mediated transport // inferred from sequence or structural similarity /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0030030 // cell projection organization // inferred from electronic annotation /// 0030862 // positive regulation of polarized epithelial cell differentiation // inferred from sequence or structural similarity /// 0030902 // hindbrain development // inferred from sequence or structural similarity /// 0033365 // protein localization to organelle // inferred from electronic annotation /// 0034613 // cellular protein localization // inferred from sequence or structural similarity /// 0035844 // cloaca development // inferred from sequence or structural similarity /// 0035845 // photoreceptor cell outer segment organization // inferred from sequence or structural similarity /// 0039008 // pronephric nephron tubule morphogenesis // inferred from sequence or structural similarity /// 0039023 // pronephric duct morphogenesis // inferred from sequence or structural similarity /// 0042384 // cilium assembly // inferred from sequence or structural similarity /// 0043066 // negative regulation of apoptotic process // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0050795 // regulation of behavior // inferred from sequence or structural similarity /// 0060271 // cilium morphogenesis // inferred from sequence or structural similarity /// 0060271 // cilium morphogenesis // inferred from electronic annotation /// 0065001 // specification of axis polarity // inferred from sequence or structural similarity /// 0070121 // Kupffer's vesicle development // inferred from sequence or structural similarity /// 0070986 // left/right axis specification // inferred from sequence or structural similarity /// 0071599 // otic vesicle development // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005814 // centriole // inferred from sequence or structural similarity /// 0005814 // centriole // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0005912 // adherens junction // inferred from direct assay /// 0005912 // adherens junction // inferred from electronic annotation /// 0005929 // cilium // inferred from sequence or structural similarity /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from direct assay /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031513 // nonmotile primary cilium // inferred from sequence or structural similarity /// 0031513 // nonmotile primary cilium // inferred from electronic annotation /// 0036038 // TCTN-B9D complex // inferred from sequence or structural similarity /// 0042995 // cell projection // inferred from electronic annotation /// 0072372 // primary cilium // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr6:135708922-135818903 (-) // 96.46 // q23.3"]
["11732983_a_at",-0.09972429,-0.0021848679,0.108422756,0.002184391,-0.04750824,0.056982994,0.99291223,0.9808809,-1.0011896,-0.0017151949,1.0011896,"down","TMEM8B",51754,"0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from mutant phenotype /// 0007346 // regulation of mitotic cell cycle // traceable author statement /// 0040008 // regulation of growth // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr9:35829221-35847231 (+) // 92.96 // p13.3"]
["11757958_s_at",-0.048661232,0.014113426,0.07005215,-0.052474022,-0.0017204285,0.0017204285,0.763723,0.48871845,1.0205353,0.029326156,1.0205353,"up","POGZ",23126,"0007049 // cell cycle // inferred from electronic annotation /// 0007064 // mitotic sister chromatid cohesion // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation /// 0051382 // kinetochore assembly // inferred from mutant phenotype","0000790 // nuclear chromatin // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:151375199-151375546 (-) // 98.86 // q21.3"]
["11760936_at",0.012373209,-0.364738,-0.012373209,-0.2811861,0.035303593,0.1270523,0.8627612,0.6613426,-1.0584618,-0.08196918,1.0584618,"down","CMTM5",116173,"0006935 // chemotaxis // inferred from electronic annotation","0005615 // extracellular space // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation","chr14:23846251-23848607 (+) // 96.17 // q11.2"]
["11721451_a_at",0.09039688,0.029569626,-0.029569626,0.18688011,-0.11896324,-0.27063847,0.7844666,0.5206791,1.0700707,0.09770618,1.0700707,"up","ETF1",2107,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006415 // translational termination // traceable author statement /// 0006415 // translational termination // inferred from electronic annotation /// 0006449 // regulation of translational termination // traceable author statement /// 0006479 // protein methylation // inferred from direct assay /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement","0003723 // RNA binding // traceable author statement /// 0003747 // translation release factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008079 // translation termination factor activity // traceable author statement /// 0016149 // translation release factor activity, codon specific // inferred from electronic annotation /// 0043022 // ribosome binding // traceable author statement","chr5:137841783-137878989 (-) // 97.35 // q31.2"]
["11753864_x_at",-0.1578064,0.08582163,-0.006890297,-0.14793634,0.006890297,0.09349537,0.97253245,0.9219714,-1.0072638,-0.010441542,1.0072638,"down","PAX5",5079,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0002329 // pre-B cell differentiation // inferred from electronic annotation /// 0002639 // positive regulation of immunoglobulin production // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006959 // humoral immune response // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0009887 // organ morphogenesis // traceable author statement /// 0021517 // ventral spinal cord development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0033152 // immunoglobulin V(D)J recombination // inferred from electronic annotation /// 0045214 // sarcomere organization // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048745 // smooth muscle tissue development // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0051573 // negative regulation of histone H3-K9 methylation // inferred from electronic annotation /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0060043 // regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0072358 // cardiovascular system development // inferred from electronic annotation /// 2000727 // positive regulation of cardiac muscle cell differentiation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr9:37002658-37026572 (-) // 100.0 // p13.2"]
["11761545_x_at",0.037911892,0.42617917,0.24668455,-0.06889415,-0.037911654,-0.23275018,0.26083153,0.051516805,1.2746583,0.35011056,1.2746583,"up","FAM216A",29902,"","","","chr12:110906223-110925103 (+) // 63.1 // q24.11"]
["11716544_at",-0.2039113,0.20267773,-0.07655382,-0.06264067,0.06264067,0.30695915,0.7530345,0.472467,-1.0929662,-0.12824878,1.0929662,"down","TNNI1",7135,"0006937 // regulation of muscle contraction // inferred from electronic annotation /// 0006942 // regulation of striated muscle contraction // non-traceable author statement /// 0030049 // muscle filament sliding // traceable author statement /// 0055010 // ventricular cardiac muscle tissue morphogenesis // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0005861 // troponin complex // non-traceable author statement /// 0005861 // troponin complex // inferred from electronic annotation","0003779 // actin binding // non-traceable author statement /// 0003779 // actin binding // inferred from electronic annotation /// 0005523 // tropomyosin binding // non-traceable author statement","chr1:201372433-201391295 (-) // 74.1 // q32.1"]
["11741617_a_at",-0.11175394,0.17015743,-0.13937044,-0.09005284,0.09005284,0.09090161,0.8553208,0.64663625,-1.0405091,-0.05728959,1.0405091,"down","GPRIN3",285513,"","","","chr4:90165428-90229370 (-) // 99.1 // q22.1"]
["11750263_x_at",-0.16330004,0.05357361,-0.033463955,0.112093925,-0.031769276,0.031769753,0.6403028,0.3228412,-1.0607575,-0.0850949,1.0607575,"down","ZNF786",136051,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:148766732-148787810 (-) // 80.64 // q36.1"]
["11761443_a_at",-0.057967663,-0.10434103,-0.04007721,0.10434151,0.04007721,0.055360794,0.10468728,0.007929223,-1.0973738,-0.1340551,1.0973738,"down","KALRN",8997,"0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007399 // nervous system development // inferred from sequence or structural similarity /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0016192 // vesicle-mediated transport // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from sequence or structural similarity /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from sequence or structural similarity /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:124355943-124393805 (+) // 99.38 // q21.2"]
["11729751_a_at",-0.003625393,0.06344032,-0.03156662,-0.21107197,0.003625393,0.21006823,0.98238844,0.94871706,1.0059385,0.008542148,1.0059385,"up","LPAR1",1902,"0000187 // activation of MAPK activity // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007204 // elevation of cytosolic calcium ion concentration // traceable author statement /// 0010942 // positive regulation of cell death // inferred from electronic annotation /// 0010977 // negative regulation of neuron projection development // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from electronic annotation /// 0032060 // bleb assembly // inferred from electronic annotation /// 0035025 // positive regulation of Rho protein signal transduction // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0051482 // elevation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway // inferred from electronic annotation /// 0060999 // positive regulation of dendritic spine development // inferred from electronic annotation /// 0071453 // cellular response to oxygen levels // inferred from electronic annotation /// 0071673 // positive regulation of smooth muscle cell chemotaxis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from direct assay /// 0043197 // dendritic spine // inferred from electronic annotation /// 0043198 // dendritic shaft // inferred from electronic annotation","0001965 // G-protein alpha-subunit binding // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from electronic annotation /// 0070915 // lysophosphatidic acid receptor activity // inferred from electronic annotation","chr9:113635541-113800441 (-) // 85.81 // q31.3"]
["11751133_a_at",0.13980675,0.22148037,0.2117157,-0.13980675,-0.16960144,-0.15530205,0.023688652,0.00021869353,1.2709475,0.34590438,1.2709475,"up","ATP6V1B2",526,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // traceable author statement /// 0015992 // proton transport // inferred from electronic annotation /// 0033572 // transferrin transport // traceable author statement /// 0046034 // ATP metabolic process // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005902 // microvillus // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016469 // proton-transporting two-sector ATPase complex // inferred from electronic annotation /// 0033178 // proton-transporting two-sector ATPase complex, catalytic domain // inferred from electronic annotation /// 0033180 // proton-transporting V-type ATPase, V1 domain // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005524 // ATP binding // inferred from electronic annotation /// 0015078 // hydrogen ion transmembrane transporter activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism // inferred from electronic annotation /// 0046961 // proton-transporting ATPase activity, rotational mechanism // inferred from electronic annotation /// 0046961 // proton-transporting ATPase activity, rotational mechanism // traceable author statement","chr8:20054905-20078289 (+) // 99.87 // p21.3"]
["11760779_a_at",0.0045166016,0.014091492,-0.04131174,-0.07817602,-0.0045166016,0.048872948,0.9760473,0.93167984,1.0025717,0.0037054191,1.0025717,"up","MMP19",4327,"0001525 // angiogenesis // inferred from electronic annotation /// 0001541 // ovarian follicle development // inferred from electronic annotation /// 0001542 // ovulation from ovarian follicle // inferred from electronic annotation /// 0001554 // luteolysis // inferred from electronic annotation /// 0006508 // proteolysis // non-traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030574 // collagen catabolic process // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:56231912-56236724 (-) // 99.91 // q13.2"]
["11719155_a_at",0.0008382797,-0.0008382797,-0.049824715,0.13467503,0.051916122,-0.020141602,0.51811916,0.20533471,-1.0512395,-0.07209138,1.0512395,"down","DRAM1",55332,"0006914 // autophagy // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:102271104-102317401 (+) // 85.76 // q23.2"]
["11759350_at",0.1289351,-0.15377593,-0.04606557,-0.037560225,0.1345439,0.037559986,0.78209233,0.51614034,-1.0486138,-0.06848342,1.0486138,"down","METTL20",254013,"0006479 // protein methylation // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0008168 // methyltransferase activity // inferred from electronic annotation /// 0008276 // protein methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr12:31812608-31826879 (+) // 51.89 // p11.21"]
["11739217_a_at",-0.07458305,-0.15196013,0.07458305,-0.23021197,0.1523385,0.18503141,0.8268591,0.5931145,-1.0616975,-0.08637275,1.0616975,"down","RSAD2",91543,"0001503 // ossification // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009615 // response to virus // inferred from direct assay /// 0009615 // response to virus // inferred from electronic annotation /// 0030278 // regulation of ossification // inferred from electronic annotation /// 0034157 // positive regulation of toll-like receptor 7 signaling pathway // inferred from sequence or structural similarity /// 0034165 // positive regulation of toll-like receptor 9 signaling pathway // inferred from sequence or structural similarity /// 0035710 // CD4-positive, alpha-beta T cell activation // inferred from sequence or structural similarity /// 0043367 // CD4-positive, alpha-beta T cell differentiation // inferred from sequence or structural similarity /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045071 // negative regulation of viral genome replication // inferred from direct assay /// 0050709 // negative regulation of protein secretion // inferred from direct assay /// 0051607 // defense response to virus // inferred from direct assay /// 0051607 // defense response to virus // inferred from electronic annotation /// 2000553 // positive regulation of T-helper 2 cell cytokine production // inferred from sequence or structural similarity","0005739 // mitochondrion // inferred from direct assay /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005811 // lipid particle // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043621 // protein self-association // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from direct assay","chr2:7017774-7038937 (+) // 87.81 // p25.2"]
["11718370_a_at",-0.089028835,-0.06769943,-0.020169735,0.2651415,0.09414005,0.020169735,0.30265316,0.06958761,-1.1371714,-0.1854497,1.1371714,"down","NRBF2",29982,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr10:64893006-64914786 (+) // 96.84 // q21.3"]
["11749759_a_at",-0.015996933,0.06726885,0.015996695,-0.2978742,0.26187325,-0.13763523,0.86112803,0.6579637,1.057239,0.08030163,1.057239,"up","SCN3A",6328,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // non-traceable author statement /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0035725 // sodium ion transmembrane transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0001518 // voltage-gated sodium channel complex // non-traceable author statement /// 0001518 // voltage-gated sodium channel complex // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005248 // voltage-gated sodium channel activity // non-traceable author statement /// 0005248 // voltage-gated sodium channel activity // inferred from electronic annotation /// 0005272 // sodium channel activity // inferred from electronic annotation","chr2:165946480-165950338 (-) // 94.65 // q24.3"]
["11722249_s_at",0.12646866,-0.13700628,-0.100506306,-0.13338375,0.100506306,0.13320827,0.82008517,0.5814944,-1.0500501,-0.07045822,1.0500501,"down","C10orf11",83938,"","","","chr10:77542518-78317130 (+) // 96.03 // q22.2"]
["11733758_a_at",0.06719351,-0.07463646,-0.0051784515,0.0051784515,-0.0092458725,0.14719677,0.7490365,0.46639067,-1.0366414,-0.05191686,1.0366414,"down","ZNF446",55663,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:58987751-58992593 (+) // 98.19 // q13.43"]
["11721725_at",0.05116129,-0.07398367,-0.08128357,0.26331902,0.010343075,-0.010343075,0.59891534,0.27916646,-1.0886008,-0.12247494,1.0886008,"down","PSKH1",5681,"0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // non-traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr16:67927164-67963581 (+) // 96.04 // q22.1"]
["11739969_a_at",-0.01713276,-0.0574646,0.07508278,0.01713276,-0.03272724,0.044060707,0.94484824,0.84666204,-1.0064859,-0.009327018,1.0064859,"down","MIER1",57708,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype /// 0031937 // positive regulation of chromatin silencing // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction","chr1:67395925-67454302 (+) // 97.07 // p31.3"]
["11764016_a_at",0.180789,-0.44578743,0.08483648,0.04534912,-0.20226002,-0.04534912,0.9910751,0.9734258,1.0051188,0.007366098,1.0051188,"up","TRAPPC2L",51693,"0006810 // transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","","chr16:88928480-88929086 (+) // 52.33 // q24.3"]
["11729417_at",-0.056125164,-0.23844433,0.3051641,-0.0805347,0.056125164,0.3051641,0.8662468,0.6691645,-1.0644095,-0.09005328,1.0644095,"down","KRT24",192666,"","0005737 // cytoplasm // inferred from direct assay /// 0005882 // intermediate filament // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0005198 // structural molecule activity // inferred from electronic annotation","chr17:38854244-38860004 (-) // 99.05 // q21.2"]
["11744054_a_at",-0.14982653,-0.28792858,-0.38410378,0.22602177,0.27577305,0.14982653,0.06813885,0.0031328243,-1.4055747,-0.4911601,1.4055747,"down","ZNFX1",57169,"","","0046872 // metal ion binding // inferred from electronic annotation","chr20:47862433-47894963 (-) // 94.87 // q13.13"]
["11761367_x_at",-0.0036830902,0.0036830902,0.11558437,-0.13034153,-0.06312895,0.11771488,0.76327574,0.48762408,1.0452007,0.06378,1.0452007,"up","PKD2L2",27039,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation","chr5:137225154-137278432 (+) // 87.6 // q31.2"]
["11735553_a_at",0.12197256,0.13570738,-0.09536886,0.09536886,-0.17352581,-0.39211845,0.5766917,0.256969,1.1573796,0.21086214,1.1573796,"up","C16orf93",90835,"","","","chr16:30768752-30773542 (-) // 98.81 // p11.2"]
["11724660_a_at",-0.020751953,0.031368732,0.2345376,-0.21429586,0.020751953,-0.042189598,0.51330405,0.20114411,1.1175164,0.160296,1.1175164,"up","PAX8",7849,"0001655 // urogenital system development // inferred from sequence or structural similarity /// 0001655 // urogenital system development // inferred from electronic annotation /// 0001656 // metanephros development // inferred from electronic annotation /// 0001658 // branching involved in ureteric bud morphogenesis // inferred from expression pattern /// 0001822 // kidney development // inferred from expression pattern /// 0001823 // mesonephros development // inferred from sequence or structural similarity /// 0001823 // mesonephros development // inferred from electronic annotation /// 0003337 // mesenchymal to epithelial transition involved in metanephros morphogenesis // inferred from expression pattern /// 0006351 // transcription, DNA-dependent // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from expression pattern /// 0007417 // central nervous system development // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030878 // thyroid gland development // inferred from expression pattern /// 0030878 // thyroid gland development // inferred from mutant phenotype /// 0030878 // thyroid gland development // inferred from electronic annotation /// 0039003 // pronephric field specification // inferred from sequence or structural similarity /// 0039003 // pronephric field specification // inferred from electronic annotation /// 0042472 // inner ear morphogenesis // inferred from sequence or structural similarity /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from sequence or structural similarity /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048793 // pronephros development // inferred from sequence or structural similarity /// 0048793 // pronephros development // inferred from electronic annotation /// 0071371 // cellular response to gonadotropin stimulus // inferred from direct assay /// 0071599 // otic vesicle development // inferred from expression pattern /// 0072050 // S-shaped body morphogenesis // inferred from electronic annotation /// 0072073 // kidney epithelium development // inferred from electronic annotation /// 0072108 // positive regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis // inferred from sequence or structural similarity /// 0072108 // positive regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis // inferred from electronic annotation /// 0072164 // mesonephric tubule development // inferred from electronic annotation /// 0072205 // metanephric collecting duct development // inferred from electronic annotation /// 0072207 // metanephric epithelium development // inferred from expression pattern /// 0072221 // metanephric distal convoluted tubule development // inferred from sequence or structural similarity /// 0072221 // metanephric distal convoluted tubule development // inferred from electronic annotation /// 0072278 // metanephric comma-shaped body morphogenesis // inferred from expression pattern /// 0072284 // metanephric S-shaped body morphogenesis // inferred from expression pattern /// 0072289 // metanephric nephron tubule formation // inferred from sequence or structural similarity /// 0072289 // metanephric nephron tubule formation // inferred from electronic annotation /// 0072305 // negative regulation of mesenchymal stem cell apoptotic process involved in metanephric nephron morphogenesis // inferred from sequence or structural similarity /// 0072305 // negative regulation of mesenchymal stem cell apoptotic process involved in metanephric nephron morphogenesis // inferred from electronic annotation /// 0072307 // regulation of metanephric nephron tubule epithelial cell differentiation // inferred from sequence or structural similarity /// 0072307 // regulation of metanephric nephron tubule epithelial cell differentiation // inferred from electronic annotation /// 0090190 // positive regulation of branching involved in ureteric bud morphogenesis // inferred from sequence or structural similarity /// 0090190 // positive regulation of branching involved in ureteric bud morphogenesis // inferred from electronic annotation /// 1900212 // negative regulation of mesenchymal cell apoptotic process involved in metanephros development // inferred from sequence or structural similarity /// 1900215 // negative regulation of apoptotic process involved in metanephric collecting duct development // inferred from sequence or structural similarity /// 1900218 // negative regulation of apoptotic process involved in metanephric nephron tubule development // inferred from sequence or structural similarity /// 2000594 // positive regulation of metanephric DCT cell differentiation // inferred from sequence or structural similarity /// 2000594 // positive regulation of metanephric DCT cell differentiation // inferred from electronic annotation /// 2000611 // positive regulation of thyroid hormone generation // inferred from mutant phenotype /// 2000611 // positive regulation of thyroid hormone generation // inferred from electronic annotation /// 2000612 // regulation of thyroid-stimulating hormone secretion // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from sequence or structural similarity /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from mutant phenotype /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0004996 // thyroid-stimulating hormone receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation","chr2:113972093-114036527 (-) // 91.34 // q13"]
["11753748_x_at",-0.035571575,0.0696578,0.035571575,-0.38673973,-0.3121481,0.08901787,0.5212328,0.20785998,1.1700006,0.22650921,1.1700006,"up","MED16",10025,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // non-traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0030518 // intracellular steroid hormone receptor signaling pathway // inferred from direct assay /// 0030521 // androgen receptor signaling pathway // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016592 // mediator complex // inferred from direct assay /// 0016592 // mediator complex // inferred from electronic annotation","0003712 // transcription cofactor activity // inferred from direct assay /// 0003713 // transcription coactivator activity // traceable author statement /// 0004872 // receptor activity // inferred from direct assay /// 0030375 // thyroid hormone receptor coactivator activity // inferred from direct assay /// 0042809 // vitamin D receptor binding // non-traceable author statement /// 0046966 // thyroid hormone receptor binding // inferred from direct assay","chr19:867971-891148 (-) // 100.0 // p13.3"]
["11732847_at",-0.20833826,-0.067950726,0.0823617,-0.14775085,0.07475424,0.067950726,0.8317065,0.601765,-1.0446072,-0.0629605,1.0446072,"down","CABP7",164633,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032588 // trans-Golgi network membrane // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr22:30116343-30127826 (+) // 84.66 // q12.2"]
["11716236_s_at",0.0131492615,0.04888153,-0.019195557,-0.18567467,0.047822,-0.0131492615,0.7191797,0.42396283,1.0458039,0.06461236,1.0458039,"up","RAE1",8480,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008645 // hexose transport // traceable author statement /// 0010827 // regulation of glucose transport // traceable author statement /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005640 // nuclear outer membrane // traceable author statement /// 0005643 // nuclear pore // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005856 // cytoskeleton // traceable author statement","0003723 // RNA binding // traceable author statement /// 0008017 // microtubule binding // inferred from sequence or structural similarity","chr20:55926585-55953796 (+) // 95.85 // q13.31"]
["11731368_at",-0.05697775,0.07204819,-0.054157734,-0.00015306473,0.021736622,0.00015306473,0.8634598,0.66298795,-1.0141525,-0.020274647,1.0141525,"down","ZNF442",79973,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:12460183-12476475 (-) // 77.08 // p13.2"]
["11722373_a_at",0.23578405,0.013998985,-0.013999462,0.20253468,-0.029696941,-0.072886944,0.88936645,0.7171828,1.0318817,0.04527757,1.0318817,"up","GGA2",23062,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // non-traceable author statement /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005622 // intracellular // non-traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030131 // clathrin adaptor complex // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from direct assay /// 0044431 // Golgi apparatus part // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0030306 // ADP-ribosylation factor binding // inferred from direct assay","chr16:23474936-23521835 (-) // 83.87 // p12.2"]
["11755648_a_at",-0.105899334,-0.03224039,0.004591465,0.053822517,-0.004591465,0.012983799,0.44638863,0.15089183,-1.0462694,-0.0652544,1.0462694,"down","MICAL2",9645,"0008152 // metabolic process // inferred from electronic annotation /// 0030042 // actin filament depolymerization // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0003779 // actin binding // inferred from sequence or structural similarity /// 0003779 // actin binding // inferred from electronic annotation /// 0004497 // monooxygenase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016709 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0071949 // FAD binding // inferred from sequence or structural similarity","chr11:12274078-12285334 (+) // 59.68 // p15.3"]
["11746423_a_at",0.15101433,-0.010608673,0.010608673,0.07185936,-0.15030575,-0.15072441,0.5486095,0.23105879,1.091815,0.12672842,1.091815,"up","RNFT1",51136,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:58030263-58042122 (-) // 96.41 // q23.1"]
["11762184_at",-0.079226494,0.117558956,-0.15143108,-0.15226841,0.079226494,0.15890312,0.8401474,0.61882746,-1.0470425,-0.06631999,1.0470425,"down","SLC25A42",284439,"0006810 // transport // inferred from electronic annotation /// 0015866 // ADP transport // inferred from direct assay /// 0015867 // ATP transport // inferred from direct assay /// 0035349 // coenzyme A transmembrane transport // inferred from direct assay /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0080121 // AMP transport // inferred from direct assay","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005347 // ATP transmembrane transporter activity // inferred from direct assay /// 0015217 // ADP transmembrane transporter activity // inferred from direct assay /// 0015228 // coenzyme A transmembrane transporter activity // inferred from direct assay /// 0043262 // adenosine-diphosphatase activity // inferred from direct assay /// 0080122 // AMP transmembrane transporter activity // inferred from direct assay","chr19:19206751-19217743 (+) // 76.22 // p13.11"]
["11744248_a_at",-0.027745724,0.007750988,-0.075342655,0.007869244,-0.007750988,0.16204405,0.5374417,0.22126406,-1.0613005,-0.08583322,1.0613005,"down","LRRC4C",57689,"0050770 // regulation of axonogenesis // inferred from direct assay","0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr11:40135752-40315691 (-) // 94.38 // p12"]
["11721718_a_at",0.20617199,0.025264263,-0.025264263,0.067438126,-0.2159276,-0.14453459,0.5186358,0.20604736,1.1222535,0.16639864,1.1222535,"up","ATRX",546,"0006281 // DNA repair // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006306 // DNA methylation // traceable author statement /// 0006310 // DNA recombination // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // traceable author statement","0000228 // nuclear chromosome // inferred from electronic annotation /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005720 // nuclear heterochromatin // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003678 // DNA helicase activity // traceable author statement /// 0003682 // chromatin binding // inferred from electronic annotation /// 0004386 // helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070087 // chromo shadow domain binding // inferred from physical interaction","chrX:76760357-77041755 (-) // 97.35 // q21.1"]
["11758201_s_at",-0.3307171,-0.34739304,-0.20073032,0.20073032,0.48177147,0.3550005,0.060326383,0.0024059718,-1.5570129,-0.6387809,1.5570129,"down","IMPAD1",54928,"0001501 // skeletal system development // inferred from electronic annotation /// 0001958 // endochondral ossification // inferred from electronic annotation /// 0002063 // chondrocyte development // inferred from electronic annotation /// 0006021 // inositol biosynthetic process // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0030204 // chondroitin sulfate metabolic process // inferred from electronic annotation /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation","0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008254 // 3'-nucleotidase activity // inferred from electronic annotation /// 0008441 // 3'(2'),5'-bisphosphate nucleotidase activity // inferred from electronic annotation /// 0008934 // inositol monophosphate 1-phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0052832 // inositol monophosphate 3-phosphatase activity // inferred from electronic annotation /// 0052833 // inositol monophosphate 4-phosphatase activity // inferred from electronic annotation /// 0052834 // inositol monophosphate phosphatase activity // inferred from electronic annotation","chr8:57870489-57871203 (-) // 70.28 // q12.1"]
["11763943_at",-0.16685581,-0.03860426,0.004990101,0.27337217,0.3666892,-0.004990101,0.33794844,0.08622474,-1.2129446,-0.2785137,1.2129446,"down","MT1DP",326343,"","","0046872 // metal ion binding // inferred from electronic annotation","chr16:56677597-56679161 (+) // 89.9 // q12.2"]
["11717792_a_at",0.17410564,-0.0034837723,-0.13225174,-0.14312649,0.028981209,0.0034837723,0.8607832,0.6570568,1.0350333,0.049677245,1.0350333,"up","FAM219A",203259,"","","","chr9:34398026-34458568 (-) // 87.17 // p13.3"]
["11761565_x_at",0.30434322,0.11902714,0.06711483,-0.06711531,-0.11335468,-0.25799608,0.1928121,0.028285699,1.2394073,0.30965036,1.2394073,"up","CEP70",80321,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr3:138251355-138313382 (-) // 82.69 // q22.3"]
["11763255_x_at",-0.25394917,-0.38699007,0.1679616,0.0098900795,-0.0098900795,0.012711525,0.69341844,0.38832554,-1.1187568,-0.16189641,1.1187568,"down","IGLJ3",28831,"","","","chr22:23063353-23264812 (+) // 84.66 // q11.22"]
["11727076_x_at",-0.06685114,0.15713453,-0.04624176,-0.048531532,0.04624176,0.3223176,0.78696716,0.5248819,-1.0658433,-0.09199541,1.0658433,"down","PLAC4",191585,"","0019028 // viral capsid // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation","chr21:42547158-42551989 (-) // 27.4 // q22.2"]
["11758873_a_at",-0.39832783,-0.08881235,-0.45041132,0.08881235,0.24175406,0.15969801,0.15046896,0.017148493,-1.3908228,-0.4759386,1.3908228,"down","HPSE",10855,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006029 // proteoglycan metabolic process // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from direct assay /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from direct assay /// 0030194 // positive regulation of blood coagulation // inferred from direct assay /// 0030200 // heparan sulfate proteoglycan catabolic process // inferred from direct assay /// 0033690 // positive regulation of osteoblast proliferation // inferred from direct assay /// 0033690 // positive regulation of osteoblast proliferation // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation /// 0051797 // regulation of hair follicle development // inferred from direct assay /// 0051798 // positive regulation of hair follicle development // inferred from electronic annotation /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from direct assay /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0060055 // angiogenesis involved in wound healing // inferred from electronic annotation /// 0061042 // vascular wound healing // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004566 // beta-glucuronidase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0030305 // heparanase activity // inferred from direct assay /// 0043169 // cation binding // inferred from electronic annotation /// 0045545 // syndecan binding // inferred from direct assay /// 0046983 // protein dimerization activity // inferred from direct assay","chr4:84213613-84256306 (-) // 72.12 // q21.23"]
["11731483_a_at",-0.50048184,-0.014405251,0.014405251,-0.01465106,0.014405251,0.32632804,0.5582439,0.23945887,-1.2104315,-0.27552137,1.2104315,"down","CNRIP1",25927,"","","","chr2:68520148-68547193 (-) // 97.66 // p14"]
["11722822_a_at",-0.017858744,-0.2288537,0.017858982,0.11086631,0.021281242,-0.087099075,0.69881773,0.39509326,-1.0653301,-0.09130059,1.0653301,"down","SKP1",6500,"0000080 // G1 phase of mitotic cell cycle // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0007219 // Notch signaling pathway // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0031146 // SCF-dependent proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0031146 // SCF-dependent proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0035518 // histone H2A monoubiquitination // inferred from direct assay /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement","0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0019005 // SCF ubiquitin ligase complex // inferred from direct assay /// 0019005 // SCF ubiquitin ligase complex // inferred from electronic annotation /// 0031519 // PcG protein complex // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr5:133492081-133512724 (-) // 98.94 // q31.1"]
["11747218_a_at",-0.24708033,0.13913918,0.22962952,-0.18996143,-0.13913918,0.23483133,0.8976441,0.7349069,1.0511626,0.07198585,1.0511626,"up","LOC442028",442028,"","","","chr2:95533230-95601120 (-) // 91.97 // q11.1"]
["11762671_at",0.023980618,-0.023980618,0.0992198,-0.0315125,-0.109532356,0.080848694,0.74778634,0.4650521,1.0375197,0.05313872,1.0375197,"up","C2",717,"0006508 // proteolysis // inferred from electronic annotation /// 0006956 // complement activation // traceable author statement /// 0006956 // complement activation // inferred from electronic annotation /// 0006958 // complement activation, classical pathway // inferred from electronic annotation /// 0006958 // complement activation, classical pathway // traceable author statement /// 0030449 // regulation of complement activation // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr6:31895479-31902785 (+) // 65.35 // p21.33"]
["11741085_a_at",0.0960207,-0.05768776,-0.11759472,0.014592171,-0.012338638,0.012338638,0.8576919,0.65153843,-1.0219216,-0.031284567,1.0219216,"down","APLP2",334,"0001967 // suckling behavior // inferred from electronic annotation /// 0006878 // cellular copper ion homeostasis // inferred from electronic annotation /// 0007176 // regulation of epidermal growth factor-activated receptor activity // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // non-traceable author statement /// 0007617 // mating behavior // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0030901 // midbrain development // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0046914 // transition metal ion binding // inferred from electronic annotation","chr11:129939715-130014705 (+) // 96.28 // q24.3"]
["11753363_x_at",0.08966923,0.07310104,-0.08306265,-0.035713196,-0.14158869,0.035713196,0.6894917,0.3831254,1.0524601,0.0737655,1.0524601,"up","ZSCAN2",54993,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:85147131-85166867 (+) // 87.88 // q25.2"]
["11754717_a_at",0.008333206,0.08474541,0.051408768,-0.060850143,-0.008333206,-0.06535339,0.20424603,0.031682014,1.0665917,0.09300806,1.0665917,"up","TPP2",7174,"0000209 // protein polyubiquitination // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0006508 // proteolysis // not recorded /// 0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // traceable author statement","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004175 // endopeptidase activity // traceable author statement /// 0004177 // aminopeptidase activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // not recorded /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0008240 // tripeptidyl-peptidase activity // inferred from electronic annotation /// 0008240 // tripeptidyl-peptidase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation","chr13:103309296-103330809 (+) // 65.15 // q33.1"]
["11744028_a_at",-0.08069229,0.013877869,-0.013877869,0.04010105,0.10433483,-0.12955236,0.8785242,0.6936064,-1.0223284,-0.03185867,1.0223284,"down","SLC35A1",10559,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006464 // cellular protein modification process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0015780 // nucleotide-sugar transport // inferred from electronic annotation /// 0015782 // CMP-N-acetylneuraminate transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0000139 // Golgi membrane // traceable author statement /// 0005794 // Golgi apparatus // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005338 // nucleotide-sugar transmembrane transporter activity // inferred from electronic annotation /// 0005351 // sugar:hydrogen symporter activity // inferred from electronic annotation /// 0005456 // CMP-N-acetylneuraminate transmembrane transporter activity // traceable author statement","chr6:88182636-88222057 (+) // 98.35 // q15"]
["11729834_at",-0.09613705,-0.009699345,-0.106199265,0.009699345,0.08196926,0.21133232,0.28403863,0.06111474,-1.1263685,-0.17167892,1.1263685,"down","EIF5A2",56648,"0006412 // translation // inferred from electronic annotation /// 0006414 // translational elongation // inferred from electronic annotation /// 0006452 // translational frameshifting // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007283 // spermatogenesis // non-traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008612 // peptidyl-lysine modification to hypusine // traceable author statement /// 0008612 // peptidyl-lysine modification to hypusine // inferred from electronic annotation /// 0010509 // polyamine homeostasis // non-traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045901 // positive regulation of translational elongation // inferred from electronic annotation /// 0045905 // positive regulation of translational termination // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043022 // ribosome binding // inferred from electronic annotation","chr3:170606203-170626477 (-) // 84.51 // q26.2"]
["11724315_a_at",-0.13791347,-0.09767413,0.075500965,0.008692265,-0.008692265,0.05372286,0.6667327,0.35413066,-1.0506411,-0.07126987,1.0506411,"down","LUZP1",7798,"","0005634 // nucleus // inferred from electronic annotation","","chr1:23410028-23495351 (-) // 91.43 // p36.12"]
["11761382_x_at",0.05820036,0.29350615,-0.14849567,-0.06174326,0.02987194,-0.02987194,0.7932791,0.53560257,1.06313,0.08831805,1.06313,"up","SORBS2",8470,"","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0030018 // Z disc // non-traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005200 // structural constituent of cytoskeleton // traceable author statement /// 0008093 // cytoskeletal adaptor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008307 // structural constituent of muscle // traceable author statement","chr4:186547819-186877488 (-) // 99.81 // q35.1"]
["11739567_s_at",0.1065979,0.15979767,0.19590569,-0.1065979,-0.22915936,-0.14632702,0.056566875,0.0020991412,1.2438351,0.31479523,1.2438351,"up","FKBP5",2289,"0000413 // protein peptidyl-prolyl isomerization // not recorded /// 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006457 // protein folding // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0018208 // peptidyl-proline modification // not recorded","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // not recorded","0003755 // peptidyl-prolyl cis-trans isomerase activity // not recorded /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0005528 // FK506 binding // not recorded /// 0005528 // FK506 binding // traceable author statement /// 0016853 // isomerase activity // inferred from electronic annotation /// 0031072 // heat shock protein binding // inferred from physical interaction","chr6:35541432-35610623 (-) // 87.87 // p21.31"]
["11719928_a_at",0.17499828,0.108688354,-0.029086113,0.029086113,-0.32164192,-0.4363289,0.35944164,0.097786754,1.2551227,0.32782835,1.2551227,"up","KDM5B",10765,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0034720 // histone H3-K4 demethylation // inferred from direct assay /// 0034720 // histone H3-K4 demethylation // inferred from electronic annotation /// 0034721 // histone H3-K4 demethylation, trimethyl-H3-K4-specific // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from electronic annotation /// 0032453 // histone demethylase activity (H3-K4 specific) // inferred from electronic annotation /// 0034647 // histone demethylase activity (H3-trimethyl-K4 specific) // inferred from direct assay /// 0034648 // histone demethylase activity (H3-dimethyl-K4 specific) // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:202696344-202778598 (-) // 90.96 // q32.1"]
["11747044_s_at",0.043725014,0.10602951,0.023388863,-0.053299904,-0.032159805,-0.023388863,0.1767019,0.023569703,1.0673233,0.09399728,1.0673233,"up","LOC653375 /// WBSCR16","653375 /// 81554","","0005739 // mitochondrion // inferred from electronic annotation","","chr7:74765844-74790085 (+) // 97.03 // q11.23 /// chr7:74456328-74480572 (-) // 97.31 // q11.23"]
["11760079_at",0.009725571,-0.03026104,-0.21737862,0.017944336,0.19972897,-0.009725809,0.50684476,0.19648892,-1.1085091,-0.14862056,1.1085091,"down","ABCA1",19,"0002790 // peptide secretion // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006497 // protein lipidation // inferred from electronic annotation /// 0006629 // lipid metabolic process // traceable author statement /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006820 // anion transport // inferred from sequence or structural similarity /// 0006820 // anion transport // inferred from electronic annotation /// 0006911 // phagocytosis, engulfment // inferred from electronic annotation /// 0007040 // lysosome organization // inferred from direct assay /// 0007186 // G-protein coupled receptor signaling pathway // inferred from mutant phenotype /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from direct assay /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0010745 // negative regulation of macrophage derived foam cell differentiation // traceable author statement /// 0010875 // positive regulation of cholesterol efflux // inferred from electronic annotation /// 0010887 // negative regulation of cholesterol storage // traceable author statement /// 0016197 // endosomal transport // inferred from direct assay /// 0030819 // positive regulation of cAMP biosynthetic process // inferred from mutant phenotype /// 0032367 // intracellular cholesterol transport // inferred from mutant phenotype /// 0032488 // Cdc42 protein signal transduction // inferred from mutant phenotype /// 0033344 // cholesterol efflux // inferred from direct assay /// 0033344 // cholesterol efflux // inferred from mutant phenotype /// 0033344 // cholesterol efflux // inferred from electronic annotation /// 0033700 // phospholipid efflux // inferred from direct assay /// 0033700 // phospholipid efflux // inferred from mutant phenotype /// 0033700 // phospholipid efflux // inferred from electronic annotation /// 0034380 // high-density lipoprotein particle assembly // inferred from mutant phenotype /// 0034616 // response to laminar fluid shear stress // inferred from expression pattern /// 0038027 // apolipoprotein A-I-mediated signaling pathway // inferred from direct assay /// 0042157 // lipoprotein metabolic process // traceable author statement /// 0042157 // lipoprotein metabolic process // inferred from electronic annotation /// 0042158 // lipoprotein biosynthetic process // inferred from electronic annotation /// 0042632 // cholesterol homeostasis // inferred from direct assay /// 0043691 // reverse cholesterol transport // inferred from mutant phenotype /// 0043691 // reverse cholesterol transport // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045332 // phospholipid translocation // inferred from electronic annotation /// 0050702 // interleukin-1 beta secretion // inferred from mutant phenotype /// 0055091 // phospholipid homeostasis // inferred from mutant phenotype /// 0055098 // response to low-density lipoprotein particle stimulus // inferred from expression pattern /// 0060155 // platelet dense granule organization // inferred from mutant phenotype /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation /// 0071300 // cellular response to retinoic acid // inferred from electronic annotation","0005622 // intracellular // inferred from mutant phenotype /// 0005624 // membrane fraction // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay /// 0045335 // phagocytic vesicle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred by curator /// 0005548 // phospholipid transporter activity // inferred from direct assay /// 0005548 // phospholipid transporter activity // inferred from electronic annotation /// 0008509 // anion transmembrane transporter activity // inferred from sequence or structural similarity /// 0008509 // anion transmembrane transporter activity // inferred from electronic annotation /// 0015485 // cholesterol binding // inferred by curator /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0017127 // cholesterol transporter activity // inferred from direct assay /// 0017127 // cholesterol transporter activity // inferred from electronic annotation /// 0019905 // syntaxin binding // inferred from physical interaction /// 0031267 // small GTPase binding // inferred from physical interaction /// 0034185 // apolipoprotein binding // inferred from physical interaction /// 0034186 // apolipoprotein A-I binding // inferred from physical interaction /// 0034188 // apolipoprotein A-I receptor activity // inferred from direct assay","chr9:107606051-107690426 (-) // 81.74 // q31.1"]
["11735036_a_at",-0.07909107,-0.048966885,0.08635998,-0.031381607,0.031381607,0.13550663,0.7375286,0.44870502,-1.0417926,-0.059068136,1.0417926,"down","SORCS1",114815,"0007218 // neuropeptide signaling pathway // non-traceable author statement","0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008188 // neuropeptide receptor activity // non-traceable author statement","chr10:108333420-108924326 (-) // 94.46 // q25.1"]
["11730971_a_at",-0.06961155,-0.007795334,0.007795334,-0.06606197,0.024184227,0.2319994,0.70005345,0.39694983,-1.0618484,-0.08657781,1.0618484,"down","CYP4F12",66002,"0000038 // very long-chain fatty acid metabolic process // inferred from sequence or structural similarity /// 0001676 // long-chain fatty acid metabolic process // inferred from sequence or structural similarity /// 0003091 // renal water homeostasis // inferred from sequence or structural similarity /// 0003095 // pressure natriuresis // inferred from sequence or structural similarity /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0017144 // drug metabolic process // inferred from sequence or structural similarity /// 0019369 // arachidonic acid metabolic process // inferred from sequence or structural similarity /// 0019373 // epoxygenase P450 pathway // inferred from sequence or structural similarity /// 0030195 // negative regulation of blood coagulation // inferred from sequence or structural similarity /// 0036101 // leukotriene B4 catabolic process // inferred from sequence or structural similarity /// 0042360 // vitamin E metabolic process // inferred from sequence or structural similarity /// 0042371 // vitamin K biosynthetic process // inferred from sequence or structural similarity /// 0044281 // small molecule metabolic process // traceable author statement /// 0055078 // sodium ion homeostasis // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from sequence or structural similarity /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from sequence or structural similarity","0004497 // monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0008392 // arachidonic acid epoxygenase activity // inferred from sequence or structural similarity /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0018685 // alkane 1-monooxygenase activity // inferred from sequence or structural similarity /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047057 // vitamin-K-epoxide reductase (warfarin-sensitive) activity // inferred from sequence or structural similarity /// 0050051 // leukotriene-B4 20-monooxygenase activity // inferred from sequence or structural similarity /// 0070330 // aromatase activity // inferred from electronic annotation","chr19:15783885-15807984 (+) // 98.06 // p13.12"]
["11722025_x_at",0.06832695,-0.14455271,-0.15153408,0.15963936,0.020414352,-0.020414352,0.54348004,0.2264531,-1.0936363,-0.129133,1.0936363,"down","ABCF2",10061,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005740 // mitochondrial envelope // traceable author statement /// 0043190 // ATP-binding cassette (ABC) transporter complex // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0005215 // transporter activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // traceable author statement /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr7:150909140-150924666 (-) // 81.12 // q36.1"]
["11732237_a_at",-0.22131228,0.13677359,0.015517235,-0.015517235,-0.07226133,0.037688017,0.98531336,0.95694107,-1.0043836,-0.006310325,1.0043836,"down","GYPA",2993,"0007016 // cytoskeletal anchoring at plasma membrane // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0047484 // regulation of response to osmotic stress // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr4:145030456-145061939 (-) // 81.82 // q31.21"]
["11727427_a_at",0.107189655,-0.02038145,0.020381927,0.15897942,-0.15987253,-0.08876085,0.8086019,0.56127614,1.0465307,0.06561466,1.0465307,"up","ACSM3",6296,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008217 // regulation of blood pressure // non-traceable author statement /// 0008217 // regulation of blood pressure // traceable author statement /// 0042632 // cholesterol homeostasis // non-traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0015645 // fatty acid ligase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047760 // butyrate-CoA ligase activity // inferred from electronic annotation","chr16:20775023-20808901 (+) // 99.37 // p12.3"]
["11726440_s_at",-0.052228928,-0.026983738,0.15563202,0.02039814,-0.02039814,0.0588274,0.9778594,0.93669164,1.0040729,0.0058640256,1.0040729,"up","MALT1",10892,"0001923 // B-1 B cell differentiation // inferred from electronic annotation /// 0002237 // response to molecule of bacterial origin // inferred from electronic annotation /// 0002726 // positive regulation of T cell cytokine production // inferred from mutant phenotype /// 0006508 // proteolysis // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0006916 // anti-apoptosis // non-traceable author statement /// 0006952 // defense response // non-traceable author statement /// 0007250 // activation of NF-kappaB-inducing kinase activity // inferred from mutant phenotype /// 0009620 // response to fungus // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0031398 // positive regulation of protein ubiquitination // non-traceable author statement /// 0032743 // positive regulation of interleukin-2 production // inferred from mutant phenotype /// 0042098 // T cell proliferation // inferred from electronic annotation /// 0042113 // B cell activation // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype /// 0045087 // innate immune response // inferred from electronic annotation /// 0050852 // T cell receptor signaling pathway // inferred from direct assay /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0050856 // regulation of T cell receptor signaling pathway // inferred from electronic annotation /// 0050870 // positive regulation of T cell activation // inferred by curator /// 0050870 // positive regulation of T cell activation // inferred from electronic annotation /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from electronic annotation /// 0051168 // nuclear export // inferred from direct assay /// 0051259 // protein oligomerization // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0032449 // CBM complex // non-traceable author statement /// 0043234 // protein complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0002020 // protease binding // inferred from electronic annotation /// 0004197 // cysteine-type endopeptidase activity // non-traceable author statement /// 0004197 // cysteine-type endopeptidase activity // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from direct assay /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019209 // kinase activator activity // inferred from mutant phenotype /// 0043621 // protein self-association // inferred from physical interaction","chr18:56338617-56417212 (+) // 68.09 // q21.32"]
["11737282_x_at",-0.04036665,0.06455946,0.04036665,-0.07769346,0.20294428,-0.07769346,0.98531336,0.9569984,1.003936,0.005667377,1.003936,"up","ZC3HAV1L",92092,"","","","chr7:138710177-138720775 (-) // 74.86 // q34"]
["11727854_s_at",-0.11735439,-0.037057877,0.037057877,-0.12317848,0.20423222,0.058389664,0.74422234,0.4594004,-1.0611284,-0.08559921,1.0611284,"down","NUP50",10762,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0010827 // regulation of glucose transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046907 // intracellular transport // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005643 // nuclear pore // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr22:45559725-45584055 (+) // 98.43 // q13.31"]
["11759858_at",-0.0062217712,0.036837578,-0.043708324,0.45879078,0.0062217712,-0.093898535,0.76957256,0.49695426,-1.09283,-0.12806891,1.09283,"down","CTAGE5",4253,"0043085 // positive regulation of catalytic activity // traceable author statement","","0008047 // enzyme activator activity // traceable author statement","chr14:39736449-39857948 (+) // 72.17 // q21.1"]
["11747296_a_at",0.20141602,-0.02715826,-0.025776386,0.025776386,0.05655718,-0.09482002,0.81843394,0.5787113,1.0378917,0.053655975,1.0378917,"up","ARMC8",25852,"","","","chr3:137906124-138015096 (+) // 97.89 // q22.3"]
["11715723_s_at",-0.27144814,-0.18968773,-0.18490124,0.29902554,0.31370163,0.18490124,0.034048837,0.000624728,-1.3959254,-0.48122185,1.3959254,"down","ITM2B",9445,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0042985 // negative regulation of amyloid precursor protein biosynthetic process // inferred from direct assay","0000139 // Golgi membrane // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030660 // Golgi-associated vesicle membrane // inferred from direct assay /// 0031301 // integral to organelle membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0001540 // beta-amyloid binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation","chr13:48807273-48836451 (+) // 86.85 // q14.2"]
["11721415_at",-0.026958466,0.026958942,-0.034661293,0.14786577,-0.08893967,0.13307285,0.69742495,0.39306355,-1.053765,-0.075553246,1.053765,"down","TMEM62",80021,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr15:43425719-43477344 (+) // 97.52 // q15.2"]
["11743796_a_at",0.23359966,0.03220558,0.08346939,-0.03220558,-0.1929512,-0.43104362,0.2873118,0.0623076,1.2615159,0.33515835,1.2615159,"up","APITD1 /// APITD1-CORT","100526739 /// 378708","0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0000712 // resolution of meiotic recombination intermediates // inferred from mutant phenotype /// 0006281 // DNA repair // inferred from direct assay /// 0006281 // DNA repair // inferred from electronic annotation /// 0006352 // transcription initiation, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from mutant phenotype /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0031297 // replication fork processing // inferred from mutant phenotype /// 0031398 // positive regulation of protein ubiquitination // traceable author statement /// 0051301 // cell division // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0043240 // Fanconi anaemia nuclear complex // inferred from direct assay /// 0071821 // FANCM-MHF complex // inferred from direct assay","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0003690 // double-stranded DNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr1:10490158-10512210 (+) // 94.29 // p36.22"]
["11748408_a_at",0.23561764,-0.008697033,0.00869751,0.022311687,-0.31632853,-0.3052969,0.38255453,0.11040216,1.2127739,0.27831063,1.2127739,"up","C1orf9",51430,"0001503 // ossification // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030867 // rough endoplasmic reticulum membrane // inferred from electronic annotation","","chr1:172502145-172572423 (+) // 96.15 // q24.3"]
["11749566_s_at",0.110461235,0.024652481,-0.024929523,-0.024652481,-0.092402935,0.047590256,0.6637552,0.34932506,1.0423813,0.059883088,1.0423813,"up","LCMT2",9836,"0008033 // tRNA processing // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation","","0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr15:43620438-43622780 (-) // 98.56 // q15.3"]
["11731251_at",-0.21905708,-0.008907795,-0.09115076,0.0458889,0.008907795,0.16304207,0.3255162,0.080174714,-1.132087,-0.17898482,1.132087,"down","EPHA8",2046,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0006929 // substrate-dependent cell migration // inferred from sequence or structural similarity /// 0006929 // substrate-dependent cell migration // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // inferred from sequence or structural similarity /// 0007411 // axon guidance // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016322 // neuron remodeling // inferred from sequence or structural similarity /// 0016322 // neuron remodeling // inferred from electronic annotation /// 0030155 // regulation of cell adhesion // inferred from sequence or structural similarity /// 0030155 // regulation of cell adhesion // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0031175 // neuron projection development // inferred from electronic annotation /// 0033628 // regulation of cell adhesion mediated by integrin // inferred from sequence or structural similarity /// 0033628 // regulation of cell adhesion mediated by integrin // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from sequence or structural similarity /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from sequence or structural similarity /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from sequence or structural similarity /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048013 // ephrin receptor signaling pathway // inferred from sequence or structural similarity /// 0048013 // ephrin receptor signaling pathway // inferred from electronic annotation","0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from sequence or structural similarity /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from sequence or structural similarity /// 0043005 // neuron projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005003 // ephrin receptor activity // inferred from electronic annotation /// 0005004 // GPI-linked ephrin receptor activity // inferred from sequence or structural similarity /// 0005004 // GPI-linked ephrin receptor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr1:22889994-22916114 (+) // 83.62 // p36.12"]
["11742443_a_at",0.04242325,0.06355715,-0.08425784,0.025247574,-0.30844355,-0.025247574,0.6930594,0.38764927,1.0792696,0.11005536,1.0792696,"up","PRDM13",59336,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:100054649-100063454 (+) // 95.63 // q16.2"]
["11763254_at",0,-0.10145664,0,-0.1786828,0.023723125,0.06484461,0.9885051,0.9656521,-1.0026239,-0.0037805524,1.0026239,"down","CYAT1 /// IGLC1 /// IGLV1-44","100290481 /// 28823 /// 3537","0006955 // immune response // non-traceable author statement /// 0006956 // complement activation // traceable author statement /// 0006958 // complement activation, classical pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0050776 // regulation of immune response // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005886 // plasma membrane // traceable author statement","0003823 // antigen binding // non-traceable author statement /// 0003823 // antigen binding // inferred from electronic annotation","chr22:22764097-23248558 (+) // 98.34 // q11.22"]
["11733677_at",-0.05780697,-0.020391464,0.08809042,-0.054411888,0.020391464,0.07295132,0.95538265,0.87398183,-1.006732,-0.009679659,1.006732,"down","C4orf50",389197,"","","","chr4:5958838-5990166 (-) // 78.68 // p16.2"]
["11756078_a_at",0.118420124,-0.13379526,-0.007689953,0.007689953,-0.26149607,0.049343586,0.8546636,0.6451499,1.0428025,0.06046588,1.0428025,"up","ARHGEF37",389337,"0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation","chr5:149010633-149014527 (+) // 68.02 // q32"]
["11764007_at",0.14862347,-0.1813674,-0.03472805,0.16296196,0.005364418,-0.005364418,0.78584635,0.5230136,-1.0546844,-0.07681136,1.0546844,"down","CDKL3",51265,"0006464 // cellular protein modification process // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004693 // cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr5:133702266-133702844 (-) // 96.82 // q31.1"]
["11742015_at",0.20317173,-0.024914265,0.007171154,-0.007171154,-0.08405995,0.12486577,0.840059,0.6183184,1.0356941,0.050597984,1.0356941,"up","C11orf34",349633,"","0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:112118875-112131583 (-) // 99.94 // q23.1"]
["11738505_at",0.0051562786,-0.07464695,-0.00515604,-0.17309403,0.13336182,0.09405351,0.87585187,0.6879147,-1.0302464,-0.042989388,1.0302464,"down","KRTAP13-1",140258,"","0005882 // intermediate filament // inferred from electronic annotation","","chr21:31768294-31769136 (+) // 97.91 // q22.11"]
["11749374_a_at",0.14261246,0.008418083,-0.12002373,0.04402542,-0.40878677,-0.008418083,0.73958355,0.45200133,1.0978863,0.13472869,1.0978863,"up","MSN",4478,"0006928 // cellular component movement // traceable author statement /// 0007159 // leukocyte cell-cell adhesion // inferred from expression pattern /// 0022614 // membrane to membrane docking // inferred from expression pattern /// 0050900 // leukocyte migration // inferred from expression pattern /// 2000401 // regulation of lymphocyte migration // inferred from mutant phenotype","0001931 // uropod // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005902 // microvillus // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay /// 0009898 // internal side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0019898 // extrinsic to membrane // inferred from electronic annotation /// 0030175 // filopodium // inferred from direct assay /// 0030667 // secretory granule membrane // inferred from electronic annotation /// 0031527 // filopodium membrane // inferred from electronic annotation /// 0031528 // microvillus membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0050839 // cell adhesion molecule binding // inferred from physical interaction","chr5:25910370-25911588 (+) // 92.19 // p14.1 /// chrX:64953101-64960009 (+) // 95.27 // q12"]
["11723766_at",0.14876842,-0.05046177,-0.038214684,0.03169632,0.037400246,-0.03169632,0.97063214,0.9169865,1.0052567,0.007563884,1.0052567,"up","GFER",2671,"0006626 // protein targeting to mitochondrion // traceable author statement /// 0007283 // spermatogenesis // non-traceable author statement /// 0008283 // cell proliferation // non-traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016972 // thiol oxidase activity // inferred from electronic annotation","chr16:2033676-2037750 (+) // 84.07 // p13.3"]
["11743102_at",0.012701035,0.04372883,-0.040362358,-0.06296253,-0.008859634,0.008859634,0.7481954,0.46565488,1.0184275,0.026343267,1.0184275,"up","PTCD3",55037,"","0005739 // mitochondrion // inferred from electronic annotation","","chr2:86333345-86369280 (+) // 86.86 // p11.2"]
["11748232_a_at",-0.0485363,-0.12189865,0.0485363,0.23999596,0.152421,-0.11883354,0.64599776,0.32920936,-1.0956806,-0.1318273,1.0956806,"down","DIS3",22894,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0006364 // rRNA processing // traceable author statement /// 0006364 // rRNA processing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016075 // rRNA catabolic process // inferred from mutant phenotype /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement /// 0071034 // CUT catabolic process // inferred from mutant phenotype /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0000176 // nuclear exosome (RNase complex) // inferred from direct assay /// 0000178 // exosome (RNase complex) // traceable author statement /// 0000178 // exosome (RNase complex) // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000175 // 3'-5'-exoribonuclease activity // inferred from mutant phenotype /// 0003723 // RNA binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from mutant phenotype /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0004540 // ribonuclease activity // inferred from electronic annotation /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation","chr13:73333181-73356254 (-) // 98.38 // q22.1"]
["11739946_a_at",0.012813568,-0.012813568,-0.024486542,-0.31770563,0.072398186,0.04879427,0.86934596,0.6744612,1.040547,0.05734215,1.040547,"up","PKP1",5317,"0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0007155 // cell adhesion // non-traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005882 // intermediate filament // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0030054 // cell junction // inferred from electronic annotation /// 0030057 // desmosome // non-traceable author statement /// 0030057 // desmosome // inferred from electronic annotation","0004871 // signal transducer activity // traceable author statement /// 0019215 // intermediate filament binding // non-traceable author statement /// 0030280 // structural constituent of epidermis // non-traceable author statement","chr1:201252579-201302115 (+) // 96.23 // q32.1"]
["11744521_x_at",-0.028875351,-0.051952362,-0.14720249,0.028875351,0.077905655,0.035952568,0.21367058,0.034726672,-1.089441,-0.12358799,1.089441,"down","USP39",10713,"0000245 // spliceosomal complex assembly // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:85843300-85876403 (+) // 97.03 // p11.2"]
["11763080_at",0.10760069,-0.12447095,0.15808201,-0.06295848,0.06295848,-0.07240343,0.7748992,0.50496626,1.0505939,0.07120505,1.0505939,"up","","","0006955 // immune response // traceable author statement /// 0009887 // organ morphogenesis // traceable author statement","","","chr8:30274917-30275420 (+) // 68.29 // p12"]
["11723988_a_at",-0.05584669,0.00032949448,0.015700817,-0.05907154,-0.00032949448,0.107216835,0.83684355,0.61295676,-1.0204537,-0.029210713,1.0204537,"down","NR2F2",7026,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001764 // neuron migration // inferred from electronic annotation /// 0001937 // negative regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001945 // lymph vessel development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred by curator /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006629 // lipid metabolic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0009956 // radial pattern formation // inferred from electronic annotation /// 0010596 // negative regulation of endothelial cell migration // inferred from mutant phenotype /// 0030522 // intracellular receptor mediated signaling pathway // inferred from direct assay /// 0030522 // intracellular receptor mediated signaling pathway // traceable author statement /// 0030522 // intracellular receptor mediated signaling pathway // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0045736 // negative regulation of cyclin-dependent protein kinase activity // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0060173 // limb development // inferred from electronic annotation /// 0060849 // regulation of transcription involved in lymphatic endothelial cell fate commitment // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0001972 // retinoic acid binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred by curator /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:96873745-96883489 (+) // 89.47 // q26.2"]
["11740083_x_at",-0.06525016,0.034592867,0.04397607,0.026432276,-0.1573925,-0.026432276,0.7237423,0.429844,1.0402309,0.056903757,1.0402309,"up","AGMO",392636,"0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006643 // membrane lipid metabolic process // inferred from direct assay /// 0046485 // ether lipid metabolic process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005506 // iron ion binding // inferred from mutant phenotype /// 0005506 // iron ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0050479 // glyceryl-ether monooxygenase activity // inferred from direct assay /// 0050479 // glyceryl-ether monooxygenase activity // inferred from electronic annotation","chr7:15239942-15601640 (-) // 87.84 // p21.2"]
["11747955_a_at",-0.12301493,0.03639078,-0.069304466,-0.03639078,0.1396203,0.29577637,0.4560935,0.15819664,-1.1367998,-0.18497822,1.1367998,"down","PDZD3",79849,"0006811 // ion transport // non-traceable author statement /// 0006833 // water transport // non-traceable author statement /// 0007168 // receptor guanylyl cyclase signaling pathway // inferred by curator /// 0009636 // response to toxin // traceable author statement /// 0019934 // cGMP-mediated signaling // non-traceable author statement /// 0030827 // negative regulation of cGMP biosynthetic process // traceable author statement /// 0031283 // negative regulation of guanylate cyclase activity // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005903 // brush border // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0035003 // subapical complex // inferred from direct assay /// 0045177 // apical part of cell // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008200 // ion channel inhibitor activity // traceable author statement /// 0030251 // guanylate cyclase inhibitor activity // inferred from direct assay","chr11:119056182-119060201 (+) // 100.0 // q23.3"]
["11717426_a_at",-0.082060814,-0.07057953,-0.15252781,0.20708561,0.07057953,0.09071255,0.119664736,0.010651782,-1.1683847,-0.22451533,1.1683847,"down","CHMP3 /// RNF103-CHMP3","100526767 /// 51652","0000910 // cytokinesis // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008333 // endosome to lysosome transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0016197 // endosomal transport // traceable author statement /// 0051036 // regulation of endosome size // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from electronic annotation","chr2:86731061-86790620 (-) // 61.91 // p11.2"]
["11753134_a_at",-0.02952671,0.06988716,0.15542841,-0.26880264,0.013221741,-0.013221741,0.5276501,0.21286535,1.1133165,0.15486383,1.1133165,"up","SGK2",10110,"0001558 // regulation of cell growth // traceable author statement /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006979 // response to oxidative stress // traceable author statement /// 0007243 // intracellular protein kinase cascade // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032411 // positive regulation of transporter activity // traceable author statement /// 0042127 // regulation of cell proliferation // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0015459 // potassium channel regulator activity // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017080 // sodium channel regulator activity // non-traceable author statement /// 0017080 // sodium channel regulator activity // traceable author statement","chr20:42194955-42213656 (+) // 99.83 // q13.12"]
["11761878_at",-0.354187,0.31236172,0.15842915,-0.08849716,0.0794878,-0.0794878,0.9094268,0.7597018,1.0485291,0.06836697,1.0485291,"up","PARD3B",117583,"0007049 // cell cycle // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005923 // tight junction // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","","chr2:205410515-205913318 (+) // 84.98 // q33.3"]
["11748292_a_at",0.09010315,0.04639435,-0.044299126,-0.014969826,-0.028997421,0.014969826,0.6924063,0.38700178,1.0283979,0.040398594,1.0283979,"up","GBA /// GBAP1","2629 /// 2630","0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006665 // sphingolipid metabolic process // inferred from electronic annotation /// 0006680 // glucosylceramide catabolic process // inferred from mutant phenotype /// 0006687 // glycosphingolipid metabolic process // traceable author statement /// 0007040 // lysosome organization // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0023021 // termination of signal transduction // inferred from mutant phenotype /// 0032715 // negative regulation of interleukin-6 production // inferred from direct assay /// 0035307 // positive regulation of protein dephosphorylation // inferred from mutant phenotype /// 0043407 // negative regulation of MAP kinase activity // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0046512 // sphingosine biosynthetic process // inferred from mutant phenotype /// 0046513 // ceramide biosynthetic process // inferred from mutant phenotype /// 0050728 // negative regulation of inflammatory response // inferred by curator /// 0071356 // cellular response to tumor necrosis factor // inferred from mutant phenotype","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from sequence or structural similarity /// 0005765 // lysosomal membrane // traceable author statement /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043202 // lysosomal lumen // inferred from sequence or structural similarity /// 0043202 // lysosomal lumen // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004348 // glucosylceramidase activity // inferred from direct assay /// 0004348 // glucosylceramidase activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from sequence or structural similarity /// 0005102 // receptor binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0043169 // cation binding // inferred from electronic annotation","chr1:155184064-155188796 (-) // 99.61 // q22"]
["11743339_s_at",0.12298584,-0.024329662,0.09418392,0.02433014,-0.08449745,-0.17072201,0.40213755,0.122175895,1.102855,0.14124307,1.102855,"up","MFSD11",79157,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr17:74733582-74775336 (+) // 82.75 // q25.1"]
["11742916_x_at",-0.27652073,0.010086536,-0.10932207,-0.010086536,0.054079056,0.14448738,0.39381745,0.1172483,-1.1392455,-0.18807869,1.1392455,"down","LMTK2",22853,"0001881 // receptor recycling // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0018107 // peptidyl-threonine phosphorylation // inferred from direct assay /// 0032456 // endocytic recycling // inferred from mutant phenotype /// 0033572 // transferrin transport // inferred from mutant phenotype /// 0045022 // early endosome to late endosome transport // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay","0005769 // early endosome // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0055037 // recycling endosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004864 // protein phosphatase inhibitor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0070853 // myosin VI binding // inferred from physical interaction","chr7:97736168-97835878 (+) // 99.02 // q21.3"]
["11756226_a_at",0.029449463,-0.08227253,-0.12098122,0.16785908,0.014310837,-0.014310837,0.4996575,0.19051777,-1.0821404,-0.11388775,1.0821404,"down","GRIPAP1",56850,"","0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation","","chrX:48830135-48845036 (-) // 87.54 // p11.23"]
["11760143_at",-0.01600027,0.1091342,-0.017224789,-0.18104267,0.056602478,0.01600027,0.77655584,0.50745356,1.0435138,0.061449643,1.0435138,"up","HLA-F",3134,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // inferred from electronic annotation /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002480 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0050776 // regulation of immune response // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0031901 // early endosome membrane // traceable author statement /// 0042612 // MHC class I protein complex // inferred from electronic annotation /// 0071556 // integral to lumenal side of endoplasmic reticulum membrane // traceable author statement","0032393 // MHC class I receptor activity // traceable author statement","chr6:29691170-29694301 (+) // 97.41 // p22.1"]

{"sheet":"Diff Genes Number","index":2,"n_rows":3,"n_cols":4,"rows_kept":3}
[]
["NO","Comparison","Up-regulated","Down-regulated"]
[1,"KD vs NC",512,340]

{"sheet":"Differential Data","index":3,"n_rows":854,"n_cols":19,"rows_kept":854,"merged":[[0,1,0,3],[0,4,0,6],[0,7,0,8],[0,9,0,12],[0,13,0,18]]}
["Probe","KD","KD","KD","NC","NC","NC","P-value","P-value","Fold change","Fold change","Fold change","Fold change","Annotation","Annotation","Annotation","Annotation","Annotation","Annotation"]
["probeSet","G416-1_(PrimeView).CEL","G416-2_(PrimeView).CEL","G416-3_(PrimeView).CEL","G415-1_(PrimeView).CEL","G415-2_(PrimeView).CEL","G415-3_(PrimeView).CEL","Corrected p-value","P-value","Fold change","Log Fold change","Absolute Fold change","Regulation","Gene Symbol","Entrez Gene","Gene Ontology Biological Process","Gene Ontology Cellular Component","Gene Ontology Molecular Function","Alignments"]
["11718097_a_at",-0.11879635,-0.1821804,-0.15145588,0.44562244,0.20918751,0.11879635,0.015937602,0.014585446,-1.3274704,-0.40867966,1.3274704,"down","MEF2A",4205,"0000002 // mitochondrial genome maintenance // inferred from sequence or structural similarity /// 0000002 // mitochondrial genome maintenance // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000165 // MAPK cascade // inferred from direct assay /// 0000165 // MAPK cascade // inferred from electronic annotation /// 0001568 // blood vessel development // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001782 // B cell homeostasis // inferred from electronic annotation /// 0001947 // heart looping // inferred from electronic annotation /// 0001958 // endochondral ossification // inferred from electronic annotation /// 0001974 // blood vessel remodeling // inferred from electronic annotation /// 0002062 // chondrocyte differentiation // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002467 // germinal center formation // inferred from electronic annotation /// 0002634 // regulation of germinal center formation // inferred from electronic annotation /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0003138 // primary heart field specification // inferred from electronic annotation /// 0003139 // secondary heart field specification // inferred from electronic annotation /// 0003151 // outflow tract morphogenesis // inferred from electronic annotation /// 0003185 // sinoatrial valve morphogenesis // inferred from electronic annotation /// 0003211 // cardiac ventricle formation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006959 // humoral immune response // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007507 // heart development // inferred from expression pattern /// 0007507 // heart development // inferred from electronic annotation /// 0007517 // muscle organ development // non-traceable author statement /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0007521 // muscle cell fate determination // inferred from electronic annotation /// 0007611 // learning or memory // inferred from electronic annotation /// 0008063 // Toll signaling pathway // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0010694 // positive regulation of alkaline phosphatase activity // inferred from electronic annotation /// 0014033 // neural crest cell differentiation // inferred from electronic annotation /// 0014898 // cardiac muscle hypertrophy in response to stress // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0030220 // platelet formation // inferred from electronic annotation /// 0030224 // monocyte differentiation // inferred from electronic annotation /// 0030318 // melanocyte differentiation // inferred from electronic annotation /// 0030501 // positive regulation of bone mineralization // inferred from electronic annotation /// 0030890 // positive regulation of B cell proliferation // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035051 // cardiac cell differentiation // inferred from electronic annotation /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035690 // cellular response to drug // inferred from electronic annotation /// 0035914 // skeletal muscle cell differentiation // inferred from electronic annotation /// 0035984 // cellular response to trichostatin A // inferred from electronic annotation /// 0042100 // B cell proliferation // inferred from electronic annotation /// 0042692 // muscle cell differentiation // traceable author statement /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045165 // cell fate commitment // inferred from electronic annotation /// 0045652 // regulation of megakaryocyte differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048311 // mitochondrion distribution // inferred from sequence or structural similarity /// 0048311 // mitochondrion distribution // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation /// 0048703 // embryonic viscerocranium morphogenesis // inferred from electronic annotation /// 0048704 // embryonic skeletal system morphogenesis // inferred from electronic annotation /// 0048813 // dendrite morphogenesis // inferred from sequence or structural similarity /// 0050680 // negative regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050853 // B cell receptor signaling pathway // inferred from electronic annotation /// 0051145 // smooth muscle cell differentiation // inferred from electronic annotation /// 0051149 // positive regulation of muscle cell differentiation // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0055005 // ventricular cardiac myofibril development // inferred from sequence or structural similarity /// 0055005 // ventricular cardiac myofibril development // inferred from electronic annotation /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0055012 // ventricular cardiac muscle cell differentiation // inferred from electronic annotation /// 0060025 // regulation of synaptic activity // inferred from electronic annotation /// 0060045 // positive regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0060297 // regulation of sarcomere organization // inferred from electronic annotation /// 0060536 // cartilage morphogenesis // inferred from electronic annotation /// 0061333 // renal tubule morphogenesis // inferred from electronic annotation /// 0061337 // cardiac conduction // inferred from sequence or structural similarity /// 0061337 // cardiac conduction // inferred from electronic annotation /// 0070375 // ERK5 cascade // inferred from mutant phenotype /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation /// 0071277 // cellular response to calcium ion // inferred from direct assay /// 0071277 // cellular response to calcium ion // inferred from electronic annotation /// 0071498 // cellular response to fluid shear stress // inferred from electronic annotation /// 0071864 // positive regulation of cell proliferation in bone marrow // inferred from electronic annotation /// 0072102 // glomerulus morphogenesis // inferred from electronic annotation /// 0072160 // nephron tubule epithelial cell differentiation // inferred from electronic annotation /// 0090073 // positive regulation of protein homodimerization activity // inferred from electronic annotation /// 2000111 // positive regulation of macrophage apoptotic process // inferred from electronic annotation /// 2000727 // positive regulation of cardiac muscle cell differentiation // inferred from electronic annotation /// 2000987 // positive regulation of behavioral fear response // inferred from electronic annotation /// 2001013 // epithelial cell proliferation involved in renal tubule morphogenesis // inferred from electronic annotation","0000790 // nuclear chromatin // inferred from sequence or structural similarity /// 0000790 // nuclear chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from direct assay /// 0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0000987 // core promoter proximal region sequence-specific DNA binding // inferred from electronic annotation /// 0001046 // core promoter sequence-specific DNA binding // inferred from electronic annotation /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0001085 // RNA polymerase II transcription factor binding // inferred from physical interaction /// 0001105 // RNA polymerase II transcription coactivator activity // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0033613 // activating transcription factor binding // inferred from physical interaction /// 0033613 // activating transcription factor binding // inferred from electronic annotation /// 0035035 // histone acetyltransferase binding // inferred from physical interaction /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0042826 // histone deacetylase binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046332 // SMAD binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0046983 // protein dimerization activity // inferred from electronic annotation /// 0071837 // HMG box domain binding // inferred from electronic annotation","chr15:100105904-100256689 (+) // 95.34 // q26.3"]
["11759043_at",-0.19077921,-0.2764778,-0.27967453,0.19512415,0.20512247,0.19077921,0.0008942897,0.00011041798,-1.3622446,-0.4459858,1.3622446,"down","VKORC1L1",154807,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr7:65338253-65424545 (+) // 82.1 // q11.21"]
["11736049_at",0.26233292,0.17495155,0.18291712,-0.17495155,-0.3508091,-0.1763258,0.0036513812,0.0024283307,1.3573217,0.4407627,1.3573217,"up","C6orf225",619208,"","","","chr6:112408673-112423547 (+) // 61.5 // q21"]
["11739455_a_at",0.4130926,0.31958103,0.30687046,-0.30687046,-0.5114317,-0.3934164,0.001365887,0.00038529543,1.6822836,0.7504209,1.6822836,"up","SGMS1",259230,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006665 // sphingolipid metabolic process // inferred from electronic annotation /// 0006686 // sphingomyelin biosynthetic process // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0016049 // cell growth // inferred from direct assay /// 0016049 // cell growth // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation /// 0071356 // cellular response to tumor necrosis factor // inferred from electronic annotation","0000138 // Golgi trans cisterna // inferred from direct assay /// 0000139 // Golgi membrane // traceable author statement /// 0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030173 // integral to Golgi membrane // inferred from direct assay","0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0033188 // sphingomyelin synthase activity // inferred from mutant phenotype /// 0033188 // sphingomyelin synthase activity // inferred from electronic annotation /// 0047493 // ceramide cholinephosphotransferase activity // inferred from direct assay","chr10:52065359-52383737 (-) // 98.65 // q11.23"]
["11719476_at",-0.71326685,-0.4031391,-0.4664297,0.59003067,0.4031391,0.42827225,0.0018447193,0.0008437088,-2.001978,-1.001426,2.001978,"down","FAM210B",116151,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr20:54934013-54943719 (+) // 77.91 // q13.2"]
["11722479_a_at",-0.189785,-0.15629673,-0.17467213,0.2668743,0.32018566,0.15629673,0.0020261612,0.0010226791,-1.3391988,-0.4213702,1.3391988,"down","CUL5",8065,"0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006970 // response to osmotic stress // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051480 // cytosolic calcium ion homeostasis // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // traceable author statement","0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0031461 // cullin-RING ubiquitin ligase complex // inferred from electronic annotation /// 0031466 // Cul5-RING ubiquitin ligase complex // inferred from direct assay","0004872 // receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0005262 // calcium channel activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from direct assay /// 0031625 // ubiquitin protein ligase binding // inferred from electronic annotation","chr11:107879406-107978739 (+) // 97.76 // q22.3"]
["11746856_a_at",0.20501328,0.21613598,0.17624378,-0.29546356,-0.32691526,-0.1762433,0.0016010772,0.00060374127,1.3806411,0.46533838,1.3806411,"up","SERPINE1",5054,"0000302 // response to reactive oxygen species // inferred from electronic annotation /// 0001300 // chronological cell aging // inferred from expression pattern /// 0001525 // angiogenesis // inferred from expression pattern /// 0002576 // platelet degranulation // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010469 // regulation of receptor activity // inferred from direct assay /// 0010757 // negative regulation of plasminogen activation // inferred from direct assay /// 0010757 // negative regulation of plasminogen activation // inferred from mutant phenotype /// 0010951 // negative regulation of endopeptidase activity // inferred from direct assay /// 0014912 // negative regulation of smooth muscle cell migration // inferred from direct assay /// 0030168 // platelet activation // traceable author statement /// 0030194 // positive regulation of blood coagulation // inferred from mutant phenotype /// 0030195 // negative regulation of blood coagulation // inferred by curator /// 0030336 // negative regulation of cell migration // inferred from direct assay /// 0032757 // positive regulation of interleukin-8 production // inferred from mutant phenotype /// 0033629 // negative regulation of cell adhesion mediated by integrin // inferred from direct assay /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0035491 // positive regulation of leukotriene production involved in inflammatory response // inferred from mutant phenotype /// 0042060 // wound healing // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042246 // tissue regeneration // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0042730 // fibrinolysis // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0045765 // regulation of angiogenesis // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype /// 0048260 // positive regulation of receptor-mediated endocytosis // inferred from direct assay /// 0048260 // positive regulation of receptor-mediated endocytosis // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred from genetic interaction /// 0050820 // positive regulation of coagulation // inferred from electronic annotation /// 0050829 // defense response to Gram-negative bacterium // inferred from genetic interaction /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051918 // negative regulation of fibrinolysis // inferred from direct assay /// 0055093 // response to hyperoxia // inferred from electronic annotation /// 0061044 // negative regulation of vascular wound healing // inferred from genetic interaction /// 0061045 // negative regulation of wound healing // inferred by curator /// 0070887 // cellular response to chemical stimulus // inferred from mutant phenotype /// 0071222 // cellular response to lipopolysaccharide // inferred from mutant phenotype /// 0071258 // cellular response to gravity // inferred from electronic annotation /// 0090026 // positive regulation of monocyte chemotaxis // inferred from mutant phenotype /// 2000098 // negative regulation of smooth muscle cell-matrix adhesion // inferred from direct assay","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0031093 // platelet alpha granule lumen // traceable author statement","0002020 // protease binding // inferred from physical interaction /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from direct assay /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from physical interaction /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr7:100770383-100781574 (+) // 89.86 // q22.1"]
["11727949_at",-0.18195915,-0.19709969,-0.22783661,0.38424015,0.40268326,0.18195915,0.0030210405,0.0018748145,-1.4391923,-0.5252593,1.4391923,"down","DHX33",56919,"0045943 // positive regulation of transcription from RNA polymerase I promoter // inferred from direct assay /// 0045943 // positive regulation of transcription from RNA polymerase I promoter // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000182 // rDNA binding // inferred from direct assay /// 0000182 // rDNA binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0033613 // activating transcription factor binding // inferred from electronic annotation","chr17:5345461-5372380 (-) // 88.99 // p13.2"]
["11733057_a_at",0.27127934,0.19888687,0.27145576,-0.19888687,-0.2912693,-0.3797922,0.0017275709,0.0007330584,1.4511435,0.53719014,1.4511435,"up","PTBP3",9991,"0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0033119 // negative regulation of RNA splicing // inferred from direct assay /// 0043249 // erythrocyte maturation // inferred from electronic annotation /// 0045595 // regulation of cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement","chr9:114980718-115095912 (-) // 94.87 // q32"]
["11730774_at",0.26904392,0.35275555,0.23015308,-0.32134342,-0.2766943,-0.23015308,0.0011434965,0.00023426324,1.474318,0.56004775,1.474318,"up","TMEM14A",28978,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:52535883-52551386 (+) // 88.43 // p12.2"]
["11719730_at",0.18863726,0.18644762,0.22762012,-0.3717537,-0.20364761,-0.18644762,0.0028132095,0.0016864719,1.3706416,0.45485133,1.3706416,"up","INA",9118,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042246 // tissue regeneration // inferred from electronic annotation /// 0045104 // intermediate filament cytoskeleton organization // inferred from electronic annotation /// 0060052 // neurofilament cytoskeleton organization // inferred from electronic annotation","0005882 // intermediate filament // inferred from electronic annotation /// 0005883 // neurofilament // inferred from electronic annotation /// 0005883 // neurofilament // traceable author statement","0005198 // structural molecule activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement","chr10:105036896-105050108 (+) // 98.06 // q24.33"]
["11737996_at",0.7015357,0.54428434,0.25306368,-0.25306368,-0.35005808,-0.27960968,0.005473863,0.004125435,1.733721,0.79387176,1.733721,"up","LRRC3",81543,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr21:45875367-45878739 (+) // 73.93 // q22.3"]
["11722903_s_at",0.22649956,0.28641033,0.31917763,-0.34090853,-0.3308878,-0.22650003,0.0011259156,0.00022387244,1.4915317,0.5767946,1.4915317,"up","GSTT2B","2953 /// 653689","","0005737 // cytoplasm // inferred from electronic annotation","0004364 // glutathione transferase activity // inferred from electronic annotation /// 0004364 // glutathione transferase activity // non-traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation","chr22:24322338-24326106 (+) // 68.89 // q11.23"]
["11722687_a_at",0.36877155,0.5827007,0.59617805,-0.43266487,-0.36877155,-0.43786144,0.001213793,0.00026979306,1.903933,0.92898273,1.903933,"up","LIFR",3977,"0007166 // cell surface receptor signaling pathway // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from direct assay /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0034097 // response to cytokine stimulus // inferred from direct assay /// 0038165 // oncostatin-M-mediated signaling pathway // inferred from direct assay /// 0042221 // response to chemical stimulus // inferred from electronic annotation /// 0045768 // positive regulation of anti-apoptosis // inferred from electronic annotation /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0048861 // leukemia inhibitory factor signaling pathway // inferred from direct assay /// 0048861 // leukemia inhibitory factor signaling pathway // traceable author statement /// 0048861 // leukemia inhibitory factor signaling pathway // inferred from electronic annotation /// 0070120 // ciliary neurotrophic factor-mediated signaling pathway // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004896 // cytokine receptor activity // inferred from electronic annotation /// 0004897 // ciliary neurotrophic factor receptor activity // inferred from direct assay /// 0004923 // leukemia inhibitory factor receptor activity // inferred from direct assay /// 0004923 // leukemia inhibitory factor receptor activity // inferred from electronic annotation /// 0004923 // leukemia inhibitory factor receptor activity // traceable author statement /// 0004924 // oncostatin-M receptor activity // inferred from direct assay /// 0005127 // ciliary neurotrophic factor receptor binding // inferred from physical interaction /// 0019838 // growth factor binding // inferred from physical interaction /// 0019955 // cytokine binding // inferred from electronic annotation","chr5:38475026-38556748 (-) // 98.68 // p13.1"]
["11759318_x_at",-0.3096285,-0.19052696,-0.23727417,0.19052696,0.24318886,0.2295618,0.0011812649,0.00025385493,-1.3821387,-0.4669024,1.3821387,"down","ISG20L2",81875,"0042254 // ribosome biogenesis // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation","chr1:156691675-156698227 (-) // 76.0 // q23.1"]
["11719591_s_at",-0.37611198,-0.43548584,-0.3994751,0.39750957,0.37611198,0.3819456,0.00031084043,1.7739021e-6,-1.7277327,-0.78888,1.7277327,"down","GLTP",51228,"0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0046836 // glycolipid transport // inferred from direct assay /// 0046836 // glycolipid transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred by curator","0008289 // lipid binding // inferred from direct assay /// 0017089 // glycolipid transporter activity // inferred from direct assay /// 0017089 // glycolipid transporter activity // inferred from electronic annotation /// 0051861 // glycolipid binding // inferred from direct assay /// 0051861 // glycolipid binding // inferred from electronic annotation","chr12:110288747-110318309 (-) // 68.35 // q24.11"]
["11750906_at",-0.5378809,-0.2914152,-0.4349947,0.2914152,0.34627914,0.34119225,0.0015215367,0.00052814756,-1.6791438,-0.7477258,1.6791438,"down","RAD1",5810,"0000075 // cell cycle checkpoint // non-traceable author statement /// 0000075 // cell cycle checkpoint // traceable author statement /// 0000077 // DNA damage checkpoint // inferred from mutant phenotype /// 0000077 // DNA damage checkpoint // traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006974 // response to DNA damage stimulus // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007128 // meiotic prophase I // traceable author statement /// 0071479 // cellular response to ionizing radiation // inferred from direct assay /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement","0003684 // damaged DNA binding // non-traceable author statement /// 0003684 // damaged DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // traceable author statement /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008408 // 3'-5' exonuclease activity // inferred from direct assay /// 0008408 // 3'-5' exonuclease activity // traceable author statement /// 0008853 // exodeoxyribonuclease III activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr5:34908295-34915733 (-) // 75.76 // p13.2"]
["11751224_x_at",0.20609379,0.24343777,0.21337128,-0.22495842,-0.27476788,-0.20609379,0.00067191356,4.1198415e-5,1.3719624,0.45624095,1.3719624,"up","MAPK1",5594,"0000165 // MAPK cascade // traceable author statement /// 0000165 // MAPK cascade // inferred from electronic annotation /// 0000186 // activation of MAPKK activity // traceable author statement /// 0000187 // activation of MAPK activity // traceable author statement /// 0000189 // MAPK import into nucleus // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0006935 // chemotaxis // traceable author statement /// 0006950 // response to stress // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009636 // response to toxin // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010800 // positive regulation of peptidyl-threonine phosphorylation // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0019233 // sensory perception of pain // inferred from electronic annotation /// 0019858 // cytosine metabolic process // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032872 // regulation of stress-activated MAPK cascade // traceable author statement /// 0033598 // mammary gland epithelial cell proliferation // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0042221 // response to chemical stimulus // inferred from electronic annotation /// 0043330 // response to exogenous dsRNA // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050852 // T cell receptor signaling pathway // inferred from electronic annotation /// 0050853 // B cell receptor signaling pathway // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0051493 // regulation of cytoskeleton organization // traceable author statement /// 0060397 // JAK-STAT cascade involved in growth hormone signaling pathway // traceable author statement /// 0060716 // labyrinthine layer blood vessel development // inferred from electronic annotation /// 0070371 // ERK1 and ERK2 cascade // inferred from direct assay /// 0070371 // ERK1 and ERK2 cascade // traceable author statement /// 0072584 // caveolin-mediated endocytosis // traceable author statement /// 0090170 // regulation of Golgi inheritance // traceable author statement /// 2000641 // regulation of early endosome to late endosome transport // traceable author statement","0005625 // soluble fraction // inferred from electronic annotation /// 0005626 // insoluble fraction // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005769 // early endosome // traceable author statement /// 0005770 // late endosome // traceable author statement /// 0005794 // Golgi apparatus // traceable author statement /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005901 // caveola // traceable author statement /// 0005925 // focal adhesion // traceable author statement /// 0031143 // pseudopodium // inferred from electronic annotation /// 0032839 // dendrite cytoplasm // inferred from electronic annotation /// 0033267 // axon part // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0001784 // phosphotyrosine binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004707 // MAP kinase activity // inferred from electronic annotation /// 0004707 // MAP kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008353 // RNA polymerase II carboxy-terminal domain kinase activity // inferred from sequence or structural similarity /// 0008353 // RNA polymerase II carboxy-terminal domain kinase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019902 // phosphatase binding // inferred from physical interaction /// 0031435 // mitogen-activated protein kinase kinase kinase binding // inferred from electronic annotation","chr22:22118314-22221938 (-) // 98.04 // q11.21"]
["11745790_a_at",0.21875381,0.1376934,0.17807388,-0.1376934,-0.34515333,-0.3854065,0.005672084,0.004318796,1.382799,0.46759146,1.382799,"up","TMEM135",65084,"0007031 // peroxisome organization // inferred from sequence or structural similarity","0005777 // peroxisome // inferred from sequence or structural similarity /// 0005777 // peroxisome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:86748883-87034802 (+) // 99.04 // q14.2"]
["11743648_a_at",0.17151451,0.15586662,0.15340805,-0.15340805,-0.2993021,-0.24027252,0.0017953549,0.0007910198,1.3115358,0.3912573,1.3115358,"up","DCAF6",55827,"0016567 // protein ubiquitination // inferred by curator /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0080008 // CUL4-RING ubiquitin ligase complex // inferred from direct assay","0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from direct assay","chr1:167905484-168045081 (+) // 95.47 // q24.2"]
["11715934_s_at",0.34877396,0.3229413,0.28343296,-0.28343296,-0.49161482,-0.3422613,0.0014235608,0.00043871574,1.6141998,0.69081914,1.6141998,"up","TAGLN",6876,"0007517 // muscle organ development // inferred from electronic annotation /// 0007517 // muscle organ development // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation","chr11:117070039-117075510 (+) // 97.59 // q23.3"]
["11748865_a_at",0.3122244,0.32123184,0.23886395,-0.23886395,-0.38387203,-0.34894276,0.001213793,0.00026943727,1.5312039,0.61466634,1.5312039,"up","TMEM139",135932,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr7:142983030-142984389 (+) // 82.1 // q34"]
["11740489_at",0.49190855,0.5185833,0.54396534,-0.6413474,-0.49190855,-0.6660104,0.0006672249,3.830129e-5,2.1703203,1.1179079,2.1703203,"up","MAPK9",5601,"0000165 // MAPK cascade // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006950 // response to stress // traceable author statement /// 0007254 // JNK cascade // inferred from direct assay /// 0007254 // JNK cascade // traceable author statement /// 0007258 // JUN phosphorylation // inferred from direct assay /// 0008063 // Toll signaling pathway // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0010744 // positive regulation of macrophage derived foam cell differentiation // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0031558 // induction of apoptosis in response to chemical stimulus // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0046686 // response to cadmium ion // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004705 // JUN kinase activity // inferred from direct assay /// 0004707 // MAP kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr5:179673021-179719071 (-) // 95.9 // q35.3"]
["11731061_at",-0.19905615,-0.1633048,-0.16293097,0.22745848,0.16293049,0.27393818,0.0012713709,0.0003213359,-1.3163469,-0.3965397,1.3163469,"down","ZNF516",9658,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr18:74071440-74207146 (-) // 97.62 // q23"]
["11747825_a_at",0.24491072,0.206563,0.21240568,-0.3398447,-0.206563,-0.24695349,0.0012306612,0.0002967754,1.4003106,0.48574686,1.4003106,"up","NPHP3-ACAD11","100532724 /// 27031 /// 84129","0006629 // lipid metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0033539 // fatty acid beta-oxidation using acyl-CoA dehydrogenase // inferred from direct assay /// 0045494 // photoreceptor cell maintenance // inferred from mutant phenotype /// 0048496 // maintenance of organ identity // inferred from mutant phenotype /// 0048496 // maintenance of organ identity // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060271 // cilium morphogenesis // inferred from sequence or structural similarity /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from direct assay /// 2000095 // regulation of Wnt receptor signaling pathway, planar cell polarity pathway // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005777 // peroxisome // inferred from sequence or structural similarity /// 0005777 // peroxisome // inferred from electronic annotation /// 0005871 // kinesin complex // inferred from electronic annotation /// 0005929 // cilium // inferred from direct assay /// 0005929 // cilium // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0072372 // primary cilium // inferred from direct assay","0003777 // microtubule motor activity // inferred from electronic annotation /// 0003995 // acyl-CoA dehydrogenase activity // inferred from electronic annotation /// 0004466 // long-chain-acyl-CoA dehydrogenase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016627 // oxidoreductase activity, acting on the CH-CH group of donors // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017099 // very-long-chain-acyl-CoA dehydrogenase activity // inferred from direct assay /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation /// 0070991 // medium-chain-acyl-CoA dehydrogenase activity // inferred from direct assay","chr3:132294614-132345921 (-) // 89.18 // q22.1"]
["11725861_a_at",0.5248928,0.41057587,0.43120575,-0.46441555,-0.4105754,-0.5880704,0.00090130133,0.00011761167,1.9228487,0.9432453,1.9228487,"up","MYBL1",4603,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation","chr8:67474410-67525484 (-) // 97.22 // q13.1"]
["11747135_x_at",0.3315673,0.16510916,0.17557144,-0.2106781,-0.17387533,-0.16510916,0.0029874577,0.0018488272,1.3262048,0.4073035,1.3262048,"up","CNTRL",11064,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr9:123914320-123939888 (+) // 95.08 // q33.2"]
["11716183_a_at",-0.21830654,-0.22143078,-0.1452589,0.19926357,0.23232555,0.1452589,0.0013797177,0.00040272367,-1.3079264,-0.38728142,1.3079264,"down","ALCAM",214,"0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from electronic annotation","0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0005102 // receptor binding // traceable author statement","chr3:105085712-105295746 (+) // 96.66 // q13.11"]
["11744170_s_at",0.22834063,0.19635391,0.13889122,-0.28687286,-0.28563356,-0.1388917,0.0026835494,0.0015798501,1.3425676,0.42499465,1.3425676,"up","NAT14",57106,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006352 // transcription initiation, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement","0005634 // nucleus // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0008080 // N-acetyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation","chr19:55996370-55998933 (+) // 94.98 // q13.42"]
["11726048_x_at",0.36135387,0.13059235,0.27170372,-0.13270998,-0.13323307,-0.13059187,0.005855648,0.0045140437,1.3074251,0.3867283,1.3074251,"up","ASXL2",55252,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0035360 // positive regulation of peroxisome proliferator activated receptor signaling pathway // inferred from direct assay /// 0045600 // positive regulation of fat cell differentiation // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation","0042975 // peroxisome proliferator activated receptor binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:25960346-26101385 (-) // 97.95 // p23.3"]
["11724015_at",-0.1398716,-0.2044034,-0.19591999,0.55942345,0.13987112,0.19977236,0.023705922,0.022378717,-1.3945059,-0.47975397,1.3945059,"down","FRA10AC1",118924,"","0005634 // nucleus // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr10:95428327-95462338 (-) // 79.45 // q23.33"]
["11757487_x_at",-0.26286793,-0.27002716,-0.17973709,0.3283701,0.17973709,0.23265266,0.0017505207,0.00075328216,-1.399066,-0.484464,1.399066,"down","ESRRA",2101,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0030278 // regulation of ossification // inferred from electronic annotation /// 0030522 // intracellular receptor mediated signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0045667 // regulation of osteoblast differentiation // inferred from electronic annotation /// 0045670 // regulation of osteoclast differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051216 // cartilage development // inferred from electronic annotation","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // traceable author statement /// 0005496 // steroid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:64083709-64084210 (+) // 96.77 // q13.1 /// chr13:21835994-21836496 (+) // 91.81 // q12.11 /// chr13:20133379-20133880 (-) // 91.16 // q12.11"]
["11715629_a_at",-0.13700676,-0.22053051,-0.20950699,0.31722927,0.2726984,0.13700676,0.0031878275,0.0020085236,-1.3484726,-0.4313262,1.3484726,"down","LAPTM4A",9741,"0006810 // transport // inferred from electronic annotation","0005794 // Golgi apparatus // inferred from direct assay /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:20232411-20251789 (-) // 97.78 // p24.1"]
["11759029_at",-0.3919487,-0.45144176,-0.285151,0.7651448,0.4253006,0.285151,0.0058352747,0.0044933124,-1.8251891,-0.868046,1.8251891,"down","BRI3BP",140707,"","0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:125478182-125514098 (+) // 79.73 // q24.31"]
["11728681_s_at",0.23003197,0.20291138,0.24664497,-0.20291138,-0.2551422,-0.57511044,0.009647093,0.008172193,1.4854679,0.5709174,1.4854679,"up","PAIP1",10605,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016070 // RNA metabolic process // inferred from electronic annotation /// 0016071 // mRNA metabolic process // traceable author statement /// 0045727 // positive regulation of translation // inferred from direct assay /// 0048255 // mRNA stabilization // traceable author statement","0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008494 // translation activator activity // inferred from direct assay","chr5:43526368-43557195 (-) // 96.94 // p12"]
["11725423_a_at",0.17654228,0.20459223,0.19223738,-0.1826458,-0.17654228,-0.22459221,0.00059550256,2.311849e-5,1.3065093,0.3857174,1.3065093,"up","ZNF521",25925,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006959 // humoral immune response // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0009887 // organ morphogenesis // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0051573 // negative regulation of histone H3-K9 methylation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr18:22641889-22932214 (-) // 99.64 // q11.2"]
["11721894_at",0.5881109,0.3695488,0.4125042,-0.3695488,-0.5677824,-0.5579448,0.0014867174,0.0005046402,1.9387767,0.9551467,1.9387767,"up","GAS1",2619,"0002053 // positive regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0007411 // axon guidance // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008589 // regulation of smoothened signaling pathway // inferred from sequence or structural similarity /// 0008589 // regulation of smoothened signaling pathway // inferred from electronic annotation /// 0009953 // dorsal/ventral pattern formation // inferred from electronic annotation /// 0010955 // negative regulation of protein processing // inferred from mutant phenotype /// 0012501 // programmed cell death // inferred from electronic annotation /// 0021587 // cerebellum morphogenesis // inferred from electronic annotation /// 0021904 // dorsal/ventral neural tube patterning // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from electronic annotation /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from expression pattern /// 0042473 // outer ear morphogenesis // inferred from electronic annotation /// 0042474 // middle ear morphogenesis // inferred from electronic annotation /// 0042476 // odontogenesis // inferred from electronic annotation /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from sequence or structural similarity /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043010 // camera-type eye development // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045165 // cell fate commitment // inferred from sequence or structural similarity /// 0045165 // cell fate commitment // inferred from electronic annotation /// 0045879 // negative regulation of smoothened signaling pathway // inferred from electronic annotation /// 0045880 // positive regulation of smoothened signaling pathway // inferred from electronic annotation /// 0045930 // negative regulation of mitotic cell cycle // inferred from direct assay /// 0045930 // negative regulation of mitotic cell cycle // inferred from genetic interaction /// 0048589 // developmental growth // inferred from sequence or structural similarity /// 0048589 // developmental growth // inferred from electronic annotation /// 0048592 // eye morphogenesis // inferred from electronic annotation /// 0048598 // embryonic morphogenesis // inferred from electronic annotation /// 0048701 // embryonic cranial skeleton morphogenesis // inferred from electronic annotation /// 0048706 // embryonic skeletal system development // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050680 // negative regulation of epithelial cell proliferation // inferred from electronic annotation /// 0060021 // palate development // inferred from electronic annotation /// 0060628 // regulation of ER to Golgi vesicle-mediated transport // inferred from mutant phenotype","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0031225 // anchored to membrane // inferred from electronic annotation /// 0046658 // anchored to plasma membrane // inferred from sequence or structural similarity /// 0046658 // anchored to plasma membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr9:89559274-89562241 (-) // 90.64 // q21.33"]
["11721902_a_at",0.18941355,0.1905508,0.2443347,-0.29262066,-0.20098114,-0.18941355,0.0012464859,0.00030813218,1.352634,0.43577147,1.352634,"up","SERPINI1",5274,"0007417 // central nervous system development // traceable author statement /// 0007422 // peripheral nervous system development // traceable author statement /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // not recorded /// 0030155 // regulation of cell adhesion // inferred from electronic annotation /// 0030162 // regulation of proteolysis // not recorded","0005576 // extracellular region // inferred from electronic annotation","0004867 // serine-type endopeptidase inhibitor activity // not recorded /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // traceable author statement /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr3:167453510-167543560 (+) // 99.62 // q26.1"]
["11727743_at",0.18654919,0.2713871,0.27536964,-0.35228586,-0.37898207,-0.18654919,0.0022204556,0.0011832309,1.4644657,0.5503744,1.4644657,"up","CAMK2N2",94032,"0006469 // negative regulation of protein kinase activity // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0004860 // protein kinase inhibitor activity // inferred from electronic annotation","chr3:183977004-183979255 (-) // 77.88 // q27.1"]
["11723796_a_at",0.16265965,0.3022132,0.15775633,-0.20179224,-0.2226386,-0.1577568,0.0024881244,0.0014133662,1.3209772,0.4016056,1.3209772,"up","SFMBT1",51460,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","","chr3:52938170-53079301 (-) // 97.73 // p21.1"]
["11717812_a_at",0.5195451,0.56328773,0.35490227,-0.35490274,-0.46046782,-0.36069632,0.001213793,0.00026900903,1.829269,0.8712673,1.829269,"up","KIF3C",3797,"0007018 // microtubule-based movement // traceable author statement /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005871 // kinesin complex // traceable author statement /// 0005874 // microtubule // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // traceable author statement /// 0003777 // microtubule motor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation","chr2:26149466-26205533 (-) // 92.82 // p23.3"]
["11717294_a_at",-0.21785545,-0.29126167,-0.30094242,0.34286022,0.21785545,0.27743912,0.0011765101,0.00025001014,-1.4634818,-0.5494048,1.4634818,"down","SRSF7",6432,"0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from direct assay /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0048025 // negative regulation of nuclear mRNA splicing, via spliceosome // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:38970740-38978636 (-) // 96.89 // p22.1"]
["11722351_at",-0.5421052,-0.41376066,-0.37093925,0.3995185,0.541482,0.37093925,0.0012233602,0.00028176705,-1.8398416,-0.8795816,1.8398416,"down","SRSF8",10929,"0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr11:94800040-94804231 (+) // 71.92 // q21"]
["11754620_s_at",0.35463428,0.23556519,0.37804222,-0.23556519,-0.34778595,-0.24163055,0.001459056,0.00047431968,1.5133452,0.5977411,1.5133452,"up","PKP4",8502,"0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0032321 // positive regulation of Rho GTPase activity // inferred from direct assay /// 0071777 // positive regulation of cell cycle cytokinesis // inferred from mutant phenotype","0000922 // spindle pole // inferred from direct assay /// 0000922 // spindle pole // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // traceable author statement /// 0009898 // internal side of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030057 // desmosome // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0030496 // midbody // inferred from electronic annotation /// 0051233 // spindle midzone // inferred from direct assay /// 0072686 // mitotic spindle // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr2:159499031-159537938 (+) // 99.78 // q24.1"]
["11720289_a_at",0.13321877,0.08916283,0.123000145,-0.08916283,-0.40415382,-0.34895992,0.01694084,0.0156203,1.3157506,0.3958861,1.3157506,"up","CDC42BPA",8476,"0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007097 // nuclear migration // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // inferred from mutant phenotype /// 0031032 // actomyosin structure organization // inferred from mutant phenotype /// 0031532 // actin cytoskeleton reorganization // inferred from direct assay /// 0031532 // actin cytoskeleton reorganization // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from sequence or structural similarity /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from sequence or structural similarity /// 0031252 // cell leading edge // inferred from electronic annotation /// 0042641 // actomyosin // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005083 // small GTPase regulator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:227177562-227506193 (-) // 95.95 // q42.13"]
["11731782_s_at",0.189085,0.24749184,0.22444344,-0.20715714,-0.189085,-0.21452904,0.0005783946,2.1908945e-5,1.3415775,0.42393047,1.3415775,"up","CT45A2","441519 /// 441520 /// 441521 /// 541465 /// 541466 /// 728911","","","","chrX:134928583-134933050 (-) // 75.7 // q26.3"]
["11748382_a_at",0.34924603,0.20835066,0.21676683,-0.20835066,-0.27699804,-0.32687426,0.0017505207,0.0007564604,1.4427907,0.5288621,1.4427907,"up","SMURF2",64750,"0006464 // cellular protein modification process // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0007179 // transforming growth factor beta receptor signaling pathway // not recorded /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0017015 // regulation of transforming growth factor beta receptor signaling pathway // non-traceable author statement /// 0030509 // BMP signaling pathway // traceable author statement /// 0030579 // ubiquitin-dependent SMAD protein catabolic process // inferred from direct assay /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // not recorded /// 0045892 // negative regulation of transcription, DNA-dependent // non-traceable author statement","0000151 // ubiquitin ligase complex // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // not recorded /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0046332 // SMAD binding // inferred from physical interaction","chr17:62541906-62658079 (-) // 98.4 // q23.3"]
["11731782_s_at",0.189085,0.24749184,0.22444344,-0.20715714,-0.189085,-0.21452904,0.0005783946,2.1908945e-5,1.3415775,0.42393047,1.3415775,"up","CT45A1","441519 /// 441520 /// 441521 /// 541465 /// 541466 /// 728911","","","","chrX:134928583-134933050 (-) // 75.7 // q26.3"]
["11747825_a_at",0.24491072,0.206563,0.21240568,-0.3398447,-0.206563,-0.24695349,0.0012306612,0.0002967754,1.4003106,0.48574686,1.4003106,"up","ACAD11","100532724 /// 27031 /// 84129","0006629 // lipid metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0033539 // fatty acid beta-oxidation using acyl-CoA dehydrogenase // inferred from direct assay /// 0045494 // photoreceptor cell maintenance // inferred from mutant phenotype /// 0048496 // maintenance of organ identity // inferred from mutant phenotype /// 0048496 // maintenance of organ identity // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060271 // cilium morphogenesis // inferred from sequence or structural similarity /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from direct assay /// 2000095 // regulation of Wnt receptor signaling pathway, planar cell polarity pathway // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005777 // peroxisome // inferred from sequence or structural similarity /// 0005777 // peroxisome // inferred from electronic annotation /// 0005871 // kinesin complex // inferred from electronic annotation /// 0005929 // cilium // inferred from direct assay /// 0005929 // cilium // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0072372 // primary cilium // inferred from direct assay","0003777 // microtubule motor activity // inferred from electronic annotation /// 0003995 // acyl-CoA dehydrogenase activity // inferred from electronic annotation /// 0004466 // long-chain-acyl-CoA dehydrogenase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016627 // oxidoreductase activity, acting on the CH-CH group of donors // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017099 // very-long-chain-acyl-CoA dehydrogenase activity // inferred from direct assay /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation /// 0070991 // medium-chain-acyl-CoA dehydrogenase activity // inferred from direct assay","chr3:132294614-132345921 (-) // 89.18 // q22.1"]
["11731782_s_at",0.189085,0.24749184,0.22444344,-0.20715714,-0.189085,-0.21452904,0.0005783946,2.1908945e-5,1.3415775,0.42393047,1.3415775,"up","CT45A4","441519 /// 441520 /// 441521 /// 541465 /// 541466 /// 728911","","","","chrX:134928583-134933050 (-) // 75.7 // q26.3"]
["11731782_s_at",0.189085,0.24749184,0.22444344,-0.20715714,-0.189085,-0.21452904,0.0005783946,2.1908945e-5,1.3415775,0.42393047,1.3415775,"up","CT45A3","441519 /// 441520 /// 441521 /// 541465 /// 541466 /// 728911","","","","chrX:134928583-134933050 (-) // 75.7 // q26.3"]
["11731782_s_at",0.189085,0.24749184,0.22444344,-0.20715714,-0.189085,-0.21452904,0.0005783946,2.1908945e-5,1.3415775,0.42393047,1.3415775,"up","CT45A6","441519 /// 441520 /// 441521 /// 541465 /// 541466 /// 728911","","","","chrX:134928583-134933050 (-) // 75.7 // q26.3"]
["11731782_s_at",0.189085,0.24749184,0.22444344,-0.20715714,-0.189085,-0.21452904,0.0005783946,2.1908945e-5,1.3415775,0.42393047,1.3415775,"up","CT45A5","441519 /// 441520 /// 441521 /// 541465 /// 541466 /// 728911","","","","chrX:134928583-134933050 (-) // 75.7 // q26.3"]
["11743269_a_at",-0.45076752,-0.33353806,-0.24528265,0.3487339,0.2621889,0.24528313,0.0017445587,0.0007438041,-1.5460619,-0.62859803,1.5460619,"down","SRSF1",6426,"0000395 // nuclear mRNA 5'-splice site recognition // inferred from direct assay /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006376 // mRNA splice site selection // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from physical interaction /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0050733 // RS domain binding // inferred from electronic annotation","chr17:56078235-56084707 (-) // 92.16 // q22"]
["11757141_s_at",-0.1699009,-0.22678757,-0.17999649,0.1699009,0.29947758,0.19419289,0.0016760693,0.0006815215,-1.3318381,-0.41341877,1.3318381,"down","SNORA25","100302240 /// 654320 /// 677792 /// 677805 /// 677822 /// 684959 /// 692063 /// 692072 /// 79101","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr11:93463682-93463812 (-) // 97.01 // q21"]
["11757141_s_at",-0.1699009,-0.22678757,-0.17999649,0.1699009,0.29947758,0.19419289,0.0016760693,0.0006815215,-1.3318381,-0.41341877,1.3318381,"down","TAF1D","100302240 /// 654320 /// 677792 /// 677805 /// 677822 /// 684959 /// 692063 /// 692072 /// 79101","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr11:93463682-93463812 (-) // 97.01 // q21"]
["11754085_a_at",-0.18918324,-0.18363762,-0.29081059,0.18363762,0.26697636,0.20084476,0.0015215367,0.0005270031,-1.3550662,-0.43836337,1.3550662,"down","PMVK",10654,"0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // inferred from direct assay /// 0006695 // cholesterol biosynthetic process // traceable author statement /// 0006695 // cholesterol biosynthetic process // inferred from electronic annotation /// 0008299 // isoprenoid biosynthetic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // inferred from direct assay /// 0016126 // sterol biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019287 // isopentenyl diphosphate biosynthetic process, mevalonate pathway // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0070723 // response to cholesterol // inferred from expression pattern","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004631 // phosphomevalonate kinase activity // inferred from direct assay /// 0004631 // phosphomevalonate kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr1:154897427-154909276 (-) // 86.41 // q21.3"]
["11717722_s_at",-0.20409584,-0.17448997,-0.1455679,0.3712597,0.45161247,0.1455679,0.007317322,0.0059212954,-1.4117956,-0.49753127,1.4117956,"down","ASAH1",427,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006672 // ceramide metabolic process // traceable author statement /// 0006687 // glycosphingolipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005764 // lysosome // inferred from electronic annotation /// 0043202 // lysosomal lumen // traceable author statement","0003824 // catalytic activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017040 // ceramidase activity // traceable author statement /// 0017040 // ceramidase activity // inferred from electronic annotation","chr8:17913807-17942453 (-) // 92.5 // p22"]
["11718364_a_at",0.31028795,0.3270626,0.14104033,-0.14103985,-0.15960455,-0.2097249,0.0036138936,0.0023968115,1.3468478,0.42958674,1.3468478,"up","ST6GALNAC6",30815,"0001574 // ganglioside biosynthetic process // inferred from sequence or structural similarity /// 0001574 // ganglioside biosynthetic process // inferred from electronic annotation /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006677 // glycosylceramide metabolic process // inferred from direct assay /// 0006687 // glycosphingolipid metabolic process // inferred from direct assay /// 0009100 // glycoprotein metabolic process // inferred from direct assay /// 0009312 // oligosaccharide biosynthetic process // inferred from sequence or structural similarity /// 0009312 // oligosaccharide biosynthetic process // inferred from electronic annotation /// 0009988 // cell-cell recognition // inferred by curator","0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030173 // integral to Golgi membrane // inferred from electronic annotation","0001665 // alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity // inferred from sequence or structural similarity /// 0001665 // alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity // inferred from electronic annotation /// 0008373 // sialyltransferase activity // inferred from direct assay /// 0008373 // sialyltransferase activity // inferred from sequence or structural similarity /// 0008373 // sialyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr9:130647600-130661927 (-) // 91.22 // q34.11"]
["11746371_a_at",-0.27153778,-0.48234177,-0.36530304,0.43983746,0.3852024,0.27153778,0.00171664,0.0007141577,-1.6685405,-0.7385867,1.6685405,"down","AASDHPPT",60496,"0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0009059 // macromolecule biosynthetic process // inferred from electronic annotation /// 0015939 // pantothenate metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000287 // magnesium ion binding // inferred from direct assay /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008897 // holo-[acyl-carrier-protein] synthase activity // inferred from direct assay /// 0008897 // holo-[acyl-carrier-protein] synthase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:105948291-105968538 (+) // 78.69 // q22.3"]
["11719333_a_at",0.22457218,0.24146366,0.2846279,-0.36909056,-0.22457218,-0.30108738,0.001213793,0.00026953086,1.4625351,0.54847133,1.4625351,"up","DMKN",93099,"","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","","chr19:35988121-36004560 (-) // 88.95 // q13.12"]
["11728727_at",0.14970112,0.17096329,0.22374392,-0.4165516,-0.14970112,-0.16420269,0.010399346,0.008943796,1.3425303,0.4249546,1.3425303,"up","CEACAM7",1087,"","0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0031225 // anchored to membrane // inferred from electronic annotation","","chr19:42177596-42192206 (-) // 42.96 // q13.2"]
["11759092_at",-0.45109463,-0.3171959,-0.28975582,0.29392052,0.28975582,0.40089512,0.0013628498,0.00038338048,-1.603109,-0.68087256,1.603109,"down","USP12",219333,"0006464 // cellular protein modification process // non-traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0016579 // protein deubiquitination // inferred from direct assay","","0004197 // cysteine-type endopeptidase activity // inferred from mutant phenotype /// 0004221 // ubiquitin thiolesterase activity // inferred from direct assay /// 0004221 // ubiquitin thiolesterase activity // traceable author statement /// 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr13:27640292-27746029 (-) // 88.39 // q12.13"]
["11728793_s_at",-0.2516718,-0.3805647,-0.2538042,0.2873392,0.36790657,0.2516718,0.0013760548,0.00039997842,-1.5132525,-0.59765273,1.5132525,"down","EEF2K",29904,"0006414 // translational elongation // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0031952 // regulation of protein autophosphorylation // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay","0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004686 // elongation factor-2 kinase activity // inferred from direct assay /// 0004686 // elongation factor-2 kinase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from direct assay /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr16:22217441-22300053 (+) // 72.42 // p12.2"]
["11754137_a_at",0.33277845,0.42366934,0.34528112,-0.68988943,-0.33277845,-0.4275732,0.0026275173,0.0015332842,1.8033215,0.8506566,1.8033215,"up","QKI",9444,"0001570 // vasculogenesis // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008366 // axon ensheathment // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation /// 0042692 // muscle cell differentiation // inferred from electronic annotation /// 0042759 // long-chain fatty acid biosynthetic process // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation","chr6:163835665-163991779 (+) // 83.07 // q26"]
["11758031_s_at",0.4599681,0.35289,0.15830183,-0.18535995,-0.18740463,-0.15830183,0.0061956346,0.004866855,1.4149412,0.50074214,1.4149412,"up","BHLHE41",79365,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0008283 // cell proliferation // non-traceable author statement /// 0009887 // organ morphogenesis // non-traceable author statement /// 0010832 // negative regulation of myotube differentiation // inferred from sequence or structural similarity /// 0010832 // negative regulation of myotube differentiation // inferred from electronic annotation /// 0010944 // negative regulation of transcription by competitive promoter binding // inferred from sequence or structural similarity /// 0010944 // negative regulation of transcription by competitive promoter binding // inferred from electronic annotation /// 0030154 // cell differentiation // non-traceable author statement /// 0032922 // circadian regulation of gene expression // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from sequence or structural similarity /// 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from electronic annotation /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from sequence or structural similarity /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from electronic annotation /// 0001102 // RNA polymerase II activating transcription factor binding // inferred from sequence or structural similarity /// 0001102 // RNA polymerase II activating transcription factor binding // inferred from electronic annotation /// 0001191 // RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription // inferred from sequence or structural similarity /// 0001191 // RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from sequence or structural similarity /// 0042826 // histone deacetylase binding // inferred from electronic annotation /// 0043425 // bHLH transcription factor binding // inferred from physical interaction /// 0043425 // bHLH transcription factor binding // inferred from sequence or structural similarity /// 0043425 // bHLH transcription factor binding // inferred from electronic annotation /// 0043426 // MRF binding // inferred from sequence or structural similarity /// 0043426 // MRF binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from sequence or structural similarity /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0070888 // E-box binding // inferred from direct assay /// 0070888 // E-box binding // inferred from sequence or structural similarity /// 0070888 // E-box binding // inferred from electronic annotation","chr12:26273346-26273796 (-) // 94.24 // p12.1"]
["11725395_at",-0.18734169,-0.29198837,-0.26784468,0.71520233,0.24468565,0.18734121,0.021989726,0.020644963,-1.5491405,-0.63146794,1.5491405,"down","TWISTNB",221830,"0006351 // transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay","0003899 // DNA-directed RNA polymerase activity // inferred from electronic annotation","chr7:19735084-19748710 (-) // 82.34 // p21.1"]
["11727905_a_at",-0.30259418,-0.19931316,-0.2842512,0.23756981,0.2998371,0.19931316,0.0012361597,0.00030132057,-1.4217091,-0.50762624,1.4217091,"down","IL13RA1",3597,"0007166 // cell surface receptor signaling pathway // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005898 // interleukin-13 receptor complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004896 // cytokine receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chrX:117861257-117928929 (+) // 91.26 // q24"]
["11722911_at",0.2929845,0.21875858,0.2712469,-0.21875858,-0.30698967,-0.2454009,0.0008942897,0.00011043223,1.4320148,0.5180464,1.4320148,"up","USP13",8975,"0006355 // regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0010506 // regulation of autophagy // inferred from direct assay /// 0030318 // melanocyte differentiation // traceable author statement /// 0050821 // protein stabilization // inferred from direct assay /// 0070536 // protein K63-linked deubiquitination // inferred from direct assay","","0004197 // cysteine-type endopeptidase activity // inferred from mutant phenotype /// 0004197 // cysteine-type endopeptidase activity // traceable author statement /// 0004221 // ubiquitin thiolesterase activity // inferred from direct assay /// 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0004843 // ubiquitin-specific protease activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0008242 // omega peptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0043130 // ubiquitin binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:179370497-179507189 (+) // 83.41 // q26.33"]
["11719002_at",0.23732662,0.25997066,0.23077106,-0.23077106,-0.32516384,-0.2951517,0.00070557836,5.5786673e-5,1.4403156,0.526385,1.4403156,"up","KDELR3",11015,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006396 // RNA processing // traceable author statement /// 0006621 // protein retention in ER lumen // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0033148 // positive regulation of intracellular estrogen receptor signaling pathway // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 2001014 // regulation of skeletal muscle cell differentiation // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0003724 // RNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0008186 // RNA-dependent ATPase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030331 // estrogen receptor binding // inferred from direct assay /// 0046923 // ER retention sequence binding // inferred from electronic annotation","chr22:38864066-38879445 (+) // 95.88 // q13.1"]
["11733946_at",-0.55281925,-0.5038185,-0.44676495,0.44676495,0.5172472,0.5042696,0.0005464768,1.2239901e-5,-1.9869581,-0.9905615,1.9869581,"down","RAP2B",5912,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0031954 // positive regulation of protein autophosphorylation // inferred from electronic annotation /// 0032486 // Rap protein signal transduction // inferred from sequence or structural similarity /// 0032486 // Rap protein signal transduction // inferred from electronic annotation /// 0061097 // regulation of protein tyrosine kinase activity // inferred from sequence or structural similarity /// 0061097 // regulation of protein tyrosine kinase activity // inferred from electronic annotation","0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from sequence or structural similarity /// 0055038 // recycling endosome membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0005525 // GTP binding // traceable author statement /// 0019904 // protein domain specific binding // inferred from electronic annotation","chr3:152880014-152886977 (+) // 94.06 // q25.2"]
["11744648_s_at",0.16259766,0.18005753,0.17527962,-0.2481842,-0.23752594,-0.16259766,0.0009735221,0.00014387535,1.3092563,0.3887475,1.3092563,"up","AIFM2",84883,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006917 // induction of apoptosis // inferred from mutant phenotype /// 0008637 // apoptotic mitochondrial changes // non-traceable author statement /// 0030261 // chromosome condensation // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005811 // lipid particle // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0004174 // electron-transferring-flavoprotein dehydrogenase activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from direct assay /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation","chr10:71873735-71892690 (-) // 95.53 // q22.1"]
["11757141_s_at",-0.1699009,-0.22678757,-0.17999649,0.1699009,0.29947758,0.19419289,0.0016760693,0.0006815215,-1.3318381,-0.41341877,1.3318381,"down","SNORA32","100302240 /// 654320 /// 677792 /// 677805 /// 677822 /// 684959 /// 692063 /// 692072 /// 79101","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr11:93463682-93463812 (-) // 97.01 // q21"]
["11753434_a_at",-0.38970852,-0.4668541,-0.4977646,0.45662785,0.38970852,0.4519186,0.0005783946,2.1733033e-5,-1.8457332,-0.884194,1.8457332,"down","SLC3A2",6520,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006816 // calcium ion transport // non-traceable author statement /// 0006865 // amino acid transport // traceable author statement /// 0006865 // amino acid transport // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0015804 // neutral amino acid transport // inferred from electronic annotation /// 0015827 // tryptophan transport // inferred from sequence or structural similarity /// 0016049 // cell growth // non-traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0060356 // leucine import // inferred from sequence or structural similarity /// 0060356 // leucine import // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0005432 // calcium:sodium antiporter activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0015175 // neutral amino acid transmembrane transporter activity // inferred from sequence or structural similarity /// 0015175 // neutral amino acid transmembrane transporter activity // inferred from electronic annotation /// 0043169 // cation binding // inferred from electronic annotation","chr11:62648365-62652110 (+) // 100.0 // q12.3"]
["11728802_a_at",0.31976032,0.17105389,0.2564373,-0.19926739,-0.20147038,-0.17105389,0.0015673926,0.0005727516,1.3563044,0.43968105,1.3563044,"up","PAPD5",64282,"0006260 // DNA replication // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0071044 // histone mRNA catabolic process // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003887 // DNA-directed DNA polymerase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:50186828-50269217 (+) // 95.57 // q12.1"]
["11755887_a_at",0.39941978,0.27694035,0.2866459,-0.33791924,-0.27694035,-0.4976864,0.0018305046,0.00083498046,1.6153543,0.69185066,1.6153543,"up","MTMR12",54545,"0016311 // dephosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0016791 // phosphatase activity // inferred from electronic annotation","chr5:32229748-32313075 (-) // 98.33 // p13.3"]
["11743550_at",-0.2595291,-0.29797506,-0.21205044,0.22008038,0.21299458,0.21205044,0.0006943628,4.6367102e-5,-1.386608,-0.47156,1.386608,"down","BRWD1",54014,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0008360 // regulation of cell shape // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","","chr21:40668362-40685745 (-) // 87.91 // q22.2"]
["11724885_at",0.6762619,0.41635895,0.317585,-0.317585,-0.44655323,-0.50849724,0.0029209414,0.0017786751,1.8586826,0.89428043,1.8586826,"up","CLIC3",9022,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from mutant phenotype /// 0006821 // chloride transport // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0034707 // chloride channel complex // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005247 // voltage-gated chloride channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from mutant phenotype /// 0005254 // chloride channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr9:139889082-139891017 (-) // 91.69 // q34.3"]
["11729773_a_at",0.16053677,0.12240791,0.1486783,-0.12240744,-0.43129015,-0.32620478,0.010209414,0.008745274,1.3539506,0.4371751,1.3539506,"up","PPEF1",5475,"0006470 // protein dephosphorylation // traceable author statement /// 0050906 // detection of stimulus involved in sensory perception // inferred from electronic annotation","","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // traceable author statement /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:18694028-18846077 (+) // 99.97 // p22.13"]
["11757141_s_at",-0.1699009,-0.22678757,-0.17999649,0.1699009,0.29947758,0.19419289,0.0016760693,0.0006815215,-1.3318381,-0.41341877,1.3318381,"down","SNORA40","100302240 /// 654320 /// 677792 /// 677805 /// 677822 /// 684959 /// 692063 /// 692072 /// 79101","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr11:93463682-93463812 (-) // 97.01 // q21"]
["11751265_x_at",0.3591776,0.2609234,0.14309406,-0.14309406,-0.22533894,-0.22319698,0.0039325557,0.002678954,1.367564,0.45160836,1.367564,"up","PTOV1",53635,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","","chr19:50354010-50363996 (+) // 99.93 // q13.33"]
["11727988_a_at",-0.34394264,-0.28330994,-0.19122314,0.21299934,0.28734112,0.19122314,0.001685117,0.00069015776,-1.4174978,-0.50334644,1.4174978,"down","SCML1",6322,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement","chrX:17755594-17773105 (+) // 97.33 // p22.13"]
["11746843_a_at",0.20528126,0.25964975,0.2502699,-0.336586,-0.37548542,-0.20528173,0.001550606,0.0005515692,1.458196,0.5441847,1.458196,"up","ABI2",10152,"0006928 // cellular component movement // inferred from direct assay /// 0007010 // cytoskeleton organization // traceable author statement /// 0007611 // learning or memory // inferred from electronic annotation /// 0008154 // actin polymerization or depolymerization // non-traceable author statement /// 0016358 // dendrite development // inferred from electronic annotation /// 0016477 // cell migration // traceable author statement /// 0016477 // cell migration // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0043010 // camera-type eye development // inferred from electronic annotation","0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from direct assay /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030175 // filopodium // inferred from direct assay /// 0030175 // filopodium // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0008093 // cytoskeletal adaptor activity // traceable author statement /// 0017124 // SH3 domain binding // inferred from physical interaction /// 0017124 // SH3 domain binding // traceable author statement /// 0019900 // kinase binding // non-traceable author statement /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0070064 // proline-rich region binding // inferred from physical interaction","chr2:204193121-204292475 (+) // 94.57 // q33.2"]
["11733840_a_at",0.15125847,0.23187304,0.19087219,-0.3687935,-0.1976614,-0.15125847,0.0048918244,0.0035666921,1.3477682,0.43057233,1.3477682,"up","ABHD2",11057,"0009611 // response to wounding // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0004091 // carboxylesterase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr15:89631380-89745591 (+) // 88.98 // q26.1"]
["11749777_s_at",0.30136108,0.18401432,0.1418848,-0.1418848,-0.20270061,-0.1758194,0.002796706,0.0016717606,1.3036486,0.382555,1.3036486,"up","TRIM16","10626 /// 147166","0032526 // response to retinoic acid // inferred from expression pattern /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0043967 // histone H4 acetylation // inferred from direct assay /// 0045618 // positive regulation of keratinocyte differentiation // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0046683 // response to organophosphorus // inferred from expression pattern /// 0048386 // positive regulation of retinoic acid receptor signaling pathway // inferred from direct assay /// 0050718 // positive regulation of interleukin-1 beta secretion // inferred from mutant phenotype /// 0060416 // response to growth hormone stimulus // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016605 // PML body // inferred from direct assay","0003677 // DNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019966 // interleukin-1 binding // inferred from physical interaction /// 0032089 // NACHT domain binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:18601310-18638980 (+) // 98.56 // p11.2 /// chr17:15531721-15587619 (-) // 96.24 // p12"]
["11734716_at",-0.36107063,-0.28455973,-0.31149054,0.30991983,0.4524274,0.28455973,0.0012361597,0.0003000335,-1.588879,-0.6680093,1.588879,"down","CBLL1",79872,"0007162 // negative regulation of cell adhesion // inferred from sequence or structural similarity /// 0007162 // negative regulation of cell adhesion // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from sequence or structural similarity /// 0016567 // protein ubiquitination // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from sequence or structural similarity /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0045807 // positive regulation of endocytosis // inferred from sequence or structural similarity /// 0045807 // positive regulation of endocytosis // inferred from electronic annotation","0000151 // ubiquitin ligase complex // inferred by curator /// 0005622 // intracellular // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from sequence or structural similarity /// 0004842 // ubiquitin-protein ligase activity // traceable author statement /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:107384228-107402111 (+) // 99.38 // q22.3"]
["11718566_s_at",-0.48317242,-0.29908037,-0.13743019,0.21122742,0.22395468,0.13743019,0.010089653,0.008596617,-1.4116982,-0.49743176,1.4116982,"down","KIAA1147",57189,"","","","chr7:141356342-141402195 (-) // 96.1 // q34"]
["11736170_a_at",0.21927643,0.2592783,0.17824268,-0.17824268,-0.300272,-0.2682972,0.001395873,0.000419132,1.3830658,0.46786976,1.3830658,"up","MTMR2",8898,"0002091 // negative regulation of receptor internalization // inferred from sequence or structural similarity /// 0002091 // negative regulation of receptor internalization // inferred from electronic annotation /// 0006470 // protein dephosphorylation // non-traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0045806 // negative regulation of endocytosis // inferred from sequence or structural similarity /// 0045806 // negative regulation of endocytosis // inferred from electronic annotation /// 0046855 // inositol phosphate dephosphorylation // inferred from electronic annotation /// 0046856 // phosphatidylinositol dephosphorylation // inferred from electronic annotation /// 0051262 // protein tetramerization // inferred from electronic annotation /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from electronic annotation /// 0090394 // negative regulation of excitatory postsynaptic membrane potential // inferred from sequence or structural similarity /// 0097062 // dendritic spine maintenance // inferred from sequence or structural similarity /// 2000643 // positive regulation of early endosome to late endosome transport // inferred from sequence or structural similarity /// 2000645 // negative regulation of receptor catabolic process // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005774 // vacuolar membrane // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from sequence or structural similarity /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from sequence or structural similarity /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030424 // axon // inferred from sequence or structural similarity /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from sequence or structural similarity /// 0043197 // dendritic spine // inferred from electronic annotation /// 0097060 // synaptic membrane // inferred from sequence or structural similarity","0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // non-traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr11:95566045-95657459 (-) // 90.3 // q21"]
["11754753_a_at",-0.36856937,-0.3245659,-0.29478645,0.39483547,0.4761324,0.29478645,0.0011259156,0.0002233526,-1.6447769,-0.717892,1.6447769,"down","SCAF11",9169,"0000245 // spliceosomal complex assembly // inferred from direct assay /// 0000375 // RNA splicing, via transesterification reactions // inferred from direct assay /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from direct assay /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:46315192-46323748 (-) // 87.15 // q12"]
["11729711_at",-0.49337006,-0.54974794,-0.4334097,0.4551549,0.6253238,0.43341017,0.00096791046,0.00013614689,-1.9955765,-0.99680555,1.9955765,"down","MARS2",92935,"0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006418 // tRNA aminoacylation for protein translation // inferred from electronic annotation /// 0006431 // methionyl-tRNA aminoacylation // inferred from direct assay /// 0006431 // methionyl-tRNA aminoacylation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from direct assay /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004825 // methionine-tRNA ligase activity // inferred from direct assay /// 0004825 // methionine-tRNA ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation","chr2:198570027-198573114 (+) // 98.62 // q33.1"]
["11726139_at",-0.18028784,-0.18377113,-0.24310017,0.26731586,0.26377583,0.18028784,0.0011428653,0.0002310908,-1.3561463,-0.4395129,1.3561463,"down","MTMR9",66036,"0016311 // dephosphorylation // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0030234 // enzyme regulator activity // inferred from electronic annotation","chr8:11141999-11185655 (+) // 90.89 // p23.1"]
["11733727_s_at",0.6178632,0.6397171,0.4899702,-0.8052316,-0.4899702,-0.6893902,0.001213793,0.00027191787,2.3686213,1.2440475,2.3686213,"up","SNAP25",6616,"0001504 // neurotransmitter uptake // non-traceable author statement /// 0006112 // energy reserve metabolic process // traceable author statement /// 0007268 // synaptic transmission // non-traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // non-traceable author statement /// 0007269 // neurotransmitter secretion // traceable author statement /// 0007269 // neurotransmitter secretion // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007616 // long-term memory // inferred from electronic annotation /// 0014047 // glutamate secretion // traceable author statement /// 0016081 // synaptic vesicle docking involved in exocytosis // non-traceable author statement /// 0016197 // endosomal transport // inferred from electronic annotation /// 0030252 // growth hormone secretion // inferred from electronic annotation /// 0030431 // sleep // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046887 // positive regulation of hormone secretion // inferred from electronic annotation /// 0048791 // calcium ion-dependent exocytosis of neurotransmitter // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // traceable author statement /// 0051963 // regulation of synapse assembly // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008076 // voltage-gated potassium channel complex // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030426 // growth cone // inferred from sequence or structural similarity /// 0030426 // growth cone // inferred from electronic annotation /// 0031201 // SNARE complex // inferred from sequence or structural similarity /// 0031201 // SNARE complex // inferred from electronic annotation /// 0043005 // neuron projection // inferred from sequence or structural similarity /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043229 // intracellular organelle // inferred from electronic annotation /// 0044295 // axonal growth cone // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070032 // synaptobrevin 2-SNAP-25-syntaxin-1a-complexin I complex // inferred from electronic annotation /// 0070044 // synaptobrevin 2-SNAP-25-syntaxin-1a complex // inferred from electronic annotation","0000149 // SNARE binding // inferred from electronic annotation /// 0005249 // voltage-gated potassium channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017022 // myosin binding // inferred from electronic annotation /// 0017075 // syntaxin-1 binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from electronic annotation","chr20:10199473-10288065 (+) // 94.92 // p12.2"]
["11754735_s_at",0.44936275,0.49691248,0.59963703,-0.44936275,-0.50257635,-0.50231075,0.0006217929,3.0701834e-5,2.0000749,1.000054,2.0000749,"up","ABCA13",154664,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr7:48494659-48687092 (+) // 89.87 // p12.3"]
["11760602_s_at",0.33637667,0.18001318,0.23358917,-0.22214794,-0.23984766,-0.18001318,0.0017052562,0.0007042811,1.379357,0.46399593,1.379357,"up","LINC00337",148645,"","","","chr1:6297711-6299479 (+) // 65.73 // p36.31"]
["11724967_at",0.31697607,0.18071365,0.32742262,-0.23026705,-0.21534872,-0.18071365,0.001612635,0.00061324576,1.3984357,0.4838139,1.3984357,"up","USP31",57478,"0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation","","0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr16:23072728-23160591 (-) // 95.88 // p12.2"]
["11718841_s_at",-0.40160275,-0.36822224,-0.27721405,0.27721405,0.28001642,0.3894601,0.0011259156,0.00022286079,-1.5851029,-0.66457653,1.5851029,"down","IL8",3576,"0001525 // angiogenesis // traceable author statement /// 0002237 // response to molecule of bacterial origin // inferred from direct assay /// 0006928 // cellular component movement // traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0019722 // calcium-mediated signaling // traceable author statement /// 0030155 // regulation of cell adhesion // inferred from direct assay /// 0030593 // neutrophil chemotaxis // inferred from genetic interaction /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0031623 // receptor internalization // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0042119 // neutrophil activation // traceable author statement /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from expression pattern /// 0045091 // regulation of retroviral genome replication // inferred from direct assay /// 0045744 // negative regulation of G-protein coupled receptor protein signaling pathway // inferred from direct assay /// 0048566 // embryonic digestive tract development // inferred from expression pattern /// 0050930 // induction of positive chemotaxis // inferred from genetic interaction /// 0071222 // cellular response to lipopolysaccharide // inferred from direct assay /// 0071347 // cellular response to interleukin-1 // inferred from expression pattern /// 0071356 // cellular response to tumor necrosis factor // inferred from expression pattern /// 0090023 // positive regulation of neutrophil chemotaxis // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005622 // intracellular // inferred from direct assay","0005125 // cytokine activity // inferred from electronic annotation /// 0005153 // interleukin-8 receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008009 // chemokine activity // inferred from electronic annotation /// 0008009 // chemokine activity // traceable author statement","chr4:74606222-74609433 (+) // 67.34 // q13.3"]
["11722737_at",0.1631136,0.18090343,0.19041634,-0.34686613,-0.1631136,-0.3396163,0.0027040783,0.0015989231,1.3768231,0.46134314,1.3768231,"up","APPL1",26060,"0006915 // apoptotic process // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0008283 // cell proliferation // inferred from direct assay /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0046324 // regulation of glucose import // inferred from mutant phenotype /// 0090003 // regulation of establishment of protein localization in plasma membrane // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred by curator /// 0005768 // endosome // inferred from electronic annotation /// 0005792 // microsome // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0010008 // endosome membrane // inferred from direct assay /// 0010008 // endosome membrane // traceable author statement /// 0012506 // vesicle membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016581 // NuRD complex // inferred from direct assay /// 0031901 // early endosome membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0043422 // protein kinase B binding // inferred from physical interaction","chr3:57261764-57307486 (+) // 93.19 // p14.3"]
["11748065_a_at",0.18893337,0.18936348,0.20319176,-0.18893337,-0.56087303,-0.28098106,0.0101254685,0.008641497,1.4513801,0.5374254,1.4513801,"up","LRRC49",54839,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation","","chr15:71184781-71342410 (+) // 95.01 // q23"]
["11741535_a_at",-0.4128914,-0.5428314,-0.47955036,0.48019695,0.6362333,0.4128914,0.001091852,0.00020235096,-1.9837061,-0.9881983,1.9837061,"down","TMEM2",23670,"0007275 // multicellular organismal development // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","","chr9:74298282-74383800 (-) // 98.24 // q21.13"]
["11721822_a_at",0.31796932,0.28362942,0.3100443,-0.6133809,-0.29934454,-0.28362942,0.004135986,0.002869419,1.6275095,0.702666,1.6275095,"up","FSD1",79187,"0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation","","chr19:4304590-4323835 (+) // 94.71 // p13.3"]
["11717186_a_at",-0.21491909,-0.2658348,-0.20124912,0.2063694,0.20124912,0.22709084,0.0006217929,3.203251e-5,-1.3555743,-0.4389041,1.3555743,"down","MEF2D",4209,"0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001958 // endochondral ossification // inferred from electronic annotation /// 0002062 // chondrocyte differentiation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007512 // adult heart development // inferred from expression pattern /// 0007517 // muscle organ development // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from direct assay /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from electronic annotation /// 0033613 // activating transcription factor binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr1:156433518-156470529 (-) // 92.07 // q22"]
["11756203_x_at",-0.17360687,-0.19999504,-0.22470665,0.1805172,0.17360687,0.19075966,0.00055139343,1.6549151e-5,-1.3023021,-0.38106412,1.3023021,"down","KIAA1143",57456,"","","","chr14:32736471-32737355 (-) // 42.33 // q12 /// chr3:44790237-44791121 (-) // 42.89 // p21.31"]
["11755143_a_at",0.23241997,0.23767233,0.17586088,-0.29822874,-0.35461235,-0.17586088,0.0019491622,0.00095120975,1.4059563,0.49155173,1.4059563,"up","BNC2",54796,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:16418578-16870841 (-) // 92.57 // p22.3"]
["11717892_a_at",-0.45311546,-0.32944775,-0.44622612,0.37657166,0.4286251,0.32944775,0.00084399927,8.9642934e-5,-1.7264533,-0.7878113,1.7264533,"down","PTP4A1",7803,"0006470 // protein dephosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // non-traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009898 // internal side of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // non-traceable author statement /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr6:64281916-64293491 (+) // 94.31 // q12"]
["11718217_at",-0.23341084,-0.22374678,-0.40401363,0.28169203,0.24986601,0.2237463,0.0019051586,0.00090070756,-1.452789,-0.53882515,1.452789,"down","RAB22A",57403,"0006184 // GTP catabolic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from direct assay /// 0007032 // endosome organization // inferred from expression pattern /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation","chr20:56884751-56942563 (+) // 88.45 // q13.32"]
["11756581_s_at",-0.20183563,-0.23518276,-0.27251816,0.25412846,0.20558834,0.20183468,0.00073653937,6.5977685e-5,-1.3727124,-0.45702934,1.3727124,"down","PRSS23",11098,"0006508 // proteolysis // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr11:86511574-86519837 (+) // 96.59 // q14.2"]
["11748843_a_at",0.27914143,0.3082118,0.26868057,-0.33411694,-0.3179536,-0.26868057,0.0005464768,1.3414806e-5,1.5076083,0.5922617,1.5076083,"up","USP42",84132,"0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016579 // protein deubiquitination // inferred from sequence or structural similarity /// 0016579 // protein deubiquitination // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","","0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr7:6144580-6185206 (+) // 91.67 // p22.1"]
["11730936_s_at",-0.28051996,-0.4154501,-0.29695702,0.28097343,0.28051996,0.3265047,0.0010000851,0.00015601984,-1.5443236,-0.62697506,1.5443236,"down","AKNA",80709,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr9:117094678-117160783 (-) // 80.05 // q32"]
["11736664_a_at",-0.2190299,-0.42790318,-0.33479452,0.23637629,0.28072214,0.2190299,0.0018126566,0.0008196768,-1.4872205,-0.5726186,1.4872205,"down","JDP2",122953,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr14:75898002-75939402 (+) // 74.95 // q24.3"]
["11719833_at",-0.381536,-0.26964474,-0.33188295,0.27205372,0.32996225,0.26964474,0.00081446936,8.266009e-5,-1.535003,-0.6182414,1.535003,"down","MPZL2",10205,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // traceable author statement /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation","0005856 // cytoskeleton // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr11:118124133-118135251 (-) // 97.94 // q23.3"]
["11718236_s_at",-0.125916,-0.13405323,-0.16112089,0.35588646,0.47762012,0.12591648,0.012723735,0.0113428645,-1.3757049,-0.46017104,1.3757049,"down","PRPF4B",8899,"0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr6:4021436-4065217 (+) // 97.83 // p25.2"]
["11722415_a_at",-0.2525363,-0.25023794,-0.18775606,0.37654734,0.21560144,0.18775606,0.0025138857,0.0014323302,-1.4045861,-0.49014503,1.4045861,"down","HBS1L",10767,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006414 // translational elongation // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement","","0000166 // nucleotide binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0005525 // GTP binding // traceable author statement","chr6:135281522-135376036 (-) // 81.08 // q23.3"]
["11743774_a_at",0.38610172,0.1846137,0.23528862,-0.1860609,-0.26817465,-0.18461418,0.0030939924,0.0019307472,1.3963087,0.48161793,1.3963087,"up","LZTFL1",54585,"","","","chr3:45865444-45883658 (-) // 98.44 // p21.31"]
["11726258_at",-0.21557188,-0.21847868,-0.2694502,0.7274828,0.41316938,0.2155714,0.0116416365,0.0102227805,-1.6094579,-0.68657476,1.6094579,"down","RNF141",50862,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","","0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:10533221-10562778 (-) // 89.14 // p15.4"]
["11754389_x_at",-0.85937977,-0.81813145,-0.86443186,0.93425846,0.8424969,0.81813145,0.00031084043,1.4930907e-6,-3.2767751,-1.7122767,3.2767751,"down","LRRC57",255252,"","","","chr15:42834721-42841000 (-) // 76.59 // q15.2"]
["11742720_at",-0.23068905,-0.20067215,-0.22309113,0.20067215,0.24909306,0.20720005,0.00055139343,1.5752716e-5,-1.3539169,-0.4371392,1.3539169,"down","LRRC58",116064,"","","","chr3:120043318-120068214 (-) // 81.65 // q13.33"]
["11755281_a_at",0.3382969,0.1703062,0.21272182,-0.1703062,-0.21583843,-0.19461346,0.0021648712,0.0011365107,1.351,0.43402767,1.351,"up","TGFBI","100652886 /// 100653157 /// 7045","0001525 // angiogenesis // inferred from expression pattern /// 0002062 // chondrocyte differentiation // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007162 // negative regulation of cell adhesion // traceable author statement /// 0007601 // visual perception // inferred from electronic annotation /// 0007601 // visual perception // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity","0005178 // integrin binding // traceable author statement /// 0050840 // extracellular matrix binding // inferred from electronic annotation","chr5:135364675-135399097 (+) // 92.98 // q31.1"]
["11715946_a_at",0.39034653,0.3016882,0.2959442,-0.2959442,-0.6028242,-0.5528679,0.0022762846,0.0012371538,1.7571107,0.81320506,1.7571107,"up","RALB",5899,"0000910 // cytokinesis // inferred from direct assay /// 0001928 // regulation of exocyst assembly // inferred from sequence or structural similarity /// 0001928 // regulation of exocyst assembly // inferred from electronic annotation /// 0006184 // GTP catabolic process // inferred from direct assay /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0060178 // regulation of exocyst localization // inferred from sequence or structural similarity /// 0060178 // regulation of exocyst localization // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from electronic annotation /// 0005525 // GTP binding // traceable author statement","chr2:121010333-121052286 (+) // 98.61 // q14.2"]
["11745300_a_at",0.22129774,0.26070166,0.25214148,-0.58287907,-0.22129774,-0.42938232,0.00471877,0.0034019037,1.5755986,0.6559,1.5755986,"up","DNAJC6",9829,"0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0016044 // cellular membrane organization // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005829 // cytosol // traceable author statement","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0031072 // heat shock protein binding // inferred from electronic annotation","chr1:65775217-65880952 (+) // 98.34 // p31.3"]
["11741356_a_at",0.24642467,0.18739033,0.20532131,-0.1873908,-0.4796009,-0.555316,0.0068259444,0.005450173,1.537388,0.6204813,1.537388,"up","FNDC3A",22862,"0007286 // spermatid development // inferred from electronic annotation /// 0009566 // fertilization // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0060009 // Sertoli cell development // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0012506 // vesicle membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042598 // vesicular fraction // inferred from electronic annotation","","chr13:49684437-49783915 (+) // 97.91 // q14.2"]
["11756872_a_at",0.21293259,0.24456882,0.2662387,-0.4467368,-0.21293259,-0.5565748,0.0045292554,0.003228216,1.5655411,0.6466614,1.5655411,"up","SAMD4A",23034,"0006417 // regulation of translation // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from direct assay /// 0045727 // positive regulation of translation // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0030371 // translation repressor activity // inferred from direct assay","chr14:55241679-55255846 (+) // 98.75 // q22.2"]
["11759854_x_at",-0.14513111,-0.18584967,-0.15153933,0.31898403,0.3233409,0.14513111,0.0033264575,0.002133116,-1.341015,-0.4233254,1.341015,"down","RPS27A",6233,"0000075 // cell cycle checkpoint // traceable author statement /// 0000080 // G1 phase of mitotic cell cycle // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000187 // activation of MAPK activity // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006916 // anti-apoptosis // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007220 // Notch receptor processing // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0007254 // JNK cascade // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016044 // cellular membrane organization // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016197 // endosomal transport // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0046788 // egress of virus within host cell // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // traceable author statement /// 0015935 // small ribosomal subunit // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement","0003735 // structural constituent of ribosome // inferred from direct assay /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:55459771-55462745 (+) // 79.84 // p16.1"]
["11721699_a_at",0.22044563,0.16294146,0.21517849,-0.16294098,-0.26400375,-0.34665012,0.002278488,0.0012403139,1.3730525,0.4573868,1.3730525,"up","PMS1",5378,"0006200 // ATP catabolic process // not recorded /// 0006281 // DNA repair // inferred from electronic annotation /// 0006298 // mismatch repair // not recorded /// 0006298 // mismatch repair // inferred from electronic annotation /// 0006298 // mismatch repair // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007131 // reciprocal meiotic recombination // not recorded /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0032300 // mismatch repair complex // not recorded /// 0032389 // MutLalpha complex // not recorded","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // not recorded /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0016887 // ATPase activity // not recorded /// 0030983 // mismatched DNA binding // inferred from electronic annotation /// 0032407 // MutSalpha complex binding // not recorded","chr2:190648810-190742355 (+) // 97.37 // q32.2"]
["11718137_a_at",0.19544792,0.23475075,0.20542145,-0.28317642,-0.1999073,-0.19544792,0.0009735221,0.00014322254,1.3547724,0.43805057,1.3547724,"up","PDXK",8566,"0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0008283 // cell proliferation // inferred from direct assay /// 0009443 // pyridoxal 5'-phosphate salvage // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0042816 // vitamin B6 metabolic process // inferred by curator /// 0042816 // vitamin B6 metabolic process // traceable author statement /// 0042823 // pyridoxal phosphate biosynthetic process // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0008478 // pyridoxal kinase activity // inferred from direct assay /// 0008478 // pyridoxal kinase activity // traceable author statement /// 0008478 // pyridoxal kinase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from direct assay /// 0030955 // potassium ion binding // inferred from direct assay /// 0031402 // sodium ion binding // inferred from direct assay /// 0031403 // lithium ion binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr21:45138994-45182178 (+) // 91.58 // q22.3"]
["11716055_s_at",1.5825624,1.372087,1.4745116,-2.2059553,-1.3720865,-1.8332522,0.0010772275,0.00019092223,9.7145815,3.2801518,9.7145815,"up","STMN3",50861,"0007399 // nervous system development // traceable author statement /// 0031122 // cytoplasmic microtubule organization // inferred from sequence or structural similarity /// 0031122 // cytoplasmic microtubule organization // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0031175 // neuron projection development // inferred from electronic annotation /// 0032314 // regulation of Rac GTPase activity // inferred from sequence or structural similarity /// 0032314 // regulation of Rac GTPase activity // inferred from electronic annotation /// 0035021 // negative regulation of Rac protein signal transduction // inferred from sequence or structural similarity /// 0035021 // negative regulation of Rac protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0051493 // regulation of cytoskeleton organization // inferred from sequence or structural similarity /// 0051493 // regulation of cytoskeleton organization // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0019904 // protein domain specific binding // inferred from sequence or structural similarity /// 0019904 // protein domain specific binding // inferred from electronic annotation","chr20:62271062-62285400 (-) // 86.44 // q13.33"]
["11716230_s_at",-0.14239359,-0.16405344,-0.17347574,0.3577056,0.14239359,0.17530012,0.0060290927,0.0046892944,-1.305957,-0.38510737,1.305957,"down","TMEM167B",56900,"","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:109632424-109639556 (+) // 86.76 // p13.3"]
["11735447_a_at",-0.3542118,-0.24110079,-0.2684822,0.4214487,0.24110126,0.26267576,0.0018462084,0.00084518496,-1.5118763,-0.5963402,1.5118763,"down","FAM18A",780776,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr16:10860532-10912651 (-) // 79.4 // p13.13"]
["11717042_at",-0.53697205,-0.4187832,-0.35696602,0.35696602,0.49465847,0.4797287,0.0010998568,0.00021030854,-1.8421086,-0.88135815,1.8421086,"down","C20orf11",54994,"","0005634 // nucleus // inferred from electronic annotation","","chr20:61569419-61580145 (+) // 96.96 // q13.33"]
["11758151_s_at",0.33529186,0.29099655,0.19927979,-0.19927979,-0.2759447,-0.27573872,0.001350818,0.00037929945,1.4394428,0.52551043,1.4394428,"up","RNASEH2A",10535,"0006260 // DNA replication // traceable author statement /// 0006401 // RNA catabolic process // inferred from direct assay /// 0006401 // RNA catabolic process // traceable author statement /// 0016070 // RNA metabolic process // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0032299 // ribonuclease H2 complex // inferred from direct assay /// 0032299 // ribonuclease H2 complex // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0004523 // ribonuclease H activity // inferred from direct assay /// 0004523 // ribonuclease H activity // inferred from electronic annotation /// 0004540 // ribonuclease activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:12918231-12924302 (+) // 94.96 // p13.2"]
["11731867_a_at",0.13793755,0.18435907,0.12192869,-0.35739422,-0.12192869,-0.30948544,0.0065826094,0.005204854,1.3296175,0.41101122,1.3296175,"up","BICD2",23299,"0006810 // transport // inferred from electronic annotation /// 0072385 // minus-end-directed organelle transport along microtubule // inferred from sequence or structural similarity /// 0072393 // microtubule anchoring at microtubule organizing center // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from sequence or structural similarity","0005515 // protein binding // inferred from physical interaction /// 0017137 // Rab GTPase binding // inferred from sequence or structural similarity","chr9:95473645-95527083 (-) // 98.56 // q22.31"]
["11718230_a_at",0.18271351,0.258049,0.27590847,-0.34714603,-0.18271351,-0.3404789,0.0019608224,0.0009638956,1.4429318,0.52900314,1.4429318,"up","HLA-F",3134,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // inferred from electronic annotation /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002480 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0050776 // regulation of immune response // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0031901 // early endosome membrane // traceable author statement /// 0042612 // MHC class I protein complex // inferred from electronic annotation /// 0071556 // integral to lumenal side of endoplasmic reticulum membrane // traceable author statement","0032393 // MHC class I receptor activity // traceable author statement","chr6:29691060-29694303 (+) // 95.16 // p22.1"]
["11739199_a_at",0.27639103,0.20166111,0.20836353,-0.20166111,-0.21873188,-0.21929741,0.00070557836,5.6046676e-5,1.3585196,0.44203538,1.3585196,"up","TMEM106C",79022,"","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:48357329-48362661 (+) // 94.42 // q13.11"]
["11743923_at",0.194767,0.18173695,0.12644386,-0.12644386,-0.3278203,-0.42752075,0.008553791,0.007117108,1.3770468,0.46157756,1.3770468,"up","TCFL5","100132911 /// 10732","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from expression pattern /// 0007283 // spermatogenesis // inferred from sequence or structural similarity /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from expression pattern /// 0042127 // regulation of cell proliferation // inferred from sequence or structural similarity /// 0045595 // regulation of cell differentiation // inferred from expression pattern /// 0045595 // regulation of cell differentiation // inferred from sequence or structural similarity","0001673 // male germ cell nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:61472365-61493115 (-) // 87.59 // q13.33"]
["11742838_at",0.45020294,0.31670904,0.19834661,-0.25701284,-0.32685757,-0.19834661,0.0032341068,0.0020446463,1.4974334,0.5824919,1.4974334,"up","ARRB1",408,"0002031 // G-protein coupled receptor internalization // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007219 // Notch signaling pathway // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0016567 // protein ubiquitination // inferred from mutant phenotype /// 0030168 // platelet activation // traceable author statement /// 0031397 // negative regulation of protein ubiquitination // inferred from direct assay /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0032715 // negative regulation of interleukin-6 production // inferred from direct assay /// 0032717 // negative regulation of interleukin-8 production // inferred from direct assay /// 0035025 // positive regulation of Rho protein signal transduction // inferred from mutant phenotype /// 0035066 // positive regulation of histone acetylation // inferred from mutant phenotype /// 0043086 // negative regulation of catalytic activity // traceable author statement /// 0043149 // stress fiber assembly // inferred from mutant phenotype /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0043547 // positive regulation of GTPase activity // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0090240 // positive regulation of histone H4 acetylation // inferred from mutant phenotype","0000139 // Golgi membrane // traceable author statement /// 0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005765 // lysosomal membrane // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005834 // heterotrimeric G-protein complex // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0031143 // pseudopodium // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0004402 // histone acetyltransferase activity // inferred from direct assay /// 0004857 // enzyme inhibitor activity // traceable author statement /// 0005096 // GTPase activator activity // inferred from mutant phenotype /// 0005159 // insulin-like growth factor receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0031701 // angiotensin receptor binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from mutant phenotype","chr11:74976173-75062946 (-) // 96.79 // q13.4"]
["11717215_a_at",0.28577328,0.21957684,0.19219589,-0.19219589,-0.24047089,-0.27493,0.0011213787,0.00021732146,1.3835559,0.46838093,1.3835559,"up","ATP9A",10079,"0006812 // cation transport // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0015914 // phospholipid transport // inferred from electronic annotation /// 0045332 // phospholipid translocation // non-traceable author statement","0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0055037 // recycling endosome // inferred from direct assay /// 0055037 // recycling endosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004012 // phospholipid-translocating ATPase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:50212706-50384908 (-) // 96.64 // q13.2"]
["11726521_a_at",0.43546677,0.27099895,0.34144592,-0.36681652,-0.27099848,-0.4301648,0.0014306394,0.00044494102,1.6304804,0.7052971,1.6304804,"up","SPATA17",128153,"","0005737 // cytoplasm // inferred from electronic annotation","0005516 // calmodulin binding // inferred from electronic annotation","chr1:217804665-218040486 (+) // 97.76 // q41"]
["11753906_x_at",0.25974512,0.20811176,0.34962463,-0.25999498,-0.20811129,-0.21373653,0.0013199523,0.0003577859,1.4139928,0.49977475,1.4139928,"up","SMARCA1",6594,"0006338 // chromatin remodeling // inferred from direct assay /// 0006338 // chromatin remodeling // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007420 // brain development // inferred from mutant phenotype /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from sequence or structural similarity /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0043044 // ATP-dependent chromatin remodeling // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0016585 // chromatin remodeling complex // inferred from electronic annotation /// 0016589 // NURF complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0004386 // helicase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008094 // DNA-dependent ATPase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016817 // hydrolase activity, acting on acid anhydrides // inferred from electronic annotation /// 0016818 // hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides // inferred from electronic annotation /// 0031491 // nucleosome binding // inferred from electronic annotation","chrX:128580732-128657382 (-) // 97.27 // q25"]
["11757000_a_at",0.15250778,0.2936344,0.22934628,-0.16757011,-0.17516899,-0.15250778,0.0017035499,0.00070178014,1.310616,0.3902451,1.310616,"up","STYXL1",51657,"0006470 // protein dephosphorylation // not recorded /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0035556 // intracellular signal transduction // traceable author statement","0005622 // intracellular // traceable author statement","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // not recorded /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr7:75625674-75659823 (-) // 99.74 // q11.23"]
["11738060_s_at",0.28587437,0.22888947,0.19921875,-0.24988079,-0.19921875,-0.43047953,0.0032469141,0.0020611333,1.4451178,0.5311872,1.4451178,"up","HIST1H4L","121504 /// 554313 /// 8294 /// 8359 /// 8360 /// 8361 /// 8362 /// 8363 /// 8364 /// 8365 /// 8366 /// 8367 /// 8368 /// 8370","0000723 // telomere maintenance // traceable author statement /// 0006325 // chromatin organization // non-traceable author statement /// 0006334 // nucleosome assembly // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0045653 // negative regulation of megakaryocyte differentiation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement","0000786 // nucleosome // traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26285354-26285727 (-) // 99.47 // p22.2"]
["11750980_a_at",0.2731228,0.30264568,0.27480412,-0.30002832,-0.27312326,-0.32563448,0.00038672079,5.3294852e-6,1.498085,0.5831195,1.498085,"up","ARFGAP3",26286,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // non-traceable author statement /// 0009306 // protein secretion // inferred from expression pattern /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // non-traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0032312 // regulation of ARF GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005622 // intracellular // non-traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0008060 // ARF GTPase activator activity // inferred from direct assay /// 0008060 // ARF GTPase activator activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008565 // protein transporter activity // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr22:43193221-43253268 (-) // 95.96 // q13.2"]
["11738060_s_at",0.28587437,0.22888947,0.19921875,-0.24988079,-0.19921875,-0.43047953,0.0032469141,0.0020611333,1.4451178,0.5311872,1.4451178,"up","HIST1H4K","121504 /// 554313 /// 8294 /// 8359 /// 8360 /// 8361 /// 8362 /// 8363 /// 8364 /// 8365 /// 8366 /// 8367 /// 8368 /// 8370","0000723 // telomere maintenance // traceable author statement /// 0006325 // chromatin organization // non-traceable author statement /// 0006334 // nucleosome assembly // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0045653 // negative regulation of megakaryocyte differentiation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement","0000786 // nucleosome // traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26285354-26285727 (-) // 99.47 // p22.2"]
["11715639_a_at",0.1812725,0.15034103,0.18615627,-0.15034103,-0.1976347,-0.27766514,0.0016010772,0.0006029755,1.3023678,0.3811369,1.3023678,"up","TTC3","286495 /// 7267","0006511 // ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0010771 // negative regulation of cell morphogenesis involved in differentiation // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005773 // vacuole // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr21:38121747-38575408 (+) // 77.26 // q22.13"]
["11743163_at",-0.20874596,-0.18770027,-0.14804459,0.26043415,0.43621635,0.14804459,0.0070709703,0.005685401,-1.3784643,-0.463062,1.3784643,"down","ATF1",466,"0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0008063 // Toll signaling pathway // traceable author statement /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0032025 // response to cobalt ion // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0043623 // cellular protein complex assembly // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr12:51157772-51214924 (+) // 96.87 // q13.12"]
["11736239_a_at",-0.17829227,-0.19601822,-0.16950798,0.29627466,0.32522964,0.16950798,0.0017807181,0.00078072987,-1.3612609,-0.4449436,1.3612609,"down","ABCA5",23461,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0010745 // negative regulation of macrophage derived foam cell differentiation // inferred from sequence or structural similarity /// 0010745 // negative regulation of macrophage derived foam cell differentiation // inferred from electronic annotation /// 0033344 // cholesterol efflux // inferred from sequence or structural similarity /// 0033344 // cholesterol efflux // inferred from electronic annotation /// 0034375 // high-density lipoprotein particle remodeling // inferred from sequence or structural similarity /// 0034375 // high-density lipoprotein particle remodeling // inferred from electronic annotation /// 0043691 // reverse cholesterol transport // inferred by curator","0000139 // Golgi membrane // inferred from electronic annotation /// 0005764 // lysosome // inferred from sequence or structural similarity /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from sequence or structural similarity /// 0005770 // late endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr17:67239944-67323252 (-) // 72.88 // q24.3"]
["11739868_a_at",0.47047663,0.23135757,0.19667625,-0.21065998,-0.19667625,-0.26637268,0.0054514054,0.0041014664,1.4380094,0.5240731,1.4380094,"up","ATF2",1386,"0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0003151 // outflow tract morphogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred by curator /// 0006366 // transcription from RNA polymerase II promoter // inferred by curator /// 0006970 // response to osmotic stress // inferred from direct assay /// 0008063 // Toll signaling pathway // traceable author statement /// 0032915 // positive regulation of transforming growth factor beta2 production // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0060612 // adipose tissue development // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay","0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0001076 // RNA polymerase II transcription factor binding transcription factor activity // inferred by curator /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0001102 // RNA polymerase II activating transcription factor binding // inferred from physical interaction /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred by curator /// 0003713 // transcription coactivator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008140 // cAMP response element binding protein binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0035497 // cAMP response element binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr2:175939007-176032924 (-) // 97.54 // q31.1"]
["11718241_a_at",0.5186243,0.37541914,0.4877696,-0.3803668,-0.37541962,-0.45260048,0.0007367552,6.681752e-5,1.8193208,0.8634,1.8193208,"up","PRUNE2",158471,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from mutant phenotype /// 0051318 // G1 phase // inferred from expression pattern","0005737 // cytoplasm // inferred from electronic annotation","0016462 // pyrophosphatase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:79226292-79521136 (-) // 97.03 // q21.2"]
["11738060_s_at",0.28587437,0.22888947,0.19921875,-0.24988079,-0.19921875,-0.43047953,0.0032469141,0.0020611333,1.4451178,0.5311872,1.4451178,"up","HIST1H4A","121504 /// 554313 /// 8294 /// 8359 /// 8360 /// 8361 /// 8362 /// 8363 /// 8364 /// 8365 /// 8366 /// 8367 /// 8368 /// 8370","0000723 // telomere maintenance // traceable author statement /// 0006325 // chromatin organization // non-traceable author statement /// 0006334 // nucleosome assembly // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0045653 // negative regulation of megakaryocyte differentiation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement","0000786 // nucleosome // traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26285354-26285727 (-) // 99.47 // p22.2"]
["11723494_a_at",-0.1783123,-0.20549345,-0.1576786,0.45442295,0.42858315,0.1576786,0.006706417,0.0053316304,-1.441319,-0.52738965,1.441319,"down","RNF166",115992,"","0005622 // intracellular // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:88762908-88772801 (-) // 89.46 // q24.3"]
["11738060_s_at",0.28587437,0.22888947,0.19921875,-0.24988079,-0.19921875,-0.43047953,0.0032469141,0.0020611333,1.4451178,0.5311872,1.4451178,"up","HIST1H4B","121504 /// 554313 /// 8294 /// 8359 /// 8360 /// 8361 /// 8362 /// 8363 /// 8364 /// 8365 /// 8366 /// 8367 /// 8368 /// 8370","0000723 // telomere maintenance // traceable author statement /// 0006325 // chromatin organization // non-traceable author statement /// 0006334 // nucleosome assembly // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0045653 // negative regulation of megakaryocyte differentiation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement","0000786 // nucleosome // traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26285354-26285727 (-) // 99.47 // p22.2"]
["11750027_a_at",0.22037792,0.23691463,0.16140652,-0.2844386,-0.16140652,-0.28106642,0.0016394282,0.0006460279,1.3646556,0.44853687,1.3646556,"up","SLC35F2",54733,"0006810 // transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:107663323-107729534 (-) // 100.0 // q22.3"]
["11738060_s_at",0.28587437,0.22888947,0.19921875,-0.24988079,-0.19921875,-0.43047953,0.0032469141,0.0020611333,1.4451178,0.5311872,1.4451178,"up","HIST1H4E","121504 /// 554313 /// 8294 /// 8359 /// 8360 /// 8361 /// 8362 /// 8363 /// 8364 /// 8365 /// 8366 /// 8367 /// 8368 /// 8370","0000723 // telomere maintenance // traceable author statement /// 0006325 // chromatin organization // non-traceable author statement /// 0006334 // nucleosome assembly // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0045653 // negative regulation of megakaryocyte differentiation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement","0000786 // nucleosome // traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26285354-26285727 (-) // 99.47 // p22.2"]
["11738060_s_at",0.28587437,0.22888947,0.19921875,-0.24988079,-0.19921875,-0.43047953,0.0032469141,0.0020611333,1.4451178,0.5311872,1.4451178,"up","HIST1H4F","121504 /// 554313 /// 8294 /// 8359 /// 8360 /// 8361 /// 8362 /// 8363 /// 8364 /// 8365 /// 8366 /// 8367 /// 8368 /// 8370","0000723 // telomere maintenance // traceable author statement /// 0006325 // chromatin organization // non-traceable author statement /// 0006334 // nucleosome assembly // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0045653 // negative regulation of megakaryocyte differentiation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement","0000786 // nucleosome // traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26285354-26285727 (-) // 99.47 // p22.2"]
["11738263_s_at",0.23723745,0.28707123,0.13931465,-0.20389462,-0.15677404,-0.13931465,0.0022657276,0.001223802,1.3084592,0.38786888,1.3084592,"up","AUTS2",26053,"","","","chr7:69063420-69755606 (+) // 86.36 // q11.22"]
["11758434_s_at",-0.40974712,-0.35171223,-0.23066902,0.23066902,0.37564754,0.28521824,0.0017462111,0.0007475167,-1.5453008,-0.6278877,1.5453008,"down","FBXW2",26190,"0006464 // cellular protein modification process // traceable author statement /// 0006508 // proteolysis // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0016567 // protein ubiquitination // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // traceable author statement /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement","chr9:123521481-123521997 (-) // 38.76 // q33.2"]
["11738060_s_at",0.28587437,0.22888947,0.19921875,-0.24988079,-0.19921875,-0.43047953,0.0032469141,0.0020611333,1.4451178,0.5311872,1.4451178,"up","HIST1H4C","121504 /// 554313 /// 8294 /// 8359 /// 8360 /// 8361 /// 8362 /// 8363 /// 8364 /// 8365 /// 8366 /// 8367 /// 8368 /// 8370","0000723 // telomere maintenance // traceable author statement /// 0006325 // chromatin organization // non-traceable author statement /// 0006334 // nucleosome assembly // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0045653 // negative regulation of megakaryocyte differentiation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement","0000786 // nucleosome // traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26285354-26285727 (-) // 99.47 // p22.2"]
["11738060_s_at",0.28587437,0.22888947,0.19921875,-0.24988079,-0.19921875,-0.43047953,0.0032469141,0.0020611333,1.4451178,0.5311872,1.4451178,"up","HIST1H4D","121504 /// 554313 /// 8294 /// 8359 /// 8360 /// 8361 /// 8362 /// 8363 /// 8364 /// 8365 /// 8366 /// 8367 /// 8368 /// 8370","0000723 // telomere maintenance // traceable author statement /// 0006325 // chromatin organization // non-traceable author statement /// 0006334 // nucleosome assembly // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0045653 // negative regulation of megakaryocyte differentiation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement","0000786 // nucleosome // traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26285354-26285727 (-) // 99.47 // p22.2"]
["11738060_s_at",0.28587437,0.22888947,0.19921875,-0.24988079,-0.19921875,-0.43047953,0.0032469141,0.0020611333,1.4451178,0.5311872,1.4451178,"up","HIST1H4I","121504 /// 554313 /// 8294 /// 8359 /// 8360 /// 8361 /// 8362 /// 8363 /// 8364 /// 8365 /// 8366 /// 8367 /// 8368 /// 8370","0000723 // telomere maintenance // traceable author statement /// 0006325 // chromatin organization // non-traceable author statement /// 0006334 // nucleosome assembly // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0045653 // negative regulation of megakaryocyte differentiation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement","0000786 // nucleosome // traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26285354-26285727 (-) // 99.47 // p22.2"]
["11717900_at",0.24262428,0.19909859,0.17754269,-0.17754269,-0.25414848,-0.17959976,0.001091852,0.00020435949,1.3288567,0.41018552,1.3288567,"up","ASF1B",55723,"0006333 // chromatin assembly or disassembly // inferred from electronic annotation /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0042393 // histone binding // inferred from electronic annotation","chr19:14230323-14248127 (-) // 97.14 // p13.12"]
["11738060_s_at",0.28587437,0.22888947,0.19921875,-0.24988079,-0.19921875,-0.43047953,0.0032469141,0.0020611333,1.4451178,0.5311872,1.4451178,"up","HIST1H4J","121504 /// 554313 /// 8294 /// 8359 /// 8360 /// 8361 /// 8362 /// 8363 /// 8364 /// 8365 /// 8366 /// 8367 /// 8368 /// 8370","0000723 // telomere maintenance // traceable author statement /// 0006325 // chromatin organization // non-traceable author statement /// 0006334 // nucleosome assembly // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0045653 // negative regulation of megakaryocyte differentiation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement","0000786 // nucleosome // traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26285354-26285727 (-) // 99.47 // p22.2"]
["11738060_s_at",0.28587437,0.22888947,0.19921875,-0.24988079,-0.19921875,-0.43047953,0.0032469141,0.0020611333,1.4451178,0.5311872,1.4451178,"up","HIST1H4H","121504 /// 554313 /// 8294 /// 8359 /// 8360 /// 8361 /// 8362 /// 8363 /// 8364 /// 8365 /// 8366 /// 8367 /// 8368 /// 8370","0000723 // telomere maintenance // traceable author statement /// 0006325 // chromatin organization // non-traceable author statement /// 0006334 // nucleosome assembly // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0045653 // negative regulation of megakaryocyte differentiation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement","0000786 // nucleosome // traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26285354-26285727 (-) // 99.47 // p22.2"]
["11741186_at",0.4046936,0.32256794,0.30598354,-0.30598354,-0.3142252,-0.34846592,0.0006672249,3.6048226e-5,1.5881053,0.6673066,1.5881053,"up","HIST1H3J","8350 /// 8351 /// 8352 /// 8353 /// 8354 /// 8355 /// 8356 /// 8357 /// 8358 /// 8968","0006334 // nucleosome assembly // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0051320 // S phase // non-traceable author statement /// 0060968 // regulation of gene silencing // inferred from direct assay","0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26196982-26199521 (-) // 77.41 // p22.2"]
["11732548_a_at",1.2753935,0.2847495,0.40278387,-0.35021257,-0.40144014,-0.2847495,0.03464406,0.033480305,1.99969,0.99977636,1.99969,"up","MYO1A",4640,"0007605 // sensory perception of sound // inferred from mutant phenotype /// 0030030 // cell projection organization // inferred from electronic annotation /// 0030033 // microvillus assembly // inferred from electronic annotation /// 0051648 // vesicle localization // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005902 // microvillus // inferred from direct assay /// 0005902 // microvillus // inferred from electronic annotation /// 0005903 // brush border // inferred from direct assay /// 0005903 // brush border // inferred from electronic annotation /// 0009925 // basal plasma membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0016328 // lateral plasma membrane // inferred from direct assay /// 0016328 // lateral plasma membrane // inferred from electronic annotation /// 0016459 // myosin complex // inferred from electronic annotation /// 0030864 // cortical actin cytoskeleton // inferred from direct assay /// 0031941 // filamentous actin // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation","chr12:57422301-57443892 (-) // 98.23 // q13.3"]
["11723279_s_at",-0.41207218,-0.38211775,-0.29885435,0.2989111,0.45161915,0.29885387,0.0012460877,0.00030734768,-1.6405082,-0.7141428,1.6405082,"down","CREBZF",58487,"0006351 // transcription, DNA-dependent // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0009615 // response to virus // inferred from direct assay /// 0045814 // negative regulation of gene expression, epigenetic // inferred from expression pattern /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr11:85368395-85376185 (-) // 93.51 // q14.1"]
["11733197_a_at",-0.18923616,-0.14633894,-0.20297289,0.40628386,0.3422718,0.14633894,0.0053069955,0.003953963,-1.3926321,-0.4778142,1.3926321,"down","KIAA1586",57691,"","","0003676 // nucleic acid binding // inferred from electronic annotation","chr6:56911329-56920119 (+) // 85.61 // p12.1"]
["11733690_s_at",0.15404415,0.2177496,0.21042252,-0.1540432,-0.28518295,-0.22974014,0.0016202792,0.00063287246,1.3352046,0.41706085,1.3352046,"up","SEC11A",23478,"0006112 // energy reserve metabolic process // traceable author statement /// 0006412 // translation // traceable author statement /// 0006465 // signal peptide processing // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr15:85212774-85259674 (-) // 94.13 // q25.3"]
["11718068_at",0.15103626,0.18579578,0.1536541,-0.15103626,-0.25171185,-0.3031988,0.001979921,0.0009788757,1.3184209,0.398811,1.3184209,"up","MYO1E",4643,"0001570 // vasculogenesis // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0003094 // glomerular filtration // inferred from sequence or structural similarity /// 0003094 // glomerular filtration // inferred from electronic annotation /// 0006807 // nitrogen compound metabolic process // inferred from electronic annotation /// 0006897 // endocytosis // inferred from mutant phenotype /// 0030048 // actin filament-based movement // traceable author statement /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0032836 // glomerular basement membrane development // inferred from sequence or structural similarity /// 0032836 // glomerular basement membrane development // inferred from electronic annotation /// 0035166 // post-embryonic hemopoiesis // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0072015 // glomerular visceral epithelial cell development // inferred from sequence or structural similarity /// 0072015 // glomerular visceral epithelial cell development // inferred from electronic annotation","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from sequence or structural similarity /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005912 // adherens junction // inferred from sequence or structural similarity /// 0005912 // adherens junction // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0016459 // myosin complex // traceable author statement /// 0016459 // myosin complex // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045334 // clathrin-coated endocytic vesicle // inferred from direct assay","0000146 // microfilament motor activity // traceable author statement /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // traceable author statement /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from direct assay /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from direct assay /// 0042623 // ATPase activity, coupled // inferred from direct assay /// 0042623 // ATPase activity, coupled // traceable author statement /// 0051015 // actin filament binding // inferred from direct assay","chr15:59428168-59665139 (-) // 92.26 // q22.2"]
["11716408_a_at",0.33119488,0.28111172,0.3808279,-0.32506084,-0.28111172,-0.38975334,0.0008691947,0.00010051858,1.5833938,0.66302013,1.5833938,"up","MET",4233,"0000187 // activation of MAPK activity // inferred from electronic annotation /// 0001101 // response to acid // inferred from electronic annotation /// 0001764 // neuron migration // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0001890 // placenta development // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007166 // cell surface receptor signaling pathway // non-traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007420 // brain development // inferred from electronic annotation /// 0007517 // muscle organ development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0007569 // cell aging // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008584 // male gonad development // inferred from electronic annotation /// 0009611 // response to wounding // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010800 // positive regulation of peptidyl-threonine phosphorylation // inferred from electronic annotation /// 0010801 // negative regulation of peptidyl-threonine phosphorylation // inferred from electronic annotation /// 0010828 // positive regulation of glucose transport // inferred from electronic annotation /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0014003 // oligodendrocyte development // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014812 // muscle cell migration // inferred from electronic annotation /// 0014902 // myotube differentiation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0021953 // central nervous system neuron differentiation // inferred from electronic annotation /// 0030317 // sperm motility // inferred from electronic annotation /// 0030534 // adult behavior // inferred from electronic annotation /// 0031016 // pancreas development // inferred from electronic annotation /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0045840 // positive regulation of mitosis // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048012 // hepatocyte growth factor receptor signaling pathway // traceable author statement /// 0048012 // hepatocyte growth factor receptor signaling pathway // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from mutant phenotype /// 0050775 // positive regulation of dendrite morphogenesis // inferred from electronic annotation /// 0051450 // myoblast proliferation // inferred from electronic annotation /// 0060665 // regulation of branching involved in salivary gland morphogenesis by mesenchymal-epithelial signaling // inferred from electronic annotation /// 0071241 // cellular response to inorganic substance // inferred from electronic annotation /// 0071243 // cellular response to arsenic-containing substance // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0071354 // cellular response to interleukin-6 // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0071375 // cellular response to peptide hormone stimulus // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009925 // basal plasma membrane // inferred from direct assay /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019861 // flagellum // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0060076 // excitatory synapse // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // non-traceable author statement /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005008 // hepatocyte growth factor-activated receptor activity // traceable author statement /// 0005008 // hepatocyte growth factor-activated receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008013 // beta-catenin binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0043274 // phospholipase binding // inferred from electronic annotation /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr7:116312458-116438433 (+) // 94.38 // q31.2"]
["11725632_at",-0.22424698,-0.17764139,-0.18604374,0.20835686,0.31546497,0.17764139,0.0016183598,0.00062447175,-1.3470454,-0.42979845,1.3470454,"down","NR4A2",4929,"0001666 // response to hypoxia // inferred from electronic annotation /// 0001764 // neuron migration // inferred from electronic annotation /// 0001975 // response to amphetamine // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0010035 // response to inorganic substance // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010467 // gene expression // inferred from electronic annotation /// 0016265 // death // inferred from electronic annotation /// 0017085 // response to insecticide // inferred from electronic annotation /// 0021952 // central nervous system projection neuron axonogenesis // inferred from electronic annotation /// 0021953 // central nervous system neuron differentiation // inferred from electronic annotation /// 0021986 // habenula development // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0030522 // intracellular receptor mediated signaling pathway // traceable author statement /// 0030522 // intracellular receptor mediated signaling pathway // inferred from electronic annotation /// 0031668 // cellular response to extracellular stimulus // inferred from direct assay /// 0031668 // cellular response to extracellular stimulus // inferred from electronic annotation /// 0033554 // cellular response to stress // inferred from electronic annotation /// 0042053 // regulation of dopamine metabolic process // inferred from electronic annotation /// 0042416 // dopamine biosynthetic process // inferred from electronic annotation /// 0042417 // dopamine metabolic process // inferred from electronic annotation /// 0042551 // neuron maturation // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043576 // regulation of respiratory gaseous exchange // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0071542 // dopaminergic neuron differentiation // inferred from electronic annotation /// 0071542 // dopaminergic neuron differentiation // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr2:157180943-157189287 (-) // 97.29 // q24.1"]
["11717803_a_at",0.25677586,0.412776,0.3369074,-0.36027002,-0.28775358,-0.25677538,0.0012443048,0.0003059854,1.5551848,0.63708603,1.5551848,"up","NTN4",59277,"0007411 // axon guidance // traceable author statement /// 0016322 // neuron remodeling // inferred from electronic annotation /// 0060668 // regulation of branching involved in salivary gland morphogenesis by extracellular matrix-epithelial cell signaling // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement","0043237 // laminin-1 binding // inferred from electronic annotation","chr12:96051582-96184593 (-) // 98.47 // q22"]
["11734004_x_at",-0.25032902,-0.24337578,-0.24549103,0.24337578,0.3202629,0.30624294,0.0005921098,2.2694992e-5,-1.4503078,-0.53635913,1.4503078,"down","ZNF320","162967 /// 201931","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:165997230-166034071 (-) // 71.47 // q32.3"]
["11730732_at",-0.2112484,-0.2398634,-0.31050873,0.3896618,0.26064396,0.2112484,0.0018915365,0.00088222825,-1.4550394,-0.5410582,1.4550394,"down","DNASE2",1777,"0006259 // DNA metabolic process // traceable author statement /// 0006259 // DNA metabolic process // inferred from electronic annotation /// 0006308 // DNA catabolic process // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030218 // erythrocyte differentiation // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation /// 0005764 // lysosome // traceable author statement","0003677 // DNA binding // traceable author statement /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0004520 // endodeoxyribonuclease activity // inferred from electronic annotation /// 0004531 // deoxyribonuclease II activity // inferred from electronic annotation /// 0004531 // deoxyribonuclease II activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation","chr19:12927527-12992386 (-) // 62.07 // p13.2"]
["11715388_s_at",-0.20104885,-0.23075104,-0.2625122,0.27972794,0.20104885,0.3385601,0.0012674241,0.00031876643,-1.4186804,-0.5045497,1.4186804,"down","CDKN1A",1026,"0000075 // cell cycle checkpoint // traceable author statement /// 0000079 // regulation of cyclin-dependent protein kinase activity // traceable author statement /// 0000079 // regulation of cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0000080 // G1 phase of mitotic cell cycle // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // inferred from direct assay /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000086 // G2/M transition of mitotic cell cycle // inferred from mutant phenotype /// 0000278 // mitotic cell cycle // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from mutant phenotype /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // inferred from direct assay /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007050 // cell cycle arrest // inferred from mutant phenotype /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007265 // Ras protein signal transduction // inferred from expression pattern /// 0007346 // regulation of mitotic cell cycle // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0009411 // response to UV // inferred from electronic annotation /// 0009636 // response to toxin // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010243 // response to organic nitrogen // inferred from electronic annotation /// 0010332 // response to gamma radiation // inferred from expression pattern /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0030890 // positive regulation of B cell proliferation // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0031668 // cellular response to extracellular stimulus // inferred from mutant phenotype /// 0033158 // regulation of protein import into nucleus, translocation // inferred from electronic annotation /// 0042326 // negative regulation of phosphorylation // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043068 // positive regulation of programmed cell death // inferred from electronic annotation /// 0045736 // negative regulation of cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0045768 // positive regulation of anti-apoptosis // inferred from electronic annotation /// 0046685 // response to arsenic-containing substance // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048146 // positive regulation of fibroblast proliferation // inferred from mutant phenotype /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051412 // response to corticosterone stimulus // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0055093 // response to hyperoxia // inferred from electronic annotation /// 0071479 // cellular response to ionizing radiation // inferred from mutant phenotype /// 0071850 // mitotic cell cycle arrest // inferred from electronic annotation /// 0090398 // cellular senescence // inferred from mutant phenotype /// 0090400 // stress-induced premature senescence // traceable author statement /// 2000278 // regulation of DNA biosynthetic process // inferred from electronic annotation /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from mutant phenotype","0000307 // cyclin-dependent protein kinase holoenzyme complex // inferred from direct assay /// 0000307 // cyclin-dependent protein kinase holoenzyme complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0070557 // PCNA-p21 complex // inferred from direct assay","0004860 // protein kinase inhibitor activity // inferred from electronic annotation /// 0004861 // cyclin-dependent protein kinase inhibitor activity // inferred from electronic annotation /// 0004861 // cyclin-dependent protein kinase inhibitor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0019912 // cyclin-dependent protein kinase activating kinase activity // inferred from direct assay /// 0030332 // cyclin binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:36646490-36655108 (+) // 72.51 // p21.2"]
["11724122_a_at",0.40561485,0.28231525,0.35057735,-0.3277855,-0.28231525,-0.33448696,0.0007584205,7.283711e-5,1.581213,0.6610317,1.581213,"up","SLC35G2",80723,"","0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:136537860-136574734 (+) // 95.95 // q22.3"]
["11741186_at",0.4046936,0.32256794,0.30598354,-0.30598354,-0.3142252,-0.34846592,0.0006672249,3.6048226e-5,1.5881053,0.6673066,1.5881053,"up","HIST1H3A","8350 /// 8351 /// 8352 /// 8353 /// 8354 /// 8355 /// 8356 /// 8357 /// 8358 /// 8968","0006334 // nucleosome assembly // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0051320 // S phase // non-traceable author statement /// 0060968 // regulation of gene silencing // inferred from direct assay","0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26196982-26199521 (-) // 77.41 // p22.2"]
["11756384_a_at",0.19810247,0.3822589,0.16441965,-0.23691177,-0.2200613,-0.16441965,0.004360689,0.003061121,1.3711545,0.45539123,1.3711545,"up","IKBKG",8517,"0000187 // activation of MAPK activity // traceable author statement /// 0001782 // B cell homeostasis // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0006955 // immune response // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0007249 // I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0007250 // activation of NF-kappaB-inducing kinase activity // inferred from electronic annotation /// 0007254 // JNK cascade // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0009615 // response to virus // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0050852 // T cell receptor signaling pathway // non-traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement","0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0008385 // IkappaB kinase complex // traceable author statement /// 0044444 // cytoplasmic part // inferred from direct assay","0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:153775561-153786866 (+) // 83.04 // q28"]
["11741186_at",0.4046936,0.32256794,0.30598354,-0.30598354,-0.3142252,-0.34846592,0.0006672249,3.6048226e-5,1.5881053,0.6673066,1.5881053,"up","HIST1H3B","8350 /// 8351 /// 8352 /// 8353 /// 8354 /// 8355 /// 8356 /// 8357 /// 8358 /// 8968","0006334 // nucleosome assembly // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0051320 // S phase // non-traceable author statement /// 0060968 // regulation of gene silencing // inferred from direct assay","0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26196982-26199521 (-) // 77.41 // p22.2"]
["11741186_at",0.4046936,0.32256794,0.30598354,-0.30598354,-0.3142252,-0.34846592,0.0006672249,3.6048226e-5,1.5881053,0.6673066,1.5881053,"up","HIST1H3C","8350 /// 8351 /// 8352 /// 8353 /// 8354 /// 8355 /// 8356 /// 8357 /// 8358 /// 8968","0006334 // nucleosome assembly // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0051320 // S phase // non-traceable author statement /// 0060968 // regulation of gene silencing // inferred from direct assay","0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26196982-26199521 (-) // 77.41 // p22.2"]
["11741186_at",0.4046936,0.32256794,0.30598354,-0.30598354,-0.3142252,-0.34846592,0.0006672249,3.6048226e-5,1.5881053,0.6673066,1.5881053,"up","HIST1H3D","8350 /// 8351 /// 8352 /// 8353 /// 8354 /// 8355 /// 8356 /// 8357 /// 8358 /// 8968","0006334 // nucleosome assembly // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0051320 // S phase // non-traceable author statement /// 0060968 // regulation of gene silencing // inferred from direct assay","0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26196982-26199521 (-) // 77.41 // p22.2"]
["11741186_at",0.4046936,0.32256794,0.30598354,-0.30598354,-0.3142252,-0.34846592,0.0006672249,3.6048226e-5,1.5881053,0.6673066,1.5881053,"up","HIST1H3E","8350 /// 8351 /// 8352 /// 8353 /// 8354 /// 8355 /// 8356 /// 8357 /// 8358 /// 8968","0006334 // nucleosome assembly // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0051320 // S phase // non-traceable author statement /// 0060968 // regulation of gene silencing // inferred from direct assay","0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26196982-26199521 (-) // 77.41 // p22.2"]
["11725456_s_at",-0.29146576,-0.26496267,-0.31765604,0.3040676,0.37084198,0.26496267,0.0007266058,6.188457e-5,-1.5206121,-0.6046522,1.5206121,"down","FBXO33",254170,"0016567 // protein ubiquitination // inferred from electronic annotation","","","chr14:39866885-39901704 (-) // 95.28 // q21.1"]
["11715446_a_at",-0.5156126,-0.70974445,-0.78550625,0.7445879,0.5755949,0.5156126,0.0012010665,0.0002643174,-2.432129,-1.2822196,2.432129,"down","DNAJB1",3337,"0006457 // protein folding // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // traceable author statement /// 0051085 // chaperone mediated protein folding requiring cofactor // inferred from electronic annotation /// 0070389 // chaperone cofactor-dependent protein refolding // inferred from direct assay","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0031072 // heat shock protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr19:14624909-14629338 (-) // 91.55 // p13.12"]
["11741186_at",0.4046936,0.32256794,0.30598354,-0.30598354,-0.3142252,-0.34846592,0.0006672249,3.6048226e-5,1.5881053,0.6673066,1.5881053,"up","HIST1H3F","8350 /// 8351 /// 8352 /// 8353 /// 8354 /// 8355 /// 8356 /// 8357 /// 8358 /// 8968","0006334 // nucleosome assembly // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0051320 // S phase // non-traceable author statement /// 0060968 // regulation of gene silencing // inferred from direct assay","0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26196982-26199521 (-) // 77.41 // p22.2"]
["11741186_at",0.4046936,0.32256794,0.30598354,-0.30598354,-0.3142252,-0.34846592,0.0006672249,3.6048226e-5,1.5881053,0.6673066,1.5881053,"up","HIST1H3G","8350 /// 8351 /// 8352 /// 8353 /// 8354 /// 8355 /// 8356 /// 8357 /// 8358 /// 8968","0006334 // nucleosome assembly // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0051320 // S phase // non-traceable author statement /// 0060968 // regulation of gene silencing // inferred from direct assay","0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26196982-26199521 (-) // 77.41 // p22.2"]
["11727671_a_at",0.32369423,0.22560167,0.35551023,-0.6846194,-0.30461073,-0.22560167,0.010089653,0.008603579,1.6318924,0.70654595,1.6318924,"up","SYT17",51760,"0006810 // transport // inferred from electronic annotation","0005802 // trans-Golgi network // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation","chr16:19179534-19279656 (+) // 91.6 // p12.3"]
["11741186_at",0.4046936,0.32256794,0.30598354,-0.30598354,-0.3142252,-0.34846592,0.0006672249,3.6048226e-5,1.5881053,0.6673066,1.5881053,"up","HIST1H3H","8350 /// 8351 /// 8352 /// 8353 /// 8354 /// 8355 /// 8356 /// 8357 /// 8358 /// 8968","0006334 // nucleosome assembly // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0051320 // S phase // non-traceable author statement /// 0060968 // regulation of gene silencing // inferred from direct assay","0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26196982-26199521 (-) // 77.41 // p22.2"]
["11716330_a_at",0.6930747,0.70113325,0.3941121,-0.45837116,-0.5624585,-0.3941121,0.0016760693,0.00068303355,2.0961676,1.067754,2.0961676,"up","DNAJB6",10049,"0006457 // protein folding // inferred from direct assay /// 0006457 // protein folding // inferred from electronic annotation /// 0006986 // response to unfolded protein // non-traceable author statement /// 0032781 // positive regulation of ATPase activity // inferred from direct assay /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0045109 // intermediate filament organization // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0060710 // chorio-allantoic fusion // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030018 // Z disc // inferred from direct assay /// 0030018 // Z disc // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0001671 // ATPase activator activity // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031072 // heat shock protein binding // inferred from direct assay /// 0031072 // heat shock protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from direct assay","chr7:157129709-157210133 (+) // 92.93 // q36.3"]
["11729298_a_at",-0.30058384,-0.42519665,-0.46757317,0.30058384,0.37874794,0.39961624,0.001091852,0.00020501613,-1.6904811,-0.7574339,1.6904811,"down","SDE2",163859,"","","","chr1:226170852-226187178 (-) // 40.65 // q42.12"]
["11741186_at",0.4046936,0.32256794,0.30598354,-0.30598354,-0.3142252,-0.34846592,0.0006672249,3.6048226e-5,1.5881053,0.6673066,1.5881053,"up","HIST1H3I","8350 /// 8351 /// 8352 /// 8353 /// 8354 /// 8355 /// 8356 /// 8357 /// 8358 /// 8968","0006334 // nucleosome assembly // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0051320 // S phase // non-traceable author statement /// 0060968 // regulation of gene silencing // inferred from direct assay","0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26196982-26199521 (-) // 77.41 // p22.2"]
["11723878_a_at",0.62828064,0.49782133,0.3734312,-0.50224495,-0.37786627,-0.3734312,0.0013953822,0.00041416503,1.8890905,0.9176919,1.8890905,"up","ATP7B",540,"0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006825 // copper ion transport // inferred from genetic interaction /// 0006825 // copper ion transport // inferred from electronic annotation /// 0006878 // cellular copper ion homeostasis // traceable author statement /// 0006878 // cellular copper ion homeostasis // inferred from electronic annotation /// 0006882 // cellular zinc ion homeostasis // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0015677 // copper ion import // inferred from direct assay /// 0015680 // intracellular copper ion transport // inferred from electronic annotation /// 0030001 // metal ion transport // inferred from electronic annotation /// 0034220 // ion transmembrane transport // traceable author statement /// 0046034 // ATP metabolic process // inferred from electronic annotation /// 0046688 // response to copper ion // inferred from direct assay /// 0051208 // sequestering of calcium ion // inferred from direct assay /// 0055085 // transmembrane transport // traceable author statement /// 0060003 // copper ion export // non-traceable author statement /// 0060003 // copper ion export // traceable author statement /// 0060003 // copper ion export // inferred from electronic annotation","0000139 // Golgi membrane // traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004008 // copper-exporting ATPase activity // non-traceable author statement /// 0004008 // copper-exporting ATPase activity // traceable author statement /// 0004008 // copper-exporting ATPase activity // inferred from electronic annotation /// 0005507 // copper ion binding // inferred from direct assay /// 0005507 // copper ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0043682 // copper-transporting ATPase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr13:52506809-52586201 (-) // 96.94 // q14.3"]
["11750582_a_at",0.66803503,0.34581614,0.2560315,-0.2560315,-0.34664392,-0.3063407,0.0060592825,0.0047327504,1.6543902,0.7262996,1.6543902,"up","HDAC6",10013,"0000209 // protein polyubiquitination // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006476 // protein deacetylation // inferred from mutant phenotype /// 0006476 // protein deacetylation // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006515 // misfolded or incompletely synthesized protein catabolic process // inferred from mutant phenotype /// 0006886 // intracellular protein transport // inferred from mutant phenotype /// 0006914 // autophagy // inferred from electronic annotation /// 0007026 // negative regulation of microtubule depolymerization // inferred from electronic annotation /// 0009636 // response to toxin // inferred from mutant phenotype /// 0009967 // positive regulation of signal transduction // inferred from mutant phenotype /// 0010033 // response to organic substance // inferred from mutant phenotype /// 0010469 // regulation of receptor activity // inferred from mutant phenotype /// 0010634 // positive regulation of epithelial cell migration // inferred from mutant phenotype /// 0010727 // negative regulation of hydrogen peroxide metabolic process // inferred by curator /// 0010870 // positive regulation of receptor biosynthetic process // inferred from mutant phenotype /// 0016236 // macroautophagy // inferred from mutant phenotype /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016575 // histone deacetylation // inferred from direct assay /// 0016575 // histone deacetylation // inferred from sequence or structural similarity /// 0016575 // histone deacetylation // inferred from electronic annotation /// 0032418 // lysosome localization // inferred from mutant phenotype /// 0034983 // peptidyl-lysine deacetylation // inferred from mutant phenotype /// 0035967 // cellular response to topologically incorrect protein // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043162 // ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway // inferred from electronic annotation /// 0043242 // negative regulation of protein complex disassembly // inferred from mutant phenotype /// 0045861 // negative regulation of proteolysis // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0051354 // negative regulation of oxidoreductase activity // inferred by curator /// 0051788 // response to misfolded protein // inferred from mutant phenotype /// 0060632 // regulation of microtubule-based movement // inferred by curator /// 0060765 // regulation of androgen receptor signaling pathway // traceable author statement /// 0070301 // cellular response to hydrogen peroxide // inferred from mutant phenotype /// 0070842 // aggresome assembly // inferred from mutant phenotype /// 0070842 // aggresome assembly // inferred from electronic annotation /// 0070845 // polyubiquitinated misfolded protein transport // inferred from mutant phenotype /// 0070846 // Hsp90 deacetylation // inferred from mutant phenotype /// 0070846 // Hsp90 deacetylation // inferred from electronic annotation /// 0070848 // response to growth factor stimulus // inferred from mutant phenotype /// 0071218 // cellular response to misfolded protein // inferred from electronic annotation /// 0090035 // positive regulation of chaperone-mediated protein complex assembly // inferred from mutant phenotype /// 0090042 // tubulin deacetylation // inferred from direct assay /// 0090042 // tubulin deacetylation // inferred from sequence or structural similarity /// 0090042 // tubulin deacetylation // inferred from electronic annotation","0000118 // histone deacetylase complex // inferred from direct assay /// 0005622 // intracellular // inferred from mutant phenotype /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005875 // microtubule associated complex // inferred from direct assay /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation /// 0005901 // caveola // inferred from direct assay /// 0016234 // inclusion body // inferred from direct assay /// 0016235 // aggresome // inferred from direct assay /// 0030286 // dynein complex // inferred from direct assay /// 0031252 // cell leading edge // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0003779 // actin binding // inferred from electronic annotation /// 0004407 // histone deacetylase activity // inferred from direct assay /// 0004407 // histone deacetylase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from direct assay /// 0008017 // microtubule binding // inferred from sequence or structural similarity /// 0008017 // microtubule binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from sequence or structural similarity /// 0031078 // histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0031593 // polyubiquitin binding // inferred from direct assay /// 0032041 // NAD-dependent histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0032129 // histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0034739 // histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0042903 // tubulin deacetylase activity // inferred from direct assay /// 0042903 // tubulin deacetylase activity // inferred from sequence or structural similarity /// 0042903 // tubulin deacetylase activity // inferred from electronic annotation /// 0043014 // alpha-tubulin binding // inferred from direct assay /// 0043130 // ubiquitin binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046969 // NAD-dependent histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0046970 // NAD-dependent histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation /// 0048156 // tau protein binding // inferred from direct assay /// 0048487 // beta-tubulin binding // inferred from electronic annotation /// 0051879 // Hsp90 protein binding // inferred from direct assay /// 0070840 // dynein complex binding // inferred from direct assay","chrX:48661186-48683132 (+) // 100.0 // p11.23"]
["11717496_a_at",-0.17192459,-0.17415619,-0.23462772,0.18087101,0.17192459,0.21312618,0.00084399927,9.163144e-5,-1.303337,-0.38221008,1.303337,"down","IMPA2",3613,"0006021 // inositol biosynthetic process // inferred from electronic annotation /// 0006796 // phosphate-containing compound metabolic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation /// 0046855 // inositol phosphate dephosphorylation // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay","0008934 // inositol monophosphate 1-phosphatase activity // inferred from direct assay /// 0008934 // inositol monophosphate 1-phosphatase activity // inferred from electronic annotation /// 0008934 // inositol monophosphate 1-phosphatase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0052832 // inositol monophosphate 3-phosphatase activity // inferred from electronic annotation /// 0052833 // inositol monophosphate 4-phosphatase activity // inferred from electronic annotation /// 0052834 // inositol monophosphate phosphatase activity // inferred from electronic annotation","chr18:11981426-12030876 (+) // 90.6 // p11.21"]
["11743179_a_at",0.2328701,0.17501068,0.23021984,-0.17501068,-0.23356342,-0.29326916,0.0012819535,0.00033180622,1.36287,0.44664794,1.36287,"up","RSF1",51773,"0006334 // nucleosome assembly // inferred from direct assay /// 0006334 // nucleosome assembly // traceable author statement /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006352 // transcription initiation, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016584 // nucleosome positioning // inferred from direct assay /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0043392 // negative regulation of DNA binding // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0050434 // positive regulation of viral transcription // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0031213 // RSF complex // inferred from physical interaction","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0042393 // histone binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:77376777-77532063 (-) // 97.85 // q14.1"]
["11722058_s_at",-0.30084038,-0.35076332,-0.32036018,0.46415615,0.43182755,0.30084038,0.0009984163,0.00015522321,-1.65053,-0.72292936,1.65053,"down","ATL2",64225,"0006184 // GTP catabolic process // non-traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from mutant phenotype /// 0007029 // endoplasmic reticulum organization // inferred from mutant phenotype /// 0007030 // Golgi organization // inferred from mutant phenotype /// 0051260 // protein homooligomerization // inferred from direct assay","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // non-traceable author statement /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from direct assay","chr2:38522021-38604432 (-) // 94.95 // p22.2"]
["11745063_x_at",-0.21608591,-0.1858058,-0.26689625,0.34547663,0.1858058,0.24323416,0.0017807008,0.00077838555,-1.3958089,-0.4811015,1.3958089,"down","LRRC8B",23507,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:90057723-90058936 (+) // 50.0 // p22.2"]
["11721843_a_at",0.2346716,0.20325756,0.22554111,-0.25049782,-0.20325756,-0.28923702,0.0007223185,6.044771e-5,1.3839779,0.4688209,1.3839779,"up","ATL3",25923,"0006184 // GTP catabolic process // non-traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from mutant phenotype /// 0007029 // endoplasmic reticulum organization // inferred from mutant phenotype /// 0007030 // Golgi organization // inferred from mutant phenotype /// 0051260 // protein homooligomerization // inferred from direct assay","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // non-traceable author statement /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from direct assay","chr11:63391553-63439385 (-) // 84.44 // q12.3"]
["11715572_a_at",0.17116928,0.1518383,0.20815182,-0.16666031,-0.31730556,-0.1518383,0.0033525142,0.002164263,1.3094745,0.38898787,1.3094745,"up","CLSTN1",22883,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr1:9789083-9884584 (-) // 90.47 // p36.22"]
["11745006_a_at",0.5101528,0.46435642,0.36277485,-0.36277485,-0.4171276,-0.44791698,0.0007432542,6.946002e-5,1.808802,0.8550345,1.808802,"up","SDC2",6383,"0001666 // response to hypoxia // inferred from electronic annotation /// 0031000 // response to caffeine // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation /// 0048813 // dendrite morphogenesis // inferred from electronic annotation","0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from physical interaction","chr8:97506161-97622843 (+) // 99.46 // q22.1"]
["11745496_a_at",-0.77592707,-0.32515478,-0.26278257,0.26278257,0.34157515,0.3704648,0.010542209,0.0091075245,-1.71661,-0.7795623,1.71661,"down","SPINT2",10653,"0006928 // cellular component movement // traceable author statement /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005625 // soluble fraction // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004866 // endopeptidase inhibitor activity // traceable author statement /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // traceable author statement /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr19:38755182-38783085 (+) // 93.99 // q13.2"]
["11730623_at",-0.61033344,-0.6305833,-0.54047155,0.62289333,0.55236626,0.54047203,0.00040977335,6.3851976e-6,-2.2434306,-1.1657066,2.2434306,"down","DSEL",92126,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008146 // sulfotransferase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation","chr18:65173820-65184217 (-) // 90.76 // q22.1"]
["11758117_s_at",-0.19411373,-0.30024862,-0.27703047,0.5373831,0.32410622,0.19411373,0.005760475,0.0044127796,-1.5252002,-0.60899866,1.5252002,"down","LRRFIP2",9209,"0016055 // Wnt receptor signaling pathway // inferred from electronic annotation","","0005515 // protein binding // inferred from physical interaction /// 0030275 // LRR domain binding // inferred from physical interaction","chr3:37094437-37095137 (-) // 94.6 // p22.2"]
["11732870_a_at",-0.54480314,-0.36582565,-0.56869364,0.36752653,0.43974352,0.36582565,0.0010976536,0.00020770791,-1.8456633,-0.88413936,1.8456633,"down","CASP1",834,"0006508 // proteolysis // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0045087 // innate immune response // traceable author statement /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern /// 0071310 // cellular response to organic substance // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004197 // cysteine-type endopeptidase activity // traceable author statement /// 0004197 // cysteine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0008656 // cysteine-type endopeptidase activator activity involved in apoptotic process // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation","chr11:104896234-104905202 (-) // 96.08 // q22.3"]
["11725602_at",0.17750454,0.20340729,0.26062202,-0.19942856,-0.17750454,-0.3368473,0.0022857466,0.0012462339,1.3677186,0.4517714,1.3677186,"up","DENND5B",160518,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:31535160-31743952 (-) // 84.17 // p11.21"]
["11720035_s_at",-0.18593502,-0.2887802,-0.27831745,0.28554058,0.18593502,0.1872549,0.0015242294,0.0005334935,-1.3856739,-0.47058773,1.3856739,"down","CASP2",835,"0001554 // luteolysis // inferred from electronic annotation /// 0003407 // neural retina development // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006915 // apoptotic process // non-traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // non-traceable author statement /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // inferred from mutant phenotype /// 0007420 // brain development // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0016485 // protein processing // inferred from direct assay /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern /// 0097190 // apoptotic signaling pathway // traceable author statement /// 0097194 // execution phase of apoptosis // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004197 // cysteine-type endopeptidase activity // inferred from direct assay /// 0004197 // cysteine-type endopeptidase activity // inferred from electronic annotation /// 0004197 // cysteine-type endopeptidase activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from sequence or structural similarity /// 0019904 // protein domain specific binding // inferred from physical interaction","chr7:142985307-143004789 (+) // 72.07 // q34"]
["11725501_at",-0.29001427,-0.3103714,-0.2650528,0.35981035,0.2650528,0.30669403,0.0006672249,3.9087754e-5,-1.5146648,-0.59899855,1.5146648,"down","AHNAK",79026,"0007399 // nervous system development // non-traceable author statement","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr11:62201017-62314332 (-) // 94.06 // q12.3"]
["11726840_a_at",0.36740923,0.3534341,0.27864695,-0.2813449,-0.27864695,-0.31566048,0.0006217929,3.1442254e-5,1.5422616,0.6250475,1.5422616,"up","AVL9",23080,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr7:32535059-32624403 (+) // 97.35 // p14.3"]
["11721899_x_at",0.19519997,0.29972172,0.282259,-0.20164394,-0.19519997,-0.24678993,0.0010912282,0.00019643988,1.3885747,0.47360486,1.3885747,"up","FAM216A",29902,"","","","chr12:110906231-110928190 (+) // 94.76 // q24.11"]
["11735886_a_at",0.3764453,0.17498922,0.31040096,-0.20152092,-0.21935272,-0.17498922,0.002380946,0.0013189765,1.4004587,0.48589945,1.4004587,"up","NEK11",79858,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0031572 // G2/M transition DNA damage checkpoint // inferred from mutant phenotype /// 0031573 // intra-S DNA damage checkpoint // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:130745693-130893982 (+) // 96.07 // q22.1"]
["11721875_at",-0.22908115,-0.36737347,-0.34588146,0.5120287,0.25944805,0.22908115,0.004135986,0.0028695406,-1.566594,-0.64763135,1.566594,"down","SLC7A11",23657,"0003333 // amino acid transmembrane transport // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006865 // amino acid transport // traceable author statement /// 0006865 // amino acid transport // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0009636 // response to toxin // inferred from direct assay /// 0035094 // response to nicotine // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0070306 // lens fiber cell differentiation // inferred from electronic annotation","0005791 // rough endoplasmic reticulum // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0015171 // amino acid transmembrane transporter activity // inferred from electronic annotation /// 0015327 // cystine:glutamate antiporter activity // traceable author statement","chr4:139085246-139163724 (-) // 90.24 // q28.3"]
["11759179_at",0.19359207,0.26038837,0.25292397,-0.19359207,-0.39889336,-0.41470337,0.002631878,0.0015369623,1.4859282,0.5713644,1.4859282,"up","TMEM38B",55151,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0015672 // monovalent inorganic cation transport // inferred from electronic annotation /// 0071805 // potassium ion transmembrane transport // traceable author statement /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // non-traceable author statement /// 0033017 // sarcoplasmic reticulum membrane // non-traceable author statement","0005216 // ion channel activity // inferred from electronic annotation /// 0005261 // cation channel activity // inferred from electronic annotation /// 0005267 // potassium channel activity // traceable author statement /// 0005267 // potassium channel activity // inferred from electronic annotation","chr9:108456821-108538097 (+) // 97.78 // q31.2"]
["11725471_a_at",0.22105598,0.31793213,0.2869196,-0.22105598,-0.28977394,-0.25067902,0.00089303567,0.00010922572,1.4430676,0.52913886,1.4430676,"up","MAN2A1",4124,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006013 // mannose metabolic process // inferred from electronic annotation /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006491 // N-glycan processing // inferred from electronic annotation /// 0007005 // mitochondrion organization // inferred from electronic annotation /// 0007033 // vacuole organization // inferred from electronic annotation /// 0007585 // respiratory gaseous exchange // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0048286 // lung alveolus development // inferred from electronic annotation","0000139 // Golgi membrane // traceable author statement /// 0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds // inferred from electronic annotation /// 0004559 // alpha-mannosidase activity // inferred from electronic annotation /// 0004572 // mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity // inferred from electronic annotation /// 0004572 // mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0015923 // mannosidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0016799 // hydrolase activity, hydrolyzing N-glycosyl compounds // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0043169 // cation binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:109025066-109203429 (+) // 97.72 // q21.3"]
["11716577_s_at",0.30813503,0.19369984,0.1456747,-0.1456747,-0.19693947,-0.1959095,0.0025946551,0.0015000338,1.3152567,0.39534444,1.3152567,"up","SDC1",6382,"0001657 // ureteric bud development // inferred from electronic annotation /// 0006629 // lipid metabolic process // traceable author statement /// 0009636 // response to toxin // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation /// 0042157 // lipoprotein metabolic process // traceable author statement /// 0042476 // odontogenesis // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0048627 // myoblast development // inferred from sequence or structural similarity /// 0048627 // myoblast development // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from electronic annotation /// 0055002 // striated muscle cell development // inferred from expression pattern /// 0060009 // Sertoli cell development // inferred from electronic annotation /// 0060070 // canonical Wnt receptor signaling pathway // inferred from electronic annotation","0001931 // uropod // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0005925 // focal adhesion // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0001948 // glycoprotein binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation","chr2:20400557-20425194 (-) // 97.07 // p24.1"]
["11734268_a_at",0.12110424,0.12583113,0.17494202,-0.46172,-0.25128746,-0.12110424,0.015546219,0.014180401,1.3366883,0.41866302,1.3366883,"up","HOXC11",3227,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007492 // endoderm development // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr12:54366909-54370201 (+) // 95.02 // q13.13"]
["11724851_a_at",0.32880068,0.37647295,0.29150772,-0.29150772,-0.334929,-0.4562106,0.0011409034,0.00022945818,1.6168019,0.6931429,1.6168019,"up","STXBP6",29091,"0016192 // vesicle-mediated transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr14:25278862-25519095 (-) // 95.83 // q12"]
["11730262_a_at",0.336174,0.30998516,0.133214,-0.133214,-0.18934155,-0.18716335,0.004201956,0.0029261685,1.346951,0.42969733,1.346951,"up","TBCD",6904,"0006457 // protein folding // inferred from direct assay /// 0006457 // protein folding // traceable author statement /// 0007023 // post-chaperonin tubulin folding pathway // inferred from direct assay /// 0010812 // negative regulation of cell-substrate adhesion // inferred from sequence or structural similarity /// 0031115 // negative regulation of microtubule polymerization // inferred from direct assay /// 0034333 // adherens junction assembly // inferred from sequence or structural similarity /// 0043547 // positive regulation of GTPase activity // inferred from direct assay /// 0043547 // positive regulation of GTPase activity // inferred from mutant phenotype /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0070830 // tight junction assembly // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0005874 // microtubule // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005912 // adherens junction // inferred from sequence or structural similarity /// 0005912 // adherens junction // inferred from electronic annotation /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016328 // lateral plasma membrane // inferred from sequence or structural similarity /// 0016328 // lateral plasma membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from direct assay /// 0005096 // GTPase activator activity // inferred from mutant phenotype /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0048487 // beta-tubulin binding // inferred from direct assay /// 0051087 // chaperone binding // traceable author statement","chr17:80709662-80901492 (+) // 96.58 // q25.3"]
["11754385_s_at",0.22348022,0.25250626,0.23829365,-0.2681408,-0.2564783,-0.22348022,0.00040977335,6.54692e-6,1.4019742,0.48745984,1.4019742,"up","WASL",8976,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006461 // protein complex assembly // inferred from electronic annotation /// 0006461 // protein complex assembly // traceable author statement /// 0006900 // membrane budding // inferred from sequence or structural similarity /// 0006928 // cellular component movement // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0008154 // actin polymerization or depolymerization // inferred from electronic annotation /// 0008154 // actin polymerization or depolymerization // traceable author statement /// 0009617 // response to bacterium // inferred from electronic annotation /// 0016050 // vesicle organization // inferred from sequence or structural similarity /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030050 // vesicle transport along actin filament // inferred from sequence or structural similarity /// 0034629 // cellular protein complex localization // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046209 // nitric oxide metabolic process // traceable author statement /// 0050999 // regulation of nitric-oxide synthase activity // traceable author statement /// 0051491 // positive regulation of filopodium assembly // inferred from sequence or structural similarity /// 0051653 // spindle localization // inferred from electronic annotation /// 2000370 // positive regulation of clathrin-mediated endocytosis // inferred from sequence or structural similarity","0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0015629 // actin cytoskeleton // traceable author statement /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from sequence or structural similarity /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030478 // actin cap // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement","0003779 // actin binding // inferred from electronic annotation /// 0005083 // small GTPase regulator activity // inferred from electronic annotation /// 0005083 // small GTPase regulator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr7:123321569-123323966 (-) // 47.98 // q31.32"]
["11722316_at",0.15947485,0.2945218,0.22202063,-0.15947485,-0.16510248,-0.20640135,0.0016408183,0.00064728234,1.3216425,0.402332,1.3216425,"up","SNX13",23161,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from mutant phenotype /// 0007154 // cell communication // inferred from electronic annotation /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0038032 // termination of G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from direct assay","0005622 // intracellular // inferred from mutant phenotype /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation","0008289 // lipid binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from direct assay /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr7:17830384-17980141 (-) // 97.53 // p21.1"]
["11729646_at",0.7087083,0.34458494,0.41568565,-0.34814167,-0.34458542,-0.42790747,0.0027945365,0.0016692602,1.8190743,0.8632045,1.8190743,"up","TM4SF4",7104,"0042246 // tissue regeneration // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:149191760-149221070 (+) // 94.69 // q25.1"]
["11739560_at",0.31837845,0.4613161,0.4843006,-0.3719654,-0.31837845,-0.5766363,0.0018693322,0.00086216617,1.7945952,0.84365845,1.7945952,"up","GDAP1",54332,"0000266 // mitochondrial fission // inferred from direct assay /// 0006626 // protein targeting to mitochondrion // inferred from mutant phenotype /// 0032526 // response to retinoic acid // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0031307 // integral to mitochondrial outer membrane // inferred from direct assay","","chr8:75262616-75279357 (+) // 99.21 // q21.11"]
["11758026_s_at",-0.15707064,-0.18977928,-0.21459675,0.15707016,0.27236748,0.1797657,0.001558285,0.0005608228,-1.3105901,-0.39021665,1.3105901,"down","SLC35A5",55032,"0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0015780 // nucleotide-sugar transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005338 // nucleotide-sugar transmembrane transporter activity // inferred from electronic annotation /// 0005351 // sugar:hydrogen symporter activity // inferred from electronic annotation","chr3:112302396-112302997 (+) // 84.03 // q13.2"]
["11725862_a_at",0.22025299,0.20310354,0.19077253,-0.41132116,-0.37982273,-0.19077206,0.0026533955,0.0015563845,1.4459474,0.532015,1.4459474,"up","FAM13B",51306,"0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005096 // GTPase activator activity // inferred from electronic annotation","chr5:137273608-137368802 (-) // 98.28 // q31.2"]
["11730603_a_at",0.5335994,0.33687258,0.3866849,-0.3442483,-0.33687258,-0.43439102,0.0012251986,0.00029231698,1.7301409,0.79088956,1.7301409,"up","FAM13C",220965,"","","","chr10:61005578-61122661 (-) // 96.97 // q21.1"]
["11741231_a_at",0.21676731,0.16061878,0.19482708,-0.16061878,-0.16979408,-0.2979803,0.0020834338,0.0010650456,1.3196927,0.4002021,1.3196927,"up","GGPS1",9453,"0006695 // cholesterol biosynthetic process // traceable author statement /// 0006720 // isoprenoid metabolic process // inferred from direct assay /// 0008299 // isoprenoid biosynthetic process // inferred from electronic annotation /// 0033384 // geranyl diphosphate biosynthetic process // inferred from electronic annotation /// 0033386 // geranylgeranyl diphosphate biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045337 // farnesyl diphosphate biosynthetic process // inferred from electronic annotation","0005625 // soluble fraction // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004161 // dimethylallyltranstransferase activity // inferred from electronic annotation /// 0004311 // farnesyltranstransferase activity // inferred from direct assay /// 0004311 // farnesyltranstransferase activity // inferred from electronic annotation /// 0004337 // geranyltranstransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:235491868-235507842 (+) // 89.13 // q42.3"]
["11751027_a_at",0.30467463,0.2921281,0.18846893,-0.18846893,-0.3277421,-0.2890811,0.0016656929,0.0006701445,1.4441173,0.53018796,1.4441173,"up","TMC7",79905,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr16:18995344-19056575 (+) // 98.67 // p12.3"]
["11720274_x_at",0.3601756,0.23809814,0.18417645,-0.18417645,-0.22373772,-0.19117785,0.0020003177,0.0009989064,1.376032,0.46051407,1.376032,"up","ALKBH6",84964,"0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:36500022-36505145 (-) // 91.69 // q13.12"]
["11743077_s_at",-0.07919216,-0.115345,-0.12478542,0.32833958,0.41760254,0.07919216,0.021593252,0.020254135,-1.3026826,-0.38148564,1.3026826,"down","CEBPB",1051,"0001892 // embryonic placenta development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006953 // acute-phase response // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0006955 // immune response // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0033598 // mammary gland epithelial cell proliferation // inferred from electronic annotation /// 0045408 // regulation of interleukin-6 biosynthetic process // inferred from electronic annotation /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0050873 // brown fat cell differentiation // inferred from electronic annotation /// 0060644 // mammary gland epithelial cell differentiation // inferred from electronic annotation /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation","0000790 // nuclear chromatin // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from electronic annotation","0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0035259 // glucocorticoid receptor binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr20:48807356-48809209 (+) // 78.76 // q13.13"]
["11722015_at",1.26441,1.1573772,1.1443224,-1.1443224,-1.2183123,-1.2278881,0.00024662862,8.49711e-7,5.2254095,2.385544,5.2254095,"up","OLR1",4973,"0006508 // proteolysis // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007159 // leukocyte cell-cell adhesion // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008015 // blood circulation // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0042157 // lipoprotein metabolic process // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005041 // low-density lipoprotein receptor activity // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr12:10310899-10324802 (-) // 78.55 // p13.2"]
["11716665_s_at",-0.29059935,-0.30034637,-0.51047707,0.42693615,0.30929375,0.29059982,0.0020635107,0.0010504175,-1.6351438,-0.70941746,1.6351438,"down","GDF15",9518,"0007165 // signal transduction // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0005125 // cytokine activity // traceable author statement /// 0008083 // growth factor activity // inferred from electronic annotation","chr19:18496769-18499986 (+) // 92.72 // p13.11"]
["11725522_at",-0.32857704,-0.20198345,-0.24937868,0.24312496,0.3792143,0.20198345,0.0022333448,0.0011936179,-1.4486951,-0.5347539,1.4486951,"down","MESP1",55897,"0001947 // heart looping // inferred from sequence or structural similarity /// 0001947 // heart looping // inferred from electronic annotation /// 0003007 // heart morphogenesis // inferred from electronic annotation /// 0003139 // secondary heart field specification // inferred from sequence or structural similarity /// 0003139 // secondary heart field specification // inferred from electronic annotation /// 0003143 // embryonic heart tube morphogenesis // inferred from sequence or structural similarity /// 0003143 // embryonic heart tube morphogenesis // inferred from electronic annotation /// 0003210 // cardiac atrium formation // inferred from mutant phenotype /// 0003211 // cardiac ventricle formation // inferred from mutant phenotype /// 0003236 // sinus venosus morphogenesis // inferred from sequence or structural similarity /// 0003236 // sinus venosus morphogenesis // inferred from electronic annotation /// 0003241 // growth involved in heart morphogenesis // inferred from sequence or structural similarity /// 0003241 // growth involved in heart morphogenesis // inferred from electronic annotation /// 0003259 // cardioblast anterior-lateral migration // inferred from sequence or structural similarity /// 0003259 // cardioblast anterior-lateral migration // inferred from electronic annotation /// 0003260 // cardioblast migration // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007369 // gastrulation // inferred from sequence or structural similarity /// 0007369 // gastrulation // inferred from electronic annotation /// 0008078 // mesodermal cell migration // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from mutant phenotype /// 0023019 // signal transduction involved in regulation of gene expression // inferred from electronic annotation /// 0035481 // positive regulation of Notch signaling pathway involved in heart induction // inferred from electronic annotation /// 0042662 // negative regulation of mesodermal cell fate specification // inferred from sequence or structural similarity /// 0042662 // negative regulation of mesodermal cell fate specification // inferred from electronic annotation /// 0042664 // negative regulation of endodermal cell fate specification // inferred from sequence or structural similarity /// 0042664 // negative regulation of endodermal cell fate specification // inferred from electronic annotation /// 0045446 // endothelial cell differentiation // inferred from mutant phenotype /// 0045747 // positive regulation of Notch signaling pathway // inferred from sequence or structural similarity /// 0045747 // positive regulation of Notch signaling pathway // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048368 // lateral mesoderm development // inferred from sequence or structural similarity /// 0048368 // lateral mesoderm development // inferred from electronic annotation /// 0051155 // positive regulation of striated muscle cell differentiation // inferred from sequence or structural similarity /// 0051155 // positive regulation of striated muscle cell differentiation // inferred from electronic annotation /// 0055007 // cardiac muscle cell differentiation // inferred from mutant phenotype /// 0060913 // cardiac cell fate determination // inferred from sequence or structural similarity /// 0060913 // cardiac cell fate determination // inferred from electronic annotation /// 0060921 // sinoatrial node cell differentiation // inferred from mutant phenotype /// 0060947 // cardiac vascular smooth muscle cell differentiation // inferred from mutant phenotype /// 0060975 // cardioblast migration to the midline involved in heart field formation // inferred from sequence or structural similarity /// 0060975 // cardioblast migration to the midline involved in heart field formation // inferred from electronic annotation /// 0070368 // positive regulation of hepatocyte differentiation // inferred from sequence or structural similarity /// 0070368 // positive regulation of hepatocyte differentiation // inferred from electronic annotation /// 0090082 // positive regulation of heart induction by negative regulation of canonical Wnt receptor signaling pathway // inferred from sequence or structural similarity /// 0090082 // positive regulation of heart induction by negative regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0035326 // enhancer binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay","chr15:90291891-90294541 (-) // 86.66 // q26.1"]
["11753953_x_at",0.19851017,0.14413357,0.26030397,-0.1441338,-0.18957591,-0.23428345,0.0017807008,0.0007783423,1.3106782,0.39031363,1.3106782,"up","GLB1L",79411,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0043169 // cation binding // inferred from electronic annotation","chr2:220101327-220110194 (-) // 87.68 // q35"]
["11752563_a_at",0.29127073,0.35198975,0.43308306,-0.29371977,-0.2912712,-0.29535055,0.00084399927,9.211221e-5,1.5715938,0.65222836,1.5715938,"up","DZIP3",9666,"0000209 // protein polyubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019902 // phosphatase binding // inferred from direct assay /// 0031593 // polyubiquitin binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:108363244-108406940 (+) // 99.84 // q13.13"]
["11754473_a_at",0.78137684,0.58131075,0.6525426,-0.5813103,-0.8700118,-0.94430923,0.0012361597,0.00030116722,2.7707703,1.4702871,2.7707703,"up","CADM1",23705,"0001889 // liver development // inferred from electronic annotation /// 0001913 // T cell mediated cytotoxicity // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from sequence or structural similarity /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007157 // heterophilic cell-cell adhesion // inferred from sequence or structural similarity /// 0007157 // heterophilic cell-cell adhesion // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007416 // synapse assembly // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008037 // cell recognition // inferred from direct assay /// 0008037 // cell recognition // inferred from sequence or structural similarity /// 0008037 // cell recognition // inferred from electronic annotation /// 0009826 // unidimensional cell growth // inferred from electronic annotation /// 0016338 // calcium-independent cell-cell adhesion // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0042271 // susceptibility to natural killer cell mediated cytotoxicity // inferred from direct assay /// 0042271 // susceptibility to natural killer cell mediated cytotoxicity // inferred from sequence or structural similarity /// 0042271 // susceptibility to natural killer cell mediated cytotoxicity // inferred from electronic annotation /// 0045216 // cell-cell junction organization // traceable author statement /// 0045954 // positive regulation of natural killer cell mediated cytotoxicity // inferred from direct assay /// 0045954 // positive regulation of natural killer cell mediated cytotoxicity // inferred from sequence or structural similarity /// 0045954 // positive regulation of natural killer cell mediated cytotoxicity // inferred from electronic annotation /// 0050715 // positive regulation of cytokine secretion // inferred from direct assay /// 0050798 // activated T cell proliferation // inferred from direct assay /// 0051606 // detection of stimulus // inferred from direct assay /// 0051606 // detection of stimulus // inferred from sequence or structural similarity /// 0051606 // detection of stimulus // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from sequence or structural similarity /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from sequence or structural similarity /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005102 // receptor binding // inferred from physical interaction /// 0005102 // receptor binding // inferred from sequence or structural similarity /// 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from sequence or structural similarity /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from sequence or structural similarity /// 0030165 // PDZ domain binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0050839 // cell adhesion molecule binding // inferred from electronic annotation","chr11:115044348-115075482 (-) // 95.37 // q23.3"]
["11759383_at",-0.15814495,-0.20229578,-0.160223,0.15814495,0.22455597,0.28083897,0.0014867174,0.00049820443,-1.3147008,-0.39473456,1.3147008,"down","KRTAP20-2",337976,"","0005882 // intermediate filament // inferred from electronic annotation","","chr21:32007554-32007938 (+) // 100.0 // q22.11"]
["11745204_a_at",-0.200706,-0.2947216,-0.22962141,0.79507875,0.613379,0.20070648,0.013323822,0.011963897,-1.7148366,-0.7780711,1.7148366,"down","TPD52",7163,"0009653 // anatomical structure morphogenesis // traceable author statement /// 0030183 // B cell differentiation // inferred from expression pattern /// 0046903 // secretion // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay","chr8:80947748-81083793 (-) // 99.18 // q21.13"]
["11721055_x_at",-0.28010654,-0.2617445,-0.23989296,0.30202436,0.26127386,0.23989296,0.00055139343,1.662609e-5,-1.4422405,-0.5283117,1.4422405,"down","PRKX",5613,"0001525 // angiogenesis // inferred from mutant phenotype /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001935 // endothelial cell proliferation // inferred from mutant phenotype /// 0001935 // endothelial cell proliferation // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from mutant phenotype /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0030099 // myeloid cell differentiation // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030155 // regulation of cell adhesion // inferred from direct assay /// 0030334 // regulation of cell migration // inferred from direct assay /// 0031589 // cell-substrate adhesion // inferred from mutant phenotype /// 0043542 // endothelial cell migration // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0060562 // epithelial tube morphogenesis // inferred from direct assay /// 0060993 // kidney morphogenesis // inferred from direct assay /// 2000696 // regulation of epithelial cell differentiation involved in kidney development // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004691 // cAMP-dependent protein kinase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chrX:3522410-3631675 (-) // 82.73 // p22.33"]
["11720623_a_at",-0.2621708,-0.17635012,-0.24344063,0.33895636,0.23739862,0.1763506,0.0019091989,0.0009046913,-1.3930262,-0.47822237,1.3930262,"down","MYD88",4615,"0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002238 // response to molecule of fungal origin // inferred from electronic annotation /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007254 // JNK cascade // inferred from electronic annotation /// 0008063 // Toll signaling pathway // traceable author statement /// 0008063 // Toll signaling pathway // inferred from electronic annotation /// 0009615 // response to virus // inferred from electronic annotation /// 0016064 // immunoglobulin mediated immune response // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from electronic annotation /// 0032494 // response to peptidoglycan // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032740 // positive regulation of interleukin-17 production // inferred from sequence or structural similarity /// 0032740 // positive regulation of interleukin-17 production // inferred from electronic annotation /// 0032747 // positive regulation of interleukin-23 production // inferred from sequence or structural similarity /// 0032747 // positive regulation of interleukin-23 production // inferred from electronic annotation /// 0032755 // positive regulation of interleukin-6 production // inferred from sequence or structural similarity /// 0032755 // positive regulation of interleukin-6 production // inferred from electronic annotation /// 0032760 // positive regulation of tumor necrosis factor production // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0044130 // negative regulation of growth of symbiont in host // inferred from electronic annotation /// 0045080 // positive regulation of chemokine biosynthetic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0045351 // type I interferon biosynthetic process // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046330 // positive regulation of JNK cascade // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050671 // positive regulation of lymphocyte proliferation // inferred from electronic annotation /// 0050727 // regulation of inflammatory response // inferred from sequence or structural similarity /// 0050727 // regulation of inflammatory response // inferred from electronic annotation /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from electronic annotation /// 0070555 // response to interleukin-1 // inferred from mutant phenotype /// 0070935 // 3'-UTR-mediated mRNA stabilization // inferred from direct assay /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement","0005102 // receptor binding // inferred from electronic annotation /// 0005121 // Toll binding // inferred from electronic annotation /// 0005123 // death receptor binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0070976 // TIR domain binding // inferred from physical interaction","chr3:38179968-38184513 (+) // 94.78 // p22.2"]
["11727948_a_at",-0.36038065,-0.36046457,-0.2623086,0.2976675,0.44244003,0.26230812,0.0014854231,0.0004957807,-1.5821172,-0.6618565,1.5821172,"down","RAB28",9364,"0006184 // GTP catabolic process // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005525 // GTP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from electronic annotation /// 0019003 // GDP binding // inferred from direct assay","chr4:13369347-13485989 (-) // 98.8 // p15.33"]
["11751549_a_at",0.21471024,0.22216797,0.22931957,-0.24646568,-0.21471024,-0.38510132,0.0016444417,0.0006565019,1.4182957,0.5041584,1.4182957,"up","CD46",4179,"0006958 // complement activation, classical pathway // inferred from electronic annotation /// 0007338 // single fertilization // inferred from electronic annotation /// 0030449 // regulation of complement activation // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation","0002079 // inner acrosomal membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // non-traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0004872 // receptor activity // traceable author statement","chr1:207925430-207967467 (+) // 100.0 // q32.2"]
["11715639_a_at",0.1812725,0.15034103,0.18615627,-0.15034103,-0.1976347,-0.27766514,0.0016010772,0.0006029755,1.3023678,0.3811369,1.3023678,"up","TTC3P1","286495 /// 7267","0006511 // ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0010771 // negative regulation of cell morphogenesis involved in differentiation // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005773 // vacuole // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr21:38121747-38575408 (+) // 77.26 // q22.13"]
["11720850_a_at",0.33202553,0.1424532,0.24230385,-0.14245272,-0.19950104,-0.21579838,0.003161987,0.0019831702,1.3424282,0.42484492,1.3424282,"up","RAB23",51715,"0006810 // transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0008589 // regulation of smoothened signaling pathway // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0021513 // spinal cord dorsal/ventral patterning // inferred from electronic annotation /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0045861 // negative regulation of proteolysis // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr6:57053284-57087112 (-) // 99.16 // p11.2"]
["11719381_a_at",0.31513596,0.22164059,0.17986012,-0.20346737,-0.2761488,-0.17986012,0.0017462111,0.00074735825,1.374307,0.45870432,1.374307,"up","PSENEN",55851,"0006509 // membrane protein ectodomain proteolysis // inferred from direct assay /// 0006915 // apoptotic process // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007220 // Notch receptor processing // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0016485 // protein processing // inferred from direct assay /// 0031293 // membrane protein intracellular domain proteolysis // traceable author statement /// 0042987 // amyloid precursor protein catabolic process // traceable author statement /// 0043085 // positive regulation of catalytic activity // inferred from direct assay /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr19:36235992-36238417 (+) // 92.5 // q13.12"]
["11720377_s_at",-0.22002554,-0.25246286,-0.17939186,0.31102943,0.2320323,0.17939234,0.0014575268,0.00046826657,-1.3737423,-0.45811146,1.3737423,"down","SAP30L",79685,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:153825516-153840613 (+) // 90.35 // q33.2"]
["11717213_a_at",-1.0524626,-0.7798071,-0.92366695,0.8065376,0.93341637,0.7798071,0.0006942706,4.3952532e-5,-3.3836162,-1.7585659,3.3836162,"down","NSMAF",8439,"0006672 // ceramide metabolic process // traceable author statement /// 0007165 // signal transduction // traceable author statement","0005625 // soluble fraction // traceable author statement /// 0005737 // cytoplasm // traceable author statement","0005057 // receptor signaling protein activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr8:59496066-59572404 (-) // 96.84 // q12.1"]
["11755280_x_at",-0.15497208,-0.23638535,-0.24854374,0.15497303,0.17780495,0.19438457,0.0011684936,0.0002475878,-1.3095047,-0.38902125,1.3095047,"down","FTL",2512,"0001501 // skeletal system development // non-traceable author statement /// 0001503 // ossification // inferred from electronic annotation /// 0006826 // iron ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0006879 // cellular iron ion homeostasis // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006907 // pinocytosis // non-traceable author statement /// 0006953 // acute-phase response // inferred from direct assay /// 0008219 // cell death // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from electronic annotation /// 0030500 // regulation of bone mineralization // inferred from electronic annotation /// 0030500 // regulation of bone mineralization // non-traceable author statement /// 0030502 // negative regulation of bone mineralization // inferred from electronic annotation /// 0030502 // negative regulation of bone mineralization // inferred from sequence or structural similarity /// 0031100 // organ regeneration // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0042326 // negative regulation of phosphorylation // non-traceable author statement /// 0045780 // positive regulation of bone resorption // inferred from electronic annotation /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from electronic annotation /// 0046627 // negative regulation of insulin receptor signaling pathway // non-traceable author statement /// 0050727 // regulation of inflammatory response // inferred from mutant phenotype /// 0050766 // positive regulation of phagocytosis // inferred from direct assay /// 0055072 // iron ion homeostasis // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005576 // extracellular region // non-traceable author statement /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0008043 // intracellular ferritin complex // inferred from direct assay /// 0008043 // intracellular ferritin complex // traceable author statement /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0004869 // cysteine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from direct assay /// 0005506 // iron ion binding // traceable author statement /// 0008199 // ferric iron binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0019210 // kinase inhibitor activity // non-traceable author statement /// 0030294 // receptor signaling protein tyrosine kinase inhibitor activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046914 // transition metal ion binding // inferred from electronic annotation","chr19:49468573-49468867 (+) // 73.32 // q13.33"]
["11734453_at",0.35781956,0.24164581,0.15775585,-0.16729927,-0.23596382,-0.15775585,0.0034112982,0.0022242486,1.3560528,0.43941337,1.3560528,"up","C11orf86",254439,"","","","chr11:66742747-66744475 (+) // 91.01 // q13.2"]
["11719077_a_at",0.43571568,0.46932507,0.48081112,-0.5704975,-0.56649065,-0.43571568,0.0006216412,2.8716377e-5,1.98094,0.9861852,1.98094,"up","RPUSD4",84881,"0001522 // pseudouridine synthesis // inferred from electronic annotation /// 0009451 // RNA modification // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0009982 // pseudouridine synthase activity // inferred from electronic annotation","chr11:126071988-126081587 (-) // 84.78 // q24.2"]
["11717271_a_at",0.5489216,0.31508112,0.32107544,-0.3150816,-0.46008968,-0.39161348,0.0018693322,0.0008632889,1.7218438,0.7839543,1.7218438,"up","PRAME",23532,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0040008 // regulation of growth // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0045596 // negative regulation of cell differentiation // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0048387 // negative regulation of retinoic acid receptor signaling pathway // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0042974 // retinoic acid receptor binding // inferred from direct assay","chr22:22890122-22902176 (-) // 93.34 // q11.22"]
["11723684_a_at",-0.23007536,-0.21535254,-0.16047668,0.25132895,0.34968424,0.16047668,0.002569067,0.0014726219,-1.3715414,-0.45579815,1.3715414,"down","RPUSD2",27079,"0001522 // pseudouridine synthesis // inferred from electronic annotation /// 0009451 // RNA modification // inferred from electronic annotation","","0003723 // RNA binding // inferred from electronic annotation /// 0009982 // pseudouridine synthase activity // inferred from electronic annotation","chr15:40861491-40866891 (+) // 90.14 // q15.1"]
["11735341_s_at",-0.22746468,-0.17746449,-0.17800713,0.31664562,0.34915543,0.17746449,0.0020003177,0.0009992974,-1.3903042,-0.4754006,1.3903042,"down","TANC1",85461,"0008542 // visual learning // inferred from electronic annotation /// 0097062 // dendritic spine maintenance // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043679 // axon terminus // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","","chr2:159825145-160089168 (+) // 98.64 // q24.2"]
["11722307_at",-0.36067963,-0.3254552,-0.14556932,0.20762491,0.18334818,0.14556932,0.0039742477,0.002717961,-1.3718114,-0.45608217,1.3718114,"down","GLCE",26035,"0006024 // glycosaminoglycan biosynthetic process // inferred from electronic annotation /// 0015012 // heparan sulfate proteoglycan biosynthetic process // inferred from direct assay /// 0015012 // heparan sulfate proteoglycan biosynthetic process // inferred from electronic annotation /// 0015012 // heparan sulfate proteoglycan biosynthetic process // inferred from sequence or structural similarity /// 0030210 // heparin biosynthetic process // inferred from electronic annotation /// 0030210 // heparin biosynthetic process // inferred from sequence or structural similarity","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016853 // isomerase activity // inferred from electronic annotation /// 0016857 // racemase and epimerase activity, acting on carbohydrates and derivatives // inferred from sequence or structural similarity /// 0016857 // racemase and epimerase activity, acting on carbohydrates and derivatives // inferred from electronic annotation /// 0047464 // heparosan-N-sulfate-glucuronate 5-epimerase activity // inferred from mutant phenotype /// 0050379 // UDP-glucuronate 5'-epimerase activity // inferred from direct assay","chr15:69452972-69564546 (+) // 95.59 // q23"]
["11722244_at",-0.1952753,-0.27378368,-0.19857836,0.48962116,0.45844984,0.1952753,0.0046859384,0.0033701623,-1.519568,-0.60366124,1.519568,"down","TMEM27",57393,"0006508 // proteolysis // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008241 // peptidyl-dipeptidase activity // inferred from electronic annotation","chrX:15645337-15683153 (-) // 95.92 // p22.2"]
["11721237_a_at",-0.23396635,-0.18581963,-0.30016232,0.23013735,0.21737051,0.18581915,0.0011284781,0.00022501523,-1.3670744,-0.45109177,1.3670744,"down","LHFPL2",10184,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr5:77781052-77944648 (-) // 95.8 // q14.1"]
["11723420_s_at",0.6649647,0.61796284,0.5999346,-0.5999341,-0.7223549,-1.0598154,0.0014931919,0.00051316415,2.6789272,1.4216554,2.6789272,"up","BTF3L4",91408,"","","","chr1:52521801-52554585 (+) // 87.15 // p32.3"]
["11725747_a_at",0.14648533,0.13612652,0.17231941,-0.13612652,-0.34864712,-0.24141026,0.0045107757,0.0032051865,1.313763,0.39370507,1.313763,"up","ATP2C1",27032,"0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from direct assay /// 0006816 // calcium ion transport // inferred from mutant phenotype /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006828 // manganese ion transport // inferred from direct assay /// 0006874 // cellular calcium ion homeostasis // inferred from direct assay /// 0006874 // cellular calcium ion homeostasis // inferred from mutant phenotype /// 0007165 // signal transduction // inferred from mutant phenotype /// 0008152 // metabolic process // inferred from electronic annotation /// 0008544 // epidermis development // inferred from mutant phenotype /// 0016339 // calcium-dependent cell-cell adhesion // inferred from mutant phenotype /// 0030026 // cellular manganese ion homeostasis // inferred from direct assay /// 0031532 // actin cytoskeleton reorganization // inferred from mutant phenotype /// 0032468 // Golgi calcium ion homeostasis // inferred from mutant phenotype /// 0032472 // Golgi calcium ion transport // inferred from mutant phenotype /// 0034220 // ion transmembrane transport // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype /// 0055085 // transmembrane transport // traceable author statement","0000139 // Golgi membrane // inferred from direct assay /// 0000139 // Golgi membrane // traceable author statement /// 0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005388 // calcium-transporting ATPase activity // inferred from direct assay /// 0005388 // calcium-transporting ATPase activity // inferred from mutant phenotype /// 0005388 // calcium-transporting ATPase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0015410 // manganese-transporting ATPase activity // inferred from direct assay /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:130613433-130735556 (+) // 99.32 // q22.1"]
["11722902_a_at",-0.2755313,-0.3535943,-0.4037652,0.2755313,0.35343266,0.35478497,0.0009225327,0.00012310408,-1.5935156,-0.6722132,1.5935156,"down","TRMT13",54482,"0008033 // tRNA processing // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation","","0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:100598641-100616054 (+) // 88.34 // p21.2"]
["11740311_at",0.49372625,0.34635735,0.414639,-0.38161755,-0.3480692,-0.34635687,0.0007223185,6.09709e-5,1.7134714,0.7769221,1.7134714,"up","HAS2",3037,"0001822 // kidney development // inferred from sequence or structural similarity /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0030213 // hyaluronan biosynthetic process // inferred from direct assay /// 0030213 // hyaluronan biosynthetic process // inferred from electronic annotation /// 0030213 // hyaluronan biosynthetic process // inferred from mutant phenotype /// 0030213 // hyaluronan biosynthetic process // inferred from sequence or structural similarity /// 0035810 // positive regulation of urine volume // inferred from sequence or structural similarity /// 0036120 // cellular response to platelet-derived growth factor stimulus // inferred from direct assay /// 0070295 // renal water absorption // inferred from sequence or structural similarity /// 0071347 // cellular response to interleukin-1 // inferred from expression pattern /// 0071356 // cellular response to tumor necrosis factor // inferred from expression pattern /// 0071498 // cellular response to fluid shear stress // inferred from expression pattern /// 1900625 // positive regulation of monocyte aggregation // inferred from mutant phenotype /// 2000147 // positive regulation of cell motility // inferred from mutant phenotype","0005624 // membrane fraction // inferred from direct assay /// 0005625 // soluble fraction // inferred from direct assay /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016758 // transferase activity, transferring hexosyl groups // inferred from electronic annotation /// 0050501 // hyaluronan synthase activity // inferred from mutant phenotype /// 0050501 // hyaluronan synthase activity // inferred from sequence or structural similarity /// 0050501 // hyaluronan synthase activity // inferred from electronic annotation","chr8:122625149-122653659 (-) // 96.22 // q24.13"]
["11717436_a_at",-0.3326416,-0.51193714,-0.4304123,0.4034195,0.3326416,0.3652439,0.0009735221,0.00014218122,-1.7315915,-0.79209864,1.7315915,"down","CDCA7L",55536,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","","chr7:21940516-21985702 (-) // 92.81 // p15.3"]
["11717451_at",-0.40741348,-0.47431135,-0.31124973,0.67202663,0.59703255,0.31124973,0.0026042238,0.0015119822,-1.8979315,-0.92442787,1.8979315,"down","NEK7",140609,"0000910 // cytokinesis // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007346 // regulation of mitotic cell cycle // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0051225 // spindle assembly // traceable author statement","0000922 // spindle pole // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from sequence or structural similarity /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:198126109-198291550 (+) // 97.61 // q31.3"]
["11735984_at",0.26811075,0.18669987,0.28059626,-0.27714825,-0.18669987,-0.28473043,0.0012808557,0.00032919497,1.4089904,0.4946618,1.4089904,"up","OR2B6",26212,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr6:27925018-27925960 (+) // 99.16 // p22.1"]
["11758335_s_at",0.20035458,0.17126274,0.16778278,-0.16778278,-0.2961588,-0.19016647,0.0016183598,0.0006264919,1.3175302,0.39783603,1.3175302,"up","FDX1",2230,"0006091 // generation of precursor metabolites and energy // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0030325 // adrenal gland development // inferred from electronic annotation /// 0034698 // response to gonadotropin stimulus // inferred from electronic annotation /// 0044320 // cellular response to leptin stimulus // inferred from electronic annotation /// 0044321 // response to leptin stimulus // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051353 // positive regulation of oxidoreductase activity // inferred from electronic annotation /// 0070995 // NADPH oxidation // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0071872 // cellular response to epinephrine stimulus // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0030061 // mitochondrial crista // inferred from electronic annotation","0005506 // iron ion binding // inferred from electronic annotation /// 0005506 // iron ion binding // traceable author statement /// 0008386 // cholesterol monooxygenase (side-chain-cleaving) activity // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0009055 // electron carrier activity // traceable author statement /// 0015039 // NADPH-adrenodoxin reductase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation","chr11:110306581-110333510 (+) // 90.05 // q22.3"]
["11745234_a_at",0.20260096,0.19575214,0.19381762,-0.19381762,-0.34526825,-0.2707777,0.0014235608,0.00043712382,1.3825625,0.46734476,1.3825625,"up","PTPLAD2",401494,"0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016829 // lyase activity // inferred from electronic annotation","chr9:20995305-21029399 (-) // 74.97 // p21.3"]
["11728858_at",0.44945478,0.39391613,0.21308804,-0.2531371,-0.33647108,-0.21308851,0.0025946551,0.0015016296,1.5365754,0.61971855,1.5365754,"up","CEP19",84984,"","0000922 // spindle pole // inferred from direct assay /// 0000922 // spindle pole // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005814 // centriole // inferred from direct assay /// 0005814 // centriole // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","","chr3:196433148-196439159 (-) // 82.36 // q29"]
["11719522_at",0.3728366,0.13171387,0.25236034,-0.13171387,-0.20670652,-0.20865726,0.0055560446,0.0042113,1.3515949,0.43466282,1.3515949,"up","SEMA5A",9037,"0001569 // patterning of blood vessels // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0008046 // axon guidance receptor activity // inferred from electronic annotation","chr5:9035141-9546233 (-) // 95.93 // p15.31"]
["11737052_x_at",-0.1911583,-0.18875885,-0.13781357,0.26987553,0.30016518,0.13781357,0.0025946551,0.0015018159,-1.3273312,-0.40852833,1.3273312,"down","PLAGL1",5325,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0007050 // cell cycle arrest // traceable author statement /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:144261436-144385735 (-) // 92.22 // q24.2"]
["11721860_s_at",-0.23335457,-0.22442245,-0.1620884,0.3467455,0.29439688,0.1620884,0.0023907758,0.0013279078,-1.389307,-0.4743654,1.389307,"down","STX12",23673,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0033344 // cholesterol efflux // inferred from direct assay /// 0050821 // protein stabilization // inferred from direct assay","0000139 // Golgi membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay /// 0045335 // phagocytic vesicle // inferred from direct assay","0005484 // SNAP receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:28099663-28150962 (+) // 91.29 // p35.3"]
["11716504_x_at",0.6169543,0.31873035,0.33745003,-0.34478664,-0.46713352,-0.31873083,0.0028132095,0.0016852017,1.7426248,0.8012619,1.7426248,"up","CRMP1",1400,"0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0006208 // pyrimidine base catabolic process // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007411 // axon guidance // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0004157 // dihydropyrimidinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016810 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds // inferred from electronic annotation /// 0016812 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides // inferred from electronic annotation","chr4:5822513-5894811 (-) // 95.2 // p16.2"]
["11723806_at",0.1752553,0.27020788,0.19591284,-0.48191833,-0.17525578,-0.2901473,0.006206978,0.004881112,1.4434947,0.5295658,1.4434947,"up","STX17",55014,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005484 // SNAP receptor activity // inferred from electronic annotation","chr9:102668943-102736364 (+) // 72.98 // q31.1"]
["11715545_at",-0.18973255,-0.34687805,-0.23703194,0.2821722,0.27485657,0.18973255,0.0017807181,0.0007814607,-1.4208963,-0.50680125,1.4208963,"down","TMED10",10972,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from direct assay /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // inferred from sequence or structural similarity /// 0007030 // Golgi organization // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0034205 // beta-amyloid formation // inferred from mutant phenotype /// 0035459 // cargo loading into vesicle // traceable author statement /// 0035964 // COPI-coated vesicle budding // inferred from direct assay /// 0045055 // regulated secretory pathway // inferred from sequence or structural similarity /// 0045055 // regulated secretory pathway // inferred from electronic annotation /// 0048199 // vesicle targeting, to, from or within Golgi // inferred from sequence or structural similarity /// 0048199 // vesicle targeting, to, from or within Golgi // inferred from electronic annotation /// 0048205 // COPI coating of Golgi vesicle // traceable author statement /// 0048208 // COPII vesicle coating // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from sequence or structural similarity /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005801 // cis-Golgi network // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from sequence or structural similarity /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030137 // COPI-coated vesicle // inferred from sequence or structural similarity /// 0030140 // trans-Golgi network transport vesicle // inferred from sequence or structural similarity /// 0030658 // transport vesicle membrane // inferred from electronic annotation /// 0030667 // secretory granule membrane // inferred from sequence or structural similarity /// 0030667 // secretory granule membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0042589 // zymogen granule membrane // inferred from sequence or structural similarity /// 0042589 // zymogen granule membrane // inferred from electronic annotation /// 0070765 // gamma-secretase complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr14:75598171-75643349 (-) // 65.49 // q24.3"]
["11748338_a_at",-0.19425106,-0.17606258,-0.13563871,0.13563919,0.2984743,0.46483564,0.009849337,0.008352,-1.3834788,-0.46830052,1.3834788,"down","SLC31A2",1318,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006825 // copper ion transport // traceable author statement /// 0006825 // copper ion transport // inferred from electronic annotation /// 0035434 // copper ion transmembrane transport // traceable author statement /// 0035434 // copper ion transmembrane transport // inferred from electronic annotation","0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005375 // copper ion transmembrane transporter activity // inferred from electronic annotation /// 0005375 // copper ion transmembrane transporter activity // traceable author statement","chr9:115913255-115924525 (+) // 76.1 // q32"]
["11716662_at",-0.20666075,-0.20656872,-0.20350075,0.32057,0.38194466,0.20350075,0.0016202792,0.00063340296,-1.4216653,-0.5075819,1.4216653,"down","KIAA0247",9766,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr14:70078312-70181859 (+) // 97.56 // q24.1"]
["11748141_a_at",0.25384712,0.23481083,0.17854404,-0.29143047,-0.2612524,-0.17854404,0.0012808557,0.0003289946,1.3814113,0.46614295,1.3814113,"up","CRIP2",1397,"0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from electronic annotation","0031012 // extracellular matrix // inferred from direct assay","0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:105939298-105946031 (+) // 99.91 // q32.33"]
["11722929_a_at",-0.6001129,-0.6666994,-0.5017142,0.6228838,0.50171375,0.536355,0.0006943628,4.4579963e-5,-2.208642,-1.1431596,2.208642,"down","CNKSR3",154043,"0009966 // regulation of signal transduction // inferred from electronic annotation /// 0010765 // positive regulation of sodium ion transport // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation /// 0033137 // negative regulation of peptidyl-serine phosphorylation // inferred from sequence or structural similarity /// 0070373 // negative regulation of ERK1 and ERK2 cascade // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation","chr6:154726293-154831803 (-) // 99.77 // q25.2"]
["11722235_a_at",0.2946663,0.3756361,0.26677132,-0.26677132,-0.39455223,-0.29889488,0.0011428653,0.00023182151,1.5501746,0.6324307,1.5501746,"up","FBXO2",26232,"0006464 // cellular protein modification process // traceable author statement /// 0006508 // proteolysis // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006516 // glycoprotein catabolic process // inferred from sequence or structural similarity /// 0006516 // glycoprotein catabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from sequence or structural similarity /// 0016567 // protein ubiquitination // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030163 // protein catabolic process // inferred from electronic annotation /// 0030433 // ER-associated protein catabolic process // inferred from electronic annotation /// 0031146 // SCF-dependent proteasomal ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0031146 // SCF-dependent proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0031396 // regulation of protein ubiquitination // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019005 // SCF ubiquitin ligase complex // inferred from sequence or structural similarity /// 0019005 // SCF ubiquitin ligase complex // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation","0001540 // beta-amyloid binding // inferred from electronic annotation /// 0001948 // glycoprotein binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr1:11708417-11714890 (-) // 83.32 // p36.22"]
["11719934_a_at",-0.37328243,-0.36644173,-0.26345253,0.5978699,0.2903247,0.263453,0.00444491,0.0031397163,-1.6452134,-0.7182747,1.6452134,"down","TKT",7086,"0005975 // carbohydrate metabolic process // traceable author statement /// 0005999 // xylulose biosynthetic process // traceable author statement /// 0006098 // pentose-phosphate shunt // traceable author statement /// 0006098 // pentose-phosphate shunt // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009052 // pentose-phosphate shunt, non-oxidative branch // non-traceable author statement /// 0009052 // pentose-phosphate shunt, non-oxidative branch // inferred from electronic annotation /// 0040008 // regulation of growth // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046166 // glyceraldehyde-3-phosphate biosynthetic process // inferred from direct assay /// 0046390 // ribose phosphate biosynthetic process // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000287 // magnesium ion binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004802 // transketolase activity // not recorded /// 0004802 // transketolase activity // inferred from direct assay /// 0004802 // transketolase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030976 // thiamine pyrophosphate binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048029 // monosaccharide binding // inferred from electronic annotation /// 0048037 // cofactor binding // inferred from direct assay","chr3:53258730-53290068 (-) // 93.48 // p21.1"]
["11762249_a_at",-0.3273139,-0.6754155,-0.6341834,0.3273139,0.43867064,0.42919254,0.0022608375,0.001218048,-1.9238948,-0.9440299,1.9238948,"down","RPF2",84154,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation","","chr6:111303250-111347962 (+) // 99.53 // q21"]
["11723747_a_at",0.22437954,0.21201515,0.17958641,-0.17958641,-0.22910023,-0.26440716,0.00088391156,0.00010506442,1.3469456,0.4296916,1.3469456,"up","FAM64A",54478,"","0005730 // nucleolus // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr17:6347758-6354780 (+) // 95.58 // p13.2"]
["11746180_a_at",-0.18774223,-0.2370758,-0.20175362,0.37166786,0.37248135,0.18774319,0.0022323814,0.0011921417,-1.4334465,-0.51948804,1.4334465,"down","CD55",1604,"0006958 // complement activation, classical pathway // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from direct assay /// 0030449 // regulation of complement activation // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0045730 // respiratory burst // non-traceable author statement","0005576 // extracellular region // traceable author statement /// 0005625 // soluble fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay","0004872 // receptor activity // inferred from electronic annotation","chr1:207495077-207533846 (+) // 96.56 // q32.2"]
["11723930_at",-0.28755713,-0.22108269,-0.22111607,0.22135687,0.30557632,0.22108269,0.001006007,0.00016160232,-1.4069691,-0.4925906,1.4069691,"down","CCT5",22948,"0006457 // protein folding // traceable author statement /// 0006457 // protein folding // inferred from electronic annotation /// 0009615 // response to virus // inferred from expression pattern /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044267 // cellular protein metabolic process // inferred from electronic annotation /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement","0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005832 // chaperonin-containing T-complex // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr5:10250281-10267258 (+) // 89.37 // p15.2"]
["11728834_x_at",-0.24609518,-0.22698355,-0.16614914,0.19108534,0.1742754,0.16614914,0.0008700153,0.00010143993,-1.3106167,-0.3902459,1.3106167,"down","C4orf32",132720,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr4:113066522-113110237 (+) // 91.55 // q25"]
["11736543_at",0.14648819,0.16035652,0.102412224,-0.44977856,-0.102412224,-0.26735306,0.017146295,0.015831893,1.3283178,0.40960026,1.3283178,"up","C9orf41",138199,"","","","chr9:77595713-77643393 (-) // 95.01 // q21.13"]
["11729621_at",0.25217247,0.20200777,0.31594658,-0.26279116,-0.2020073,-0.41680288,0.002664289,0.001565069,1.4646704,0.5505761,1.4646704,"up","CLCN4",1183,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from direct assay /// 0006821 // chloride transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005768 // endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005247 // voltage-gated chloride channel activity // inferred from electronic annotation /// 0005247 // voltage-gated chloride channel activity // traceable author statement /// 0005254 // chloride channel activity // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0015297 // antiporter activity // inferred from electronic annotation","chrX:10124872-10205705 (+) // 94.17 // p22.2"]
["11729229_at",0.44968605,0.24940538,0.27865505,-0.35547972,-0.41549015,-0.2494049,0.0021139982,0.0010897743,1.5867121,0.6660404,1.5867121,"up","KLF3",51274,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:38665803-38703134 (+) // 98.12 // p14"]
["11717903_s_at",0.4481449,0.49370193,0.4868803,-0.4481449,-0.5146074,-0.6554203,0.00083066477,8.514135e-5,2.02179,1.0156332,2.02179,"up","IER3IP1",51124,"0042981 // regulation of apoptotic process // inferred from mutant phenotype","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr18:44681412-44702735 (-) // 93.75 // q21.1"]
["11757835_s_at",-0.24746513,-0.36665916,-0.30658245,0.71076584,0.47547913,0.24746561,0.0060592825,0.0047336514,-1.7228603,-0.7848058,1.7228603,"down","CPEB4",80315,"","","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr5:173385101-173385693 (+) // 91.47 // q35.2"]
["11733304_x_at",-0.46889973,-0.8816309,-0.6241269,0.63044643,0.46889973,0.62886524,0.0017193909,0.0007230725,-2.3526547,-1.2342896,2.3526547,"down","ZMAT3",64393,"0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0040008 // regulation of growth // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:178741516-178790067 (-) // 86.9 // q26.32"]
["11718181_s_at",-0.16207123,-0.2308693,-0.17381573,0.21857738,0.20202732,0.16207123,0.0009735221,0.00014464476,-1.304181,-0.38314408,1.304181,"down","FERMT2",10979,"0007155 // cell adhesion // non-traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // non-traceable author statement /// 0034329 // cell junction assembly // traceable author statement","0001725 // stress fiber // non-traceable author statement /// 0001725 // stress fiber // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation","chr14:53323988-53417862 (-) // 95.37 // q22.1"]
["11746863_x_at",0.4979515,0.090081215,0.2574334,-0.14765215,-0.134933,-0.090081215,0.028624086,0.027440662,1.3250476,0.4060442,1.3250476,"up","ARSJ",79642,"0008152 // metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004065 // arylsulfatase activity // traceable author statement /// 0008484 // sulfuric ester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:114821399-114900857 (-) // 93.05 // q26"]
["11719510_at",-0.11966419,-0.08834505,-0.13962889,0.5225458,0.42213535,0.088344574,0.026473869,0.025253927,-1.3757528,-0.4602213,1.3757528,"down","HELZ",9931,"","0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:65066559-65242105 (-) // 94.74 // q24.2"]
["11727713_at",0.19433784,0.24052525,0.22576714,-0.37357044,-0.19433784,-0.21187973,0.0022579338,0.0012125941,1.3948784,0.4801394,1.3948784,"up","KCNJ12","100653095 /// 3768","0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // traceable author statement /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0008015 // blood circulation // non-traceable author statement /// 0008016 // regulation of heart contraction // traceable author statement /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030315 // T-tubule // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005242 // inward rectifier potassium channel activity // inferred from electronic annotation /// 0005242 // inward rectifier potassium channel activity // inferred from direct assay /// 0005242 // inward rectifier potassium channel activity // traceable author statement /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0008200 // ion channel inhibitor activity // traceable author statement /// 0015459 // potassium channel regulator activity // traceable author statement /// 0030165 // PDZ domain binding // inferred from electronic annotation","chr17:21279508-21323181 (+) // 97.8 // p11.2"]
["11743688_at",-0.27278948,-0.26781225,-0.33360624,0.39573765,0.26781178,0.31908035,0.0009526495,0.00013251757,-1.5357528,-0.61894596,1.5357528,"down","GLI2",2736,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0001501 // skeletal system development // inferred from electronic annotation /// 0001501 // skeletal system development // inferred from sequence or structural similarity /// 0001649 // osteoblast differentiation // inferred from direct assay /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001822 // kidney development // inferred from sequence or structural similarity /// 0002009 // morphogenesis of an epithelium // inferred from electronic annotation /// 0002076 // osteoblast development // inferred from electronic annotation /// 0002076 // osteoblast development // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007224 // smoothened signaling pathway // inferred from direct assay /// 0007224 // smoothened signaling pathway // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from sequence or structural similarity /// 0007389 // pattern specification process // inferred from electronic annotation /// 0007411 // axon guidance // inferred from electronic annotation /// 0007411 // axon guidance // inferred from sequence or structural similarity /// 0007418 // ventral midline development // inferred from sequence or structural similarity /// 0007418 // ventral midline development // inferred from electronic annotation /// 0007442 // hindgut morphogenesis // inferred from electronic annotation /// 0007442 // hindgut morphogenesis // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from electronic annotation /// 0007507 // heart development // inferred from sequence or structural similarity /// 0008283 // cell proliferation // inferred from direct assay /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008589 // regulation of smoothened signaling pathway // inferred from electronic annotation /// 0009913 // epidermal cell differentiation // inferred from direct assay /// 0009953 // dorsal/ventral pattern formation // inferred from electronic annotation /// 0009954 // proximal/distal pattern formation // inferred from sequence or structural similarity /// 0021508 // floor plate formation // inferred from electronic annotation /// 0021508 // floor plate formation // inferred from sequence or structural similarity /// 0021513 // spinal cord dorsal/ventral patterning // inferred from sequence or structural similarity /// 0021513 // spinal cord dorsal/ventral patterning // inferred from electronic annotation /// 0021517 // ventral spinal cord development // inferred from sequence or structural similarity /// 0021517 // ventral spinal cord development // inferred from electronic annotation /// 0021696 // cerebellar cortex morphogenesis // inferred from electronic annotation /// 0021696 // cerebellar cortex morphogenesis // inferred from sequence or structural similarity /// 0021775 // smoothened signaling pathway involved in ventral spinal cord interneuron specification // inferred from electronic annotation /// 0021775 // smoothened signaling pathway involved in ventral spinal cord interneuron specification // inferred from sequence or structural similarity /// 0021776 // smoothened signaling pathway involved in spinal cord motor neuron cell fate specification // inferred from electronic annotation /// 0021904 // dorsal/ventral neural tube patterning // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0021938 // smoothened signaling pathway involved in regulation of cerebellar granule cell precursor cell proliferation // inferred from electronic annotation /// 0021965 // spinal cord ventral commissure morphogenesis // inferred from electronic annotation /// 0021965 // spinal cord ventral commissure morphogenesis // inferred from sequence or structural similarity /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030324 // lung development // inferred from sequence or structural similarity /// 0030879 // mammary gland development // inferred from sequence or structural similarity /// 0030879 // mammary gland development // inferred from electronic annotation /// 0030902 // hindbrain development // inferred from sequence or structural similarity /// 0030902 // hindbrain development // inferred from electronic annotation /// 0032331 // negative regulation of chondrocyte differentiation // inferred from electronic annotation /// 0033089 // positive regulation of T cell differentiation in thymus // inferred from sequence or structural similarity /// 0035295 // tube development // inferred from sequence or structural similarity /// 0035295 // tube development // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from sequence or structural similarity /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048566 // embryonic digestive tract development // inferred from electronic annotation /// 0048566 // embryonic digestive tract development // inferred from sequence or structural similarity /// 0048589 // developmental growth // inferred from electronic annotation /// 0048589 // developmental growth // inferred from sequence or structural similarity /// 0048646 // anatomical structure formation involved in morphogenesis // inferred from electronic annotation /// 0048666 // neuron development // inferred from sequence or structural similarity /// 0048666 // neuron development // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from sequence or structural similarity /// 0048856 // anatomical structure development // inferred from electronic annotation /// 0060032 // notochord regression // inferred from electronic annotation /// 0060322 // head development // inferred from electronic annotation /// 0060513 // prostatic bud formation // inferred from electronic annotation /// 0060603 // mammary gland duct morphogenesis // inferred from electronic annotation /// 0060831 // smoothened signaling pathway involved in dorsal/ventral neural tube patterning // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0090103 // cochlea morphogenesis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0031512 // motile primary cilium // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:121554865-121750228 (+) // 98.17 // q14.2"]
["11757445_s_at",-0.16317844,-0.17976952,-0.2539072,0.35598564,0.23886585,0.16317844,0.003135014,0.0019617465,-1.3675829,-0.45162836,1.3675829,"down","PTEN",5728,"0000079 // regulation of cyclin-dependent protein kinase activity // traceable author statement /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001933 // negative regulation of protein phosphorylation // inferred from direct assay /// 0002902 // regulation of B cell apoptotic process // inferred from electronic annotation /// 0006470 // protein dephosphorylation // inferred from direct assay /// 0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from sequence or structural similarity /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0007092 // activation of mitotic anaphase-promoting complex activity // inferred from direct assay /// 0007092 // activation of mitotic anaphase-promoting complex activity // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007270 // neuron-neuron synaptic transmission // inferred from sequence or structural similarity /// 0007399 // nervous system development // inferred from electronic annotation /// 0007416 // synapse assembly // inferred from sequence or structural similarity /// 0007417 // central nervous system development // inferred from sequence or structural similarity /// 0007417 // central nervous system development // inferred from electronic annotation /// 0007507 // heart development // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from electronic annotation /// 0007611 // learning or memory // inferred from sequence or structural similarity /// 0007626 // locomotory behavior // inferred from sequence or structural similarity /// 0008283 // cell proliferation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from sequence or structural similarity /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0010975 // regulation of neuron projection development // inferred from sequence or structural similarity /// 0010975 // regulation of neuron projection development // inferred from electronic annotation /// 0014067 // negative regulation of phosphatidylinositol 3-kinase cascade // traceable author statement /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0016477 // cell migration // inferred from sequence or structural similarity /// 0016477 // cell migration // inferred from electronic annotation /// 0021542 // dentate gyrus development // inferred from sequence or structural similarity /// 0021955 // central nervous system neuron axonogenesis // inferred from sequence or structural similarity /// 0030336 // negative regulation of cell migration // inferred from mutant phenotype /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0031647 // regulation of protein stability // inferred from mutant phenotype /// 0031647 // regulation of protein stability // inferred from electronic annotation /// 0031658 // negative regulation of cyclin-dependent protein kinase activity involved in G1/S // inferred from direct assay /// 0032286 // central nervous system myelin maintenance // inferred from sequence or structural similarity /// 0032535 // regulation of cellular component size // inferred from sequence or structural similarity /// 0033032 // regulation of myeloid cell apoptotic process // inferred from electronic annotation /// 0033555 // multicellular organismal response to stress // inferred from sequence or structural similarity /// 0035176 // social behavior // inferred from sequence or structural similarity /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from direct assay /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043491 // protein kinase B signaling cascade // inferred from sequence or structural similarity /// 0043491 // protein kinase B signaling cascade // inferred from electronic annotation /// 0043542 // endothelial cell migration // inferred from electronic annotation /// 0045475 // locomotor rhythm // inferred from sequence or structural similarity /// 0045792 // negative regulation of cell size // inferred from sequence or structural similarity /// 0046621 // negative regulation of organ growth // inferred from sequence or structural similarity /// 0046855 // inositol phosphate dephosphorylation // inferred from direct assay /// 0046855 // inositol phosphate dephosphorylation // inferred from electronic annotation /// 0046856 // phosphatidylinositol dephosphorylation // inferred from direct assay /// 0046856 // phosphatidylinositol dephosphorylation // inferred from mutant phenotype /// 0046856 // phosphatidylinositol dephosphorylation // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048738 // cardiac muscle tissue development // inferred from electronic annotation /// 0048853 // forebrain morphogenesis // inferred from sequence or structural similarity /// 0048854 // brain morphogenesis // inferred from sequence or structural similarity /// 0050680 // negative regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050771 // negative regulation of axonogenesis // inferred from sequence or structural similarity /// 0050821 // protein stabilization // inferred from direct assay /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0051895 // negative regulation of focal adhesion assembly // inferred from mutant phenotype /// 0051895 // negative regulation of focal adhesion assembly // inferred from electronic annotation /// 0051898 // negative regulation of protein kinase B signaling cascade // inferred from mutant phenotype /// 0051898 // negative regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0060024 // rhythmic synaptic transmission // inferred from sequence or structural similarity /// 0060070 // canonical Wnt receptor signaling pathway // inferred from direct assay /// 0060074 // synapse maturation // inferred from sequence or structural similarity /// 0060134 // prepulse inhibition // inferred from sequence or structural similarity /// 0060736 // prostate gland growth // inferred from electronic annotation /// 0060997 // dendritic spine morphogenesis // inferred from sequence or structural similarity /// 0061002 // negative regulation of dendritic spine morphogenesis // inferred from sequence or structural similarity /// 0090344 // negative regulation of cell aging // inferred from electronic annotation /// 0090394 // negative regulation of excitatory postsynaptic membrane potential // inferred from sequence or structural similarity /// 0097105 // presynaptic membrane assembly // inferred from sequence or structural similarity /// 0097107 // postsynaptic density assembly // inferred from sequence or structural similarity /// 2000060 // positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from direct assay /// 2000134 // negative regulation of G1/S transition of mitotic cell cycle // inferred from direct assay /// 2000463 // positive regulation of excitatory postsynaptic membrane potential // inferred from sequence or structural similarity /// 2000808 // negative regulation of synaptic vesicle clustering // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0009898 // internal side of plasma membrane // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation /// 0019717 // synaptosome // inferred from sequence or structural similarity /// 0019717 // synaptosome // inferred from electronic annotation /// 0035749 // myelin sheath adaxonal region // inferred from sequence or structural similarity /// 0035749 // myelin sheath adaxonal region // inferred from electronic annotation /// 0042995 // cell projection // inferred from direct assay /// 0043005 // neuron projection // inferred from sequence or structural similarity /// 0043220 // Schmidt-Lanterman incisure // inferred from sequence or structural similarity /// 0043220 // Schmidt-Lanterman incisure // inferred from electronic annotation","0000287 // magnesium ion binding // inferred from electronic annotation /// 0004438 // phosphatidylinositol-3-phosphatase activity // inferred from direct assay /// 0004721 // phosphoprotein phosphatase activity // inferred from direct assay /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0010997 // anaphase-promoting complex binding // inferred from physical interaction /// 0016314 // phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity // inferred from direct assay /// 0016314 // phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity // traceable author statement /// 0016314 // phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from physical interaction /// 0030165 // PDZ domain binding // inferred from electronic annotation /// 0051717 // inositol-1,3,4,5-tetrakisphosphate 3-phosphatase activity // inferred from direct assay /// 0051800 // phosphatidylinositol-3,4-bisphosphate 3-phosphatase activity // inferred from direct assay /// 0051800 // phosphatidylinositol-3,4-bisphosphate 3-phosphatase activity // inferred from electronic annotation","chr10:89728039-89728532 (+) // 92.5 // q23.31"]
["11716707_a_at",0.58847237,0.6795702,0.5777044,-0.70649195,-0.5777044,-0.6483693,0.0005467525,1.3945054e-5,2.394024,1.2594376,2.394024,"up","ARL2BP",23568,"0007165 // signal transduction // traceable author statement /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from mutant phenotype /// 0051457 // maintenance of protein location in nucleus // inferred from mutant phenotype","0005634 // nucleus // inferred from mutant phenotype /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from direct assay /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay","0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0005083 // small GTPase regulator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr16:57279009-57287547 (+) // 95.14 // q13"]
["11748456_a_at",0.13460398,0.16226912,0.20314312,-0.13460398,-0.3554926,-0.21416664,0.005381051,0.004029995,1.3208132,0.40142646,1.3208132,"up","MCF2L",23263,"0006915 // apoptotic process // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0005545 // 1-phosphatidylinositol binding // inferred from electronic annotation","chr13:113656027-113751224 (+) // 99.86 // q34"]
["11736443_x_at",-0.22831249,-0.1599679,-0.26260233,0.48764753,0.1599679,0.29980755,0.007295517,0.005891083,-1.4467028,-0.5327686,1.4467028,"down","SPINK7",84651,"0010466 // negative regulation of peptidase activity // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr5:147691989-147695479 (+) // 95.8 // q32"]
["11744800_x_at",-0.1266694,-0.101558685,-0.10117197,0.5520029,0.2661276,0.10117197,0.03553473,0.034377225,-1.3344398,-0.41623417,1.3344398,"down","FLT3LG",2323,"0007165 // signal transduction // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0035162 // embryonic hemopoiesis // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005625 // soluble fraction // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005102 // receptor binding // traceable author statement /// 0005125 // cytokine activity // inferred from electronic annotation","chr19:49977842-49989487 (+) // 83.95 // q13.33"]
["11736666_a_at",-0.53512526,-0.43800688,-0.37785673,0.4194908,0.5542946,0.3778572,0.0011069006,0.00021308553,-1.867201,-0.9008772,1.867201,"down","PTER",9317,"0009056 // catabolic process // inferred from electronic annotation","","0003723 // RNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:16478963-16555736 (+) // 94.0 // p13"]
["11758563_at",0.4498062,0.4444208,0.3062234,-0.30622292,-0.416533,-0.4025979,0.0010771177,0.00018612259,1.711508,0.7752681,1.711508,"up","LOC100506290","100506290 /// 100653153 /// 151194","0032259 // methylation // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr2:208477464-208477880 (-) // 98.81 // q33.3"]
["11754296_a_at",-0.17719269,-0.4233451,-0.5055046,0.21939373,0.23551273,0.17719269,0.0057820277,0.00443737,-1.4942075,-0.5793805,1.4942075,"down","AEN",64782,"0006915 // apoptotic process // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0010212 // response to ionizing radiation // inferred from direct assay /// 0042771 // DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis // inferred from direct assay /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred from direct assay /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr15:89169370-89175512 (+) // 90.63 // q26.1"]
["11722833_a_at",0.5262699,0.2893648,0.12721348,-0.12721395,-0.2027545,-0.17945194,0.016152874,0.014824191,1.3987029,0.48408955,1.3987029,"up","CCNY",219771,"0000079 // regulation of cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0000086 // G2/M transition of mitotic cell cycle // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0045737 // positive regulation of cyclin-dependent protein kinase activity // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation /// 0060828 // regulation of canonical Wnt receptor signaling pathway // inferred from direct assay","0000308 // cytoplasmic cyclin-dependent protein kinase holoenzyme complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0016538 // cyclin-dependent protein kinase regulator activity // inferred from direct assay /// 0019901 // protein kinase binding // inferred from electronic annotation","chr10:35625801-35860854 (+) // 97.78 // p11.21"]
["11732140_at",-0.25228596,-0.35043907,-0.14784908,0.1624484,0.14784908,0.20749187,0.003512565,0.0023008662,-1.3405154,-0.42278782,1.3405154,"down","COX16","100529257 /// 51241","","0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","","chr14:70791798-70826448 (-) // 78.09 // q24.2"]
["11754593_x_at",0.2062521,0.28200817,0.34986115,-0.29603004,-0.22319603,-0.2062521,0.001459056,0.00047059942,1.4351482,0.5211998,1.4351482,"up","TUBB3",10381,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0007017 // microtubule-based process // inferred from electronic annotation /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007411 // axon guidance // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0051258 // protein polymerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004977 // melanocortin receptor activity // inferred from electronic annotation /// 0004980 // melanocyte-stimulating hormone receptor activity // inferred from electronic annotation /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr16:89989752-90002482 (+) // 93.83 // q24.3"]
["11720486_a_at",0.22411442,0.1608901,0.22718811,-0.22520447,-0.1608901,-0.1863308,0.0010019254,0.00015893491,1.3148267,0.39487267,1.3148267,"up","SENP2",59343,"0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0009950 // dorsal/ventral axis specification // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016926 // protein desumoylation // inferred from sequence or structural similarity /// 0016926 // protein desumoylation // inferred from electronic annotation /// 0030111 // regulation of Wnt receptor signaling pathway // non-traceable author statement /// 0032091 // negative regulation of protein binding // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation /// 0051246 // regulation of protein metabolic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from direct assay /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016605 // PML body // inferred from sequence or structural similarity /// 0016605 // PML body // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016929 // SUMO-specific protease activity // inferred from direct assay /// 0016929 // SUMO-specific protease activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation","chr3:185303961-185348889 (+) // 97.37 // q27.2"]
["11748167_a_at",0.46921825,0.36463547,0.32526684,-0.32526684,-0.5752864,-0.64835453,0.0020938502,0.0010748792,1.8695307,0.9026761,1.8695307,"up","FAM227A",646851,"","","","chr22:38981999-39052308 (-) // 96.35 // q13.1"]
["11733891_at",-0.40320778,-0.29068995,-0.4224515,0.57156086,0.3411436,0.29069042,0.0023178372,0.0012757089,-1.7091134,-0.7732481,1.7091134,"down","FKBP14",55033,"0000413 // protein peptidyl-prolyl isomerization // not recorded /// 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006457 // protein folding // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0018208 // peptidyl-proline modification // not recorded /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation /// 0016020 // membrane // not recorded","0003755 // peptidyl-prolyl cis-trans isomerase activity // not recorded /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005528 // FK506 binding // not recorded /// 0016853 // isomerase activity // inferred from electronic annotation","chr7:30051416-30066417 (-) // 69.04 // p14.3"]
["11748693_a_at",0.38355732,0.30568886,0.23315334,-0.24377918,-0.23315334,-0.33435345,0.001415604,0.00043224083,1.4926699,0.57789516,1.4926699,"up","RAB5A",5868,"0006184 // GTP catabolic process // inferred from direct assay /// 0006184 // GTP catabolic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from direct assay /// 0006897 // endocytosis // inferred from electronic annotation /// 0006897 // endocytosis // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045921 // positive regulation of exocytosis // inferred from mutant phenotype /// 0051489 // regulation of filopodium assembly // inferred from direct assay /// 2000286 // receptor internalization involved in canonical Wnt receptor signaling pathway // inferred from mutant phenotype","0001726 // ruffle // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005769 // early endosome // inferred from electronic annotation /// 0005769 // early endosome // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0003924 // GTPase activity // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from electronic annotation /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0019003 // GDP binding // inferred from direct assay","chr3:19988896-20025942 (+) // 99.17 // p24.3"]
["11720306_at",0.4524231,0.38371754,0.4563427,-0.41269302,-0.38371754,-0.50732327,0.0006672249,3.994154e-5,1.8218518,0.8654057,1.8218518,"up","SERP1",27230,"0001501 // skeletal system development // inferred from electronic annotation /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006464 // cellular protein modification process // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006486 // protein glycosylation // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006950 // response to stress // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007009 // plasma membrane organization // traceable author statement /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0010259 // multicellular organismal aging // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from electronic annotation /// 0046622 // positive regulation of organ growth // inferred from electronic annotation /// 0048644 // muscle organ morphogenesis // inferred from electronic annotation /// 0060124 // positive regulation of growth hormone secretion // inferred from electronic annotation","0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005840 // ribosome // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:150259779-150264712 (-) // 98.88 // q25.1"]
["11724357_a_at",0.26237774,0.18462849,0.23694229,-0.18462849,-0.29557276,-0.21667767,0.0012808557,0.00032983793,1.3758048,0.4602758,1.3758048,"up","MYO5A",4644,"0006582 // melanin metabolic process // inferred from electronic annotation /// 0006810 // transport // non-traceable author statement /// 0006887 // exocytosis // inferred from electronic annotation /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0030048 // actin filament-based movement // non-traceable author statement /// 0030048 // actin filament-based movement // inferred from electronic annotation /// 0030073 // insulin secretion // inferred from electronic annotation /// 0030318 // melanocyte differentiation // inferred from electronic annotation /// 0031585 // regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity // inferred from electronic annotation /// 0031987 // locomotion involved in locomotory behavior // inferred from electronic annotation /// 0032252 // secretory granule localization // inferred from electronic annotation /// 0032400 // melanosome localization // inferred from electronic annotation /// 0032402 // melanosome transport // inferred from electronic annotation /// 0042438 // melanin biosynthetic process // inferred from electronic annotation /// 0042476 // odontogenesis // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation /// 0042640 // anagen // inferred from electronic annotation /// 0042759 // long-chain fatty acid biosynthetic process // inferred from electronic annotation /// 0043473 // pigmentation // inferred from electronic annotation /// 0048066 // developmental pigmentation // inferred from electronic annotation /// 0050808 // synapse organization // inferred from electronic annotation /// 0051643 // endoplasmic reticulum localization // inferred from electronic annotation","0001726 // ruffle // inferred from direct assay /// 0001750 // photoreceptor outer segment // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005882 // intermediate filament // inferred from electronic annotation /// 0016459 // myosin complex // inferred from electronic annotation /// 0016459 // myosin complex // non-traceable author statement /// 0030141 // secretory granule // inferred from electronic annotation /// 0030426 // growth cone // non-traceable author statement /// 0042470 // melanosome // inferred from electronic annotation /// 0042641 // actomyosin // inferred from electronic annotation /// 0043005 // neuron projection // non-traceable author statement /// 0043025 // neuronal cell body // inferred from electronic annotation","0000146 // microfilament motor activity // non-traceable author statement /// 0000146 // microfilament motor activity // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0051010 // microtubule plus-end binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from electronic annotation","chr15:52599477-52821247 (-) // 94.6 // q21.2"]
["11755792_s_at",0.22241783,0.33896494,0.1762352,-0.1762352,-0.25747204,-0.29496288,0.0022608375,0.0012176248,1.4032409,0.4887627,1.4032409,"up","PPFIA3",8541,"0007269 // neurotransmitter secretion // inferred from electronic annotation /// 0048172 // regulation of short-term neuronal synaptic plasticity // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr19:49632213-49654278 (+) // 99.18 // q13.33"]
["11721286_at",-0.33773232,-0.32571793,-0.33883667,0.32571793,0.3681326,0.41346645,0.0005096163,1.0579297e-5,-1.6281135,-0.7032013,1.6281135,"down","PREP",5550,"0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0004175 // endopeptidase activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // traceable author statement /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation /// 0070008 // serine-type exopeptidase activity // inferred from electronic annotation","chr6:105725440-105851465 (-) // 94.3 // q21"]
["11727048_s_at",-0.2433567,-0.24562931,-0.15381813,0.15381813,0.39508152,0.15720367,0.0076475614,0.006231346,-1.3656955,-0.4496358,1.3656955,"down","PPP6C",5537,"0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0006470 // protein dephosphorylation // inferred from direct assay /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006470 // protein dephosphorylation // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // inferred from direct assay /// 0004722 // protein serine/threonine phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:127908852-127952218 (-) // 96.0 // q33.3"]
["11740158_x_at",-0.44394255,-0.46921873,-0.31283522,0.54555655,0.31283522,0.37716627,0.0016202792,0.00063359755,-1.7660402,-0.8205182,1.7660402,"down","ATG10",83734,"0006497 // protein lipidation // inferred from sequence or structural similarity /// 0006497 // protein lipidation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006914 // autophagy // inferred from mutant phenotype /// 0006914 // autophagy // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0031401 // positive regulation of protein modification process // inferred from sequence or structural similarity /// 0031401 // positive regulation of protein modification process // inferred from electronic annotation /// 0032446 // protein modification by small protein conjugation // inferred from direct assay /// 0034263 // autophagy in response to ER overload // inferred from mutant phenotype","0005622 // intracellular // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0016874 // ligase activity // inferred from electronic annotation /// 0019777 // Atg12 ligase activity // inferred from sequence or structural similarity /// 0019777 // Atg12 ligase activity // inferred from electronic annotation","chr5:81267843-81551211 (+) // 77.11 // q14.1"]
["11739977_at",0.41791534,0.19282532,0.23132324,-0.2106123,-0.19282532,-0.28214645,0.0036415255,0.002417816,1.4232765,0.50921595,1.4232765,"up","GPR180",160897,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr13:95253856-95282698 (+) // 94.94 // q32.1"]
["11720511_a_at",0.24907589,0.23360062,0.1667633,-0.30061436,-0.19501972,-0.1667633,0.0017967653,0.0008006654,1.3540481,0.43727908,1.3540481,"up","CARHSP1",23589,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0035556 // intracellular signal transduction // traceable author statement /// 0043488 // regulation of mRNA stability // inferred from sequence or structural similarity /// 0043488 // regulation of mRNA stability // inferred from electronic annotation","0000177 // cytoplasmic exosome (RNase complex) // inferred from sequence or structural similarity /// 0000177 // cytoplasmic exosome (RNase complex) // inferred from electronic annotation /// 0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005622 // intracellular // traceable author statement /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation /// 0043186 // P granule // inferred from sequence or structural similarity /// 0043186 // P granule // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0019902 // phosphatase binding // non-traceable author statement","chr16:8946801-8962248 (-) // 81.56 // p13.2"]
["11720141_a_at",0.21565437,0.23006916,0.31446838,-0.3227148,-0.21565437,-0.29894447,0.0012233602,0.00028587523,1.4464353,0.5325019,1.4464353,"up","HMMR",3161,"","0005737 // cytoplasm // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005540 // hyaluronic acid binding // inferred from electronic annotation","chr5:162887516-162918947 (+) // 94.72 // q34"]
["11726889_at",0.20471764,0.15528011,0.21152782,-0.15528011,-0.28192425,-0.31198597,0.0020028213,0.00100398,1.3568288,0.44023865,1.3568288,"up","ZFP36L1",677,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006402 // mRNA catabolic process // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0043488 // regulation of mRNA stability // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003729 // mRNA binding // inferred from direct assay /// 0003729 // mRNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0017091 // AU-rich element binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:69261455-69263190 (-) // 96.85 // q24.1"]
["11728155_s_at",0.17287302,0.24011755,0.24666405,-0.17287302,-0.28037405,-0.20173693,0.0013662435,0.0003886124,1.3549249,0.43821287,1.3549249,"up","FUT4",2526,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006486 // protein glycosylation // traceable author statement /// 0036065 // fucosylation // traceable author statement /// 0036065 // fucosylation // inferred from electronic annotation /// 0042355 // L-fucose catabolic process // non-traceable author statement","0005624 // membrane fraction // traceable author statement /// 0005794 // Golgi apparatus // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0071944 // cell periphery // inferred from electronic annotation","0008417 // fucosyltransferase activity // traceable author statement /// 0008417 // fucosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0046920 // alpha-(1->3)-fucosyltransferase activity // traceable author statement /// 0046920 // alpha-(1->3)-fucosyltransferase activity // inferred from electronic annotation","chr11:94277016-94283052 (+) // 78.51 // q21"]
["11729365_at",0.16420078,0.23441982,0.18724728,-0.16420126,-0.28611088,-0.2519951,0.0014867174,0.0005054725,1.3466656,0.4293917,1.3466656,"up","PRKAA2",5563,"0006112 // energy reserve metabolic process // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // inferred from electronic annotation /// 0006853 // carnitine shuttle // traceable author statement /// 0006914 // autophagy // inferred from electronic annotation /// 0006950 // response to stress // inferred from sequence or structural similarity /// 0006950 // response to stress // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008610 // lipid biosynthetic process // inferred from sequence or structural similarity /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0010508 // positive regulation of autophagy // inferred from sequence or structural similarity /// 0010508 // positive regulation of autophagy // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0019216 // regulation of lipid metabolic process // inferred from electronic annotation /// 0031000 // response to caffeine // inferred from electronic annotation /// 0031669 // cellular response to nutrient levels // inferred from sequence or structural similarity /// 0031669 // cellular response to nutrient levels // inferred from electronic annotation /// 0032007 // negative regulation of TOR signaling cascade // inferred from sequence or structural similarity /// 0032007 // negative regulation of TOR signaling cascade // inferred from electronic annotation /// 0035404 // histone-serine phosphorylation // inferred from sequence or structural similarity /// 0035404 // histone-serine phosphorylation // inferred from electronic annotation /// 0042149 // cellular response to glucose starvation // inferred from sequence or structural similarity /// 0042149 // cellular response to glucose starvation // inferred from electronic annotation /// 0042304 // regulation of fatty acid biosynthetic process // traceable author statement /// 0042593 // glucose homeostasis // inferred from sequence or structural similarity /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0042752 // regulation of circadian rhythm // inferred from sequence or structural similarity /// 0042752 // regulation of circadian rhythm // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from sequence or structural similarity /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045821 // positive regulation of glycolysis // inferred from sequence or structural similarity /// 0046320 // regulation of fatty acid oxidation // traceable author statement /// 0048511 // rhythmic process // inferred from electronic annotation /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0055089 // fatty acid homeostasis // inferred from sequence or structural similarity /// 0071417 // cellular response to organic nitrogen // inferred from electronic annotation /// 2000505 // regulation of energy homeostasis // inferred from sequence or structural similarity","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0031588 // AMP-activated protein kinase complex // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from sequence or structural similarity /// 0003682 // chromatin binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from sequence or structural similarity /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004679 // AMP-activated protein kinase activity // inferred from direct assay /// 0004679 // AMP-activated protein kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0030674 // protein binding, bridging // inferred from electronic annotation /// 0035174 // histone serine kinase activity // inferred from sequence or structural similarity /// 0035174 // histone serine kinase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:57110845-57181008 (+) // 89.25 // p32.2"]
["11733383_a_at",0.19678354,0.19668579,0.19228983,-0.36019325,-0.19228935,-0.43304634,0.002973073,0.0018285307,1.4377,0.5237627,1.4377,"up","AFAP1",60312,"0009966 // regulation of signal transduction // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005884 // actin filament // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay","0003779 // actin binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0042169 // SH2 domain binding // inferred from electronic annotation","chr4:7760439-7941653 (-) // 98.02 // p16.1"]
["11743634_s_at",0.30669117,0.40073156,0.3982277,-0.48787642,-0.30669117,-0.50577354,0.0013056329,0.00034460775,1.7435131,0.8019972,1.7435131,"up","MLLT4",4301,"0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005911 // cell-cell junction // traceable author statement /// 0005912 // adherens junction // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation","0008022 // protein C-terminus binding // traceable author statement","chr6:168227601-168372703 (+) // 95.49 // q27"]
["11739799_a_at",-0.40972948,-0.28348255,-0.3438897,0.34249544,0.39642286,0.28348303,0.0009813054,0.00014955376,-1.6093756,-0.686501,1.6093756,"down","LY6K",54742,"","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation","","chr8:143781528-143786054 (+) // 59.9 // q24.3"]
["11739602_a_at",0.2569008,0.320817,0.32210636,-0.3326311,-0.34746552,-0.2569008,0.00073524297,6.5228276e-5,1.5286667,0.6122739,1.5286667,"up","BIRC5",332,"0000086 // G2/M transition of mitotic cell cycle // inferred from direct assay /// 0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0000910 // cytokinesis // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitosis // traceable author statement /// 0007067 // mitosis // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // non-traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0031503 // protein complex localization // inferred from mutant phenotype /// 0031536 // positive regulation of exit from mitosis // inferred from mutant phenotype /// 0031577 // spindle checkpoint // inferred from mutant phenotype /// 0042981 // regulation of apoptotic process // inferred from mutant phenotype /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045931 // positive regulation of mitotic cell cycle // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation /// 0051301 // cell division // inferred from mutant phenotype /// 0051303 // establishment of chromosome localization // inferred from mutant phenotype","0000228 // nuclear chromosome // inferred from direct assay /// 0000775 // chromosome, centromeric region // inferred from direct assay /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from direct assay /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005814 // centriole // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005876 // spindle microtubule // inferred from direct assay /// 0005881 // cytoplasmic microtubule // inferred from direct assay /// 0016021 // integral to membrane // non-traceable author statement /// 0030496 // midbody // inferred from direct assay /// 0030496 // midbody // inferred from electronic annotation /// 0031021 // interphase microtubule organizing center // inferred from direct assay /// 0032133 // chromosome passenger complex // inferred from physical interaction","0004869 // cysteine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from direct assay /// 0008017 // microtubule binding // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // non-traceable author statement /// 0008536 // Ran GTPase binding // inferred from physical interaction /// 0015631 // tubulin binding // inferred from direct assay /// 0019899 // enzyme binding // inferred from physical interaction /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0043027 // cysteine-type endopeptidase inhibitor activity involved in apoptotic process // inferred from mutant phenotype /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0048037 // cofactor binding // inferred from direct assay /// 0050897 // cobalt ion binding // non-traceable author statement /// 0051087 // chaperone binding // inferred from physical interaction","chr17:76210266-76221716 (+) // 93.43 // q25.3"]
["11756199_a_at",-0.18838882,-0.24715853,-0.31075,0.6049156,0.56473637,0.18838882,0.008374895,0.006935798,-1.6261339,-0.70144606,1.6261339,"down","ATMIN",23300,"0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0045502 // dynein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:81070791-81080955 (+) // 89.2 // q23.2"]
["11715479_a_at",0.30915546,0.34272385,0.25712395,-0.25712395,-0.282794,-0.28529072,0.00061091204,2.6046639e-5,1.4928515,0.57807064,1.4928515,"up","GABARAP",11337,"0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0006605 // protein targeting // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0000421 // autophagic vacuole membrane // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005776 // autophagic vacuole // inferred from direct assay /// 0005776 // autophagic vacuole // inferred from electronic annotation /// 0005790 // smooth endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005875 // microtubule associated complex // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0012505 // endomembrane system // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from electronic annotation /// 0048487 // beta-tubulin binding // inferred from direct assay /// 0050811 // GABA receptor binding // inferred from physical interaction /// 0050811 // GABA receptor binding // inferred from electronic annotation","chr17:7143388-7146437 (-) // 97.64 // p13.1"]
["11741168_a_at",-0.14917946,-0.2043333,-0.16020823,0.25533056,0.23708534,0.14917946,0.001459056,0.0004735899,-1.3059552,-0.38510543,1.3059552,"down","MSRB3",253827,"0030091 // protein repair // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation","0000318 // protein-methionine-R-oxide reductase activity // inferred from direct assay /// 0008113 // peptide-methionine-(S)-S-oxide reductase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:65672422-65860680 (+) // 85.91 // q14.3"]
["11720221_at",0.25596237,0.21755219,0.17949486,-0.17949486,-0.19918442,-0.19583702,0.0007085977,5.762598e-5,1.3279264,0.40917522,1.3279264,"up","GFPT1",2673,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006002 // fructose 6-phosphate metabolic process // traceable author statement /// 0006048 // UDP-N-acetylglucosamine biosynthetic process // inferred from electronic annotation /// 0006048 // UDP-N-acetylglucosamine biosynthetic process // traceable author statement /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0006541 // glutamine metabolic process // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016051 // carbohydrate biosynthetic process // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004360 // glutamine-fructose-6-phosphate transaminase (isomerizing) activity // inferred from electronic annotation /// 0004360 // glutamine-fructose-6-phosphate transaminase (isomerizing) activity // traceable author statement /// 0008483 // transaminase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr2:69546911-69614382 (-) // 88.36 // p13.3"]
["11734939_a_at",-0.22117424,-0.31070757,-0.21790504,0.21790552,0.41500282,0.32101965,0.0019288461,0.0009195662,-1.4823693,-0.56790495,1.4823693,"down","SLC16A9",220963,"0006810 // transport // inferred from electronic annotation /// 0046415 // urate metabolic process // inferred from mutant phenotype /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0015293 // symporter activity // inferred from electronic annotation","chr10:61410522-61469837 (-) // 91.24 // q21.2"]
["11741135_s_at",0.2585845,0.27587986,0.19338655,-0.4055195,-0.19338655,-0.30337667,0.0022428269,0.0012006175,1.4573808,0.5433779,1.4573808,"up","CHN1",1123,"0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from sequence or structural similarity /// 0008045 // motor axon guidance // inferred from electronic annotation /// 0032314 // regulation of Rac GTPase activity // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0048013 // ephrin receptor signaling pathway // inferred from sequence or structural similarity /// 0048013 // ephrin receptor signaling pathway // inferred from electronic annotation /// 0050770 // regulation of axonogenesis // inferred from sequence or structural similarity /// 0050770 // regulation of axonogenesis // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046875 // ephrin receptor binding // inferred from electronic annotation","chr2:175664041-175870170 (-) // 98.05 // q31.1"]
["11730900_s_at",0.3164873,0.27672577,0.24476719,-0.24476719,-0.32274485,-0.44318533,0.001550606,0.00055170426,1.5328599,0.6162259,1.5328599,"up","MBOAT2",129642,"0006644 // phospholipid metabolic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003841 // 1-acylglycerol-3-phosphate O-acyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation","chr2:8995031-9143942 (-) // 89.12 // p25.1"]
["11754121_a_at",0.29816008,0.32848024,0.25118017,-0.41305447,-0.25118017,-0.4476037,0.0014867174,0.00050706835,1.5836127,0.6632196,1.5836127,"up","BIK",638,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0032464 // positive regulation of protein homooligomerization // inferred from direct assay /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from direct assay","0005740 // mitochondrial envelope // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0051400 // BH domain binding // inferred from electronic annotation","chr22:43520028-43525309 (+) // 67.86 // q13.2"]
["11724916_at",0.6199541,0.5316572,0.5185709,-0.5727329,-0.5185709,-0.5404515,0.00040977335,6.457724e-6,2.1445067,1.1006458,2.1445067,"up","TMTC3",160418,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:88536072-88593664 (+) // 91.71 // q21.32"]
["11730792_at",-0.22065258,-0.23225069,-0.19727707,0.19727755,0.23352432,0.2012415,0.0004969139,1.0058119e-5,-1.3448151,-0.42740792,1.3448151,"down","SVIP",258010,"","0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030868 // smooth endoplasmic reticulum membrane // inferred from electronic annotation","","chr11:22840474-22851398 (-) // 83.03 // p14.3"]
["11737296_s_at",-0.5263934,-0.83616734,-0.7576699,0.5263934,0.8021951,0.61977243,0.0013662435,0.0003883488,-2.5600946,-1.3561971,2.5600946,"down","TMTC4",84899,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr13:101256090-101327103 (-) // 98.89 // q32.3"]
["11743875_at",0.18762875,0.19516087,0.18947983,-0.18762875,-0.1914835,-0.21046734,0.00024662862,8.0365726e-7,1.307928,0.38728303,1.307928,"up","CEP72",55722,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007051 // spindle organization // inferred from mutant phenotype /// 0033566 // gamma-tubulin complex localization // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from electronic annotation","chr5:612386-653673 (+) // 96.71 // p15.33"]
["11749787_a_at",0.614028,0.38038063,0.3982296,-0.38038063,-0.57147884,-0.519907,0.0015251196,0.0005359594,1.938313,0.95480156,1.938313,"up","SEPT2",4735,"0002036 // regulation of L-glutamate transport // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007224 // smoothened signaling pathway // inferred from sequence or structural similarity /// 0007224 // smoothened signaling pathway // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0032880 // regulation of protein localization // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from sequence or structural similarity /// 0042384 // cilium assembly // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0000145 // exocyst // inferred from electronic annotation /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005938 // cell cortex // inferred from sequence or structural similarity /// 0005938 // cell cortex // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030496 // midbody // inferred from electronic annotation /// 0031105 // septin complex // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0060170 // cilium membrane // inferred from sequence or structural similarity /// 0060170 // cilium membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0030234 // enzyme regulator activity // inferred from electronic annotation /// 0032947 // protein complex scaffold // inferred from electronic annotation","chr2:242255367-242291809 (+) // 99.37 // q37.3"]
["11748846_a_at",0.3771696,0.3057127,0.2099514,-0.2099514,-0.23127556,-0.284513,0.0015246323,0.0005351315,1.4534935,0.53952456,1.4534935,"up","NIT1",4817,"0006807 // nitrogen compound metabolic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","0000257 // nitrilase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016810 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds // inferred from electronic annotation","chr1:161087906-161090600 (+) // 99.78 // q23.3"]
["11722666_a_at",0.5714364,0.7514086,0.66525364,-0.5714364,-0.94446445,-0.874825,0.0012591777,0.00031486017,2.7503364,1.4596081,2.7503364,"up","GABRB3",2562,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0034220 // ion transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0034707 // chloride channel complex // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004890 // GABA-A receptor activity // inferred from electronic annotation /// 0004890 // GABA-A receptor activity // traceable author statement /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from electronic annotation","chr15:26788698-27018251 (-) // 96.39 // q12"]
["11758907_at",0.30891848,0.22309923,0.39581585,-0.2559409,-0.3235793,-0.22309923,0.0015673926,0.00057309057,1.4915556,0.5768177,1.4915556,"up","ZNF827",152485,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:146678779-146860112 (-) // 96.32 // q31.21"]
["11728847_a_at",0.4379444,0.4676261,0.32762814,-0.5749626,-0.3276286,-0.4571848,0.00147073,0.00048390945,1.8204875,0.86432487,1.8204875,"up","FAM179A",165186,"","","","chr2:29204163-29275096 (+) // 98.77 // p23.2"]
["11727731_at",0.3112793,0.22529125,0.1834507,-0.20401525,-0.1834507,-0.23576641,0.0013628498,0.00038385176,1.3639126,0.44775122,1.3639126,"up","RASGEF1A",221002,"0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0016477 // cell migration // inferred from direct assay /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005088 // Ras guanyl-nucleotide exchange factor activity // inferred from direct assay","chr10:43689983-43701575 (-) // 96.38 // q11.21"]
["11749094_a_at",-0.25128174,-0.27034044,-0.18364811,0.35629416,0.2432208,0.18364763,0.0019608224,0.00096280355,-1.410439,-0.4961443,1.410439,"down","DSE",29940,"0006334 // nucleosome assembly // inferred from electronic annotation /// 0015012 // heparan sulfate proteoglycan biosynthetic process // inferred from electronic annotation /// 0030206 // chondroitin sulfate biosynthetic process // inferred from electronic annotation /// 0030208 // dermatan sulfate biosynthetic process // inferred from direct assay","0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016853 // isomerase activity // inferred from electronic annotation /// 0047757 // chondroitin-glucuronate 5-epimerase activity // inferred from direct assay /// 0047757 // chondroitin-glucuronate 5-epimerase activity // inferred from electronic annotation","chr6:116601248-116758984 (+) // 96.82 // q22.1"]
["11749777_s_at",0.30136108,0.18401432,0.1418848,-0.1418848,-0.20270061,-0.1758194,0.002796706,0.0016717606,1.3036486,0.382555,1.3036486,"up","TRIM16L","10626 /// 147166","0032526 // response to retinoic acid // inferred from expression pattern /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0043967 // histone H4 acetylation // inferred from direct assay /// 0045618 // positive regulation of keratinocyte differentiation // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0046683 // response to organophosphorus // inferred from expression pattern /// 0048386 // positive regulation of retinoic acid receptor signaling pathway // inferred from direct assay /// 0050718 // positive regulation of interleukin-1 beta secretion // inferred from mutant phenotype /// 0060416 // response to growth hormone stimulus // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016605 // PML body // inferred from direct assay","0003677 // DNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019966 // interleukin-1 binding // inferred from physical interaction /// 0032089 // NACHT domain binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:18601310-18638980 (+) // 98.56 // p11.2 /// chr17:15531721-15587619 (-) // 96.24 // p12"]
["11717438_x_at",-0.4284048,-0.39464474,-0.3473978,0.61787796,0.3473978,0.34969997,0.0018736367,0.0008705105,-1.7758065,-0.8284744,1.7758065,"down","TOP1",7150,"0006260 // DNA replication // not recorded /// 0006260 // DNA replication // inferred from electronic annotation /// 0006265 // DNA topological change // not recorded /// 0006265 // DNA topological change // inferred from electronic annotation /// 0006338 // chromatin remodeling // not recorded /// 0007059 // chromosome segregation // not recorded /// 0012501 // programmed cell death // non-traceable author statement /// 0016310 // phosphorylation // non-traceable author statement /// 0040016 // embryonic cleavage // inferred from electronic annotation /// 0042493 // response to drug // inferred from expression pattern /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0000228 // nuclear chromosome // inferred from direct assay /// 0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0031298 // replication fork protection complex // not recorded /// 0043204 // perikaryon // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0003916 // DNA topoisomerase activity // inferred from electronic annotation /// 0003917 // DNA topoisomerase type I activity // inferred from mutant phenotype /// 0003917 // DNA topoisomerase type I activity // inferred from electronic annotation /// 0003918 // DNA topoisomerase (ATP-hydrolyzing) activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation","chr20:39657459-39753124 (+) // 93.96 // q12"]
["11716437_a_at",-0.18643093,-0.15564632,-0.21017742,0.6517582,0.20972347,0.15564632,0.030751005,0.029585592,-1.4370673,-0.52312756,1.4370673,"down","RAD21",5885,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006302 // double-strand break repair // traceable author statement /// 0006310 // DNA recombination // traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007091 // mitotic metaphase/anaphase transition // traceable author statement /// 0007131 // reciprocal meiotic recombination // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0071168 // protein localization to chromatin // inferred from mutant phenotype","0000228 // nuclear chromosome // inferred from electronic annotation /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0008278 // cohesin complex // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr8:117858172-117887109 (-) // 96.69 // q24.11"]
["11719010_at",0.23475838,0.35776997,0.37070942,-0.23475838,-0.2975731,-0.32109165,0.0012176305,0.0002752192,1.5215626,0.6055536,1.5215626,"up","TMEM99",147184,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr17:38975373-38992526 (+) // 75.39 // q21.2"]
["11760849_a_at",0.15133142,0.13690138,0.13548326,-0.13548374,-0.28592348,-0.47314167,0.012302879,0.010879122,1.3560606,0.43942165,1.3560606,"up","INADL",10207,"0034329 // cell junction assembly // traceable author statement /// 0035556 // intracellular signal transduction // non-traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement /// 0070830 // tight junction assembly // traceable author statement","0005622 // intracellular // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from direct assay /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:62417983-62583067 (+) // 93.4 // p31.3"]
["11720023_a_at",0.25045395,0.2154913,0.3232026,-0.27569294,-0.21549177,-0.2705307,0.000995791,0.00015409978,1.4309313,0.5169544,1.4309313,"up","FAM118A",55007,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr22:45704862-45737836 (+) // 81.84 // q13.31"]
["11757815_s_at",0.17629051,0.16549778,0.12247658,-0.39254522,-0.12247658,-0.36155462,0.008210878,0.0067752115,1.3631526,0.4469471,1.3631526,"up","METTL7A",25840,"0008152 // metabolic process // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005811 // lipid particle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr12:51325836-51326287 (+) // 98.04 // q13.12"]
["11736582_a_at",0.17938519,0.23400545,0.28612375,-0.4882946,-0.17938471,-0.49755287,0.0060143746,0.0046731024,1.5385616,0.62158215,1.5385616,"up","TRIM36",55521,"0007340 // acrosome reaction // inferred from electronic annotation","0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:114460477-114516243 (-) // 98.99 // q22.3"]
["11736169_a_at",-0.2664423,-0.33872318,-0.5657902,0.36846542,0.2664423,0.29587746,0.0029613294,0.001812252,-1.6251583,-0.70058024,1.6251583,"down","NDEL1",81565,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0001764 // neuron migration // inferred from electronic annotation /// 0001833 // inner cell mass cell proliferation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from mutant phenotype /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0008090 // retrograde axon cargo transport // inferred from electronic annotation /// 0010975 // regulation of neuron projection development // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0021799 // cerebral cortex radially oriented cell migration // inferred from electronic annotation /// 0021955 // central nervous system neuron axonogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0032864 // activation of Cdc42 GTPase activity // inferred from electronic annotation /// 0045773 // positive regulation of axon extension // inferred from electronic annotation /// 0048680 // positive regulation of axon regeneration // inferred from electronic annotation /// 0051081 // nuclear envelope disassembly // inferred from electronic annotation /// 0051642 // centrosome localization // inferred from electronic annotation /// 0060052 // neurofilament cytoskeleton organization // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005871 // kinesin complex // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005875 // microtubule associated complex // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation /// 0060053 // neurofilament cytoskeleton // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from electronic annotation /// 0043014 // alpha-tubulin binding // inferred from electronic annotation /// 0048487 // beta-tubulin binding // inferred from electronic annotation /// 0070012 // oligopeptidase activity // inferred from electronic annotation","chr17:8339176-8371481 (+) // 95.42 // p13.1"]
["11749728_a_at",0.19317627,0.15552616,0.14577293,-0.14577293,-0.1673441,-0.35395145,0.005961585,0.004613681,1.3078357,0.38718128,1.3078357,"up","KIAA1715",80856,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007596 // blood coagulation // inferred from electronic annotation /// 0035115 // embryonic forelimb morphogenesis // inferred from electronic annotation /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0060173 // limb development // non-traceable author statement","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:176793902-176867002 (-) // 96.48 // q31.1"]
["11744594_a_at",0.37153244,0.3626938,0.2602992,-0.27423286,-0.26484108,-0.2602992,0.00077926775,7.637247e-5,1.5135813,0.5979662,1.5135813,"up","SEPT6",23157,"0000910 // cytokinesis // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0030496 // midbody // inferred from electronic annotation /// 0031105 // septin complex // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0043679 // axon terminus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation","chrX:118749686-118827333 (-) // 98.72 // q24"]
["11717512_a_at",0.32762337,0.22387123,0.21019316,-0.27135706,-0.21019316,-0.23883295,0.0012172924,0.0002738324,1.4083673,0.49402362,1.4083673,"up","SEPT8",23176,"0007049 // cell cycle // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0031105 // septin complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation","chr5:132091556-132113084 (-) // 89.78 // q31.1"]
["11749934_s_at",0.27587032,0.22942066,0.26719666,-0.22942162,-0.38309193,-0.25196362,0.0013760548,0.00039994688,1.4596828,0.5456549,1.4596828,"up","HSP90AA4P",3323,"0006457 // protein folding // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr4:190394300-190396344 (+) // 95.31 // q35.2"]
["11740409_a_at",0.41416073,0.31732368,0.46120167,-0.45469904,-0.31732368,-0.38462353,0.0010386986,0.00017440978,1.7208374,0.78311074,1.7208374,"up","FGFR2",2263,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0001525 // angiogenesis // inferred from sequence or structural similarity /// 0001657 // ureteric bud development // inferred from sequence or structural similarity /// 0001701 // in utero embryonic development // inferred from sequence or structural similarity /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from sequence or structural similarity /// 0003148 // outflow tract septum morphogenesis // inferred from sequence or structural similarity /// 0003149 // membranous septum morphogenesis // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007267 // cell-cell signaling // inferred from sequence or structural similarity /// 0007409 // axonogenesis // inferred from sequence or structural similarity /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from genetic interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from physical interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // non-traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0008589 // regulation of smoothened signaling pathway // inferred from sequence or structural similarity /// 0009791 // post-embryonic development // inferred from sequence or structural similarity /// 0009880 // embryonic pattern specification // inferred from sequence or structural similarity /// 0009887 // organ morphogenesis // inferred from sequence or structural similarity /// 0010453 // regulation of cell fate commitment // inferred from sequence or structural similarity /// 0010518 // positive regulation of phospholipase activity // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016331 // morphogenesis of embryonic epithelium // inferred from sequence or structural similarity /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0021769 // orbitofrontal cortex development // inferred from sequence or structural similarity /// 0021847 // ventricular zone neuroblast division // inferred from sequence or structural similarity /// 0021860 // pyramidal neuron development // inferred from sequence or structural similarity /// 0022612 // gland morphogenesis // inferred from sequence or structural similarity /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from sequence or structural similarity /// 0030282 // bone mineralization // inferred from sequence or structural similarity /// 0030324 // lung development // inferred from sequence or structural similarity /// 0030855 // epithelial cell differentiation // inferred from sequence or structural similarity /// 0030901 // midbrain development // inferred from sequence or structural similarity /// 0030916 // otic vesicle formation // inferred from sequence or structural similarity /// 0031069 // hair follicle morphogenesis // inferred from sequence or structural similarity /// 0032808 // lacrimal gland development // inferred from sequence or structural similarity /// 0033688 // regulation of osteoblast proliferation // traceable author statement /// 0035264 // multicellular organism growth // inferred from sequence or structural similarity /// 0035265 // organ growth // inferred from sequence or structural similarity /// 0035602 // fibroblast growth factor receptor signaling pathway involved in negative regulation of apoptotic process in bone marrow // inferred from sequence or structural similarity /// 0035603 // fibroblast growth factor receptor signaling pathway involved in hemopoiesis // inferred from sequence or structural similarity /// 0035604 // fibroblast growth factor receptor signaling pathway involved in positive regulation of cell proliferation in bone marrow // inferred from sequence or structural similarity /// 0035607 // fibroblast growth factor receptor signaling pathway involved in orbitofrontal cortex development // inferred from sequence or structural similarity /// 0040014 // regulation of multicellular organism growth // inferred from sequence or structural similarity /// 0040036 // regulation of fibroblast growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0042472 // inner ear morphogenesis // inferred from sequence or structural similarity /// 0042476 // odontogenesis // inferred from sequence or structural similarity /// 0043410 // positive regulation of MAPK cascade // inferred from mutant phenotype /// 0045165 // cell fate commitment // inferred from sequence or structural similarity /// 0045667 // regulation of osteoblast differentiation // traceable author statement /// 0045787 // positive regulation of cell cycle // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048286 // lung alveolus development // inferred from sequence or structural similarity /// 0048557 // embryonic digestive tract morphogenesis // inferred from sequence or structural similarity /// 0048562 // embryonic organ morphogenesis // inferred from sequence or structural similarity /// 0048565 // digestive tract development // inferred from sequence or structural similarity /// 0048568 // embryonic organ development // inferred from sequence or structural similarity /// 0048608 // reproductive structure development // inferred from sequence or structural similarity /// 0048705 // skeletal system morphogenesis // traceable author statement /// 0048730 // epidermis morphogenesis // inferred from sequence or structural similarity /// 0048755 // branching morphogenesis of a nerve // inferred from sequence or structural similarity /// 0048762 // mesenchymal cell differentiation // inferred from sequence or structural similarity /// 0050679 // positive regulation of epithelial cell proliferation // inferred from sequence or structural similarity /// 0051150 // regulation of smooth muscle cell differentiation // inferred from sequence or structural similarity /// 0051781 // positive regulation of cell division // inferred from sequence or structural similarity /// 0055010 // ventricular cardiac muscle tissue morphogenesis // inferred from sequence or structural similarity /// 0060045 // positive regulation of cardiac muscle cell proliferation // inferred from sequence or structural similarity /// 0060174 // limb bud formation // inferred from sequence or structural similarity /// 0060348 // bone development // inferred from sequence or structural similarity /// 0060349 // bone morphogenesis // inferred from sequence or structural similarity /// 0060442 // branching involved in prostate gland morphogenesis // inferred from sequence or structural similarity /// 0060445 // branching involved in salivary gland morphogenesis // inferred from sequence or structural similarity /// 0060449 // bud elongation involved in lung branching // inferred from sequence or structural similarity /// 0060463 // lung lobe morphogenesis // inferred from sequence or structural similarity /// 0060484 // lung-associated mesenchyme development // inferred from sequence or structural similarity /// 0060501 // positive regulation of epithelial cell proliferation involved in lung morphogenesis // inferred from sequence or structural similarity /// 0060512 // prostate gland morphogenesis // inferred from sequence or structural similarity /// 0060523 // prostate epithelial cord elongation // inferred from sequence or structural similarity /// 0060527 // prostate epithelial cord arborization involved in prostate glandular acinus morphogenesis // inferred from sequence or structural similarity /// 0060529 // squamous basal epithelial stem cell differentiation involved in prostate gland acinus development // inferred from sequence or structural similarity /// 0060595 // fibroblast growth factor receptor signaling pathway involved in mammary gland specification // inferred from sequence or structural similarity /// 0060601 // lateral sprouting from an epithelium // inferred from sequence or structural similarity /// 0060615 // mammary gland bud formation // inferred from sequence or structural similarity /// 0060664 // epithelial cell proliferation involved in salivary gland morphogenesis // inferred from sequence or structural similarity /// 0060667 // branch elongation involved in salivary gland morphogenesis // inferred from sequence or structural similarity /// 0060670 // branching involved in labyrinthine layer morphogenesis // inferred from sequence or structural similarity /// 0060687 // regulation of branching involved in prostate gland morphogenesis // inferred from sequence or structural similarity /// 0060688 // regulation of morphogenesis of a branching structure // inferred from sequence or structural similarity /// 0060915 // mesenchymal cell differentiation involved in lung development // inferred from sequence or structural similarity /// 0060916 // mesenchymal cell proliferation involved in lung development // inferred from sequence or structural similarity /// 0070372 // regulation of ERK1 and ERK2 cascade // inferred from sequence or structural similarity /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from sequence or structural similarity /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from sequence or structural similarity","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0005938 // cell cortex // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0060076 // excitatory synapse // inferred from sequence or structural similarity","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // non-traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from direct assay /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from physical interaction /// 0005007 // fibroblast growth factor-activated receptor activity // non-traceable author statement /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017134 // fibroblast growth factor binding // inferred from direct assay /// 0017134 // fibroblast growth factor binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction","chr10:123237844-123356159 (-) // 98.44 // q26.13"]
["11716548_x_at",0.5208421,0.31081724,0.20474386,-0.2072115,-0.20474434,-0.24185753,0.005185627,0.0038445531,1.4777534,0.5634055,1.4777534,"up","FGFR1",2260,"0000165 // MAPK cascade // traceable author statement /// 0001501 // skeletal system development // traceable author statement /// 0001764 // neuron migration // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from genetic interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from physical interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0010518 // positive regulation of phospholipase activity // traceable author statement /// 0010863 // positive regulation of phospholipase C activity // inferred from direct assay /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // traceable author statement /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0043009 // chordate embryonic development // traceable author statement /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0043410 // positive regulation of MAPK cascade // inferred from mutant phenotype /// 0045595 // regulation of cell differentiation // traceable author statement /// 0045666 // positive regulation of neuron differentiation // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048705 // skeletal system morphogenesis // traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from direct assay /// 0005007 // fibroblast growth factor-activated receptor activity // traceable author statement /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from direct assay /// 0008201 // heparin binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017134 // fibroblast growth factor binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction","chr8:38267736-38326352 (-) // 88.37 // p11.23"]
["11715584_a_at",0.28509235,0.26183224,0.3152523,-0.43153477,-0.26183224,-0.3133936,0.0012233602,0.0002900217,1.540052,0.62297916,1.540052,"up","CAV1",857,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000165 // MAPK cascade // inferred from electronic annotation /// 0000188 // inactivation of MAPK activity // inferred from sequence or structural similarity /// 0000188 // inactivation of MAPK activity // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from sequence or structural similarity /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from sequence or structural similarity /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001937 // negative regulation of endothelial cell proliferation // inferred from sequence or structural similarity /// 0001937 // negative regulation of endothelial cell proliferation // inferred from electronic annotation /// 0001960 // negative regulation of cytokine-mediated signaling pathway // inferred from electronic annotation /// 0006641 // triglyceride metabolic process // inferred from sequence or structural similarity /// 0006641 // triglyceride metabolic process // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from sequence or structural similarity /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from sequence or structural similarity /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0006940 // regulation of smooth muscle contraction // inferred from sequence or structural similarity /// 0006940 // regulation of smooth muscle contraction // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from sequence or structural similarity /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008104 // protein localization // inferred from sequence or structural similarity /// 0008104 // protein localization // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // inferred from mutant phenotype /// 0009267 // cellular response to starvation // inferred from expression pattern /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009967 // positive regulation of signal transduction // inferred from electronic annotation /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation /// 0010332 // response to gamma radiation // inferred from electronic annotation /// 0010524 // positive regulation of calcium ion transport into cytosol // inferred from sequence or structural similarity /// 0010524 // positive regulation of calcium ion transport into cytosol // inferred from electronic annotation /// 0010952 // positive regulation of peptidase activity // inferred from sequence or structural similarity /// 0010952 // positive regulation of peptidase activity // inferred from electronic annotation /// 0016050 // vesicle organization // inferred from direct assay /// 0019217 // regulation of fatty acid metabolic process // inferred from sequence or structural similarity /// 0019217 // regulation of fatty acid metabolic process // inferred from electronic annotation /// 0019915 // lipid storage // inferred from sequence or structural similarity /// 0019915 // lipid storage // inferred from electronic annotation /// 0030193 // regulation of blood coagulation // inferred from mutant phenotype /// 0030301 // cholesterol transport // traceable author statement /// 0030514 // negative regulation of BMP signaling pathway // inferred from direct assay /// 0030857 // negative regulation of epithelial cell differentiation // inferred from sequence or structural similarity /// 0030857 // negative regulation of epithelial cell differentiation // inferred from electronic annotation /// 0030879 // mammary gland development // inferred from sequence or structural similarity /// 0030879 // mammary gland development // inferred from electronic annotation /// 0031116 // positive regulation of microtubule polymerization // inferred from electronic annotation /// 0031295 // T cell costimulation // inferred from direct assay /// 0032091 // negative regulation of protein binding // inferred from direct assay /// 0032507 // maintenance of protein location in cell // inferred from sequence or structural similarity /// 0032507 // maintenance of protein location in cell // inferred from electronic annotation /// 0032570 // response to progesterone stimulus // inferred from direct assay /// 0033137 // negative regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0033344 // cholesterol efflux // inferred from electronic annotation /// 0033484 // nitric oxide homeostasis // inferred from sequence or structural similarity /// 0033484 // nitric oxide homeostasis // inferred from electronic annotation /// 0042310 // vasoconstriction // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042524 // negative regulation of tyrosine phosphorylation of Stat5 protein // inferred from electronic annotation /// 0042632 // cholesterol homeostasis // inferred from sequence or structural similarity /// 0042632 // cholesterol homeostasis // traceable author statement /// 0042632 // cholesterol homeostasis // inferred from electronic annotation /// 0043407 // negative regulation of MAP kinase activity // inferred from electronic annotation /// 0043409 // negative regulation of MAPK cascade // inferred from sequence or structural similarity /// 0043409 // negative regulation of MAPK cascade // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from direct assay /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045019 // negative regulation of nitric oxide biosynthetic process // inferred from sequence or structural similarity /// 0045019 // negative regulation of nitric oxide biosynthetic process // inferred from electronic annotation /// 0045768 // positive regulation of anti-apoptosis // inferred from electronic annotation /// 0045807 // positive regulation of endocytosis // inferred from electronic annotation /// 0045907 // positive regulation of vasoconstriction // inferred from sequence or structural similarity /// 0045907 // positive regulation of vasoconstriction // inferred from electronic annotation /// 0046209 // nitric oxide metabolic process // traceable author statement /// 0046426 // negative regulation of JAK-STAT cascade // inferred from sequence or structural similarity /// 0046426 // negative regulation of JAK-STAT cascade // inferred from electronic annotation /// 0046785 // microtubule polymerization // inferred from electronic annotation /// 0048554 // positive regulation of metalloenzyme activity // inferred from sequence or structural similarity /// 0048554 // positive regulation of metalloenzyme activity // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement /// 0050999 // regulation of nitric-oxide synthase activity // traceable author statement /// 0051259 // protein oligomerization // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from sequence or structural similarity /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051480 // cytosolic calcium ion homeostasis // inferred from direct assay /// 0051592 // response to calcium ion // inferred from sequence or structural similarity /// 0051592 // response to calcium ion // inferred from electronic annotation /// 0051899 // membrane depolarization // inferred from sequence or structural similarity /// 0051899 // membrane depolarization // inferred from electronic annotation /// 0052547 // regulation of peptidase activity // inferred from sequence or structural similarity /// 0052547 // regulation of peptidase activity // inferred from electronic annotation /// 0055074 // calcium ion homeostasis // inferred from sequence or structural similarity /// 0055074 // calcium ion homeostasis // inferred from electronic annotation /// 0060056 // mammary gland involution // inferred from sequence or structural similarity /// 0060056 // mammary gland involution // inferred from electronic annotation /// 0070836 // caveola assembly // inferred from mutant phenotype /// 0071455 // cellular response to hyperoxia // inferred from mutant phenotype /// 0072584 // caveolin-mediated endocytosis // inferred from direct assay /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from sequence or structural similarity /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from mutant phenotype /// 2000286 // receptor internalization involved in canonical Wnt receptor signaling pathway // inferred from mutant phenotype /// 2001238 // positive regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype","0000139 // Golgi membrane // inferred from direct assay /// 0000139 // Golgi membrane // traceable author statement /// 0000139 // Golgi membrane // inferred from electronic annotation /// 0000299 // integral to membrane of membrane fraction // inferred from electronic annotation /// 0002080 // acrosomal membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from direct assay /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005811 // lipid particle // traceable author statement /// 0005811 // lipid particle // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0005901 // caveola // inferred from direct assay /// 0005901 // caveola // non-traceable author statement /// 0005901 // caveola // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0009925 // basal plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from direct assay /// 0019861 // flagellum // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0031410 // cytoplasmic vesicle // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay /// 0045121 // membrane raft // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000149 // SNARE binding // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005113 // patched binding // inferred from physical interaction /// 0005198 // structural molecule activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0015485 // cholesterol binding // traceable author statement /// 0016504 // peptidase activator activity // inferred from sequence or structural similarity /// 0016504 // peptidase activator activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019900 // kinase binding // inferred from electronic annotation /// 0019905 // syntaxin binding // inferred from electronic annotation /// 0032947 // protein complex scaffold // traceable author statement /// 0050998 // nitric-oxide synthase binding // inferred from physical interaction","chr7:116164838-116201230 (+) // 89.57 // q31.2"]
["11737753_s_at",-0.27812672,-0.30104828,-0.20410538,0.29811764,0.20410538,0.22192669,0.0011846017,0.00025629753,-1.4166435,-0.5024767,1.4166435,"down","SNX5",27131,"0006810 // transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0006907 // pinocytosis // inferred from direct assay /// 0007154 // cell communication // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0001726 // ruffle // inferred from electronic annotation /// 0001891 // phagocytic cup // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031234 // extrinsic to internal side of plasma membrane // inferred from direct assay /// 0031313 // extrinsic to endosome membrane // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from direct assay /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0070685 // macropinocytic cup // inferred from direct assay","0008289 // lipid binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from direct assay /// 0035091 // phosphatidylinositol binding // inferred from sequence or structural similarity /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr20:17922245-17949496 (-) // 97.56 // p11.23"]
["11741435_s_at",-0.16304684,-0.24200916,-0.24102402,0.38688755,0.16304684,0.24204445,0.0036755858,0.0024531144,-1.3941183,-0.47935295,1.3941183,"down","GRB2",2885,"0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from physical interaction /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030838 // positive regulation of actin filament polymerization // inferred from electronic annotation /// 0031295 // T cell costimulation // traceable author statement /// 0031623 // receptor internalization // inferred from mutant phenotype /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0042770 // signal transduction in response to DNA damage // inferred from mutant phenotype /// 0043408 // regulation of MAPK cascade // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048646 // anatomical structure formation involved in morphogenesis // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0060670 // branching involved in labyrinthine layer morphogenesis // inferred from electronic annotation /// 0071479 // cellular response to ionizing radiation // inferred from mutant phenotype /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0012506 // vesicle membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0070436 // Grb2-EGFR complex // inferred from direct assay","0001784 // phosphotyrosine binding // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005070 // SH3/SH2 adaptor activity // inferred from electronic annotation /// 0005154 // epidermal growth factor receptor binding // inferred from physical interaction /// 0005154 // epidermal growth factor receptor binding // inferred from electronic annotation /// 0005168 // neurotrophin TRKA receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019903 // protein phosphatase binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0043560 // insulin receptor substrate binding // inferred from physical interaction /// 0043560 // insulin receptor substrate binding // inferred from electronic annotation /// 0046875 // ephrin receptor binding // inferred from physical interaction /// 0046875 // ephrin receptor binding // inferred from electronic annotation /// 0051219 // phosphoprotein binding // inferred from electronic annotation","chr17:73314156-73401796 (-) // 87.7 // q25.1"]
["11744338_a_at",-0.18244648,-0.19972229,-0.13582993,0.13582993,0.2535801,0.2778492,0.0022128797,0.0011718518,-1.3150212,-0.395086,1.3150212,"down","COPS7A",50813,"0010388 // cullin deneddylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008180 // signalosome // inferred from direct assay /// 0008180 // signalosome // inferred from electronic annotation","","chr12:6807789-6841031 (+) // 98.43 // p13.31"]
["11725056_a_at",0.2928586,0.2515025,0.42125177,-0.25150204,-0.38425827,-0.29211807,0.0016089604,0.00060944003,1.5488138,0.6311637,1.5488138,"up","NEDD9",4739,"0007010 // cytoskeleton organization // non-traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007229 // integrin-mediated signaling pathway // non-traceable author statement /// 0040008 // regulation of growth // inferred from electronic annotation /// 0051017 // actin filament bundle assembly // non-traceable author statement /// 0051301 // cell division // inferred from electronic annotation","0000922 // spindle pole // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005819 // spindle // traceable author statement /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr6:11183530-11232908 (-) // 97.73 // p24.2"]
["11737219_a_at",-0.4440384,-0.32178116,-0.36068726,0.32178116,0.4603157,0.46796036,0.0010771177,0.00018568568,-1.7316988,-0.792188,1.7316988,"down","ITGB1",3688,"0000082 // G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001708 // cell fate specification // inferred from electronic annotation /// 0001894 // tissue homeostasis // inferred from electronic annotation /// 0002042 // cell migration involved in sprouting angiogenesis // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0006968 // cellular defense response // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // traceable author statement /// 0007159 // leukocyte cell-cell adhesion // inferred from direct assay /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from mutant phenotype /// 0007161 // calcium-independent cell-matrix adhesion // inferred from genetic interaction /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008354 // germ cell migration // inferred from electronic annotation /// 0010811 // positive regulation of cell-substrate adhesion // inferred from electronic annotation /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0016477 // cell migration // traceable author statement /// 0030183 // B cell differentiation // inferred by curator /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0031345 // negative regulation of cell projection organization // inferred from electronic annotation /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0032594 // protein transport within lipid bilayer // inferred from electronic annotation /// 0033631 // cell-cell adhesion mediated by integrin // inferred from expression pattern /// 0034329 // cell junction assembly // traceable author statement /// 0034698 // response to gonadotropin stimulus // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from genetic interaction /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045214 // sarcomere organization // inferred from electronic annotation /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045807 // positive regulation of endocytosis // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050776 // regulation of immune response // traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0060135 // maternal process involved in female pregnancy // inferred from electronic annotation /// 0070830 // tight junction assembly // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from electronic annotation /// 0071305 // cellular response to vitamin D // inferred from electronic annotation /// 0071479 // cellular response to ionizing radiation // inferred from electronic annotation /// 0071559 // response to transforming growth factor beta stimulus // inferred from electronic annotation","0001669 // acrosomal vesicle // inferred from electronic annotation /// 0001726 // ruffle // traceable author statement /// 0005604 // basement membrane // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0008305 // integrin complex // non-traceable author statement /// 0008305 // integrin complex // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0014704 // intercalated disc // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030056 // hemidesmosome // inferred from electronic annotation /// 0031594 // neuromuscular junction // inferred from direct assay /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from direct assay /// 0034667 // alpha3-beta1 integrin complex // inferred from electronic annotation /// 0034678 // alpha8-beta1 integrin complex // traceable author statement /// 0034679 // alpha9-beta1 integrin complex // inferred from electronic annotation /// 0035748 // myelin sheath abaxonal region // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from direct assay /// 0042383 // sarcolemma // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation","0001948 // glycoprotein binding // inferred from electronic annotation /// 0001968 // fibronectin binding // inferred from electronic annotation /// 0002020 // protease binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from electronic annotation /// 0005178 // integrin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from electronic annotation /// 0019900 // kinase binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation /// 0043236 // laminin binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // non-traceable author statement /// 0051393 // alpha-actinin binding // inferred from electronic annotation","chr10:33189246-33247155 (-) // 91.17 // p11.22"]
["11754983_s_at",-0.16895676,-0.23441887,-0.21837711,0.22260284,0.16895676,0.2087555,0.00084399927,8.8779445e-5,-1.3262529,-0.40735593,1.3262529,"down","DAZAP1",26528,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007283 // spermatogenesis // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement","chr19:1425264-1435680 (+) // 98.23 // p13.3"]
["11719398_s_at",0.32915688,0.2040062,0.20364189,-0.20837402,-0.20364189,-0.3081665,0.0018405084,0.0008409903,1.4002286,0.48566246,1.4002286,"up","RRAGC",64121,"0006184 // GTP catabolic process // inferred from direct assay /// 0006351 // transcription, DNA-dependent // non-traceable author statement /// 0006915 // apoptotic process // non-traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0008380 // RNA splicing // non-traceable author statement /// 0016049 // cell growth // non-traceable author statement /// 0032008 // positive regulation of TOR signaling cascade // non-traceable author statement /// 0034613 // cellular protein localization // inferred from sequence or structural similarity /// 0071230 // cellular response to amino acid stimulus // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // non-traceable author statement /// 0003924 // GTPase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from electronic annotation /// 0019003 // GDP binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction","chr1:39303869-39325491 (-) // 91.45 // p34.3"]
["11735129_a_at",0.16569853,0.26429653,0.23512793,-0.5050788,-0.36123323,-0.16569853,0.0066572223,0.005281087,1.480117,0.5657112,1.480117,"up","SPC24",147841,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0031262 // Ndc80 complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr19:11256483-11266484 (-) // 39.8 // p13.2"]
["11723383_a_at",0.17187977,0.12327194,0.13630486,-0.12327194,-0.39683914,-0.33058882,0.008378251,0.0069433306,1.3447943,0.42738548,1.3447943,"up","PRR3",80742,"","","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:30524662-30532563 (+) // 86.84 // p21.33"]
["11722503_at",0.27173233,0.5903702,0.68226194,-0.39807224,-0.27173233,-0.40382195,0.0039384346,0.0026866843,1.8310404,0.8726636,1.8310404,"up","ITGB8",3696,"0001573 // ganglioside metabolic process // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0060674 // placenta blood vessel development // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0008305 // integrin complex // inferred from electronic annotation /// 0008305 // integrin complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from electronic annotation","chr7:20370724-20455382 (+) // 90.43 // p21.1"]
["11719665_a_at",-0.22250843,-0.13903332,-0.1900711,0.23372269,0.256876,0.13903332,0.0018172208,0.0008233059,-1.3138024,-0.39374828,1.3138024,"down","GFM1",85476,"0006184 // GTP catabolic process // inferred from direct assay /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006412 // translation // inferred from electronic annotation /// 0006414 // translational elongation // inferred from electronic annotation /// 0070125 // mitochondrial translational elongation // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // inferred from direct assay /// 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr3:158362082-158410439 (+) // 96.91 // q25.32"]
["11744083_at",0.100942135,0.12845135,0.08466816,-0.08466768,-0.3351555,-0.49683714,0.028420169,0.027220696,1.3289075,0.41024065,1.3289075,"up","ANKIB1",54467,"","","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:91875496-92030697 (+) // 99.09 // q21.2"]
["11734004_x_at",-0.25032902,-0.24337578,-0.24549103,0.24337578,0.3202629,0.30624294,0.0005921098,2.2694992e-5,-1.4503078,-0.53635913,1.4503078,"down","TMEM192","162967 /// 201931","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:165997230-166034071 (-) // 71.47 // q32.3"]
["11744739_a_at",0.18681955,0.16280746,0.123019695,-0.22292519,-0.39337158,-0.123019695,0.009042348,0.0075859143,1.3231602,0.4039877,1.3231602,"up","UBAP2L",9898,"0007339 // binding of sperm to zona pellucida // inferred from mutant phenotype","0005671 // Ada2/Gcn5/Ada3 transcription activator complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr1:154196959-154243981 (+) // 95.95 // q21.3"]
["11725637_a_at",-0.2609434,-0.32479,-0.31359196,0.38166046,0.29713058,0.2609434,0.0008942897,0.00011461672,-1.5294574,-0.61301994,1.5294574,"down","EIF3J",8669,"0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred by curator /// 0006413 // translational initiation // traceable author statement /// 0006413 // translational initiation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from direct assay","0003743 // translation initiation factor activity // inferred by curator /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr15:44829254-44855001 (+) // 91.33 // q21.1"]
["11753914_a_at",-0.275949,-0.19302797,-0.24172115,0.30630684,0.20278072,0.19302845,0.0013953822,0.00041306,-1.3860103,-0.47093803,1.3860103,"down","SSX2IP",117178,"0007155 // cell adhesion // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation","chr1:85109066-85156233 (-) // 92.98 // p22.3"]
["11763816_a_at",-0.18139935,-0.24628067,-0.15331459,0.15331459,0.30827618,0.18368912,0.0028598784,0.0017288154,-1.3275427,-0.40875816,1.3275427,"down","EIF3M",10480,"0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred by curator /// 0006413 // translational initiation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from direct assay","0003743 // translation initiation factor activity // inferred by curator /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr11:32605393-32622339 (+) // 84.58 // p13"]
["11731613_a_at",0.33489084,0.13138628,0.15509272,-0.18523884,-0.20879745,-0.1313858,0.006321074,0.0049790028,1.3033856,0.38226396,1.3033856,"up","RHEBL1",121268,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0031929 // TOR signaling cascade // inferred from mutant phenotype /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from electronic annotation","chr12:49458327-49463792 (-) // 89.06 // q13.12"]
["11732278_at",0.30209446,0.22585392,0.21374989,-0.21374989,-0.21988487,-0.2517929,0.0008452798,9.319191e-5,1.390601,0.47570863,1.390601,"up","FOXP1",27086,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0002053 // positive regulation of mesenchymal cell proliferation // not recorded /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0002329 // pre-B cell differentiation // not recorded /// 0002329 // pre-B cell differentiation // inferred from electronic annotation /// 0002639 // positive regulation of immunoglobulin production // not recorded /// 0002639 // positive regulation of immunoglobulin production // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007389 // pattern specification process // not recorded /// 0007507 // heart development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // not recorded /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from electronic annotation /// 0009790 // embryo development // not recorded /// 0009790 // embryo development // inferred from electronic annotation /// 0021517 // ventral spinal cord development // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0033152 // immunoglobulin V(D)J recombination // not recorded /// 0033152 // immunoglobulin V(D)J recombination // inferred from electronic annotation /// 0045214 // sarcomere organization // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048745 // smooth muscle tissue development // not recorded /// 0048745 // smooth muscle tissue development // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // not recorded /// 0055007 // cardiac muscle cell differentiation // not recorded /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0060043 // regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0060501 // positive regulation of epithelial cell proliferation involved in lung morphogenesis // not recorded /// 0072358 // cardiovascular system development // inferred from electronic annotation /// 2000727 // positive regulation of cardiac muscle cell differentiation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // not recorded /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // not recorded","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // not recorded /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // not recorded /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008134 // transcription factor binding // not recorded /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008301 // DNA binding, bending // not recorded /// 0042803 // protein homodimerization activity // not recorded /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // not recorded /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr3:71004732-71633140 (-) // 97.21 // p13"]
["11733792_a_at",0.124056816,0.096918106,0.14087296,-0.096918106,-0.34771156,-0.37389135,0.012968428,0.011596085,1.3135365,0.3934563,1.3135365,"up","SLC25A12",8604,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015810 // aspartate transport // inferred from direct assay /// 0015813 // L-glutamate transport // inferred from direct assay /// 0043490 // malate-aspartate shuttle // inferred from direct assay /// 0043490 // malate-aspartate shuttle // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0051592 // response to calcium ion // inferred from direct assay /// 0055085 // transmembrane transport // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005313 // L-glutamate transmembrane transporter activity // inferred from direct assay /// 0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0015183 // L-aspartate transmembrane transporter activity // inferred from direct assay","chr2:172639129-172751013 (-) // 81.4 // q31.1"]
["11758279_s_at",-0.7732172,-0.94277954,-1.0665426,1.0701189,0.7732172,0.84523106,0.0009194498,0.00012195975,-3.539884,-1.8237021,3.539884,"down","CORO1C",23603,"0006909 // phagocytosis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0030036 // actin cytoskeleton organization // not recorded","0015629 // actin cytoskeleton // not recorded /// 0015629 // actin cytoskeleton // traceable author statement","0003779 // actin binding // inferred from electronic annotation /// 0051015 // actin filament binding // not recorded","chr12:109038884-109039675 (-) // 90.41 // q24.11"]
["11747601_a_at",-0.20517159,-0.23556566,-0.242167,0.33396578,0.38894176,0.20517111,0.0016374901,0.000644559,-1.4509465,-0.5369943,1.4509465,"down","SLC25A14",9016,"0006810 // transport // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0006839 // mitochondrial transport // inferred from electronic annotation /// 0009060 // aerobic respiration // traceable author statement","0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005740 // mitochondrial envelope // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","","chrX:129473919-129505571 (+) // 98.62 // q26.1"]
["11738083_s_at",-0.42861462,-0.19885445,-0.29042482,0.2925005,0.31613493,0.19885445,0.0027256683,0.0016163846,-1.4898095,-0.5751279,1.4898095,"down","POC1B",282809,"0005975 // carbohydrate metabolic process // non-traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0016266 // O-glycan processing // traceable author statement /// 0030030 // cell projection organization // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from mutant phenotype /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0000139 // Golgi membrane // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0005813 // centrosome // inferred from direct assay /// 0005814 // centriole // inferred from direct assay /// 0005814 // centriole // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from direct assay /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0004653 // polypeptide N-acetylgalactosaminyltransferase activity // inferred from electronic annotation /// 0004653 // polypeptide N-acetylgalactosaminyltransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr12:89813504-89919801 (-) // 98.04 // q21.33"]
["11729317_a_at",0.32237244,0.21757507,0.3039322,-0.26547337,-0.30185223,-0.21757507,0.0010510733,0.00017880015,1.4569252,0.5429268,1.4569252,"up","UACA",55075,"0008630 // DNA damage response, signal transduction resulting in induction of apoptosis // inferred from electronic annotation /// 0008631 // induction of apoptosis by oxidative stress // inferred from electronic annotation /// 0009411 // response to UV // inferred from electronic annotation /// 0042307 // positive regulation of protein import into nucleus // inferred from electronic annotation /// 0042347 // negative regulation of NF-kappaB import into nucleus // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0050728 // negative regulation of inflammatory response // inferred from electronic annotation","0005576 // extracellular region // non-traceable author statement /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0043293 // apoptosome // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr15:70946894-70994647 (-) // 94.49 // q23"]
["11750554_a_at",0.603353,0.6968317,0.6914711,-0.603353,-0.749228,-0.8249812,0.00067191356,4.1885378e-5,2.6203134,1.3897394,2.6203134,"up","NEDD4",4734,"0006464 // cellular protein modification process // inferred from electronic annotation /// 0006622 // protein targeting to lysosome // inferred from direct assay /// 0007041 // lysosomal transport // inferred from direct assay /// 0007399 // nervous system development // inferred from electronic annotation /// 0010766 // negative regulation of sodium ion transport // inferred from direct assay /// 0010766 // negative regulation of sodium ion transport // inferred from electronic annotation /// 0010768 // negative regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage // inferred from mutant phenotype /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // inferred from mutant phenotype /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0019089 // transmission of virus // inferred from mutant phenotype /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0030948 // negative regulation of vascular endothelial growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0030948 // negative regulation of vascular endothelial growth factor receptor signaling pathway // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from expression pattern /// 0031623 // receptor internalization // inferred from direct assay /// 0032801 // receptor catabolic process // inferred from direct assay /// 0034644 // cellular response to UV // inferred from mutant phenotype /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0042921 // glucocorticoid receptor signaling pathway // inferred from direct assay /// 0043162 // ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway // inferred from mutant phenotype /// 0044111 // development involved in symbiotic interaction // inferred from mutant phenotype /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045732 // positive regulation of protein catabolic process // inferred from direct assay /// 0045732 // positive regulation of protein catabolic process // inferred from electronic annotation /// 0046824 // positive regulation of nucleocytoplasmic transport // inferred from direct assay /// 0048814 // regulation of dendrite morphogenesis // inferred from sequence or structural similarity /// 0048814 // regulation of dendrite morphogenesis // inferred from electronic annotation /// 0050847 // progesterone receptor signaling pathway // inferred from direct assay /// 0051592 // response to calcium ion // traceable author statement /// 0070534 // protein K63-linked ubiquitination // inferred from sequence or structural similarity","0000151 // ubiquitin ligase complex // inferred from sequence or structural similarity /// 0000151 // ubiquitin ligase complex // inferred from electronic annotation /// 0000785 // chromatin // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // not recorded /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from mutant phenotype /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005938 // cell cortex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016327 // apicolateral plasma membrane // traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0019871 // sodium channel inhibitor activity // inferred from direct assay /// 0019871 // sodium channel inhibitor activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0031698 // beta-2 adrenergic receptor binding // inferred from direct assay /// 0043130 // ubiquitin binding // inferred from direct assay /// 0050815 // phosphoserine binding // inferred from sequence or structural similarity /// 0050815 // phosphoserine binding // inferred from electronic annotation /// 0050816 // phosphothreonine binding // inferred from sequence or structural similarity /// 0050816 // phosphothreonine binding // inferred from electronic annotation /// 0070063 // RNA polymerase binding // inferred from physical interaction /// 0070064 // proline-rich region binding // inferred from mutant phenotype /// 0070064 // proline-rich region binding // inferred from physical interaction /// 0070064 // proline-rich region binding // inferred from electronic annotation","chr15:56119532-56209306 (-) // 94.93 // q21.3"]
["11728184_a_at",0.3304844,0.19350195,0.23690748,-0.19350195,-0.22454786,-0.23953009,0.001350818,0.0003758701,1.3878239,0.47282457,1.3878239,"up","PLEKHA7",144100,"0045218 // zonula adherens maintenance // inferred from mutant phenotype /// 0090136 // epithelial cell-cell adhesion // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0005915 // zonula adherens // inferred from direct assay /// 0030054 // cell junction // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation /// 0070097 // delta-catenin binding // inferred from direct assay","chr11:16809030-17035963 (-) // 97.85 // p15.1"]
["11756051_a_at",-0.27180958,-0.17656374,-0.24530792,0.17656326,0.3407836,0.21802902,0.0021334826,0.0011126819,-1.3912218,-0.4763524,1.3912218,"down","MTR",4548,"0000096 // sulfur amino acid metabolic process // traceable author statement /// 0006479 // protein methylation // inferred from electronic annotation /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009086 // methionine biosynthetic process // inferred from electronic annotation /// 0032259 // methylation // traceable author statement /// 0032259 // methylation // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042558 // pteridine-containing compound metabolic process // inferred from electronic annotation /// 0044237 // cellular metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046653 // tetrahydrofolate metabolic process // inferred from electronic annotation /// 0050667 // homocysteine metabolic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005542 // folic acid binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008705 // methionine synthase activity // inferred from electronic annotation /// 0008898 // homocysteine S-methyltransferase activity // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0031419 // cobalamin binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:236973859-236992557 (+) // 99.77 // q43"]
["11736447_at",-0.24905777,-0.24178314,-0.30927563,0.24178314,0.2525034,0.25291824,0.0005527764,1.8568715e-5,-1.4297608,-0.5157738,1.4297608,"down","TMPO",7112,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005521 // lamin binding // traceable author statement","chr12:98909407-98928706 (+) // 97.94 // q23.1"]
["11724668_at",0.4978981,0.43944836,0.40280247,-0.40280247,-0.4654274,-0.5514507,0.00070557836,5.6481284e-5,1.8920408,0.9199432,1.8920408,"up","INSL4",3641,"0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0007565 // female pregnancy // traceable author statement /// 0008283 // cell proliferation // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005625 // soluble fraction // traceable author statement","0005102 // receptor binding // traceable author statement /// 0005159 // insulin-like growth factor receptor binding // traceable author statement /// 0005179 // hormone activity // inferred from electronic annotation","chr9:5231401-5235528 (+) // 89.08 // p24.1"]
["11736245_a_at",0.18655252,0.24600315,0.15406322,-0.15406322,-0.18980503,-0.2779317,0.0019103753,0.00090664666,1.322077,0.40280628,1.322077,"up","PRKAG2",51422,"0005977 // glycogen metabolic process // inferred from mutant phenotype /// 0006110 // regulation of glycolysis // inferred from mutant phenotype /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006469 // negative regulation of protein kinase activity // inferred from direct assay /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006754 // ATP biosynthetic process // traceable author statement /// 0006853 // carnitine shuttle // traceable author statement /// 0007050 // cell cycle arrest // traceable author statement /// 0007243 // intracellular protein kinase cascade // inferred from mutant phenotype /// 0008152 // metabolic process // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0010800 // positive regulation of peptidyl-threonine phosphorylation // inferred from mutant phenotype /// 0016126 // sterol biosynthetic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019217 // regulation of fatty acid metabolic process // inferred from mutant phenotype /// 0042304 // regulation of fatty acid biosynthetic process // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045860 // positive regulation of protein kinase activity // inferred from mutant phenotype /// 0046320 // regulation of fatty acid oxidation // traceable author statement /// 0046324 // regulation of glucose import // traceable author statement /// 0050790 // regulation of catalytic activity // inferred from electronic annotation","0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0031588 // AMP-activated protein kinase complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004679 // AMP-activated protein kinase activity // inferred from electronic annotation /// 0004862 // cAMP-dependent protein kinase inhibitor activity // inferred from direct assay /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0008603 // cAMP-dependent protein kinase regulator activity // inferred from mutant phenotype /// 0008607 // phosphorylase kinase regulator activity // inferred from mutant phenotype /// 0016208 // AMP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from direct assay /// 0030295 // protein kinase activator activity // inferred from mutant phenotype /// 0043531 // ADP binding // inferred from direct assay","chr7:151253209-151329439 (-) // 93.91 // q36.1"]
["11736167_a_at",0.34866714,0.28668976,0.27404213,-0.27404213,-0.36850548,-0.34497452,0.00073653937,6.569419e-5,1.5500417,0.63230705,1.5500417,"up","CCDC34",91057,"","","","chr11:27370418-27384795 (-) // 92.04 // p14.1"]
["11730913_a_at",-0.13847971,-0.16924906,-0.16666031,0.46558237,0.4270749,0.13847971,0.009885796,0.008399947,-1.4160204,-0.501842,1.4160204,"down","ARHGAP12",94134,"0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation","chr10:32095233-32217804 (-) // 98.98 // p11.22"]
["11728799_at",0.17866516,0.14525795,0.2162857,-0.3373003,-0.14525795,-0.17937994,0.004360689,0.0030605765,1.3201627,0.40071568,1.3201627,"up","IMMP2L",83943,"0001541 // ovarian follicle development // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006627 // protein processing involved in protein targeting to mitochondrion // inferred from sequence or structural similarity /// 0006627 // protein processing involved in protein targeting to mitochondrion // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030728 // ovulation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042720 // mitochondrial inner membrane peptidase complex // inferred from sequence or structural similarity /// 0042720 // mitochondrial inner membrane peptidase complex // inferred from electronic annotation","0008233 // peptidase activity // inferred from sequence or structural similarity /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr7:110303112-111202347 (-) // 95.84 // q31.1"]
["11727713_at",0.19433784,0.24052525,0.22576714,-0.37357044,-0.19433784,-0.21187973,0.0022579338,0.0012125941,1.3948784,0.4801394,1.3948784,"up","LOC100653095","100653095 /// 3768","0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // traceable author statement /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0008015 // blood circulation // non-traceable author statement /// 0008016 // regulation of heart contraction // traceable author statement /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030315 // T-tubule // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005242 // inward rectifier potassium channel activity // inferred from electronic annotation /// 0005242 // inward rectifier potassium channel activity // inferred from direct assay /// 0005242 // inward rectifier potassium channel activity // traceable author statement /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0008200 // ion channel inhibitor activity // traceable author statement /// 0015459 // potassium channel regulator activity // traceable author statement /// 0030165 // PDZ domain binding // inferred from electronic annotation","chr17:21279508-21323181 (+) // 97.8 // p11.2"]
["11743343_at",-0.42564774,-0.392591,-0.37138748,0.42682934,0.4749651,0.37138748,0.00055139343,1.7117525e-5,-1.7665519,-0.8209361,1.7665519,"down","RMND5A",64795,"","","","chr2:86947171-87005163 (+) // 98.36 // p11.2"]
["11728191_x_at",-0.14374542,-0.22732067,-0.26251316,0.1999979,0.24015045,0.14374542,0.0018305046,0.00083504117,-1.3248457,-0.40582436,1.3248457,"down","CXCR4",7852,"0000187 // activation of MAPK activity // traceable author statement /// 0001569 // patterning of blood vessels // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from expression pattern /// 0001667 // ameboidal cell migration // inferred from electronic annotation /// 0001764 // neuron migration // inferred from electronic annotation /// 0002407 // dendritic cell chemotaxis // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // traceable author statement /// 0007281 // germ cell development // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from electronic annotation /// 0008354 // germ cell migration // inferred from electronic annotation /// 0009615 // response to virus // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0019059 // initiation of viral infection // traceable author statement /// 0019722 // calcium-mediated signaling // inferred from mutant phenotype /// 0030260 // entry into host cell // traceable author statement /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0042098 // T cell proliferation // inferred from electronic annotation /// 0043217 // myelin maintenance // inferred from sequence or structural similarity /// 0043217 // myelin maintenance // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0048699 // generation of neurons // inferred from electronic annotation /// 0048714 // positive regulation of oligodendrocyte differentiation // inferred from sequence or structural similarity /// 0048714 // positive regulation of oligodendrocyte differentiation // inferred from electronic annotation /// 0050920 // regulation of chemotaxis // inferred from mutant phenotype /// 0061351 // neural precursor cell proliferation // inferred from electronic annotation /// 0070098 // chemokine-mediated signaling pathway // inferred from electronic annotation","0005737 // cytoplasm // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0030426 // growth cone // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from direct assay","0003779 // actin binding // inferred from direct assay /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004950 // chemokine receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015026 // coreceptor activity // traceable author statement /// 0016494 // C-X-C chemokine receptor activity // non-traceable author statement /// 0016494 // C-X-C chemokine receptor activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0032027 // myosin light chain binding // inferred from direct assay /// 0043130 // ubiquitin binding // inferred from direct assay","chr2:136871919-136874273 (-) // 97.21 // q22.1"]
["11725627_at",-0.19221544,-0.24344015,-0.22392797,0.39626217,0.19221544,0.25711536,0.002311554,0.0012682687,-1.415906,-0.5017255,1.415906,"down","NIPAL3",57185,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:24742239-24799473 (+) // 86.99 // p36.11"]
["11720986_at",-0.3259983,-0.26686287,-0.24786663,0.24786663,0.2673607,0.25858307,0.0005959546,2.417038e-5,-1.4521388,-0.5381794,1.4521388,"down","YRDC",79693,"0051051 // negative regulation of transport // inferred from direct assay","0005624 // membrane fraction // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","","chr1:38268616-38273863 (-) // 80.16 // p34.3"]
["11748452_a_at",0.2378602,0.21924448,0.24972868,-0.219244,-0.29348946,-0.22058916,0.00070557836,5.1273848e-5,1.394794,0.480052,1.394794,"up","C9orf100",84904,"0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation","chr9:35662888-35665190 (-) // 99.9 // p13.3"]
["11724959_s_at",0.1477766,0.30043507,0.34254646,-0.22941923,-0.14777613,-0.17296648,0.0033916372,0.0021982833,1.3631774,0.44697332,1.3631774,"up","CDK14",5218,"0000086 // G2/M transition of mitotic cell cycle // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0060828 // regulation of canonical Wnt receptor signaling pathway // inferred from direct assay","0000308 // cytoplasmic cyclin-dependent protein kinase holoenzyme complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004693 // cyclin-dependent protein kinase activity // inferred from mutant phenotype /// 0004693 // cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0030332 // cyclin binding // inferred from physical interaction","chr7:90338711-90839904 (+) // 96.52 // q21.13"]
["11727840_at",0.49699497,0.38466358,0.21511555,-0.21511507,-0.27564716,-0.27480364,0.0029613448,0.0018153565,1.5377063,0.62078,1.5377063,"up","HPD",3242,"0006559 // L-phenylalanine catabolic process // inferred from electronic annotation /// 0006559 // L-phenylalanine catabolic process // traceable author statement /// 0006572 // tyrosine catabolic process // inferred from sequence or structural similarity /// 0006572 // tyrosine catabolic process // inferred from electronic annotation /// 0006572 // tyrosine catabolic process // traceable author statement /// 0009072 // aromatic amino acid family metabolic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003868 // 4-hydroxyphenylpyruvate dioxygenase activity // not recorded /// 0003868 // 4-hydroxyphenylpyruvate dioxygenase activity // inferred from sequence or structural similarity /// 0003868 // 4-hydroxyphenylpyruvate dioxygenase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016701 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:122087612-122326517 (-) // 91.18 // q24.31"]
["11716870_a_at",-0.42831898,-0.3648877,-0.56517076,0.7424779,0.4820571,0.3648877,0.0025672878,0.0014704964,-1.9760234,-0.9826001,1.9760234,"down","PHC2",1912,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0031519 // PcG protein complex // inferred from direct assay /// 0031519 // PcG protein complex // inferred from electronic annotation /// 0035102 // PRC1 complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:33789226-33815498 (-) // 87.37 // p35.1"]
["11734720_a_at",-0.42574406,-0.47454548,-0.5556669,0.50924015,0.47654247,0.42574406,0.0006216412,2.9067676e-5,-1.9396921,-0.9558277,1.9396921,"down","PPAP2C",8612,"0006665 // sphingolipid metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004721 // phosphoprotein phosphatase activity // traceable author statement /// 0008195 // phosphatidate phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr19:281042-291435 (-) // 96.8 // p13.3"]
["11718908_s_at",-0.40435505,-0.46791935,-0.53140736,0.61261654,0.48808098,0.40435505,0.0010089864,0.0001642536,-1.9582679,-0.96957815,1.9582679,"down","CHST2",9435,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006044 // N-acetylglucosamine metabolic process // inferred from direct assay /// 0006790 // sulfur compound metabolic process // inferred from direct assay /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031228 // intrinsic to Golgi membrane // non-traceable author statement","0001517 // N-acetylglucosamine 6-O-sulfotransferase activity // inferred from direct assay /// 0008146 // sulfotransferase activity // traceable author statement /// 0008146 // sulfotransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr3:142838172-142841812 (+) // 94.33 // q24"]
["11726773_a_at",-0.18131351,-0.21503544,-0.20273876,0.40158653,0.29322243,0.18131351,0.002677772,0.0015752957,-1.4061365,-0.4917367,1.4061365,"down","PRKCI",5584,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006612 // protein targeting to membrane // non-traceable author statement /// 0006916 // anti-apoptosis // traceable author statement /// 0007010 // cytoskeleton organization // non-traceable author statement /// 0007015 // actin filament organization // inferred from electronic annotation /// 0010976 // positive regulation of neuron projection development // inferred from mutant phenotype /// 0016044 // cellular membrane organization // non-traceable author statement /// 0016192 // vesicle-mediated transport // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from sequence or structural similarity /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement /// 0034351 // negative regulation of glial cell apoptotic process // inferred from mutant phenotype /// 0035089 // establishment of apical/basal cell polarity // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042462 // eye photoreceptor cell development // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from direct assay /// 0045197 // establishment or maintenance of epithelial cell apical/basal polarity // traceable author statement /// 0045216 // cell-cell junction organization // inferred from mutant phenotype /// 0045216 // cell-cell junction organization // traceable author statement /// 0046326 // positive regulation of glucose import // inferred from sequence or structural similarity /// 0046326 // positive regulation of glucose import // inferred from electronic annotation /// 0046903 // secretion // non-traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0060252 // positive regulation of glial cell proliferation // inferred from mutant phenotype /// 0070830 // tight junction assembly // traceable author statement /// 0090004 // positive regulation of establishment of protein localization in plasma membrane // inferred from sequence or structural similarity /// 0090004 // positive regulation of establishment of protein localization in plasma membrane // inferred from electronic annotation /// 2000353 // positive regulation of endothelial cell apoptotic process // inferred from mutant phenotype","0000133 // polarisome // traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0043220 // Schmidt-Lanterman incisure // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004697 // protein kinase C activity // inferred from sequence or structural similarity /// 0004697 // protein kinase C activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:169940152-170023771 (+) // 91.67 // q26.2"]
["11756164_s_at",0.33373642,0.22282219,0.27239895,-0.22282219,-0.26541424,-0.26974392,0.00089824985,0.00011682664,1.4429079,0.5289793,1.4429079,"up","ADIPOR2",79602,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0009755 // hormone-mediated signaling pathway // inferred from sequence or structural similarity /// 0019395 // fatty acid oxidation // inferred from sequence or structural similarity","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0042562 // hormone binding // inferred from sequence or structural similarity /// 0042802 // identical protein binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr12:1896887-1897845 (+) // 96.11 // p13.33"]
["11719490_a_at",-0.31792164,-0.3474579,-0.5207405,0.3556652,0.31792164,0.37704754,0.0013035384,0.00034132274,-1.6766539,-0.74558485,1.6766539,"down","TMEM189","387521 /// 387522","","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr20:48549554-48770271 (-) // 76.75 // q13.13"]
["11763803_a_at",0.1620717,0.18310928,0.15472698,-0.28739262,-0.15472746,-0.3082204,0.0020402276,0.0010332874,1.3349165,0.41674948,1.3349165,"up","TMEM67",91147,"0010826 // negative regulation of centrosome duplication // inferred from mutant phenotype /// 0030030 // cell projection organization // inferred from electronic annotation /// 0030433 // ER-associated protein catabolic process // inferred from mutant phenotype /// 0042384 // cilium assembly // inferred from mutant phenotype /// 0042384 // cilium assembly // inferred from electronic annotation /// 0060271 // cilium morphogenesis // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from direct assay /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0036038 // TCTN-B9D complex // inferred from sequence or structural similarity /// 0042995 // cell projection // inferred from electronic annotation /// 0060170 // cilium membrane // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0031005 // filamin binding // inferred from physical interaction /// 0051082 // unfolded protein binding // inferred from physical interaction","chr8:94767122-94822199 (+) // 97.08 // q22.1"]
["11753179_s_at",0.15013313,0.2308445,0.18316555,-0.15013313,-0.27897167,-0.38911915,0.0045107757,0.0032092168,1.3762944,0.46078902,1.3762944,"up","FAM134B",54463,"0019233 // sensory perception of pain // inferred from mutant phenotype","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005801 // cis-Golgi network // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr5:16473147-16478174 (-) // 89.2 // p15.1"]
["11745066_a_at",0.58384895,0.35616112,0.46445656,-0.43323946,-0.35616064,-0.547338,0.0014306394,0.0004455924,1.8839164,0.9137349,1.8839164,"up","MYT1L",23040,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:1792894-2335026 (-) // 94.04 // p25.3"]
["11743095_at",0.33021688,0.3958931,0.24856806,-0.39181042,-0.24856853,-0.45488644,0.0017505207,0.0007535252,1.6132624,0.6899811,1.6132624,"up","TMEM65",157378,"","0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr8:125323160-125384940 (-) // 94.28 // q24.13"]
["11747902_a_at",0.27298117,0.2736683,0.24318123,-0.24318123,-0.2589407,-0.28078842,0.00035482424,3.820244e-6,1.4381828,0.52424705,1.4381828,"up","EML1",2009,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005875 // microtubule associated complex // traceable author statement","0005509 // calcium ion binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr14:100239285-100406661 (+) // 94.55 // q32.2"]
["11715251_at",0.30463648,0.21179676,0.22068071,-0.29059887,-0.21179676,-0.288352,0.001091852,0.00020487046,1.4233469,0.50928724,1.4233469,"up","CHST7",56548,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005976 // polysaccharide metabolic process // traceable author statement /// 0006044 // N-acetylglucosamine metabolic process // inferred from direct assay /// 0006790 // sulfur compound metabolic process // inferred from direct assay /// 0030206 // chondroitin sulfate biosynthetic process // inferred from direct assay","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0001517 // N-acetylglucosamine 6-O-sulfotransferase activity // inferred from direct assay /// 0008146 // sulfotransferase activity // inferred from electronic annotation /// 0008459 // chondroitin 6-sulfotransferase activity // inferred from direct assay /// 0008459 // chondroitin 6-sulfotransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chrX:46433191-46457837 (+) // 94.94 // p11.23"]
["11719292_a_at",0.37299538,0.25217915,0.3110032,-0.25217867,-0.6852932,-0.83466864,0.008566836,0.00713903,1.869656,0.9027728,1.869656,"up","ITGB1BP1",9270,"0007160 // cell-matrix adhesion // inferred from direct assay /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // traceable author statement /// 0016477 // cell migration // traceable author statement","0001726 // ruffle // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // non-traceable author statement /// 0030027 // lamellipodium // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr2:9545809-9563695 (-) // 98.95 // p25.1"]
["11741433_a_at",0.15806198,0.3096323,0.27587032,-0.16389179,-0.15893555,-0.15806198,0.0018968133,0.0008895908,1.3269843,0.40815133,1.3269843,"up","ARCN1",372,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // traceable author statement /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0048205 // COPI coating of Golgi vesicle // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030126 // COPI vesicle coat // inferred from sequence or structural similarity /// 0030131 // clathrin adaptor complex // inferred from electronic annotation /// 0030663 // COPI coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","","chr11:118443101-118473745 (+) // 90.9 // q23.3"]
["11717663_a_at",0.23218822,0.16915321,0.2150569,-0.16915321,-0.21505642,-0.21234083,0.0007584205,7.2575895e-5,1.3234615,0.40431625,1.3234615,"up","KLHL12",59349,"0006513 // protein monoubiquitination // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from direct assay /// 0016055 // Wnt receptor signaling pathway // inferred from mutant phenotype /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0048208 // COPII vesicle coating // inferred from mutant phenotype","0030134 // ER to Golgi transport vesicle // inferred from direct assay /// 0030134 // ER to Golgi transport vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031463 // Cul3-RING ubiquitin ligase complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr1:202860247-202896390 (-) // 93.11 // q32.1"]
["11727805_a_at",-0.35442495,-0.4142766,-0.44758892,0.35442495,0.48450708,0.4080758,0.0007223185,6.0700248e-5,-1.7667519,-0.82109946,1.7667519,"down","UBE2W",55284,"0006281 // DNA repair // inferred from electronic annotation /// 0006513 // protein monoubiquitination // inferred from direct assay /// 0006513 // protein monoubiquitination // inferred from mutant phenotype /// 0006515 // misfolded or incompletely synthesized protein catabolic process // inferred from sequence or structural similarity /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay /// 0071218 // cellular response to misfolded protein // inferred from sequence or structural similarity","0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // inferred from mutant phenotype /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr8:74702846-74742709 (-) // 93.53 // q21.11"]
["11740778_x_at",0.5029993,0.6416111,0.725173,-0.542191,-0.5512023,-0.5029988,0.00073132804,6.425104e-5,2.2274482,1.1553919,2.2274482,"up","KIAA0825",285600,"","","","chr5:93486555-93954309 (-) // 88.07 // q15"]
["11717399_a_at",-0.258873,-0.17819214,-0.2587204,0.2357235,0.2626953,0.17819214,0.0011442282,0.00023684064,-1.3731275,-0.4574655,1.3731275,"down","TIPARP",25976,"0001570 // vasculogenesis // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0006471 // protein ADP-ribosylation // inferred from electronic annotation /// 0006807 // nitrogen compound metabolic process // inferred from electronic annotation /// 0008209 // androgen metabolic process // inferred from electronic annotation /// 0008210 // estrogen metabolic process // inferred from electronic annotation /// 0008585 // female gonad development // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0044236 // multicellular organismal metabolic process // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0048745 // smooth muscle tissue development // inferred from electronic annotation /// 0060021 // palate development // inferred from electronic annotation /// 0060325 // face morphogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003950 // NAD+ ADP-ribosyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:156392130-156424668 (+) // 96.82 // q25.31"]
["11721770_x_at",0.35361195,0.19835854,0.44119787,-0.28756428,-0.19835854,-0.3149824,0.0027702658,0.0016523765,1.5136424,0.5980245,1.5136424,"up","CCDC64",92558,"0006810 // transport // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0055107 // Golgi to secretory granule transport // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from sequence or structural similarity /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0017137 // Rab GTPase binding // inferred from sequence or structural similarity /// 0034452 // dynactin binding // inferred from sequence or structural similarity","chr12:120427547-120532298 (+) // 95.24 // q24.23"]
["11718399_s_at",-0.27346516,-0.23360062,-0.24606323,0.3848343,0.26976013,0.23360062,0.0012591777,0.00031366711,-1.4611537,-0.547108,1.4611537,"down","TGM2",7052,"0001974 // blood vessel remodeling // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0007200 // phospholipase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0018149 // peptide cross-linking // inferred from electronic annotation /// 0018153 // isopeptide cross-linking via N6-(L-isoglutamyl)-L-lysine // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0043277 // apoptotic cell clearance // inferred from direct assay /// 0045785 // positive regulation of cell adhesion // inferred from sequence or structural similarity /// 0045785 // positive regulation of cell adhesion // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0051482 // elevation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway // inferred from electronic annotation /// 0060445 // branching involved in salivary gland morphogenesis // inferred from electronic annotation /// 0060662 // salivary gland cavitation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation","0003810 // protein-glutamine gamma-glutamyltransferase activity // inferred from sequence or structural similarity /// 0003810 // protein-glutamine gamma-glutamyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:36756862-36793676 (-) // 87.32 // q11.23"]
["11725334_at",0.54482603,0.54359436,0.60623693,-0.5986681,-0.54359436,-0.75640774,0.0007085977,5.7676556e-5,2.2938576,1.1977758,2.2938576,"up","MZT1",440145,"0033566 // gamma-tubulin complex localization // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0008274 // gamma-tubulin ring complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr13:73282504-73302001 (-) // 96.63 // q21.33"]
["11717840_at",-0.45344687,-0.6380682,-0.5083251,0.50793314,0.5273609,0.4534464,0.0007292708,6.348577e-5,-2.041355,-1.029527,2.041355,"down","ETNK1",55500,"0006646 // phosphatidylethanolamine biosynthetic process // inferred from direct assay /// 0006646 // phosphatidylethanolamine biosynthetic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004305 // ethanolamine kinase activity // inferred from direct assay /// 0004305 // ethanolamine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation","chr12:22778008-22843599 (+) // 97.35 // p12.1"]
["11734252_at",-0.3062296,-0.5170517,-0.58246565,0.43157005,0.48750925,0.3062291,0.0019051586,0.00089975516,-1.8365759,-0.87701845,1.8365759,"down","TMEM87A",25963,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr15:42548149-42565755 (-) // 44.79 // q15.1"]
["11754316_a_at",-0.30077744,-0.21110344,-0.2597475,0.32582855,0.24999237,0.21110344,0.0011846017,0.00025720376,-1.4334757,-0.51951754,1.4334757,"down","PIK3R3",8503,"0007596 // blood coagulation // traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0031295 // T cell costimulation // traceable author statement /// 0036092 // phosphatidylinositol-3-phosphate biosynthetic process // traceable author statement /// 0043551 // regulation of phosphatidylinositol 3-kinase activity // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0005942 // phosphatidylinositol 3-kinase complex // inferred from electronic annotation","0016301 // kinase activity // inferred from electronic annotation /// 0016303 // 1-phosphatidylinositol-3-kinase activity // traceable author statement /// 0035014 // phosphatidylinositol 3-kinase regulator activity // inferred from electronic annotation /// 0046935 // 1-phosphatidylinositol-3-kinase regulator activity // inferred from electronic annotation","chr1:46505811-46598467 (-) // 99.54 // p34.1"]
["11747886_a_at",0.16261482,0.116337776,0.12150097,-0.116337776,-0.26591206,-0.3998003,0.010486735,0.009041535,1.3141845,0.3941679,1.3141845,"up","RAD51AP1",10635,"0000724 // double-strand break repair via homologous recombination // non-traceable author statement /// 0006281 // DNA repair // non-traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from direct assay /// 0003690 // double-stranded DNA binding // traceable author statement /// 0003697 // single-stranded DNA binding // inferred from direct assay /// 0003697 // single-stranded DNA binding // traceable author statement /// 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr12:4648016-4668496 (+) // 99.2 // p13.32"]
["11737063_a_at",0.08654547,0.13154316,0.13401794,-0.51568747,-0.08654547,-0.18407059,0.04527035,0.044061583,1.3008639,0.37947002,1.3008639,"up","MTL5",9633,"0006875 // cellular metal ion homeostasis // non-traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // non-traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0010038 // response to metal ion // non-traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation","0005625 // soluble fraction // inferred from sequence or structural similarity /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation","0046872 // metal ion binding // non-traceable author statement","chr11:68503599-68519032 (-) // 86.02 // q13.3"]
["11745739_a_at",0.24760342,0.26189852,0.2717476,-0.24788809,-0.24760294,-0.48516798,0.002928729,0.001785995,1.5024352,0.5873028,1.5024352,"up","SCOC",60592,"0016239 // positive regulation of macroautophagy // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr4:141294663-141302830 (+) // 93.69 // q31.1"]
["11742205_a_at",-0.32082987,-0.45978165,-0.46127224,0.52864456,0.40775108,0.32082987,0.0013707393,0.00039669973,-1.7814307,-0.8330364,1.7814307,"down","CCDC68",80323,"","","","chr18:52568741-52625279 (-) // 87.08 // q21.2"]
["11745807_a_at",-0.23413086,-0.37193346,-0.617712,0.31178284,0.26805305,0.23413086,0.005385936,0.0040359725,-1.6013045,-0.67924774,1.6013045,"down","AMMECR1L",83607,"","","","chr2:128619203-128643635 (-) // 96.73 // q14.3"]
["11755223_a_at",-0.50474215,-0.38550568,-0.4986372,0.40867424,0.42619514,0.38550568,0.0006160735,2.7858621e-5,-1.8273505,-0.86975336,1.8273505,"down","JHDM1D",80853,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030901 // midbrain development // inferred from sequence or structural similarity /// 0033169 // histone H3-K9 demethylation // inferred from direct assay /// 0033169 // histone H3-K9 demethylation // inferred from electronic annotation /// 0035574 // histone H4-K20 demethylation // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070544 // histone H3-K36 demethylation // inferred from direct assay /// 0071557 // histone H3-K27 demethylation // inferred from direct assay /// 0071557 // histone H3-K27 demethylation // inferred from electronic annotation","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0005506 // iron ion binding // inferred from direct assay /// 0005506 // iron ion binding // traceable author statement /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from direct assay /// 0032454 // histone demethylase activity (H3-K9 specific) // inferred from direct assay /// 0032454 // histone demethylase activity (H3-K9 specific) // inferred from electronic annotation /// 0035064 // methylated histone residue binding // inferred from direct assay /// 0035575 // histone demethylase activity (H4-K20 specific) // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051864 // histone demethylase activity (H3-K36 specific) // inferred from direct assay /// 0071558 // histone demethylase activity (H3-K27 specific) // inferred from direct assay /// 0071558 // histone demethylase activity (H3-K27 specific) // inferred from electronic annotation","chr7:139784655-139813384 (-) // 93.8 // q34"]
["11759552_at",0.3290205,0.24190569,0.28350687,-0.34240294,-0.24190569,-0.2791071,0.00091646257,0.00012077414,1.4872181,0.5726162,1.4872181,"up","MPI",4351,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0009298 // GDP-mannose biosynthetic process // inferred from electronic annotation /// 0009298 // GDP-mannose biosynthetic process // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004476 // mannose-6-phosphate isomerase activity // inferred from electronic annotation /// 0004476 // mannose-6-phosphate isomerase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:75182376-75191778 (+) // 84.15 // q24.1"]
["11729035_at",-0.25453472,-0.29104137,-0.25212955,0.26396656,0.37026215,0.25212955,0.0009735221,0.00014398387,-1.4756541,-0.56135464,1.4756541,"down","ITPRIPL2",162073,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr16:19125271-19132951 (+) // 82.42 // p12.3"]
["11724942_x_at",0.5379491,0.15894222,0.10871315,-0.10871315,-0.14078188,-0.115246296,0.046502918,0.04538104,1.3104981,0.39011526,1.3104981,"up","MAPK8IP2",23542,"0000165 // MAPK cascade // inferred from direct assay /// 0001662 // behavioral fear response // inferred from sequence or structural similarity /// 0001662 // behavioral fear response // inferred from electronic annotation /// 0007172 // signal complex assembly // traceable author statement /// 0007254 // JNK cascade // inferred from electronic annotation /// 0007617 // mating behavior // inferred from electronic annotation /// 0010469 // regulation of receptor activity // inferred from sequence or structural similarity /// 0010469 // regulation of receptor activity // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032874 // positive regulation of stress-activated MAPK cascade // inferred from electronic annotation /// 0035176 // social behavior // inferred from sequence or structural similarity /// 0035176 // social behavior // inferred from electronic annotation /// 0045768 // positive regulation of anti-apoptosis // non-traceable author statement /// 0045860 // positive regulation of protein kinase activity // inferred from direct assay /// 0045860 // positive regulation of protein kinase activity // inferred from genetic interaction /// 0046328 // regulation of JNK cascade // inferred from direct assay /// 0046958 // nonassociative learning // inferred from sequence or structural similarity /// 0046958 // nonassociative learning // inferred from electronic annotation /// 0048813 // dendrite morphogenesis // inferred from sequence or structural similarity /// 0048813 // dendrite morphogenesis // inferred from electronic annotation /// 0051966 // regulation of synaptic transmission, glutamatergic // inferred from sequence or structural similarity /// 0051966 // regulation of synaptic transmission, glutamatergic // inferred from electronic annotation /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from sequence or structural similarity /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from electronic annotation /// 2000310 // regulation of N-methyl-D-aspartate selective glutamate receptor activity // inferred from sequence or structural similarity /// 2000310 // regulation of N-methyl-D-aspartate selective glutamate receptor activity // inferred from electronic annotation /// 2000311 // regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity // inferred from sequence or structural similarity /// 2000311 // regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from sequence or structural similarity /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0001540 // beta-amyloid binding // non-traceable author statement /// 0005078 // MAP-kinase scaffold activity // non-traceable author statement /// 0005198 // structural molecule activity // traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0019894 // kinesin binding // inferred from sequence or structural similarity /// 0019894 // kinesin binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0030295 // protein kinase activator activity // inferred from direct assay /// 0030295 // protein kinase activator activity // inferred from genetic interaction /// 0032403 // protein complex binding // inferred from electronic annotation","chr22:51039111-51049977 (+) // 87.96 // q13.33"]
["11717473_s_at",-0.23962593,-0.18594074,-0.22459984,0.21564484,0.28528547,0.18594122,0.0010769006,0.00018458503,-1.3619553,-0.44567937,1.3619553,"down","IGFBP1",3484,"0001558 // regulation of cell growth // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0042246 // tissue regeneration // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement","0005520 // insulin-like growth factor binding // inferred from electronic annotation /// 0005520 // insulin-like growth factor binding // traceable author statement /// 0019838 // growth factor binding // inferred from electronic annotation","chr7:45927955-45933261 (+) // 94.78 // p12.3"]
["11730939_at",-0.22764492,-0.23496723,-0.22299385,0.24565458,0.34811735,0.22299385,0.001091852,0.00020464629,-1.4149888,-0.5007906,1.4149888,"down","ZBTB8A",653121,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:33004743-33071551 (+) // 73.39 // p35.1"]
["11721472_a_at",0.16445827,0.25144958,0.19335175,-0.16445827,-0.2385912,-0.19536495,0.001213793,0.00027218866,1.3218496,0.40255803,1.3218496,"up","HCCS",3052,"0009887 // organ morphogenesis // traceable author statement /// 0055114 // oxidation-reduction process // traceable author statement","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0004408 // holocytochrome-c synthase activity // inferred from electronic annotation /// 0004408 // holocytochrome-c synthase activity // traceable author statement /// 0016829 // lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:11129417-11141195 (+) // 91.07 // p22.2"]
["11716903_a_at",-0.44933748,-0.54441977,-0.5109954,0.449337,0.54946613,0.50225735,0.0005467525,1.5305302e-5,-2.0026882,-1.0019377,2.0026882,"down","TGOLN2",10618,"","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030133 // transport vesicle // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr2:85545145-85555407 (-) // 91.76 // p11.2"]
["11724037_at",-0.31471443,-0.34668732,-0.22961521,0.23436546,0.3322487,0.22961521,0.0012584343,0.00031259237,-1.4767396,-0.5624155,1.4767396,"down","PTGS2",5743,"0001516 // prostaglandin biosynthetic process // inferred from sequence or structural similarity /// 0001516 // prostaglandin biosynthetic process // non-traceable author statement /// 0001516 // prostaglandin biosynthetic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006692 // prostanoid metabolic process // traceable author statement /// 0006693 // prostaglandin metabolic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007566 // embryo implantation // inferred from electronic annotation /// 0007613 // memory // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from sequence or structural similarity /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0009750 // response to fructose stimulus // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010042 // response to manganese ion // inferred from electronic annotation /// 0010243 // response to organic nitrogen // inferred from electronic annotation /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from sequence or structural similarity /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0019371 // cyclooxygenase pathway // inferred from direct assay /// 0019371 // cyclooxygenase pathway // inferred from electronic annotation /// 0030282 // bone mineralization // inferred from electronic annotation /// 0030728 // ovulation // inferred from electronic annotation /// 0031394 // positive regulation of prostaglandin biosynthetic process // non-traceable author statement /// 0031622 // positive regulation of fever generation // inferred from sequence or structural similarity /// 0031622 // positive regulation of fever generation // inferred from electronic annotation /// 0031915 // positive regulation of synaptic plasticity // inferred from electronic annotation /// 0032227 // negative regulation of synaptic transmission, dopaminergic // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0033280 // response to vitamin D // inferred from electronic annotation /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042640 // anagen // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from sequence or structural similarity /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from electronic annotation /// 0045907 // positive regulation of vasoconstriction // inferred from electronic annotation /// 0045987 // positive regulation of smooth muscle contraction // inferred from electronic annotation /// 0046697 // decidualization // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050727 // regulation of inflammatory response // non-traceable author statement /// 0050873 // brown fat cell differentiation // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0051926 // negative regulation of calcium ion transport // inferred from electronic annotation /// 0051968 // positive regulation of synaptic transmission, glutamatergic // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from expression pattern /// 0071636 // positive regulation of transforming growth factor beta production // inferred from sequence or structural similarity /// 0071636 // positive regulation of transforming growth factor beta production // inferred from electronic annotation /// 0090050 // positive regulation of cell migration involved in sprouting angiogenesis // inferred from sequence or structural similarity /// 0090050 // positive regulation of cell migration involved in sprouting angiogenesis // inferred from electronic annotation /// 0090271 // positive regulation of fibroblast growth factor production // inferred from sequence or structural similarity /// 0090271 // positive regulation of fibroblast growth factor production // inferred from electronic annotation /// 0090336 // positive regulation of brown fat cell differentiation // inferred from sequence or structural similarity /// 0090336 // positive regulation of brown fat cell differentiation // inferred from electronic annotation /// 0090362 // positive regulation of platelet-derived growth factor production // inferred from sequence or structural similarity /// 0090362 // positive regulation of platelet-derived growth factor production // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005901 // caveola // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043005 // neuron projection // inferred from direct assay /// 0043005 // neuron projection // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0004601 // peroxidase activity // inferred from electronic annotation /// 0004601 // peroxidase activity // non-traceable author statement /// 0004601 // peroxidase activity // traceable author statement /// 0004666 // prostaglandin-endoperoxide synthase activity // inferred from direct assay /// 0004666 // prostaglandin-endoperoxide synthase activity // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0020037 // heme binding // inferred from electronic annotation /// 0020037 // heme binding // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:186640956-186649556 (-) // 95.15 // q31.1"]
["11719788_s_at",0.29900265,0.1870985,0.2294035,-0.1870985,-0.2978983,-0.40028286,0.0026605518,0.0015617278,1.4475315,0.5335947,1.4475315,"up","TUBB2A",7280,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0007017 // microtubule-based process // inferred from electronic annotation /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0051258 // protein polymerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation","chr6:3153911-3157809 (-) // 96.98 // p25.2"]
["11759599_at",-0.3494811,-0.29730988,-0.44819975,0.32130003,0.33214474,0.2973094,0.0008942897,0.000114727496,-1.6042677,-0.6819149,1.6042677,"down","PNISR",25957,"","0005634 // nucleus // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","","chr6:99856014-99873184 (-) // 89.06 // q16.2"]
["11717703_a_at",-0.2511692,-0.2978239,-0.22525978,0.41199112,0.22525978,0.24928856,0.0018968133,0.0008902827,-1.467741,-0.55359745,1.467741,"down","KIFC3",3801,"0007017 // microtubule-based process // inferred from electronic annotation /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0007030 // Golgi organization // inferred from electronic annotation /// 0007601 // visual perception // traceable author statement /// 0045218 // zonula adherens maintenance // inferred from mutant phenotype /// 0090136 // epithelial cell-cell adhesion // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005871 // kinesin complex // inferred from electronic annotation /// 0005871 // kinesin complex // traceable author statement /// 0005874 // microtubule // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0005915 // zonula adherens // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003777 // microtubule motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation","chr16:57792128-57836439 (-) // 94.84 // q21"]
["11753421_a_at",0.17455816,0.13670778,0.1363883,-0.1363883,-0.4175396,-0.47295475,0.010849081,0.009426419,1.4059179,0.4915123,1.4059179,"up","CITED2",10370,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0001568 // blood vessel development // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from direct assay /// 0001666 // response to hypoxia // inferred from mutant phenotype /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001829 // trophectodermal cell differentiation // inferred from electronic annotation /// 0001841 // neural tube formation // inferred from electronic annotation /// 0001843 // neural tube closure // inferred from electronic annotation /// 0001889 // liver development // inferred from sequence or structural similarity /// 0001889 // liver development // inferred from electronic annotation /// 0001892 // embryonic placenta development // inferred from electronic annotation /// 0001944 // vasculature development // inferred from electronic annotation /// 0001947 // heart looping // inferred from electronic annotation /// 0002089 // lens morphogenesis in camera-type eye // inferred from electronic annotation /// 0002244 // hemopoietic progenitor cell differentiation // inferred from electronic annotation /// 0002521 // leukocyte differentiation // inferred from electronic annotation /// 0003151 // outflow tract morphogenesis // inferred from sequence or structural similarity /// 0003151 // outflow tract morphogenesis // inferred from electronic annotation /// 0003156 // regulation of organ formation // inferred from sequence or structural similarity /// 0003197 // endocardial cushion development // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from sequence or structural similarity /// 0006950 // response to stress // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from sequence or structural similarity /// 0007417 // central nervous system development // inferred from electronic annotation /// 0007422 // peripheral nervous system development // inferred from electronic annotation /// 0007507 // heart development // inferred from mutant phenotype /// 0007507 // heart development // inferred from sequence or structural similarity /// 0007530 // sex determination // inferred from sequence or structural similarity /// 0008283 // cell proliferation // inferred from direct assay /// 0008584 // male gonad development // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0010629 // negative regulation of gene expression // inferred from direct assay /// 0021602 // cranial nerve morphogenesis // inferred from electronic annotation /// 0022409 // positive regulation of cell-cell adhesion // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030325 // adrenal gland development // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from mutant phenotype /// 0030511 // positive regulation of transforming growth factor beta receptor signaling pathway // inferred from sequence or structural similarity /// 0030851 // granulocyte differentiation // inferred from electronic annotation /// 0034405 // response to fluid shear stress // inferred from mutant phenotype /// 0035360 // positive regulation of peroxisome proliferator activated receptor signaling pathway // inferred from direct assay /// 0035802 // adrenal cortex formation // inferred from sequence or structural similarity /// 0043627 // response to estrogen stimulus // inferred from direct assay /// 0045787 // positive regulation of cell cycle // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046697 // decidualization // inferred from electronic annotation /// 0048536 // spleen development // inferred from sequence or structural similarity /// 0048538 // thymus development // inferred from electronic annotation /// 0048596 // embryonic camera-type eye morphogenesis // inferred from electronic annotation /// 0048821 // erythrocyte development // inferred from electronic annotation /// 0060136 // embryonic process involved in female pregnancy // inferred from electronic annotation /// 0060349 // bone morphogenesis // inferred from electronic annotation /// 0060411 // cardiac septum morphogenesis // inferred from electronic annotation /// 0060412 // ventricular septum morphogenesis // inferred from sequence or structural similarity /// 0060971 // embryonic heart tube left/right pattern formation // inferred from sequence or structural similarity /// 0061156 // pulmonary artery morphogenesis // inferred from electronic annotation /// 0061308 // cardiac neural crest cell development involved in heart development // inferred from electronic annotation /// 0061371 // determination of heart left/right asymmetry // inferred from electronic annotation /// 0070986 // left/right axis specification // inferred from sequence or structural similarity /// 1900164 // nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry // inferred from sequence or structural similarity /// 2000020 // positive regulation of male gonad development // inferred from sequence or structural similarity","0000790 // nuclear chromatin // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from mutant phenotype /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from mutant phenotype","0001102 // RNA polymerase II activating transcription factor binding // inferred from electronic annotation /// 0001105 // RNA polymerase II transcription coactivator activity // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from sequence or structural similarity /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0046332 // SMAD binding // inferred from electronic annotation /// 0050693 // LBD domain binding // inferred from physical interaction","chr6:139694210-139695742 (-) // 99.89 // q24.1"]
["11741015_a_at",-0.23296928,-0.19342041,-0.21761131,0.19663048,0.19342041,0.22669601,0.000520106,1.1423517e-5,-1.3381587,-0.4202493,1.3381587,"down","CDCA8",55143,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000089 // mitotic metaphase // inferred from mutant phenotype /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0051276 // chromosome organization // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from direct assay /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0032133 // chromosome passenger complex // inferred from physical interaction /// 0043234 // protein complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr1:38158100-38175389 (+) // 97.19 // p34.3"]
["11734796_s_at",0.47293377,0.18805265,0.14682198,-0.21157932,-0.14682198,-0.23240042,0.012968428,0.011600098,1.3814692,0.4662034,1.3814692,"up","HIST1H2BI","8339 /// 8343 /// 8344 /// 8346 /// 8347","0006334 // nucleosome assembly // non-traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation","0000786 // nucleosome // non-traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr6:26215416-26216920 (-) // 47.43 // p22.2"]
["11741700_s_at",0.45042133,0.49298048,0.356153,-0.7039714,-0.356153,-0.74284554,0.0023907758,0.0013292384,2.0479422,1.0341749,2.0479422,"up","HIST1H2BJ",8970,"0006334 // nucleosome assembly // non-traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation","0000786 // nucleosome // non-traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr6:27099769-27100575 (-) // 99.5 // p22.1"]
["11743389_s_at",-0.42972088,-0.4603138,-0.29246616,0.29246616,0.49702835,0.38522148,0.001558285,0.0005597365,-1.7239751,-0.78573895,1.7239751,"down","PHTF2",57157,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation","chr7:77428108-77586819 (+) // 97.85 // q11.23"]
["11745290_a_at",0.1923337,0.2292633,0.18509197,-0.18509197,-0.29210472,-0.3196602,0.0013953822,0.00041471564,1.3830454,0.4678486,1.3830454,"up","PHTF1",10745,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005801 // cis-Golgi network // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement","chr1:114246262-114302134 (-) // 91.25 // p13.2"]
["11723957_x_at",-0.2917223,-0.38069487,-0.28757095,0.3247471,0.32120323,0.28757095,0.00067191356,4.1958425e-5,-1.5488204,-0.6311698,1.5488204,"down","LSM5",23658,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006397 // mRNA processing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr7:32525083-32530028 (-) // 71.48 // p14.3"]
["11719915_x_at",0.24518299,0.24330139,0.16119242,-0.24305344,-0.16119194,-0.3176403,0.0019911786,0.0009921592,1.3728628,0.45718747,1.3728628,"up","AIF1L",83543,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005884 // actin filament // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from direct assay","chr9:133971862-133998531 (+) // 85.97 // q34.12"]
["11753860_a_at",0.28073025,0.15523052,0.26379633,-0.23647308,-0.17701054,-0.15523052,0.0017953549,0.00079175,1.3405488,0.42282373,1.3405488,"up","GNG4",2786,"0006112 // energy reserve metabolic process // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // traceable author statement /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0071377 // cellular response to glucagon stimulus // traceable author statement","0005834 // heterotrimeric G-protein complex // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation","chr1:235715408-235747138 (-) // 99.56 // q42.3"]
["11715863_x_at",0.37894726,0.12786102,0.15408516,-0.20605564,-0.18918324,-0.12786102,0.010443292,0.008995083,1.314637,0.39466447,1.314637,"up","DDAH2",23564,"0000052 // citrulline metabolic process // inferred from direct assay /// 0006525 // arginine metabolic process // inferred from electronic annotation /// 0006527 // arginine catabolic process // traceable author statement /// 0006809 // nitric oxide biosynthetic process // traceable author statement /// 0006916 // anti-apoptosis // traceable author statement /// 0007263 // nitric oxide mediated signal transduction // traceable author statement /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation","0003824 // catalytic activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016403 // dimethylargininase activity // inferred from direct assay /// 0016403 // dimethylargininase activity // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016813 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines // inferred from electronic annotation","chr6:31694503-31698040 (-) // 97.15 // p21.33"]
["11748534_a_at",0.5359559,0.56609726,0.44967175,-0.5436821,-0.7062073,-0.44967175,0.0010877973,0.00019535379,2.119556,1.083762,2.119556,"up","DDAH1",23576,"0000052 // citrulline metabolic process // inferred from direct assay /// 0003073 // regulation of systemic arterial blood pressure // inferred from sequence or structural similarity /// 0003073 // regulation of systemic arterial blood pressure // inferred from electronic annotation /// 0006525 // arginine metabolic process // inferred from electronic annotation /// 0006527 // arginine catabolic process // traceable author statement /// 0007263 // nitric oxide mediated signal transduction // traceable author statement /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from sequence or structural similarity /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","0003824 // catalytic activity // traceable author statement /// 0016403 // dimethylargininase activity // inferred from direct assay /// 0016403 // dimethylargininase activity // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016813 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:85786543-85930280 (-) // 99.04 // p22.3"]
["11743452_s_at",-0.17842484,-0.26861858,-0.4025917,0.2299242,0.17842484,0.23125362,0.0029613294,0.001811099,-1.4107013,-0.49641258,1.4107013,"down","CDCA4",55038,"0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","","chr14:105475909-105487425 (-) // 99.84 // q32.33"]
["11728682_at",-0.2825451,-0.24198532,-0.33767605,0.2681713,0.24198532,0.30407333,0.0007578133,7.179971e-5,-1.4730558,-0.55881214,1.4730558,"down","KRR1",11103,"0006364 // rRNA processing // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation","chr12:75891166-75905448 (-) // 84.56 // q21.2"]
["11729516_a_at",-0.3625517,-0.4163046,-0.29869843,0.45908928,0.49367237,0.29869843,0.0013175306,0.00035576732,-1.7127781,-0.7763382,1.7127781,"down","ZNF644",84146,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:91380860-91487921 (-) // 98.54 // p22.2"]
["11759302_at",0.25613594,0.18105125,0.19559193,-0.18105125,-0.25560188,-0.2227087,0.0010184328,0.00016622998,1.3479002,0.43071365,1.3479002,"up","ROCK2",9475,"0000910 // cytokinesis // inferred from electronic annotation /// 0000910 // cytokinesis // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006939 // smooth muscle contraction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0010825 // positive regulation of centrosome duplication // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from mutant phenotype /// 0030155 // regulation of cell adhesion // traceable author statement /// 0032956 // regulation of actin cytoskeleton organization // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0045616 // regulation of keratinocyte differentiation // inferred from mutant phenotype /// 0051298 // centrosome duplication // inferred from mutant phenotype /// 0051492 // regulation of stress fiber assembly // traceable author statement /// 0051893 // regulation of focal adhesion assembly // traceable author statement /// 2000114 // regulation of establishment of cell polarity // traceable author statement /// 2000145 // regulation of cell motility // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031616 // spindle pole centrosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005198 // structural molecule activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:11319890-11484711 (-) // 92.39 // p25.1"]
["11739144_a_at",0.22343063,0.16497898,0.19968128,-0.29650307,-0.24319363,-0.16497898,0.0014867174,0.000499228,1.348095,0.4309222,1.348095,"up","SKP2",6502,"0000080 // G1 phase of mitotic cell cycle // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000086 // G2/M transition of mitotic cell cycle // inferred from electronic annotation /// 0000209 // protein polyubiquitination // inferred from electronic annotation /// 0000278 // mitotic cell cycle // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008634 // negative regulation of survival gene product expression // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0033148 // positive regulation of intracellular estrogen receptor signaling pathway // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation","0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0019005 // SCF ubiquitin ligase complex // inferred from direct assay /// 0019005 // SCF ubiquitin ligase complex // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation","chr5:36152090-36182467 (+) // 98.94 // p13.2"]
["11746760_a_at",0.26798344,0.30652046,0.20407295,-0.43787193,-0.40450191,-0.20407295,0.0026156236,0.0015218379,1.5245054,0.6083412,1.5245054,"up","ERGIC1",57222,"0006810 // transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from direct assay /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr5:172332242-172345134 (+) // 28.11 // q35.1"]
["11732159_a_at",0.30657673,0.22611618,0.15414429,-0.15414429,-0.21775913,-0.20750809,0.0019427151,0.0009404013,1.3398606,0.4220829,1.3398606,"up","YIF1A",10897,"0006810 // transport // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","","chr11:66052050-66056626 (-) // 77.52 // q13.2"]
["11727402_at",0.26440907,0.21083832,0.2217102,-0.21083832,-0.243783,-0.26054668,0.0006160735,2.7811728e-5,1.3857899,0.47070852,1.3857899,"up","ERGIC2",51290,"0006810 // transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from direct assay /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation","","chr12:29490287-29534081 (-) // 85.62 // p11.22"]
["11738053_x_at",-0.23543167,-0.29757404,-0.33367157,0.23543167,0.34259987,0.26687527,0.0010741793,0.00018365598,-1.485067,-0.57052803,1.485067,"down","PLAUR",5329,"0006501 // C-terminal protein lipidation // traceable author statement /// 0006928 // cellular component movement // non-traceable author statement /// 0006935 // chemotaxis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007596 // blood coagulation // non-traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0016255 // attachment of GPI anchor to protein // traceable author statement /// 0030162 // regulation of proteolysis // non-traceable author statement /// 0042730 // fibrinolysis // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043403 // skeletal muscle tissue regeneration // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0048762 // mesenchymal cell differentiation // inferred from electronic annotation /// 0060742 // epithelial cell differentiation involved in prostate gland development // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0019898 // extrinsic to membrane // traceable author statement /// 0031225 // anchored to membrane // inferred from electronic annotation","0004872 // receptor activity // non-traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0030377 // U-plasminogen activator receptor activity // non-traceable author statement /// 0030377 // U-plasminogen activator receptor activity // inferred from electronic annotation","chr19:44152731-44174699 (-) // 74.81 // q13.31"]
["11744886_a_at",0.22358799,0.1856184,0.23880386,-0.1856184,-0.2462883,-0.24769974,0.00073960464,6.841401e-5,1.3589939,0.44253892,1.3589939,"up","SPAG9",9043,"0000187 // activation of MAPK activity // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // inferred from electronic annotation /// 0007283 // spermatogenesis // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0042147 // retrograde transport, endosome to Golgi // inferred from direct assay /// 0042692 // muscle cell differentiation // traceable author statement /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0051149 // positive regulation of muscle cell differentiation // traceable author statement /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0090074 // negative regulation of protein homodimerization activity // inferred from electronic annotation","0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016021 // integral to membrane // traceable author statement /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0008432 // JUN kinase binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0019894 // kinesin binding // inferred from electronic annotation /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation /// 0048273 // mitogen-activated protein kinase p38 binding // inferred from electronic annotation","chr17:49042435-49124329 (-) // 99.68 // q21.33"]
["11722160_a_at",0.4265957,0.34457588,0.30745125,-0.46063232,-0.48290825,-0.30745125,0.0012233602,0.00028852653,1.7130156,0.77653825,1.7130156,"up","GRB10",2887,"0007165 // signal transduction // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from direct assay /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // inferred from direct assay /// 0032868 // response to insulin stimulus // inferred from sequence or structural similarity /// 0042326 // negative regulation of phosphorylation // inferred from electronic annotation /// 0042327 // positive regulation of phosphorylation // inferred from sequence or structural similarity /// 0045719 // negative regulation of glycogen biosynthetic process // inferred from sequence or structural similarity /// 0046325 // negative regulation of glucose import // inferred from sequence or structural similarity /// 0046325 // negative regulation of glucose import // inferred from electronic annotation /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from electronic annotation /// 0048009 // insulin-like growth factor receptor signaling pathway // inferred from electronic annotation","0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement","0005070 // SH3/SH2 adaptor activity // inferred from electronic annotation /// 0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005158 // insulin receptor binding // inferred from sequence or structural similarity /// 0005158 // insulin receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation","chr7:50657764-50861158 (-) // 97.33 // p12.1"]
["11724105_a_at",-0.27128267,-0.25768995,-0.2538457,0.2538457,0.39695168,0.39834595,0.0011259156,0.00022401937,-1.5269511,-0.6106539,1.5269511,"down","C8orf44-SGK3","100533105 /// 23678","0001558 // regulation of cell growth // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006950 // response to stress // traceable author statement /// 0007154 // cell communication // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030334 // regulation of cell migration // traceable author statement /// 0042127 // regulation of cell proliferation // traceable author statement /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement","0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005246 // calcium channel regulator activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0015459 // potassium channel regulator activity // traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017080 // sodium channel regulator activity // traceable author statement /// 0017081 // chloride channel regulator activity // traceable author statement /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr8:67624652-67774257 (+) // 83.03 // q13.1"]
["11738423_a_at",0.3217721,0.24191427,0.2038064,-0.31536102,-0.2038064,-0.38020182,0.0018693322,0.0008653767,1.4698008,0.5556207,1.4698008,"up","HNF4A",3172,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006591 // ornithine metabolic process // inferred from mutant phenotype /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006637 // acyl-CoA metabolic process // inferred from electronic annotation /// 0006805 // xenobiotic metabolic process // inferred from mutant phenotype /// 0007164 // establishment of tissue polarity // inferred from electronic annotation /// 0007548 // sex differentiation // inferred from electronic annotation /// 0007596 // blood coagulation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from sequence or structural similarity /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010470 // regulation of gastrulation // inferred from electronic annotation /// 0019216 // regulation of lipid metabolic process // inferred from direct assay /// 0023019 // signal transduction involved in regulation of gene expression // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0030522 // intracellular receptor mediated signaling pathway // inferred from electronic annotation /// 0031018 // endocrine pancreas development // traceable author statement /// 0032534 // regulation of microvillus assembly // inferred from electronic annotation /// 0033159 // negative regulation of protein import into nucleus, translocation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042524 // negative regulation of tyrosine phosphorylation of Stat5 protein // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from sequence or structural similarity /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0045216 // cell-cell junction organization // inferred from electronic annotation /// 0045722 // positive regulation of gluconeogenesis // inferred from electronic annotation /// 0045723 // positive regulation of fatty acid biosynthetic process // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045930 // negative regulation of mitotic cell cycle // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0050732 // negative regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // inferred from sequence or structural similarity /// 0050796 // regulation of insulin secretion // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation /// 0055088 // lipid homeostasis // inferred from mutant phenotype /// 0055091 // phospholipid homeostasis // inferred from sequence or structural similarity /// 0055091 // phospholipid homeostasis // inferred from electronic annotation /// 0060395 // SMAD protein signal transduction // inferred from electronic annotation /// 0060398 // regulation of growth hormone receptor signaling pathway // non-traceable author statement /// 0070328 // triglyceride homeostasis // inferred from sequence or structural similarity /// 0070328 // triglyceride homeostasis // inferred from electronic annotation /// 2000189 // positive regulation of cholesterol homeostasis // inferred from sequence or structural similarity /// 2000189 // positive regulation of cholesterol homeostasis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000062 // fatty-acyl-CoA binding // inferred from electronic annotation /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from sequence or structural similarity /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from direct assay /// 0005504 // fatty acid binding // inferred from direct assay /// 0005504 // fatty acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016290 // palmitoyl-CoA hydrolase activity // inferred from electronic annotation /// 0033613 // activating transcription factor binding // inferred from sequence or structural similarity /// 0033613 // activating transcription factor binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070491 // repressing transcription factor binding // inferred from electronic annotation","chr20:43029923-43053276 (+) // 75.02 // q13.12"]
["11720043_a_at",-0.36314106,-0.13594532,-0.16098118,0.13594532,0.19219685,0.17210674,0.0077620237,0.0063312976,-1.3074648,-0.38677216,1.3074648,"down","LY6G6E","79136 /// 7920","","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016787 // hydrolase activity // inferred from electronic annotation","chr6:31654734-31671221 (-) // 98.59 // p21.33"]
["11727897_a_at",0.27162838,0.22116756,0.19648743,-0.19648743,-0.3237524,-0.4024706,0.0021199163,0.0010983213,1.4512854,0.5373312,1.4512854,"up","NAA38",51691,"0000398 // nuclear mRNA splicing, via spliceosome // non-traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017070 // U6 snRNA binding // non-traceable author statement","chr7:117824085-117833660 (+) // 83.17 // q31.31"]
["11747825_a_at",0.24491072,0.206563,0.21240568,-0.3398447,-0.206563,-0.24695349,0.0012306612,0.0002967754,1.4003106,0.48574686,1.4003106,"up","NPHP3","100532724 /// 27031 /// 84129","0006629 // lipid metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0033539 // fatty acid beta-oxidation using acyl-CoA dehydrogenase // inferred from direct assay /// 0045494 // photoreceptor cell maintenance // inferred from mutant phenotype /// 0048496 // maintenance of organ identity // inferred from mutant phenotype /// 0048496 // maintenance of organ identity // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060271 // cilium morphogenesis // inferred from sequence or structural similarity /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from direct assay /// 2000095 // regulation of Wnt receptor signaling pathway, planar cell polarity pathway // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005777 // peroxisome // inferred from sequence or structural similarity /// 0005777 // peroxisome // inferred from electronic annotation /// 0005871 // kinesin complex // inferred from electronic annotation /// 0005929 // cilium // inferred from direct assay /// 0005929 // cilium // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0072372 // primary cilium // inferred from direct assay","0003777 // microtubule motor activity // inferred from electronic annotation /// 0003995 // acyl-CoA dehydrogenase activity // inferred from electronic annotation /// 0004466 // long-chain-acyl-CoA dehydrogenase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016627 // oxidoreductase activity, acting on the CH-CH group of donors // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017099 // very-long-chain-acyl-CoA dehydrogenase activity // inferred from direct assay /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation /// 0070991 // medium-chain-acyl-CoA dehydrogenase activity // inferred from direct assay","chr3:132294614-132345921 (-) // 89.18 // q22.1"]
["11725920_a_at",0.29887486,0.17526102,0.16121626,-0.16121578,-0.19944143,-0.20611048,0.0019481388,0.00094973866,1.3201543,0.40070662,1.3201543,"up","HEXIM2",124790,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045736 // negative regulation of cyclin-dependent protein kinase activity // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation","0004861 // cyclin-dependent protein kinase inhibitor activity // inferred from direct assay /// 0004861 // cyclin-dependent protein kinase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017069 // snRNA binding // inferred from direct assay /// 0017069 // snRNA binding // inferred from electronic annotation","chr17:43238066-43247399 (+) // 95.09 // q21.31"]
["11721001_at",-0.644907,-0.27111435,-0.24001741,0.24001694,0.29096794,0.24956131,0.009363397,0.007891545,-1.564312,-0.6455283,1.564312,"down","HEXIM1",10614,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0045736 // negative regulation of cyclin-dependent protein kinase activity // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0004861 // cyclin-dependent protein kinase inhibitor activity // inferred from direct assay /// 0004861 // cyclin-dependent protein kinase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017069 // snRNA binding // inferred from direct assay /// 0017069 // snRNA binding // inferred from electronic annotation","chr17:43224683-43229585 (+) // 92.36 // q21.31"]
["11718065_a_at",0.19586372,0.17031002,0.21910858,-0.17031002,-0.33365345,-0.35478592,0.0023623689,0.0013073402,1.3960435,0.4813439,1.3960435,"up","PVRL2",5819,"0001675 // acrosome assembly // inferred from electronic annotation /// 0002860 // positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target // inferred from mutant phenotype /// 0002891 // positive regulation of immunoglobulin mediated immune response // inferred from mutant phenotype /// 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from direct assay /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007286 // spermatid development // inferred from sequence or structural similarity /// 0007286 // spermatid development // inferred from electronic annotation /// 0007289 // spermatid nucleus differentiation // inferred from electronic annotation /// 0009566 // fertilization // inferred from electronic annotation /// 0019064 // viral envelope fusion with host membrane // inferred from direct assay /// 0030382 // sperm mitochondrion organization // inferred from electronic annotation /// 0032990 // cell part morphogenesis // inferred from electronic annotation /// 0033005 // positive regulation of mast cell activation // inferred from mutant phenotype /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0042271 // susceptibility to natural killer cell mediated cytotoxicity // inferred from mutant phenotype /// 0043064 // flagellum organization // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045216 // cell-cell junction organization // traceable author statement /// 0045954 // positive regulation of natural killer cell mediated cytotoxicity // inferred from mutant phenotype /// 0046814 // virion attachment, binding of host cell surface coreceptor // inferred from direct assay /// 0050776 // regulation of immune response // traceable author statement /// 0051654 // establishment of mitochondrion localization // inferred from electronic annotation /// 0051856 // adhesion to symbiont // inferred from direct assay /// 0060370 // susceptibility to T cell mediated cytotoxicity // inferred from direct assay","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005915 // zonula adherens // inferred from sequence or structural similarity /// 0005915 // zonula adherens // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015026 // coreceptor activity // traceable author statement /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0050839 // cell adhesion molecule binding // inferred from physical interaction /// 0050839 // cell adhesion molecule binding // inferred from electronic annotation","chr19:45349392-45392480 (+) // 96.5 // q13.32"]
["11741477_a_at",0.25511312,0.27160597,0.368248,-0.25511312,-0.2700429,-0.40429115,0.0014867174,0.00050369714,1.5242907,0.6081381,1.5242907,"up","NPHP1",4867,"0007165 // signal transduction // non-traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007588 // excretion // traceable author statement /// 0007632 // visual behavior // non-traceable author statement /// 0016337 // cell-cell adhesion // non-traceable author statement /// 0030030 // cell projection organization // inferred from sequence or structural similarity /// 0030030 // cell projection organization // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // non-traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0048515 // spermatid differentiation // inferred from sequence or structural similarity /// 0060041 // retina development in camera-type eye // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0005912 // adherens junction // inferred from electronic annotation /// 0005923 // tight junction // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0030054 // cell junction // inferred from electronic annotation /// 0031514 // motile cilium // inferred from direct assay /// 0032391 // photoreceptor connecting cilium // inferred from sequence or structural similarity /// 0035085 // cilium axoneme // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005198 // structural molecule activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr2:110880926-110962639 (-) // 89.31 // q13"]
["11739492_a_at",0.14399004,0.10504246,0.11697483,-0.30134916,-0.3878131,-0.10504246,0.011605237,0.010185819,1.3074332,0.38673735,1.3074332,"up","MGAT4A",11320,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006491 // N-glycan processing // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0000139 // Golgi membrane // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008454 // alpha-1,3-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity // inferred from electronic annotation /// 0008454 // alpha-1,3-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016758 // transferase activity, transferring hexosyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:99235568-99343031 (-) // 81.98 // q11.2"]
["11736741_a_at",-0.24174738,-0.42136288,-0.20320988,0.3182478,0.20321035,0.22142267,0.0033286067,0.002137361,-1.4503492,-0.5364003,1.4503492,"down","MKI67",4288,"0006259 // DNA metabolic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007126 // meiosis // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0034605 // cellular response to heat // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000793 // condensed chromosome // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction","chr10:129894926-129924468 (-) // 98.78 // q26.2"]
["11746441_a_at",0.3167138,0.2757964,0.37928677,-0.33750677,-0.27579594,-0.3832593,0.0008942897,0.00011058827,1.5758384,0.65611964,1.5758384,"up","TGFBR1",7046,"0000186 // activation of MAPKK activity // inferred from direct assay /// 0001501 // skeletal system development // inferred from sequence or structural similarity /// 0001501 // skeletal system development // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from sequence or structural similarity /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001822 // kidney development // inferred from sequence or structural similarity /// 0001822 // kidney development // inferred from electronic annotation /// 0001824 // blastocyst development // inferred from electronic annotation /// 0001837 // epithelial to mesenchymal transition // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0007165 // signal transduction // inferred from direct assay /// 0007178 // transmembrane receptor protein serine/threonine kinase signaling pathway // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred by curator /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from mutant phenotype /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0007507 // heart development // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from electronic annotation /// 0007566 // embryo implantation // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008354 // germ cell migration // inferred from sequence or structural similarity /// 0008354 // germ cell migration // inferred from electronic annotation /// 0009636 // response to toxin // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from sequence or structural similarity /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0018107 // peptidyl-threonine phosphorylation // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030199 // collagen fibril organization // inferred from sequence or structural similarity /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from direct assay /// 0030324 // lung development // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0031396 // regulation of protein ubiquitination // inferred from direct assay /// 0032331 // negative regulation of chondrocyte differentiation // inferred from sequence or structural similarity /// 0034695 // response to prostaglandin E stimulus // inferred from electronic annotation /// 0040008 // regulation of growth // inferred from electronic annotation /// 0042060 // wound healing // traceable author statement /// 0042981 // regulation of apoptotic process // inferred from direct assay /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043062 // extracellular structure organization // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043393 // regulation of protein binding // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0045602 // negative regulation of endothelial cell differentiation // inferred from electronic annotation /// 0045885 // positive regulation of survival gene product expression // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048538 // thymus development // inferred from sequence or structural similarity /// 0048538 // thymus development // inferred from electronic annotation /// 0048565 // digestive tract development // inferred from electronic annotation /// 0048663 // neuron fate commitment // inferred from sequence or structural similarity /// 0048663 // neuron fate commitment // inferred from electronic annotation /// 0048701 // embryonic cranial skeleton morphogenesis // inferred from sequence or structural similarity /// 0048701 // embryonic cranial skeleton morphogenesis // inferred from electronic annotation /// 0048705 // skeletal system morphogenesis // inferred from sequence or structural similarity /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0048762 // mesenchymal cell differentiation // traceable author statement /// 0048844 // artery morphogenesis // inferred from sequence or structural similarity /// 0048844 // artery morphogenesis // inferred from electronic annotation /// 0048870 // cell motility // inferred from mutant phenotype /// 0051272 // positive regulation of cellular component movement // inferred from mutant phenotype /// 0051491 // positive regulation of filopodium assembly // inferred from electronic annotation /// 0051602 // response to electrical stimulus // inferred from electronic annotation /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from direct assay /// 0060017 // parathyroid gland development // inferred from sequence or structural similarity /// 0060017 // parathyroid gland development // inferred from electronic annotation /// 0060021 // palate development // inferred from sequence or structural similarity /// 0060021 // palate development // inferred from electronic annotation /// 0060037 // pharyngeal system development // inferred from sequence or structural similarity /// 0060037 // pharyngeal system development // inferred from electronic annotation /// 0060389 // pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0060391 // positive regulation of SMAD protein import into nucleus // inferred from direct assay /// 0070723 // response to cholesterol // inferred from direct assay /// 0070723 // response to cholesterol // inferred from electronic annotation /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from direct assay","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from direct assay /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0043235 // receptor complex // inferred from direct assay /// 0044459 // plasma membrane part // inferred from direct assay /// 0070022 // transforming growth factor beta receptor homodimeric complex // inferred by curator","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004675 // transmembrane receptor protein serine/threonine kinase activity // inferred from direct assay /// 0004675 // transmembrane receptor protein serine/threonine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005024 // transforming growth factor beta-activated receptor activity // inferred by curator /// 0005024 // transforming growth factor beta-activated receptor activity // inferred from direct assay /// 0005024 // transforming growth factor beta-activated receptor activity // inferred from mutant phenotype /// 0005024 // transforming growth factor beta-activated receptor activity // inferred from electronic annotation /// 0005025 // transforming growth factor beta receptor activity, type I // inferred from direct assay /// 0005025 // transforming growth factor beta receptor activity, type I // inferred from electronic annotation /// 0005114 // type II transforming growth factor beta receptor binding // inferred from direct assay /// 0005114 // type II transforming growth factor beta receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from electronic annotation /// 0046332 // SMAD binding // inferred from direct assay /// 0046332 // SMAD binding // inferred from physical interaction /// 0046332 // SMAD binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0050431 // transforming growth factor beta binding // inferred from direct assay /// 0050431 // transforming growth factor beta binding // inferred from mutant phenotype /// 0050431 // transforming growth factor beta binding // inferred from physical interaction /// 0050431 // transforming growth factor beta binding // inferred from electronic annotation /// 0070411 // I-SMAD binding // inferred from physical interaction","chr9:101891135-101911623 (+) // 91.14 // q22.33"]
["11750794_x_at",0.244483,0.15170622,0.19502449,-0.29101562,-0.1517067,-0.250453,0.001961328,0.00096714933,1.3454882,0.42812967,1.3454882,"up","TINAGL1",64129,"0006508 // proteolysis // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0016197 // endosomal transport // traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay","0005044 // scavenger receptor activity // inferred from electronic annotation /// 0005201 // extracellular matrix structural constituent // non-traceable author statement /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0030247 // polysaccharide binding // inferred from electronic annotation /// 0043236 // laminin binding // inferred from electronic annotation","chr1:32042115-32053288 (+) // 81.72 // p35.2"]
["11736549_a_at",0.3000555,0.29885292,0.22916126,-0.22916174,-0.3902912,-0.48174,0.0021825964,0.0011495759,1.5616678,0.64308757,1.5616678,"up","RAB7L1",8934,"0006184 // GTP catabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation","chr1:205737114-205744610 (-) // 71.91 // q32.1"]
["11726445_at",0.83298016,0.573452,0.6292,-0.573452,-0.7544708,-0.71114683,0.0009735221,0.00014437553,2.5637114,1.3582339,2.5637114,"up","KCNK3",3777,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // traceable author statement /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007420 // brain development // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0051481 // reduction of cytosolic calcium ion concentration // inferred from electronic annotation /// 0071294 // cellular response to zinc ion // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from electronic annotation /// 0071805 // potassium ion transmembrane transport // traceable author statement /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation /// 0090102 // cochlea development // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005252 // open rectifier potassium channel activity // inferred from electronic annotation /// 0005267 // potassium channel activity // traceable author statement /// 0005267 // potassium channel activity // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr2:26915585-26954064 (+) // 83.34 // p23.3"]
["11736985_a_at",0.5306382,0.38649654,0.21148777,-0.24682045,-0.21148777,-0.3095889,0.004084416,0.0028214485,1.5498979,0.6321732,1.5498979,"up","NUBPL",80224,"0032981 // mitochondrial respiratory chain complex I assembly // inferred from mutant phenotype /// 0070584 // mitochondrion morphogenesis // inferred from mutant phenotype","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from direct assay","chr14:32030590-32330368 (+) // 60.45 // q12"]
["11721988_at",0.18958092,0.12075758,0.14502192,-0.31635284,-0.12075806,-0.26906013,0.0047216183,0.0034059908,1.307832,0.38717717,1.307832,"up","KIAA1407",57577,"","","","chr3:113682983-113775460 (-) // 99.28 // q13.31"]
["11723386_s_at",-0.19638109,-0.23708391,-0.17520809,0.17520809,0.32062244,0.3586998,0.0021850707,0.0011521206,-1.4022411,-0.4877345,1.4022411,"down","PTAR1",375743,"0018342 // protein prenylation // inferred from electronic annotation","","0004659 // prenyltransferase activity // inferred from electronic annotation /// 0008318 // protein prenyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr9:72324437-72374876 (-) // 92.71 // q21.12"]
["11761013_at",-0.33262205,-0.2568388,-0.14134645,0.18626785,0.14134645,0.16215754,0.0032386743,0.0020517183,-1.3257968,-0.40685973,1.3257968,"down","PCNA",5111,"0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000083 // regulation of transcription involved in G1/S phase of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000278 // mitotic cell cycle // traceable author statement /// 0000722 // telomere maintenance via recombination // traceable author statement /// 0000723 // telomere maintenance // traceable author statement /// 0006260 // DNA replication // non-traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement /// 0006275 // regulation of DNA replication // inferred from electronic annotation /// 0006281 // DNA repair // non-traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006284 // base-excision repair // traceable author statement /// 0006287 // base-excision repair, gap-filling // inferred from electronic annotation /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006297 // nucleotide-excision repair, DNA gap filling // traceable author statement /// 0006298 // mismatch repair // inferred from direct assay /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0019985 // translesion synthesis // inferred from direct assay /// 0032077 // positive regulation of deoxyribonuclease activity // inferred from direct assay /// 0032201 // telomere maintenance via semi-conservative replication // traceable author statement /// 0033993 // response to lipid // inferred from electronic annotation /// 0046686 // response to cadmium ion // inferred from electronic annotation /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement","0000307 // cyclin-dependent protein kinase holoenzyme complex // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005652 // nuclear lamina // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005657 // replication fork // inferred from electronic annotation /// 0005663 // DNA replication factor C complex // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0043596 // nuclear replication fork // inferred from direct assay /// 0043626 // PCNA complex // inferred from electronic annotation /// 0070557 // PCNA-p21 complex // inferred from direct assay","0000701 // purine-specific mismatch base pair DNA N-glycosylase activity // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030337 // DNA polymerase processivity factor activity // inferred from electronic annotation /// 0030971 // receptor tyrosine kinase binding // inferred from physical interaction /// 0032139 // dinucleotide insertion or deletion binding // inferred from direct assay /// 0032405 // MutLalpha complex binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction","chr20:5098598-5100604 (-) // 80.58 // p13"]
["11724762_a_at",-0.18376303,-0.20820808,-0.2393341,0.18376303,0.27795362,0.25075245,0.0010000851,0.00015634406,-1.3640767,-0.4479248,1.3640767,"down","DEPTOR",64798,"0006469 // negative regulation of protein kinase activity // inferred from mutant phenotype /// 0032007 // negative regulation of TOR signaling cascade // inferred from mutant phenotype /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from mutant phenotype /// 0045792 // negative regulation of cell size // inferred from mutant phenotype","0005622 // intracellular // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr8:120885894-121063157 (+) // 96.9 // q24.12"]
["11754547_a_at",-0.4018736,-0.2726946,-0.26883984,0.48205948,0.26883984,0.42793608,0.0017967653,0.0007991335,-1.6328752,-0.7074145,1.6328752,"down","ENOX2",10495,"0006810 // transport // inferred from electronic annotation /// 0007624 // ultradian rhythm // inferred from direct assay /// 0016049 // cell growth // non-traceable author statement /// 0022900 // electron transport chain // inferred from electronic annotation /// 0040008 // regulation of growth // inferred from electronic annotation /// 0048511 // rhythmic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0015035 // protein disulfide oxidoreductase activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation","chrX:129757875-130037208 (-) // 98.15 // q26.1"]
["11743609_a_at",0.16200161,0.20109367,0.17636967,-0.17061329,-0.16200161,-0.26887465,0.0014512807,0.00046064018,1.3016288,0.38031816,1.3016288,"up","FAM3C",10447,"0007275 // multicellular organismal development // inferred from electronic annotation","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0005125 // cytokine activity // non-traceable author statement","chr7:120988631-121036512 (-) // 97.53 // q31.31"]
["11729421_x_at",0.4574709,0.16646719,0.25378752,-0.2360034,-0.16646767,-0.24462032,0.006111591,0.004782412,1.4223459,0.50827235,1.4223459,"up","TTC26",79989,"","","","chr7:138818489-138874550 (+) // 99.86 // q34"]
["11757658_a_at",0.1611824,0.16579819,0.120075226,-0.120075226,-0.33735085,-0.43023014,0.01021737,0.00876529,1.3612236,0.44490403,1.3612236,"up","LZIC",84328,"0007417 // central nervous system development // not recorded /// 0010212 // response to ionizing radiation // inferred from electronic annotation","","0008013 // beta-catenin binding // inferred from electronic annotation","chr1:9982172-10002807 (-) // 96.42 // p36.22"]
["11716045_s_at",-0.3341751,-0.45510006,-0.3792162,0.54347897,0.3341751,0.35517597,0.0014295598,0.00044389002,-1.7416328,-0.8004405,1.7416328,"down","FAM168B",130074,"","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","","chr2:131805448-131851033 (-) // 98.73 // q21.1"]
["11728797_a_at",-0.77444935,-0.5540991,-0.5832844,0.77926254,0.6349344,0.5540991,0.0010362655,0.0001717347,-2.4510098,-1.2933762,2.4510098,"down","LSM14A",26065,"0006417 // regulation of translation // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0033962 // cytoplasmic mRNA processing body assembly // inferred from direct assay /// 0033962 // cytoplasmic mRNA processing body assembly // inferred from mutant phenotype","0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0010494 // cytoplasmic stress granule // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","","chr19:34663347-34720420 (+) // 97.01 // q13.11"]
["11718942_at",-0.21973515,-0.29149723,-0.35911846,0.21973515,0.4193325,0.3072033,0.0020028213,0.0010039983,-1.5215487,-0.6055406,1.5215487,"down","LSM14B",149986,"0006417 // regulation of translation // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation","0030529 // ribonucleoprotein complex // inferred from electronic annotation","","chr20:60697516-60710430 (+) // 95.52 // q13.33"]
["11724406_a_at",-0.5861378,-0.30849314,-0.54706955,0.50586224,0.4255724,0.30849314,0.0020058425,0.0010063766,-1.8581617,-0.8938761,1.8581617,"down","CCNE1",898,"0000079 // regulation of cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0000082 // G1/S transition of mitotic cell cycle // non-traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000083 // regulation of transcription involved in G1/S phase of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0001547 // antral ovarian follicle growth // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0006270 // DNA-dependent DNA replication initiation // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0010243 // response to organic nitrogen // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014074 // response to purine-containing compound // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0030521 // androgen receptor signaling pathway // non-traceable author statement /// 0031100 // organ regeneration // inferred from electronic annotation /// 0031670 // cellular response to nutrient // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032570 // response to progesterone stimulus // inferred from electronic annotation /// 0033197 // response to vitamin E // inferred from electronic annotation /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045597 // positive regulation of cell differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement /// 0048545 // response to steroid hormone stimulus // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051412 // response to corticosterone stimulus // inferred from electronic annotation /// 0051597 // response to methylmercury // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation","0000307 // cyclin-dependent protein kinase holoenzyme complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003713 // transcription coactivator activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0016538 // cyclin-dependent protein kinase regulator activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0050681 // androgen receptor binding // non-traceable author statement","chr19:30302900-30315219 (+) // 94.61 // q12"]
["11756395_s_at",0.40396214,0.29753017,0.26569843,-0.26569843,-0.3619833,-0.35993958,0.0011555209,0.00024228012,1.5709138,0.651604,1.5709138,"up","AP1S2",8905,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral reproduction // traceable author statement /// 0016044 // cellular membrane organization // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0050690 // regulation of defense response to virus by virus // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0005765 // lysosomal membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation /// 0030119 // AP-type membrane coat adaptor complex // traceable author statement /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0008565 // protein transporter activity // inferred from electronic annotation","chrX:15844192-15845143 (-) // 95.57 // p22.2"]
["11727873_at",-0.75942373,-0.24330759,-0.27306747,0.31559134,0.24330807,0.34909773,0.014202999,0.012875673,-1.6562632,-0.727932,1.6562632,"down","SLC23A3","151295 /// 79840","0006281 // DNA repair // inferred from electronic annotation /// 0006302 // double-strand break repair // inferred from electronic annotation /// 0006303 // double-strand break repair via nonhomologous end joining // inferred from mutant phenotype /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007417 // central nervous system development // non-traceable author statement /// 0010212 // response to ionizing radiation // inferred from direct assay /// 0030183 // B cell differentiation // inferred from mutant phenotype /// 0030217 // T cell differentiation // inferred from mutant phenotype /// 0051351 // positive regulation of ligase activity // non-traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0070419 // nonhomologous end joining complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0005215 // transporter activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr2:219940029-220025953 (-) // 80.76 // q35"]
["11719605_at",-0.22401524,-0.21017456,-0.15709114,0.15709114,0.26248646,0.2966814,0.0017275709,0.0007335852,-1.3527044,-0.43584666,1.3527044,"down","RRN3",54700,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006352 // transcription initiation, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006360 // transcription from RNA polymerase I promoter // traceable author statement /// 0006361 // transcription initiation from RNA polymerase I promoter // traceable author statement /// 0006361 // transcription initiation from RNA polymerase I promoter // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0007000 // nucleolus organization // inferred from electronic annotation /// 0007028 // cytoplasm organization // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0048872 // homeostasis of number of cells // inferred from electronic annotation /// 2000142 // regulation of transcription initiation, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from electronic annotation","0003743 // translation initiation factor activity // inferred from electronic annotation /// 0070063 // RNA polymerase binding // inferred from electronic annotation","chr16:15153878-15188158 (-) // 98.32 // p13.11"]
["11735012_a_at",0.30742025,0.3646927,0.23362112,-0.2336216,-0.26058483,-0.34798908,0.0013056259,0.0003424316,1.4975904,0.58264315,1.4975904,"up","DYNLL2",140735,"0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007017 // microtubule-based process // inferred from electronic annotation /// 0008039 // synaptic target recognition // inferred from electronic annotation /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005875 // microtubule associated complex // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016459 // myosin complex // inferred from sequence or structural similarity /// 0016459 // myosin complex // inferred from electronic annotation /// 0030286 // dynein complex // inferred from electronic annotation","0003774 // motor activity // inferred from electronic annotation /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation","chr17:56160775-56167639 (+) // 96.06 // q22"]
["11717439_s_at",-0.23496914,-0.1720314,-0.25089264,0.30661583,0.2786646,0.1720314,0.0015777147,0.0005795825,-1.3867762,-0.471735,1.3867762,"down","TOP1P1","7150 /// 7151","0006260 // DNA replication // not recorded /// 0006260 // DNA replication // inferred from electronic annotation /// 0006265 // DNA topological change // not recorded /// 0006265 // DNA topological change // inferred from electronic annotation /// 0006338 // chromatin remodeling // not recorded /// 0007059 // chromosome segregation // not recorded /// 0012501 // programmed cell death // non-traceable author statement /// 0016310 // phosphorylation // non-traceable author statement /// 0040016 // embryonic cleavage // inferred from electronic annotation /// 0042493 // response to drug // inferred from expression pattern /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0000228 // nuclear chromosome // inferred from direct assay /// 0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0031298 // replication fork protection complex // not recorded /// 0043204 // perikaryon // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0003916 // DNA topoisomerase activity // inferred from electronic annotation /// 0003917 // DNA topoisomerase type I activity // inferred from mutant phenotype /// 0003917 // DNA topoisomerase type I activity // inferred from electronic annotation /// 0003918 // DNA topoisomerase (ATP-hydrolyzing) activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation","chr20:39657459-39753124 (+) // 93.96 // q12"]
["11741758_x_at",-0.3761921,-0.5142727,-0.15639114,0.18791723,0.18003559,0.15639114,0.008922414,0.007462243,-1.4376707,-0.52373326,1.4376707,"down","TRPV4",59341,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from direct assay /// 0006816 // calcium ion transport // non-traceable author statement /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from direct assay /// 0006884 // cell volume homeostasis // traceable author statement /// 0006970 // response to osmotic stress // inferred from electronic annotation /// 0006971 // hypotonic response // inferred from electronic annotation /// 0007015 // actin filament organization // inferred from sequence or structural similarity /// 0007015 // actin filament organization // inferred from electronic annotation /// 0007043 // cell-cell junction assembly // inferred from sequence or structural similarity /// 0007043 // cell-cell junction assembly // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from direct assay /// 0007231 // osmosensory signaling pathway // inferred from sequence or structural similarity /// 0007231 // osmosensory signaling pathway // traceable author statement /// 0007231 // osmosensory signaling pathway // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // traceable author statement /// 0010977 // negative regulation of neuron projection development // inferred from sequence or structural similarity /// 0010977 // negative regulation of neuron projection development // inferred from electronic annotation /// 0030103 // vasopressin secretion // inferred from electronic annotation /// 0031117 // positive regulation of microtubule depolymerization // inferred from sequence or structural similarity /// 0031117 // positive regulation of microtubule depolymerization // inferred from electronic annotation /// 0031532 // actin cytoskeleton reorganization // inferred from sequence or structural similarity /// 0031532 // actin cytoskeleton reorganization // inferred from electronic annotation /// 0042538 // hyperosmotic salinity response // inferred from electronic annotation /// 0043622 // cortical microtubule organization // inferred from sequence or structural similarity /// 0043622 // cortical microtubule organization // inferred from electronic annotation /// 0046785 // microtubule polymerization // inferred from sequence or structural similarity /// 0046785 // microtubule polymerization // inferred from electronic annotation /// 0047484 // regulation of response to osmotic stress // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070509 // calcium ion import // inferred from sequence or structural similarity /// 0070509 // calcium ion import // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from direct assay /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation /// 0071476 // cellular hypotonic response // inferred from sequence or structural similarity /// 0071476 // cellular hypotonic response // inferred from electronic annotation","0005881 // cytoplasmic microtubule // inferred from sequence or structural similarity /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005912 // adherens junction // inferred from sequence or structural similarity /// 0005912 // adherens junction // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from sequence or structural similarity /// 0005925 // focal adhesion // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from sequence or structural similarity /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030175 // filopodium // inferred from sequence or structural similarity /// 0030175 // filopodium // inferred from electronic annotation /// 0030426 // growth cone // inferred from sequence or structural similarity /// 0030426 // growth cone // inferred from electronic annotation /// 0030864 // cortical actin cytoskeleton // inferred from sequence or structural similarity /// 0030864 // cortical actin cytoskeleton // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from sequence or structural similarity /// 0032587 // ruffle membrane // inferred from electronic annotation","0003779 // actin binding // inferred from sequence or structural similarity /// 0003779 // actin binding // inferred from electronic annotation /// 0005034 // osmosensor activity // inferred from electronic annotation /// 0005080 // protein kinase C binding // inferred from sequence or structural similarity /// 0005080 // protein kinase C binding // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005261 // cation channel activity // inferred from direct assay /// 0005261 // cation channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from direct assay /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from mutant phenotype /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0008017 // microtubule binding // inferred from sequence or structural similarity /// 0008017 // microtubule binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0042169 // SH2 domain binding // inferred from sequence or structural similarity /// 0042169 // SH2 domain binding // inferred from electronic annotation /// 0043014 // alpha-tubulin binding // inferred from sequence or structural similarity /// 0043014 // alpha-tubulin binding // inferred from electronic annotation /// 0048487 // beta-tubulin binding // inferred from sequence or structural similarity /// 0048487 // beta-tubulin binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from sequence or structural similarity /// 0051015 // actin filament binding // inferred from electronic annotation","chr12:110220893-110271212 (-) // 99.02 // q24.11"]
["11721735_at",0.23531532,0.1853075,0.16666317,-0.16666317,-0.23871231,-0.26017284,0.0012233602,0.0002803407,1.3357142,0.41761142,1.3357142,"up","DHTKD1",55526,"0006096 // glycolysis // inferred from electronic annotation /// 0006099 // tricarboxylic acid cycle // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation","0004591 // oxoglutarate dehydrogenase (succinyl-transferring) activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016624 // oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor // inferred from electronic annotation /// 0030976 // thiamine pyrophosphate binding // inferred from electronic annotation","chr10:12110948-12166110 (+) // 82.79 // p14"]
["11759062_s_at",-0.12713146,-0.39008617,-0.22018051,0.14189243,0.19190216,0.12713146,0.008787523,0.0073418585,-1.3189971,-0.3994414,1.3189971,"down","SIK2",23235,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // inferred from direct assay /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0046626 // regulation of insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0046777 // protein autophosphorylation // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:111473114-111601579 (+) // 96.17 // q23.1"]
["11718631_at",-0.25191307,-0.24331999,-0.19614315,0.33196068,0.23255491,0.19614267,0.0013662435,0.00039282467,-1.3986273,-0.4840115,1.3986273,"down","SERTAD1",29950,"0000079 // regulation of cyclin-dependent protein kinase activity // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr19:40927498-40931932 (-) // 77.95 // q13.2"]
["11759124_at",-0.2853384,-0.17015743,-0.252326,0.17015743,0.25533962,0.19796753,0.001459056,0.00047297773,-1.3601466,-0.44376215,1.3601466,"down","FBXL17",64839,"","","","chr5:107194740-107717111 (-) // 90.93 // q21.3"]
["11720384_at",-0.2877779,-0.30076313,-0.25898552,0.25898552,0.34153843,0.38381386,0.0008497762,9.405361e-5,-1.5269167,-0.61062145,1.5269167,"down","STX6",10228,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006906 // vesicle fusion // inferred from physical interaction /// 0007032 // endosome organization // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0042147 // retrograde transport, endosome to Golgi // inferred from mutant phenotype /// 0048193 // Golgi vesicle transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // traceable author statement /// 0032588 // trans-Golgi network membrane // inferred from sequence or structural similarity /// 0032588 // trans-Golgi network membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005484 // SNAP receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:180941851-180992257 (-) // 97.46 // q25.3"]
["11725095_at",0.26390934,0.30583763,0.44278717,-0.26390934,-0.38451147,-0.32496786,0.0014867174,0.00050090445,1.5822464,0.6619743,1.5822464,"up","TTC33",23548,"","","","chr5:40711699-40756064 (-) // 80.91 // p13.1"]
["11718955_a_at",0.30987167,0.17696142,0.17102051,-0.20842934,-0.27222633,-0.17102003,0.0023239863,0.001282043,1.3533263,0.4365098,1.3533263,"up","FBLIM1",54751,"0007155 // cell adhesion // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from mutant phenotype /// 0033623 // regulation of integrin activation // inferred from mutant phenotype /// 0034329 // cell junction assembly // traceable author statement","0001725 // stress fiber // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0008270 // zinc ion binding // inferred from electronic annotation /// 0031005 // filamin binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:16084913-16113224 (+) // 72.65 // p36.21"]
["11749560_a_at",-0.1949501,-0.21242332,-0.19999409,0.3628378,0.1949501,0.20903778,0.0020774815,0.0010602134,-1.3736975,-0.45806438,1.3736975,"down","CIAO1",9391,"0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0016226 // iron-sulfur cluster assembly // inferred from genetic interaction","0071817 // MMXD complex // inferred from direct assay","","chr2:96932085-96937823 (+) // 92.47 // q11.2"]
["11725887_at",0.3597169,0.30009937,0.24004507,-0.24004555,-0.2572837,-0.46014166,0.0024813574,0.0014084536,1.5359281,0.61911076,1.5359281,"up","FAM167B",84734,"","","","chr1:32712817-32714461 (+) // 95.6 // p35.1"]
["11750969_a_at",0.27849007,0.26169014,0.3134575,-0.35606384,-0.33506966,-0.26169014,0.00069462875,4.9444014e-5,1.517981,0.6021538,1.517981,"up","SQLE",6713,"0006695 // cholesterol biosynthetic process // traceable author statement /// 0006725 // cellular aromatic compound metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // non-traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // non-traceable author statement /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004497 // monooxygenase activity // inferred from electronic annotation /// 0004506 // squalene monooxygenase activity // non-traceable author statement /// 0004506 // squalene monooxygenase activity // traceable author statement /// 0004506 // squalene monooxygenase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation","chr8:126011600-126034435 (+) // 99.94 // q24.13"]
["11758219_x_at",-0.42679882,-0.36092377,-0.36724472,0.36092377,0.53971195,0.4556656,0.0008942897,0.0001145765,-1.7864425,-0.83708954,1.7864425,"down","RRM2",6241,"0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000083 // regulation of transcription involved in G1/S phase of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0006260 // DNA replication // non-traceable author statement /// 0009186 // deoxyribonucleoside diphosphate metabolic process // inferred from electronic annotation /// 0009262 // deoxyribonucleotide metabolic process // inferred from electronic annotation /// 0009263 // deoxyribonucleotide biosynthetic process // inferred from sequence or structural similarity /// 0009263 // deoxyribonucleotide biosynthetic process // inferred from electronic annotation /// 0015949 // nucleobase-containing small molecule interconversion // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051259 // protein oligomerization // inferred from electronic annotation /// 0051290 // protein heterotetramerization // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004748 // ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor // inferred from sequence or structural similarity /// 0004748 // ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor // non-traceable author statement /// 0004748 // ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046914 // transition metal ion binding // inferred from electronic annotation","chr2:10270765-10271538 (+) // 56.38 // p25.1"]
["11716309_a_at",0.36838675,0.2265625,0.22521782,-0.22521782,-0.27927446,-0.2533002,0.0014512807,0.00046172968,1.4399178,0.5259865,1.4399178,"up","CYBRD1",79901,"0006879 // cellular iron ion homeostasis // traceable author statement /// 0010039 // response to iron ion // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031526 // brush border membrane // inferred from electronic annotation","0000293 // ferric-chelate reductase activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016722 // oxidoreductase activity, oxidizing metal ions // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:172378742-172414639 (+) // 89.4 // q31.1"]
["11727873_at",-0.75942373,-0.24330759,-0.27306747,0.31559134,0.24330807,0.34909773,0.014202999,0.012875673,-1.6562632,-0.727932,1.6562632,"down","NHEJ1","151295 /// 79840","0006281 // DNA repair // inferred from electronic annotation /// 0006302 // double-strand break repair // inferred from electronic annotation /// 0006303 // double-strand break repair via nonhomologous end joining // inferred from mutant phenotype /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007417 // central nervous system development // non-traceable author statement /// 0010212 // response to ionizing radiation // inferred from direct assay /// 0030183 // B cell differentiation // inferred from mutant phenotype /// 0030217 // T cell differentiation // inferred from mutant phenotype /// 0051351 // positive regulation of ligase activity // non-traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0070419 // nonhomologous end joining complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0005215 // transporter activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr2:219940029-220025953 (-) // 80.76 // q35"]
["11760519_at",-0.33815575,-0.33086157,-0.2185049,0.27723742,0.5174484,0.21850538,0.004395149,0.0030966685,-1.5514004,-0.63357115,1.5514004,"down","NSD1",64324,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0001702 // gastrulation with mouth forming second // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0010452 // histone H3-K36 methylation // inferred from direct assay /// 0010452 // histone H3-K36 methylation // inferred from sequence or structural similarity /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016571 // histone methylation // inferred from sequence or structural similarity /// 0016571 // histone methylation // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0034770 // histone H4-K20 methylation // inferred from sequence or structural similarity /// 0034968 // histone lysine methylation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003682 // chromatin binding // inferred from sequence or structural similarity /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003712 // transcription cofactor activity // inferred from direct assay /// 0003712 // transcription cofactor activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from sequence or structural similarity /// 0004872 // receptor activity // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016922 // ligand-dependent nuclear receptor binding // inferred from sequence or structural similarity /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0030331 // estrogen receptor binding // inferred from sequence or structural similarity /// 0042054 // histone methyltransferase activity // inferred from electronic annotation /// 0042799 // histone methyltransferase activity (H4-K20 specific) // inferred from sequence or structural similarity /// 0042974 // retinoic acid receptor binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046965 // retinoid X receptor binding // inferred from sequence or structural similarity /// 0046966 // thyroid hormone receptor binding // inferred from sequence or structural similarity /// 0046975 // histone methyltransferase activity (H3-K36 specific) // inferred from direct assay /// 0046975 // histone methyltransferase activity (H3-K36 specific) // inferred from sequence or structural similarity /// 0050681 // androgen receptor binding // inferred from direct assay","chr5:176560798-176563618 (+) // 98.81 // q35.2"]
["11749766_a_at",-0.31944895,-0.23231983,-0.1996336,0.37690735,0.25686932,0.1996336,0.0021534306,0.0011269418,-1.4421996,-0.52827084,1.4421996,"down","KCNH5",27133,"0000160 // two-component signal transduction system (phosphorelay) // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000155 // two-component sensor activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005249 // voltage-gated potassium channel activity // inferred from electronic annotation /// 0005267 // potassium channel activity // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation","chr14:63416535-63568762 (-) // 90.24 // q23.2"]
["11736244_s_at",0.2233429,0.18120003,0.22713947,-0.18120003,-0.32292938,-0.28434944,0.0014407983,0.00045358465,1.3883651,0.4733871,1.3883651,"up","HIST1H2AC",8334,"0006334 // nucleosome assembly // non-traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation","0000786 // nucleosome // non-traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr6:26124396-26138605 (+) // 90.6 // p22.2"]
["11722348_a_at",0.289196,0.46200275,0.37817287,-0.289196,-0.3146515,-0.43990803,0.0014306394,0.00044623017,1.6521856,0.7243757,1.6521856,"up","REPS2",9185,"0006461 // protein complex assembly // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chrX:16964813-17171395 (+) // 91.22 // p22.2"]
["11744304_a_at",0.3152914,0.22853565,0.12606668,-0.16677856,-0.12606621,-0.17777538,0.0038521043,0.0026095435,1.3014964,0.3801713,1.3014964,"up","MFSD3",113655,"0006810 // transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr8:145734450-145736589 (+) // 96.57 // q24.3"]
["11734234_at",0.44208193,0.37513208,0.3753748,-0.75786924,-0.37513208,-0.555542,0.00205222,0.0010429025,1.9458188,0.9603774,1.9458188,"up","HIST1H2AG","8329 /// 8330 /// 8332 /// 8336 /// 85235 /// 8969","0006334 // nucleosome assembly // inferred from electronic annotation /// 0006334 // nucleosome assembly // non-traceable author statement","0000786 // nucleosome // inferred from electronic annotation /// 0000786 // nucleosome // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0019899 // enzyme binding // inferred from physical interaction","chr6:27100816-27103070 (+) // 70.91 // p22.1"]
["11755010_s_at",-0.37151337,-0.4524579,-0.32944155,0.32944202,0.34247255,0.42924738,0.0008566264,9.5550175e-5,-1.6835715,-0.7515249,1.6835715,"down","POC1B-GALNT4","100528030 /// 8693","0005975 // carbohydrate metabolic process // non-traceable author statement /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0016266 // O-glycan processing // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0004653 // polypeptide N-acetylgalactosaminyltransferase activity // inferred from electronic annotation /// 0004653 // polypeptide N-acetylgalactosaminyltransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr12:89913191-89919975 (-) // 88.57 // q21.33"]
["11747328_a_at",0.44300508,0.38958836,0.23922682,-0.23922634,-0.26192856,-0.24866867,0.0015855012,0.00058517425,1.5233153,0.6072146,1.5233153,"up","FHL1",2273,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007517 // muscle organ development // non-traceable author statement /// 0009887 // organ morphogenesis // non-traceable author statement /// 0010972 // negative regulation of G2/M transition of mitotic cell cycle // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 2000134 // negative regulation of G1/S transition of mitotic cell cycle // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:135279182-135293508 (+) // 95.99 // q26.3"]
["11715723_s_at",-0.27144814,-0.18968773,-0.18490124,0.29902554,0.31370163,0.18490124,0.0016183598,0.000624728,-1.3959254,-0.48122185,1.3959254,"down","ITM2B",9445,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0042985 // negative regulation of amyloid precursor protein biosynthetic process // inferred from direct assay","0000139 // Golgi membrane // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030660 // Golgi-associated vesicle membrane // inferred from direct assay /// 0031301 // integral to organelle membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0001540 // beta-amyloid binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation","chr13:48807273-48836451 (+) // 86.85 // q14.2"]
["11736612_x_at",-0.23888731,-0.41252756,-0.2000947,0.24899626,0.3203187,0.2000947,0.0030212766,0.0018762621,-1.4542813,-0.5403064,1.4542813,"down","KIAA1432",57589,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr9:5656582-5776555 (+) // 99.51 // p24.1"]
["11736340_a_at",0.45236874,0.2931013,0.28868103,-0.28868103,-0.32658052,-0.36853647,0.0012808557,0.00032818934,1.593998,0.67264974,1.593998,"up","PCSK1",5122,"0006112 // energy reserve metabolic process // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0008152 // metabolic process // traceable author statement /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0010035 // response to inorganic substance // inferred from electronic annotation /// 0010157 // response to chlorate // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016485 // protein processing // inferred from electronic annotation /// 0016486 // peptide hormone processing // traceable author statement /// 0016486 // peptide hormone processing // inferred from electronic annotation /// 0016540 // protein autoprocessing // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from electronic annotation /// 0031016 // pancreas development // inferred from electronic annotation /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0043043 // peptide biosynthetic process // inferred from sequence or structural similarity /// 0043043 // peptide biosynthetic process // inferred from electronic annotation /// 0043278 // response to morphine // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0048678 // response to axon injury // inferred from electronic annotation /// 0050714 // positive regulation of protein secretion // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // traceable author statement /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from electronic annotation /// 0070542 // response to fatty acid // inferred from electronic annotation /// 0070555 // response to interleukin-1 // inferred from electronic annotation","0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005791 // rough endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // not recorded /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from electronic annotation /// 0030141 // secretory granule // traceable author statement /// 0030141 // secretory granule // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043679 // axon terminus // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0004175 // endopeptidase activity // traceable author statement /// 0004175 // endopeptidase activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // not recorded /// 0004252 // serine-type endopeptidase activity // inferred from sequence or structural similarity /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0043559 // insulin binding // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from electronic annotation","chr5:95726071-95768985 (-) // 96.16 // q15"]
["11720158_a_at",0.20104933,0.14404726,0.15498495,-0.472579,-0.14404774,-0.45611238,0.009885796,0.008391513,1.4382092,0.5242736,1.4382092,"up","WDR19",57728,"0030030 // cell projection organization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0031513 // nonmotile primary cilium // inferred from sequence or structural similarity /// 0031513 // nonmotile primary cilium // inferred from electronic annotation /// 0031514 // motile cilium // inferred from sequence or structural similarity /// 0031514 // motile cilium // inferred from electronic annotation /// 0032391 // photoreceptor connecting cilium // inferred from sequence or structural similarity /// 0032391 // photoreceptor connecting cilium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","","chr4:39184023-39287429 (+) // 99.6 // p14"]
["11750722_a_at",0.19114113,0.15711594,0.12891197,-0.12891197,-0.37292814,-0.2348566,0.0065242443,0.0051553696,1.3237419,0.40462193,1.3237419,"up","GPHN",10243,"0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006777 // Mo-molybdopterin cofactor biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0032324 // molybdopterin cofactor biosynthetic process // traceable author statement /// 0032324 // molybdopterin cofactor biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016740 // transferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:66975230-67647914 (+) // 99.92 // q23.3"]
["11724431_at",-0.17058516,-0.11819649,-0.166708,0.11819649,0.2802248,0.38415146,0.007887532,0.0064676404,-1.3311632,-0.41268748,1.3311632,"down","C3orf52",79669,"","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:111805181-111837056 (+) // 94.24 // q13.2"]
["11723903_at",-0.23864555,-0.17494535,-0.16736841,0.16736889,0.4590702,0.21348238,0.008539583,0.007101608,-1.388596,-0.47362694,1.388596,"down","PLEKHG1",57480,"0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation","chr6:150920998-151164799 (+) // 95.06 // q25.1"]
["11741631_a_at",-0.552166,-0.2647791,-0.19824743,0.27288342,0.32513905,0.19824791,0.0076475614,0.0062298547,-1.5197362,-0.6038209,1.5197362,"down","C3orf58",205428,"","0000139 // Golgi membrane // inferred from direct assay /// 0005576 // extracellular region // inferred from electronic annotation /// 0030126 // COPI vesicle coat // inferred from direct assay /// 0030137 // COPI-coated vesicle // inferred from electronic annotation","","chr3:143691922-143711209 (+) // 96.04 // q24"]
["11746229_a_at",0.19133854,0.28710365,0.2912197,-0.25745773,-0.21556664,-0.19133854,0.0011370784,0.00022788574,1.3928195,0.47800827,1.3928195,"up","RPL31",6160,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // traceable author statement","chr2:101618750-101637620 (+) // 88.23 // q11.2"]
["11721803_a_at",-0.29602432,-0.28150177,-0.14951324,0.22548294,0.21076775,0.14951324,0.0021199163,0.0010986277,-1.3543504,-0.4376011,1.3543504,"down","BUB3",9184,"0000070 // mitotic sister chromatid segregation // inferred from electronic annotation /// 0000075 // cell cycle checkpoint // traceable author statement /// 0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007094 // mitotic cell cycle spindle assembly checkpoint // traceable author statement /// 0007126 // meiosis // inferred from electronic annotation /// 0008608 // attachment of spindle microtubules to kinetochore // inferred from direct assay /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051983 // regulation of chromosome segregation // inferred from electronic annotation /// 0071173 // spindle assembly checkpoint // inferred from direct assay /// 0071173 // spindle assembly checkpoint // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005829 // cytosol // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr10:124913759-124924881 (+) // 97.61 // q26.13"]
["11763516_a_at",0.24296188,0.21563292,0.1523552,-0.1523552,-0.3007064,-0.38975286,0.004112417,0.0028478752,1.3991864,0.48458815,1.3991864,"up","CPT1C",126129,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006635 // fatty acid beta-oxidation // inferred from electronic annotation /// 0009437 // carnitine metabolic process // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004095 // carnitine O-palmitoyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation","chr19:50194368-50216300 (+) // 95.52 // q13.33"]
["11740366_a_at",0.25679493,0.22160435,0.27897358,-0.22160435,-0.32697296,-0.26975632,0.0008942897,0.000111482994,1.4391686,0.52523553,1.4391686,"up","SHMT1",6470,"0006544 // glycine metabolic process // inferred from electronic annotation /// 0006545 // glycine biosynthetic process // inferred from electronic annotation /// 0006563 // L-serine metabolic process // inferred from electronic annotation /// 0006565 // L-serine catabolic process // inferred from direct assay /// 0006730 // one-carbon metabolic process // inferred from electronic annotation /// 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0009113 // purine base biosynthetic process // inferred from direct assay /// 0019264 // glycine biosynthetic process from serine // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0035999 // tetrahydrofolate interconversion // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045329 // carnitine biosynthetic process // traceable author statement /// 0046655 // folic acid metabolic process // inferred from direct assay /// 0046655 // folic acid metabolic process // traceable author statement /// 0051262 // protein tetramerization // inferred from direct assay /// 0051289 // protein homotetramerization // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004372 // glycine hydroxymethyltransferase activity // inferred from direct assay /// 0004372 // glycine hydroxymethyltransferase activity // traceable author statement /// 0004372 // glycine hydroxymethyltransferase activity // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008732 // L-allo-threonine aldolase activity // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from direct assay /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay","chr17:18231194-18266856 (-) // 98.8 // p11.2"]
["11734796_s_at",0.47293377,0.18805265,0.14682198,-0.21157932,-0.14682198,-0.23240042,0.012968428,0.011600098,1.3814692,0.4662034,1.3814692,"up","HIST1H2BC","8339 /// 8343 /// 8344 /// 8346 /// 8347","0006334 // nucleosome assembly // non-traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation","0000786 // nucleosome // non-traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr6:26215416-26216920 (-) // 47.43 // p22.2"]
["11746438_a_at",-0.2531662,-0.4855852,-0.5015421,0.3788042,0.2941885,0.2531662,0.0022647758,0.0012213683,-1.6496395,-0.7221508,1.6496395,"down","SHMT2",6472,"0006544 // glycine metabolic process // inferred from electronic annotation /// 0006545 // glycine biosynthetic process // inferred from electronic annotation /// 0006563 // L-serine metabolic process // inferred from electronic annotation /// 0006564 // L-serine biosynthetic process // inferred from electronic annotation /// 0006730 // one-carbon metabolic process // inferred from direct assay /// 0006730 // one-carbon metabolic process // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0019264 // glycine biosynthetic process from serine // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0035999 // tetrahydrofolate interconversion // inferred from electronic annotation /// 0051289 // protein homotetramerization // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from direct assay /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0042645 // mitochondrial nucleoid // inferred from direct assay /// 0042645 // mitochondrial nucleoid // inferred from electronic annotation","0003682 // chromatin binding // inferred from direct assay /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004372 // glycine hydroxymethyltransferase activity // inferred from direct assay /// 0004372 // glycine hydroxymethyltransferase activity // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008732 // L-allo-threonine aldolase activity // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation","chr12:57623885-57628717 (+) // 94.51 // q13.3"]
["11734796_s_at",0.47293377,0.18805265,0.14682198,-0.21157932,-0.14682198,-0.23240042,0.012968428,0.011600098,1.3814692,0.4662034,1.3814692,"up","HIST1H2BE","8339 /// 8343 /// 8344 /// 8346 /// 8347","0006334 // nucleosome assembly // non-traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation","0000786 // nucleosome // non-traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr6:26215416-26216920 (-) // 47.43 // p22.2"]
["11734796_s_at",0.47293377,0.18805265,0.14682198,-0.21157932,-0.14682198,-0.23240042,0.012968428,0.011600098,1.3814692,0.4662034,1.3814692,"up","HIST1H2BF","8339 /// 8343 /// 8344 /// 8346 /// 8347","0006334 // nucleosome assembly // non-traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation","0000786 // nucleosome // non-traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr6:26215416-26216920 (-) // 47.43 // p22.2"]
["11734796_s_at",0.47293377,0.18805265,0.14682198,-0.21157932,-0.14682198,-0.23240042,0.012968428,0.011600098,1.3814692,0.4662034,1.3814692,"up","HIST1H2BG","8339 /// 8343 /// 8344 /// 8346 /// 8347","0006334 // nucleosome assembly // non-traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation","0000786 // nucleosome // non-traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr6:26215416-26216920 (-) // 47.43 // p22.2"]
["11717746_a_at",0.1690073,0.21212769,0.19081783,-0.23990917,-0.18298721,-0.1690073,0.0008691947,0.00010069482,1.3085346,0.38795215,1.3085346,"up","MARCH6",10299,"0016567 // protein ubiquitination // inferred from mutant phenotype /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // inferred from mutant phenotype /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0031624 // ubiquitin conjugating enzyme binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:10353825-10435787 (+) // 95.16 // p15.2"]
["11723272_at",-0.1818614,-0.1258111,-0.1522255,0.39152956,0.29494238,0.1258111,0.0073021553,0.005901476,-1.3416983,-0.42406034,1.3416983,"down","FEM1C",56929,"0016567 // protein ubiquitination // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","","chr5:114856604-114880616 (-) // 95.83 // q22.3"]
["11720297_at",-0.1297617,-0.16066122,-0.18816996,0.33946228,0.37873936,0.12976217,0.006375258,0.005024428,-1.358661,-0.44218558,1.358661,"down","PLEKHF2",79666,"","0030133 // transport vesicle // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:96145948-96169002 (+) // 96.6 // q22.1"]
["11734234_at",0.44208193,0.37513208,0.3753748,-0.75786924,-0.37513208,-0.555542,0.00205222,0.0010429025,1.9458188,0.9603774,1.9458188,"up","HIST1H2AI","8329 /// 8330 /// 8332 /// 8336 /// 85235 /// 8969","0006334 // nucleosome assembly // inferred from electronic annotation /// 0006334 // nucleosome assembly // non-traceable author statement","0000786 // nucleosome // inferred from electronic annotation /// 0000786 // nucleosome // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0019899 // enzyme binding // inferred from physical interaction","chr6:27100816-27103070 (+) // 70.91 // p22.1"]
["11734234_at",0.44208193,0.37513208,0.3753748,-0.75786924,-0.37513208,-0.555542,0.00205222,0.0010429025,1.9458188,0.9603774,1.9458188,"up","HIST1H2AH","8329 /// 8330 /// 8332 /// 8336 /// 85235 /// 8969","0006334 // nucleosome assembly // inferred from electronic annotation /// 0006334 // nucleosome assembly // non-traceable author statement","0000786 // nucleosome // inferred from electronic annotation /// 0000786 // nucleosome // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0019899 // enzyme binding // inferred from physical interaction","chr6:27100816-27103070 (+) // 70.91 // p22.1"]
["11734234_at",0.44208193,0.37513208,0.3753748,-0.75786924,-0.37513208,-0.555542,0.00205222,0.0010429025,1.9458188,0.9603774,1.9458188,"up","HIST1H2AK","8329 /// 8330 /// 8332 /// 8336 /// 85235 /// 8969","0006334 // nucleosome assembly // inferred from electronic annotation /// 0006334 // nucleosome assembly // non-traceable author statement","0000786 // nucleosome // inferred from electronic annotation /// 0000786 // nucleosome // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0019899 // enzyme binding // inferred from physical interaction","chr6:27100816-27103070 (+) // 70.91 // p22.1"]
["11735021_a_at",0.17483234,0.15608788,0.20655155,-0.24907112,-0.1560874,-0.23221445,0.0011947562,0.00026138508,1.311861,0.3916149,1.311861,"up","ZNF462",58499,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0043392 // negative regulation of DNA binding // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:109625377-109773763 (+) // 96.74 // q31.2"]
["11736908_at",0.18136215,0.20143747,0.19888306,-0.18136215,-0.18744087,-0.2271452,0.0005467525,1.5117174e-5,1.3127058,0.3925436,1.3127058,"up","ZBTB3",79842,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:62518381-62521660 (-) // 69.15 // q12.3"]
["11734234_at",0.44208193,0.37513208,0.3753748,-0.75786924,-0.37513208,-0.555542,0.00205222,0.0010429025,1.9458188,0.9603774,1.9458188,"up","HIST1H2AM","8329 /// 8330 /// 8332 /// 8336 /// 85235 /// 8969","0006334 // nucleosome assembly // inferred from electronic annotation /// 0006334 // nucleosome assembly // non-traceable author statement","0000786 // nucleosome // inferred from electronic annotation /// 0000786 // nucleosome // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0019899 // enzyme binding // inferred from physical interaction","chr6:27100816-27103070 (+) // 70.91 // p22.1"]
["11734234_at",0.44208193,0.37513208,0.3753748,-0.75786924,-0.37513208,-0.555542,0.00205222,0.0010429025,1.9458188,0.9603774,1.9458188,"up","HIST1H2AL","8329 /// 8330 /// 8332 /// 8336 /// 85235 /// 8969","0006334 // nucleosome assembly // inferred from electronic annotation /// 0006334 // nucleosome assembly // non-traceable author statement","0000786 // nucleosome // inferred from electronic annotation /// 0000786 // nucleosome // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0019899 // enzyme binding // inferred from physical interaction","chr6:27100816-27103070 (+) // 70.91 // p22.1"]
["11758563_at",0.4498062,0.4444208,0.3062234,-0.30622292,-0.416533,-0.4025979,0.0010771177,0.00018612259,1.711508,0.7752681,1.711508,"up","METTL21A","100506290 /// 100653153 /// 151194","0032259 // methylation // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr2:208477464-208477880 (-) // 98.81 // q33.3"]
["11725462_at",-0.2843399,-0.45367622,-0.32621765,0.5341368,0.35144806,0.2843399,0.0022204556,0.0011817376,-1.6756485,-0.7447195,1.6756485,"down","MAU2",23383,"0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0034088 // maintenance of mitotic sister chromatid cohesion // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0032116 // SMC loading complex // inferred from direct assay /// 0032116 // SMC loading complex // inferred from mutant phenotype","0005515 // protein binding // inferred from physical interaction /// 0047485 // protein N-terminus binding // inferred from physical interaction","chr19:19431622-19469562 (+) // 94.36 // p13.11"]
["11727375_a_at",0.17053127,0.2876835,0.2655449,-0.20503712,-0.25424385,-0.17053127,0.0014677041,0.00048228173,1.3671681,0.45119062,1.3671681,"up","HMGCR",3156,"0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // traceable author statement /// 0006695 // cholesterol biosynthetic process // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0008299 // isoprenoid biosynthetic process // inferred from electronic annotation /// 0008542 // visual learning // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0015936 // coenzyme A metabolic process // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // inferred from electronic annotation /// 0043407 // negative regulation of MAP kinase activity // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0048643 // positive regulation of skeletal muscle tissue development // inferred from electronic annotation /// 0051262 // protein tetramerization // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004420 // hydroxymethylglutaryl-CoA reductase (NADPH) activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0042282 // hydroxymethylglutaryl-CoA reductase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0050661 // NADP binding // inferred from electronic annotation /// 0050662 // coenzyme binding // inferred from direct assay /// 0050662 // coenzyme binding // inferred from electronic annotation /// 0070402 // NADPH binding // inferred from direct assay","chr5:74632992-74657926 (+) // 98.56 // q13.3"]
["11744146_x_at",-0.1339302,-0.18294144,-0.16920567,0.513484,0.36493397,0.1339302,0.012372165,0.010954854,-1.4136992,-0.49947518,1.4136992,"down","RBM3",5935,"0006396 // RNA processing // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from sequence or structural similarity /// 0006950 // response to stress // inferred from electronic annotation /// 0009409 // response to cold // inferred from electronic annotation /// 0035196 // production of miRNAs involved in gene silencing by miRNA // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from sequence or structural similarity /// 0045727 // positive regulation of translation // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015934 // large ribosomal subunit // inferred from sequence or structural similarity /// 0015934 // large ribosomal subunit // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0043023 // ribosomal large subunit binding // inferred from electronic annotation","chrX:48432742-48436958 (+) // 73.0 // p11.23"]
["11736429_at",0.2327714,0.19270277,0.18646955,-0.18646955,-0.33838367,-0.56220484,0.008209111,0.0067702187,1.480756,0.56633395,1.480756,"up","STYX",6815,"0006470 // protein dephosphorylation // not recorded /// 0007283 // spermatogenesis // not recorded /// 0016311 // dephosphorylation // inferred from electronic annotation","0005737 // cytoplasm // not recorded","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // not recorded /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr14:53196877-53241703 (+) // 92.63 // q22.1"]
["11722715_at",-0.36523533,-0.39843845,-0.2752819,0.6725097,0.6053724,0.27528238,0.0037470036,0.0025222078,-1.8201281,-0.86404,1.8201281,"down","STK35",140901,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr20:2082676-2129201 (+) // 97.4 // p13"]
["11730474_at",0.15543938,0.16383839,0.21541071,-0.20709562,-0.1554389,-0.32242823,0.0026252405,0.0015308249,1.3255126,0.4065504,1.3255126,"up","PDE3B",5140,"0006198 // cAMP catabolic process // inferred from expression pattern /// 0006198 // cAMP catabolic process // inferred from electronic annotation /// 0007162 // negative regulation of cell adhesion // inferred from mutant phenotype /// 0007165 // signal transduction // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0016525 // negative regulation of angiogenesis // inferred from mutant phenotype /// 0031018 // endocrine pancreas development // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from sequence or structural similarity /// 0033629 // negative regulation of cell adhesion mediated by integrin // inferred by curator /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0043951 // negative regulation of cAMP-mediated signaling // inferred by curator /// 0046676 // negative regulation of insulin secretion // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // inferred from electronic annotation /// 0050995 // negative regulation of lipid catabolic process // inferred from mutant phenotype","0005626 // insoluble fraction // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005792 // microsome // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032045 // guanyl-nucleotide exchange factor complex // inferred from direct assay","0003824 // catalytic activity // inferred from electronic annotation /// 0004114 // 3',5'-cyclic-nucleotide phosphodiesterase activity // traceable author statement /// 0004114 // 3',5'-cyclic-nucleotide phosphodiesterase activity // inferred from electronic annotation /// 0004115 // 3',5'-cyclic-AMP phosphodiesterase activity // inferred from electronic annotation /// 0004119 // cGMP-inhibited cyclic-nucleotide phosphodiesterase activity // inferred from electronic annotation /// 0004119 // cGMP-inhibited cyclic-nucleotide phosphodiesterase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008081 // phosphoric diester hydrolase activity // inferred from electronic annotation /// 0008144 // drug binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030552 // cAMP binding // inferred from electronic annotation /// 0043422 // protein kinase B binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051219 // phosphoprotein binding // inferred from electronic annotation","chr11:14665231-14894368 (+) // 90.08 // p15.2"]
["11747560_a_at",-0.39040422,-0.5056901,-0.5765915,0.67260456,0.43590212,0.39040422,0.0016431456,0.0006520507,-1.986918,-0.9905323,1.986918,"down","RPS6KB2",6199,"0006412 // translation // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0045948 // positive regulation of translational initiation // inferred from mutant phenotype /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004711 // ribosomal protein S6 kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation","chr11:67195933-67202815 (+) // 85.87 // q13.2"]
["11743297_a_at",-0.6130514,-0.35313988,-0.38241863,0.35313988,0.43229198,0.47432327,0.0016202792,0.00062975136,-1.8269726,-0.86945504,1.8269726,"down","CNOT6",57472,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003723 // RNA binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0004535 // poly(A)-specific ribonuclease activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:179921403-180005404 (+) // 97.37 // q35.3"]
["11719018_at",0.23597908,0.23421383,0.2280178,-0.2280178,-0.27300072,-0.3807211,0.0012591777,0.00031471305,1.4405804,0.52665013,1.4405804,"up","CBFB",865,"0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement","0005634 // nucleus // inferred from electronic annotation","0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr16:67063049-67134961 (+) // 91.08 // q22.1"]
["11717871_s_at",-0.39853,-0.25133133,-0.39382744,0.27023888,0.25133133,0.26272297,0.0011434965,0.00023310918,-1.5255477,-0.6093273,1.5255477,"down","KANK2",25959,"","","","chr19:11274945-11308224 (-) // 87.01 // p13.2"]
["11756238_s_at",-0.19629669,-0.23651886,-0.3135376,0.22488785,0.19629669,0.23570824,0.0010998568,0.00021028184,-1.3829497,-0.46774864,1.3829497,"down","SLC2A1",6513,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006970 // response to osmotic stress // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0015758 // glucose transport // traceable author statement /// 0015758 // glucose transport // inferred from electronic annotation /// 0019852 // L-ascorbic acid metabolic process // traceable author statement /// 0042149 // cellular response to glucose starvation // inferred from electronic annotation /// 0042908 // xenobiotic transport // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070837 // dehydroascorbic acid transport // inferred from electronic annotation","0001939 // female pronucleus // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005901 // caveola // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0031982 // vesicle // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0005355 // glucose transmembrane transporter activity // traceable author statement /// 0005355 // glucose transmembrane transporter activity // inferred from electronic annotation /// 0019900 // kinase binding // inferred from electronic annotation /// 0022857 // transmembrane transporter activity // inferred from electronic annotation /// 0022891 // substrate-specific transmembrane transporter activity // inferred from electronic annotation /// 0033300 // dehydroascorbic acid transporter activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042910 // xenobiotic transporter activity // inferred from electronic annotation /// 0055056 // D-glucose transmembrane transporter activity // inferred from electronic annotation","chr1:43391826-43392503 (-) // 87.48 // p34.2"]
["11744747_a_at",0.311965,0.30704975,0.34390926,-0.32773685,-0.30704975,-0.4121313,0.0006672249,3.9830764e-5,1.5910149,0.6699473,1.5910149,"up","FGFR1OP2",26127,"0009611 // response to wounding // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","","chr12:27091429-27113802 (+) // 96.45 // p11.23"]
["11716955_s_at",-0.17792606,-0.30126572,-0.34510326,0.25468826,0.17792606,0.19666481,0.0019320704,0.0009239124,-1.3991249,-0.48452473,1.3991249,"down","CTDSP2",10106,"0006470 // protein dephosphorylation // inferred from direct assay /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement","0005625 // soluble fraction // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0008420 // CTD phosphatase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:58213255-58240747 (-) // 94.28 // q14.1"]
["11743451_s_at",0.37852573,0.15443802,0.34361506,-0.23341465,-0.15443802,-0.1965375,0.003911406,0.0026581388,1.4015174,0.48698968,1.4015174,"up","ELOVL6",79071,"0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0019367 // fatty acid elongation, saturated fatty acid // inferred from direct assay /// 0019367 // fatty acid elongation, saturated fatty acid // inferred from electronic annotation /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0030497 // fatty acid elongation // inferred from electronic annotation /// 0034625 // fatty acid elongation, monounsaturated fatty acid // inferred from electronic annotation /// 0035338 // long-chain fatty-acyl-CoA biosynthetic process // traceable author statement /// 0042759 // long-chain fatty acid biosynthetic process // inferred from direct assay /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0009922 // fatty acid elongase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation","chr4:110969546-111120036 (-) // 97.89 // q25"]
["11731076_a_at",0.7010422,0.50171137,0.65155077,-0.50171137,-0.60239315,-0.65526676,0.00084399927,8.7712055e-5,2.3046672,1.2045585,2.3046672,"up","LONRF1",91694,"0006508 // proteolysis // inferred from electronic annotation","","0004176 // ATP-dependent peptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:12579414-12612999 (-) // 90.82 // p23.1"]
["11718279_at",-0.15950489,-0.28744793,-0.2869463,0.21397877,0.2060566,0.15950489,0.0016656929,0.0006707247,-1.3545495,-0.4378131,1.3545495,"down","RPRD1B",58490,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0010564 // regulation of cell cycle process // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0070940 // dephosphorylation of RNA polymerase II C-terminal domain // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0016591 // DNA-directed RNA polymerase II, holoenzyme // inferred from direct assay","0000993 // RNA polymerase II core binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr20:36661863-36720768 (+) // 99.1 // q11.23"]
["11734928_x_at",-0.63797283,-0.40692186,-0.66217375,0.40692234,0.6472864,0.60054207,0.0014996352,0.000517316,-2.1743834,-1.1206064,2.1743834,"down","BPNT1",10380,"0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation /// 0050427 // 3'-phosphoadenosine 5'-phosphosulfate metabolic process // traceable author statement","0005829 // cytosol // traceable author statement","0000287 // magnesium ion binding // inferred from electronic annotation /// 0008441 // 3'(2'),5'-bisphosphate nucleotidase activity // inferred from electronic annotation /// 0008441 // 3'(2'),5'-bisphosphate nucleotidase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:220230823-220263785 (-) // 71.03 // q41"]
["11730420_at",-0.15733767,-0.1603136,-0.16420698,0.39272118,0.15733767,0.2653165,0.00444491,0.0031441175,-1.3494871,-0.4324112,1.3494871,"down","FLVCR1",28982,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0015886 // heme transport // inferred from direct assay /// 0030218 // erythrocyte differentiation // inferred from electronic annotation /// 0035108 // limb morphogenesis // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0046620 // regulation of organ growth // inferred from electronic annotation /// 0048536 // spleen development // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0060323 // head morphogenesis // inferred from electronic annotation /// 0097037 // heme export // inferred from mutant phenotype","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005215 // transporter activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0015232 // heme transporter activity // inferred from direct assay /// 0015232 // heme transporter activity // inferred from mutant phenotype","chr1:213031596-213070274 (+) // 94.67 // q32.3"]
["11742639_a_at",0.45687532,0.31822634,0.24846458,-0.3694625,-0.2952819,-0.24846458,0.0017967653,0.00079616584,1.5643808,0.64559174,1.5643808,"up","RDM1",201299,"0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015030 // Cajal body // inferred from electronic annotation /// 0016605 // PML body // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr17:34249481-34257780 (-) // 100.0 // q12"]
["11758185_s_at",0.27709198,0.22138786,0.2560873,-0.23213863,-0.23779106,-0.22138786,0.00047635857,9.0801705e-6,1.3966414,0.48196158,1.3966414,"up","TWF1",5756,"0030837 // negative regulation of actin filament polymerization // inferred from sequence or structural similarity /// 0042989 // sequestering of actin monomers // inferred from sequence or structural similarity /// 0043538 // regulation of actin phosphorylation // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from sequence or structural similarity /// 0015629 // actin cytoskeleton // inferred from sequence or structural similarity /// 0030016 // myofibril // inferred from sequence or structural similarity /// 0030175 // filopodium // inferred from sequence or structural similarity /// 0032587 // ruffle membrane // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity","0003779 // actin binding // inferred from electronic annotation /// 0003785 // actin monomer binding // inferred from sequence or structural similarity /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0005524 // ATP binding // inferred from direct assay /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from sequence or structural similarity","chr12:44189133-44200178 (-) // 96.32 // q12 /// chr17:27530186-27531563 (-) // 94.73 // q11.2"]
["11724956_a_at",0.288414,0.20172405,0.1710167,-0.23121405,-0.17101622,-0.21206808,0.0013953822,0.0004175339,1.342713,0.42515102,1.342713,"up","C14orf169",79697,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0034720 // histone H3-K4 demethylation // inferred from sequence or structural similarity /// 0045668 // negative regulation of osteoblast differentiation // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070544 // histone H3-K36 demethylation // inferred from sequence or structural similarity /// 0070544 // histone H3-K36 demethylation // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation","0005506 // iron ion binding // inferred from sequence or structural similarity /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from sequence or structural similarity /// 0032453 // histone demethylase activity (H3-K4 specific) // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051864 // histone demethylase activity (H3-K36 specific) // inferred from sequence or structural similarity /// 0051864 // histone demethylase activity (H3-K36 specific) // inferred from electronic annotation","chr14:73957530-73960098 (+) // 97.4 // q24.3"]
["11720646_at",0.23011398,0.43495464,0.3521452,-0.31713486,-0.23011446,-0.27628183,0.0016763486,0.0006851227,1.530053,0.61358166,1.530053,"up","SPTLC2",9517,"0006665 // sphingolipid metabolic process // traceable author statement /// 0006665 // sphingolipid metabolic process // inferred from electronic annotation /// 0006686 // sphingomyelin biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046511 // sphinganine biosynthetic process // inferred from electronic annotation /// 0046512 // sphingosine biosynthetic process // inferred from electronic annotation /// 0046513 // ceramide biosynthetic process // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0017059 // serine C-palmitoyltransferase complex // inferred from direct assay","0003824 // catalytic activity // inferred from electronic annotation /// 0004758 // serine C-palmitoyltransferase activity // inferred from direct assay /// 0004758 // serine C-palmitoyltransferase activity // inferred from electronic annotation /// 0004758 // serine C-palmitoyltransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation","chr14:77972340-78083116 (-) // 87.95 // q24.3"]
["11748505_a_at",0.1369772,0.12770271,0.13877296,-0.47074223,-0.30076408,-0.12770271,0.013221201,0.011854668,1.3511807,0.43422064,1.3511807,"up","NCALD",83988,"0007268 // synaptic transmission // traceable author statement /// 0016192 // vesicle-mediated transport // non-traceable author statement","0005622 // intracellular // inferred from direct assay /// 0005829 // cytosol // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0030130 // clathrin coat of trans-Golgi network vesicle // non-traceable author statement","0003779 // actin binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0015631 // tubulin binding // inferred from direct assay /// 0030276 // clathrin binding // inferred from direct assay","chr8:102700790-103136548 (-) // 93.19 // q22.3"]
["11734026_at",-0.2640648,-0.3562045,-0.4246993,0.2640648,0.88487244,0.40566444,0.012414877,0.011008713,-1.823264,-0.86652344,1.823264,"down","ZNF440",126070,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:11925098-11946425 (+) // 76.8 // p13.2"]
["11735177_at",-0.24162006,-0.16669178,-0.26961756,0.40838623,0.18148327,0.16669178,0.0060407864,0.004711397,-1.3929694,-0.47816357,1.3929694,"down","HAL",3034,"0006547 // histidine metabolic process // inferred from electronic annotation /// 0006548 // histidine catabolic process // traceable author statement /// 0006548 // histidine catabolic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0019556 // histidine catabolic process to glutamate and formamide // inferred from electronic annotation /// 0019557 // histidine catabolic process to glutamate and formate // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004397 // histidine ammonia-lyase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016841 // ammonia-lyase activity // inferred from electronic annotation","chr12:96366885-96390143 (-) // 99.02 // q23.1"]
["11733161_a_at",-0.39720488,-0.3617444,-0.4049616,0.61834717,0.65502644,0.3617444,0.001558285,0.0005599141,-1.9092548,-0.9330096,1.9092548,"down","TNFAIP8",25816,"0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0019987 // negative regulation of anti-apoptosis // inferred from mutant phenotype /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0043027 // cysteine-type endopeptidase inhibitor activity involved in apoptotic process // inferred from mutant phenotype","chr5:118604386-118730293 (+) // 97.56 // q23.1"]
["11756810_a_at",0.44806004,0.22579098,0.16906643,-0.16906643,-0.21296787,-0.19923115,0.0066572223,0.005283919,1.3896558,0.47472763,1.3896558,"up","MFAP2",4237,"0030220 // platelet formation // inferred from electronic annotation","0001527 // microfibril // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation","0001968 // fibronectin binding // inferred from electronic annotation /// 0070051 // fibrinogen binding // inferred from electronic annotation","chr1:17301000-17304812 (-) // 77.39 // p36.13"]
["11754183_s_at",-0.40944147,-0.5674739,-0.40764523,0.6006861,0.54948807,0.4076457,0.0011434965,0.00023441185,-1.9735506,-0.9807935,1.9735506,"down","HMGB3",3149,"0006310 // DNA recombination // inferred from sequence or structural similarity /// 0007275 // multicellular organismal development // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from sequence or structural similarity /// 0008301 // DNA binding, bending // inferred from sequence or structural similarity /// 0008301 // DNA binding, bending // traceable author statement","chrX:150151762-150159246 (+) // 87.43 // q28"]
["11719240_at",0.15209961,0.23706245,0.23706245,-0.16212559,-0.24429321,-0.15209961,0.0016202792,0.00063036644,1.3148646,0.3949143,1.3148646,"up","PANX1",24145,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from direct assay /// 0006816 // calcium ion transport // inferred from mutant phenotype /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0007267 // cell-cell signaling // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0033198 // response to ATP // inferred from electronic annotation /// 0034214 // protein hexamerization // inferred from direct assay /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0050715 // positive regulation of cytokine secretion // inferred from electronic annotation /// 0050717 // positive regulation of interleukin-1 alpha secretion // inferred from electronic annotation /// 0050718 // positive regulation of interleukin-1 beta secretion // inferred from direct assay /// 0050718 // positive regulation of interleukin-1 beta secretion // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from mutant phenotype /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005921 // gap junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0032059 // bleb // inferred from direct assay","0005102 // receptor binding // inferred from physical interaction /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005243 // gap junction channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from mutant phenotype /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0022840 // leak channel activity // inferred from mutant phenotype /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0055077 // gap junction hemi-channel activity // inferred from direct assay","chr11:93862011-93915618 (+) // 99.1 // q21"]
["11745020_a_at",0.30648708,0.21368504,0.18748474,-0.2754326,-0.18748474,-0.20900917,0.0014867174,0.00050635205,1.3754094,0.4598611,1.3754094,"up","TNFRSF12A",51330,"0001525 // angiogenesis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006928 // cellular component movement // traceable author statement /// 0006931 // substrate-dependent cell migration, cell attachment to substrate // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045773 // positive regulation of axon extension // inferred from electronic annotation /// 2001238 // positive regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype","0001726 // ruffle // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr16:3070359-3072381 (+) // 96.01 // p13.3"]
["11749958_a_at",0.13398457,0.17266655,0.1856451,-0.28792,-0.25288296,-0.13398457,0.0024511016,0.0013733347,1.3095107,0.3890279,1.3095107,"up","DSCR3",10311,"0007034 // vacuolar transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0030904 // retromer complex // inferred from electronic annotation","","chr21:38597555-38639827 (-) // 99.83 // q22.13"]
["11751710_a_at",0.23124838,0.23304605,0.17515421,-0.19860935,-0.3906741,-0.17515421,0.0039794478,0.0027249448,1.3831543,0.46796212,1.3831543,"up","SLC48A1",55652,"0006810 // transport // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:48167052-48175139 (+) // 95.06 // q13.11"]
["11729146_a_at",-0.23597622,-0.19745159,-0.17503452,0.17503452,0.34639072,0.25240612,0.0019427151,0.0009391086,-1.376271,-0.46076456,1.376271,"down","HNRNPD",3184,"0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006396 // RNA processing // traceable author statement /// 0006401 // RNA catabolic process // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0043488 // regulation of mRNA stability // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement /// 0048255 // mRNA stabilization // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030530 // heterogeneous nuclear ribonucleoprotein complex // non-traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042162 // telomeric DNA binding // inferred from direct assay","chr4:83274213-83295505 (-) // 93.28 // q21.22"]
["11748913_a_at",0.41518116,0.31244183,0.31455898,-0.31244183,-0.4065323,-0.45508194,0.0010089864,0.0001638346,1.6687248,0.73874605,1.6687248,"up","B4GALT4",8702,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006643 // membrane lipid metabolic process // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0003945 // N-acetyllactosamine synthase activity // inferred from electronic annotation /// 0008378 // galactosyltransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:118935085-118959725 (-) // 99.28 // q13.32"]
["11729128_at",0.2884636,0.32606792,0.30073833,-0.31358528,-0.5876756,-0.2884636,0.0030474162,0.001897745,1.6263804,0.7016648,1.6263804,"up","CPA4",51200,"0006508 // proteolysis // non-traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0016573 // histone acetylation // non-traceable author statement","0005576 // extracellular region // inferred from electronic annotation","0004180 // carboxypeptidase activity // inferred from electronic annotation /// 0004181 // metallocarboxypeptidase activity // non-traceable author statement /// 0004181 // metallocarboxypeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:129932973-129964014 (+) // 85.97 // q32.2"]
["11723629_a_at",-0.24177217,-0.21442413,-0.21226692,0.3133669,0.21226692,0.27174473,0.00084399927,9.268726e-5,-1.4030962,-0.4886139,1.4030962,"down","TAF1",6872,"0000080 // G1 phase of mitotic cell cycle // inferred from genetic interaction /// 0000117 // regulation of transcription involved in G2/M-phase of mitotic cell cycle // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006352 // transcription initiation, DNA-dependent // inferred from sequence or structural similarity /// 0006352 // transcription initiation, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred by curator /// 0007049 // cell cycle // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016573 // histone acetylation // inferred from direct assay /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0018107 // peptidyl-threonine phosphorylation // inferred from direct assay /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // traceable author statement /// 0051123 // RNA polymerase II transcriptional preinitiation complex assembly // inferred from sequence or structural similarity /// 0060261 // positive regulation of transcription initiation from RNA polymerase II promoter // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005669 // transcription factor TFIID complex // inferred from direct assay /// 0005669 // transcription factor TFIID complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0071339 // MLL1 complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0002039 // p53 binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0004402 // histone acetyltransferase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0017025 // TBP-class protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from sequence or structural similarity /// 0044212 // transcription regulatory region DNA binding // inferred from sequence or structural similarity /// 0070577 // histone acetyl-lysine binding // inferred from direct assay","chrX:70586113-70685855 (+) // 87.96 // q13.1"]
["11741012_a_at",0.31637764,0.26650047,0.2238226,-0.2238226,-0.31675053,-0.3622036,0.0012443048,0.00030560244,1.4843444,0.5698258,1.4843444,"up","MSMO1",6307,"0006631 // fatty acid metabolic process // traceable author statement /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // traceable author statement /// 0008202 // steroid metabolic process // traceable author statement /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0000254 // C-4 methylsterol oxidase activity // inferred from electronic annotation /// 0000254 // C-4 methylsterol oxidase activity // traceable author statement /// 0005506 // iron ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation","chr4:166248774-166264224 (+) // 82.61 // q32.3"]
["11743923_at",0.194767,0.18173695,0.12644386,-0.12644386,-0.3278203,-0.42752075,0.008553791,0.007117108,1.3770468,0.46157756,1.3770468,"up","DPH3P1","100132911 /// 10732","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from expression pattern /// 0007283 // spermatogenesis // inferred from sequence or structural similarity /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from expression pattern /// 0042127 // regulation of cell proliferation // inferred from sequence or structural similarity /// 0045595 // regulation of cell differentiation // inferred from expression pattern /// 0045595 // regulation of cell differentiation // inferred from sequence or structural similarity","0001673 // male germ cell nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:61472365-61493115 (-) // 87.59 // q13.33"]
["11732859_a_at",-0.2504344,-0.19522715,-0.20063734,0.19522715,0.26502752,0.2606454,0.00084399927,9.0722184e-5,-1.3714794,-0.45573297,1.3714794,"down","DNHD1",144132,"0007018 // microtubule-based movement // inferred from electronic annotation","0030286 // dynein complex // inferred from electronic annotation","0003777 // microtubule motor activity // inferred from electronic annotation","chr11:6518529-6542096 (+) // 99.37 // p15.4"]
["11718524_a_at",-0.39621353,-0.39708805,-0.4164896,0.40508556,0.39621353,0.3967352,3.76817e-5,3.9160923e-8,-1.744252,-0.8026085,1.744252,"down","NIPA2",81614,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015693 // magnesium ion transport // inferred from electronic annotation","0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr15:23004684-23034427 (-) // 95.02 // q11.2"]
["11734801_a_at",-0.24528933,-0.39659262,-0.35242605,0.3130746,0.29045868,0.2452898,0.0011437805,0.00023545524,-1.5308968,-0.614377,1.5308968,"down","WIPI2",26100,"0000045 // autophagic vacuole assembly // inferred from mutant phenotype /// 0000046 // autophagic vacuole fusion // inferred from mutant phenotype /// 0006914 // autophagy // inferred from electronic annotation","0000421 // autophagic vacuole membrane // not recorded /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005776 // autophagic vacuole // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0034045 // pre-autophagosomal structure membrane // inferred from direct assay /// 0034045 // pre-autophagosomal structure membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0032266 // phosphatidylinositol-3-phosphate binding // inferred from direct assay /// 0080025 // phosphatidylinositol-3,5-bisphosphate binding // inferred from direct assay","chr7:5229818-5273485 (+) // 93.48 // p22.1"]
["11740430_x_at",0.17193747,0.21939373,0.13396072,-0.13396072,-0.26278448,-0.29655838,0.0029773635,0.0018368062,1.3251894,0.4061985,1.3251894,"up","FAM208A",23272,"","","","chr3:56654159-56698359 (-) // 89.86 // p14.3"]
["11725373_a_at",0.33565187,0.20727015,0.1956191,-0.19717455,-0.1956191,-0.2415762,0.0016301863,0.0006398275,1.3732907,0.45763698,1.3732907,"up","TRADD",8717,"0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0033209 // tumor necrosis factor-mediated signaling pathway // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0051798 // positive regulation of hair follicle development // inferred from electronic annotation /// 0097191 // extrinsic apoptotic signaling pathway // inferred from mutant phenotype /// 0097191 // extrinsic apoptotic signaling pathway // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0043235 // receptor complex // inferred from direct assay","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019900 // kinase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0060090 // binding, bridging // inferred from physical interaction /// 0070513 // death domain binding // inferred from physical interaction","chr16:67188087-67194201 (-) // 88.74 // q22.1"]
["11737441_a_at",0.16349936,0.20408964,0.1566968,-0.39125776,-0.22076702,-0.1566968,0.005170038,0.0038252047,1.34817,0.43100244,1.34817,"up","ST7L",54879,"0030308 // negative regulation of cell growth // inferred from sequence or structural similarity /// 0030308 // negative regulation of cell growth // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:113066142-113162040 (-) // 94.6 // p13.2"]
["11749567_a_at",-0.21837902,-0.21629333,-0.18534279,0.22435856,0.25867653,0.18534279,0.00070557836,5.4759355e-5,-1.3467335,-0.42946434,1.3467335,"down","DDX55",57696,"","","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr12:124086660-124103536 (+) // 98.68 // q24.31"]
["11727732_a_at",0.33569813,0.3740754,0.36076498,-0.5530305,-0.54713106,-0.33569765,0.0012713709,0.0003214017,1.7844332,0.8354659,1.7844332,"up","LCN6","158062 /// 414332","0006810 // transport // inferred from electronic annotation /// 0007338 // single fertilization // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","","chr9:139632618-139637411 (-) // 60.86 // q34.3"]
["11759981_x_at",0.15410328,0.2270236,0.19390011,-0.15410376,-0.15787601,-0.27655315,0.0020370672,0.0010299383,1.3084451,0.38785332,1.3084451,"up","TSC1",7248,"0001822 // kidney development // inferred from electronic annotation /// 0001843 // neural tube closure // inferred from electronic annotation /// 0001952 // regulation of cell-matrix adhesion // inferred from mutant phenotype /// 0006407 // rRNA export from nucleus // inferred from mutant phenotype /// 0006417 // regulation of translation // inferred from direct assay /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0007160 // cell-matrix adhesion // inferred from mutant phenotype /// 0007399 // nervous system development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0009790 // embryo development // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from mutant phenotype /// 0021766 // hippocampus development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0030030 // cell projection organization // inferred from electronic annotation /// 0032007 // negative regulation of TOR signaling cascade // inferred from mutant phenotype /// 0032862 // activation of Rho GTPase activity // inferred from direct assay /// 0032868 // response to insulin stimulus // inferred from direct assay /// 0032956 // regulation of actin cytoskeleton organization // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation /// 0043666 // regulation of phosphoprotein phosphatase activity // inferred from mutant phenotype /// 0045792 // negative regulation of cell size // inferred from electronic annotation /// 0045859 // regulation of protein kinase activity // inferred from electronic annotation /// 0050808 // synapse organization // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from direct assay /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0051492 // regulation of stress fiber assembly // inferred from direct assay /// 0051492 // regulation of stress fiber assembly // inferred from electronic annotation /// 0051893 // regulation of focal adhesion assembly // inferred from electronic annotation /// 0051894 // positive regulation of focal adhesion assembly // inferred from direct assay /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation","0005624 // membrane fraction // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005884 // actin filament // inferred from direct assay /// 0005938 // cell cortex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from direct assay /// 0030426 // growth cone // inferred from electronic annotation /// 0033596 // TSC1-TSC2 complex // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0044430 // cytoskeletal part // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0030695 // GTPase regulator activity // inferred from electronic annotation /// 0032794 // GTPase activating protein binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0047485 // protein N-terminus binding // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from physical interaction","chr9:135785315-135819982 (-) // 68.04 // q34.13"]
["11733551_at",-0.4957385,-0.18954945,-0.23345184,0.25689888,0.18954945,0.21924257,0.007022509,0.005640387,-1.4420724,-0.5281436,1.4420724,"down","ZIC5",85416,"0001843 // neural tube closure // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr13:100615218-100624178 (-) // 95.27 // q32.3"]
["11744731_at",0.17238379,0.20504332,0.2739315,-0.30007505,-0.2032628,-0.17238379,0.0018126566,0.0008168295,1.3588253,0.44236007,1.3588253,"up","FLVCR1-AS1",642946,"","","","chr1:213029468-213031451 (-) // 84.48 // q32.3"]
["11751354_a_at",0.5130434,0.4627018,0.42922688,-0.42922688,-0.4976349,-0.4984913,0.00047635857,9.41905e-6,1.9231106,0.94344175,1.9231106,"up","HDHD1",8226,"0009117 // nucleotide metabolic process // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation","","0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:6967558-7066194 (-) // 86.17 // p22.31"]
["11757836_s_at",-0.6539173,-0.5572586,-0.43369913,0.5961151,0.776371,0.43369865,0.0016134917,0.00061426644,-2.2196822,-1.1503532,2.2196822,"down","SEC24A",10802,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // non-traceable author statement /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0048208 // COPII vesicle coating // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030127 // COPII vesicle coat // non-traceable author statement /// 0030127 // COPII vesicle coat // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation","chr5:134062919-134063601 (+) // 97.98 // q31.1"]
["11755211_a_at",0.22716904,0.17493534,0.16779518,-0.16779518,-0.41567945,-0.41516876,0.004807013,0.0034882934,1.4367884,0.52284765,1.4367884,"up","DICER1",23405,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001942 // hair follicle development // inferred from electronic annotation /// 0006396 // RNA processing // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0010070 // zygote asymmetric cell division // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010626 // negative regulation of Schwann cell proliferation // inferred from sequence or structural similarity /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0014040 // positive regulation of Schwann cell differentiation // inferred from sequence or structural similarity /// 0019827 // stem cell maintenance // inferred from electronic annotation /// 0021522 // spinal cord motor neuron differentiation // inferred from electronic annotation /// 0021675 // nerve development // inferred from sequence or structural similarity /// 0021889 // olfactory bulb interneuron differentiation // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030422 // production of siRNA involved in RNA interference // inferred from direct assay /// 0030422 // production of siRNA involved in RNA interference // inferred from electronic annotation /// 0030423 // targeting of mRNA for destruction involved in RNA interference // inferred from mutant phenotype /// 0031047 // gene silencing by RNA // inferred from electronic annotation /// 0031054 // pre-miRNA processing // inferred from direct assay /// 0031054 // pre-miRNA processing // inferred from electronic annotation /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0031643 // positive regulation of myelination // inferred from sequence or structural similarity /// 0032290 // peripheral nervous system myelin formation // inferred from sequence or structural similarity /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0035196 // production of miRNAs involved in gene silencing by miRNA // inferred from sequence or structural similarity /// 0035196 // production of miRNAs involved in gene silencing by miRNA // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0042487 // regulation of odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045069 // regulation of viral genome replication // inferred from electronic annotation /// 0045595 // regulation of cell differentiation // inferred from electronic annotation /// 0045664 // regulation of neuron differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048536 // spleen development // inferred from electronic annotation /// 0048565 // digestive tract development // inferred from electronic annotation /// 0048730 // epidermis morphogenesis // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from electronic annotation /// 0048812 // neuron projection morphogenesis // inferred from sequence or structural similarity /// 0050767 // regulation of neurogenesis // inferred from electronic annotation /// 0051225 // spindle assembly // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from electronic annotation /// 0055013 // cardiac muscle cell development // inferred from electronic annotation /// 0060576 // intestinal epithelial cell development // inferred from electronic annotation /// 0070173 // regulation of enamel mineralization // inferred from electronic annotation /// 0071335 // hair follicle cell proliferation // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016442 // RNA-induced silencing complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0003725 // double-stranded RNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0004525 // ribonuclease III activity // inferred from direct assay /// 0004525 // ribonuclease III activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016891 // endoribonuclease activity, producing 5'-phosphomonoesters // inferred from electronic annotation /// 0035198 // miRNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:95556663-95603165 (-) // 98.12 // q32.13"]
["11757588_a_at",0.41474342,0.6349678,0.49385548,-0.49902344,-0.41474342,-0.6051159,0.001213793,0.00027234544,2.029067,1.0208166,2.029067,"up","ALG5",29880,"0006486 // protein glycosylation // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004576 // oligosaccharyl transferase activity // traceable author statement /// 0004581 // dolichyl-phosphate beta-glucosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr13:37523980-37527163 (-) // 95.54 // q13.3"]
["11727196_a_at",-0.20917273,-0.14985466,-0.26458263,0.22811127,0.22049761,0.14985466,0.0016010772,0.00060102716,-1.3262547,-0.40735787,1.3262547,"down","ZNF202",7753,"0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006629 // lipid metabolic process // traceable author statement /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:123594634-123612381 (-) // 98.66 // q24.1"]
["11733038_x_at",0.13455296,0.19118214,0.14121723,-0.34891033,-0.13455296,-0.21276093,0.005350133,0.003995319,1.3083291,0.38772553,1.3083291,"up","DPH3",285381,"0017183 // peptidyl-diphthamide biosynthetic process from peptidyl-histidine // inferred from sequence or structural similarity /// 0050709 // negative regulation of protein secretion // inferred from direct assay /// 0051099 // positive regulation of binding // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:16298568-16306604 (-) // 87.74 // p25.1"]
["11748695_a_at",0.35404348,0.3056593,0.28059864,-0.30948877,-0.28152466,-0.28059912,0.0005467525,1.3723737e-5,1.5198946,0.6039713,1.5198946,"up","SYNGR1",9145,"0006605 // protein targeting // inferred from electronic annotation /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from sequence or structural similarity /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048172 // regulation of short-term neuronal synaptic plasticity // inferred from sequence or structural similarity /// 0048172 // regulation of short-term neuronal synaptic plasticity // inferred from electronic annotation","0005887 // integral to plasma membrane // traceable author statement /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","","chr22:39745995-39773958 (+) // 94.81 // q13.1"]
["11742924_a_at",-1.1419992,-1.2229347,-1.2168207,1.1634579,1.1419992,1.1633892,6.045441e-5,1.0414197e-7,-5.09895,-2.3502002,5.09895,"down","PRDX1",5052,"0001501 // skeletal system development // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0042744 // hydrogen peroxide catabolic process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation","0004601 // peroxidase activity // inferred from direct assay /// 0004601 // peroxidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008379 // thioredoxin peroxidase activity // inferred from direct assay /// 0016209 // antioxidant activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0051920 // peroxiredoxin activity // inferred from electronic annotation","chr1:45976713-45987609 (-) // 91.21 // p34.1"]
["11727874_a_at",0.25428867,0.17076492,0.18394184,-0.20845413,-0.17076492,-0.30961227,0.0019051586,0.000900889,1.3496721,0.4326089,1.3496721,"up","ZFYVE21",79038,"","0005925 // focal adhesion // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0046872 // metal ion binding // inferred from electronic annotation","chr14:104182091-104200001 (+) // 94.96 // q32.33"]
["11717417_s_at",-0.33986998,-0.4119444,-0.47739697,0.47165394,0.43430042,0.3398695,0.0009194498,0.00012193339,-1.7715495,-0.82501173,1.7715495,"down","RHOU",58480,"0000082 // G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from mutant phenotype /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0016601 // Rac protein signal transduction // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0002102 // podosome // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:228870823-228882416 (+) // 91.44 // q42.13"]
["11754643_a_at",0.27578306,0.27249384,0.293643,-0.42713976,-0.27249336,-0.5796623,0.002422976,0.0013544457,1.6324873,0.7070718,1.6324873,"up","TMEM234",56063,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:32681801-32683349 (-) // 84.79 // p35.1"]
["11716191_at",-0.29690123,-0.31460714,-0.40135622,0.4963522,0.4538126,0.2969017,0.0013662435,0.00039304508,-1.6856563,-0.7533104,1.6856563,"down","C15orf44",81556,"","0005737 // cytoplasm // inferred from direct assay","","chr15:65871094-65903486 (-) // 98.53 // q22.31"]
["11725719_s_at",-0.37294006,-0.42574358,-0.25850868,0.34381485,0.33089352,0.25850868,0.0012237608,0.0002914469,-1.5838875,-0.6634698,1.5838875,"down","CDC42",998,"0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0003334 // keratinocyte development // inferred from electronic annotation /// 0006184 // GTP catabolic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0007030 // Golgi organization // inferred from sequence or structural similarity /// 0007088 // regulation of mitosis // inferred from electronic annotation /// 0007097 // nuclear migration // inferred from electronic annotation /// 0007163 // establishment or maintenance of cell polarity // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030225 // macrophage differentiation // traceable author statement /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0031274 // positive regulation of pseudopodium assembly // inferred from direct assay /// 0031295 // T cell costimulation // traceable author statement /// 0031333 // negative regulation of protein complex assembly // inferred from physical interaction /// 0031424 // keratinization // inferred from electronic annotation /// 0031647 // regulation of protein stability // inferred from electronic annotation /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from electronic annotation /// 0034332 // adherens junction organization // inferred from electronic annotation /// 0034613 // cellular protein localization // inferred from electronic annotation /// 0035088 // establishment or maintenance of apical/basal cell polarity // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0042176 // regulation of protein catabolic process // inferred from electronic annotation /// 0042692 // muscle cell differentiation // traceable author statement /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0043497 // regulation of protein heterodimerization activity // inferred from electronic annotation /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0045859 // regulation of protein kinase activity // inferred from electronic annotation /// 0046330 // positive regulation of JNK cascade // inferred from electronic annotation /// 0046847 // filopodium assembly // inferred from electronic annotation /// 0048664 // neuron fate determination // inferred from electronic annotation /// 0048730 // epidermis morphogenesis // inferred from electronic annotation /// 0051017 // actin filament bundle assembly // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051149 // positive regulation of muscle cell differentiation // traceable author statement /// 0051246 // regulation of protein metabolic process // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051489 // regulation of filopodium assembly // inferred from direct assay /// 0051647 // nucleus localization // inferred from electronic annotation /// 0051683 // establishment of Golgi localization // inferred from sequence or structural similarity /// 0051988 // regulation of attachment of spindle microtubules to kinetochore // inferred from mutant phenotype /// 0060070 // canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0060684 // epithelial-mesenchymal cell signaling // inferred from electronic annotation /// 0060789 // hair follicle placode formation // inferred from electronic annotation /// 0071338 // positive regulation of hair follicle cell proliferation // inferred from electronic annotation /// 0071777 // positive regulation of cell cycle cytokinesis // inferred from mutant phenotype /// 0072384 // organelle transport along microtubule // inferred from sequence or structural similarity /// 0090136 // epithelial cell-cell adhesion // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0000139 // Golgi membrane // inferred from sequence or structural similarity /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030141 // secretory granule // inferred from electronic annotation /// 0030175 // filopodium // inferred from direct assay /// 0030496 // midbody // inferred from direct assay /// 0030496 // midbody // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from direct assay /// 0043025 // neuronal cell body // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation /// 0051233 // spindle midzone // inferred from direct assay /// 0071944 // cell periphery // inferred from electronic annotation /// 0072686 // mitotic spindle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from direct assay /// 0019901 // protein kinase binding // inferred from physical interaction /// 0030742 // GTP-dependent protein binding // inferred from electronic annotation /// 0031435 // mitogen-activated protein kinase kinase kinase binding // inferred from electronic annotation /// 0031996 // thioesterase binding // inferred from physical interaction","chr1:22379119-22417580 (+) // 99.67 // p36.12"]
["11718528_a_at",-0.34321976,-0.23713493,-0.23962784,0.3955469,0.3121891,0.23713493,0.0014996352,0.00051700755,-1.5034579,-0.5882845,1.5034579,"down","TOR3A",64222,"0051085 // chaperone mediated protein folding requiring cofactor // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation","chr1:179051111-179065131 (+) // 89.15 // q25.2"]
["11731677_at",0.5325651,0.38779736,0.580348,-0.3942914,-0.4020095,-0.38779736,0.0008743986,0.000103180544,1.8595277,0.8949362,1.8595277,"up","AKR1C4",1109,"0006699 // bile acid biosynthetic process // traceable author statement /// 0008202 // steroid metabolic process // traceable author statement /// 0008206 // bile acid metabolic process // traceable author statement /// 0008209 // androgen metabolic process // traceable author statement /// 0015721 // bile acid and bile salt transport // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0044597 // daunorubicin metabolic process // inferred from mutant phenotype /// 0044598 // doxorubicin metabolic process // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0071395 // cellular response to jasmonic acid stimulus // inferred from direct assay","0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0001758 // retinal dehydrogenase activity // inferred from direct assay /// 0004033 // aldo-keto reductase (NADP) activity // traceable author statement /// 0009055 // electron carrier activity // traceable author statement /// 0015125 // bile acid transmembrane transporter activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016655 // oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor // inferred from direct assay /// 0047023 // androsterone dehydrogenase activity // inferred from direct assay /// 0047042 // androsterone dehydrogenase (B-specific) activity // inferred from electronic annotation /// 0047743 // chlordecone reductase activity // inferred from electronic annotation","chr10:5238190-5260912 (+) // 88.04 // p15.1"]
["11716161_s_at",0.42352676,0.42352676,0.3630929,-0.46375608,-0.3630929,-0.3764596,0.0006160735,2.7756263e-5,1.7465223,0.804485,1.7465223,"up","LBH",81606,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","","chr2:30454397-30482894 (+) // 96.76 // p23.1"]
["11737387_x_at",0.13787317,0.35147476,0.21581316,-0.21945953,-0.21986341,-0.13787317,0.0045984173,0.0032893931,1.3448566,0.42745242,1.3448566,"up","S100PBP",64766,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0048306 // calcium-dependent protein binding // inferred from physical interaction","chr1:33283175-33302756 (+) // 36.61 // p35.1"]
["11720923_a_at",0.29255486,0.20398808,0.20890713,-0.36366177,-0.20398808,-0.24835968,0.0017967653,0.00080088375,1.421243,0.5071532,1.421243,"up","HCP5",0.20398808,0.20890713,"HCP5",10866,"0006952 // defense response // traceable author statement"]
["11726908_a_at",0.46397495,0.4851942,0.47210312,-0.46397448,-0.60626936,-0.5083618,0.0005607693,1.9320216e-5,1.9999436,0.99995935,1.9999436,"up","ANO2",57101,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0034707 // chloride channel complex // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005229 // intracellular calcium activated chloride channel activity // inferred from direct assay /// 0005254 // chloride channel activity // inferred from electronic annotation","chr12:5671816-6055398 (-) // 97.11 // p13.31"]
["11757609_s_at",0.16640091,0.1942749,0.16931248,-0.16640091,-0.2751932,-0.4281292,0.0049674492,0.003643224,1.3818208,0.46657056,1.3818208,"up","DLG5",9231,"0007165 // signal transduction // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0016337 // cell-cell adhesion // non-traceable author statement /// 0035556 // intracellular signal transduction // non-traceable author statement /// 0042981 // regulation of apoptotic process // inferred from electronic annotation","0005622 // intracellular // non-traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005886 // plasma membrane // non-traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0008013 // beta-catenin binding // inferred from direct assay /// 0008092 // cytoskeletal protein binding // inferred from direct assay /// 0030159 // receptor signaling complex scaffold activity // non-traceable author statement","chr10:79550548-79551114 (-) // 100.0 // q22.3"]
["11756603_a_at",-0.23426342,-0.21844387,-0.32027626,0.30376434,0.21844387,0.32995892,0.0012387263,0.00030258892,-1.4557039,-0.54171693,1.4557039,"down","FAM206A",54942,"0006546 // glycine catabolic process // inferred from electronic annotation","0005960 // glycine cleavage complex // inferred from electronic annotation","","chr9:111696722-111703232 (+) // 80.89 // q31.3"]
["11724105_a_at",-0.27128267,-0.25768995,-0.2538457,0.2538457,0.39695168,0.39834595,0.0011259156,0.00022401937,-1.5269511,-0.6106539,1.5269511,"down","SGK3","100533105 /// 23678","0001558 // regulation of cell growth // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006950 // response to stress // traceable author statement /// 0007154 // cell communication // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030334 // regulation of cell migration // traceable author statement /// 0042127 // regulation of cell proliferation // traceable author statement /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement","0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005246 // calcium channel regulator activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0015459 // potassium channel regulator activity // traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017080 // sodium channel regulator activity // traceable author statement /// 0017081 // chloride channel regulator activity // traceable author statement /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr8:67624652-67774257 (+) // 83.03 // q13.1"]
["11739043_a_at",0.3743372,0.17698097,0.1918912,-0.23152494,-0.2659135,-0.17698097,0.0035328772,0.002318736,1.3875531,0.47254294,1.3875531,"up","LIMK2",3985,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016310 // phosphorylation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0042325 // regulation of phosphorylation // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005801 // cis-Golgi network // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr22:31644296-31676059 (+) // 99.13 // q12.2"]
["11723243_at",-0.3106041,-0.43904114,-0.33257675,0.46432686,0.3691578,0.3106041,0.0011555209,0.0002428485,-1.6726129,-0.7421036,1.6726129,"down","CDK6",1021,"0000080 // G1 phase of mitotic cell cycle // inferred from expression pattern /// 0000080 // G1 phase of mitotic cell cycle // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0001954 // positive regulation of cell-matrix adhesion // inferred from direct assay /// 0003323 // type B pancreatic cell development // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0009615 // response to virus // inferred from expression pattern /// 0010468 // regulation of gene expression // inferred from direct assay /// 0010468 // regulation of gene expression // inferred from mutant phenotype /// 0014002 // astrocyte development // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation /// 0021542 // dentate gyrus development // inferred from sequence or structural similarity /// 0021670 // lateral ventricle development // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042063 // gliogenesis // inferred from mutant phenotype /// 0043697 // cell dedifferentiation // inferred from mutant phenotype /// 0045596 // negative regulation of cell differentiation // traceable author statement /// 0045638 // negative regulation of myeloid cell differentiation // inferred from direct assay /// 0045646 // regulation of erythrocyte differentiation // inferred from mutant phenotype /// 0045668 // negative regulation of osteoblast differentiation // inferred from direct assay /// 0045786 // negative regulation of cell cycle // inferred from direct assay /// 0048146 // positive regulation of fibroblast proliferation // inferred from mutant phenotype /// 0048699 // generation of neurons // inferred from sequence or structural similarity /// 0050680 // negative regulation of epithelial cell proliferation // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation /// 2000145 // regulation of cell motility // inferred from sequence or structural similarity /// 2000773 // negative regulation of cellular senescence // inferred from direct assay","0000307 // cyclin-dependent protein kinase holoenzyme complex // inferred from direct assay /// 0001726 // ruffle // inferred from direct assay /// 0001726 // ruffle // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004693 // cyclin-dependent protein kinase activity // inferred from direct assay /// 0004693 // cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0030332 // cyclin binding // inferred from physical interaction","chr7:92234234-92465908 (-) // 97.26 // q21.2"]
["11740656_a_at",0.5751152,0.65256786,0.5952468,-0.63676405,-0.612689,-0.5751152,0.00031084043,2.0233713e-6,2.3227482,1.2158327,2.3227482,"up","HMGA2",8091,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001837 // epithelial to mesenchymal transition // inferred from mutant phenotype /// 0002062 // chondrocyte differentiation // inferred from direct assay /// 0003131 // mesodermal-endodermal cell signaling // inferred from mutant phenotype /// 0006284 // base-excision repair // inferred from direct assay /// 0006325 // chromatin organization // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007095 // mitotic cell cycle G2/M transition DNA damage checkpoint // inferred from direct assay /// 0007275 // multicellular organismal development // traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0009615 // response to virus // inferred from expression pattern /// 0010564 // regulation of cell cycle process // inferred from direct assay /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0021846 // cell proliferation in forebrain // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0030261 // chromosome condensation // inferred from electronic annotation /// 0030325 // adrenal gland development // inferred from electronic annotation /// 0031052 // chromosome breakage // inferred from direct assay /// 0031507 // heterochromatin assembly // inferred from direct assay /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0035978 // histone H2A-S139 phosphorylation // inferred from direct assay /// 0035986 // senescence-associated heterochromatin focus assembly // inferred from direct assay /// 0035987 // endodermal cell differentiation // inferred from mutant phenotype /// 0035988 // chondrocyte proliferation // inferred from direct assay /// 0040008 // regulation of growth // inferred from electronic annotation /// 0040018 // positive regulation of multicellular organism growth // inferred from electronic annotation /// 0042769 // DNA damage response, detection of DNA damage // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043392 // negative regulation of DNA binding // inferred from direct assay /// 0043922 // negative regulation by host of viral transcription // inferred from direct assay /// 0045444 // fat cell differentiation // inferred from mutant phenotype /// 0045869 // negative regulation of retroviral genome replication // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048333 // mesodermal cell differentiation // inferred from mutant phenotype /// 0048712 // negative regulation of astrocyte differentiation // inferred from electronic annotation /// 0048762 // mesenchymal cell differentiation // inferred from mutant phenotype /// 0048863 // stem cell differentiation // inferred from expression pattern /// 0051301 // cell division // inferred from electronic annotation /// 0060123 // regulation of growth hormone secretion // inferred from electronic annotation /// 0060612 // adipose tissue development // inferred from electronic annotation /// 0060613 // fat pad development // inferred from electronic annotation /// 0071158 // positive regulation of cell cycle arrest // inferred from direct assay /// 0090276 // regulation of peptide hormone secretion // inferred from electronic annotation /// 0090402 // oncogene-induced senescence // inferred from direct assay /// 2000036 // regulation of stem cell maintenance // inferred from mutant phenotype /// 2000036 // regulation of stem cell maintenance // traceable author statement /// 2000648 // positive regulation of stem cell proliferation // inferred from direct assay /// 2000648 // positive regulation of stem cell proliferation // inferred from mutant phenotype /// 2000648 // positive regulation of stem cell proliferation // inferred from electronic annotation /// 2000679 // positive regulation of transcription regulatory region DNA binding // inferred from direct assay /// 2000685 // positive regulation of cellular response to X-ray // inferred from direct assay /// 2000774 // positive regulation of cellular senescence // inferred from mutant phenotype /// 2001022 // positive regulation of response to DNA damage stimulus // inferred from direct assay /// 2001033 // negative regulation of double-strand break repair via nonhomologous end joining // inferred from direct assay /// 2001038 // regulation of cellular response to drug // inferred from direct assay","0000228 // nuclear chromosome // inferred from sequence or structural similarity /// 0000228 // nuclear chromosome // inferred from electronic annotation /// 0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0032993 // protein-DNA complex // inferred from direct assay /// 0035985 // senescence-associated heterochromatin focus // inferred from direct assay /// 0071141 // SMAD protein complex // inferred from direct assay","0000975 // regulatory region DNA binding // inferred from direct assay /// 0000988 // protein binding transcription factor activity // inferred from direct assay /// 0001047 // core promoter binding // inferred from direct assay /// 0001071 // nucleic acid binding transcription factor activity // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003680 // AT DNA binding // inferred from direct assay /// 0003680 // AT DNA binding // inferred from mutant phenotype /// 0003680 // AT DNA binding // inferred from electronic annotation /// 0003680 // AT DNA binding // traceable author statement /// 0003906 // DNA-(apurinic or apyrimidinic site) lyase activity // inferred from direct assay /// 0004677 // DNA-dependent protein kinase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008301 // DNA binding, bending // inferred from direct assay /// 0008301 // DNA binding, bending // inferred from mutant phenotype /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0035497 // cAMP response element binding // inferred from direct assay /// 0035500 // MH2 domain binding // inferred from direct assay /// 0035501 // MH1 domain binding // inferred from direct assay /// 0046332 // SMAD binding // inferred from physical interaction /// 0051575 // 5'-deoxyribose-5-phosphate lyase activity // inferred from direct assay /// 0070742 // C2H2 zinc finger domain binding // inferred from mutant phenotype","chr12:66218239-66360070 (+) // 91.11 // q14.3"]
["11745154_a_at",-0.17876816,-0.21496105,-0.2181673,0.25029945,0.33360767,0.17876816,0.0015928574,0.0005945549,-1.3738177,-0.45819062,1.3738177,"down","NCL",4691,"0001525 // angiogenesis // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005730 // nucleolus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005938 // cell cortex // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0042162 // telomeric DNA binding // inferred from direct assay","chr2:232319618-232329211 (-) // 90.65 // q37.1"]
["11718673_at",0.21456909,0.291646,0.19120121,-0.22410107,-0.27766228,-0.19120121,0.0012361597,0.0003001058,1.378845,0.4634603,1.378845,"up","TMEM245",23731,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","","chr9:111777431-111882230 (-) // 82.14 // q31.3"]
["11744216_at",0.20454407,0.13213253,0.19328594,-0.132133,-0.31109953,-0.27577257,0.0033366885,0.0021503079,1.3345215,0.41632253,1.3345215,"up","C15orf57",90416,"","","","chr15:40845008-40857252 (-) // 95.3 // q15.1"]
["11716962_a_at",-0.1834569,-0.16374588,-0.17748928,0.24175692,0.16374588,0.31016302,0.0016241793,0.0006365216,-1.3318694,-0.41345263,1.3318694,"down","PPM1F",9647,"0006469 // negative regulation of protein kinase activity // inferred from direct assay /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0010634 // positive regulation of epithelial cell migration // inferred from mutant phenotype /// 0010811 // positive regulation of cell-substrate adhesion // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0033137 // negative regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0035690 // cellular response to drug // inferred from direct assay /// 0035970 // peptidyl-threonine dephosphorylation // inferred from direct assay /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0044387 // negative regulation of protein kinase activity by regulation of protein phosphorylation // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045927 // positive regulation of growth // inferred from mutant phenotype /// 0050921 // positive regulation of chemotaxis // inferred from mutant phenotype /// 0051496 // positive regulation of stress fiber assembly // inferred from direct assay /// 0051496 // positive regulation of stress fiber assembly // inferred from mutant phenotype /// 0051894 // positive regulation of focal adhesion assembly // inferred from mutant phenotype /// 0097193 // intrinsic apoptotic signaling pathway // inferred from direct assay","0005829 // cytosol // inferred from direct assay /// 0008287 // protein serine/threonine phosphatase complex // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0003824 // catalytic activity // inferred from electronic annotation /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // inferred from direct assay /// 0004722 // protein serine/threonine phosphatase activity // inferred from mutant phenotype /// 0004722 // protein serine/threonine phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from direct assay /// 0033192 // calmodulin-dependent protein phosphatase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr22:22273805-22307250 (-) // 98.2 // q11.22"]
["11752090_a_at",-0.33749056,-0.2993636,-0.30777216,0.507998,0.5724435,0.2993636,0.0017398865,0.0007406382,-1.7109653,-0.7748105,1.7109653,"down","PPM1D",8493,"0000086 // G2/M transition of mitotic cell cycle // inferred from electronic annotation /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006470 // protein dephosphorylation // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0009314 // response to radiation // traceable author statement /// 0009617 // response to bacterium // inferred from electronic annotation /// 0035970 // peptidyl-threonine dephosphorylation // inferred from direct assay","0005634 // nucleus // traceable author statement /// 0008287 // protein serine/threonine phosphatase complex // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // inferred from direct assay /// 0004722 // protein serine/threonine phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:58677629-58741834 (+) // 95.7 // q23.2"]
["11758134_s_at",0.2530346,0.30989885,0.37572002,-0.41631508,-0.31340456,-0.2530346,0.001395873,0.00041960352,1.558836,0.6404692,1.558836,"up","PPM1H",57460,"0008152 // metabolic process // inferred from electronic annotation","","0003824 // catalytic activity // inferred from electronic annotation /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr12:63037782-63038343 (-) // 95.37 // q14.1"]
["11734226_a_at",0.26172638,0.16753578,0.20223618,-0.21447945,-0.16753578,-0.2436428,0.0012233602,0.00028914431,1.3370488,0.41905212,1.3370488,"up","LIMCH1",22998,"0031032 // actomyosin structure organization // inferred from electronic annotation","","0003779 // actin binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:41614918-41702059 (+) // 97.92 // p13"]
["11756903_a_at",0.773129,0.626348,0.8456445,-0.66215277,-0.9843168,-0.626348,0.001277893,0.00032523135,2.8401747,1.5059797,2.8401747,"up","HHAT",55733,"0007224 // smoothened signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0018345 // protein palmitoylation // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0016409 // palmitoyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation","chr1:210502643-210849631 (+) // 87.07 // q32.2"]
["11737880_a_at",0.2576599,0.20954227,0.18192005,-0.34398365,-0.38402176,-0.18192005,0.0024523602,0.0013764072,1.4336398,0.5196826,1.4336398,"up","GALNT2",2590,"0002378 // immunoglobulin biosynthetic process // inferred from direct assay /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0016266 // O-glycan processing // traceable author statement /// 0018242 // protein O-linked glycosylation via serine // inferred from direct assay /// 0018243 // protein O-linked glycosylation via threonine // inferred from direct assay /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005795 // Golgi stack // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030173 // integral to Golgi membrane // non-traceable author statement /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0004653 // polypeptide N-acetylgalactosaminyltransferase activity // inferred from direct assay /// 0004653 // polypeptide N-acetylgalactosaminyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from direct assay /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr1:230202955-230417870 (+) // 98.16 // q42.13"]
["11728218_a_at",-0.19862556,-0.26617336,-0.25531006,0.73206043,0.61149025,0.19862556,0.011204943,0.009805531,-1.6865734,-0.7540951,1.6865734,"down","BCLAF1",9774,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043620 // regulation of DNA-dependent transcription in response to stress // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // traceable author statement /// 2000144 // positive regulation of transcription initiation, DNA-dependent // inferred from mutant phenotype /// 2001022 // positive regulation of response to DNA damage stimulus // inferred from mutant phenotype /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:136578002-136610989 (-) // 98.9 // q23.3"]
["11731268_a_at",-0.33274746,-0.46324587,-0.5118089,0.39346123,0.37898064,0.3327484,0.0009735221,0.00014151672,-1.7463356,-0.8043308,1.7463356,"down","NUP98",4928,"0000059 // protein import into nucleus, docking // non-traceable author statement /// 0000059 // protein import into nucleus, docking // traceable author statement /// 0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006260 // DNA replication // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // traceable author statement /// 0006999 // nuclear pore organization // non-traceable author statement /// 0008645 // hexose transport // traceable author statement /// 0010827 // regulation of glucose transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0000776 // kinetochore // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // traceable author statement /// 0005643 // nuclear pore // inferred from direct assay /// 0005643 // nuclear pore // non-traceable author statement /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031080 // nuclear pore outer ring // inferred from direct assay /// 0031080 // nuclear pore outer ring // non-traceable author statement /// 0031965 // nuclear membrane // inferred from electronic annotation","0005215 // transporter activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0017056 // structural constituent of nuclear pore // non-traceable author statement","chr11:3732785-3818892 (-) // 97.49 // p15.4"]
["11722409_at",0.27818394,0.19947052,0.27558613,-0.31621933,-0.22879791,-0.19947052,0.0012808557,0.00033029073,1.4134715,0.49924278,1.4134715,"up","GALNT7",51809,"0005975 // carbohydrate metabolic process // traceable author statement /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006493 // protein O-linked glycosylation // traceable author statement /// 0006493 // protein O-linked glycosylation // inferred from electronic annotation /// 0016266 // O-glycan processing // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004653 // polypeptide N-acetylgalactosaminyltransferase activity // inferred from electronic annotation /// 0004653 // polypeptide N-acetylgalactosaminyltransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr4:174089912-174245118 (+) // 97.45 // q34.1"]
["11720068_a_at",0.25904608,0.2513461,0.32506514,-0.2513461,-0.27921104,-0.39499092,0.0012306612,0.00029680028,1.5021218,0.5870018,1.5021218,"up","APH1B",83464,"0006915 // apoptotic process // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007220 // Notch receptor processing // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0016485 // protein processing // inferred from direct assay /// 0016485 // protein processing // inferred from electronic annotation /// 0031293 // membrane protein intracellular domain proteolysis // traceable author statement /// 0043085 // positive regulation of catalytic activity // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from direct assay","chr15:63569717-63601318 (+) // 91.93 // q22.2"]
["11755010_s_at",-0.37151337,-0.4524579,-0.32944155,0.32944202,0.34247255,0.42924738,0.0008566264,9.5550175e-5,-1.6835715,-0.7515249,1.6835715,"down","GALNT4","100528030 /// 8693","0005975 // carbohydrate metabolic process // non-traceable author statement /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0016266 // O-glycan processing // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0004653 // polypeptide N-acetylgalactosaminyltransferase activity // inferred from electronic annotation /// 0004653 // polypeptide N-acetylgalactosaminyltransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr12:89913191-89919975 (-) // 88.57 // q21.33"]
["11716906_a_at",0.2811842,0.23560476,0.23329067,-0.23329067,-0.23329067,-0.39762735,0.0017019173,0.0006999703,1.452055,0.53809613,1.452055,"up","CDH1",999,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0001829 // trophectodermal cell differentiation // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // non-traceable author statement /// 0007416 // synapse assembly // inferred from electronic annotation /// 0009636 // response to toxin // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from direct assay /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0019538 // protein metabolic process // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0022408 // negative regulation of cell-cell adhesion // inferred from mutant phenotype /// 0031175 // neuron projection development // inferred from electronic annotation /// 0032880 // regulation of protein localization // inferred from electronic annotation /// 0033561 // regulation of water loss via skin // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0042993 // positive regulation of transcription factor import into nucleus // inferred from direct assay /// 0043281 // regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0045216 // cell-cell junction organization // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0050776 // regulation of immune response // traceable author statement /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0060662 // salivary gland cavitation // inferred from electronic annotation /// 0060693 // regulation of branching involved in salivary gland morphogenesis // inferred from electronic annotation /// 0070830 // tight junction assembly // inferred from electronic annotation /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation /// 0071285 // cellular response to lithium ion // inferred from direct assay /// 0071681 // cellular response to indole-3-methanol // inferred from direct assay /// 0072659 // protein localization in plasma membrane // inferred from direct assay /// 2000008 // regulation of protein localization at cell surface // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from mutant phenotype /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from direct assay /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0009898 // internal side of plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016235 // aggresome // inferred from direct assay /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016328 // lateral plasma membrane // inferred from direct assay /// 0016342 // catenin complex // inferred from direct assay /// 0030054 // cell junction // inferred from direct assay /// 0030054 // cell junction // traceable author statement /// 0030054 // cell junction // inferred from electronic annotation /// 0033268 // node of Ranvier // inferred from electronic annotation /// 0043219 // lateral loop // inferred from electronic annotation /// 0043220 // Schmidt-Lanterman incisure // inferred from electronic annotation /// 0043296 // apical junction complex // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from direct assay /// 0008013 // beta-catenin binding // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0030506 // ankyrin binding // inferred from physical interaction /// 0032794 // GTPase activating protein binding // inferred from physical interaction /// 0042153 // RPTP-like protein binding // inferred from electronic annotation /// 0045295 // gamma-catenin binding // inferred from physical interaction /// 0050839 // cell adhesion molecule binding // non-traceable author statement","chr16:68771127-68869443 (+) // 85.55 // q22.1"]
["11748793_a_at",-0.43861103,-0.40426636,-0.47988415,0.40426636,0.43522453,0.4389906,0.00035482424,3.786669e-6,-1.8239688,-0.867081,1.8239688,"down","ASNS",440,"0001889 // liver development // inferred from electronic annotation /// 0006520 // cellular amino acid metabolic process // inferred from electronic annotation /// 0006529 // asparagine biosynthetic process // inferred by curator /// 0006529 // asparagine biosynthetic process // inferred from direct assay /// 0006529 // asparagine biosynthetic process // inferred from electronic annotation /// 0006541 // glutamine metabolic process // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // traceable author statement /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009416 // response to light stimulus // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009636 // response to toxin // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0031427 // response to methotrexate // inferred from electronic annotation /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0032354 // response to follicle-stimulating hormone stimulus // inferred from electronic annotation /// 0032870 // cellular response to hormone stimulus // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042149 // cellular response to glucose starvation // inferred from direct assay /// 0042149 // cellular response to glucose starvation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043200 // response to amino acid stimulus // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045931 // positive regulation of mitotic cell cycle // inferred from direct assay /// 0070981 // L-asparagine biosynthetic process // inferred from electronic annotation","0005625 // soluble fraction // inferred from direct assay /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004066 // asparagine synthase (glutamine-hydrolyzing) activity // not recorded /// 0004066 // asparagine synthase (glutamine-hydrolyzing) activity // inferred from direct assay /// 0004066 // asparagine synthase (glutamine-hydrolyzing) activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0048037 // cofactor binding // inferred from electronic annotation","chr7:97481515-97501764 (-) // 99.51 // q21.3"]
["11736001_s_at",-0.21947002,-0.29277134,-0.3119912,0.35142326,0.2280035,0.21947002,0.0014353773,0.0004506417,-1.4550241,-0.5410431,1.4550241,"down","DCN",1634,"0001822 // kidney development // inferred from electronic annotation /// 0001890 // placenta development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009887 // organ morphogenesis // traceable author statement /// 0019800 // peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005589 // collagen type VI // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity","0005518 // collagen binding // inferred from electronic annotation /// 0005539 // glycosaminoglycan binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from electronic annotation /// 0050840 // extracellular matrix binding // inferred from electronic annotation","chr12:91539034-91576806 (-) // 97.79 // q21.33"]
["11726614_at",0.1893282,0.21934414,0.2996168,-0.215024,-0.21561146,-0.1893282,0.001091852,0.00020167766,1.3591936,0.44275093,1.3591936,"up","CDH2",1000,"0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007157 // heterophilic cell-cell adhesion // inferred from electronic annotation /// 0007416 // synapse assembly // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0016339 // calcium-dependent cell-cell adhesion // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0031641 // regulation of myelination // inferred from electronic annotation /// 0032880 // regulation of protein localization // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0042692 // muscle cell differentiation // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0050770 // regulation of axonogenesis // inferred from electronic annotation /// 0051149 // positive regulation of muscle cell differentiation // traceable author statement","0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0005912 // adherens junction // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from direct assay /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0005916 // fascia adherens // inferred from electronic annotation /// 0014704 // intercalated disc // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016342 // catenin complex // inferred from direct assay /// 0030027 // lamellipodium // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0044456 // synapse part // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008013 // beta-catenin binding // traceable author statement /// 0008013 // beta-catenin binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from electronic annotation /// 0042153 // RPTP-like protein binding // inferred from electronic annotation /// 0045294 // alpha-catenin binding // inferred from physical interaction /// 0045295 // gamma-catenin binding // inferred from physical interaction","chr18:25530933-25757750 (-) // 95.53 // q12.1"]
["11736202_a_at",0.26139402,0.2339797,0.29549885,-0.23397923,-0.30764246,-0.4077692,0.0013910277,0.0004079629,1.4949402,0.5800878,1.4949402,"up","CDKAL1",54901,"0008033 // tRNA processing // inferred from electronic annotation /// 0009451 // RNA modification // inferred from electronic annotation /// 0043412 // macromolecule modification // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation","chr6:20534685-21232593 (+) // 84.32 // p22.3"]
["11739202_a_at",-0.38149214,-0.47734642,-0.47734642,0.8422923,0.4431615,0.38149214,0.0037018578,0.0024870362,-2.0014472,-1.0010436,2.0014472,"down","ATP5G3",518,"0006810 // transport // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0015986 // ATP synthesis coupled proton transport // inferred from electronic annotation /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005753 // mitochondrial proton-transporting ATP synthase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation /// 0033177 // proton-transporting two-sector ATPase complex, proton-transporting domain // inferred from electronic annotation /// 0045263 // proton-transporting ATP synthase complex, coupling factor F(o) // inferred from electronic annotation","0005215 // transporter activity // non-traceable author statement /// 0008289 // lipid binding // inferred from electronic annotation /// 0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation","chr2:176040986-176046435 (-) // 65.25 // q31.1"]
["11718862_at",-0.34647894,-0.37058735,-0.29323292,0.7998395,0.5741668,0.29323292,0.005185627,0.0038399864,-1.8564067,-0.8925128,1.8564067,"down","SEC63",11231,"0006457 // protein folding // inferred from electronic annotation /// 0006612 // protein targeting to membrane // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // traceable author statement /// 0031072 // heat shock protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr6:108188961-108279504 (-) // 87.17 // q21"]
["11752328_a_at",0.33145618,0.51116943,0.41863394,-0.57883406,-0.53802204,-0.3314557,0.0016147236,0.0006161828,1.8701973,0.90319043,1.8701973,"up","IGF1R",3480,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0006955 // immune response // inferred from mutant phenotype /// 0007165 // signal transduction // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0014065 // phosphatidylinositol 3-kinase cascade // inferred by curator /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030010 // establishment of cell polarity // inferred from electronic annotation /// 0030238 // male sex determination // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0030879 // mammary gland development // inferred from electronic annotation /// 0031017 // exocrine pancreas development // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0032467 // positive regulation of cytokinesis // inferred from electronic annotation /// 0033197 // response to vitamin E // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043409 // negative regulation of MAPK cascade // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from mutant phenotype /// 0045768 // positive regulation of anti-apoptosis // inferred from electronic annotation /// 0046328 // regulation of JNK cascade // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048009 // insulin-like growth factor receptor signaling pathway // inferred from direct assay /// 0048009 // insulin-like growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // inferred from direct assay /// 0051054 // positive regulation of DNA metabolic process // inferred from electronic annotation /// 0051262 // protein tetramerization // inferred from direct assay /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0051389 // inactivation of MAPKK activity // inferred from direct assay /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0051898 // negative regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0060740 // prostate gland epithelium morphogenesis // inferred from electronic annotation /// 0090031 // positive regulation of steroid hormone biosynthetic process // inferred from electronic annotation","0005792 // microsome // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred by curator /// 0005901 // caveola // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005010 // insulin-like growth factor-activated receptor activity // inferred from direct assay /// 0005010 // insulin-like growth factor-activated receptor activity // traceable author statement /// 0005158 // insulin receptor binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005520 // insulin-like growth factor binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0031994 // insulin-like growth factor I binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from physical interaction /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation /// 0043559 // insulin binding // inferred from physical interaction /// 0043560 // insulin receptor substrate binding // inferred from physical interaction /// 0043560 // insulin receptor substrate binding // inferred from electronic annotation","chr15:99192810-99460184 (+) // 99.96 // q26.3"]
["11743373_a_at",0.18057632,0.20589828,0.23231316,-0.18057632,-0.21953678,-0.28859997,0.0011442282,0.00023751851,1.3526922,0.43583363,1.3526922,"up","C15orf23",90417,"0000070 // mitotic sister chromatid segregation // inferred from mutant phenotype /// 0000090 // mitotic anaphase // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0007051 // spindle organization // inferred from mutant phenotype /// 0007059 // chromosome segregation // inferred from mutant phenotype /// 0007067 // mitosis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051988 // regulation of attachment of spindle microtubules to kinetochore // inferred from mutant phenotype","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0000922 // spindle pole // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0035371 // microtubule plus end // inferred from direct assay /// 0072686 // mitotic spindle // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr15:40674921-40686739 (+) // 89.82 // q15.1"]
["11729630_a_at",0.28860283,0.22138786,0.21061802,-0.21061802,-0.35508347,-0.2254219,0.0016202792,0.0006332612,1.4180522,0.50391066,1.4180522,"up","AP3M1",26985,"0006622 // protein targeting to lysosome // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005764 // lysosome // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0030131 // clathrin adaptor complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr10:75880013-75910826 (-) // 92.0 // q22.2"]
["11751128_x_at",-0.19930077,-0.22959518,-0.21178246,0.22332191,0.19930077,0.34617043,0.0015242294,0.00053221104,-1.3849404,-0.46982384,1.3849404,"down","SHISA5",51246,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from mutant phenotype /// 0050699 // WW domain binding // inferred from physical interaction","chr3:48509713-48520968 (-) // 91.12 // p21.31"]
["11718303_a_at",0.30330658,0.16716671,0.14783764,-0.14783764,-0.1836586,-0.2113018,0.0029175605,0.0017729017,1.3077043,0.38703632,1.3077043,"up","PAFAH1B3",5050,"0006629 // lipid metabolic process // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0016042 // lipid catabolic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0003847 // 1-alkyl-2-acetylglycerophosphocholine esterase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation","chr19:42801186-42806929 (-) // 95.72 // q13.2"]
["11725931_at",-0.19496822,-0.20673752,-0.16873789,0.43581486,0.16873741,0.18533611,0.007907775,0.006494456,-1.3693051,-0.453444,1.3693051,"down","HSPA5",3309,"0002576 // platelet degranulation // traceable author statement /// 0006200 // ATP catabolic process // inferred from sequence or structural similarity /// 0006916 // anti-apoptosis // inferred from mutant phenotype /// 0006916 // anti-apoptosis // traceable author statement /// 0006983 // ER overload response // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0021589 // cerebellum structural organization // inferred from electronic annotation /// 0021680 // cerebellar Purkinje cell layer development // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030433 // ER-associated protein catabolic process // traceable author statement /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0031398 // positive regulation of protein ubiquitination // inferred from electronic annotation /// 0042149 // cellular response to glucose starvation // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from electronic annotation /// 0060904 // regulation of protein folding in endoplasmic reticulum // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0008180 // signalosome // inferred from direct assay /// 0008303 // caspase complex // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // inferred from direct assay /// 0030496 // midbody // inferred from direct assay /// 0034663 // endoplasmic reticulum chaperone complex // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from sequence or structural similarity /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0030674 // protein binding, bridging // non-traceable author statement /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0043022 // ribosome binding // inferred from electronic annotation /// 0043027 // cysteine-type endopeptidase inhibitor activity involved in apoptotic process // inferred from direct assay /// 0051082 // unfolded protein binding // traceable author statement /// 0051082 // unfolded protein binding // inferred from electronic annotation /// 0051087 // chaperone binding // traceable author statement /// 0051787 // misfolded protein binding // inferred from direct assay /// 0051787 // misfolded protein binding // inferred from electronic annotation","chr9:127997128-128003771 (-) // 89.6 // q33.3"]
["11747081_a_at",0.51107836,0.27251482,0.4721427,-0.32873487,-0.368968,-0.27251482,0.0017193076,0.00071636395,1.6724749,0.7419845,1.6724749,"up","INPP5A",3632,"0007154 // cell communication // non-traceable author statement /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation","0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0004445 // inositol-polyphosphate 5-phosphatase activity // non-traceable author statement /// 0004445 // inositol-polyphosphate 5-phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042731 // PH domain binding // inferred from physical interaction /// 0052658 // inositol-1,4,5-trisphosphate 5-phosphatase activity // inferred from electronic annotation /// 0052659 // inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity // inferred from electronic annotation","chr10:134351352-134591381 (+) // 81.57 // q26.3"]
["11728022_a_at",0.26962757,0.31335354,0.32794094,-0.29767418,-0.26962757,-0.30870914,0.00047635857,9.246722e-6,1.5111474,0.59564435,1.5111474,"up","TMEM45A",55076,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:100211462-100296290 (+) // 96.61 // q12.2"]
["11724134_a_at",0.20322132,0.2192545,0.1505847,-0.38276005,-0.2703743,-0.15058517,0.0040863724,0.0028245598,1.3745189,0.45892668,1.3745189,"up","SLC12A2",6558,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0015696 // ammonium transport // inferred from direct assay /// 0030321 // transepithelial chloride transport // inferred from direct assay /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0050910 // detection of mechanical stimulus involved in sensory perception of sound // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0060444 // branching involved in mammary gland duct morphogenesis // inferred from electronic annotation /// 0060763 // mammary duct terminal end bud growth // inferred from electronic annotation /// 0070634 // transepithelial ammonium transport // inferred from direct assay","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0008511 // sodium:potassium:chloride symporter activity // traceable author statement /// 0015293 // symporter activity // inferred from electronic annotation /// 0015377 // cation:chloride symporter activity // inferred from electronic annotation /// 0051739 // ammonia transmembrane transporter activity // inferred from direct assay","chr5:127419457-127525374 (+) // 92.82 // q23.3"]
["11755296_a_at",-0.23684597,-0.26255226,-0.3152361,0.23684597,0.25310135,0.31335163,0.0008051186,7.98081e-5,-1.4532784,-0.5393111,1.4532784,"down","PSAP",5660,"0002576 // platelet degranulation // traceable author statement /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006687 // glycosphingolipid metabolic process // traceable author statement /// 0006869 // lipid transport // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0019216 // regulation of lipid metabolic process // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0043085 // positive regulation of catalytic activity // traceable author statement /// 0043408 // regulation of MAPK cascade // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0048589 // developmental growth // inferred from electronic annotation /// 0060736 // prostate gland growth // inferred from electronic annotation /// 0060742 // epithelial cell differentiation involved in prostate gland development // inferred from electronic annotation /// 0071310 // cellular response to organic substance // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from sequence or structural similarity /// 0005615 // extracellular space // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016021 // integral to membrane // traceable author statement /// 0043202 // lysosomal lumen // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0008047 // enzyme activator activity // traceable author statement /// 0008289 // lipid binding // traceable author statement","chr10:73576939-73594263 (-) // 96.12 // q22.1"]
["11746958_s_at",0.54025936,0.31937218,0.20904636,-0.2232809,-0.20904636,-0.2886672,0.005377771,0.0040252223,1.512104,0.59655744,1.512104,"up","ASIC1",41,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // non-traceable author statement /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0009268 // response to pH // traceable author statement /// 0035725 // sodium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005272 // sodium channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015280 // ligand-gated sodium channel activity // non-traceable author statement /// 0015280 // ligand-gated sodium channel activity // inferred from electronic annotation /// 0015280 // ligand-gated sodium channel activity // traceable author statement","chr12:50451535-50477393 (+) // 95.29 // q13.12"]
["11758904_at",0.25209808,0.22771883,0.21697235,-0.21697187,-0.29662323,-0.31868172,0.0008613762,9.7631746e-5,1.423743,0.50968874,1.423743,"up","RCAN3",11123,"0009653 // anatomical structure morphogenesis // traceable author statement /// 0019722 // calcium-mediated signaling // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0031013 // troponin I binding // inferred from physical interaction","chr1:24829386-24863510 (+) // 98.3 // p36.11"]
["11756334_x_at",0.17110825,0.20985413,0.21870327,-0.17110825,-0.1789875,-0.39780235,0.005395642,0.00404557,1.3652716,0.4491879,1.3652716,"up","ANXA3",306,"0006909 // phagocytosis // inferred from direct assay /// 0010595 // positive regulation of endothelial cell migration // inferred from direct assay /// 0021766 // hippocampus development // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from direct assay /// 0043312 // neutrophil degranulation // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from direct assay /// 0051054 // positive regulation of DNA metabolic process // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0070848 // response to growth factor stimulus // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // inferred from direct assay /// 0042581 // specific granule // inferred from direct assay /// 0043025 // neuronal cell body // inferred from electronic annotation","0004859 // phospholipase inhibitor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005544 // calcium-dependent phospholipid binding // inferred from direct assay /// 0005544 // calcium-dependent phospholipid binding // inferred from electronic annotation /// 0019834 // phospholipase A2 inhibitor activity // inferred from electronic annotation","chr4:79472900-79531569 (+) // 97.94 // q21.21"]
["11725257_at",-0.32636452,-0.2777195,-0.23620415,0.2667942,0.31550407,0.23620415,0.00084399927,9.184798e-5,-1.4670624,-0.55293024,1.4670624,"down","FZD10",11211,"0001944 // vasculature development // not recorded /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007420 // brain development // not recorded /// 0008406 // gonad development // not recorded /// 0009790 // embryo development // not recorded /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from sequence or structural similarity /// 0032855 // positive regulation of Rac GTPase activity // inferred from mutant phenotype /// 0032956 // regulation of actin cytoskeleton organization // inferred from mutant phenotype /// 0034259 // negative regulation of Rho GTPase activity // inferred from mutant phenotype /// 0038031 // non-canonical Wnt receptor signaling pathway via JNK cascade // inferred from mutant phenotype /// 0043507 // positive regulation of JUN kinase activity // inferred from mutant phenotype /// 0060070 // canonical Wnt receptor signaling pathway // not recorded /// 0071300 // cellular response to retinoic acid // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // not recorded /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042995 // cell projection // not recorded","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017147 // Wnt-protein binding // not recorded /// 0017147 // Wnt-protein binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // not recorded /// 0042813 // Wnt-activated receptor activity // not recorded /// 0042813 // Wnt-activated receptor activity // traceable author statement","chr12:130647003-130650279 (+) // 96.07 // q24.33"]
["11754916_x_at",-0.37698936,-0.32775164,-0.18504429,0.18957567,0.18504429,0.22734737,0.0021154154,0.001092327,-1.4115213,-0.49725085,1.4115213,"down","CCDC115",84317,"","0005764 // lysosome // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation","","chr2:131095819-131097609 (-) // 35.68 // q21.1"]
["11728249_a_at",0.41209936,0.2452817,0.23507214,-0.38842344,-0.23507166,-0.31688833,0.0021076347,0.0010855861,1.52726,0.6109456,1.52726,"up","TSFM",10102,"0006412 // translation // inferred from electronic annotation /// 0006414 // translational elongation // traceable author statement /// 0006414 // translational elongation // inferred from electronic annotation /// 0032784 // regulation of transcription elongation, DNA-dependent // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement","0003746 // translation elongation factor activity // inferred from electronic annotation","chr12:58176527-58191367 (+) // 97.13 // q14.1"]
["11754862_a_at",0.23902512,0.15302849,0.19738007,-0.29650974,-0.42689705,-0.15302849,0.0054940553,0.004143019,1.403105,0.488623,1.403105,"up","RARRES2",5919,"0001523 // retinoid metabolic process // inferred from direct assay /// 0001701 // in utero embryonic development // inferred from expression pattern /// 0010759 // positive regulation of macrophage chemotaxis // inferred from mutant phenotype /// 0048566 // embryonic digestive tract development // inferred from mutant phenotype /// 0050873 // brown fat cell differentiation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay","0004872 // receptor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction","chr7:150035407-150038754 (-) // 99.74 // q36.1"]
["11738993_at",0.348485,0.56924915,0.51907873,-0.60875344,-0.34848523,-0.50191665,0.0016560986,0.000665435,1.9525002,0.96532273,1.9525002,"up","SYT4",6860,"0006810 // transport // inferred from electronic annotation /// 0007269 // neurotransmitter secretion // inferred from electronic annotation","0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr18:40847856-40857615 (-) // 99.13 // q12.3"]
["11754106_a_at",0.35447884,0.28970432,0.1540451,-0.1540451,-0.23735905,-0.19878674,0.0030718595,0.0019142897,1.3782202,0.4628064,1.3782202,"up","EFNA1",1942,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000187 // activation of MAPK activity // inferred from electronic annotation /// 0001525 // angiogenesis // inferred from electronic annotation /// 0003180 // aortic valve morphogenesis // inferred from sequence or structural similarity /// 0003180 // aortic valve morphogenesis // inferred from electronic annotation /// 0003183 // mitral valve morphogenesis // inferred from sequence or structural similarity /// 0003183 // mitral valve morphogenesis // inferred from electronic annotation /// 0003199 // endocardial cushion to mesenchymal transition involved in heart valve formation // inferred from sequence or structural similarity /// 0003199 // endocardial cushion to mesenchymal transition involved in heart valve formation // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0010719 // negative regulation of epithelial to mesenchymal transition // inferred from sequence or structural similarity /// 0010719 // negative regulation of epithelial to mesenchymal transition // inferred from electronic annotation /// 0014028 // notochord formation // inferred from electronic annotation /// 0016477 // cell migration // inferred from direct assay /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0033628 // regulation of cell adhesion mediated by integrin // inferred from direct assay /// 0034446 // substrate adhesion-dependent cell spreading // inferred from direct assay /// 0043535 // regulation of blood vessel endothelial cell migration // inferred from electronic annotation /// 0045765 // regulation of angiogenesis // inferred from electronic annotation /// 0048013 // ephrin receptor signaling pathway // inferred from direct assay /// 0048013 // ephrin receptor signaling pathway // inferred from electronic annotation /// 0050730 // regulation of peptidyl-tyrosine phosphorylation // inferred from sequence or structural similarity /// 0050730 // regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0050770 // regulation of axonogenesis // inferred from electronic annotation /// 0061002 // negative regulation of dendritic spine morphogenesis // inferred from sequence or structural similarity /// 0061002 // negative regulation of dendritic spine morphogenesis // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation /// 0046658 // anchored to plasma membrane // inferred from electronic annotation","0005102 // receptor binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0046875 // ephrin receptor binding // inferred from physical interaction /// 0046875 // ephrin receptor binding // traceable author statement","chr1:155100425-155106688 (+) // 89.68 // q22"]
["11715880_a_at",0.42373466,0.37559223,0.25658894,-0.25658894,-0.36205578,-0.33952713,0.0013056329,0.00034301935,1.5925764,0.6713626,1.5925764,"up","PITPNA",5306,"0006629 // lipid metabolic process // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007601 // visual perception // traceable author statement /// 0015914 // phospholipid transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0008525 // phosphatidylcholine transporter activity // traceable author statement /// 0008526 // phosphatidylinositol transporter activity // traceable author statement","chr17:1421133-1466110 (-) // 94.49 // p13.3"]
["11750037_a_at",0.32249212,0.2576089,0.33608675,-0.30366516,-0.38720226,-0.2576089,0.0010019254,0.00015922071,1.5385323,0.62155473,1.5385323,"up","CHMP7",91782,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0016197 // endosomal transport // traceable author statement /// 0045324 // late endosome to vacuole transport // inferred from mutant phenotype","0000815 // ESCRT III complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0008565 // protein transporter activity // inferred from mutant phenotype","chr8:23104155-23116587 (+) // 98.85 // p21.3"]
["11756585_a_at",-0.23317337,-0.22159195,-0.20282173,0.2529688,0.2722273,0.20282173,0.0006380416,3.3248507e-5,-1.3773243,-0.4618683,1.3773243,"down","AQP3",360,"0002684 // positive regulation of immune system process // inferred from direct assay /// 0006810 // transport // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0006833 // water transport // inferred from electronic annotation /// 0007588 // excretion // traceable author statement /// 0015793 // glycerol transport // inferred from electronic annotation /// 0015840 // urea transport // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from direct assay /// 0033280 // response to vitamin D // traceable author statement /// 0042476 // odontogenesis // inferred from expression pattern /// 0045616 // regulation of keratinocyte differentiation // traceable author statement /// 0051592 // response to calcium ion // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070295 // renal water absorption // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred by curator /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation","0005215 // transporter activity // non-traceable author statement /// 0005215 // transporter activity // inferred from electronic annotation /// 0015250 // water channel activity // not recorded /// 0015250 // water channel activity // traceable author statement /// 0015250 // water channel activity // inferred from electronic annotation /// 0015254 // glycerol channel activity // inferred from direct assay","chr9:33441187-33443142 (-) // 93.33 // p13.3"]
["11724435_a_at",0.17610121,0.22046661,0.28479576,-0.27576733,-0.21170378,-0.17610121,0.0014617549,0.00047654973,1.3644428,0.44831195,1.3644428,"up","TPK1",27010,"0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006772 // thiamine metabolic process // inferred from electronic annotation /// 0009229 // thiamine diphosphate biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0042723 // thiamine-containing compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004788 // thiamine diphosphokinase activity // inferred from electronic annotation /// 0004788 // thiamine diphosphokinase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr7:144149033-144533146 (-) // 95.21 // q35"]
["11733126_a_at",0.23636913,0.24117756,0.22029114,-0.22860527,-0.23043346,-0.22029114,0.00015425935,3.3216915e-7,1.374642,0.4590559,1.374642,"up","PRIM1",5557,"0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0000722 // telomere maintenance via recombination // traceable author statement /// 0000723 // telomere maintenance // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0006269 // DNA replication, synthesis of RNA primer // inferred from electronic annotation /// 0006269 // DNA replication, synthesis of RNA primer // traceable author statement /// 0006270 // DNA-dependent DNA replication initiation // traceable author statement /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0032201 // telomere maintenance via semi-conservative replication // traceable author statement","0005654 // nucleoplasm // traceable author statement /// 0005658 // alpha DNA polymerase:primase complex // inferred from electronic annotation","0003896 // DNA primase activity // inferred from electronic annotation /// 0003896 // DNA primase activity // traceable author statement /// 0003899 // DNA-directed RNA polymerase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:57125009-57146167 (-) // 83.75 // q13.3"]
["11724505_at",0.21413803,0.14330769,0.19548702,-0.27287292,-0.1895361,-0.14330769,0.0018932574,0.00088384625,1.3069613,0.38621646,1.3069613,"up","MIS18A",54069,"0006334 // nucleosome assembly // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0051301 // cell division // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay","","chr21:33640538-33651467 (-) // 78.82 // q22.11"]
["11724160_a_at",0.3414545,0.42783546,0.3963294,-0.5801692,-0.3414545,-0.34451437,0.0016147236,0.00061580446,1.7539235,0.81058586,1.7539235,"up","GXYLT1",283464,"0016266 // O-glycan processing // inferred from direct assay","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016763 // transferase activity, transferring pentosyl groups // inferred from electronic annotation /// 0035252 // UDP-xylosyltransferase activity // inferred from direct assay","chr12:42475646-42538673 (-) // 87.68 // q12"]
["11741883_a_at",-0.13826656,-0.124197006,-0.13493347,0.3377447,0.28766632,0.124197006,0.005440024,0.004085875,-1.3034497,-0.382335,1.3034497,"down","MRPL39",54148,"","0005739 // mitochondrion // inferred from electronic annotation /// 0005761 // mitochondrial ribosome // non-traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation","chr21:26957969-26979801 (-) // 96.08 // q21.3"]
["11757591_s_at",-0.2184887,-0.30458164,-0.15134716,0.2106638,0.1779871,0.15134716,0.0020531714,0.0010442702,-1.3239101,-0.40480518,1.3239101,"down","PAN3",255967,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from electronic annotation /// 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement","0003676 // nucleic acid binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr13:28868943-28869472 (+) // 93.79 // q12.2"]
["11747724_a_at",0.18983269,0.31064892,0.23065996,-0.18983316,-0.26444054,-0.30546713,0.0015242294,0.00053365715,1.4112375,0.4969608,1.4112375,"up","NUDT12",83594,"0006742 // NADP catabolic process // inferred from direct assay /// 0019677 // NAD catabolic process // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation","0000210 // NAD+ diphosphatase activity // inferred from direct assay /// 0000210 // NAD+ diphosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0035529 // NADH pyrophosphatase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:102886208-102898490 (-) // 99.38 // q21.2"]
["11722903_s_at",0.22649956,0.28641033,0.31917763,-0.34090853,-0.3308878,-0.22650003,0.0011259156,0.00022387244,1.4915317,0.5767946,1.4915317,"up","GSTT2","2953 /// 653689","","0005737 // cytoplasm // inferred from electronic annotation","0004364 // glutathione transferase activity // inferred from electronic annotation /// 0004364 // glutathione transferase activity // non-traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation","chr22:24322338-24326106 (+) // 68.89 // q11.23"]
["11733884_a_at",0.3038044,0.23604393,0.1548891,-0.18242931,-0.1548891,-0.19964218,0.0017967653,0.00079903967,1.3292072,0.410566,1.3292072,"up","DEPDC1",55635,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from direct assay","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:68939836-68962904 (-) // 82.08 // p31.2"]
["11719122_at",0.26740646,0.19543743,0.19847202,-0.19543743,-0.29680443,-0.29193974,0.0012233602,0.00028641985,1.3965164,0.4818325,1.3965164,"up","DPCD",25911,"0003351 // epithelial cilium movement // inferred from electronic annotation /// 0021670 // lateral ventricle development // inferred from electronic annotation /// 0021678 // third ventricle development // inferred from electronic annotation /// 0030317 // sperm motility // inferred from electronic annotation /// 0060972 // left/right pattern formation // inferred from electronic annotation","","","chr10:103348048-103369613 (+) // 98.48 // q24.32"]
["11758556_s_at",-0.25887012,-0.51886654,-0.3805828,0.3395319,0.25887012,0.30917263,0.0019427151,0.0009402669,-1.6117538,-0.6886314,1.6117538,"down","PGM2",55276,"0005975 // carbohydrate metabolic process // traceable author statement /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005978 // glycogen biosynthetic process // traceable author statement /// 0005980 // glycogen catabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0016052 // carbohydrate catabolic process // not recorded /// 0044281 // small molecule metabolic process // traceable author statement /// 0046386 // deoxyribose phosphate catabolic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // not recorded /// 0005829 // cytosol // traceable author statement","0000287 // magnesium ion binding // inferred from electronic annotation /// 0004614 // phosphoglucomutase activity // not recorded /// 0004614 // phosphoglucomutase activity // inferred from electronic annotation /// 0008973 // phosphopentomutase activity // inferred from direct assay /// 0008973 // phosphopentomutase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0016868 // intramolecular transferase activity, phosphotransferases // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:37864142-37864560 (+) // 98.12 // p14"]
["11737813_s_at",-0.19734955,-0.15082645,-0.12225628,0.12225628,0.4422617,0.13639832,0.022877716,0.02156732,-1.3108017,-0.39044952,1.3108017,"down","NNT",23530,"0006099 // tricarboxylic acid cycle // traceable author statement /// 0015992 // proton transport // traceable author statement /// 0015992 // proton transport // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005746 // mitochondrial respiratory chain // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003957 // NAD(P)+ transhydrogenase (B-specific) activity // traceable author statement /// 0008746 // NAD(P)+ transhydrogenase activity // not recorded /// 0008750 // NAD(P)+ transhydrogenase (AB-specific) activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0050661 // NADP binding // inferred from direct assay /// 0050661 // NADP binding // inferred from electronic annotation /// 0051287 // NAD binding // traceable author statement","chr5:43603228-43705667 (+) // 99.57 // p12"]
["11718893_at",0.1622839,0.16935253,0.1330471,-0.1330471,-0.19507599,-0.41583776,0.011040431,0.009618774,1.3221459,0.40288147,1.3221459,"up","RFC1",5981,"0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0000722 // telomere maintenance via recombination // traceable author statement /// 0000723 // telomere maintenance // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0006261 // DNA-dependent DNA replication // traceable author statement /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006297 // nucleotide-excision repair, DNA gap filling // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007004 // telomere maintenance via telomerase // traceable author statement /// 0032201 // telomere maintenance via semi-conservative replication // traceable author statement /// 0043085 // positive regulation of catalytic activity // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005663 // DNA replication factor C complex // inferred from direct assay /// 0005663 // DNA replication factor C complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003689 // DNA clamp loader activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // traceable author statement /// 0008047 // enzyme activator activity // traceable author statement /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr4:39288726-39368020 (-) // 99.35 // p14"]
["11720564_a_at",0.38878536,0.38346958,0.31478024,-0.38804245,-0.3465414,-0.31478024,0.00059550256,2.3850878e-5,1.6382245,0.7121331,1.6382245,"up","NAV2",89797,"","0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr11:19734880-20143147 (+) // 98.11 // p15.1"]
["11755174_a_at",0.31512308,0.24845171,0.16622925,-0.16622925,-0.19408035,-0.19534683,0.0016183598,0.0006279682,1.3458213,0.42848682,1.3458213,"up","CGN",57530,"","0005923 // tight junction // inferred from direct assay /// 0005923 // tight junction // non-traceable author statement /// 0005923 // tight junction // inferred from electronic annotation /// 0016459 // myosin complex // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043296 // apical junction complex // inferred from electronic annotation","0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction","chr1:151506615-151511165 (+) // 80.41 // q21.3"]
["11715520_at",0.19026947,0.28459167,0.256876,-0.3329773,-0.2140789,-0.19026947,0.0017193909,0.0007228626,1.4041408,0.48968762,1.4041408,"up","MLEC",9761,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0030246 // carbohydrate binding // inferred from sequence or structural similarity","chr12:121124948-121139662 (+) // 92.78 // q24.31"]
["11758514_s_at",-0.24258614,-0.29806614,-0.30583954,0.44356918,0.32340145,0.24258614,0.0015573928,0.0005558094,-1.5354728,-0.61868286,1.5354728,"down","SERBP1",26135,"0043488 // regulation of mRNA stability // non-traceable author statement /// 0045767 // regulation of anti-apoptosis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr1:67873949-67874395 (-) // 98.89 // p31.3"]
["11764239_s_at",-0.28937626,-0.25335026,-0.15662289,0.16737843,0.15662289,0.17161846,0.0015598015,0.00056494103,-1.317975,-0.39832306,1.317975,"down","TBRG1",84897,"0006260 // DNA replication // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0032066 // nucleolus to nucleoplasm transport // inferred from direct assay /// 0050821 // protein stabilization // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr11:124493744-124494259 (+) // 99.03 // q24.2"]
["11745353_a_at",0.14324665,0.1555872,0.16779089,-0.43689346,-0.31260395,-0.14324665,0.0074670613,0.0060617616,1.3690004,0.4531229,1.3690004,"up","C2orf54",79919,"","","","chr2:241825465-241831455 (-) // 81.61 // q37.3"]
["11737218_x_at",0.5324769,0.41920662,0.076756,-0.09073782,-0.076756,-0.083314896,0.0369682,0.0358219,1.3438909,0.42641607,1.3438909,"up","HHLA3",11147,"","","0005515 // protein binding // inferred from physical interaction","chr1:70820490-70820893 (+) // 30.17 // p31.1"]
["11756855_a_at",0.1555214,0.42939854,0.28255653,-0.18442678,-0.15552092,-0.18442678,0.0056884657,0.004339527,1.3793135,0.46395034,1.3793135,"up","GCNT2",2651,"0006024 // glycosaminoglycan biosynthetic process // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008109 // N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase activity // inferred from electronic annotation /// 0008109 // N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase activity // traceable author statement /// 0008375 // acetylglucosaminyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr6:10509317-10627455 (+) // 77.47 // p24.3"]
["11736038_x_at",0.16875935,0.25916147,0.2057662,-0.18285656,-0.23735857,-0.16875935,0.0012006324,0.0002637048,1.3264349,0.40755385,1.3264349,"up","TADA3",10474,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0030520 // intracellular estrogen receptor signaling pathway // traceable author statement /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay","0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005671 // Ada2/Gcn5/Ada3 transcription activator complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0030914 // STAGA complex // inferred from direct assay /// 0030914 // STAGA complex // inferred from electronic annotation /// 0033276 // transcription factor TFTC complex // inferred from direct assay","0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0004402 // histone acetyltransferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016922 // ligand-dependent nuclear receptor binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from electronic annotation","chr3:9824812-9834420 (-) // 67.14 // p25.3"]
["11758797_s_at",-0.31702423,-0.2472949,-0.17263222,0.17263222,0.22620296,0.1745882,0.0016357829,0.0006431825,-1.3535907,-0.4367916,1.3535907,"down","SRSF10",10772,"0000244 // assembly of spliceosomal tri-snRNP // non-traceable author statement /// 0000375 // RNA splicing, via transesterification reactions // inferred from direct assay /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006376 // mRNA splice site selection // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // non-traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0016482 // cytoplasmic transport // inferred from direct assay /// 0048025 // negative regulation of nuclear mRNA splicing, via spliceosome // inferred from direct assay","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0050733 // RS domain binding // non-traceable author statement /// 0051082 // unfolded protein binding // non-traceable author statement","chr1:24290836-24306885 (-) // 85.86 // p36.11 /// chr1_gl000191_random:34172-50213 (-) // 85.84 //"]
["11723804_a_at",0.45361233,0.49796104,0.5233698,-0.5353627,-0.45361185,-0.64658403,0.0007292708,6.375623e-5,2.0517201,1.036834,2.0517201,"up","AKAP12",9590,"0006605 // protein targeting // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0010739 // positive regulation of protein kinase A signaling cascade // inferred from mutant phenotype /// 0030819 // positive regulation of cAMP biosynthetic process // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005938 // cell cortex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008179 // adenylate cyclase binding // inferred from physical interaction /// 0051018 // protein kinase A binding // traceable author statement","chr6:151561133-151679671 (+) // 97.17 // q25.1"]
["11717281_a_at",0.3958516,0.24624395,0.41747665,-0.30598068,-0.24624348,-0.29082298,0.0013318703,0.0003648017,1.5520838,0.6342065,1.5520838,"up","ASAP1",50807,"0007165 // signal transduction // inferred from electronic annotation /// 0030030 // cell projection organization // inferred from electronic annotation /// 0032312 // regulation of ARF GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0046847 // filopodium assembly // inferred from electronic annotation /// 0060271 // cilium morphogenesis // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008060 // ARF GTPase activator activity // inferred from electronic annotation /// 0008093 // cytoskeletal adaptor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:131064352-131456099 (-) // 98.96 // q24.21"]
["11745949_x_at",0.20115566,0.2710476,0.26081085,-0.30591297,-0.28561687,-0.20115566,0.0010877973,0.00019520131,1.4226359,0.5085665,1.4226359,"up","CHEK1",1111,"0000075 // cell cycle checkpoint // traceable author statement /// 0000077 // DNA damage checkpoint // inferred from direct assay /// 0000077 // DNA damage checkpoint // inferred from mutant phenotype /// 0000077 // DNA damage checkpoint // inferred from electronic annotation /// 0000086 // G2/M transition of mitotic cell cycle // inferred from electronic annotation /// 0006260 // DNA replication // traceable author statement /// 0006281 // DNA repair // inferred from mutant phenotype /// 0006281 // DNA repair // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from mutant phenotype /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0006975 // DNA damage induced protein phosphorylation // inferred from direct assay /// 0006975 // DNA damage induced protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0010569 // regulation of double-strand break repair via homologous recombination // inferred from direct assay /// 0010767 // regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage // inferred from sequence or structural similarity /// 0010767 // regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018107 // peptidyl-threonine phosphorylation // inferred from direct assay /// 0031572 // G2/M transition DNA damage checkpoint // inferred from mutant phenotype /// 0031572 // G2/M transition DNA damage checkpoint // inferred from electronic annotation /// 0033261 // regulation of S phase // inferred from electronic annotation /// 0035407 // histone H3-T11 phosphorylation // inferred from direct assay /// 0035407 // histone H3-T11 phosphorylation // inferred from electronic annotation /// 0045839 // negative regulation of mitosis // inferred from direct assay /// 0046602 // regulation of mitotic centrosome separation // inferred from direct assay /// 0048096 // chromatin-mediated maintenance of transcription // inferred from sequence or structural similarity /// 0048096 // chromatin-mediated maintenance of transcription // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern /// 0071310 // cellular response to organic substance // inferred from electronic annotation /// 0071313 // cellular response to caffeine // inferred from electronic annotation /// 0090399 // replicative senescence // non-traceable author statement /// 2000615 // regulation of histone H3-K9 acetylation // inferred from sequence or structural similarity /// 2000615 // regulation of histone H3-K9 acetylation // inferred from electronic annotation","0000781 // chromosome, telomeric region // inferred from direct assay /// 0000785 // chromatin // inferred from sequence or structural similarity /// 0000785 // chromatin // inferred from electronic annotation /// 0000794 // condensed nuclear chromosome // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005657 // replication fork // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0035402 // histone kinase activity (H3-T11 specific) // inferred from direct assay /// 0035402 // histone kinase activity (H3-T11 specific) // inferred from electronic annotation","chr11:125495620-125525629 (+) // 99.13 // q24.2"]
["11721893_a_at",0.28550053,0.2606516,0.1292181,-0.1292181,-0.17931747,-0.20135307,0.0028598784,0.0017272087,1.3150214,0.3950863,1.3150214,"up","CHEK2",11200,"0000075 // cell cycle checkpoint // traceable author statement /// 0000077 // DNA damage checkpoint // inferred from electronic annotation /// 0000077 // DNA damage checkpoint // traceable author statement /// 0000086 // G2/M transition of mitotic cell cycle // inferred from mutant phenotype /// 0006281 // DNA repair // inferred from electronic annotation /// 0006302 // double-strand break repair // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from mutant phenotype /// 0006974 // response to DNA damage stimulus // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0006975 // DNA damage induced protein phosphorylation // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0008630 // DNA damage response, signal transduction resulting in induction of apoptosis // inferred from direct assay /// 0008630 // DNA damage response, signal transduction resulting in induction of apoptosis // inferred from mutant phenotype /// 0010332 // response to gamma radiation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0042176 // regulation of protein catabolic process // inferred from mutant phenotype /// 0042770 // signal transduction in response to DNA damage // inferred from direct assay /// 0042770 // signal transduction in response to DNA damage // inferred from electronic annotation /// 0044257 // cellular protein catabolic process // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation /// 0072428 // signal transduction involved in intra-S DNA damage checkpoint // inferred from mutant phenotype /// 0090307 // spindle assembly involved in mitosis // inferred from mutant phenotype /// 0090399 // replicative senescence // non-traceable author statement","0000781 // chromosome, telomeric region // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0016605 // PML body // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr22:29083730-29137826 (-) // 92.09 // q12.1"]
["11757182_a_at",-0.65553284,-0.42538738,-0.4752655,0.42538738,0.5646591,0.4830017,0.0011437805,0.00023514063,-2.0135546,-1.0097446,2.0135546,"down","UHMK1",127933,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0018105 // peptidyl-serine phosphorylation // inferred from sequence or structural similarity /// 0018105 // peptidyl-serine phosphorylation // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0031175 // neuron projection development // inferred from electronic annotation /// 0045948 // positive regulation of translational initiation // inferred from sequence or structural similarity /// 0045948 // positive regulation of translational initiation // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046825 // regulation of protein export from nucleus // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030424 // axon // inferred from sequence or structural similarity /// 0030424 // axon // inferred from electronic annotation /// 0032839 // dendrite cytoplasm // inferred from sequence or structural similarity /// 0032839 // dendrite cytoplasm // inferred from electronic annotation /// 0071598 // neuronal ribonucleoprotein granule // inferred from sequence or structural similarity /// 0071598 // neuronal ribonucleoprotein granule // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred by curator /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred by curator /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0043021 // ribonucleoprotein complex binding // inferred from sequence or structural similarity /// 0043021 // ribonucleoprotein complex binding // inferred from electronic annotation","chr1:162467874-162494598 (+) // 99.15 // q23.3"]
["11744841_a_at",-0.16100311,-0.21763706,-0.23672152,0.28024864,0.16100311,0.16171741,0.0018943711,0.000885182,-1.3251083,-0.4061103,1.3251083,"down","TIPRL",261726,"0000077 // DNA damage checkpoint // inferred from mutant phenotype /// 0034048 // negative regulation of protein phosphatase type 2A activity // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:168148188-168171347 (+) // 96.47 // q24.2"]
["11719267_s_at",0.21420097,0.31900978,0.32492638,-0.21420097,-0.21800804,-0.33454037,0.0015242294,0.0005325158,1.455615,0.54162884,1.455615,"up","SERINC1",57515,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006658 // phosphatidylserine metabolic process // inferred from sequence or structural similarity /// 0006658 // phosphatidylserine metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // inferred from sequence or structural similarity /// 0006665 // sphingolipid metabolic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0015825 // L-serine transport // inferred from sequence or structural similarity /// 0015825 // L-serine transport // inferred from electronic annotation /// 0051347 // positive regulation of transferase activity // inferred from sequence or structural similarity /// 0051347 // positive regulation of transferase activity // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from sequence or structural similarity /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0015194 // L-serine transmembrane transporter activity // inferred from sequence or structural similarity /// 0015194 // L-serine transmembrane transporter activity // inferred from electronic annotation","chr6:122764150-122793051 (-) // 90.47 // q22.31"]
["11740171_s_at",-0.1631751,-0.24952888,-0.22288847,0.46257114,0.32534027,0.16317463,0.0055692703,0.0042261216,-1.4428215,-0.5288928,1.4428215,"down","PBRM1",55193,"0001890 // placenta development // inferred from electronic annotation /// 0006338 // chromatin remodeling // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007067 // mitosis // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0016568 // chromatin modification // inferred from electronic annotation","0000228 // nuclear chromosome // non-traceable author statement /// 0000776 // kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // non-traceable author statement /// 0003682 // chromatin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr3:52579367-52718931 (-) // 96.62 // p21.1"]
["11727990_at",0.1580658,0.24019432,0.20080757,-0.24768782,-0.20224524,-0.15806627,0.0012808557,0.00033041884,1.3216642,0.40235567,1.3216642,"up","FAXC",84553,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:99719044-99797818 (-) // 86.65 // q16.2"]
["11750236_a_at",-0.18967247,-0.19927216,-0.14773893,0.27017927,0.14773893,0.4202304,0.0060143746,0.0046752566,-1.3739004,-0.45827737,1.3739004,"down","AGBL1",123624,"0006508 // proteolysis // inferred from electronic annotation /// 0035609 // C-terminal protein deglutamylation // inferred from sequence or structural similarity /// 0035610 // protein side chain deglutamylation // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0004180 // carboxypeptidase activity // inferred from electronic annotation /// 0004181 // metallocarboxypeptidase activity // inferred from sequence or structural similarity /// 0004181 // metallocarboxypeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0015631 // tubulin binding // inferred from sequence or structural similarity /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:86805855-86839446 (+) // 89.4 // q25.3"]
["11718642_s_at",-0.3347578,-0.59473324,-0.42071247,0.43298054,0.47021008,0.3347578,0.00156382,0.00056744955,-1.8184602,-0.86271733,1.8184602,"down","OSBPL8",114882,"0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation","","0005543 // phospholipid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation","chr12:76745576-76953589 (-) // 99.71 // q21.2"]
["11720599_s_at",-0.44831467,-0.46085262,-0.516613,0.5580387,0.54782104,0.44831467,0.00055139343,1.690206e-5,-1.9907584,-0.9933182,1.9907584,"down","SUB1",10923,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr5:32586219-32604172 (+) // 87.52 // p13.3"]
["11757679_s_at",-0.23296547,-0.2471695,-0.14398861,0.14398861,0.20411587,0.20075512,0.0014749195,0.00048909907,-1.3112969,-0.39099437,1.3112969,"down","SMAD5",4090,"0001503 // ossification // inferred from electronic annotation /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0001880 // Mullerian duct regression // inferred from electronic annotation /// 0002051 // osteoblast fate commitment // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // non-traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0007281 // germ cell development // inferred from electronic annotation /// 0009880 // embryonic pattern specification // inferred from sequence or structural similarity /// 0030218 // erythrocyte differentiation // inferred from electronic annotation /// 0030509 // BMP signaling pathway // inferred from sequence or structural similarity /// 0030509 // BMP signaling pathway // traceable author statement /// 0030509 // BMP signaling pathway // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0060048 // cardiac muscle contraction // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation","0005622 // intracellular // non-traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016021 // integral to membrane // non-traceable author statement","0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005057 // receptor signaling protein activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0030618 // transforming growth factor beta receptor, pathway-specific cytoplasmic mediator activity // traceable author statement /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr5:135517992-135518421 (+) // 86.14 // q31.1"]
["11755028_a_at",0.56621027,0.4453206,0.5512538,-0.4453206,-0.5684128,-0.51018095,0.0006672249,3.870259e-5,2.0404675,1.0288997,2.0404675,"up","DENND1A",57706,"0048488 // synaptic vesicle endocytosis // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0030665 // clathrin coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation","chr9:126163536-126692419 (-) // 96.06 // q33.3"]
["11759740_x_at",-0.22097397,-0.336411,-0.24950027,0.35328484,0.22097349,0.260633,0.001459056,0.0004736629,-1.4613066,-0.54725885,1.4613066,"down","CDC23",8697,"0000075 // cell cycle checkpoint // traceable author statement /// 0000080 // G1 phase of mitotic cell cycle // inferred from direct assay /// 0000278 // mitotic cell cycle // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0007049 // cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from direct assay /// 0007067 // mitosis // inferred from electronic annotation /// 0007067 // mitosis // traceable author statement /// 0007080 // mitotic metaphase plate congression // inferred from direct assay /// 0007091 // mitotic metaphase/anaphase transition // traceable author statement /// 0007094 // mitotic cell cycle spindle assembly checkpoint // traceable author statement /// 0007096 // regulation of exit from mitosis // traceable author statement /// 0016567 // protein ubiquitination // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030071 // regulation of mitotic metaphase/anaphase transition // inferred from direct assay /// 0030071 // regulation of mitotic metaphase/anaphase transition // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay","0005622 // intracellular // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005680 // anaphase-promoting complex // inferred from direct assay /// 0005680 // anaphase-promoting complex // inferred from electronic annotation /// 0005680 // anaphase-promoting complex // traceable author statement /// 0005829 // cytosol // traceable author statement","0004842 // ubiquitin-protein ligase activity // traceable author statement","chr5:137541560-137549033 (-) // 84.99 // q31.2"]
["11743402_at",0.27501392,0.1925335,0.21160507,-0.1925335,-0.2063036,-0.32566643,0.0016711045,0.00067578256,1.3830807,0.46788532,1.3830807,"up","CDC27",996,"0000075 // cell cycle checkpoint // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007091 // mitotic metaphase/anaphase transition // inferred from mutant phenotype /// 0007091 // mitotic metaphase/anaphase transition // traceable author statement /// 0007094 // mitotic cell cycle spindle assembly checkpoint // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005680 // anaphase-promoting complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // traceable author statement /// 0005819 // spindle // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005876 // spindle microtubule // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0019903 // protein phosphatase binding // inferred from physical interaction","chr17:45195068-45266663 (-) // 94.09 // q21.32"]
["11717916_s_at",0.88749456,0.54764175,0.4056139,-0.4056139,-0.47621298,-0.4774661,0.0029613448,0.0018150214,2.094609,1.066681,2.094609,"up","CKMT1A","1159 /// 548596","0006600 // creatine metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004111 // creatine kinase activity // inferred from electronic annotation /// 0004111 // creatine kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr15:43885054-43891601 (+) // 97.87 // q15.3 /// chr15:43984886-43991417 (+) // 97.82 // q15.3"]
["11739645_x_at",0.38439178,0.19311905,0.13253593,-0.13253593,-0.1732006,-0.15013695,0.008611683,0.007180111,1.3091588,0.38864008,1.3091588,"up","TULP3",7289,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0001843 // neural tube closure // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // non-traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008589 // regulation of smoothened signaling pathway // inferred from electronic annotation /// 0021904 // dorsal/ventral neural tube patterning // inferred from electronic annotation /// 0021914 // negative regulation of smoothened signaling pathway involved in ventral spinal cord patterning // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0021953 // central nervous system neuron differentiation // inferred from electronic annotation /// 0031076 // embryonic camera-type eye development // inferred from electronic annotation /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0045879 // negative regulation of smoothened signaling pathway // inferred from electronic annotation /// 0048702 // embryonic neurocranium morphogenesis // inferred from electronic annotation /// 0060173 // limb development // inferred from electronic annotation /// 0060434 // bronchus morphogenesis // inferred from electronic annotation /// 0060831 // smoothened signaling pathway involved in dorsal/ventral neural tube patterning // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // non-traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0035085 // cilium axoneme // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005546 // phosphatidylinositol-4,5-bisphosphate binding // non-traceable author statement","chr12:3000032-3050304 (+) // 98.72 // p13.33"]
["11719738_at",-0.5255456,-0.377522,-0.4885006,0.5237398,0.570343,0.3775215,0.001091852,0.00019925716,-1.9377613,-0.9543909,1.9377613,"down","DCP2",167227,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from mutant phenotype /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from electronic annotation /// 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement /// 0071044 // histone mRNA catabolic process // inferred from mutant phenotype","0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016442 // RNA-induced silencing complex // inferred from direct assay","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016896 // exoribonuclease activity, producing 5'-phosphomonoesters // traceable author statement /// 0030145 // manganese ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:112312398-112356761 (+) // 96.56 // q22.2"]
["11725155_at",0.1499958,0.1323142,0.12794161,-0.12794161,-0.21426344,-0.40231228,0.010508507,0.009064832,1.3057901,0.38492298,1.3057901,"up","FJX1",24147,"","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement","","chr11:35639649-35642416 (+) // 92.9 // p13"]
["11716083_a_at",-0.29816246,-0.32489777,-0.36777592,0.38198185,0.30978203,0.29816246,0.0006672249,3.7466234e-5,-1.580361,-0.6602542,1.580361,"down","AHSA1",10598,"0006457 // protein folding // inferred from sequence or structural similarity /// 0006950 // response to stress // inferred from sequence or structural similarity /// 0006950 // response to stress // inferred from electronic annotation /// 0032781 // positive regulation of ATPase activity // inferred from direct assay /// 0032781 // positive regulation of ATPase activity // inferred from sequence or structural similarity /// 0032781 // positive regulation of ATPase activity // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0001671 // ATPase activator activity // inferred from direct assay /// 0001671 // ATPase activator activity // inferred from sequence or structural similarity /// 0001671 // ATPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0051087 // chaperone binding // inferred from direct assay /// 0051087 // chaperone binding // inferred from electronic annotation","chr14:77924373-77935815 (+) // 97.35 // q24.3"]
["11719894_s_at",-0.5803313,-0.32490492,-0.20475674,0.22337437,0.31051445,0.20475674,0.007327584,0.0059327553,-1.5328461,-0.61621284,1.5328461,"down","FAM91A2","157769 /// 57234 /// 728855","","","","chr8:124780678-124827688 (+) // 98.14 // q24.13"]
["11719897_x_at",-0.556901,-0.53566694,-0.20171356,0.20171356,0.31520367,0.26195765,0.0058008186,0.0044559543,-1.6144605,-0.6910521,1.6144605,"down","FAM91A1",157769,"","","","chr8:124780678-124827688 (+) // 98.14 // q24.13"]
["11750935_a_at",0.27977657,0.2080822,0.18455887,-0.26668406,-0.2062521,-0.18455887,0.0012361597,0.00030026503,1.359715,0.44330424,1.359715,"up","BMP6",654,"0001501 // skeletal system development // traceable author statement /// 0001503 // ossification // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001654 // eye development // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // inferred from electronic annotation /// 0001958 // endochondral ossification // inferred from electronic annotation /// 0003323 // type B pancreatic cell development // inferred from direct assay /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // inferred from mutant phenotype /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030501 // positive regulation of bone mineralization // inferred from direct assay /// 0030509 // BMP signaling pathway // inferred from direct assay /// 0030509 // BMP signaling pathway // inferred from electronic annotation /// 0030539 // male genitalia development // inferred from electronic annotation /// 0032349 // positive regulation of aldosterone biosynthetic process // inferred from direct assay /// 0040007 // growth // inferred from electronic annotation /// 0045603 // positive regulation of endothelial cell differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // non-traceable author statement /// 0050679 // positive regulation of epithelial cell proliferation // inferred from direct assay /// 0050714 // positive regulation of protein secretion // non-traceable author statement /// 0051216 // cartilage development // inferred from electronic annotation /// 0060395 // SMAD protein signal transduction // inferred from direct assay /// 2000105 // positive regulation of DNA-dependent DNA replication // non-traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0070700 // BMP receptor binding // inferred from physical interaction","chr6:7726331-7880740 (+) // 97.07 // p24.3"]
["11717916_s_at",0.88749456,0.54764175,0.4056139,-0.4056139,-0.47621298,-0.4774661,0.0029613448,0.0018150214,2.094609,1.066681,2.094609,"up","CKMT1B","1159 /// 548596","0006600 // creatine metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004111 // creatine kinase activity // inferred from electronic annotation /// 0004111 // creatine kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr15:43885054-43891601 (+) // 97.87 // q15.3 /// chr15:43984886-43991417 (+) // 97.82 // q15.3"]
["11722522_a_at",0.30287838,0.1784625,0.21237087,-0.18188429,-0.1784625,-0.20946646,0.0013662435,0.0003929404,1.3390176,0.421175,1.3390176,"up","SUSD1",64420,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr9:114802798-114937800 (-) // 93.06 // q31.3"]
["11720262_a_at",0.16071033,0.22295094,0.18596172,-0.19380283,-0.2262907,-0.16071033,0.0009366118,0.00012626672,1.3044807,0.38347563,1.3044807,"up","MITF",4286,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006461 // protein complex assembly // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030316 // osteoclast differentiation // inferred from electronic annotation /// 0030318 // melanocyte differentiation // non-traceable author statement /// 0030318 // melanocyte differentiation // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043010 // camera-type eye development // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043473 // pigmentation // inferred from electronic annotation /// 0045165 // cell fate commitment // inferred from electronic annotation /// 0045670 // regulation of osteoclast differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046849 // bone remodeling // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr3:69788585-70017487 (+) // 97.6 // p14.1"]
["11749363_a_at",0.19360065,0.18179607,0.19695663,-0.261981,-0.18179607,-0.3620186,0.0019375678,0.0009287308,1.3749536,0.459383,1.3749536,"up","COPS8",10920,"0010388 // cullin deneddylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008180 // signalosome // inferred from direct assay /// 0008180 // signalosome // inferred from electronic annotation","","chr2:237994528-238004527 (+) // 99.6 // q37.3"]
["11719894_s_at",-0.5803313,-0.32490492,-0.20475674,0.22337437,0.31051445,0.20475674,0.007327584,0.0059327553,-1.5328461,-0.61621284,1.5328461,"down","LOC728855","157769 /// 57234 /// 728855","","","","chr8:124780678-124827688 (+) // 98.14 // q24.13"]
["11758563_at",0.4498062,0.4444208,0.3062234,-0.30622292,-0.416533,-0.4025979,0.0010771177,0.00018612259,1.711508,0.7752681,1.711508,"up","LOC100653153","100506290 /// 100653153 /// 151194","0032259 // methylation // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr2:208477464-208477880 (-) // 98.81 // q33.3"]
["11716287_at",0.48340988,0.3083725,0.25365448,-0.2597618,-0.25365448,-0.294096,0.0019407267,0.00093181274,1.5343735,0.6176497,1.5343735,"up","RABAC1",10567,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0070064 // proline-rich region binding // inferred from electronic annotation","chr19:42460834-42463540 (-) // 80.21 // q13.2"]
["11743537_a_at",0.30373764,0.24670362,0.38412952,-0.6036248,-0.24670362,-0.5967002,0.004395149,0.0030934683,1.7337146,0.79386646,1.7337146,"up","DNAJC18",202052,"0006457 // protein folding // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0031072 // heat shock protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr5:138747380-138780171 (-) // 86.77 // q31.2"]
["11755281_a_at",0.3382969,0.1703062,0.21272182,-0.1703062,-0.21583843,-0.19461346,0.0021648712,0.0011365107,1.351,0.43402767,1.351,"up","LOC100653157","100652886 /// 100653157 /// 7045","0001525 // angiogenesis // inferred from expression pattern /// 0002062 // chondrocyte differentiation // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007162 // negative regulation of cell adhesion // traceable author statement /// 0007601 // visual perception // inferred from electronic annotation /// 0007601 // visual perception // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity","0005178 // integrin binding // traceable author statement /// 0050840 // extracellular matrix binding // inferred from electronic annotation","chr5:135364675-135399097 (+) // 92.98 // q31.1"]
["11724150_a_at",0.29720688,0.2686062,0.28586578,-0.2686062,-0.3118124,-0.33385754,0.00047635857,9.436905e-6,1.5038406,0.58865166,1.5038406,"up","SWI5",375757,"0000724 // double-strand break repair via homologous recombination // inferred from mutant phenotype /// 0000724 // double-strand break repair via homologous recombination // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0032798 // Swi5-Sfr1 complex // inferred from direct assay /// 0032798 // Swi5-Sfr1 complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr9:131038424-131051268 (+) // 97.13 // q34.11"]
["11724786_s_at",0.51105404,0.42319107,0.4497614,-0.42319107,-0.5082836,-0.52934647,0.0005783946,2.192021e-5,1.9295654,0.9482759,1.9295654,"up","C14orf129",51527,"","0005737 // cytoplasm // inferred from electronic annotation","","chr14:96830716-96853623 (+) // 83.97 // q32.2"]
["11764167_at",0.3796358,0.29976225,0.50957394,-0.299762,-0.33392882,-0.39608788,0.0013662435,0.00039026284,1.6696938,0.7395836,1.6696938,"up","LINC00570",100874055,"","","","chr2:11534106-11542638 (+) // 73.37 // p25.1"]
["11755895_a_at",-0.28997612,-0.4233842,-0.2588644,0.28911686,0.3163805,0.2588644,0.0012764687,0.00032378986,-1.5285836,-0.6121955,1.5285836,"down","FAM129A",116496,"0001933 // negative regulation of protein phosphorylation // inferred from sequence or structural similarity /// 0001933 // negative regulation of protein phosphorylation // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from sequence or structural similarity /// 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0034976 // response to endoplasmic reticulum stress // inferred from sequence or structural similarity /// 0034976 // response to endoplasmic reticulum stress // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from sequence or structural similarity /// 0045727 // positive regulation of translation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","","chr1:184763251-184837177 (-) // 97.46 // q25.3"]
["11749905_a_at",0.38687706,0.3321066,0.29677963,-0.29677963,-0.40985012,-0.5200796,0.0014103054,0.00042576404,1.6788704,0.7474909,1.6788704,"up","CYR61",3491,"0001558 // regulation of cell growth // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0002041 // intussusceptive angiogenesis // inferred from electronic annotation /// 0003181 // atrioventricular valve morphogenesis // inferred from electronic annotation /// 0003278 // apoptotic process involved in heart morphogenesis // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from electronic annotation /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0010518 // positive regulation of phospholipase activity // inferred from electronic annotation /// 0010811 // positive regulation of cell-substrate adhesion // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0030513 // positive regulation of BMP signaling pathway // inferred from genetic interaction /// 0033690 // positive regulation of osteoblast proliferation // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0044319 // wound healing, spreading of cells // inferred from direct assay /// 0045597 // positive regulation of cell differentiation // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // inferred from direct assay /// 0045860 // positive regulation of protein kinase activity // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0060413 // atrial septum morphogenesis // inferred from electronic annotation /// 0060591 // chondroblast differentiation // inferred from electronic annotation /// 0060710 // chorio-allantoic fusion // inferred from electronic annotation /// 0060716 // labyrinthine layer blood vessel development // inferred from electronic annotation /// 0061036 // positive regulation of cartilage development // inferred from electronic annotation /// 0070372 // regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0072593 // reactive oxygen species metabolic process // inferred from electronic annotation /// 2000304 // positive regulation of ceramide biosynthetic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0005178 // integrin binding // inferred from electronic annotation /// 0005520 // insulin-like growth factor binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from electronic annotation /// 0050840 // extracellular matrix binding // inferred from electronic annotation","chr1:86046443-86048763 (+) // 99.93 // p22.3"]
["11722072_at",-0.3419671,-0.5128932,-0.5578103,0.5673752,0.34196758,0.41385365,0.001616806,0.0006190097,-1.8815944,-0.91195565,1.8815944,"down","MESDC1",59274,"","","","chr15:81293294-81296708 (+) // 94.0 // q25.1"]
["11719093_at",-0.14472628,-0.33875751,-0.3207469,0.14472675,0.22674656,0.21467447,0.0034969319,0.002287614,-1.3788443,-0.4634595,1.3788443,"down","CYB5B",80777,"0006810 // transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008047 // enzyme activator activity // inferred from electronic annotation /// 0020037 // heme binding // inferred from direct assay /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:69458427-69500167 (+) // 96.02 // q22.1"]
["11718258_at",0.16229057,0.19555092,0.16136074,-0.25936508,-0.16136074,-0.2778368,0.0014109603,0.00042848484,1.3249351,0.4059216,1.3249351,"up","ANKRD27",84079,"0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0045022 // early endosome to late endosome transport // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from direct assay /// 0005769 // early endosome // inferred from direct assay","0005085 // guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005096 // GTPase activator activity // inferred from electronic annotation","chr19:33087911-33166105 (-) // 97.78 // q13.11"]
["11731478_x_at",-0.34037685,-0.24574852,-0.3275156,0.31284618,0.24574804,0.2526493,0.00085385906,9.487323e-5,-1.4896377,-0.5749615,1.4896377,"down","CHMP1B",57132,"0006810 // transport // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction","chr18:11850937-11854448 (+) // 91.22 // p11.21"]
["11716378_a_at",-0.22297192,-0.39756966,-0.47093773,0.22297192,0.2929926,0.3479519,0.002422976,0.0013537788,-1.5711256,-0.65179855,1.5711256,"down","TOMM20",9804,"0006605 // protein targeting // inferred from electronic annotation /// 0006626 // protein targeting to mitochondrion // inferred from direct assay /// 0006626 // protein targeting to mitochondrion // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005740 // mitochondrial envelope // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005742 // mitochondrial outer membrane translocase complex // non-traceable author statement /// 0005742 // mitochondrial outer membrane translocase complex // traceable author statement /// 0005742 // mitochondrial outer membrane translocase complex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0015450 // P-P-bond-hydrolysis-driven protein transmembrane transporter activity // inferred from direct assay /// 0051082 // unfolded protein binding // inferred from direct assay /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr1:235272383-235292313 (-) // 79.42 // q42.3"]
["11759525_at",0.3642249,0.38815975,0.32103348,-0.32103348,-0.33025265,-0.52089167,0.0013662435,0.00038785784,1.6800824,0.748532,1.6800824,"up","GADD45B",4616,"0000185 // activation of MAPKKK activity // traceable author statement /// 0000186 // activation of MAPKK activity // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0006950 // response to stress // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","","chr19:2476123-2478256 (+) // 91.74 // p13.3"]
["11722200_s_at",-0.17823315,-0.2266779,-0.2060504,0.4439006,0.3734827,0.17823315,0.0039314847,0.0026751703,-1.4494704,-0.5355259,1.4494704,"down","ADAM12",8038,"0006508 // proteolysis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007520 // myoblast fusion // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // traceable author statement /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:127701871-128077219 (-) // 99.28 // q26.2"]
["11721009_at",-0.17286777,-0.14808464,-0.17319107,0.2796631,0.4488926,0.14808464,0.007830824,0.006407651,-1.3726159,-0.45692796,1.3726159,"down","MED1",5469,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000902 // cell morphogenesis // inferred from mutant phenotype /// 0000902 // cell morphogenesis // inferred from sequence or structural similarity /// 0001525 // angiogenesis // inferred from sequence or structural similarity /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0001892 // embryonic placenta development // inferred from electronic annotation /// 0002088 // lens development in camera-type eye // inferred from sequence or structural similarity /// 0002088 // lens development in camera-type eye // inferred from electronic annotation /// 0002154 // thyroid hormone mediated signaling pathway // inferred from mutant phenotype /// 0002154 // thyroid hormone mediated signaling pathway // inferred from sequence or structural similarity /// 0003222 // ventricular trabecula myocardium morphogenesis // inferred from electronic annotation /// 0003406 // retinal pigment epithelium development // inferred from electronic annotation /// 0006260 // DNA replication // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006356 // regulation of transcription from RNA polymerase I promoter // inferred from direct assay /// 0006356 // regulation of transcription from RNA polymerase I promoter // inferred from sequence or structural similarity /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006590 // thyroid hormone generation // inferred from electronic annotation /// 0006702 // androgen biosynthetic process // inferred from mutant phenotype /// 0006702 // androgen biosynthetic process // inferred from sequence or structural similarity /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0010628 // positive regulation of gene expression // inferred from sequence or structural similarity /// 0010839 // negative regulation of keratinocyte proliferation // inferred from mutant phenotype /// 0010839 // negative regulation of keratinocyte proliferation // inferred from sequence or structural similarity /// 0030216 // keratinocyte differentiation // inferred from mutant phenotype /// 0030216 // keratinocyte differentiation // inferred from sequence or structural similarity /// 0030224 // monocyte differentiation // inferred from electronic annotation /// 0030518 // intracellular steroid hormone receptor signaling pathway // inferred from direct assay /// 0030518 // intracellular steroid hormone receptor signaling pathway // inferred from sequence or structural similarity /// 0030521 // androgen receptor signaling pathway // inferred from direct assay /// 0030521 // androgen receptor signaling pathway // inferred from sequence or structural similarity /// 0031100 // organ regeneration // inferred from electronic annotation /// 0033148 // positive regulation of intracellular estrogen receptor signaling pathway // inferred from electronic annotation /// 0033160 // positive regulation of protein import into nucleus, translocation // inferred from electronic annotation /// 0033598 // mammary gland epithelial cell proliferation // inferred from electronic annotation /// 0033601 // positive regulation of mammary gland epithelial cell proliferation // inferred from electronic annotation /// 0035050 // embryonic heart tube development // inferred from electronic annotation /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0035162 // embryonic hemopoiesis // inferred from electronic annotation /// 0035357 // peroxisome proliferator activated receptor signaling pathway // inferred from electronic annotation /// 0035729 // cellular response to hepatocyte growth factor stimulus // inferred from electronic annotation /// 0035855 // megakaryocyte development // inferred from sequence or structural similarity /// 0035855 // megakaryocyte development // inferred from electronic annotation /// 0042789 // mRNA transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0042789 // mRNA transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0043010 // camera-type eye development // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from sequence or structural similarity /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045444 // fat cell differentiation // inferred from direct assay /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0045618 // positive regulation of keratinocyte differentiation // inferred from mutant phenotype /// 0045618 // positive regulation of keratinocyte differentiation // inferred from sequence or structural similarity /// 0045665 // negative regulation of neuron differentiation // inferred from sequence or structural similarity /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048821 // erythrocyte development // inferred from sequence or structural similarity /// 0048821 // erythrocyte development // inferred from electronic annotation /// 0048822 // enucleate erythrocyte development // inferred from electronic annotation /// 0051726 // regulation of cell cycle // non-traceable author statement /// 0060335 // positive regulation of interferon-gamma-mediated signaling pathway // inferred from electronic annotation /// 0060744 // mammary gland branching involved in thelarche // inferred from electronic annotation /// 0060745 // mammary gland branching involved in pregnancy // inferred from electronic annotation /// 0060750 // epithelial cell proliferation involved in mammary gland duct elongation // inferred from electronic annotation /// 0070318 // positive regulation of G0 to G1 transition // inferred from electronic annotation /// 0070371 // ERK1 and ERK2 cascade // inferred from direct assay /// 0070562 // regulation of vitamin D receptor signaling pathway // inferred from electronic annotation /// 0071364 // cellular response to epidermal growth factor stimulus // inferred from direct assay /// 0071364 // cellular response to epidermal growth factor stimulus // inferred from sequence or structural similarity /// 0071383 // cellular response to steroid hormone stimulus // inferred from direct assay /// 0097067 // cellular response to thyroid hormone stimulus // inferred from direct assay /// 2000273 // positive regulation of receptor activity // inferred from mutant phenotype /// 2000347 // positive regulation of hepatocyte proliferation // inferred from electronic annotation /// 2001141 // regulation of RNA biosynthetic process // inferred from mutant phenotype /// 2001141 // regulation of RNA biosynthetic process // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from sequence or structural similarity /// 0016592 // mediator complex // inferred from direct assay /// 0016592 // mediator complex // inferred from mutant phenotype /// 0016592 // mediator complex // inferred from electronic annotation /// 0016592 // mediator complex // inferred from sequence or structural similarity","0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from sequence or structural similarity /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0001047 // core promoter binding // inferred from direct assay /// 0001047 // core promoter binding // inferred from sequence or structural similarity /// 0001104 // RNA polymerase II transcription cofactor activity // inferred from direct assay /// 0001104 // RNA polymerase II transcription cofactor activity // inferred from electronic annotation /// 0001104 // RNA polymerase II transcription cofactor activity // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from mutant phenotype /// 0003682 // chromatin binding // inferred from sequence or structural similarity /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003712 // transcription cofactor activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0003713 // transcription coactivator activity // inferred from sequence or structural similarity /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // traceable author statement /// 0004872 // receptor activity // inferred from direct assay /// 0004872 // receptor activity // inferred from sequence or structural similarity /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0016922 // ligand-dependent nuclear receptor binding // inferred from direct assay /// 0016922 // ligand-dependent nuclear receptor binding // inferred from physical interaction /// 0030331 // estrogen receptor binding // inferred from physical interaction /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from mutant phenotype /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // non-traceable author statement /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from sequence or structural similarity /// 0030375 // thyroid hormone receptor coactivator activity // inferred from mutant phenotype /// 0032403 // protein complex binding // inferred from electronic annotation /// 0035257 // nuclear hormone receptor binding // inferred from electronic annotation /// 0036033 // mediator complex binding // inferred from direct assay /// 0042809 // vitamin D receptor binding // inferred from physical interaction /// 0042809 // vitamin D receptor binding // non-traceable author statement /// 0042809 // vitamin D receptor binding // traceable author statement /// 0042974 // retinoic acid receptor binding // inferred from physical interaction /// 0042975 // peroxisome proliferator activated receptor binding // inferred from physical interaction /// 0046966 // thyroid hormone receptor binding // inferred from direct assay /// 0046966 // thyroid hormone receptor binding // inferred from physical interaction /// 0046966 // thyroid hormone receptor binding // inferred from sequence or structural similarity /// 0050693 // LBD domain binding // inferred from physical interaction","chr17:37560539-37607539 (-) // 98.5 // q12"]
["11723517_a_at",0.25354767,0.4870119,0.32883024,-0.36923027,-0.36582422,-0.25354815,0.0019481388,0.0009492912,1.6088139,0.6859975,1.6088139,"up","CAB39L",81617,"0007050 // cell cycle arrest // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0046320 // regulation of fatty acid oxidation // traceable author statement","0005829 // cytosol // traceable author statement","","chr13:49882785-49975735 (-) // 99.35 // q14.2"]
["11752620_s_at",0.3076458,0.26148224,0.19768524,-0.29718494,-0.19768524,-0.30164433,0.0013309394,0.00036282715,1.4350581,0.5211092,1.4350581,"up","YPEL5",51646,"0055114 // oxidation-reduction process // inferred from electronic annotation","","0008113 // peptide-methionine-(S)-S-oxide reductase activity // inferred from electronic annotation","chr2:30370381-30382416 (+) // 92.44 // p23.1"]
["11723149_a_at",-0.27816486,-0.34587574,-0.22772503,0.42613316,0.42027283,0.22772503,0.0019491622,0.00095275586,-1.5604537,-0.6419655,1.5604537,"down","SLC19A2",10560,"0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015884 // folic acid transport // non-traceable author statement /// 0015888 // thiamine transport // non-traceable author statement /// 0015888 // thiamine transport // inferred from electronic annotation /// 0042723 // thiamine-containing compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0071934 // thiamine transmembrane transport // traceable author statement /// 0071934 // thiamine transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005542 // folic acid binding // inferred from electronic annotation /// 0008517 // folic acid transporter activity // non-traceable author statement /// 0008518 // reduced folate carrier activity // inferred from electronic annotation /// 0015234 // thiamine transmembrane transporter activity // traceable author statement /// 0015234 // thiamine transmembrane transporter activity // inferred from electronic annotation /// 0015403 // thiamine uptake transmembrane transporter activity // inferred from sequence or structural similarity /// 0015403 // thiamine uptake transmembrane transporter activity // inferred from electronic annotation","chr1:169432464-169455241 (-) // 96.39 // q24.2"]
["11761446_a_at",0.63688755,0.48768425,0.30784512,-0.42680836,-0.30784512,-0.44710064,0.0021605373,0.0011333051,1.8294251,0.87139034,1.8294251,"up","STAU2",27067,"0006810 // transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // traceable author statement","chr8:74333446-74659075 (-) // 96.92 // q21.11"]
["11716369_x_at",-0.25896072,-0.3063612,-0.26565838,0.3750038,0.41058922,0.25896168,0.001091852,0.00020244582,-1.5424014,-0.62517834,1.5424014,"down","SUMO2",6613,"0016925 // protein sumoylation // inferred from direct assay /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr17:73163154-73179098 (-) // 84.88 // q25.1"]
["11744118_a_at",-0.41857052,-0.37957,-0.4131508,0.43449783,0.41476917,0.37957,0.00031084043,2.2598608e-6,-1.757319,-0.81337607,1.757319,"down","MRPL10",124995,"0006412 // translation // inferred from sequence or structural similarity /// 0042254 // ribosome biogenesis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005762 // mitochondrial large ribosomal subunit // inferred from sequence or structural similarity /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from sequence or structural similarity /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from sequence or structural similarity","chr17:45900490-45908896 (-) // 80.43 // q21.32"]
["11754294_s_at",0.5847988,0.11359501,0.17202091,-0.11359501,-0.17215157,-0.15475559,0.04415295,0.042955,1.3537604,0.43697232,1.3537604,"up","STK40",83931,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr1:36805228-36811194 (-) // 90.61 // p34.3"]
["11721696_a_at",-0.28177643,-0.17584991,-0.1852951,0.22581196,0.28391933,0.17584991,0.0016431456,0.00065374386,-1.359272,-0.4428342,1.359272,"down","MRPL18",29074,"0006412 // translation // non-traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0035928 // rRNA import into mitochondrion // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005761 // mitochondrial ribosome // non-traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0008097 // 5S rRNA binding // inferred from direct assay","chr6:160210828-160220018 (+) // 95.87 // q25.3"]
["11749150_a_at",0.44956398,0.41070938,0.40392876,-0.40392876,-0.48967934,-0.52752304,0.0005783946,2.1851893e-5,1.8597531,0.8951111,1.8597531,"up","ABCD3",5825,"0006200 // ATP catabolic process // inferred from direct assay /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006635 // fatty acid beta-oxidation // inferred from genetic interaction /// 0006810 // transport // inferred from electronic annotation /// 0007031 // peroxisome organization // inferred from direct assay /// 0042221 // response to chemical stimulus // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042760 // very long-chain fatty acid catabolic process // inferred from genetic interaction /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation /// 0005778 // peroxisomal membrane // inferred from direct assay /// 0005778 // peroxisomal membrane // traceable author statement /// 0005778 // peroxisomal membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043621 // protein self-association // inferred from electronic annotation","chr1:94883968-94982836 (+) // 98.59 // p21.3"]
["11743764_a_at",-0.4749179,-0.58540916,-0.7079983,0.6166234,0.47491837,0.5183954,0.0009735221,0.00014277491,-2.18266,-1.1260874,2.18266,"down","RRBP1",6238,"0006412 // translation // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0015031 // protein transport // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // non-traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005840 // ribosome // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // non-traceable author statement /// 0030176 // integral to endoplasmic reticulum membrane // inferred from electronic annotation","0004872 // receptor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation","chr20:17594324-17662928 (-) // 97.01 // p12.1"]
["11721611_a_at",0.17451477,0.23298407,0.29504395,-0.17451477,-0.27208567,-0.27976894,0.0016042459,0.00060591026,1.3911752,0.47630405,1.3911752,"up","IPO11",51194,"0006610 // ribosomal protein import into nucleus // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0008565 // protein transporter activity // inferred from electronic annotation","chr5:61714710-61924409 (+) // 94.17 // q12.1"]
["11720421_at",0.24672794,0.35461426,0.25774574,-0.40746737,-0.43223,-0.24672794,0.0016444417,0.0006560117,1.5675423,0.6485044,1.5675423,"up","AFF4",27125,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007286 // spermatid development // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay","0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr5:132211075-132299354 (-) // 98.62 // q31.1"]
["11739813_a_at",-0.2631035,-0.24041033,-0.51667976,0.24040985,0.30229712,0.2767439,0.0036817046,0.002460812,-1.529664,-0.61321485,1.529664,"down","FZD1",8321,"0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0001944 // vasculature development // not recorded /// 0003151 // outflow tract morphogenesis // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007199 // G-protein coupled receptor signaling pathway coupled to cGMP nucleotide second messenger // not recorded /// 0007223 // Wnt receptor signaling pathway, calcium modulating pathway // not recorded /// 0007267 // cell-cell signaling // inferred from direct assay /// 0007267 // cell-cell signaling // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007409 // axonogenesis // not recorded /// 0007420 // brain development // not recorded /// 0008406 // gonad development // not recorded /// 0009790 // embryo development // not recorded /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from sequence or structural similarity /// 0030514 // negative regulation of BMP signaling pathway // not recorded /// 0030514 // negative regulation of BMP signaling pathway // inferred from electronic annotation /// 0030855 // epithelial cell differentiation // not recorded /// 0030855 // epithelial cell differentiation // inferred from electronic annotation /// 0035414 // negative regulation of catenin import into nucleus // inferred from electronic annotation /// 0035425 // autocrine signaling // inferred from direct assay /// 0042493 // response to drug // inferred from mutant phenotype /// 0044338 // canonical Wnt receptor signaling pathway involved in mesenchymal stem cell differentiation // inferred from mutant phenotype /// 0044339 // canonical Wnt receptor signaling pathway involved in osteoblast differentiation // inferred from mutant phenotype /// 0045667 // regulation of osteoblast differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0048286 // lung alveolus development // not recorded /// 0048286 // lung alveolus development // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0060022 // hard palate development // inferred from electronic annotation /// 0060070 // canonical Wnt receptor signaling pathway // inferred from direct assay /// 0060070 // canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0060412 // ventricular septum morphogenesis // inferred from electronic annotation /// 0071305 // cellular response to vitamin D // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0071375 // cellular response to peptide hormone stimulus // inferred from electronic annotation /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // not recorded /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation","0005737 // cytoplasm // not recorded /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0032589 // neuron projection membrane // not recorded /// 0045177 // apical part of cell // not recorded","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0017147 // Wnt-protein binding // inferred from physical interaction /// 0017147 // Wnt-protein binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0042813 // Wnt-activated receptor activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr7:90893754-90898519 (+) // 97.55 // q21.13"]
["11721426_at",-0.28127146,-0.2549839,-0.37304926,0.36033154,0.27431393,0.2549839,0.0011555209,0.00024123449,-1.5153433,-0.59964466,1.5153433,"down","FZD5",7855,"0000578 // embryonic axis specification // inferred from direct assay /// 0001525 // angiogenesis // not recorded /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001944 // vasculature development // inferred from electronic annotation /// 0006915 // apoptotic process // not recorded /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007409 // axonogenesis // not recorded /// 0007420 // brain development // not recorded /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008406 // gonad development // not recorded /// 0008595 // anterior/posterior axis specification, embryo // inferred from direct assay /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from sequence or structural similarity /// 0031076 // embryonic camera-type eye development // not recorded /// 0031076 // embryonic camera-type eye development // inferred from electronic annotation /// 0031077 // post-embryonic camera-type eye development // not recorded /// 0031077 // post-embryonic camera-type eye development // inferred from electronic annotation /// 0032729 // positive regulation of interferon-gamma production // inferred from mutant phenotype /// 0033077 // T cell differentiation in thymus // not recorded /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0043507 // positive regulation of JUN kinase activity // inferred from electronic annotation /// 0044332 // Wnt receptor signaling pathway involved in dorsal/ventral axis specification // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction /// 0048469 // cell maturation // inferred from electronic annotation /// 0060061 // Spemann organizer formation // inferred from direct assay /// 0060070 // canonical Wnt receptor signaling pathway // inferred from direct assay /// 0060070 // canonical Wnt receptor signaling pathway // inferred from mutant phenotype /// 0060070 // canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0060561 // apoptotic process involved in morphogenesis // inferred from electronic annotation /// 0060716 // labyrinthine layer blood vessel development // not recorded /// 0060716 // labyrinthine layer blood vessel development // inferred from electronic annotation /// 0071219 // cellular response to molecule of bacterial origin // inferred from direct assay","0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // not recorded /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042995 // cell projection // not recorded","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017147 // Wnt-protein binding // inferred from physical interaction /// 0017147 // Wnt-protein binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0030165 // PDZ domain binding // not recorded /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042813 // Wnt-activated receptor activity // not recorded /// 0042813 // Wnt-activated receptor activity // inferred by curator","chr2:208627309-208634287 (-) // 97.55 // q33.3"]
["11727732_a_at",0.33569813,0.3740754,0.36076498,-0.5530305,-0.54713106,-0.33569765,0.0012713709,0.0003214017,1.7844332,0.8354659,1.7844332,"up","LCN10","158062 /// 414332","0006810 // transport // inferred from electronic annotation /// 0007338 // single fertilization // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","","chr9:139632618-139637411 (-) // 60.86 // q34.3"]
["11719160_at",-0.15337944,-0.25434875,-0.24301147,0.15369987,0.15337944,0.1866417,0.0013107243,0.00035066067,-1.3026837,-0.3814869,1.3026837,"down","RAPH1",65059,"0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation","chr2:204298404-204400133 (-) // 94.15 // q33.2"]
["11720458_at",0.24624443,0.28931046,0.32613564,-0.24624443,-0.25395775,-0.25165367,0.0005783946,2.0512402e-5,1.4518061,0.5378488,1.4518061,"up","CAPRIN1",4076,"0017148 // negative regulation of translation // inferred from sequence or structural similarity /// 0017148 // negative regulation of translation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0050775 // positive regulation of dendrite morphogenesis // inferred from sequence or structural similarity /// 0050775 // positive regulation of dendrite morphogenesis // inferred from electronic annotation /// 0061003 // positive regulation of dendritic spine morphogenesis // inferred from sequence or structural similarity /// 0061003 // positive regulation of dendritic spine morphogenesis // inferred from electronic annotation","0000932 // cytoplasmic mRNA processing body // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0010494 // cytoplasmic stress granule // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0003723 // RNA binding // inferred from sequence or structural similarity /// 0003723 // RNA binding // inferred from electronic annotation","chr11:34073158-34125059 (+) // 88.14 // p13"]
["11750654_s_at",0.31811333,0.21969223,0.28416824,-0.21969223,-0.29702282,-0.5175085,0.0039895363,0.0027335712,1.5355254,0.61873245,1.5355254,"up","ITPR1",3708,"0001666 // response to hypoxia // inferred from direct assay /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // non-traceable author statement /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048016 // inositol phosphate-mediated signaling // inferred from sequence or structural similarity /// 0048016 // inositol phosphate-mediated signaling // traceable author statement /// 0048016 // inositol phosphate-mediated signaling // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // traceable author statement /// 0050882 // voluntary musculoskeletal movement // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // traceable author statement /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0005635 // nuclear envelope // inferred from electronic annotation /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // non-traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005955 // calcineurin complex // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016529 // sarcoplasmic reticulum // inferred from electronic annotation /// 0030667 // secretory granule membrane // inferred from electronic annotation /// 0031088 // platelet dense granule membrane // inferred from direct assay /// 0031094 // platelet dense tubular network // inferred from direct assay /// 0031095 // platelet dense tubular network membrane // traceable author statement /// 0043234 // protein complex // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005218 // intracellular ligand-gated calcium channel activity // inferred from sequence or structural similarity /// 0005218 // intracellular ligand-gated calcium channel activity // inferred from electronic annotation /// 0005220 // inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity // inferred from sequence or structural similarity /// 0005220 // inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity // traceable author statement /// 0005220 // inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015085 // calcium ion transmembrane transporter activity // traceable author statement /// 0035091 // phosphatidylinositol binding // inferred from sequence or structural similarity /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr3:4535233-4888394 (+) // 99.96 // p26.1"]
["11745724_at",-0.19557571,-0.20561981,-0.14376259,0.26049995,0.25713253,0.14376259,0.0017193909,0.0007206236,-1.3214462,-0.40211773,1.3214462,"down","LOC100507645","100507645 /// 378938","","","","chr11:65265232-65273937 (+) // 94.71 // q13.1"]
["11749792_a_at",0.47265387,0.28529978,0.15139341,-0.15139294,-0.22846985,-0.1994009,0.008041076,0.006617785,1.410497,0.4962036,1.410497,"up","PBX1",5087,"0000080 // G1 phase of mitotic cell cycle // inferred from direct assay /// 0001655 // urogenital system development // inferred from electronic annotation /// 0001658 // branching involved in ureteric bud morphogenesis // inferred from electronic annotation /// 0001779 // natural killer cell differentiation // inferred from electronic annotation /// 0002326 // B cell lineage commitment // inferred from direct assay /// 0002326 // B cell lineage commitment // non-traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007548 // sex differentiation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0009954 // proximal/distal pattern formation // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0030098 // lymphocyte differentiation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030183 // B cell differentiation // non-traceable author statement /// 0030278 // regulation of ossification // inferred from electronic annotation /// 0030325 // adrenal gland development // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030890 // positive regulation of B cell proliferation // inferred from mutant phenotype /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0033152 // immunoglobulin V(D)J recombination // inferred from direct assay /// 0033152 // immunoglobulin V(D)J recombination // inferred from electronic annotation /// 0035162 // embryonic hemopoiesis // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042692 // muscle cell differentiation // traceable author statement /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0043966 // histone H3 acetylation // inferred from electronic annotation /// 0043967 // histone H4 acetylation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from sequence or structural similarity /// 0045787 // positive regulation of cell cycle // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0048468 // cell development // inferred from electronic annotation /// 0048536 // spleen development // inferred from electronic annotation /// 0048538 // thymus development // inferred from electronic annotation /// 0048541 // Peyer's patch development // inferred from electronic annotation /// 0048568 // embryonic organ development // inferred from electronic annotation /// 0048706 // embryonic skeletal system development // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051149 // positive regulation of muscle cell differentiation // traceable author statement","0000788 // nuclear nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0031435 // mitogen-activated protein kinase kinase kinase binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043425 // bHLH transcription factor binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0046982 // protein heterodimerization activity // non-traceable author statement /// 0070491 // repressing transcription factor binding // inferred from physical interaction /// 0070644 // vitamin D response element binding // inferred from direct assay /// 0070888 // E-box binding // inferred from direct assay /// 0070888 // E-box binding // inferred from sequence or structural similarity","chr1:164669698-164854300 (+) // 84.24 // q23.3"]
["11739507_a_at",0.2726097,0.26227188,0.2769122,-0.26227188,-0.3230176,-0.39306116,0.0008566264,9.642823e-5,1.512269,0.59671485,1.512269,"up","PBX3",5090,"0002087 // regulation of respiratory gaseous exchange by neurological system process // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007387 // anterior compartment pattern formation // traceable author statement /// 0007388 // posterior compartment specification // traceable author statement /// 0007585 // respiratory gaseous exchange // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0021516 // dorsal spinal cord development // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr9:128509616-128729656 (+) // 95.5 // q33.3"]
["11720253_s_at",-0.43966484,-0.4306326,-0.29386425,0.39739513,0.6273184,0.29386425,0.0027434009,0.001628082,-1.7747058,-0.82757986,1.7747058,"down","TOB1",10140,"0008285 // negative regulation of cell proliferation // traceable author statement","","0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr17:48939583-48941412 (-) // 92.55 // q21.33"]
["11725074_a_at",0.20010567,0.30063057,0.23440456,-0.28096104,-0.31608582,-0.20010567,0.0013107243,0.00035167224,1.4248049,0.5107644,1.4248049,"up","FAM126A",84668,"0007165 // signal transduction // non-traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004871 // signal transducer activity // non-traceable author statement","chr7:22980877-23053814 (-) // 97.3 // p15.3"]
["11745724_at",-0.19557571,-0.20561981,-0.14376259,0.26049995,0.25713253,0.14376259,0.0017193909,0.0007206236,-1.3214462,-0.40211773,1.3214462,"down","MALAT1","100507645 /// 378938","","","","chr11:65265232-65273937 (+) // 94.71 // q13.1"]
["11719490_a_at",-0.31792164,-0.3474579,-0.5207405,0.3556652,0.31792164,0.37704754,0.0013035384,0.00034132274,-1.6766539,-0.74558485,1.6766539,"down","TMEM189-UBE2V1","387521 /// 387522","","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr20:48549554-48770271 (-) // 76.75 // q13.13"]
["11757141_s_at",-0.1699009,-0.22678757,-0.17999649,0.1699009,0.29947758,0.19419289,0.0016760693,0.0006815215,-1.3318381,-0.41341877,1.3318381,"down","SNORD5","100302240 /// 654320 /// 677792 /// 677805 /// 677822 /// 684959 /// 692063 /// 692072 /// 79101","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr11:93463682-93463812 (-) // 97.01 // q21"]
["11717932_at",-0.13668633,-0.21306229,-0.21720505,0.36844254,0.19833755,0.13668633,0.005976595,0.004633019,-1.3411525,-0.42347336,1.3411525,"down","TBK1",29110,"0002218 // activation of innate immune response // inferred from electronic annotation /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0009615 // response to virus // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0032606 // type I interferon production // traceable author statement /// 0032727 // positive regulation of interferon-alpha production // inferred from direct assay /// 0032728 // positive regulation of interferon-beta production // inferred from direct assay /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0045359 // positive regulation of interferon-beta biosynthetic process // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004672 // protein kinase activity // non-traceable author statement /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0051219 // phosphoprotein binding // inferred from physical interaction","chr12:64845659-64895894 (+) // 98.91 // q14.2"]
["11754288_a_at",0.29785156,0.3025751,0.2861805,-0.3630514,-0.29930878,-0.2861805,0.0005467525,1.4627974e-5,1.5280756,0.6117159,1.5280756,"up","LMAN2L",81562,"0006457 // protein folding // non-traceable author statement /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0015031 // protein transport // inferred from mutant phenotype","0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030134 // ER to Golgi transport vesicle // non-traceable author statement","0005537 // mannose binding // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:97371665-97405809 (-) // 95.48 // q11.2"]
["11757141_s_at",-0.1699009,-0.22678757,-0.17999649,0.1699009,0.29947758,0.19419289,0.0016760693,0.0006815215,-1.3318381,-0.41341877,1.3318381,"down","MIR1304","100302240 /// 654320 /// 677792 /// 677805 /// 677822 /// 684959 /// 692063 /// 692072 /// 79101","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr11:93463682-93463812 (-) // 97.01 // q21"]
["11754057_x_at",0.20356512,0.18200016,0.13485193,-0.3359275,-0.3423996,-0.13485241,0.004642051,0.0033346,1.3608729,0.44453225,1.3608729,"up","CRABP2",1382,"0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0008544 // epidermis development // traceable author statement /// 0035115 // embryonic forelimb morphogenesis // inferred from electronic annotation /// 0042573 // retinoic acid metabolic process // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation","0001972 // retinoic acid binding // inferred from electronic annotation /// 0005215 // transporter activity // inferred from electronic annotation /// 0005501 // retinoid binding // traceable author statement /// 0008289 // lipid binding // inferred from electronic annotation /// 0016918 // retinal binding // inferred from electronic annotation /// 0019841 // retinol binding // inferred from electronic annotation","chr1:156669807-156675375 (-) // 77.15 // q23.1"]
["11732376_a_at",0.32131338,0.2639246,0.2164793,-0.21647882,-0.22772074,-0.34453058,0.0014677041,0.0004813213,1.4440784,0.5301491,1.4440784,"up","TBC1D19",55296,"0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation","chr4:26585345-26756973 (+) // 98.25 // p15.2"]
["11757503_s_at",-0.26041412,-0.31672764,-0.25519753,0.3255806,0.4728546,0.25519753,0.0017193909,0.0007222325,-1.5461254,-0.62865734,1.5461254,"down","PNN",5411,"0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005882 // intermediate filament // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005911 // cell-cell junction // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030057 // desmosome // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0005198 // structural molecule activity // non-traceable author statement","chr14:39651574-39652143 (+) // 92.21 // q21.1"]
["11739747_a_at",0.22980785,0.21300936,0.18735933,-0.22599173,-0.18735886,-0.19247341,0.0005527764,1.8414587e-5,1.3305292,0.41200018,1.3305292,"up","KLHL7",55975,"0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0031463 // Cul3-RING ubiquitin ligase complex // inferred from direct assay","0042803 // protein homodimerization activity // inferred from direct assay","chr7:23145352-23215040 (+) // 98.53 // p15.3"]
["11736425_x_at",-0.23333931,-0.22303486,-0.18104696,0.18104744,0.1932602,0.35277557,0.0024599503,0.001389737,-1.3706259,-0.45483476,1.3706259,"down","STARD4",134429,"0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0030301 // cholesterol transport // inferred from electronic annotation","","0008289 // lipid binding // inferred from electronic annotation /// 0015485 // cholesterol binding // inferred from electronic annotation /// 0017127 // cholesterol transporter activity // inferred from electronic annotation","chr5:110834021-110848260 (-) // 87.16 // q22.1"]
["11715664_a_at",-0.2438612,-0.19685173,-0.25745106,0.30578327,0.19685173,0.3140602,0.0012172924,0.00027417912,-1.4190772,-0.504953,1.4190772,"down","STARD7",56910,"","0005739 // mitochondrion // inferred from electronic annotation","","chr2:96850596-96874579 (-) // 94.09 // q11.2"]
["11756328_s_at",0.24311256,0.32668114,0.3911171,-0.24311209,-0.62571526,-0.5302148,0.0043397443,0.0030408115,1.7250652,0.78665096,1.7250652,"up","TARDBP",23435,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from direct assay /// 0008380 // RNA splicing // inferred from electronic annotation /// 0043922 // negative regulation by host of viral transcription // inferred from direct assay /// 0070935 // 3'-UTR-mediated mRNA stabilization // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr1:11085096-11085548 (+) // 98.69 // p36.22"]
["11754223_at",0.24571419,0.39079762,0.292387,-0.24571419,-0.38251877,-0.30504608,0.0014257262,0.00044024363,1.5376487,0.6207259,1.5376487,"up","ZMYM6NB","100506144 /// 9204","0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0007275 // multicellular organismal development // traceable author statement /// 0022604 // regulation of cell morphogenesis // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:35447130-35450947 (-) // 70.54 // p34.3"]
["11728201_at",0.18146038,0.21782684,0.1933403,-0.18146038,-0.39646578,-0.28913593,0.0026042238,0.0015117389,1.4011031,0.4865632,1.4011031,"up","LOX",4015,"0001568 // blood vessel development // inferred from electronic annotation /// 0006464 // cellular protein modification process // traceable author statement /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0048251 // elastic fiber assembly // inferred from electronic annotation /// 0048545 // response to steroid hormone stimulus // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0004720 // protein-lysine 6-oxidase activity // inferred from electronic annotation /// 0004720 // protein-lysine 6-oxidase activity // traceable author statement /// 0005507 // copper ion binding // inferred from electronic annotation /// 0005507 // copper ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016641 // oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:121398889-121414206 (-) // 98.19 // q23.1"]
["11717384_a_at",-0.27711582,-0.30303574,-0.2417469,0.2997856,0.26601505,0.2417469,0.0005959546,2.4382294e-5,-1.4571493,-0.5431487,1.4571493,"down","RNF34",80196,"0006915 // apoptotic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:121837843-121862513 (+) // 87.27 // q24.31"]
["11719924_a_at",0.18773317,0.16034698,0.56481266,-0.20628119,-0.16034698,-0.16090012,0.02299138,0.021684377,1.3948793,0.48014036,1.3948793,"up","RBM12",10137,"0006629 // lipid metabolic process // traceable author statement /// 0016192 // vesicle-mediated transport // traceable author statement","0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0001786 // phosphatidylserine binding // inferred from direct assay /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005215 // transporter activity // traceable author statement /// 0005544 // calcium-dependent phospholipid binding // traceable author statement","chr20:34236847-34252842 (-) // 98.6 // q11.22"]
["11739250_a_at",-0.50944567,-0.2326107,-0.45187283,0.2513423,0.23261023,0.23837662,0.002764035,0.0016427081,-1.5569825,-0.63875276,1.5569825,"down","NUPL1",9818,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0010827 // regulation of glucose transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005643 // nuclear pore // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","0005487 // nucleocytoplasmic transporter activity // inferred from electronic annotation","chr13:25875665-25910478 (+) // 98.19 // q12.13"]
["11755239_a_at",-0.18892765,-0.23831463,-0.25654125,0.2097454,0.19938469,0.18892765,0.0006593511,3.4926867e-5,-1.3446964,-0.42728043,1.3446964,"down","ELL2",22936,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006368 // transcription elongation from RNA polymerase II promoter // inferred from electronic annotation /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006414 // translational elongation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0008023 // transcription elongation factor complex // inferred from electronic annotation /// 0008023 // transcription elongation factor complex // traceable author statement","0003746 // translation elongation factor activity // inferred from electronic annotation","chr5:95220803-95234353 (-) // 94.18 // q15"]
["11727526_a_at",0.57582426,0.6588259,0.27076006,-0.32586908,-0.3201418,-0.27076006,0.0037018578,0.0024846059,1.750047,0.80739367,1.750047,"up","TNNT2",7139,"0006200 // ATP catabolic process // inferred from direct assay /// 0008016 // regulation of heart contraction // inferred from mutant phenotype /// 0030049 // muscle filament sliding // inferred from direct assay /// 0030049 // muscle filament sliding // traceable author statement /// 0032780 // negative regulation of ATPase activity // inferred from direct assay /// 0032781 // positive regulation of ATPase activity // inferred from direct assay /// 0051592 // response to calcium ion // inferred from direct assay /// 0051592 // response to calcium ion // inferred from mutant phenotype /// 0055010 // ventricular cardiac muscle tissue morphogenesis // inferred from mutant phenotype","0005829 // cytosol // traceable author statement /// 0005861 // troponin complex // inferred from direct assay /// 0005865 // striated muscle thin filament // inferred from direct assay /// 0030017 // sarcomere // traceable author statement","0003779 // actin binding // inferred from direct assay /// 0005523 // tropomyosin binding // inferred from direct assay /// 0016887 // ATPase activity // inferred from direct assay /// 0030172 // troponin C binding // inferred from physical interaction /// 0031013 // troponin I binding // inferred from physical interaction","chr1:201328136-201346890 (-) // 88.23 // q32.1"]
["11736010_at",-0.1707573,-0.18546009,-0.15045738,0.24963284,0.15045738,0.4494486,0.008378251,0.006945794,-1.3680028,-0.4520712,1.3680028,"down","RSL1D1",26156,"0006412 // translation // inferred from electronic annotation /// 0032880 // regulation of protein localization // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0015934 // large ribosomal subunit // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // inferred from electronic annotation","chr16:11927703-11945442 (-) // 58.38 // p13.13"]
["11738247_a_at",0.26137066,0.26153946,0.24924421,-0.33904934,-0.24924421,-0.25168085,0.00070557836,5.5718752e-5,1.4513307,0.5373763,1.4513307,"up","TNNT1",7138,"0003009 // skeletal muscle contraction // inferred from mutant phenotype /// 0006937 // regulation of muscle contraction // inferred from electronic annotation /// 0030049 // muscle filament sliding // traceable author statement /// 0031444 // slow-twitch skeletal muscle fiber contraction // inferred from electronic annotation /// 0045932 // negative regulation of muscle contraction // inferred from direct assay","0005829 // cytosol // traceable author statement /// 0005861 // troponin complex // inferred from direct assay /// 0005861 // troponin complex // inferred from mutant phenotype /// 0005861 // troponin complex // inferred from electronic annotation","0005523 // tropomyosin binding // inferred from mutant phenotype /// 0031014 // troponin T binding // inferred from electronic annotation","chr19:55644161-55660606 (-) // 98.49 // q13.42"]
["11747966_a_at",0.1938076,0.28972578,0.36021614,-0.27685452,-0.1938076,-0.2254734,0.0016760693,0.00068151776,1.4273064,0.51329505,1.4273064,"up","SKIDA1",387640,"","0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation","chr10:21803944-21814611 (-) // 96.06 // p12.31"]
["11736118_a_at",-0.35222006,-0.29411602,-0.291471,0.36068106,0.291471,0.3900571,0.0006943628,4.8243663e-5,-1.5800886,-0.66000545,1.5800886,"down","ZFAND5",7763,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0001944 // vasculature development // inferred from electronic annotation /// 0003016 // respiratory system process // inferred from electronic annotation /// 0010761 // fibroblast migration // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0048745 // smooth muscle tissue development // inferred from electronic annotation /// 0060324 // face development // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:74966340-74980386 (-) // 86.52 // q21.13"]
["11744833_at",0.35879135,0.46134663,0.33876324,-0.33876276,-0.46537876,-0.40441465,0.0008976833,0.00011592113,1.728059,0.7891525,1.728059,"up","TSHZ2",128553,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:52104711-52107602 (+) // 88.44 // q13.2"]
["11754931_a_at",-0.17396736,-0.25833893,-0.20592308,0.17396736,0.31614685,0.19428253,0.001961328,0.0009667417,-1.3574277,-0.44087535,1.3574277,"down","GCLC",2729,"0000096 // sulfur amino acid metabolic process // traceable author statement /// 0006534 // cysteine metabolic process // inferred from direct assay /// 0006536 // glutamate metabolic process // inferred from direct assay /// 0006749 // glutathione metabolic process // inferred from electronic annotation /// 0006750 // glutathione biosynthetic process // inferred from direct assay /// 0006750 // glutathione biosynthetic process // inferred from electronic annotation /// 0006750 // glutathione biosynthetic process // inferred from mutant phenotype /// 0006750 // glutathione biosynthetic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0006916 // anti-apoptosis // inferred from direct assay /// 0006979 // response to oxidative stress // inferred from direct assay /// 0009408 // response to heat // inferred from direct assay /// 0009410 // response to xenobiotic stimulus // inferred from electronic annotation /// 0009725 // response to hormone stimulus // inferred from direct assay /// 0019852 // L-ascorbic acid metabolic process // inferred from electronic annotation /// 0031397 // negative regulation of protein ubiquitination // inferred from electronic annotation /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045454 // cell redox homeostasis // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0046685 // response to arsenic-containing substance // inferred from electronic annotation /// 0050880 // regulation of blood vessel size // inferred from mutant phenotype /// 0051409 // response to nitrosative stress // inferred from electronic annotation /// 0051900 // regulation of mitochondrial depolarization // inferred from electronic annotation","0005737 // cytoplasm // not recorded /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0017109 // glutamate-cysteine ligase complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0004357 // glutamate-cysteine ligase activity // inferred from direct assay /// 0004357 // glutamate-cysteine ligase activity // inferred from mutant phenotype /// 0004357 // glutamate-cysteine ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016595 // glutamate binding // inferred from direct assay /// 0016874 // ligase activity // inferred from electronic annotation /// 0043531 // ADP binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0050662 // coenzyme binding // inferred from physical interaction","chr6:53362141-53375703 (-) // 91.43 // p12.1"]
["11720993_at",0.2113204,0.35035276,0.30008602,-0.21892118,-0.28184724,-0.2113204,0.0013107243,0.00034832067,1.4385506,0.524616,1.4385506,"up","SOX2",6657,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0001649 // osteoblast differentiation // inferred from direct assay /// 0001654 // eye development // inferred from expression pattern /// 0001714 // endodermal cell fate specification // inferred from direct assay /// 0006325 // chromatin organization // non-traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0009611 // response to wounding // inferred from expression pattern /// 0010468 // regulation of gene expression // inferred from mutant phenotype /// 0021781 // glial cell fate commitment // non-traceable author statement /// 0021983 // pituitary gland development // inferred from expression pattern /// 0030900 // forebrain development // inferred from expression pattern /// 0035019 // somatic stem cell maintenance // inferred from direct assay /// 0035019 // somatic stem cell maintenance // inferred from mutant phenotype /// 0043281 // regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043410 // positive regulation of MAPK cascade // inferred from direct assay /// 0045665 // negative regulation of neuron differentiation // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048839 // inner ear development // inferred from expression pattern /// 0050680 // negative regulation of epithelial cell proliferation // inferred from direct assay /// 0070848 // response to growth factor stimulus // inferred from direct assay /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from direct assay /// 0097150 // neuronal stem cell maintenance // inferred from sequence or structural similarity","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0035198 // miRNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay","chr3:181429702-181432221 (+) // 95.04 // q26.33"]
["11716073_a_at",0.22988224,0.15008163,0.16070843,-0.15008163,-0.21436977,-0.2485466,0.0015485154,0.0005475156,1.3054587,0.38455677,1.3054587,"up","ATP6V1B2",526,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // traceable author statement /// 0015992 // proton transport // inferred from electronic annotation /// 0033572 // transferrin transport // traceable author statement /// 0046034 // ATP metabolic process // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005902 // microvillus // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016469 // proton-transporting two-sector ATPase complex // inferred from electronic annotation /// 0033178 // proton-transporting two-sector ATPase complex, catalytic domain // inferred from electronic annotation /// 0033180 // proton-transporting V-type ATPase, V1 domain // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005524 // ATP binding // inferred from electronic annotation /// 0015078 // hydrogen ion transmembrane transporter activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism // inferred from electronic annotation /// 0046961 // proton-transporting ATPase activity, rotational mechanism // inferred from electronic annotation /// 0046961 // proton-transporting ATPase activity, rotational mechanism // traceable author statement","chr8:20054560-20079207 (+) // 94.64 // p21.3"]
["11725820_s_at",-0.18344355,-0.38182068,-0.30625963,0.27665186,0.27036142,0.18344355,0.002252896,0.0012079482,-1.4479316,-0.53399354,1.4479316,"down","PAQR3",152559,"","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr4:79839093-79860581 (-) // 96.75 // q21.21"]
["11741807_a_at",-0.388484,-0.48270035,-0.5292263,0.5367689,0.40824223,0.388484,0.0009366118,0.00012665638,-1.8807421,-0.911302,1.8807421,"down","CMPK1",51727,"0006139 // nucleobase-containing compound metabolic process // inferred from electronic annotation /// 0006221 // pyrimidine nucleotide biosynthetic process // inferred from electronic annotation /// 0006222 // UMP biosynthetic process // traceable author statement /// 0009220 // pyrimidine ribonucleotide biosynthetic process // traceable author statement /// 0015949 // nucleobase-containing small molecule interconversion // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046939 // nucleotide phosphorylation // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004127 // cytidylate kinase activity // inferred from electronic annotation /// 0004849 // uridine kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016776 // phosphotransferase activity, phosphate group as acceptor // inferred from electronic annotation /// 0019201 // nucleotide kinase activity // inferred from electronic annotation /// 0019205 // nucleobase-containing compound kinase activity // inferred from electronic annotation","chr1:47799468-47844510 (+) // 95.23 // p33"]
["11724748_at",0.22623634,0.13869,0.18109703,-0.25063515,-0.13869,-0.31982136,0.003205884,0.0020240422,1.3364353,0.41838998,1.3364353,"up","CHMP2B",25978,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0016197 // endosomal transport // traceable author statement","0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","0019904 // protein domain specific binding // inferred from physical interaction","chr3:87276412-87304697 (+) // 96.19 // p11.2"]
["11720043_a_at",-0.36314106,-0.13594532,-0.16098118,0.13594532,0.19219685,0.17210674,0.0077620237,0.0063312976,-1.3074648,-0.38677216,1.3074648,"down","ABHD16A","79136 /// 7920","","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016787 // hydrolase activity // inferred from electronic annotation","chr6:31654734-31671221 (-) // 98.59 // p21.33"]
["11726006_at",-0.20005512,-0.19969368,-0.23531246,0.19969368,0.26638794,0.2168045,0.0006943628,4.602626e-5,-1.3559611,-0.4393158,1.3559611,"down","SLC30A1",7779,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006829 // zinc ion transport // inferred from sequence or structural similarity /// 0006829 // zinc ion transport // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from sequence or structural similarity /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0006882 // cellular zinc ion homeostasis // inferred from sequence or structural similarity /// 0006882 // cellular zinc ion homeostasis // inferred from electronic annotation /// 0046929 // negative regulation of neurotransmitter secretion // inferred from sequence or structural similarity /// 0046929 // negative regulation of neurotransmitter secretion // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070509 // calcium ion import // inferred from electronic annotation /// 0070574 // cadmium ion transmembrane transport // inferred from sequence or structural similarity /// 0070574 // cadmium ion transmembrane transport // inferred from electronic annotation /// 0071577 // zinc ion transmembrane transport // inferred from electronic annotation /// 0071584 // negative regulation of zinc ion import // inferred from sequence or structural similarity /// 0071584 // negative regulation of zinc ion import // inferred from electronic annotation /// 0071585 // detoxification of cadmium ion // inferred from electronic annotation /// 0090281 // negative regulation of calcium ion import // inferred from sequence or structural similarity /// 0090281 // negative regulation of calcium ion import // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030315 // T-tubule // inferred from sequence or structural similarity /// 0030315 // T-tubule // inferred from electronic annotation","0005385 // zinc ion transmembrane transporter activity // inferred from electronic annotation /// 0008324 // cation transmembrane transporter activity // inferred from electronic annotation /// 0019855 // calcium channel inhibitor activity // inferred from sequence or structural similarity /// 0019855 // calcium channel inhibitor activity // inferred from electronic annotation","chr1:211744909-211752099 (-) // 98.55 // q32.3"]
["11727263_a_at",0.1956625,0.23578978,0.28255177,-0.19566202,-0.40422297,-0.24142599,0.0027023053,0.001596711,1.4324039,0.51843834,1.4324039,"up","ENTPD7",57089,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0016787 // hydrolase activity // inferred from electronic annotation","chr10:101419133-101471002 (+) // 90.17 // q24.2"]
["11744737_a_at",0.41410923,0.23443604,0.27340698,-0.23443651,-0.35386133,-0.32618856,0.0017212598,0.00072661455,1.5285314,0.6121462,1.5285314,"up","RTKN2",219790,"0007165 // signal transduction // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation","chr10:63997910-64028622 (-) // 93.69 // q21.2"]
["11726320_at",0.2061534,0.16263771,0.2003479,-0.41259098,-0.16263771,-0.1779437,0.007187407,0.0057944986,1.357329,0.44077048,1.357329,"up","ERO1L",30001,"0006457 // protein folding // traceable author statement /// 0006457 // protein folding // inferred from electronic annotation /// 0006464 // cellular protein modification process // traceable author statement /// 0006467 // protein thiol-disulfide exchange // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0009266 // response to temperature stimulus // traceable author statement /// 0022900 // electron transport chain // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // inferred from electronic annotation /// 0050873 // brown fat cell differentiation // inferred from electronic annotation /// 0051085 // chaperone mediated protein folding requiring cofactor // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0016491 // oxidoreductase activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016671 // oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation","chr14:53108162-53162687 (-) // 77.92 // q22.1"]
["11723688_at",0.27605915,0.2530899,0.21478081,-0.21812773,-0.28522444,-0.21478128,0.00077045785,7.432496e-5,1.4018718,0.48735443,1.4018718,"up","CREBL2",1389,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from sequence or structural similarity /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from electronic annotation /// 0045600 // positive regulation of fat cell differentiation // inferred from sequence or structural similarity /// 0045600 // positive regulation of fat cell differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0046326 // positive regulation of glucose import // inferred from sequence or structural similarity /// 0046326 // positive regulation of glucose import // inferred from electronic annotation /// 0046889 // positive regulation of lipid biosynthetic process // inferred from sequence or structural similarity /// 0046889 // positive regulation of lipid biosynthetic process // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from sequence or structural similarity /// 0050821 // protein stabilization // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr12:12764766-12798131 (+) // 96.19 // p13.2"]
["11718974_at",-0.13998699,-0.21348667,-0.22679329,0.2651968,0.1953497,0.13998699,0.0019518846,0.00095576775,-1.3136675,-0.39360017,1.3136675,"down","LPL",4023,"0006629 // lipid metabolic process // traceable author statement /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred by curator /// 0006633 // fatty acid biosynthetic process // inferred from direct assay /// 0006633 // fatty acid biosynthetic process // inferred from sequence or structural similarity /// 0006641 // triglyceride metabolic process // inferred from sequence or structural similarity /// 0006644 // phospholipid metabolic process // inferred from sequence or structural similarity /// 0010744 // positive regulation of macrophage derived foam cell differentiation // inferred by curator /// 0010744 // positive regulation of macrophage derived foam cell differentiation // inferred from electronic annotation /// 0010886 // positive regulation of cholesterol storage // inferred from mutant phenotype /// 0010890 // positive regulation of sequestering of triglyceride // inferred from mutant phenotype /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0019432 // triglyceride biosynthetic process // inferred from electronic annotation /// 0019433 // triglyceride catabolic process // inferred from direct assay /// 0019433 // triglyceride catabolic process // inferred from sequence or structural similarity /// 0019433 // triglyceride catabolic process // inferred from electronic annotation /// 0034371 // chylomicron remodeling // inferred by curator /// 0034372 // very-low-density lipoprotein particle remodeling // inferred from direct assay /// 0034372 // very-low-density lipoprotein particle remodeling // inferred from sequence or structural similarity /// 0042157 // lipoprotein metabolic process // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0070328 // triglyceride homeostasis // inferred from genetic interaction","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation /// 0034361 // very-low-density lipoprotein particle // inferred from electronic annotation /// 0042627 // chylomicron // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004465 // lipoprotein lipase activity // inferred from direct assay /// 0004465 // lipoprotein lipase activity // inferred from sequence or structural similarity /// 0004465 // lipoprotein lipase activity // inferred from electronic annotation /// 0004620 // phospholipase activity // inferred from sequence or structural similarity /// 0004806 // triglyceride lipase activity // inferred from direct assay /// 0004806 // triglyceride lipase activity // inferred from sequence or structural similarity /// 0004806 // triglyceride lipase activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from direct assay /// 0008201 // heparin binding // inferred from electronic annotation /// 0008201 // heparin binding // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017129 // triglyceride binding // inferred from electronic annotation","chr8:19796283-19824770 (+) // 98.32 // p21.3"]
["11724848_a_at",-0.3102765,-0.5812092,-0.4537673,0.41036272,0.42787075,0.31027603,0.0016431456,0.00065273716,-1.7792313,-0.8312541,1.7792313,"down","DIXDC1",85458,"0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0021695 // cerebellar cortex development // not recorded /// 0021795 // cerebral cortex cell migration // inferred from electronic annotation /// 0021799 // cerebral cortex radially oriented cell migration // inferred from electronic annotation /// 0021846 // cell proliferation in forebrain // inferred from electronic annotation /// 0021869 // forebrain ventricular zone progenitor cell division // inferred from electronic annotation /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0030900 // forebrain development // not recorded /// 0032956 // regulation of actin cytoskeleton organization // inferred from electronic annotation /// 0043010 // camera-type eye development // not recorded /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0046328 // regulation of JNK cascade // not recorded /// 0050772 // positive regulation of axonogenesis // not recorded /// 0060070 // canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0060071 // Wnt receptor signaling pathway, planar cell polarity pathway // not recorded /// 0070507 // regulation of microtubule cytoskeleton organization // inferred from electronic annotation /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0005938 // cell cortex // not recorded /// 0030054 // cell junction // inferred from electronic annotation /// 0043025 // neuronal cell body // not recorded /// 0043679 // axon terminus // not recorded","0003779 // actin binding // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0031435 // mitogen-activated protein kinase kinase kinase binding // not recorded /// 0043015 // gamma-tubulin binding // inferred from direct assay","chr11:111807926-111893374 (+) // 93.97 // q23.1"]
["11738986_a_at",0.17976665,0.28412247,0.2005024,-0.31540298,-0.3443222,-0.17976665,0.0021367685,0.0011162361,1.415483,0.50129443,1.415483,"up","GABARAPL1",23710,"","0005622 // intracellular // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005776 // autophagic vacuole // inferred from direct assay /// 0005776 // autophagic vacuole // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032590 // dendrite membrane // inferred from electronic annotation /// 0032839 // dendrite cytoplasm // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0048487 // beta-tubulin binding // inferred from sequence or structural similarity /// 0050811 // GABA receptor binding // inferred from sequence or structural similarity","chr12:10365107-10375731 (+) // 93.79 // p13.2"]
["11757141_s_at",-0.1699009,-0.22678757,-0.17999649,0.1699009,0.29947758,0.19419289,0.0016760693,0.0006815215,-1.3318381,-0.41341877,1.3318381,"down","SNORA1","100302240 /// 654320 /// 677792 /// 677805 /// 677822 /// 684959 /// 692063 /// 692072 /// 79101","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr11:93463682-93463812 (-) // 97.01 // q21"]
["11755281_a_at",0.3382969,0.1703062,0.21272182,-0.1703062,-0.21583843,-0.19461346,0.0021648712,0.0011365107,1.351,0.43402767,1.351,"up","LOC100652886","100652886 /// 100653157 /// 7045","0001525 // angiogenesis // inferred from expression pattern /// 0002062 // chondrocyte differentiation // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007162 // negative regulation of cell adhesion // traceable author statement /// 0007601 // visual perception // inferred from electronic annotation /// 0007601 // visual perception // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity","0005178 // integrin binding // traceable author statement /// 0050840 // extracellular matrix binding // inferred from electronic annotation","chr5:135364675-135399097 (+) // 92.98 // q31.1"]
["11753976_a_at",0.20370388,0.2615943,0.19458914,-0.19458914,-0.35772276,-0.2979493,0.0016301863,0.0006402799,1.4175335,0.50338286,1.4175335,"up","ZMYM3",9203,"0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0007275 // multicellular organismal development // traceable author statement /// 0022604 // regulation of cell morphogenesis // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:70469056-70474055 (-) // 91.51 // q13.1"]
["11754223_at",0.24571419,0.39079762,0.292387,-0.24571419,-0.38251877,-0.30504608,0.0014257262,0.00044024363,1.5376487,0.6207259,1.5376487,"up","ZMYM6","100506144 /// 9204","0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0007275 // multicellular organismal development // traceable author statement /// 0022604 // regulation of cell morphogenesis // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:35447130-35450947 (-) // 70.54 // p34.3"]
["11726583_s_at",-0.17529011,-0.1900711,-0.24507713,0.17529011,0.20292282,0.18378639,0.00073790376,6.737106e-5,-1.3111317,-0.39081258,1.3111317,"down","CKAP4",10970,"","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005811 // lipid particle // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","","chr12:106631652-106641766 (-) // 92.08 // q23.3"]
["11733239_x_at",0.2648449,0.28094006,0.28665638,-0.40263462,-0.2648449,-0.46358776,0.001350818,0.00037923772,1.5740734,0.65450287,1.5740734,"up","RPGRIP1L",23322,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008589 // regulation of smoothened signaling pathway // inferred from electronic annotation /// 0021532 // neural tube patterning // inferred from electronic annotation /// 0021537 // telencephalon development // inferred from electronic annotation /// 0021549 // cerebellum development // inferred from electronic annotation /// 0021670 // lateral ventricle development // inferred from electronic annotation /// 0021772 // olfactory bulb development // inferred from electronic annotation /// 0022038 // corpus callosum development // inferred from electronic annotation /// 0035108 // limb morphogenesis // inferred from electronic annotation /// 0035115 // embryonic forelimb morphogenesis // inferred from electronic annotation /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from electronic annotation /// 0043010 // camera-type eye development // inferred from electronic annotation /// 0043584 // nose development // inferred from electronic annotation /// 0045744 // negative regulation of G-protein coupled receptor protein signaling pathway // inferred from direct assay /// 0060039 // pericardium development // inferred from electronic annotation /// 0060322 // head development // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0005923 // tight junction // inferred from electronic annotation /// 0005929 // cilium // inferred from direct assay /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from direct assay /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0035085 // cilium axoneme // inferred from direct assay /// 0035085 // cilium axoneme // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0031870 // thromboxane A2 receptor binding // inferred from physical interaction","chr16:53633817-53737742 (-) // 96.81 // q12.2"]
["11726561_at",-0.4364276,-0.42897558,-0.32873106,0.35881662,0.34209347,0.32873106,0.0006217929,3.2134e-5,-1.6716334,-0.74125844,1.6716334,"down","SAP18",10284,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement","0000118 // histone deacetylase complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr13:21714249-21723223 (+) // 92.69 // q12.11"]
["11751455_a_at",0.46157122,0.2787838,0.142344,-0.17435098,-0.14303637,-0.142344,0.010089653,0.008600233,1.3636532,0.44747677,1.3636532,"up","REEP1",65055,"0008219 // cell death // inferred from electronic annotation /// 0051205 // protein insertion into membrane // inferred from direct assay /// 0071786 // endoplasmic reticulum tubular network organization // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from direct assay /// 0031849 // olfactory receptor binding // inferred from mutant phenotype","chr2:86443503-86564749 (-) // 93.77 // p11.2"]
["11754241_a_at",0.19215298,0.23066616,0.28679943,-0.19215298,-0.27553654,-0.29052544,0.0012233602,0.00028594438,1.4037421,0.48927784,1.4037421,"up","ATAD1",84896,"0002092 // positive regulation of receptor internalization // inferred from sequence or structural similarity /// 0002092 // positive regulation of receptor internalization // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from sequence or structural similarity /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0007612 // learning // inferred from sequence or structural similarity /// 0007612 // learning // inferred from electronic annotation /// 0007613 // memory // inferred from sequence or structural similarity /// 0007613 // memory // inferred from electronic annotation /// 0051967 // negative regulation of synaptic transmission, glutamatergic // inferred from sequence or structural similarity /// 0051967 // negative regulation of synaptic transmission, glutamatergic // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005777 // peroxisome // inferred from electronic annotation /// 0005778 // peroxisomal membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from sequence or structural similarity /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from sequence or structural similarity /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr10:89512873-89574639 (-) // 93.11 // q23.31"]
["11735623_a_at",0.4099331,0.23481369,0.30624056,-0.23481369,-0.26865864,-0.34683323,0.0015865989,0.0005862627,1.5161694,0.60043097,1.5161694,"up","PSMB9",5698,"0000075 // cell cycle checkpoint // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from electronic annotation","0000502 // proteasome complex // traceable author statement /// 0000502 // proteasome complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005839 // proteasome core complex // inferred from electronic annotation","0004175 // endopeptidase activity // inferred from electronic annotation /// 0004298 // threonine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr6:32821937-32827628 (+) // 99.71 // p21.32"]
["11757004_a_at",0.12732792,0.17025328,0.17438412,-0.24433088,-0.3450818,-0.12732744,0.0049238633,0.003599627,1.316069,0.39623514,1.316069,"up","KCTD10",83892,"0016567 // protein ubiquitination // inferred from sequence or structural similarity /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0051260 // protein homooligomerization // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0031463 // Cul3-RING ubiquitin ligase complex // inferred from sequence or structural similarity","0004842 // ubiquitin-protein ligase activity // inferred from sequence or structural similarity /// 0005216 // ion channel activity // inferred from electronic annotation","chr12:109889208-109898611 (-) // 89.03 // q24.11"]
["11716179_at",0.6166811,0.35533142,0.40103245,-0.35533142,-0.5381355,-0.48563862,0.0017035499,0.00070264086,1.8886869,0.91738355,1.8886869,"up","C5orf15",56951,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr5:133291197-133304478 (-) // 96.25 // q31.1"]
["11745998_at",0.33857727,0.25392437,0.36558294,-0.27941656,-0.2539239,-0.26454782,0.0007449905,7.026396e-5,1.5003762,0.5853243,1.5003762,"up","ZNF252P",286101,"","0005622 // intracellular // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation","chr8:146198974-146225155 (-) // 86.83 // q24.3"]
["11743151_a_at",0.57539415,0.26514435,0.26281023,-0.3179865,-0.37045622,-0.2628107,0.0045107757,0.0032061748,1.6075542,0.6848674,1.6075542,"up","GLS",2744,"0002087 // regulation of respiratory gaseous exchange by neurological system process // inferred from electronic annotation /// 0006537 // glutamate biosynthetic process // inferred from direct assay /// 0006537 // glutamate biosynthetic process // traceable author statement /// 0006541 // glutamine metabolic process // inferred from electronic annotation /// 0006543 // glutamine catabolic process // inferred from direct assay /// 0006543 // glutamine catabolic process // non-traceable author statement /// 0006543 // glutamine catabolic process // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007269 // neurotransmitter secretion // traceable author statement /// 0007610 // behavior // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // traceable author statement /// 0014047 // glutamate secretion // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051289 // protein homotetramerization // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0004359 // glutaminase activity // inferred from direct assay /// 0004359 // glutaminase activity // non-traceable author statement /// 0004359 // glutaminase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr2:191745546-191830278 (+) // 96.04 // q32.2"]
["11757141_s_at",-0.1699009,-0.22678757,-0.17999649,0.1699009,0.29947758,0.19419289,0.0016760693,0.0006815215,-1.3318381,-0.41341877,1.3318381,"down","SNORA8","100302240 /// 654320 /// 677792 /// 677805 /// 677822 /// 684959 /// 692063 /// 692072 /// 79101","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr11:93463682-93463812 (-) // 97.01 // q21"]
["11758157_s_at",-0.47362804,-0.34535027,-0.42543793,0.34535027,0.44492245,0.4180088,0.00073960464,6.848191e-5,-1.76243,-0.8175659,1.76243,"down","COQ10B",80219,"","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","","chr2:198339542-198339850 (+) // 94.81 // q33.1"]
["11722853_a_at",0.1650114,0.13534498,0.13775206,-0.13534498,-0.28934717,-0.34942245,0.004610877,0.0033042633,1.3232396,0.40407434,1.3232396,"up","HABP4",22927,"0002576 // platelet degranulation // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0043392 // negative regulation of DNA binding // inferred from direct assay /// 0071260 // cellular response to mechanical stimulus // inferred from sequence or structural similarity","0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0030017 // sarcomere // inferred from sequence or structural similarity","0005515 // protein binding // inferred from physical interaction","chr9:99212413-99253618 (+) // 87.69 // q22.32"]
["11745608_a_at",0.20246887,0.40170097,0.30588055,-0.20246887,-0.2050848,-0.2050848,0.0019180408,0.00091111066,1.4216467,0.50756294,1.4216467,"up","WDR1",9948,"0002576 // platelet degranulation // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007605 // sensory perception of sound // traceable author statement /// 0030168 // platelet activation // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation","chr4:10075962-10100761 (-) // 66.45 // p16.1"]
["11725877_a_at",0.4439535,0.27532196,0.24494839,-0.3017063,-0.36667728,-0.24494839,0.0019320704,0.00092334545,1.5431218,0.6258519,1.5431218,"up","SCARA3",51435,"0006979 // response to oxidative stress // traceable author statement /// 0009650 // UV protection // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005044 // scavenger receptor activity // traceable author statement","chr8:27491384-27517058 (+) // 83.39 // p21.1"]
["11718878_a_at",0.15945292,0.15945292,0.18251848,-0.15945292,-0.28409815,-0.38246918,0.0036513812,0.002431109,1.3589398,0.44248152,1.3589398,"up","SMC1A",8243,"0000070 // mitotic sister chromatid segregation // traceable author statement /// 0000075 // cell cycle checkpoint // inferred from direct assay /// 0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007052 // mitotic spindle organization // traceable author statement /// 0007062 // sister chromatid cohesion // inferred from mutant phenotype /// 0007062 // sister chromatid cohesion // inferred from electronic annotation /// 0007064 // mitotic sister chromatid cohesion // traceable author statement /// 0007067 // mitosis // inferred from electronic annotation /// 0007091 // mitotic metaphase/anaphase transition // traceable author statement /// 0007126 // meiosis // inferred from sequence or structural similarity /// 0007126 // meiosis // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0009314 // response to radiation // inferred from expression pattern /// 0010467 // gene expression // traceable author statement /// 0030261 // chromosome condensation // inferred from electronic annotation /// 0032876 // negative regulation of DNA endoreduplication // inferred from mutant phenotype /// 0042770 // signal transduction in response to DNA damage // inferred from direct assay /// 0051276 // chromosome organization // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0000794 // condensed nuclear chromosome // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0008280 // cohesin core heterodimer // traceable author statement /// 0030893 // meiotic cohesin complex // inferred from direct assay /// 0030893 // meiotic cohesin complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0003777 // microtubule motor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from physical interaction","chrX:53401069-53449677 (-) // 72.9 // p11.22"]
["11739305_a_at",0.37839317,0.3139,0.30292988,-0.30292988,-0.47769547,-0.42056656,0.0010930966,0.00020572059,1.6610992,0.7321383,1.6610992,"up","WRB",7485,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr21:40752212-40769814 (+) // 99.43 // q22.2"]
["11738060_s_at",0.28587437,0.22888947,0.19921875,-0.24988079,-0.19921875,-0.43047953,0.0032469141,0.0020611333,1.4451178,0.5311872,1.4451178,"up","HIST4H4","121504 /// 554313 /// 8294 /// 8359 /// 8360 /// 8361 /// 8362 /// 8363 /// 8364 /// 8365 /// 8366 /// 8367 /// 8368 /// 8370","0000723 // telomere maintenance // traceable author statement /// 0006325 // chromatin organization // non-traceable author statement /// 0006334 // nucleosome assembly // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0045653 // negative regulation of megakaryocyte differentiation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement","0000786 // nucleosome // traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26285354-26285727 (-) // 99.47 // p22.2"]
["11763837_s_at",-0.34909678,-0.17077255,-0.2585926,0.20092106,0.17077255,0.27421665,0.0024523602,0.001375309,-1.3897166,-0.47479072,1.3897166,"down","UTY",7404,"0016568 // chromatin modification // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrY:15362895-15471104 (-) // 91.53 // q11.221"]
["11757141_s_at",-0.1699009,-0.22678757,-0.17999649,0.1699009,0.29947758,0.19419289,0.0016760693,0.0006815215,-1.3318381,-0.41341877,1.3318381,"down","SNORA18","100302240 /// 654320 /// 677792 /// 677805 /// 677822 /// 684959 /// 692063 /// 692072 /// 79101","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr11:93463682-93463812 (-) // 97.01 // q21"]
["11739963_x_at",-0.11073637,-0.0797143,-0.13272047,0.5401511,0.27750444,0.0797143,0.039920427,0.038751353,-1.3257852,-0.406847,1.3257852,"down","FDXACB1",91893,"0006432 // phenylalanyl-tRNA aminoacylation // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from electronic annotation","","0000049 // tRNA binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004826 // phenylalanine-tRNA ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation","chr11:111744781-111750217 (-) // 88.2 // q23.1"]
["11738060_s_at",0.28587437,0.22888947,0.19921875,-0.24988079,-0.19921875,-0.43047953,0.0032469141,0.0020611333,1.4451178,0.5311872,1.4451178,"up","HIST2H4A","121504 /// 554313 /// 8294 /// 8359 /// 8360 /// 8361 /// 8362 /// 8363 /// 8364 /// 8365 /// 8366 /// 8367 /// 8368 /// 8370","0000723 // telomere maintenance // traceable author statement /// 0006325 // chromatin organization // non-traceable author statement /// 0006334 // nucleosome assembly // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0045653 // negative regulation of megakaryocyte differentiation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement","0000786 // nucleosome // traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26285354-26285727 (-) // 99.47 // p22.2"]
["11738060_s_at",0.28587437,0.22888947,0.19921875,-0.24988079,-0.19921875,-0.43047953,0.0032469141,0.0020611333,1.4451178,0.5311872,1.4451178,"up","HIST2H4B","121504 /// 554313 /// 8294 /// 8359 /// 8360 /// 8361 /// 8362 /// 8363 /// 8364 /// 8365 /// 8366 /// 8367 /// 8368 /// 8370","0000723 // telomere maintenance // traceable author statement /// 0006325 // chromatin organization // non-traceable author statement /// 0006334 // nucleosome assembly // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0045653 // negative regulation of megakaryocyte differentiation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement","0000786 // nucleosome // traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26285354-26285727 (-) // 99.47 // p22.2"]
["11733642_s_at",0.32876682,0.41815758,0.40505219,-0.4455142,-0.45995855,-0.32876778,0.00084399927,9.139398e-5,1.7355654,0.79540575,1.7355654,"up","NECAP2",55707,"0006810 // transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from sequence or structural similarity /// 0006897 // endocytosis // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005622 // intracellular // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005905 // coated pit // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0030125 // clathrin vesicle coat // inferred from sequence or structural similarity /// 0030665 // clathrin coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","","chr1:16767166-16786582 (+) // 96.04 // p36.13"]
["11743495_s_at",0.5253959,0.3771615,0.41847658,-0.5649519,-0.47726154,-0.3771615,0.001091852,0.00019854578,1.8835701,0.9134697,1.8835701,"up","SV2B",9899,"0006810 // transport // inferred from electronic annotation /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0001669 // acrosomal vesicle // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0022857 // transmembrane transporter activity // inferred from electronic annotation","chr15:91643544-91838650 (+) // 97.85 // q26.1"]
["11739191_at",0.23890448,0.1455164,0.18861914,-0.27894735,-0.47711372,-0.1455164,0.009432929,0.007966396,1.405944,0.49153915,1.405944,"up","AKT3",10000,"0000002 // mitochondrial genome maintenance // inferred from mutant phenotype /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype /// 0007165 // signal transduction // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr1:243663025-244006553 (-) // 99.05 // q43"]
["11752854_a_at",0.49179506,0.183146,0.35957718,-0.257133,-0.21519995,-0.183146,0.004920457,0.0035939254,1.4776785,0.56333244,1.4776785,"up","PIGA",5277,"0006501 // C-terminal protein lipidation // traceable author statement /// 0006506 // GPI anchor biosynthetic process // traceable author statement /// 0006506 // GPI anchor biosynthetic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009893 // positive regulation of metabolic process // traceable author statement /// 0016254 // preassembly of GPI anchor in ER membrane // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0000506 // glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008194 // UDP-glycosyltransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0017176 // phosphatidylinositol N-acetylglucosaminyltransferase activity // traceable author statement /// 0017176 // phosphatidylinositol N-acetylglucosaminyltransferase activity // inferred from electronic annotation","chrX:15339822-15350115 (-) // 98.53 // p22.2"]
["11747534_a_at",0.38579082,0.19629383,0.23342419,-0.20219421,-0.2352171,-0.19629383,0.0022685104,0.0012299977,1.397716,0.48307133,1.397716,"up","RSU1",6251,"0007165 // signal transduction // traceable author statement /// 0007265 // Ras protein signal transduction // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement","0005829 // cytosol // traceable author statement","","chr10:16634912-16859450 (-) // 98.42 // p13"]
["11734772_a_at",0.1614399,0.2592678,0.22867203,-0.50227976,-0.1614399,-0.4117093,0.0069828383,0.0055918377,1.4896116,0.5749362,1.4896116,"up","SYNRG",11276,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030121 // AP-1 adaptor complex // traceable author statement /// 0030130 // clathrin coat of trans-Golgi network vesicle // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr17:35877485-35969544 (-) // 99.86 // q12"]
["11732996_at",0.3208742,0.2909689,0.2876587,-0.2876587,-0.35377026,-0.37164307,0.0005783946,2.0937947e-5,1.5556576,0.6375246,1.5556576,"up","HSP90AA1",3320,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006457 // protein folding // inferred from electronic annotation /// 0006839 // mitochondrial transport // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // non-traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0042026 // protein refolding // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045040 // protein import into mitochondrial outer membrane // inferred from direct assay /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from sequence or structural similarity /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from electronic annotation /// 0046209 // nitric oxide metabolic process // traceable author statement /// 0050999 // regulation of nitric-oxide synthase activity // traceable author statement /// 0051131 // chaperone-mediated protein complex assembly // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0042470 // melanosome // inferred from electronic annotation","0000166 // nucleotide binding // traceable author statement /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // traceable author statement /// 0016887 // ATPase activity // inferred from direct assay /// 0030235 // nitric-oxide synthase regulator activity // inferred from direct assay /// 0030235 // nitric-oxide synthase regulator activity // inferred from electronic annotation /// 0030911 // TPR domain binding // inferred from direct assay /// 0030911 // TPR domain binding // traceable author statement /// 0030911 // TPR domain binding // inferred from sequence or structural similarity /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // traceable author statement /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr14:102547075-102606099 (-) // 80.64 // q32.31"]
["11724264_a_at",0.389884,0.29585648,0.21657753,-0.21657753,-0.33005142,-0.33896542,0.0017212598,0.0007279402,1.5114893,0.59597075,1.5114893,"up","RABL5",64792,"0007264 // small GTPase mediated signal transduction // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr7:100956647-100965093 (-) // 52.12 // q22.1"]
["11732998_at",0.29428387,0.41535473,0.25071573,-0.25071526,-0.26171112,-0.3739891,0.0016147236,0.00061703,1.5321844,0.6155899,1.5321844,"up","MCM6",4175,"0000075 // cell cycle checkpoint // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // non-traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0006268 // DNA unwinding involved in replication // inferred from electronic annotation /// 0006270 // DNA-dependent DNA replication initiation // inferred from electronic annotation /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0042555 // MCM complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003678 // DNA helicase activity // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0004003 // ATP-dependent DNA helicase activity // inferred from direct assay /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction","chr2:136597197-136634058 (-) // 97.91 // q21.3"]
["11722239_a_at",-0.20619488,-0.1383915,-0.13793755,0.13793755,0.4254551,0.1577425,0.01500758,0.013656768,-1.3206239,-0.40121967,1.3206239,"down","HIPK1",204851,"0001654 // eye development // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from direct assay /// 0007224 // smoothened signaling pathway // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0010803 // regulation of tumor necrosis factor-mediated signaling pathway // inferred from direct assay /// 0010842 // retina layer formation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from sequence or structural similarity /// 0048596 // embryonic camera-type eye morphogenesis // inferred from electronic annotation /// 0060059 // embryonic retina morphogenesis in camera-type eye // inferred from electronic annotation /// 0060216 // definitive hemopoiesis // inferred from sequence or structural similarity /// 0060235 // lens induction in camera-type eye // inferred from electronic annotation /// 0061072 // iris morphogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016605 // PML body // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr1:114471813-114520491 (+) // 98.78 // p13.2"]
["11743637_a_at",0.33053064,0.21860695,0.24544907,-0.35267067,-0.24586105,-0.21860695,0.0015242294,0.00053421536,1.4511954,0.53724176,1.4511954,"up","DIS3L2",129563,"0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from mutant phenotype /// 0007067 // mitosis // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation /// 0051306 // mitotic sister chromatid separation // inferred from mutant phenotype /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0004540 // ribonuclease activity // inferred from direct assay /// 0004540 // ribonuclease activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr2:232825954-233201907 (+) // 94.62 // q37.1"]
["11752351_a_at",0.45225048,0.25346756,0.36253643,-0.25346756,-0.2928486,-0.33774233,0.0014630664,0.00047807707,1.5700071,0.650771,1.5700071,"up","PPP1R15B",84919,"0006417 // regulation of translation // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0006983 // ER overload response // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation","0000164 // protein phosphatase type 1 complex // inferred from electronic annotation","0004722 // protein serine/threonine phosphatase activity // inferred from electronic annotation","chr1:204375079-204380945 (-) // 99.91 // q32.1"]
["11751269_a_at",0.32347298,0.24531174,0.2531929,-0.4473319,-0.24634457,-0.24531174,0.002252896,0.0012071527,1.502108,0.58698857,1.502108,"up","SUPT3H",8464,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006352 // transcription initiation, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0016578 // histone deubiquitination // inferred from direct assay /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0030914 // STAGA complex // inferred from direct assay /// 0033276 // transcription factor TFTC complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0004402 // histone acetyltransferase activity // inferred from direct assay","chr6:44797073-45345601 (-) // 99.79 // p21.1"]
["11716017_at",-0.20665741,-0.16406155,-0.1299696,0.31129265,0.27362442,0.1299696,0.0036543524,0.0024346611,-1.3242649,-0.40519172,1.3242649,"down","MAL2",114569,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr8:120220605-120257913 (+) // 88.06 // q24.12"]
["11745988_a_at",0.44468737,0.2769742,0.31116533,-0.2769742,-0.29211187,-0.29956627,0.0011783505,0.0002522385,1.551675,0.6338264,1.551675,"up","ADPGK",83440,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006096 // glycolysis // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0043843 // ADP-specific glucokinase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:73043635-73076073 (-) // 98.19 // q24.1"]
["11743252_a_at",0.16469765,0.25469875,0.24521446,-0.26119137,-0.16469765,-0.23219681,0.0013760548,0.00040036297,1.3574499,0.4408989,1.3574499,"up","CALD1",800,"0006928 // cellular component movement // traceable author statement /// 0006936 // muscle contraction // traceable author statement /// 0006936 // muscle contraction // inferred from electronic annotation /// 0032092 // positive regulation of protein binding // inferred from electronic annotation /// 0051017 // actin filament bundle assembly // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005884 // actin filament // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0030016 // myofibril // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0030478 // actin cap // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0003779 // actin binding // traceable author statement /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005516 // calmodulin binding // traceable author statement /// 0005523 // tropomyosin binding // traceable author statement /// 0017022 // myosin binding // inferred from electronic annotation","chr7:134463969-134655474 (+) // 78.98 // q33"]
["11739457_a_at",0.3683977,0.17339945,0.18169785,-0.17339945,-0.23413515,-0.22814083,0.0036513812,0.002430024,1.3689377,0.4530568,1.3689377,"up","SYNC",81493,"0045103 // intermediate filament-based process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005882 // intermediate filament // inferred from electronic annotation /// 0030018 // Z disc // inferred from electronic annotation /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation","chr1:33145381-33168368 (-) // 95.92 // p35.1"]
["11739591_s_at",-0.2174778,-0.19998074,-0.1552,0.31595325,0.1552,0.20205116,0.0022963006,0.0012569329,-1.3335645,-0.41528767,1.3335645,"down","MINA",84864,"0042254 // ribosome biogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay","","chr3:97660660-97691295 (-) // 99.04 // q11.2"]
["11762355_at",0.2999544,0.23785734,0.22391224,-0.22391224,-0.36704493,-0.23568153,0.0014867174,0.0005043165,1.4433831,0.52945423,1.4433831,"up","LOC554207",554207,"","","","chr14:21576201-21584861 (+) // 83.02 // q11.2"]
["11721524_s_at",-0.32655048,-0.39052057,-0.3656826,0.34645557,0.34308863,0.32655048,0.00035482424,3.6837796e-6,-1.6240726,-0.69961613,1.6240726,"down","ZNF706",51123,"","0005622 // intracellular // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:102209271-102217960 (-) // 97.31 // q22.3"]
["11718057_at",-0.13080502,-0.15976906,-0.12062645,0.31625938,0.31862736,0.12062645,0.005649187,0.004298929,-1.3093988,-0.38890457,1.3093988,"down","UTP11L",51118,"0006364 // rRNA processing // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from mutant phenotype /// 0007399 // nervous system development // inferred from mutant phenotype /// 0048011 // nerve growth factor receptor signaling pathway // inferred from mutant phenotype","0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0032040 // small-subunit processome // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:38474929-38490494 (+) // 67.45 // p34.3"]
["11762199_s_at",0.3530941,0.310524,0.16812515,-0.2586403,-0.19022655,-0.16812515,0.0025781633,0.0014844979,1.3975616,0.48291177,1.3975616,"up","LOC100287497",100287497,"","0016021 // integral to membrane // inferred from electronic annotation","","chr1:721319-722133 (+) // 26.88 // p36.33"]
["11740140_a_at",0.42544127,0.40267754,0.5575328,-0.40267754,-0.5522957,-0.7491574,0.0017525848,0.00075930246,2.0419214,1.0299274,2.0419214,"up","RASGRP3",25780,"0000165 // MAPK cascade // non-traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // inferred from electronic annotation /// 0032854 // positive regulation of Rap GTPase activity // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043087 // regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0032045 // guanyl-nucleotide exchange factor complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0004871 // signal transducer activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005088 // Ras guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0017016 // Ras GTPase binding // inferred from electronic annotation /// 0019900 // kinase binding // inferred from electronic annotation /// 0019992 // diacylglycerol binding // non-traceable author statement /// 0046582 // Rap GTPase activator activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:33738941-33789797 (+) // 95.32 // p22.3"]
["11753991_x_at",0.19392395,0.2223978,0.1347723,-0.1347723,-0.33272076,-0.25681305,0.0037700427,0.0025393397,1.3426967,0.42513338,1.3426967,"up","MYL6B",140465,"0006936 // muscle contraction // traceable author statement /// 0007519 // skeletal muscle tissue development // traceable author statement /// 0030049 // muscle filament sliding // traceable author statement","0005829 // cytosol // traceable author statement /// 0005859 // muscle myosin complex // traceable author statement /// 0016459 // myosin complex // traceable author statement /// 0016459 // myosin complex // inferred from electronic annotation /// 0016461 // unconventional myosin complex // traceable author statement","0003774 // motor activity // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008307 // structural constituent of muscle // traceable author statement","chr12:56546370-56551760 (+) // 79.02 // q13.2"]
["11732140_at",-0.25228596,-0.35043907,-0.14784908,0.1624484,0.14784908,0.20749187,0.003512565,0.0023008662,-1.3405154,-0.42278782,1.3405154,"down","SYNJ2BP-COX16","100529257 /// 51241","","0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","","chr14:70791798-70826448 (-) // 78.09 // q24.2"]
["11735913_s_at",0.15690947,0.120844364,0.16007805,-0.37241125,-0.12084389,-0.32775068,0.0073021553,0.0059058773,1.3375683,0.4196126,1.3375683,"up","TNXB","7146 /// 7148","0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006641 // triglyceride metabolic process // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from sequence or structural similarity /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from sequence or structural similarity /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0032963 // collagen metabolic process // inferred from mutant phenotype /// 0043206 // fibril organization // inferred from electronic annotation /// 0043506 // regulation of JUN kinase activity // inferred from electronic annotation /// 0048251 // elastic fiber assembly // inferred from mutant phenotype","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005583 // fibrillar collagen // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005622 // intracellular // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity","0005102 // receptor binding // inferred from electronic annotation /// 0005178 // integrin binding // inferred from sequence or structural similarity /// 0005201 // extracellular matrix structural constituent // non-traceable author statement /// 0005518 // collagen binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from sequence or structural similarity /// 0008201 // heparin binding // inferred from electronic annotation","chr6:32008932-32013905 (-) // 99.33 // p21.33"]
["11724837_at",-0.30627775,-0.41516542,-0.23214912,0.29166222,0.23214912,0.3071537,0.0014867174,0.0005047034,-1.5103182,-0.59485245,1.5103182,"down","NCEH1",57552,"0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006805 // xenobiotic metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004091 // carboxylesterase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017171 // serine hydrolase activity // inferred from electronic annotation /// 0042301 // phosphate ion binding // inferred from electronic annotation","chr3:172348038-172429008 (-) // 97.27 // q26.31"]
["11735913_s_at",0.15690947,0.120844364,0.16007805,-0.37241125,-0.12084389,-0.32775068,0.0073021553,0.0059058773,1.3375683,0.4196126,1.3375683,"up","TNXA","7146 /// 7148","0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006641 // triglyceride metabolic process // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from sequence or structural similarity /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from sequence or structural similarity /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0032963 // collagen metabolic process // inferred from mutant phenotype /// 0043206 // fibril organization // inferred from electronic annotation /// 0043506 // regulation of JUN kinase activity // inferred from electronic annotation /// 0048251 // elastic fiber assembly // inferred from mutant phenotype","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005583 // fibrillar collagen // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005622 // intracellular // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity","0005102 // receptor binding // inferred from electronic annotation /// 0005178 // integrin binding // inferred from sequence or structural similarity /// 0005201 // extracellular matrix structural constituent // non-traceable author statement /// 0005518 // collagen binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from sequence or structural similarity /// 0008201 // heparin binding // inferred from electronic annotation","chr6:32008932-32013905 (-) // 99.33 // p21.33"]
["11718915_a_at",0.31004047,0.26306534,0.23295212,-0.23315048,-0.28574944,-0.23295212,0.00070557836,5.3281605e-5,1.433263,0.5193033,1.433263,"up","RGS19",10287,"0006914 // autophagy // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation /// 0038032 // termination of G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // not recorded","0005624 // membrane fraction // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // not recorded /// 0005794 // Golgi apparatus // traceable author statement /// 0005834 // heterotrimeric G-protein complex // traceable author statement /// 0005886 // plasma membrane // not recorded /// 0005903 // brush border // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0044445 // cytosolic part // inferred from electronic annotation","0001965 // G-protein alpha-subunit binding // inferred from electronic annotation /// 0005096 // GTPase activator activity // not recorded /// 0005515 // protein binding // inferred from physical interaction","chr20:62704533-62711198 (-) // 93.22 // q13.33"]
["11719193_a_at",0.27287912,0.22201633,0.29201365,-0.2538786,-0.25110626,-0.22201633,0.00061382685,2.661193e-5,1.4187661,0.50463676,1.4187661,"up","CBY1",25776,"0008104 // protein localization // inferred from mutant phenotype /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from direct assay /// 0042384 // cilium assembly // inferred from electronic annotation /// 0045444 // fat cell differentiation // inferred from sequence or structural similarity /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0055007 // cardiac muscle cell differentiation // inferred from sequence or structural similarity /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction","chr22:39052654-39069857 (+) // 87.78 // q13.1"]
["11723476_at",-0.25245142,-0.1779244,-0.21550727,0.17792416,0.33249855,0.24237537,0.0017193909,0.00072064763,-1.3814919,-0.46622705,1.3814919,"down","SLC17A5",26503,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006820 // anion transport // traceable author statement /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0015739 // sialic acid transport // inferred from direct assay /// 0015739 // sialic acid transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005765 // lysosomal membrane // traceable author statement /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation","0005351 // sugar:hydrogen symporter activity // traceable author statement /// 0015136 // sialic acid transmembrane transporter activity // inferred from direct assay /// 0015136 // sialic acid transmembrane transporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation","chr6:74303101-74363914 (-) // 86.65 // q13"]
["11750851_a_at",0.08931732,0.45383883,0.34726143,-0.09387922,-0.09559679,-0.08931732,0.0240617,0.022735301,1.3101546,0.38973698,1.3101546,"up","SLC6A6",6533,"0006520 // cellular amino acid metabolic process // traceable author statement /// 0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0006865 // amino acid transport // traceable author statement /// 0015734 // taurine transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005328 // neurotransmitter:sodium symporter activity // inferred from electronic annotation /// 0005368 // taurine transmembrane transporter activity // inferred from electronic annotation /// 0005369 // taurine:sodium symporter activity // inferred from electronic annotation /// 0005369 // taurine:sodium symporter activity // traceable author statement /// 0015293 // symporter activity // inferred from electronic annotation /// 0030977 // taurine binding // inferred from electronic annotation","chr3:14444075-14520409 (+) // 99.24 // p25.1"]
["11720853_a_at",0.1920662,0.26734495,0.34066772,-0.21640491,-0.24548054,-0.1920662,0.0014295598,0.00044332872,1.3992724,0.48467684,1.3992724,"up","NFIA",4774,"0006260 // DNA replication // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0019079 // viral genome replication // non-traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0030054 // cell junction // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from physical interaction","chr1:61547979-61928465 (+) // 93.57 // p31.3"]
["11748266_a_at",-0.15512562,-0.12569714,-0.18924713,0.3693695,0.12569714,0.27660275,0.0061838487,0.0048538316,-1.3322946,-0.41391307,1.3322946,"down","RETSAT",54884,"0042572 // retinol metabolic process // not recorded /// 0042572 // retinol metabolic process // inferred from sequence or structural similarity /// 0042572 // retinol metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005640 // nuclear outer membrane // inferred from sequence or structural similarity /// 0005640 // nuclear outer membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // not recorded /// 0005789 // endoplasmic reticulum membrane // inferred from sequence or structural similarity /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from sequence or structural similarity /// 0031965 // nuclear membrane // inferred from electronic annotation","0016491 // oxidoreductase activity // inferred from sequence or structural similarity /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0051786 // all-trans-retinol 13,14-reductase activity // not recorded /// 0051786 // all-trans-retinol 13,14-reductase activity // inferred from sequence or structural similarity /// 0051786 // all-trans-retinol 13,14-reductase activity // inferred from electronic annotation","chr2:85570233-85581689 (-) // 100.0 // p11.2"]

{"sheet":"Diff Data(UP)","index":4,"n_rows":514,"n_cols":19,"rows_kept":514,"merged":[[0,1,0,3],[0,4,0,6],[0,7,0,8],[0,9,0,12],[0,13,0,18]]}
["Probe","KD","KD","KD","NC","NC","NC","P-value","P-value","Fold change","Fold change","Fold change","Fold change","Annotation","Annotation","Annotation","Annotation","Annotation","Annotation"]
["probeSet","G416-1_(PrimeView).CEL","G416-2_(PrimeView).CEL","G416-3_(PrimeView).CEL","G415-1_(PrimeView).CEL","G415-2_(PrimeView).CEL","G415-3_(PrimeView).CEL","Corrected p-value","P-value","Fold change","Log Fold change","Absolute Fold change","Regulation","Gene Symbol","Entrez Gene","Gene Ontology Biological Process","Gene Ontology Cellular Component","Gene Ontology Molecular Function","Alignments"]
["11736049_at",0.26233292,0.17495155,0.18291712,-0.17495155,-0.3508091,-0.1763258,0.0036513812,0.0024283307,1.3573217,0.4407627,1.3573217,"up","C6orf225",619208,"","","","chr6:112408673-112423547 (+) // 61.5 // q21"]
["11739455_a_at",0.4130926,0.31958103,0.30687046,-0.30687046,-0.5114317,-0.3934164,0.001365887,0.00038529543,1.6822836,0.7504209,1.6822836,"up","SGMS1",259230,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006665 // sphingolipid metabolic process // inferred from electronic annotation /// 0006686 // sphingomyelin biosynthetic process // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0016049 // cell growth // inferred from direct assay /// 0016049 // cell growth // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation /// 0071356 // cellular response to tumor necrosis factor // inferred from electronic annotation","0000138 // Golgi trans cisterna // inferred from direct assay /// 0000139 // Golgi membrane // traceable author statement /// 0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030173 // integral to Golgi membrane // inferred from direct assay","0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0033188 // sphingomyelin synthase activity // inferred from mutant phenotype /// 0033188 // sphingomyelin synthase activity // inferred from electronic annotation /// 0047493 // ceramide cholinephosphotransferase activity // inferred from direct assay","chr10:52065359-52383737 (-) // 98.65 // q11.23"]
["11746856_a_at",0.20501328,0.21613598,0.17624378,-0.29546356,-0.32691526,-0.1762433,0.0016010772,0.00060374127,1.3806411,0.46533838,1.3806411,"up","SERPINE1",5054,"0000302 // response to reactive oxygen species // inferred from electronic annotation /// 0001300 // chronological cell aging // inferred from expression pattern /// 0001525 // angiogenesis // inferred from expression pattern /// 0002576 // platelet degranulation // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010469 // regulation of receptor activity // inferred from direct assay /// 0010757 // negative regulation of plasminogen activation // inferred from direct assay /// 0010757 // negative regulation of plasminogen activation // inferred from mutant phenotype /// 0010951 // negative regulation of endopeptidase activity // inferred from direct assay /// 0014912 // negative regulation of smooth muscle cell migration // inferred from direct assay /// 0030168 // platelet activation // traceable author statement /// 0030194 // positive regulation of blood coagulation // inferred from mutant phenotype /// 0030195 // negative regulation of blood coagulation // inferred by curator /// 0030336 // negative regulation of cell migration // inferred from direct assay /// 0032757 // positive regulation of interleukin-8 production // inferred from mutant phenotype /// 0033629 // negative regulation of cell adhesion mediated by integrin // inferred from direct assay /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0035491 // positive regulation of leukotriene production involved in inflammatory response // inferred from mutant phenotype /// 0042060 // wound healing // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042246 // tissue regeneration // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0042730 // fibrinolysis // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0045765 // regulation of angiogenesis // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype /// 0048260 // positive regulation of receptor-mediated endocytosis // inferred from direct assay /// 0048260 // positive regulation of receptor-mediated endocytosis // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred from genetic interaction /// 0050820 // positive regulation of coagulation // inferred from electronic annotation /// 0050829 // defense response to Gram-negative bacterium // inferred from genetic interaction /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051918 // negative regulation of fibrinolysis // inferred from direct assay /// 0055093 // response to hyperoxia // inferred from electronic annotation /// 0061044 // negative regulation of vascular wound healing // inferred from genetic interaction /// 0061045 // negative regulation of wound healing // inferred by curator /// 0070887 // cellular response to chemical stimulus // inferred from mutant phenotype /// 0071222 // cellular response to lipopolysaccharide // inferred from mutant phenotype /// 0071258 // cellular response to gravity // inferred from electronic annotation /// 0090026 // positive regulation of monocyte chemotaxis // inferred from mutant phenotype /// 2000098 // negative regulation of smooth muscle cell-matrix adhesion // inferred from direct assay","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0031093 // platelet alpha granule lumen // traceable author statement","0002020 // protease binding // inferred from physical interaction /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from direct assay /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from physical interaction /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr7:100770383-100781574 (+) // 89.86 // q22.1"]
["11733057_a_at",0.27127934,0.19888687,0.27145576,-0.19888687,-0.2912693,-0.3797922,0.0017275709,0.0007330584,1.4511435,0.53719014,1.4511435,"up","PTBP3",9991,"0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0033119 // negative regulation of RNA splicing // inferred from direct assay /// 0043249 // erythrocyte maturation // inferred from electronic annotation /// 0045595 // regulation of cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement","chr9:114980718-115095912 (-) // 94.87 // q32"]
["11730774_at",0.26904392,0.35275555,0.23015308,-0.32134342,-0.2766943,-0.23015308,0.0011434965,0.00023426324,1.474318,0.56004775,1.474318,"up","TMEM14A",28978,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:52535883-52551386 (+) // 88.43 // p12.2"]
["11719730_at",0.18863726,0.18644762,0.22762012,-0.3717537,-0.20364761,-0.18644762,0.0028132095,0.0016864719,1.3706416,0.45485133,1.3706416,"up","INA",9118,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042246 // tissue regeneration // inferred from electronic annotation /// 0045104 // intermediate filament cytoskeleton organization // inferred from electronic annotation /// 0060052 // neurofilament cytoskeleton organization // inferred from electronic annotation","0005882 // intermediate filament // inferred from electronic annotation /// 0005883 // neurofilament // inferred from electronic annotation /// 0005883 // neurofilament // traceable author statement","0005198 // structural molecule activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement","chr10:105036896-105050108 (+) // 98.06 // q24.33"]
["11737996_at",0.7015357,0.54428434,0.25306368,-0.25306368,-0.35005808,-0.27960968,0.005473863,0.004125435,1.733721,0.79387176,1.733721,"up","LRRC3",81543,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr21:45875367-45878739 (+) // 73.93 // q22.3"]
["11722903_s_at",0.22649956,0.28641033,0.31917763,-0.34090853,-0.3308878,-0.22650003,0.0011259156,0.00022387244,1.4915317,0.5767946,1.4915317,"up","GSTT2B","2953 /// 653689","","0005737 // cytoplasm // inferred from electronic annotation","0004364 // glutathione transferase activity // inferred from electronic annotation /// 0004364 // glutathione transferase activity // non-traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation","chr22:24322338-24326106 (+) // 68.89 // q11.23"]
["11722687_a_at",0.36877155,0.5827007,0.59617805,-0.43266487,-0.36877155,-0.43786144,0.001213793,0.00026979306,1.903933,0.92898273,1.903933,"up","LIFR",3977,"0007166 // cell surface receptor signaling pathway // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from direct assay /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0034097 // response to cytokine stimulus // inferred from direct assay /// 0038165 // oncostatin-M-mediated signaling pathway // inferred from direct assay /// 0042221 // response to chemical stimulus // inferred from electronic annotation /// 0045768 // positive regulation of anti-apoptosis // inferred from electronic annotation /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0048861 // leukemia inhibitory factor signaling pathway // inferred from direct assay /// 0048861 // leukemia inhibitory factor signaling pathway // traceable author statement /// 0048861 // leukemia inhibitory factor signaling pathway // inferred from electronic annotation /// 0070120 // ciliary neurotrophic factor-mediated signaling pathway // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004896 // cytokine receptor activity // inferred from electronic annotation /// 0004897 // ciliary neurotrophic factor receptor activity // inferred from direct assay /// 0004923 // leukemia inhibitory factor receptor activity // inferred from direct assay /// 0004923 // leukemia inhibitory factor receptor activity // inferred from electronic annotation /// 0004923 // leukemia inhibitory factor receptor activity // traceable author statement /// 0004924 // oncostatin-M receptor activity // inferred from direct assay /// 0005127 // ciliary neurotrophic factor receptor binding // inferred from physical interaction /// 0019838 // growth factor binding // inferred from physical interaction /// 0019955 // cytokine binding // inferred from electronic annotation","chr5:38475026-38556748 (-) // 98.68 // p13.1"]
["11751224_x_at",0.20609379,0.24343777,0.21337128,-0.22495842,-0.27476788,-0.20609379,0.00067191356,4.1198415e-5,1.3719624,0.45624095,1.3719624,"up","MAPK1",5594,"0000165 // MAPK cascade // traceable author statement /// 0000165 // MAPK cascade // inferred from electronic annotation /// 0000186 // activation of MAPKK activity // traceable author statement /// 0000187 // activation of MAPK activity // traceable author statement /// 0000189 // MAPK import into nucleus // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0006935 // chemotaxis // traceable author statement /// 0006950 // response to stress // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009636 // response to toxin // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010800 // positive regulation of peptidyl-threonine phosphorylation // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0019233 // sensory perception of pain // inferred from electronic annotation /// 0019858 // cytosine metabolic process // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032872 // regulation of stress-activated MAPK cascade // traceable author statement /// 0033598 // mammary gland epithelial cell proliferation // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0042221 // response to chemical stimulus // inferred from electronic annotation /// 0043330 // response to exogenous dsRNA // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050852 // T cell receptor signaling pathway // inferred from electronic annotation /// 0050853 // B cell receptor signaling pathway // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0051493 // regulation of cytoskeleton organization // traceable author statement /// 0060397 // JAK-STAT cascade involved in growth hormone signaling pathway // traceable author statement /// 0060716 // labyrinthine layer blood vessel development // inferred from electronic annotation /// 0070371 // ERK1 and ERK2 cascade // inferred from direct assay /// 0070371 // ERK1 and ERK2 cascade // traceable author statement /// 0072584 // caveolin-mediated endocytosis // traceable author statement /// 0090170 // regulation of Golgi inheritance // traceable author statement /// 2000641 // regulation of early endosome to late endosome transport // traceable author statement","0005625 // soluble fraction // inferred from electronic annotation /// 0005626 // insoluble fraction // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005769 // early endosome // traceable author statement /// 0005770 // late endosome // traceable author statement /// 0005794 // Golgi apparatus // traceable author statement /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005901 // caveola // traceable author statement /// 0005925 // focal adhesion // traceable author statement /// 0031143 // pseudopodium // inferred from electronic annotation /// 0032839 // dendrite cytoplasm // inferred from electronic annotation /// 0033267 // axon part // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0001784 // phosphotyrosine binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004707 // MAP kinase activity // inferred from electronic annotation /// 0004707 // MAP kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008353 // RNA polymerase II carboxy-terminal domain kinase activity // inferred from sequence or structural similarity /// 0008353 // RNA polymerase II carboxy-terminal domain kinase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019902 // phosphatase binding // inferred from physical interaction /// 0031435 // mitogen-activated protein kinase kinase kinase binding // inferred from electronic annotation","chr22:22118314-22221938 (-) // 98.04 // q11.21"]
["11745790_a_at",0.21875381,0.1376934,0.17807388,-0.1376934,-0.34515333,-0.3854065,0.005672084,0.004318796,1.382799,0.46759146,1.382799,"up","TMEM135",65084,"0007031 // peroxisome organization // inferred from sequence or structural similarity","0005777 // peroxisome // inferred from sequence or structural similarity /// 0005777 // peroxisome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:86748883-87034802 (+) // 99.04 // q14.2"]
["11743648_a_at",0.17151451,0.15586662,0.15340805,-0.15340805,-0.2993021,-0.24027252,0.0017953549,0.0007910198,1.3115358,0.3912573,1.3115358,"up","DCAF6",55827,"0016567 // protein ubiquitination // inferred by curator /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0080008 // CUL4-RING ubiquitin ligase complex // inferred from direct assay","0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from direct assay","chr1:167905484-168045081 (+) // 95.47 // q24.2"]
["11715934_s_at",0.34877396,0.3229413,0.28343296,-0.28343296,-0.49161482,-0.3422613,0.0014235608,0.00043871574,1.6141998,0.69081914,1.6141998,"up","TAGLN",6876,"0007517 // muscle organ development // inferred from electronic annotation /// 0007517 // muscle organ development // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation","chr11:117070039-117075510 (+) // 97.59 // q23.3"]
["11748865_a_at",0.3122244,0.32123184,0.23886395,-0.23886395,-0.38387203,-0.34894276,0.001213793,0.00026943727,1.5312039,0.61466634,1.5312039,"up","TMEM139",135932,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr7:142983030-142984389 (+) // 82.1 // q34"]
["11740489_at",0.49190855,0.5185833,0.54396534,-0.6413474,-0.49190855,-0.6660104,0.0006672249,3.830129e-5,2.1703203,1.1179079,2.1703203,"up","MAPK9",5601,"0000165 // MAPK cascade // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006950 // response to stress // traceable author statement /// 0007254 // JNK cascade // inferred from direct assay /// 0007254 // JNK cascade // traceable author statement /// 0007258 // JUN phosphorylation // inferred from direct assay /// 0008063 // Toll signaling pathway // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0010744 // positive regulation of macrophage derived foam cell differentiation // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0031558 // induction of apoptosis in response to chemical stimulus // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0046686 // response to cadmium ion // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004705 // JUN kinase activity // inferred from direct assay /// 0004707 // MAP kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr5:179673021-179719071 (-) // 95.9 // q35.3"]
["11747825_a_at",0.24491072,0.206563,0.21240568,-0.3398447,-0.206563,-0.24695349,0.0012306612,0.0002967754,1.4003106,0.48574686,1.4003106,"up","NPHP3-ACAD11","100532724 /// 27031 /// 84129","0006629 // lipid metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0033539 // fatty acid beta-oxidation using acyl-CoA dehydrogenase // inferred from direct assay /// 0045494 // photoreceptor cell maintenance // inferred from mutant phenotype /// 0048496 // maintenance of organ identity // inferred from mutant phenotype /// 0048496 // maintenance of organ identity // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060271 // cilium morphogenesis // inferred from sequence or structural similarity /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from direct assay /// 2000095 // regulation of Wnt receptor signaling pathway, planar cell polarity pathway // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005777 // peroxisome // inferred from sequence or structural similarity /// 0005777 // peroxisome // inferred from electronic annotation /// 0005871 // kinesin complex // inferred from electronic annotation /// 0005929 // cilium // inferred from direct assay /// 0005929 // cilium // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0072372 // primary cilium // inferred from direct assay","0003777 // microtubule motor activity // inferred from electronic annotation /// 0003995 // acyl-CoA dehydrogenase activity // inferred from electronic annotation /// 0004466 // long-chain-acyl-CoA dehydrogenase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016627 // oxidoreductase activity, acting on the CH-CH group of donors // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017099 // very-long-chain-acyl-CoA dehydrogenase activity // inferred from direct assay /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation /// 0070991 // medium-chain-acyl-CoA dehydrogenase activity // inferred from direct assay","chr3:132294614-132345921 (-) // 89.18 // q22.1"]
["11725861_a_at",0.5248928,0.41057587,0.43120575,-0.46441555,-0.4105754,-0.5880704,0.00090130133,0.00011761167,1.9228487,0.9432453,1.9228487,"up","MYBL1",4603,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation","chr8:67474410-67525484 (-) // 97.22 // q13.1"]
["11747135_x_at",0.3315673,0.16510916,0.17557144,-0.2106781,-0.17387533,-0.16510916,0.0029874577,0.0018488272,1.3262048,0.4073035,1.3262048,"up","CNTRL",11064,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr9:123914320-123939888 (+) // 95.08 // q33.2"]
["11744170_s_at",0.22834063,0.19635391,0.13889122,-0.28687286,-0.28563356,-0.1388917,0.0026835494,0.0015798501,1.3425676,0.42499465,1.3425676,"up","NAT14",57106,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006352 // transcription initiation, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement","0005634 // nucleus // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0008080 // N-acetyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation","chr19:55996370-55998933 (+) // 94.98 // q13.42"]
["11726048_x_at",0.36135387,0.13059235,0.27170372,-0.13270998,-0.13323307,-0.13059187,0.005855648,0.0045140437,1.3074251,0.3867283,1.3074251,"up","ASXL2",55252,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0035360 // positive regulation of peroxisome proliferator activated receptor signaling pathway // inferred from direct assay /// 0045600 // positive regulation of fat cell differentiation // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation","0042975 // peroxisome proliferator activated receptor binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:25960346-26101385 (-) // 97.95 // p23.3"]
["11728681_s_at",0.23003197,0.20291138,0.24664497,-0.20291138,-0.2551422,-0.57511044,0.009647093,0.008172193,1.4854679,0.5709174,1.4854679,"up","PAIP1",10605,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016070 // RNA metabolic process // inferred from electronic annotation /// 0016071 // mRNA metabolic process // traceable author statement /// 0045727 // positive regulation of translation // inferred from direct assay /// 0048255 // mRNA stabilization // traceable author statement","0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008494 // translation activator activity // inferred from direct assay","chr5:43526368-43557195 (-) // 96.94 // p12"]
["11725423_a_at",0.17654228,0.20459223,0.19223738,-0.1826458,-0.17654228,-0.22459221,0.00059550256,2.311849e-5,1.3065093,0.3857174,1.3065093,"up","ZNF521",25925,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006959 // humoral immune response // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0009887 // organ morphogenesis // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0051573 // negative regulation of histone H3-K9 methylation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr18:22641889-22932214 (-) // 99.64 // q11.2"]
["11721894_at",0.5881109,0.3695488,0.4125042,-0.3695488,-0.5677824,-0.5579448,0.0014867174,0.0005046402,1.9387767,0.9551467,1.9387767,"up","GAS1",2619,"0002053 // positive regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0007411 // axon guidance // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008589 // regulation of smoothened signaling pathway // inferred from sequence or structural similarity /// 0008589 // regulation of smoothened signaling pathway // inferred from electronic annotation /// 0009953 // dorsal/ventral pattern formation // inferred from electronic annotation /// 0010955 // negative regulation of protein processing // inferred from mutant phenotype /// 0012501 // programmed cell death // inferred from electronic annotation /// 0021587 // cerebellum morphogenesis // inferred from electronic annotation /// 0021904 // dorsal/ventral neural tube patterning // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from electronic annotation /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from expression pattern /// 0042473 // outer ear morphogenesis // inferred from electronic annotation /// 0042474 // middle ear morphogenesis // inferred from electronic annotation /// 0042476 // odontogenesis // inferred from electronic annotation /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from sequence or structural similarity /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043010 // camera-type eye development // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045165 // cell fate commitment // inferred from sequence or structural similarity /// 0045165 // cell fate commitment // inferred from electronic annotation /// 0045879 // negative regulation of smoothened signaling pathway // inferred from electronic annotation /// 0045880 // positive regulation of smoothened signaling pathway // inferred from electronic annotation /// 0045930 // negative regulation of mitotic cell cycle // inferred from direct assay /// 0045930 // negative regulation of mitotic cell cycle // inferred from genetic interaction /// 0048589 // developmental growth // inferred from sequence or structural similarity /// 0048589 // developmental growth // inferred from electronic annotation /// 0048592 // eye morphogenesis // inferred from electronic annotation /// 0048598 // embryonic morphogenesis // inferred from electronic annotation /// 0048701 // embryonic cranial skeleton morphogenesis // inferred from electronic annotation /// 0048706 // embryonic skeletal system development // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050680 // negative regulation of epithelial cell proliferation // inferred from electronic annotation /// 0060021 // palate development // inferred from electronic annotation /// 0060628 // regulation of ER to Golgi vesicle-mediated transport // inferred from mutant phenotype","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0031225 // anchored to membrane // inferred from electronic annotation /// 0046658 // anchored to plasma membrane // inferred from sequence or structural similarity /// 0046658 // anchored to plasma membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr9:89559274-89562241 (-) // 90.64 // q21.33"]
["11721902_a_at",0.18941355,0.1905508,0.2443347,-0.29262066,-0.20098114,-0.18941355,0.0012464859,0.00030813218,1.352634,0.43577147,1.352634,"up","SERPINI1",5274,"0007417 // central nervous system development // traceable author statement /// 0007422 // peripheral nervous system development // traceable author statement /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // not recorded /// 0030155 // regulation of cell adhesion // inferred from electronic annotation /// 0030162 // regulation of proteolysis // not recorded","0005576 // extracellular region // inferred from electronic annotation","0004867 // serine-type endopeptidase inhibitor activity // not recorded /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // traceable author statement /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr3:167453510-167543560 (+) // 99.62 // q26.1"]
["11727743_at",0.18654919,0.2713871,0.27536964,-0.35228586,-0.37898207,-0.18654919,0.0022204556,0.0011832309,1.4644657,0.5503744,1.4644657,"up","CAMK2N2",94032,"0006469 // negative regulation of protein kinase activity // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0004860 // protein kinase inhibitor activity // inferred from electronic annotation","chr3:183977004-183979255 (-) // 77.88 // q27.1"]
["11723796_a_at",0.16265965,0.3022132,0.15775633,-0.20179224,-0.2226386,-0.1577568,0.0024881244,0.0014133662,1.3209772,0.4016056,1.3209772,"up","SFMBT1",51460,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","","chr3:52938170-53079301 (-) // 97.73 // p21.1"]
["11717812_a_at",0.5195451,0.56328773,0.35490227,-0.35490274,-0.46046782,-0.36069632,0.001213793,0.00026900903,1.829269,0.8712673,1.829269,"up","KIF3C",3797,"0007018 // microtubule-based movement // traceable author statement /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005871 // kinesin complex // traceable author statement /// 0005874 // microtubule // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // traceable author statement /// 0003777 // microtubule motor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation","chr2:26149466-26205533 (-) // 92.82 // p23.3"]
["11754620_s_at",0.35463428,0.23556519,0.37804222,-0.23556519,-0.34778595,-0.24163055,0.001459056,0.00047431968,1.5133452,0.5977411,1.5133452,"up","PKP4",8502,"0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0032321 // positive regulation of Rho GTPase activity // inferred from direct assay /// 0071777 // positive regulation of cell cycle cytokinesis // inferred from mutant phenotype","0000922 // spindle pole // inferred from direct assay /// 0000922 // spindle pole // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // traceable author statement /// 0009898 // internal side of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030057 // desmosome // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0030496 // midbody // inferred from electronic annotation /// 0051233 // spindle midzone // inferred from direct assay /// 0072686 // mitotic spindle // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr2:159499031-159537938 (+) // 99.78 // q24.1"]
["11720289_a_at",0.13321877,0.08916283,0.123000145,-0.08916283,-0.40415382,-0.34895992,0.01694084,0.0156203,1.3157506,0.3958861,1.3157506,"up","CDC42BPA",8476,"0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007097 // nuclear migration // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // inferred from mutant phenotype /// 0031032 // actomyosin structure organization // inferred from mutant phenotype /// 0031532 // actin cytoskeleton reorganization // inferred from direct assay /// 0031532 // actin cytoskeleton reorganization // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from sequence or structural similarity /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from sequence or structural similarity /// 0031252 // cell leading edge // inferred from electronic annotation /// 0042641 // actomyosin // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005083 // small GTPase regulator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:227177562-227506193 (-) // 95.95 // q42.13"]
["11731782_s_at",0.189085,0.24749184,0.22444344,-0.20715714,-0.189085,-0.21452904,0.0005783946,2.1908945e-5,1.3415775,0.42393047,1.3415775,"up","CT45A2","441519 /// 441520 /// 441521 /// 541465 /// 541466 /// 728911","","","","chrX:134928583-134933050 (-) // 75.7 // q26.3"]
["11748382_a_at",0.34924603,0.20835066,0.21676683,-0.20835066,-0.27699804,-0.32687426,0.0017505207,0.0007564604,1.4427907,0.5288621,1.4427907,"up","SMURF2",64750,"0006464 // cellular protein modification process // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0007179 // transforming growth factor beta receptor signaling pathway // not recorded /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0017015 // regulation of transforming growth factor beta receptor signaling pathway // non-traceable author statement /// 0030509 // BMP signaling pathway // traceable author statement /// 0030579 // ubiquitin-dependent SMAD protein catabolic process // inferred from direct assay /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // not recorded /// 0045892 // negative regulation of transcription, DNA-dependent // non-traceable author statement","0000151 // ubiquitin ligase complex // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // not recorded /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0046332 // SMAD binding // inferred from physical interaction","chr17:62541906-62658079 (-) // 98.4 // q23.3"]
["11731782_s_at",0.189085,0.24749184,0.22444344,-0.20715714,-0.189085,-0.21452904,0.0005783946,2.1908945e-5,1.3415775,0.42393047,1.3415775,"up","CT45A1","441519 /// 441520 /// 441521 /// 541465 /// 541466 /// 728911","","","","chrX:134928583-134933050 (-) // 75.7 // q26.3"]
["11747825_a_at",0.24491072,0.206563,0.21240568,-0.3398447,-0.206563,-0.24695349,0.0012306612,0.0002967754,1.4003106,0.48574686,1.4003106,"up","ACAD11","100532724 /// 27031 /// 84129","0006629 // lipid metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0033539 // fatty acid beta-oxidation using acyl-CoA dehydrogenase // inferred from direct assay /// 0045494 // photoreceptor cell maintenance // inferred from mutant phenotype /// 0048496 // maintenance of organ identity // inferred from mutant phenotype /// 0048496 // maintenance of organ identity // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060271 // cilium morphogenesis // inferred from sequence or structural similarity /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from direct assay /// 2000095 // regulation of Wnt receptor signaling pathway, planar cell polarity pathway // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005777 // peroxisome // inferred from sequence or structural similarity /// 0005777 // peroxisome // inferred from electronic annotation /// 0005871 // kinesin complex // inferred from electronic annotation /// 0005929 // cilium // inferred from direct assay /// 0005929 // cilium // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0072372 // primary cilium // inferred from direct assay","0003777 // microtubule motor activity // inferred from electronic annotation /// 0003995 // acyl-CoA dehydrogenase activity // inferred from electronic annotation /// 0004466 // long-chain-acyl-CoA dehydrogenase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016627 // oxidoreductase activity, acting on the CH-CH group of donors // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017099 // very-long-chain-acyl-CoA dehydrogenase activity // inferred from direct assay /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation /// 0070991 // medium-chain-acyl-CoA dehydrogenase activity // inferred from direct assay","chr3:132294614-132345921 (-) // 89.18 // q22.1"]
["11731782_s_at",0.189085,0.24749184,0.22444344,-0.20715714,-0.189085,-0.21452904,0.0005783946,2.1908945e-5,1.3415775,0.42393047,1.3415775,"up","CT45A4","441519 /// 441520 /// 441521 /// 541465 /// 541466 /// 728911","","","","chrX:134928583-134933050 (-) // 75.7 // q26.3"]
["11731782_s_at",0.189085,0.24749184,0.22444344,-0.20715714,-0.189085,-0.21452904,0.0005783946,2.1908945e-5,1.3415775,0.42393047,1.3415775,"up","CT45A3","441519 /// 441520 /// 441521 /// 541465 /// 541466 /// 728911","","","","chrX:134928583-134933050 (-) // 75.7 // q26.3"]
["11731782_s_at",0.189085,0.24749184,0.22444344,-0.20715714,-0.189085,-0.21452904,0.0005783946,2.1908945e-5,1.3415775,0.42393047,1.3415775,"up","CT45A6","441519 /// 441520 /// 441521 /// 541465 /// 541466 /// 728911","","","","chrX:134928583-134933050 (-) // 75.7 // q26.3"]
["11731782_s_at",0.189085,0.24749184,0.22444344,-0.20715714,-0.189085,-0.21452904,0.0005783946,2.1908945e-5,1.3415775,0.42393047,1.3415775,"up","CT45A5","441519 /// 441520 /// 441521 /// 541465 /// 541466 /// 728911","","","","chrX:134928583-134933050 (-) // 75.7 // q26.3"]
["11718364_a_at",0.31028795,0.3270626,0.14104033,-0.14103985,-0.15960455,-0.2097249,0.0036138936,0.0023968115,1.3468478,0.42958674,1.3468478,"up","ST6GALNAC6",30815,"0001574 // ganglioside biosynthetic process // inferred from sequence or structural similarity /// 0001574 // ganglioside biosynthetic process // inferred from electronic annotation /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006677 // glycosylceramide metabolic process // inferred from direct assay /// 0006687 // glycosphingolipid metabolic process // inferred from direct assay /// 0009100 // glycoprotein metabolic process // inferred from direct assay /// 0009312 // oligosaccharide biosynthetic process // inferred from sequence or structural similarity /// 0009312 // oligosaccharide biosynthetic process // inferred from electronic annotation /// 0009988 // cell-cell recognition // inferred by curator","0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030173 // integral to Golgi membrane // inferred from electronic annotation","0001665 // alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity // inferred from sequence or structural similarity /// 0001665 // alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity // inferred from electronic annotation /// 0008373 // sialyltransferase activity // inferred from direct assay /// 0008373 // sialyltransferase activity // inferred from sequence or structural similarity /// 0008373 // sialyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr9:130647600-130661927 (-) // 91.22 // q34.11"]
["11719333_a_at",0.22457218,0.24146366,0.2846279,-0.36909056,-0.22457218,-0.30108738,0.001213793,0.00026953086,1.4625351,0.54847133,1.4625351,"up","DMKN",93099,"","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","","chr19:35988121-36004560 (-) // 88.95 // q13.12"]
["11728727_at",0.14970112,0.17096329,0.22374392,-0.4165516,-0.14970112,-0.16420269,0.010399346,0.008943796,1.3425303,0.4249546,1.3425303,"up","CEACAM7",1087,"","0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0031225 // anchored to membrane // inferred from electronic annotation","","chr19:42177596-42192206 (-) // 42.96 // q13.2"]
["11754137_a_at",0.33277845,0.42366934,0.34528112,-0.68988943,-0.33277845,-0.4275732,0.0026275173,0.0015332842,1.8033215,0.8506566,1.8033215,"up","QKI",9444,"0001570 // vasculogenesis // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008366 // axon ensheathment // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation /// 0042692 // muscle cell differentiation // inferred from electronic annotation /// 0042759 // long-chain fatty acid biosynthetic process // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation","chr6:163835665-163991779 (+) // 83.07 // q26"]
["11758031_s_at",0.4599681,0.35289,0.15830183,-0.18535995,-0.18740463,-0.15830183,0.0061956346,0.004866855,1.4149412,0.50074214,1.4149412,"up","BHLHE41",79365,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0008283 // cell proliferation // non-traceable author statement /// 0009887 // organ morphogenesis // non-traceable author statement /// 0010832 // negative regulation of myotube differentiation // inferred from sequence or structural similarity /// 0010832 // negative regulation of myotube differentiation // inferred from electronic annotation /// 0010944 // negative regulation of transcription by competitive promoter binding // inferred from sequence or structural similarity /// 0010944 // negative regulation of transcription by competitive promoter binding // inferred from electronic annotation /// 0030154 // cell differentiation // non-traceable author statement /// 0032922 // circadian regulation of gene expression // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from sequence or structural similarity /// 0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from electronic annotation /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from sequence or structural similarity /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from electronic annotation /// 0001102 // RNA polymerase II activating transcription factor binding // inferred from sequence or structural similarity /// 0001102 // RNA polymerase II activating transcription factor binding // inferred from electronic annotation /// 0001191 // RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription // inferred from sequence or structural similarity /// 0001191 // RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from sequence or structural similarity /// 0042826 // histone deacetylase binding // inferred from electronic annotation /// 0043425 // bHLH transcription factor binding // inferred from physical interaction /// 0043425 // bHLH transcription factor binding // inferred from sequence or structural similarity /// 0043425 // bHLH transcription factor binding // inferred from electronic annotation /// 0043426 // MRF binding // inferred from sequence or structural similarity /// 0043426 // MRF binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from sequence or structural similarity /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0070888 // E-box binding // inferred from direct assay /// 0070888 // E-box binding // inferred from sequence or structural similarity /// 0070888 // E-box binding // inferred from electronic annotation","chr12:26273346-26273796 (-) // 94.24 // p12.1"]
["11722911_at",0.2929845,0.21875858,0.2712469,-0.21875858,-0.30698967,-0.2454009,0.0008942897,0.00011043223,1.4320148,0.5180464,1.4320148,"up","USP13",8975,"0006355 // regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0010506 // regulation of autophagy // inferred from direct assay /// 0030318 // melanocyte differentiation // traceable author statement /// 0050821 // protein stabilization // inferred from direct assay /// 0070536 // protein K63-linked deubiquitination // inferred from direct assay","","0004197 // cysteine-type endopeptidase activity // inferred from mutant phenotype /// 0004197 // cysteine-type endopeptidase activity // traceable author statement /// 0004221 // ubiquitin thiolesterase activity // inferred from direct assay /// 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0004843 // ubiquitin-specific protease activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0008242 // omega peptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0043130 // ubiquitin binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:179370497-179507189 (+) // 83.41 // q26.33"]
["11719002_at",0.23732662,0.25997066,0.23077106,-0.23077106,-0.32516384,-0.2951517,0.00070557836,5.5786673e-5,1.4403156,0.526385,1.4403156,"up","KDELR3",11015,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006396 // RNA processing // traceable author statement /// 0006621 // protein retention in ER lumen // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0033148 // positive regulation of intracellular estrogen receptor signaling pathway // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 2001014 // regulation of skeletal muscle cell differentiation // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0003724 // RNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0008186 // RNA-dependent ATPase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030331 // estrogen receptor binding // inferred from direct assay /// 0046923 // ER retention sequence binding // inferred from electronic annotation","chr22:38864066-38879445 (+) // 95.88 // q13.1"]
["11744648_s_at",0.16259766,0.18005753,0.17527962,-0.2481842,-0.23752594,-0.16259766,0.0009735221,0.00014387535,1.3092563,0.3887475,1.3092563,"up","AIFM2",84883,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006917 // induction of apoptosis // inferred from mutant phenotype /// 0008637 // apoptotic mitochondrial changes // non-traceable author statement /// 0030261 // chromosome condensation // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005811 // lipid particle // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0004174 // electron-transferring-flavoprotein dehydrogenase activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from direct assay /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation","chr10:71873735-71892690 (-) // 95.53 // q22.1"]
["11728802_a_at",0.31976032,0.17105389,0.2564373,-0.19926739,-0.20147038,-0.17105389,0.0015673926,0.0005727516,1.3563044,0.43968105,1.3563044,"up","PAPD5",64282,"0006260 // DNA replication // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0071044 // histone mRNA catabolic process // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003887 // DNA-directed DNA polymerase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:50186828-50269217 (+) // 95.57 // q12.1"]
["11755887_a_at",0.39941978,0.27694035,0.2866459,-0.33791924,-0.27694035,-0.4976864,0.0018305046,0.00083498046,1.6153543,0.69185066,1.6153543,"up","MTMR12",54545,"0016311 // dephosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0016791 // phosphatase activity // inferred from electronic annotation","chr5:32229748-32313075 (-) // 98.33 // p13.3"]
["11724885_at",0.6762619,0.41635895,0.317585,-0.317585,-0.44655323,-0.50849724,0.0029209414,0.0017786751,1.8586826,0.89428043,1.8586826,"up","CLIC3",9022,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from mutant phenotype /// 0006821 // chloride transport // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0034707 // chloride channel complex // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005247 // voltage-gated chloride channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from mutant phenotype /// 0005254 // chloride channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr9:139889082-139891017 (-) // 91.69 // q34.3"]
["11729773_a_at",0.16053677,0.12240791,0.1486783,-0.12240744,-0.43129015,-0.32620478,0.010209414,0.008745274,1.3539506,0.4371751,1.3539506,"up","PPEF1",5475,"0006470 // protein dephosphorylation // traceable author statement /// 0050906 // detection of stimulus involved in sensory perception // inferred from electronic annotation","","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // traceable author statement /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:18694028-18846077 (+) // 99.97 // p22.13"]
["11751265_x_at",0.3591776,0.2609234,0.14309406,-0.14309406,-0.22533894,-0.22319698,0.0039325557,0.002678954,1.367564,0.45160836,1.367564,"up","PTOV1",53635,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","","chr19:50354010-50363996 (+) // 99.93 // q13.33"]
["11746843_a_at",0.20528126,0.25964975,0.2502699,-0.336586,-0.37548542,-0.20528173,0.001550606,0.0005515692,1.458196,0.5441847,1.458196,"up","ABI2",10152,"0006928 // cellular component movement // inferred from direct assay /// 0007010 // cytoskeleton organization // traceable author statement /// 0007611 // learning or memory // inferred from electronic annotation /// 0008154 // actin polymerization or depolymerization // non-traceable author statement /// 0016358 // dendrite development // inferred from electronic annotation /// 0016477 // cell migration // traceable author statement /// 0016477 // cell migration // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0043010 // camera-type eye development // inferred from electronic annotation","0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from direct assay /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030175 // filopodium // inferred from direct assay /// 0030175 // filopodium // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0008093 // cytoskeletal adaptor activity // traceable author statement /// 0017124 // SH3 domain binding // inferred from physical interaction /// 0017124 // SH3 domain binding // traceable author statement /// 0019900 // kinase binding // non-traceable author statement /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0070064 // proline-rich region binding // inferred from physical interaction","chr2:204193121-204292475 (+) // 94.57 // q33.2"]
["11733840_a_at",0.15125847,0.23187304,0.19087219,-0.3687935,-0.1976614,-0.15125847,0.0048918244,0.0035666921,1.3477682,0.43057233,1.3477682,"up","ABHD2",11057,"0009611 // response to wounding // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0004091 // carboxylesterase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr15:89631380-89745591 (+) // 88.98 // q26.1"]
["11749777_s_at",0.30136108,0.18401432,0.1418848,-0.1418848,-0.20270061,-0.1758194,0.002796706,0.0016717606,1.3036486,0.382555,1.3036486,"up","TRIM16","10626 /// 147166","0032526 // response to retinoic acid // inferred from expression pattern /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0043967 // histone H4 acetylation // inferred from direct assay /// 0045618 // positive regulation of keratinocyte differentiation // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0046683 // response to organophosphorus // inferred from expression pattern /// 0048386 // positive regulation of retinoic acid receptor signaling pathway // inferred from direct assay /// 0050718 // positive regulation of interleukin-1 beta secretion // inferred from mutant phenotype /// 0060416 // response to growth hormone stimulus // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016605 // PML body // inferred from direct assay","0003677 // DNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019966 // interleukin-1 binding // inferred from physical interaction /// 0032089 // NACHT domain binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:18601310-18638980 (+) // 98.56 // p11.2 /// chr17:15531721-15587619 (-) // 96.24 // p12"]
["11736170_a_at",0.21927643,0.2592783,0.17824268,-0.17824268,-0.300272,-0.2682972,0.001395873,0.000419132,1.3830658,0.46786976,1.3830658,"up","MTMR2",8898,"0002091 // negative regulation of receptor internalization // inferred from sequence or structural similarity /// 0002091 // negative regulation of receptor internalization // inferred from electronic annotation /// 0006470 // protein dephosphorylation // non-traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0045806 // negative regulation of endocytosis // inferred from sequence or structural similarity /// 0045806 // negative regulation of endocytosis // inferred from electronic annotation /// 0046855 // inositol phosphate dephosphorylation // inferred from electronic annotation /// 0046856 // phosphatidylinositol dephosphorylation // inferred from electronic annotation /// 0051262 // protein tetramerization // inferred from electronic annotation /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from electronic annotation /// 0090394 // negative regulation of excitatory postsynaptic membrane potential // inferred from sequence or structural similarity /// 0097062 // dendritic spine maintenance // inferred from sequence or structural similarity /// 2000643 // positive regulation of early endosome to late endosome transport // inferred from sequence or structural similarity /// 2000645 // negative regulation of receptor catabolic process // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005774 // vacuolar membrane // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from sequence or structural similarity /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from sequence or structural similarity /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030424 // axon // inferred from sequence or structural similarity /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from sequence or structural similarity /// 0043197 // dendritic spine // inferred from electronic annotation /// 0097060 // synaptic membrane // inferred from sequence or structural similarity","0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // non-traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr11:95566045-95657459 (-) // 90.3 // q21"]
["11733727_s_at",0.6178632,0.6397171,0.4899702,-0.8052316,-0.4899702,-0.6893902,0.001213793,0.00027191787,2.3686213,1.2440475,2.3686213,"up","SNAP25",6616,"0001504 // neurotransmitter uptake // non-traceable author statement /// 0006112 // energy reserve metabolic process // traceable author statement /// 0007268 // synaptic transmission // non-traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // non-traceable author statement /// 0007269 // neurotransmitter secretion // traceable author statement /// 0007269 // neurotransmitter secretion // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007616 // long-term memory // inferred from electronic annotation /// 0014047 // glutamate secretion // traceable author statement /// 0016081 // synaptic vesicle docking involved in exocytosis // non-traceable author statement /// 0016197 // endosomal transport // inferred from electronic annotation /// 0030252 // growth hormone secretion // inferred from electronic annotation /// 0030431 // sleep // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046887 // positive regulation of hormone secretion // inferred from electronic annotation /// 0048791 // calcium ion-dependent exocytosis of neurotransmitter // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // traceable author statement /// 0051963 // regulation of synapse assembly // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008076 // voltage-gated potassium channel complex // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030426 // growth cone // inferred from sequence or structural similarity /// 0030426 // growth cone // inferred from electronic annotation /// 0031201 // SNARE complex // inferred from sequence or structural similarity /// 0031201 // SNARE complex // inferred from electronic annotation /// 0043005 // neuron projection // inferred from sequence or structural similarity /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043229 // intracellular organelle // inferred from electronic annotation /// 0044295 // axonal growth cone // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070032 // synaptobrevin 2-SNAP-25-syntaxin-1a-complexin I complex // inferred from electronic annotation /// 0070044 // synaptobrevin 2-SNAP-25-syntaxin-1a complex // inferred from electronic annotation","0000149 // SNARE binding // inferred from electronic annotation /// 0005249 // voltage-gated potassium channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017022 // myosin binding // inferred from electronic annotation /// 0017075 // syntaxin-1 binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from electronic annotation","chr20:10199473-10288065 (+) // 94.92 // p12.2"]
["11754735_s_at",0.44936275,0.49691248,0.59963703,-0.44936275,-0.50257635,-0.50231075,0.0006217929,3.0701834e-5,2.0000749,1.000054,2.0000749,"up","ABCA13",154664,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr7:48494659-48687092 (+) // 89.87 // p12.3"]
["11760602_s_at",0.33637667,0.18001318,0.23358917,-0.22214794,-0.23984766,-0.18001318,0.0017052562,0.0007042811,1.379357,0.46399593,1.379357,"up","LINC00337",148645,"","","","chr1:6297711-6299479 (+) // 65.73 // p36.31"]
["11724967_at",0.31697607,0.18071365,0.32742262,-0.23026705,-0.21534872,-0.18071365,0.001612635,0.00061324576,1.3984357,0.4838139,1.3984357,"up","USP31",57478,"0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation","","0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr16:23072728-23160591 (-) // 95.88 // p12.2"]
["11722737_at",0.1631136,0.18090343,0.19041634,-0.34686613,-0.1631136,-0.3396163,0.0027040783,0.0015989231,1.3768231,0.46134314,1.3768231,"up","APPL1",26060,"0006915 // apoptotic process // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0008283 // cell proliferation // inferred from direct assay /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0046324 // regulation of glucose import // inferred from mutant phenotype /// 0090003 // regulation of establishment of protein localization in plasma membrane // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred by curator /// 0005768 // endosome // inferred from electronic annotation /// 0005792 // microsome // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0010008 // endosome membrane // inferred from direct assay /// 0010008 // endosome membrane // traceable author statement /// 0012506 // vesicle membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016581 // NuRD complex // inferred from direct assay /// 0031901 // early endosome membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0043422 // protein kinase B binding // inferred from physical interaction","chr3:57261764-57307486 (+) // 93.19 // p14.3"]
["11748065_a_at",0.18893337,0.18936348,0.20319176,-0.18893337,-0.56087303,-0.28098106,0.0101254685,0.008641497,1.4513801,0.5374254,1.4513801,"up","LRRC49",54839,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation","","chr15:71184781-71342410 (+) // 95.01 // q23"]
["11721822_a_at",0.31796932,0.28362942,0.3100443,-0.6133809,-0.29934454,-0.28362942,0.004135986,0.002869419,1.6275095,0.702666,1.6275095,"up","FSD1",79187,"0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation","","chr19:4304590-4323835 (+) // 94.71 // p13.3"]
["11755143_a_at",0.23241997,0.23767233,0.17586088,-0.29822874,-0.35461235,-0.17586088,0.0019491622,0.00095120975,1.4059563,0.49155173,1.4059563,"up","BNC2",54796,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:16418578-16870841 (-) // 92.57 // p22.3"]
["11748843_a_at",0.27914143,0.3082118,0.26868057,-0.33411694,-0.3179536,-0.26868057,0.0005464768,1.3414806e-5,1.5076083,0.5922617,1.5076083,"up","USP42",84132,"0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016579 // protein deubiquitination // inferred from sequence or structural similarity /// 0016579 // protein deubiquitination // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","","0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr7:6144580-6185206 (+) // 91.67 // p22.1"]
["11743774_a_at",0.38610172,0.1846137,0.23528862,-0.1860609,-0.26817465,-0.18461418,0.0030939924,0.0019307472,1.3963087,0.48161793,1.3963087,"up","LZTFL1",54585,"","","","chr3:45865444-45883658 (-) // 98.44 // p21.31"]
["11755281_a_at",0.3382969,0.1703062,0.21272182,-0.1703062,-0.21583843,-0.19461346,0.0021648712,0.0011365107,1.351,0.43402767,1.351,"up","TGFBI","100652886 /// 100653157 /// 7045","0001525 // angiogenesis // inferred from expression pattern /// 0002062 // chondrocyte differentiation // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007162 // negative regulation of cell adhesion // traceable author statement /// 0007601 // visual perception // inferred from electronic annotation /// 0007601 // visual perception // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity","0005178 // integrin binding // traceable author statement /// 0050840 // extracellular matrix binding // inferred from electronic annotation","chr5:135364675-135399097 (+) // 92.98 // q31.1"]
["11715946_a_at",0.39034653,0.3016882,0.2959442,-0.2959442,-0.6028242,-0.5528679,0.0022762846,0.0012371538,1.7571107,0.81320506,1.7571107,"up","RALB",5899,"0000910 // cytokinesis // inferred from direct assay /// 0001928 // regulation of exocyst assembly // inferred from sequence or structural similarity /// 0001928 // regulation of exocyst assembly // inferred from electronic annotation /// 0006184 // GTP catabolic process // inferred from direct assay /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0060178 // regulation of exocyst localization // inferred from sequence or structural similarity /// 0060178 // regulation of exocyst localization // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from electronic annotation /// 0005525 // GTP binding // traceable author statement","chr2:121010333-121052286 (+) // 98.61 // q14.2"]
["11745300_a_at",0.22129774,0.26070166,0.25214148,-0.58287907,-0.22129774,-0.42938232,0.00471877,0.0034019037,1.5755986,0.6559,1.5755986,"up","DNAJC6",9829,"0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0016044 // cellular membrane organization // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005829 // cytosol // traceable author statement","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0031072 // heat shock protein binding // inferred from electronic annotation","chr1:65775217-65880952 (+) // 98.34 // p31.3"]
["11741356_a_at",0.24642467,0.18739033,0.20532131,-0.1873908,-0.4796009,-0.555316,0.0068259444,0.005450173,1.537388,0.6204813,1.537388,"up","FNDC3A",22862,"0007286 // spermatid development // inferred from electronic annotation /// 0009566 // fertilization // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0060009 // Sertoli cell development // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0012506 // vesicle membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042598 // vesicular fraction // inferred from electronic annotation","","chr13:49684437-49783915 (+) // 97.91 // q14.2"]
["11756872_a_at",0.21293259,0.24456882,0.2662387,-0.4467368,-0.21293259,-0.5565748,0.0045292554,0.003228216,1.5655411,0.6466614,1.5655411,"up","SAMD4A",23034,"0006417 // regulation of translation // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from direct assay /// 0045727 // positive regulation of translation // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0030371 // translation repressor activity // inferred from direct assay","chr14:55241679-55255846 (+) // 98.75 // q22.2"]
["11721699_a_at",0.22044563,0.16294146,0.21517849,-0.16294098,-0.26400375,-0.34665012,0.002278488,0.0012403139,1.3730525,0.4573868,1.3730525,"up","PMS1",5378,"0006200 // ATP catabolic process // not recorded /// 0006281 // DNA repair // inferred from electronic annotation /// 0006298 // mismatch repair // not recorded /// 0006298 // mismatch repair // inferred from electronic annotation /// 0006298 // mismatch repair // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007131 // reciprocal meiotic recombination // not recorded /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0032300 // mismatch repair complex // not recorded /// 0032389 // MutLalpha complex // not recorded","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // not recorded /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0016887 // ATPase activity // not recorded /// 0030983 // mismatched DNA binding // inferred from electronic annotation /// 0032407 // MutSalpha complex binding // not recorded","chr2:190648810-190742355 (+) // 97.37 // q32.2"]
["11718137_a_at",0.19544792,0.23475075,0.20542145,-0.28317642,-0.1999073,-0.19544792,0.0009735221,0.00014322254,1.3547724,0.43805057,1.3547724,"up","PDXK",8566,"0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0008283 // cell proliferation // inferred from direct assay /// 0009443 // pyridoxal 5'-phosphate salvage // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0042816 // vitamin B6 metabolic process // inferred by curator /// 0042816 // vitamin B6 metabolic process // traceable author statement /// 0042823 // pyridoxal phosphate biosynthetic process // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0008478 // pyridoxal kinase activity // inferred from direct assay /// 0008478 // pyridoxal kinase activity // traceable author statement /// 0008478 // pyridoxal kinase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from direct assay /// 0030955 // potassium ion binding // inferred from direct assay /// 0031402 // sodium ion binding // inferred from direct assay /// 0031403 // lithium ion binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr21:45138994-45182178 (+) // 91.58 // q22.3"]
["11716055_s_at",1.5825624,1.372087,1.4745116,-2.2059553,-1.3720865,-1.8332522,0.0010772275,0.00019092223,9.7145815,3.2801518,9.7145815,"up","STMN3",50861,"0007399 // nervous system development // traceable author statement /// 0031122 // cytoplasmic microtubule organization // inferred from sequence or structural similarity /// 0031122 // cytoplasmic microtubule organization // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0031175 // neuron projection development // inferred from electronic annotation /// 0032314 // regulation of Rac GTPase activity // inferred from sequence or structural similarity /// 0032314 // regulation of Rac GTPase activity // inferred from electronic annotation /// 0035021 // negative regulation of Rac protein signal transduction // inferred from sequence or structural similarity /// 0035021 // negative regulation of Rac protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0051493 // regulation of cytoskeleton organization // inferred from sequence or structural similarity /// 0051493 // regulation of cytoskeleton organization // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0019904 // protein domain specific binding // inferred from sequence or structural similarity /// 0019904 // protein domain specific binding // inferred from electronic annotation","chr20:62271062-62285400 (-) // 86.44 // q13.33"]
["11758151_s_at",0.33529186,0.29099655,0.19927979,-0.19927979,-0.2759447,-0.27573872,0.001350818,0.00037929945,1.4394428,0.52551043,1.4394428,"up","RNASEH2A",10535,"0006260 // DNA replication // traceable author statement /// 0006401 // RNA catabolic process // inferred from direct assay /// 0006401 // RNA catabolic process // traceable author statement /// 0016070 // RNA metabolic process // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0032299 // ribonuclease H2 complex // inferred from direct assay /// 0032299 // ribonuclease H2 complex // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0004523 // ribonuclease H activity // inferred from direct assay /// 0004523 // ribonuclease H activity // inferred from electronic annotation /// 0004540 // ribonuclease activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:12918231-12924302 (+) // 94.96 // p13.2"]
["11731867_a_at",0.13793755,0.18435907,0.12192869,-0.35739422,-0.12192869,-0.30948544,0.0065826094,0.005204854,1.3296175,0.41101122,1.3296175,"up","BICD2",23299,"0006810 // transport // inferred from electronic annotation /// 0072385 // minus-end-directed organelle transport along microtubule // inferred from sequence or structural similarity /// 0072393 // microtubule anchoring at microtubule organizing center // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from sequence or structural similarity","0005515 // protein binding // inferred from physical interaction /// 0017137 // Rab GTPase binding // inferred from sequence or structural similarity","chr9:95473645-95527083 (-) // 98.56 // q22.31"]
["11718230_a_at",0.18271351,0.258049,0.27590847,-0.34714603,-0.18271351,-0.3404789,0.0019608224,0.0009638956,1.4429318,0.52900314,1.4429318,"up","HLA-F",3134,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // inferred from electronic annotation /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002480 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0050776 // regulation of immune response // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0031901 // early endosome membrane // traceable author statement /// 0042612 // MHC class I protein complex // inferred from electronic annotation /// 0071556 // integral to lumenal side of endoplasmic reticulum membrane // traceable author statement","0032393 // MHC class I receptor activity // traceable author statement","chr6:29691060-29694303 (+) // 95.16 // p22.1"]
["11739199_a_at",0.27639103,0.20166111,0.20836353,-0.20166111,-0.21873188,-0.21929741,0.00070557836,5.6046676e-5,1.3585196,0.44203538,1.3585196,"up","TMEM106C",79022,"","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:48357329-48362661 (+) // 94.42 // q13.11"]
["11743923_at",0.194767,0.18173695,0.12644386,-0.12644386,-0.3278203,-0.42752075,0.008553791,0.007117108,1.3770468,0.46157756,1.3770468,"up","TCFL5","100132911 /// 10732","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from expression pattern /// 0007283 // spermatogenesis // inferred from sequence or structural similarity /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from expression pattern /// 0042127 // regulation of cell proliferation // inferred from sequence or structural similarity /// 0045595 // regulation of cell differentiation // inferred from expression pattern /// 0045595 // regulation of cell differentiation // inferred from sequence or structural similarity","0001673 // male germ cell nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:61472365-61493115 (-) // 87.59 // q13.33"]
["11742838_at",0.45020294,0.31670904,0.19834661,-0.25701284,-0.32685757,-0.19834661,0.0032341068,0.0020446463,1.4974334,0.5824919,1.4974334,"up","ARRB1",408,"0002031 // G-protein coupled receptor internalization // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007219 // Notch signaling pathway // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0016567 // protein ubiquitination // inferred from mutant phenotype /// 0030168 // platelet activation // traceable author statement /// 0031397 // negative regulation of protein ubiquitination // inferred from direct assay /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0032715 // negative regulation of interleukin-6 production // inferred from direct assay /// 0032717 // negative regulation of interleukin-8 production // inferred from direct assay /// 0035025 // positive regulation of Rho protein signal transduction // inferred from mutant phenotype /// 0035066 // positive regulation of histone acetylation // inferred from mutant phenotype /// 0043086 // negative regulation of catalytic activity // traceable author statement /// 0043149 // stress fiber assembly // inferred from mutant phenotype /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0043547 // positive regulation of GTPase activity // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0090240 // positive regulation of histone H4 acetylation // inferred from mutant phenotype","0000139 // Golgi membrane // traceable author statement /// 0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005765 // lysosomal membrane // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005834 // heterotrimeric G-protein complex // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0031143 // pseudopodium // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0004402 // histone acetyltransferase activity // inferred from direct assay /// 0004857 // enzyme inhibitor activity // traceable author statement /// 0005096 // GTPase activator activity // inferred from mutant phenotype /// 0005159 // insulin-like growth factor receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0031701 // angiotensin receptor binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from mutant phenotype","chr11:74976173-75062946 (-) // 96.79 // q13.4"]
["11717215_a_at",0.28577328,0.21957684,0.19219589,-0.19219589,-0.24047089,-0.27493,0.0011213787,0.00021732146,1.3835559,0.46838093,1.3835559,"up","ATP9A",10079,"0006812 // cation transport // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0015914 // phospholipid transport // inferred from electronic annotation /// 0045332 // phospholipid translocation // non-traceable author statement","0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0055037 // recycling endosome // inferred from direct assay /// 0055037 // recycling endosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004012 // phospholipid-translocating ATPase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:50212706-50384908 (-) // 96.64 // q13.2"]
["11726521_a_at",0.43546677,0.27099895,0.34144592,-0.36681652,-0.27099848,-0.4301648,0.0014306394,0.00044494102,1.6304804,0.7052971,1.6304804,"up","SPATA17",128153,"","0005737 // cytoplasm // inferred from electronic annotation","0005516 // calmodulin binding // inferred from electronic annotation","chr1:217804665-218040486 (+) // 97.76 // q41"]
["11753906_x_at",0.25974512,0.20811176,0.34962463,-0.25999498,-0.20811129,-0.21373653,0.0013199523,0.0003577859,1.4139928,0.49977475,1.4139928,"up","SMARCA1",6594,"0006338 // chromatin remodeling // inferred from direct assay /// 0006338 // chromatin remodeling // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007420 // brain development // inferred from mutant phenotype /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from sequence or structural similarity /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0043044 // ATP-dependent chromatin remodeling // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0016585 // chromatin remodeling complex // inferred from electronic annotation /// 0016589 // NURF complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0004386 // helicase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008094 // DNA-dependent ATPase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016817 // hydrolase activity, acting on acid anhydrides // inferred from electronic annotation /// 0016818 // hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides // inferred from electronic annotation /// 0031491 // nucleosome binding // inferred from electronic annotation","chrX:128580732-128657382 (-) // 97.27 // q25"]
["11757000_a_at",0.15250778,0.2936344,0.22934628,-0.16757011,-0.17516899,-0.15250778,0.0017035499,0.00070178014,1.310616,0.3902451,1.310616,"up","STYXL1",51657,"0006470 // protein dephosphorylation // not recorded /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0035556 // intracellular signal transduction // traceable author statement","0005622 // intracellular // traceable author statement","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // not recorded /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr7:75625674-75659823 (-) // 99.74 // q11.23"]
["11738060_s_at",0.28587437,0.22888947,0.19921875,-0.24988079,-0.19921875,-0.43047953,0.0032469141,0.0020611333,1.4451178,0.5311872,1.4451178,"up","HIST1H4L","121504 /// 554313 /// 8294 /// 8359 /// 8360 /// 8361 /// 8362 /// 8363 /// 8364 /// 8365 /// 8366 /// 8367 /// 8368 /// 8370","0000723 // telomere maintenance // traceable author statement /// 0006325 // chromatin organization // non-traceable author statement /// 0006334 // nucleosome assembly // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0045653 // negative regulation of megakaryocyte differentiation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement","0000786 // nucleosome // traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26285354-26285727 (-) // 99.47 // p22.2"]
["11750980_a_at",0.2731228,0.30264568,0.27480412,-0.30002832,-0.27312326,-0.32563448,0.00038672079,5.3294852e-6,1.498085,0.5831195,1.498085,"up","ARFGAP3",26286,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // non-traceable author statement /// 0009306 // protein secretion // inferred from expression pattern /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // non-traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0032312 // regulation of ARF GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005622 // intracellular // non-traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0008060 // ARF GTPase activator activity // inferred from direct assay /// 0008060 // ARF GTPase activator activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008565 // protein transporter activity // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr22:43193221-43253268 (-) // 95.96 // q13.2"]
["11738060_s_at",0.28587437,0.22888947,0.19921875,-0.24988079,-0.19921875,-0.43047953,0.0032469141,0.0020611333,1.4451178,0.5311872,1.4451178,"up","HIST1H4K","121504 /// 554313 /// 8294 /// 8359 /// 8360 /// 8361 /// 8362 /// 8363 /// 8364 /// 8365 /// 8366 /// 8367 /// 8368 /// 8370","0000723 // telomere maintenance // traceable author statement /// 0006325 // chromatin organization // non-traceable author statement /// 0006334 // nucleosome assembly // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0045653 // negative regulation of megakaryocyte differentiation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement","0000786 // nucleosome // traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26285354-26285727 (-) // 99.47 // p22.2"]
["11715639_a_at",0.1812725,0.15034103,0.18615627,-0.15034103,-0.1976347,-0.27766514,0.0016010772,0.0006029755,1.3023678,0.3811369,1.3023678,"up","TTC3","286495 /// 7267","0006511 // ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0010771 // negative regulation of cell morphogenesis involved in differentiation // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005773 // vacuole // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr21:38121747-38575408 (+) // 77.26 // q22.13"]
["11739868_a_at",0.47047663,0.23135757,0.19667625,-0.21065998,-0.19667625,-0.26637268,0.0054514054,0.0041014664,1.4380094,0.5240731,1.4380094,"up","ATF2",1386,"0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0003151 // outflow tract morphogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred by curator /// 0006366 // transcription from RNA polymerase II promoter // inferred by curator /// 0006970 // response to osmotic stress // inferred from direct assay /// 0008063 // Toll signaling pathway // traceable author statement /// 0032915 // positive regulation of transforming growth factor beta2 production // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0060612 // adipose tissue development // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay","0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0001076 // RNA polymerase II transcription factor binding transcription factor activity // inferred by curator /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0001102 // RNA polymerase II activating transcription factor binding // inferred from physical interaction /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred by curator /// 0003713 // transcription coactivator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008140 // cAMP response element binding protein binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0035497 // cAMP response element binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr2:175939007-176032924 (-) // 97.54 // q31.1"]
["11718241_a_at",0.5186243,0.37541914,0.4877696,-0.3803668,-0.37541962,-0.45260048,0.0007367552,6.681752e-5,1.8193208,0.8634,1.8193208,"up","PRUNE2",158471,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from mutant phenotype /// 0051318 // G1 phase // inferred from expression pattern","0005737 // cytoplasm // inferred from electronic annotation","0016462 // pyrophosphatase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:79226292-79521136 (-) // 97.03 // q21.2"]
["11738060_s_at",0.28587437,0.22888947,0.19921875,-0.24988079,-0.19921875,-0.43047953,0.0032469141,0.0020611333,1.4451178,0.5311872,1.4451178,"up","HIST1H4A","121504 /// 554313 /// 8294 /// 8359 /// 8360 /// 8361 /// 8362 /// 8363 /// 8364 /// 8365 /// 8366 /// 8367 /// 8368 /// 8370","0000723 // telomere maintenance // traceable author statement /// 0006325 // chromatin organization // non-traceable author statement /// 0006334 // nucleosome assembly // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0045653 // negative regulation of megakaryocyte differentiation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement","0000786 // nucleosome // traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26285354-26285727 (-) // 99.47 // p22.2"]
["11738060_s_at",0.28587437,0.22888947,0.19921875,-0.24988079,-0.19921875,-0.43047953,0.0032469141,0.0020611333,1.4451178,0.5311872,1.4451178,"up","HIST1H4B","121504 /// 554313 /// 8294 /// 8359 /// 8360 /// 8361 /// 8362 /// 8363 /// 8364 /// 8365 /// 8366 /// 8367 /// 8368 /// 8370","0000723 // telomere maintenance // traceable author statement /// 0006325 // chromatin organization // non-traceable author statement /// 0006334 // nucleosome assembly // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0045653 // negative regulation of megakaryocyte differentiation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement","0000786 // nucleosome // traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26285354-26285727 (-) // 99.47 // p22.2"]
["11750027_a_at",0.22037792,0.23691463,0.16140652,-0.2844386,-0.16140652,-0.28106642,0.0016394282,0.0006460279,1.3646556,0.44853687,1.3646556,"up","SLC35F2",54733,"0006810 // transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:107663323-107729534 (-) // 100.0 // q22.3"]
["11738060_s_at",0.28587437,0.22888947,0.19921875,-0.24988079,-0.19921875,-0.43047953,0.0032469141,0.0020611333,1.4451178,0.5311872,1.4451178,"up","HIST1H4E","121504 /// 554313 /// 8294 /// 8359 /// 8360 /// 8361 /// 8362 /// 8363 /// 8364 /// 8365 /// 8366 /// 8367 /// 8368 /// 8370","0000723 // telomere maintenance // traceable author statement /// 0006325 // chromatin organization // non-traceable author statement /// 0006334 // nucleosome assembly // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0045653 // negative regulation of megakaryocyte differentiation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement","0000786 // nucleosome // traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26285354-26285727 (-) // 99.47 // p22.2"]
["11738060_s_at",0.28587437,0.22888947,0.19921875,-0.24988079,-0.19921875,-0.43047953,0.0032469141,0.0020611333,1.4451178,0.5311872,1.4451178,"up","HIST1H4F","121504 /// 554313 /// 8294 /// 8359 /// 8360 /// 8361 /// 8362 /// 8363 /// 8364 /// 8365 /// 8366 /// 8367 /// 8368 /// 8370","0000723 // telomere maintenance // traceable author statement /// 0006325 // chromatin organization // non-traceable author statement /// 0006334 // nucleosome assembly // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0045653 // negative regulation of megakaryocyte differentiation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement","0000786 // nucleosome // traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26285354-26285727 (-) // 99.47 // p22.2"]
["11738263_s_at",0.23723745,0.28707123,0.13931465,-0.20389462,-0.15677404,-0.13931465,0.0022657276,0.001223802,1.3084592,0.38786888,1.3084592,"up","AUTS2",26053,"","","","chr7:69063420-69755606 (+) // 86.36 // q11.22"]
["11738060_s_at",0.28587437,0.22888947,0.19921875,-0.24988079,-0.19921875,-0.43047953,0.0032469141,0.0020611333,1.4451178,0.5311872,1.4451178,"up","HIST1H4C","121504 /// 554313 /// 8294 /// 8359 /// 8360 /// 8361 /// 8362 /// 8363 /// 8364 /// 8365 /// 8366 /// 8367 /// 8368 /// 8370","0000723 // telomere maintenance // traceable author statement /// 0006325 // chromatin organization // non-traceable author statement /// 0006334 // nucleosome assembly // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0045653 // negative regulation of megakaryocyte differentiation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement","0000786 // nucleosome // traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26285354-26285727 (-) // 99.47 // p22.2"]
["11738060_s_at",0.28587437,0.22888947,0.19921875,-0.24988079,-0.19921875,-0.43047953,0.0032469141,0.0020611333,1.4451178,0.5311872,1.4451178,"up","HIST1H4D","121504 /// 554313 /// 8294 /// 8359 /// 8360 /// 8361 /// 8362 /// 8363 /// 8364 /// 8365 /// 8366 /// 8367 /// 8368 /// 8370","0000723 // telomere maintenance // traceable author statement /// 0006325 // chromatin organization // non-traceable author statement /// 0006334 // nucleosome assembly // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0045653 // negative regulation of megakaryocyte differentiation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement","0000786 // nucleosome // traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26285354-26285727 (-) // 99.47 // p22.2"]
["11738060_s_at",0.28587437,0.22888947,0.19921875,-0.24988079,-0.19921875,-0.43047953,0.0032469141,0.0020611333,1.4451178,0.5311872,1.4451178,"up","HIST1H4I","121504 /// 554313 /// 8294 /// 8359 /// 8360 /// 8361 /// 8362 /// 8363 /// 8364 /// 8365 /// 8366 /// 8367 /// 8368 /// 8370","0000723 // telomere maintenance // traceable author statement /// 0006325 // chromatin organization // non-traceable author statement /// 0006334 // nucleosome assembly // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0045653 // negative regulation of megakaryocyte differentiation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement","0000786 // nucleosome // traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26285354-26285727 (-) // 99.47 // p22.2"]
["11717900_at",0.24262428,0.19909859,0.17754269,-0.17754269,-0.25414848,-0.17959976,0.001091852,0.00020435949,1.3288567,0.41018552,1.3288567,"up","ASF1B",55723,"0006333 // chromatin assembly or disassembly // inferred from electronic annotation /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0042393 // histone binding // inferred from electronic annotation","chr19:14230323-14248127 (-) // 97.14 // p13.12"]
["11738060_s_at",0.28587437,0.22888947,0.19921875,-0.24988079,-0.19921875,-0.43047953,0.0032469141,0.0020611333,1.4451178,0.5311872,1.4451178,"up","HIST1H4J","121504 /// 554313 /// 8294 /// 8359 /// 8360 /// 8361 /// 8362 /// 8363 /// 8364 /// 8365 /// 8366 /// 8367 /// 8368 /// 8370","0000723 // telomere maintenance // traceable author statement /// 0006325 // chromatin organization // non-traceable author statement /// 0006334 // nucleosome assembly // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0045653 // negative regulation of megakaryocyte differentiation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement","0000786 // nucleosome // traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26285354-26285727 (-) // 99.47 // p22.2"]
["11738060_s_at",0.28587437,0.22888947,0.19921875,-0.24988079,-0.19921875,-0.43047953,0.0032469141,0.0020611333,1.4451178,0.5311872,1.4451178,"up","HIST1H4H","121504 /// 554313 /// 8294 /// 8359 /// 8360 /// 8361 /// 8362 /// 8363 /// 8364 /// 8365 /// 8366 /// 8367 /// 8368 /// 8370","0000723 // telomere maintenance // traceable author statement /// 0006325 // chromatin organization // non-traceable author statement /// 0006334 // nucleosome assembly // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0045653 // negative regulation of megakaryocyte differentiation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement","0000786 // nucleosome // traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26285354-26285727 (-) // 99.47 // p22.2"]
["11741186_at",0.4046936,0.32256794,0.30598354,-0.30598354,-0.3142252,-0.34846592,0.0006672249,3.6048226e-5,1.5881053,0.6673066,1.5881053,"up","HIST1H3J","8350 /// 8351 /// 8352 /// 8353 /// 8354 /// 8355 /// 8356 /// 8357 /// 8358 /// 8968","0006334 // nucleosome assembly // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0051320 // S phase // non-traceable author statement /// 0060968 // regulation of gene silencing // inferred from direct assay","0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26196982-26199521 (-) // 77.41 // p22.2"]
["11732548_a_at",1.2753935,0.2847495,0.40278387,-0.35021257,-0.40144014,-0.2847495,0.03464406,0.033480305,1.99969,0.99977636,1.99969,"up","MYO1A",4640,"0007605 // sensory perception of sound // inferred from mutant phenotype /// 0030030 // cell projection organization // inferred from electronic annotation /// 0030033 // microvillus assembly // inferred from electronic annotation /// 0051648 // vesicle localization // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005902 // microvillus // inferred from direct assay /// 0005902 // microvillus // inferred from electronic annotation /// 0005903 // brush border // inferred from direct assay /// 0005903 // brush border // inferred from electronic annotation /// 0009925 // basal plasma membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0016328 // lateral plasma membrane // inferred from direct assay /// 0016328 // lateral plasma membrane // inferred from electronic annotation /// 0016459 // myosin complex // inferred from electronic annotation /// 0030864 // cortical actin cytoskeleton // inferred from direct assay /// 0031941 // filamentous actin // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation","chr12:57422301-57443892 (-) // 98.23 // q13.3"]
["11733690_s_at",0.15404415,0.2177496,0.21042252,-0.1540432,-0.28518295,-0.22974014,0.0016202792,0.00063287246,1.3352046,0.41706085,1.3352046,"up","SEC11A",23478,"0006112 // energy reserve metabolic process // traceable author statement /// 0006412 // translation // traceable author statement /// 0006465 // signal peptide processing // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr15:85212774-85259674 (-) // 94.13 // q25.3"]
["11718068_at",0.15103626,0.18579578,0.1536541,-0.15103626,-0.25171185,-0.3031988,0.001979921,0.0009788757,1.3184209,0.398811,1.3184209,"up","MYO1E",4643,"0001570 // vasculogenesis // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0003094 // glomerular filtration // inferred from sequence or structural similarity /// 0003094 // glomerular filtration // inferred from electronic annotation /// 0006807 // nitrogen compound metabolic process // inferred from electronic annotation /// 0006897 // endocytosis // inferred from mutant phenotype /// 0030048 // actin filament-based movement // traceable author statement /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0032836 // glomerular basement membrane development // inferred from sequence or structural similarity /// 0032836 // glomerular basement membrane development // inferred from electronic annotation /// 0035166 // post-embryonic hemopoiesis // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0072015 // glomerular visceral epithelial cell development // inferred from sequence or structural similarity /// 0072015 // glomerular visceral epithelial cell development // inferred from electronic annotation","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from sequence or structural similarity /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005912 // adherens junction // inferred from sequence or structural similarity /// 0005912 // adherens junction // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0016459 // myosin complex // traceable author statement /// 0016459 // myosin complex // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045334 // clathrin-coated endocytic vesicle // inferred from direct assay","0000146 // microfilament motor activity // traceable author statement /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // traceable author statement /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from direct assay /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from direct assay /// 0042623 // ATPase activity, coupled // inferred from direct assay /// 0042623 // ATPase activity, coupled // traceable author statement /// 0051015 // actin filament binding // inferred from direct assay","chr15:59428168-59665139 (-) // 92.26 // q22.2"]
["11716408_a_at",0.33119488,0.28111172,0.3808279,-0.32506084,-0.28111172,-0.38975334,0.0008691947,0.00010051858,1.5833938,0.66302013,1.5833938,"up","MET",4233,"0000187 // activation of MAPK activity // inferred from electronic annotation /// 0001101 // response to acid // inferred from electronic annotation /// 0001764 // neuron migration // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0001890 // placenta development // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007166 // cell surface receptor signaling pathway // non-traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007420 // brain development // inferred from electronic annotation /// 0007517 // muscle organ development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0007569 // cell aging // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008584 // male gonad development // inferred from electronic annotation /// 0009611 // response to wounding // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010800 // positive regulation of peptidyl-threonine phosphorylation // inferred from electronic annotation /// 0010801 // negative regulation of peptidyl-threonine phosphorylation // inferred from electronic annotation /// 0010828 // positive regulation of glucose transport // inferred from electronic annotation /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0014003 // oligodendrocyte development // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014812 // muscle cell migration // inferred from electronic annotation /// 0014902 // myotube differentiation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0021953 // central nervous system neuron differentiation // inferred from electronic annotation /// 0030317 // sperm motility // inferred from electronic annotation /// 0030534 // adult behavior // inferred from electronic annotation /// 0031016 // pancreas development // inferred from electronic annotation /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0045840 // positive regulation of mitosis // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048012 // hepatocyte growth factor receptor signaling pathway // traceable author statement /// 0048012 // hepatocyte growth factor receptor signaling pathway // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from mutant phenotype /// 0050775 // positive regulation of dendrite morphogenesis // inferred from electronic annotation /// 0051450 // myoblast proliferation // inferred from electronic annotation /// 0060665 // regulation of branching involved in salivary gland morphogenesis by mesenchymal-epithelial signaling // inferred from electronic annotation /// 0071241 // cellular response to inorganic substance // inferred from electronic annotation /// 0071243 // cellular response to arsenic-containing substance // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0071354 // cellular response to interleukin-6 // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0071375 // cellular response to peptide hormone stimulus // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009925 // basal plasma membrane // inferred from direct assay /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019861 // flagellum // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0060076 // excitatory synapse // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // non-traceable author statement /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005008 // hepatocyte growth factor-activated receptor activity // traceable author statement /// 0005008 // hepatocyte growth factor-activated receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008013 // beta-catenin binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0043274 // phospholipase binding // inferred from electronic annotation /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr7:116312458-116438433 (+) // 94.38 // q31.2"]
["11717803_a_at",0.25677586,0.412776,0.3369074,-0.36027002,-0.28775358,-0.25677538,0.0012443048,0.0003059854,1.5551848,0.63708603,1.5551848,"up","NTN4",59277,"0007411 // axon guidance // traceable author statement /// 0016322 // neuron remodeling // inferred from electronic annotation /// 0060668 // regulation of branching involved in salivary gland morphogenesis by extracellular matrix-epithelial cell signaling // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement","0043237 // laminin-1 binding // inferred from electronic annotation","chr12:96051582-96184593 (-) // 98.47 // q22"]
["11724122_a_at",0.40561485,0.28231525,0.35057735,-0.3277855,-0.28231525,-0.33448696,0.0007584205,7.283711e-5,1.581213,0.6610317,1.581213,"up","SLC35G2",80723,"","0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:136537860-136574734 (+) // 95.95 // q22.3"]
["11741186_at",0.4046936,0.32256794,0.30598354,-0.30598354,-0.3142252,-0.34846592,0.0006672249,3.6048226e-5,1.5881053,0.6673066,1.5881053,"up","HIST1H3A","8350 /// 8351 /// 8352 /// 8353 /// 8354 /// 8355 /// 8356 /// 8357 /// 8358 /// 8968","0006334 // nucleosome assembly // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0051320 // S phase // non-traceable author statement /// 0060968 // regulation of gene silencing // inferred from direct assay","0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26196982-26199521 (-) // 77.41 // p22.2"]
["11756384_a_at",0.19810247,0.3822589,0.16441965,-0.23691177,-0.2200613,-0.16441965,0.004360689,0.003061121,1.3711545,0.45539123,1.3711545,"up","IKBKG",8517,"0000187 // activation of MAPK activity // traceable author statement /// 0001782 // B cell homeostasis // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0006955 // immune response // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0007249 // I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0007250 // activation of NF-kappaB-inducing kinase activity // inferred from electronic annotation /// 0007254 // JNK cascade // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0009615 // response to virus // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0050852 // T cell receptor signaling pathway // non-traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement","0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0008385 // IkappaB kinase complex // traceable author statement /// 0044444 // cytoplasmic part // inferred from direct assay","0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:153775561-153786866 (+) // 83.04 // q28"]
["11741186_at",0.4046936,0.32256794,0.30598354,-0.30598354,-0.3142252,-0.34846592,0.0006672249,3.6048226e-5,1.5881053,0.6673066,1.5881053,"up","HIST1H3B","8350 /// 8351 /// 8352 /// 8353 /// 8354 /// 8355 /// 8356 /// 8357 /// 8358 /// 8968","0006334 // nucleosome assembly // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0051320 // S phase // non-traceable author statement /// 0060968 // regulation of gene silencing // inferred from direct assay","0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26196982-26199521 (-) // 77.41 // p22.2"]
["11741186_at",0.4046936,0.32256794,0.30598354,-0.30598354,-0.3142252,-0.34846592,0.0006672249,3.6048226e-5,1.5881053,0.6673066,1.5881053,"up","HIST1H3C","8350 /// 8351 /// 8352 /// 8353 /// 8354 /// 8355 /// 8356 /// 8357 /// 8358 /// 8968","0006334 // nucleosome assembly // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0051320 // S phase // non-traceable author statement /// 0060968 // regulation of gene silencing // inferred from direct assay","0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26196982-26199521 (-) // 77.41 // p22.2"]
["11741186_at",0.4046936,0.32256794,0.30598354,-0.30598354,-0.3142252,-0.34846592,0.0006672249,3.6048226e-5,1.5881053,0.6673066,1.5881053,"up","HIST1H3D","8350 /// 8351 /// 8352 /// 8353 /// 8354 /// 8355 /// 8356 /// 8357 /// 8358 /// 8968","0006334 // nucleosome assembly // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0051320 // S phase // non-traceable author statement /// 0060968 // regulation of gene silencing // inferred from direct assay","0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26196982-26199521 (-) // 77.41 // p22.2"]
["11741186_at",0.4046936,0.32256794,0.30598354,-0.30598354,-0.3142252,-0.34846592,0.0006672249,3.6048226e-5,1.5881053,0.6673066,1.5881053,"up","HIST1H3E","8350 /// 8351 /// 8352 /// 8353 /// 8354 /// 8355 /// 8356 /// 8357 /// 8358 /// 8968","0006334 // nucleosome assembly // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0051320 // S phase // non-traceable author statement /// 0060968 // regulation of gene silencing // inferred from direct assay","0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26196982-26199521 (-) // 77.41 // p22.2"]
["11741186_at",0.4046936,0.32256794,0.30598354,-0.30598354,-0.3142252,-0.34846592,0.0006672249,3.6048226e-5,1.5881053,0.6673066,1.5881053,"up","HIST1H3F","8350 /// 8351 /// 8352 /// 8353 /// 8354 /// 8355 /// 8356 /// 8357 /// 8358 /// 8968","0006334 // nucleosome assembly // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0051320 // S phase // non-traceable author statement /// 0060968 // regulation of gene silencing // inferred from direct assay","0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26196982-26199521 (-) // 77.41 // p22.2"]
["11741186_at",0.4046936,0.32256794,0.30598354,-0.30598354,-0.3142252,-0.34846592,0.0006672249,3.6048226e-5,1.5881053,0.6673066,1.5881053,"up","HIST1H3G","8350 /// 8351 /// 8352 /// 8353 /// 8354 /// 8355 /// 8356 /// 8357 /// 8358 /// 8968","0006334 // nucleosome assembly // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0051320 // S phase // non-traceable author statement /// 0060968 // regulation of gene silencing // inferred from direct assay","0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26196982-26199521 (-) // 77.41 // p22.2"]
["11727671_a_at",0.32369423,0.22560167,0.35551023,-0.6846194,-0.30461073,-0.22560167,0.010089653,0.008603579,1.6318924,0.70654595,1.6318924,"up","SYT17",51760,"0006810 // transport // inferred from electronic annotation","0005802 // trans-Golgi network // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation","chr16:19179534-19279656 (+) // 91.6 // p12.3"]
["11741186_at",0.4046936,0.32256794,0.30598354,-0.30598354,-0.3142252,-0.34846592,0.0006672249,3.6048226e-5,1.5881053,0.6673066,1.5881053,"up","HIST1H3H","8350 /// 8351 /// 8352 /// 8353 /// 8354 /// 8355 /// 8356 /// 8357 /// 8358 /// 8968","0006334 // nucleosome assembly // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0051320 // S phase // non-traceable author statement /// 0060968 // regulation of gene silencing // inferred from direct assay","0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26196982-26199521 (-) // 77.41 // p22.2"]
["11716330_a_at",0.6930747,0.70113325,0.3941121,-0.45837116,-0.5624585,-0.3941121,0.0016760693,0.00068303355,2.0961676,1.067754,2.0961676,"up","DNAJB6",10049,"0006457 // protein folding // inferred from direct assay /// 0006457 // protein folding // inferred from electronic annotation /// 0006986 // response to unfolded protein // non-traceable author statement /// 0032781 // positive regulation of ATPase activity // inferred from direct assay /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0045109 // intermediate filament organization // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0060710 // chorio-allantoic fusion // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030018 // Z disc // inferred from direct assay /// 0030018 // Z disc // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0001671 // ATPase activator activity // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031072 // heat shock protein binding // inferred from direct assay /// 0031072 // heat shock protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from direct assay","chr7:157129709-157210133 (+) // 92.93 // q36.3"]
["11741186_at",0.4046936,0.32256794,0.30598354,-0.30598354,-0.3142252,-0.34846592,0.0006672249,3.6048226e-5,1.5881053,0.6673066,1.5881053,"up","HIST1H3I","8350 /// 8351 /// 8352 /// 8353 /// 8354 /// 8355 /// 8356 /// 8357 /// 8358 /// 8968","0006334 // nucleosome assembly // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0051320 // S phase // non-traceable author statement /// 0060968 // regulation of gene silencing // inferred from direct assay","0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26196982-26199521 (-) // 77.41 // p22.2"]
["11723878_a_at",0.62828064,0.49782133,0.3734312,-0.50224495,-0.37786627,-0.3734312,0.0013953822,0.00041416503,1.8890905,0.9176919,1.8890905,"up","ATP7B",540,"0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006825 // copper ion transport // inferred from genetic interaction /// 0006825 // copper ion transport // inferred from electronic annotation /// 0006878 // cellular copper ion homeostasis // traceable author statement /// 0006878 // cellular copper ion homeostasis // inferred from electronic annotation /// 0006882 // cellular zinc ion homeostasis // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0015677 // copper ion import // inferred from direct assay /// 0015680 // intracellular copper ion transport // inferred from electronic annotation /// 0030001 // metal ion transport // inferred from electronic annotation /// 0034220 // ion transmembrane transport // traceable author statement /// 0046034 // ATP metabolic process // inferred from electronic annotation /// 0046688 // response to copper ion // inferred from direct assay /// 0051208 // sequestering of calcium ion // inferred from direct assay /// 0055085 // transmembrane transport // traceable author statement /// 0060003 // copper ion export // non-traceable author statement /// 0060003 // copper ion export // traceable author statement /// 0060003 // copper ion export // inferred from electronic annotation","0000139 // Golgi membrane // traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004008 // copper-exporting ATPase activity // non-traceable author statement /// 0004008 // copper-exporting ATPase activity // traceable author statement /// 0004008 // copper-exporting ATPase activity // inferred from electronic annotation /// 0005507 // copper ion binding // inferred from direct assay /// 0005507 // copper ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0043682 // copper-transporting ATPase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr13:52506809-52586201 (-) // 96.94 // q14.3"]
["11750582_a_at",0.66803503,0.34581614,0.2560315,-0.2560315,-0.34664392,-0.3063407,0.0060592825,0.0047327504,1.6543902,0.7262996,1.6543902,"up","HDAC6",10013,"0000209 // protein polyubiquitination // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006476 // protein deacetylation // inferred from mutant phenotype /// 0006476 // protein deacetylation // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006515 // misfolded or incompletely synthesized protein catabolic process // inferred from mutant phenotype /// 0006886 // intracellular protein transport // inferred from mutant phenotype /// 0006914 // autophagy // inferred from electronic annotation /// 0007026 // negative regulation of microtubule depolymerization // inferred from electronic annotation /// 0009636 // response to toxin // inferred from mutant phenotype /// 0009967 // positive regulation of signal transduction // inferred from mutant phenotype /// 0010033 // response to organic substance // inferred from mutant phenotype /// 0010469 // regulation of receptor activity // inferred from mutant phenotype /// 0010634 // positive regulation of epithelial cell migration // inferred from mutant phenotype /// 0010727 // negative regulation of hydrogen peroxide metabolic process // inferred by curator /// 0010870 // positive regulation of receptor biosynthetic process // inferred from mutant phenotype /// 0016236 // macroautophagy // inferred from mutant phenotype /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016575 // histone deacetylation // inferred from direct assay /// 0016575 // histone deacetylation // inferred from sequence or structural similarity /// 0016575 // histone deacetylation // inferred from electronic annotation /// 0032418 // lysosome localization // inferred from mutant phenotype /// 0034983 // peptidyl-lysine deacetylation // inferred from mutant phenotype /// 0035967 // cellular response to topologically incorrect protein // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043162 // ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway // inferred from electronic annotation /// 0043242 // negative regulation of protein complex disassembly // inferred from mutant phenotype /// 0045861 // negative regulation of proteolysis // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0051354 // negative regulation of oxidoreductase activity // inferred by curator /// 0051788 // response to misfolded protein // inferred from mutant phenotype /// 0060632 // regulation of microtubule-based movement // inferred by curator /// 0060765 // regulation of androgen receptor signaling pathway // traceable author statement /// 0070301 // cellular response to hydrogen peroxide // inferred from mutant phenotype /// 0070842 // aggresome assembly // inferred from mutant phenotype /// 0070842 // aggresome assembly // inferred from electronic annotation /// 0070845 // polyubiquitinated misfolded protein transport // inferred from mutant phenotype /// 0070846 // Hsp90 deacetylation // inferred from mutant phenotype /// 0070846 // Hsp90 deacetylation // inferred from electronic annotation /// 0070848 // response to growth factor stimulus // inferred from mutant phenotype /// 0071218 // cellular response to misfolded protein // inferred from electronic annotation /// 0090035 // positive regulation of chaperone-mediated protein complex assembly // inferred from mutant phenotype /// 0090042 // tubulin deacetylation // inferred from direct assay /// 0090042 // tubulin deacetylation // inferred from sequence or structural similarity /// 0090042 // tubulin deacetylation // inferred from electronic annotation","0000118 // histone deacetylase complex // inferred from direct assay /// 0005622 // intracellular // inferred from mutant phenotype /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005875 // microtubule associated complex // inferred from direct assay /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation /// 0005901 // caveola // inferred from direct assay /// 0016234 // inclusion body // inferred from direct assay /// 0016235 // aggresome // inferred from direct assay /// 0030286 // dynein complex // inferred from direct assay /// 0031252 // cell leading edge // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0003779 // actin binding // inferred from electronic annotation /// 0004407 // histone deacetylase activity // inferred from direct assay /// 0004407 // histone deacetylase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from direct assay /// 0008017 // microtubule binding // inferred from sequence or structural similarity /// 0008017 // microtubule binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from sequence or structural similarity /// 0031078 // histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0031593 // polyubiquitin binding // inferred from direct assay /// 0032041 // NAD-dependent histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0032129 // histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0034739 // histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0042903 // tubulin deacetylase activity // inferred from direct assay /// 0042903 // tubulin deacetylase activity // inferred from sequence or structural similarity /// 0042903 // tubulin deacetylase activity // inferred from electronic annotation /// 0043014 // alpha-tubulin binding // inferred from direct assay /// 0043130 // ubiquitin binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046969 // NAD-dependent histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0046970 // NAD-dependent histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation /// 0048156 // tau protein binding // inferred from direct assay /// 0048487 // beta-tubulin binding // inferred from electronic annotation /// 0051879 // Hsp90 protein binding // inferred from direct assay /// 0070840 // dynein complex binding // inferred from direct assay","chrX:48661186-48683132 (+) // 100.0 // p11.23"]
["11743179_a_at",0.2328701,0.17501068,0.23021984,-0.17501068,-0.23356342,-0.29326916,0.0012819535,0.00033180622,1.36287,0.44664794,1.36287,"up","RSF1",51773,"0006334 // nucleosome assembly // inferred from direct assay /// 0006334 // nucleosome assembly // traceable author statement /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006352 // transcription initiation, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016584 // nucleosome positioning // inferred from direct assay /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0043392 // negative regulation of DNA binding // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0050434 // positive regulation of viral transcription // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0031213 // RSF complex // inferred from physical interaction","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0042393 // histone binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:77376777-77532063 (-) // 97.85 // q14.1"]
["11721843_a_at",0.2346716,0.20325756,0.22554111,-0.25049782,-0.20325756,-0.28923702,0.0007223185,6.044771e-5,1.3839779,0.4688209,1.3839779,"up","ATL3",25923,"0006184 // GTP catabolic process // non-traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from mutant phenotype /// 0007029 // endoplasmic reticulum organization // inferred from mutant phenotype /// 0007030 // Golgi organization // inferred from mutant phenotype /// 0051260 // protein homooligomerization // inferred from direct assay","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // non-traceable author statement /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from direct assay","chr11:63391553-63439385 (-) // 84.44 // q12.3"]
["11715572_a_at",0.17116928,0.1518383,0.20815182,-0.16666031,-0.31730556,-0.1518383,0.0033525142,0.002164263,1.3094745,0.38898787,1.3094745,"up","CLSTN1",22883,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr1:9789083-9884584 (-) // 90.47 // p36.22"]
["11745006_a_at",0.5101528,0.46435642,0.36277485,-0.36277485,-0.4171276,-0.44791698,0.0007432542,6.946002e-5,1.808802,0.8550345,1.808802,"up","SDC2",6383,"0001666 // response to hypoxia // inferred from electronic annotation /// 0031000 // response to caffeine // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation /// 0048813 // dendrite morphogenesis // inferred from electronic annotation","0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from physical interaction","chr8:97506161-97622843 (+) // 99.46 // q22.1"]
["11725602_at",0.17750454,0.20340729,0.26062202,-0.19942856,-0.17750454,-0.3368473,0.0022857466,0.0012462339,1.3677186,0.4517714,1.3677186,"up","DENND5B",160518,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:31535160-31743952 (-) // 84.17 // p11.21"]
["11726840_a_at",0.36740923,0.3534341,0.27864695,-0.2813449,-0.27864695,-0.31566048,0.0006217929,3.1442254e-5,1.5422616,0.6250475,1.5422616,"up","AVL9",23080,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr7:32535059-32624403 (+) // 97.35 // p14.3"]
["11721899_x_at",0.19519997,0.29972172,0.282259,-0.20164394,-0.19519997,-0.24678993,0.0010912282,0.00019643988,1.3885747,0.47360486,1.3885747,"up","FAM216A",29902,"","","","chr12:110906231-110928190 (+) // 94.76 // q24.11"]
["11735886_a_at",0.3764453,0.17498922,0.31040096,-0.20152092,-0.21935272,-0.17498922,0.002380946,0.0013189765,1.4004587,0.48589945,1.4004587,"up","NEK11",79858,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0031572 // G2/M transition DNA damage checkpoint // inferred from mutant phenotype /// 0031573 // intra-S DNA damage checkpoint // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:130745693-130893982 (+) // 96.07 // q22.1"]
["11759179_at",0.19359207,0.26038837,0.25292397,-0.19359207,-0.39889336,-0.41470337,0.002631878,0.0015369623,1.4859282,0.5713644,1.4859282,"up","TMEM38B",55151,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0015672 // monovalent inorganic cation transport // inferred from electronic annotation /// 0071805 // potassium ion transmembrane transport // traceable author statement /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // non-traceable author statement /// 0033017 // sarcoplasmic reticulum membrane // non-traceable author statement","0005216 // ion channel activity // inferred from electronic annotation /// 0005261 // cation channel activity // inferred from electronic annotation /// 0005267 // potassium channel activity // traceable author statement /// 0005267 // potassium channel activity // inferred from electronic annotation","chr9:108456821-108538097 (+) // 97.78 // q31.2"]
["11725471_a_at",0.22105598,0.31793213,0.2869196,-0.22105598,-0.28977394,-0.25067902,0.00089303567,0.00010922572,1.4430676,0.52913886,1.4430676,"up","MAN2A1",4124,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006013 // mannose metabolic process // inferred from electronic annotation /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006491 // N-glycan processing // inferred from electronic annotation /// 0007005 // mitochondrion organization // inferred from electronic annotation /// 0007033 // vacuole organization // inferred from electronic annotation /// 0007585 // respiratory gaseous exchange // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0048286 // lung alveolus development // inferred from electronic annotation","0000139 // Golgi membrane // traceable author statement /// 0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds // inferred from electronic annotation /// 0004559 // alpha-mannosidase activity // inferred from electronic annotation /// 0004572 // mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity // inferred from electronic annotation /// 0004572 // mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0015923 // mannosidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0016799 // hydrolase activity, hydrolyzing N-glycosyl compounds // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0043169 // cation binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:109025066-109203429 (+) // 97.72 // q21.3"]
["11716577_s_at",0.30813503,0.19369984,0.1456747,-0.1456747,-0.19693947,-0.1959095,0.0025946551,0.0015000338,1.3152567,0.39534444,1.3152567,"up","SDC1",6382,"0001657 // ureteric bud development // inferred from electronic annotation /// 0006629 // lipid metabolic process // traceable author statement /// 0009636 // response to toxin // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation /// 0042157 // lipoprotein metabolic process // traceable author statement /// 0042476 // odontogenesis // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0048627 // myoblast development // inferred from sequence or structural similarity /// 0048627 // myoblast development // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from electronic annotation /// 0055002 // striated muscle cell development // inferred from expression pattern /// 0060009 // Sertoli cell development // inferred from electronic annotation /// 0060070 // canonical Wnt receptor signaling pathway // inferred from electronic annotation","0001931 // uropod // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0005925 // focal adhesion // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0001948 // glycoprotein binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation","chr2:20400557-20425194 (-) // 97.07 // p24.1"]
["11734268_a_at",0.12110424,0.12583113,0.17494202,-0.46172,-0.25128746,-0.12110424,0.015546219,0.014180401,1.3366883,0.41866302,1.3366883,"up","HOXC11",3227,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007492 // endoderm development // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr12:54366909-54370201 (+) // 95.02 // q13.13"]
["11724851_a_at",0.32880068,0.37647295,0.29150772,-0.29150772,-0.334929,-0.4562106,0.0011409034,0.00022945818,1.6168019,0.6931429,1.6168019,"up","STXBP6",29091,"0016192 // vesicle-mediated transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr14:25278862-25519095 (-) // 95.83 // q12"]
["11730262_a_at",0.336174,0.30998516,0.133214,-0.133214,-0.18934155,-0.18716335,0.004201956,0.0029261685,1.346951,0.42969733,1.346951,"up","TBCD",6904,"0006457 // protein folding // inferred from direct assay /// 0006457 // protein folding // traceable author statement /// 0007023 // post-chaperonin tubulin folding pathway // inferred from direct assay /// 0010812 // negative regulation of cell-substrate adhesion // inferred from sequence or structural similarity /// 0031115 // negative regulation of microtubule polymerization // inferred from direct assay /// 0034333 // adherens junction assembly // inferred from sequence or structural similarity /// 0043547 // positive regulation of GTPase activity // inferred from direct assay /// 0043547 // positive regulation of GTPase activity // inferred from mutant phenotype /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0070830 // tight junction assembly // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0005874 // microtubule // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005912 // adherens junction // inferred from sequence or structural similarity /// 0005912 // adherens junction // inferred from electronic annotation /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016328 // lateral plasma membrane // inferred from sequence or structural similarity /// 0016328 // lateral plasma membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from direct assay /// 0005096 // GTPase activator activity // inferred from mutant phenotype /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0048487 // beta-tubulin binding // inferred from direct assay /// 0051087 // chaperone binding // traceable author statement","chr17:80709662-80901492 (+) // 96.58 // q25.3"]
["11754385_s_at",0.22348022,0.25250626,0.23829365,-0.2681408,-0.2564783,-0.22348022,0.00040977335,6.54692e-6,1.4019742,0.48745984,1.4019742,"up","WASL",8976,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006461 // protein complex assembly // inferred from electronic annotation /// 0006461 // protein complex assembly // traceable author statement /// 0006900 // membrane budding // inferred from sequence or structural similarity /// 0006928 // cellular component movement // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0008154 // actin polymerization or depolymerization // inferred from electronic annotation /// 0008154 // actin polymerization or depolymerization // traceable author statement /// 0009617 // response to bacterium // inferred from electronic annotation /// 0016050 // vesicle organization // inferred from sequence or structural similarity /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030050 // vesicle transport along actin filament // inferred from sequence or structural similarity /// 0034629 // cellular protein complex localization // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046209 // nitric oxide metabolic process // traceable author statement /// 0050999 // regulation of nitric-oxide synthase activity // traceable author statement /// 0051491 // positive regulation of filopodium assembly // inferred from sequence or structural similarity /// 0051653 // spindle localization // inferred from electronic annotation /// 2000370 // positive regulation of clathrin-mediated endocytosis // inferred from sequence or structural similarity","0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0015629 // actin cytoskeleton // traceable author statement /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from sequence or structural similarity /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030478 // actin cap // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement","0003779 // actin binding // inferred from electronic annotation /// 0005083 // small GTPase regulator activity // inferred from electronic annotation /// 0005083 // small GTPase regulator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr7:123321569-123323966 (-) // 47.98 // q31.32"]
["11722316_at",0.15947485,0.2945218,0.22202063,-0.15947485,-0.16510248,-0.20640135,0.0016408183,0.00064728234,1.3216425,0.402332,1.3216425,"up","SNX13",23161,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from mutant phenotype /// 0007154 // cell communication // inferred from electronic annotation /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0038032 // termination of G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from direct assay","0005622 // intracellular // inferred from mutant phenotype /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation","0008289 // lipid binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from direct assay /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr7:17830384-17980141 (-) // 97.53 // p21.1"]
["11729646_at",0.7087083,0.34458494,0.41568565,-0.34814167,-0.34458542,-0.42790747,0.0027945365,0.0016692602,1.8190743,0.8632045,1.8190743,"up","TM4SF4",7104,"0042246 // tissue regeneration // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:149191760-149221070 (+) // 94.69 // q25.1"]
["11739560_at",0.31837845,0.4613161,0.4843006,-0.3719654,-0.31837845,-0.5766363,0.0018693322,0.00086216617,1.7945952,0.84365845,1.7945952,"up","GDAP1",54332,"0000266 // mitochondrial fission // inferred from direct assay /// 0006626 // protein targeting to mitochondrion // inferred from mutant phenotype /// 0032526 // response to retinoic acid // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0031307 // integral to mitochondrial outer membrane // inferred from direct assay","","chr8:75262616-75279357 (+) // 99.21 // q21.11"]
["11725862_a_at",0.22025299,0.20310354,0.19077253,-0.41132116,-0.37982273,-0.19077206,0.0026533955,0.0015563845,1.4459474,0.532015,1.4459474,"up","FAM13B",51306,"0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005096 // GTPase activator activity // inferred from electronic annotation","chr5:137273608-137368802 (-) // 98.28 // q31.2"]
["11730603_a_at",0.5335994,0.33687258,0.3866849,-0.3442483,-0.33687258,-0.43439102,0.0012251986,0.00029231698,1.7301409,0.79088956,1.7301409,"up","FAM13C",220965,"","","","chr10:61005578-61122661 (-) // 96.97 // q21.1"]
["11741231_a_at",0.21676731,0.16061878,0.19482708,-0.16061878,-0.16979408,-0.2979803,0.0020834338,0.0010650456,1.3196927,0.4002021,1.3196927,"up","GGPS1",9453,"0006695 // cholesterol biosynthetic process // traceable author statement /// 0006720 // isoprenoid metabolic process // inferred from direct assay /// 0008299 // isoprenoid biosynthetic process // inferred from electronic annotation /// 0033384 // geranyl diphosphate biosynthetic process // inferred from electronic annotation /// 0033386 // geranylgeranyl diphosphate biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045337 // farnesyl diphosphate biosynthetic process // inferred from electronic annotation","0005625 // soluble fraction // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004161 // dimethylallyltranstransferase activity // inferred from electronic annotation /// 0004311 // farnesyltranstransferase activity // inferred from direct assay /// 0004311 // farnesyltranstransferase activity // inferred from electronic annotation /// 0004337 // geranyltranstransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:235491868-235507842 (+) // 89.13 // q42.3"]
["11751027_a_at",0.30467463,0.2921281,0.18846893,-0.18846893,-0.3277421,-0.2890811,0.0016656929,0.0006701445,1.4441173,0.53018796,1.4441173,"up","TMC7",79905,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr16:18995344-19056575 (+) // 98.67 // p12.3"]
["11720274_x_at",0.3601756,0.23809814,0.18417645,-0.18417645,-0.22373772,-0.19117785,0.0020003177,0.0009989064,1.376032,0.46051407,1.376032,"up","ALKBH6",84964,"0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:36500022-36505145 (-) // 91.69 // q13.12"]
["11722015_at",1.26441,1.1573772,1.1443224,-1.1443224,-1.2183123,-1.2278881,0.00024662862,8.49711e-7,5.2254095,2.385544,5.2254095,"up","OLR1",4973,"0006508 // proteolysis // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007159 // leukocyte cell-cell adhesion // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008015 // blood circulation // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0042157 // lipoprotein metabolic process // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005041 // low-density lipoprotein receptor activity // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr12:10310899-10324802 (-) // 78.55 // p13.2"]
["11753953_x_at",0.19851017,0.14413357,0.26030397,-0.1441338,-0.18957591,-0.23428345,0.0017807008,0.0007783423,1.3106782,0.39031363,1.3106782,"up","GLB1L",79411,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0043169 // cation binding // inferred from electronic annotation","chr2:220101327-220110194 (-) // 87.68 // q35"]
["11752563_a_at",0.29127073,0.35198975,0.43308306,-0.29371977,-0.2912712,-0.29535055,0.00084399927,9.211221e-5,1.5715938,0.65222836,1.5715938,"up","DZIP3",9666,"0000209 // protein polyubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019902 // phosphatase binding // inferred from direct assay /// 0031593 // polyubiquitin binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:108363244-108406940 (+) // 99.84 // q13.13"]
["11754473_a_at",0.78137684,0.58131075,0.6525426,-0.5813103,-0.8700118,-0.94430923,0.0012361597,0.00030116722,2.7707703,1.4702871,2.7707703,"up","CADM1",23705,"0001889 // liver development // inferred from electronic annotation /// 0001913 // T cell mediated cytotoxicity // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from sequence or structural similarity /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007157 // heterophilic cell-cell adhesion // inferred from sequence or structural similarity /// 0007157 // heterophilic cell-cell adhesion // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007416 // synapse assembly // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008037 // cell recognition // inferred from direct assay /// 0008037 // cell recognition // inferred from sequence or structural similarity /// 0008037 // cell recognition // inferred from electronic annotation /// 0009826 // unidimensional cell growth // inferred from electronic annotation /// 0016338 // calcium-independent cell-cell adhesion // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0042271 // susceptibility to natural killer cell mediated cytotoxicity // inferred from direct assay /// 0042271 // susceptibility to natural killer cell mediated cytotoxicity // inferred from sequence or structural similarity /// 0042271 // susceptibility to natural killer cell mediated cytotoxicity // inferred from electronic annotation /// 0045216 // cell-cell junction organization // traceable author statement /// 0045954 // positive regulation of natural killer cell mediated cytotoxicity // inferred from direct assay /// 0045954 // positive regulation of natural killer cell mediated cytotoxicity // inferred from sequence or structural similarity /// 0045954 // positive regulation of natural killer cell mediated cytotoxicity // inferred from electronic annotation /// 0050715 // positive regulation of cytokine secretion // inferred from direct assay /// 0050798 // activated T cell proliferation // inferred from direct assay /// 0051606 // detection of stimulus // inferred from direct assay /// 0051606 // detection of stimulus // inferred from sequence or structural similarity /// 0051606 // detection of stimulus // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from sequence or structural similarity /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from sequence or structural similarity /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005102 // receptor binding // inferred from physical interaction /// 0005102 // receptor binding // inferred from sequence or structural similarity /// 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from sequence or structural similarity /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from sequence or structural similarity /// 0030165 // PDZ domain binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0050839 // cell adhesion molecule binding // inferred from electronic annotation","chr11:115044348-115075482 (-) // 95.37 // q23.3"]
["11751549_a_at",0.21471024,0.22216797,0.22931957,-0.24646568,-0.21471024,-0.38510132,0.0016444417,0.0006565019,1.4182957,0.5041584,1.4182957,"up","CD46",4179,"0006958 // complement activation, classical pathway // inferred from electronic annotation /// 0007338 // single fertilization // inferred from electronic annotation /// 0030449 // regulation of complement activation // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation","0002079 // inner acrosomal membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // non-traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0004872 // receptor activity // traceable author statement","chr1:207925430-207967467 (+) // 100.0 // q32.2"]
["11715639_a_at",0.1812725,0.15034103,0.18615627,-0.15034103,-0.1976347,-0.27766514,0.0016010772,0.0006029755,1.3023678,0.3811369,1.3023678,"up","TTC3P1","286495 /// 7267","0006511 // ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0010771 // negative regulation of cell morphogenesis involved in differentiation // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005773 // vacuole // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr21:38121747-38575408 (+) // 77.26 // q22.13"]
["11720850_a_at",0.33202553,0.1424532,0.24230385,-0.14245272,-0.19950104,-0.21579838,0.003161987,0.0019831702,1.3424282,0.42484492,1.3424282,"up","RAB23",51715,"0006810 // transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0008589 // regulation of smoothened signaling pathway // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0021513 // spinal cord dorsal/ventral patterning // inferred from electronic annotation /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0045861 // negative regulation of proteolysis // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr6:57053284-57087112 (-) // 99.16 // p11.2"]
["11719381_a_at",0.31513596,0.22164059,0.17986012,-0.20346737,-0.2761488,-0.17986012,0.0017462111,0.00074735825,1.374307,0.45870432,1.374307,"up","PSENEN",55851,"0006509 // membrane protein ectodomain proteolysis // inferred from direct assay /// 0006915 // apoptotic process // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007220 // Notch receptor processing // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0016485 // protein processing // inferred from direct assay /// 0031293 // membrane protein intracellular domain proteolysis // traceable author statement /// 0042987 // amyloid precursor protein catabolic process // traceable author statement /// 0043085 // positive regulation of catalytic activity // inferred from direct assay /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr19:36235992-36238417 (+) // 92.5 // q13.12"]
["11734453_at",0.35781956,0.24164581,0.15775585,-0.16729927,-0.23596382,-0.15775585,0.0034112982,0.0022242486,1.3560528,0.43941337,1.3560528,"up","C11orf86",254439,"","","","chr11:66742747-66744475 (+) // 91.01 // q13.2"]
["11719077_a_at",0.43571568,0.46932507,0.48081112,-0.5704975,-0.56649065,-0.43571568,0.0006216412,2.8716377e-5,1.98094,0.9861852,1.98094,"up","RPUSD4",84881,"0001522 // pseudouridine synthesis // inferred from electronic annotation /// 0009451 // RNA modification // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0009982 // pseudouridine synthase activity // inferred from electronic annotation","chr11:126071988-126081587 (-) // 84.78 // q24.2"]
["11717271_a_at",0.5489216,0.31508112,0.32107544,-0.3150816,-0.46008968,-0.39161348,0.0018693322,0.0008632889,1.7218438,0.7839543,1.7218438,"up","PRAME",23532,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0040008 // regulation of growth // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0045596 // negative regulation of cell differentiation // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0048387 // negative regulation of retinoic acid receptor signaling pathway // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0042974 // retinoic acid receptor binding // inferred from direct assay","chr22:22890122-22902176 (-) // 93.34 // q11.22"]
["11723420_s_at",0.6649647,0.61796284,0.5999346,-0.5999341,-0.7223549,-1.0598154,0.0014931919,0.00051316415,2.6789272,1.4216554,2.6789272,"up","BTF3L4",91408,"","","","chr1:52521801-52554585 (+) // 87.15 // p32.3"]
["11725747_a_at",0.14648533,0.13612652,0.17231941,-0.13612652,-0.34864712,-0.24141026,0.0045107757,0.0032051865,1.313763,0.39370507,1.313763,"up","ATP2C1",27032,"0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from direct assay /// 0006816 // calcium ion transport // inferred from mutant phenotype /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006828 // manganese ion transport // inferred from direct assay /// 0006874 // cellular calcium ion homeostasis // inferred from direct assay /// 0006874 // cellular calcium ion homeostasis // inferred from mutant phenotype /// 0007165 // signal transduction // inferred from mutant phenotype /// 0008152 // metabolic process // inferred from electronic annotation /// 0008544 // epidermis development // inferred from mutant phenotype /// 0016339 // calcium-dependent cell-cell adhesion // inferred from mutant phenotype /// 0030026 // cellular manganese ion homeostasis // inferred from direct assay /// 0031532 // actin cytoskeleton reorganization // inferred from mutant phenotype /// 0032468 // Golgi calcium ion homeostasis // inferred from mutant phenotype /// 0032472 // Golgi calcium ion transport // inferred from mutant phenotype /// 0034220 // ion transmembrane transport // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype /// 0055085 // transmembrane transport // traceable author statement","0000139 // Golgi membrane // inferred from direct assay /// 0000139 // Golgi membrane // traceable author statement /// 0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005388 // calcium-transporting ATPase activity // inferred from direct assay /// 0005388 // calcium-transporting ATPase activity // inferred from mutant phenotype /// 0005388 // calcium-transporting ATPase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0015410 // manganese-transporting ATPase activity // inferred from direct assay /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:130613433-130735556 (+) // 99.32 // q22.1"]
["11740311_at",0.49372625,0.34635735,0.414639,-0.38161755,-0.3480692,-0.34635687,0.0007223185,6.09709e-5,1.7134714,0.7769221,1.7134714,"up","HAS2",3037,"0001822 // kidney development // inferred from sequence or structural similarity /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0030213 // hyaluronan biosynthetic process // inferred from direct assay /// 0030213 // hyaluronan biosynthetic process // inferred from electronic annotation /// 0030213 // hyaluronan biosynthetic process // inferred from mutant phenotype /// 0030213 // hyaluronan biosynthetic process // inferred from sequence or structural similarity /// 0035810 // positive regulation of urine volume // inferred from sequence or structural similarity /// 0036120 // cellular response to platelet-derived growth factor stimulus // inferred from direct assay /// 0070295 // renal water absorption // inferred from sequence or structural similarity /// 0071347 // cellular response to interleukin-1 // inferred from expression pattern /// 0071356 // cellular response to tumor necrosis factor // inferred from expression pattern /// 0071498 // cellular response to fluid shear stress // inferred from expression pattern /// 1900625 // positive regulation of monocyte aggregation // inferred from mutant phenotype /// 2000147 // positive regulation of cell motility // inferred from mutant phenotype","0005624 // membrane fraction // inferred from direct assay /// 0005625 // soluble fraction // inferred from direct assay /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016758 // transferase activity, transferring hexosyl groups // inferred from electronic annotation /// 0050501 // hyaluronan synthase activity // inferred from mutant phenotype /// 0050501 // hyaluronan synthase activity // inferred from sequence or structural similarity /// 0050501 // hyaluronan synthase activity // inferred from electronic annotation","chr8:122625149-122653659 (-) // 96.22 // q24.13"]
["11735984_at",0.26811075,0.18669987,0.28059626,-0.27714825,-0.18669987,-0.28473043,0.0012808557,0.00032919497,1.4089904,0.4946618,1.4089904,"up","OR2B6",26212,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr6:27925018-27925960 (+) // 99.16 // p22.1"]
["11758335_s_at",0.20035458,0.17126274,0.16778278,-0.16778278,-0.2961588,-0.19016647,0.0016183598,0.0006264919,1.3175302,0.39783603,1.3175302,"up","FDX1",2230,"0006091 // generation of precursor metabolites and energy // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0030325 // adrenal gland development // inferred from electronic annotation /// 0034698 // response to gonadotropin stimulus // inferred from electronic annotation /// 0044320 // cellular response to leptin stimulus // inferred from electronic annotation /// 0044321 // response to leptin stimulus // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051353 // positive regulation of oxidoreductase activity // inferred from electronic annotation /// 0070995 // NADPH oxidation // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0071872 // cellular response to epinephrine stimulus // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0030061 // mitochondrial crista // inferred from electronic annotation","0005506 // iron ion binding // inferred from electronic annotation /// 0005506 // iron ion binding // traceable author statement /// 0008386 // cholesterol monooxygenase (side-chain-cleaving) activity // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0009055 // electron carrier activity // traceable author statement /// 0015039 // NADPH-adrenodoxin reductase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation","chr11:110306581-110333510 (+) // 90.05 // q22.3"]
["11745234_a_at",0.20260096,0.19575214,0.19381762,-0.19381762,-0.34526825,-0.2707777,0.0014235608,0.00043712382,1.3825625,0.46734476,1.3825625,"up","PTPLAD2",401494,"0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016829 // lyase activity // inferred from electronic annotation","chr9:20995305-21029399 (-) // 74.97 // p21.3"]
["11728858_at",0.44945478,0.39391613,0.21308804,-0.2531371,-0.33647108,-0.21308851,0.0025946551,0.0015016296,1.5365754,0.61971855,1.5365754,"up","CEP19",84984,"","0000922 // spindle pole // inferred from direct assay /// 0000922 // spindle pole // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005814 // centriole // inferred from direct assay /// 0005814 // centriole // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","","chr3:196433148-196439159 (-) // 82.36 // q29"]
["11719522_at",0.3728366,0.13171387,0.25236034,-0.13171387,-0.20670652,-0.20865726,0.0055560446,0.0042113,1.3515949,0.43466282,1.3515949,"up","SEMA5A",9037,"0001569 // patterning of blood vessels // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0008046 // axon guidance receptor activity // inferred from electronic annotation","chr5:9035141-9546233 (-) // 95.93 // p15.31"]
["11716504_x_at",0.6169543,0.31873035,0.33745003,-0.34478664,-0.46713352,-0.31873083,0.0028132095,0.0016852017,1.7426248,0.8012619,1.7426248,"up","CRMP1",1400,"0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0006208 // pyrimidine base catabolic process // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007411 // axon guidance // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0004157 // dihydropyrimidinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016810 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds // inferred from electronic annotation /// 0016812 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides // inferred from electronic annotation","chr4:5822513-5894811 (-) // 95.2 // p16.2"]
["11723806_at",0.1752553,0.27020788,0.19591284,-0.48191833,-0.17525578,-0.2901473,0.006206978,0.004881112,1.4434947,0.5295658,1.4434947,"up","STX17",55014,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005484 // SNAP receptor activity // inferred from electronic annotation","chr9:102668943-102736364 (+) // 72.98 // q31.1"]
["11748141_a_at",0.25384712,0.23481083,0.17854404,-0.29143047,-0.2612524,-0.17854404,0.0012808557,0.0003289946,1.3814113,0.46614295,1.3814113,"up","CRIP2",1397,"0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from electronic annotation","0031012 // extracellular matrix // inferred from direct assay","0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:105939298-105946031 (+) // 99.91 // q32.33"]
["11722235_a_at",0.2946663,0.3756361,0.26677132,-0.26677132,-0.39455223,-0.29889488,0.0011428653,0.00023182151,1.5501746,0.6324307,1.5501746,"up","FBXO2",26232,"0006464 // cellular protein modification process // traceable author statement /// 0006508 // proteolysis // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006516 // glycoprotein catabolic process // inferred from sequence or structural similarity /// 0006516 // glycoprotein catabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from sequence or structural similarity /// 0016567 // protein ubiquitination // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030163 // protein catabolic process // inferred from electronic annotation /// 0030433 // ER-associated protein catabolic process // inferred from electronic annotation /// 0031146 // SCF-dependent proteasomal ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0031146 // SCF-dependent proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0031396 // regulation of protein ubiquitination // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019005 // SCF ubiquitin ligase complex // inferred from sequence or structural similarity /// 0019005 // SCF ubiquitin ligase complex // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation","0001540 // beta-amyloid binding // inferred from electronic annotation /// 0001948 // glycoprotein binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr1:11708417-11714890 (-) // 83.32 // p36.22"]
["11723747_a_at",0.22437954,0.21201515,0.17958641,-0.17958641,-0.22910023,-0.26440716,0.00088391156,0.00010506442,1.3469456,0.4296916,1.3469456,"up","FAM64A",54478,"","0005730 // nucleolus // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr17:6347758-6354780 (+) // 95.58 // p13.2"]
["11736543_at",0.14648819,0.16035652,0.102412224,-0.44977856,-0.102412224,-0.26735306,0.017146295,0.015831893,1.3283178,0.40960026,1.3283178,"up","C9orf41",138199,"","","","chr9:77595713-77643393 (-) // 95.01 // q21.13"]
["11729621_at",0.25217247,0.20200777,0.31594658,-0.26279116,-0.2020073,-0.41680288,0.002664289,0.001565069,1.4646704,0.5505761,1.4646704,"up","CLCN4",1183,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from direct assay /// 0006821 // chloride transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005768 // endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005247 // voltage-gated chloride channel activity // inferred from electronic annotation /// 0005247 // voltage-gated chloride channel activity // traceable author statement /// 0005254 // chloride channel activity // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0015297 // antiporter activity // inferred from electronic annotation","chrX:10124872-10205705 (+) // 94.17 // p22.2"]
["11729229_at",0.44968605,0.24940538,0.27865505,-0.35547972,-0.41549015,-0.2494049,0.0021139982,0.0010897743,1.5867121,0.6660404,1.5867121,"up","KLF3",51274,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:38665803-38703134 (+) // 98.12 // p14"]
["11717903_s_at",0.4481449,0.49370193,0.4868803,-0.4481449,-0.5146074,-0.6554203,0.00083066477,8.514135e-5,2.02179,1.0156332,2.02179,"up","IER3IP1",51124,"0042981 // regulation of apoptotic process // inferred from mutant phenotype","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr18:44681412-44702735 (-) // 93.75 // q21.1"]
["11746863_x_at",0.4979515,0.090081215,0.2574334,-0.14765215,-0.134933,-0.090081215,0.028624086,0.027440662,1.3250476,0.4060442,1.3250476,"up","ARSJ",79642,"0008152 // metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004065 // arylsulfatase activity // traceable author statement /// 0008484 // sulfuric ester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:114821399-114900857 (-) // 93.05 // q26"]
["11727713_at",0.19433784,0.24052525,0.22576714,-0.37357044,-0.19433784,-0.21187973,0.0022579338,0.0012125941,1.3948784,0.4801394,1.3948784,"up","KCNJ12","100653095 /// 3768","0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // traceable author statement /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0008015 // blood circulation // non-traceable author statement /// 0008016 // regulation of heart contraction // traceable author statement /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030315 // T-tubule // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005242 // inward rectifier potassium channel activity // inferred from electronic annotation /// 0005242 // inward rectifier potassium channel activity // inferred from direct assay /// 0005242 // inward rectifier potassium channel activity // traceable author statement /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0008200 // ion channel inhibitor activity // traceable author statement /// 0015459 // potassium channel regulator activity // traceable author statement /// 0030165 // PDZ domain binding // inferred from electronic annotation","chr17:21279508-21323181 (+) // 97.8 // p11.2"]
["11716707_a_at",0.58847237,0.6795702,0.5777044,-0.70649195,-0.5777044,-0.6483693,0.0005467525,1.3945054e-5,2.394024,1.2594376,2.394024,"up","ARL2BP",23568,"0007165 // signal transduction // traceable author statement /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from mutant phenotype /// 0051457 // maintenance of protein location in nucleus // inferred from mutant phenotype","0005634 // nucleus // inferred from mutant phenotype /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from direct assay /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay","0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0005083 // small GTPase regulator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr16:57279009-57287547 (+) // 95.14 // q13"]
["11748456_a_at",0.13460398,0.16226912,0.20314312,-0.13460398,-0.3554926,-0.21416664,0.005381051,0.004029995,1.3208132,0.40142646,1.3208132,"up","MCF2L",23263,"0006915 // apoptotic process // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0005545 // 1-phosphatidylinositol binding // inferred from electronic annotation","chr13:113656027-113751224 (+) // 99.86 // q34"]
["11758563_at",0.4498062,0.4444208,0.3062234,-0.30622292,-0.416533,-0.4025979,0.0010771177,0.00018612259,1.711508,0.7752681,1.711508,"up","LOC100506290","100506290 /// 100653153 /// 151194","0032259 // methylation // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr2:208477464-208477880 (-) // 98.81 // q33.3"]
["11722833_a_at",0.5262699,0.2893648,0.12721348,-0.12721395,-0.2027545,-0.17945194,0.016152874,0.014824191,1.3987029,0.48408955,1.3987029,"up","CCNY",219771,"0000079 // regulation of cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0000086 // G2/M transition of mitotic cell cycle // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0045737 // positive regulation of cyclin-dependent protein kinase activity // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation /// 0060828 // regulation of canonical Wnt receptor signaling pathway // inferred from direct assay","0000308 // cytoplasmic cyclin-dependent protein kinase holoenzyme complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0016538 // cyclin-dependent protein kinase regulator activity // inferred from direct assay /// 0019901 // protein kinase binding // inferred from electronic annotation","chr10:35625801-35860854 (+) // 97.78 // p11.21"]
["11754593_x_at",0.2062521,0.28200817,0.34986115,-0.29603004,-0.22319603,-0.2062521,0.001459056,0.00047059942,1.4351482,0.5211998,1.4351482,"up","TUBB3",10381,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0007017 // microtubule-based process // inferred from electronic annotation /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007411 // axon guidance // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0051258 // protein polymerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004977 // melanocortin receptor activity // inferred from electronic annotation /// 0004980 // melanocyte-stimulating hormone receptor activity // inferred from electronic annotation /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr16:89989752-90002482 (+) // 93.83 // q24.3"]
["11720486_a_at",0.22411442,0.1608901,0.22718811,-0.22520447,-0.1608901,-0.1863308,0.0010019254,0.00015893491,1.3148267,0.39487267,1.3148267,"up","SENP2",59343,"0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0009950 // dorsal/ventral axis specification // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016926 // protein desumoylation // inferred from sequence or structural similarity /// 0016926 // protein desumoylation // inferred from electronic annotation /// 0030111 // regulation of Wnt receptor signaling pathway // non-traceable author statement /// 0032091 // negative regulation of protein binding // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation /// 0051246 // regulation of protein metabolic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from direct assay /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016605 // PML body // inferred from sequence or structural similarity /// 0016605 // PML body // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016929 // SUMO-specific protease activity // inferred from direct assay /// 0016929 // SUMO-specific protease activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation","chr3:185303961-185348889 (+) // 97.37 // q27.2"]
["11748167_a_at",0.46921825,0.36463547,0.32526684,-0.32526684,-0.5752864,-0.64835453,0.0020938502,0.0010748792,1.8695307,0.9026761,1.8695307,"up","FAM227A",646851,"","","","chr22:38981999-39052308 (-) // 96.35 // q13.1"]
["11748693_a_at",0.38355732,0.30568886,0.23315334,-0.24377918,-0.23315334,-0.33435345,0.001415604,0.00043224083,1.4926699,0.57789516,1.4926699,"up","RAB5A",5868,"0006184 // GTP catabolic process // inferred from direct assay /// 0006184 // GTP catabolic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from direct assay /// 0006897 // endocytosis // inferred from electronic annotation /// 0006897 // endocytosis // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045921 // positive regulation of exocytosis // inferred from mutant phenotype /// 0051489 // regulation of filopodium assembly // inferred from direct assay /// 2000286 // receptor internalization involved in canonical Wnt receptor signaling pathway // inferred from mutant phenotype","0001726 // ruffle // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005769 // early endosome // inferred from electronic annotation /// 0005769 // early endosome // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0003924 // GTPase activity // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from electronic annotation /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0019003 // GDP binding // inferred from direct assay","chr3:19988896-20025942 (+) // 99.17 // p24.3"]
["11720306_at",0.4524231,0.38371754,0.4563427,-0.41269302,-0.38371754,-0.50732327,0.0006672249,3.994154e-5,1.8218518,0.8654057,1.8218518,"up","SERP1",27230,"0001501 // skeletal system development // inferred from electronic annotation /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006464 // cellular protein modification process // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006486 // protein glycosylation // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006950 // response to stress // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007009 // plasma membrane organization // traceable author statement /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0010259 // multicellular organismal aging // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from electronic annotation /// 0046622 // positive regulation of organ growth // inferred from electronic annotation /// 0048644 // muscle organ morphogenesis // inferred from electronic annotation /// 0060124 // positive regulation of growth hormone secretion // inferred from electronic annotation","0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005840 // ribosome // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:150259779-150264712 (-) // 98.88 // q25.1"]
["11724357_a_at",0.26237774,0.18462849,0.23694229,-0.18462849,-0.29557276,-0.21667767,0.0012808557,0.00032983793,1.3758048,0.4602758,1.3758048,"up","MYO5A",4644,"0006582 // melanin metabolic process // inferred from electronic annotation /// 0006810 // transport // non-traceable author statement /// 0006887 // exocytosis // inferred from electronic annotation /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0030048 // actin filament-based movement // non-traceable author statement /// 0030048 // actin filament-based movement // inferred from electronic annotation /// 0030073 // insulin secretion // inferred from electronic annotation /// 0030318 // melanocyte differentiation // inferred from electronic annotation /// 0031585 // regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity // inferred from electronic annotation /// 0031987 // locomotion involved in locomotory behavior // inferred from electronic annotation /// 0032252 // secretory granule localization // inferred from electronic annotation /// 0032400 // melanosome localization // inferred from electronic annotation /// 0032402 // melanosome transport // inferred from electronic annotation /// 0042438 // melanin biosynthetic process // inferred from electronic annotation /// 0042476 // odontogenesis // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation /// 0042640 // anagen // inferred from electronic annotation /// 0042759 // long-chain fatty acid biosynthetic process // inferred from electronic annotation /// 0043473 // pigmentation // inferred from electronic annotation /// 0048066 // developmental pigmentation // inferred from electronic annotation /// 0050808 // synapse organization // inferred from electronic annotation /// 0051643 // endoplasmic reticulum localization // inferred from electronic annotation","0001726 // ruffle // inferred from direct assay /// 0001750 // photoreceptor outer segment // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005882 // intermediate filament // inferred from electronic annotation /// 0016459 // myosin complex // inferred from electronic annotation /// 0016459 // myosin complex // non-traceable author statement /// 0030141 // secretory granule // inferred from electronic annotation /// 0030426 // growth cone // non-traceable author statement /// 0042470 // melanosome // inferred from electronic annotation /// 0042641 // actomyosin // inferred from electronic annotation /// 0043005 // neuron projection // non-traceable author statement /// 0043025 // neuronal cell body // inferred from electronic annotation","0000146 // microfilament motor activity // non-traceable author statement /// 0000146 // microfilament motor activity // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0051010 // microtubule plus-end binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from electronic annotation","chr15:52599477-52821247 (-) // 94.6 // q21.2"]
["11755792_s_at",0.22241783,0.33896494,0.1762352,-0.1762352,-0.25747204,-0.29496288,0.0022608375,0.0012176248,1.4032409,0.4887627,1.4032409,"up","PPFIA3",8541,"0007269 // neurotransmitter secretion // inferred from electronic annotation /// 0048172 // regulation of short-term neuronal synaptic plasticity // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr19:49632213-49654278 (+) // 99.18 // q13.33"]
["11739977_at",0.41791534,0.19282532,0.23132324,-0.2106123,-0.19282532,-0.28214645,0.0036415255,0.002417816,1.4232765,0.50921595,1.4232765,"up","GPR180",160897,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr13:95253856-95282698 (+) // 94.94 // q32.1"]
["11720511_a_at",0.24907589,0.23360062,0.1667633,-0.30061436,-0.19501972,-0.1667633,0.0017967653,0.0008006654,1.3540481,0.43727908,1.3540481,"up","CARHSP1",23589,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0035556 // intracellular signal transduction // traceable author statement /// 0043488 // regulation of mRNA stability // inferred from sequence or structural similarity /// 0043488 // regulation of mRNA stability // inferred from electronic annotation","0000177 // cytoplasmic exosome (RNase complex) // inferred from sequence or structural similarity /// 0000177 // cytoplasmic exosome (RNase complex) // inferred from electronic annotation /// 0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005622 // intracellular // traceable author statement /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation /// 0043186 // P granule // inferred from sequence or structural similarity /// 0043186 // P granule // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0019902 // phosphatase binding // non-traceable author statement","chr16:8946801-8962248 (-) // 81.56 // p13.2"]
["11720141_a_at",0.21565437,0.23006916,0.31446838,-0.3227148,-0.21565437,-0.29894447,0.0012233602,0.00028587523,1.4464353,0.5325019,1.4464353,"up","HMMR",3161,"","0005737 // cytoplasm // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005540 // hyaluronic acid binding // inferred from electronic annotation","chr5:162887516-162918947 (+) // 94.72 // q34"]
["11726889_at",0.20471764,0.15528011,0.21152782,-0.15528011,-0.28192425,-0.31198597,0.0020028213,0.00100398,1.3568288,0.44023865,1.3568288,"up","ZFP36L1",677,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006402 // mRNA catabolic process // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0043488 // regulation of mRNA stability // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003729 // mRNA binding // inferred from direct assay /// 0003729 // mRNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0017091 // AU-rich element binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:69261455-69263190 (-) // 96.85 // q24.1"]
["11728155_s_at",0.17287302,0.24011755,0.24666405,-0.17287302,-0.28037405,-0.20173693,0.0013662435,0.0003886124,1.3549249,0.43821287,1.3549249,"up","FUT4",2526,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006486 // protein glycosylation // traceable author statement /// 0036065 // fucosylation // traceable author statement /// 0036065 // fucosylation // inferred from electronic annotation /// 0042355 // L-fucose catabolic process // non-traceable author statement","0005624 // membrane fraction // traceable author statement /// 0005794 // Golgi apparatus // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0071944 // cell periphery // inferred from electronic annotation","0008417 // fucosyltransferase activity // traceable author statement /// 0008417 // fucosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0046920 // alpha-(1->3)-fucosyltransferase activity // traceable author statement /// 0046920 // alpha-(1->3)-fucosyltransferase activity // inferred from electronic annotation","chr11:94277016-94283052 (+) // 78.51 // q21"]
["11729365_at",0.16420078,0.23441982,0.18724728,-0.16420126,-0.28611088,-0.2519951,0.0014867174,0.0005054725,1.3466656,0.4293917,1.3466656,"up","PRKAA2",5563,"0006112 // energy reserve metabolic process // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // inferred from electronic annotation /// 0006853 // carnitine shuttle // traceable author statement /// 0006914 // autophagy // inferred from electronic annotation /// 0006950 // response to stress // inferred from sequence or structural similarity /// 0006950 // response to stress // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008610 // lipid biosynthetic process // inferred from sequence or structural similarity /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0010508 // positive regulation of autophagy // inferred from sequence or structural similarity /// 0010508 // positive regulation of autophagy // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0019216 // regulation of lipid metabolic process // inferred from electronic annotation /// 0031000 // response to caffeine // inferred from electronic annotation /// 0031669 // cellular response to nutrient levels // inferred from sequence or structural similarity /// 0031669 // cellular response to nutrient levels // inferred from electronic annotation /// 0032007 // negative regulation of TOR signaling cascade // inferred from sequence or structural similarity /// 0032007 // negative regulation of TOR signaling cascade // inferred from electronic annotation /// 0035404 // histone-serine phosphorylation // inferred from sequence or structural similarity /// 0035404 // histone-serine phosphorylation // inferred from electronic annotation /// 0042149 // cellular response to glucose starvation // inferred from sequence or structural similarity /// 0042149 // cellular response to glucose starvation // inferred from electronic annotation /// 0042304 // regulation of fatty acid biosynthetic process // traceable author statement /// 0042593 // glucose homeostasis // inferred from sequence or structural similarity /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0042752 // regulation of circadian rhythm // inferred from sequence or structural similarity /// 0042752 // regulation of circadian rhythm // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from sequence or structural similarity /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045821 // positive regulation of glycolysis // inferred from sequence or structural similarity /// 0046320 // regulation of fatty acid oxidation // traceable author statement /// 0048511 // rhythmic process // inferred from electronic annotation /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0055089 // fatty acid homeostasis // inferred from sequence or structural similarity /// 0071417 // cellular response to organic nitrogen // inferred from electronic annotation /// 2000505 // regulation of energy homeostasis // inferred from sequence or structural similarity","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0031588 // AMP-activated protein kinase complex // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from sequence or structural similarity /// 0003682 // chromatin binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from sequence or structural similarity /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004679 // AMP-activated protein kinase activity // inferred from direct assay /// 0004679 // AMP-activated protein kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0030674 // protein binding, bridging // inferred from electronic annotation /// 0035174 // histone serine kinase activity // inferred from sequence or structural similarity /// 0035174 // histone serine kinase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:57110845-57181008 (+) // 89.25 // p32.2"]
["11733383_a_at",0.19678354,0.19668579,0.19228983,-0.36019325,-0.19228935,-0.43304634,0.002973073,0.0018285307,1.4377,0.5237627,1.4377,"up","AFAP1",60312,"0009966 // regulation of signal transduction // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005884 // actin filament // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay","0003779 // actin binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0042169 // SH2 domain binding // inferred from electronic annotation","chr4:7760439-7941653 (-) // 98.02 // p16.1"]
["11743634_s_at",0.30669117,0.40073156,0.3982277,-0.48787642,-0.30669117,-0.50577354,0.0013056329,0.00034460775,1.7435131,0.8019972,1.7435131,"up","MLLT4",4301,"0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005911 // cell-cell junction // traceable author statement /// 0005912 // adherens junction // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation","0008022 // protein C-terminus binding // traceable author statement","chr6:168227601-168372703 (+) // 95.49 // q27"]
["11739602_a_at",0.2569008,0.320817,0.32210636,-0.3326311,-0.34746552,-0.2569008,0.00073524297,6.5228276e-5,1.5286667,0.6122739,1.5286667,"up","BIRC5",332,"0000086 // G2/M transition of mitotic cell cycle // inferred from direct assay /// 0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0000910 // cytokinesis // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitosis // traceable author statement /// 0007067 // mitosis // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // non-traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0031503 // protein complex localization // inferred from mutant phenotype /// 0031536 // positive regulation of exit from mitosis // inferred from mutant phenotype /// 0031577 // spindle checkpoint // inferred from mutant phenotype /// 0042981 // regulation of apoptotic process // inferred from mutant phenotype /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045931 // positive regulation of mitotic cell cycle // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation /// 0051301 // cell division // inferred from mutant phenotype /// 0051303 // establishment of chromosome localization // inferred from mutant phenotype","0000228 // nuclear chromosome // inferred from direct assay /// 0000775 // chromosome, centromeric region // inferred from direct assay /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from direct assay /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005814 // centriole // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005876 // spindle microtubule // inferred from direct assay /// 0005881 // cytoplasmic microtubule // inferred from direct assay /// 0016021 // integral to membrane // non-traceable author statement /// 0030496 // midbody // inferred from direct assay /// 0030496 // midbody // inferred from electronic annotation /// 0031021 // interphase microtubule organizing center // inferred from direct assay /// 0032133 // chromosome passenger complex // inferred from physical interaction","0004869 // cysteine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from direct assay /// 0008017 // microtubule binding // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // non-traceable author statement /// 0008536 // Ran GTPase binding // inferred from physical interaction /// 0015631 // tubulin binding // inferred from direct assay /// 0019899 // enzyme binding // inferred from physical interaction /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0043027 // cysteine-type endopeptidase inhibitor activity involved in apoptotic process // inferred from mutant phenotype /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0048037 // cofactor binding // inferred from direct assay /// 0050897 // cobalt ion binding // non-traceable author statement /// 0051087 // chaperone binding // inferred from physical interaction","chr17:76210266-76221716 (+) // 93.43 // q25.3"]
["11715479_a_at",0.30915546,0.34272385,0.25712395,-0.25712395,-0.282794,-0.28529072,0.00061091204,2.6046639e-5,1.4928515,0.57807064,1.4928515,"up","GABARAP",11337,"0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0006605 // protein targeting // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0000421 // autophagic vacuole membrane // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005776 // autophagic vacuole // inferred from direct assay /// 0005776 // autophagic vacuole // inferred from electronic annotation /// 0005790 // smooth endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005875 // microtubule associated complex // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0012505 // endomembrane system // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from electronic annotation /// 0048487 // beta-tubulin binding // inferred from direct assay /// 0050811 // GABA receptor binding // inferred from physical interaction /// 0050811 // GABA receptor binding // inferred from electronic annotation","chr17:7143388-7146437 (-) // 97.64 // p13.1"]
["11720221_at",0.25596237,0.21755219,0.17949486,-0.17949486,-0.19918442,-0.19583702,0.0007085977,5.762598e-5,1.3279264,0.40917522,1.3279264,"up","GFPT1",2673,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006002 // fructose 6-phosphate metabolic process // traceable author statement /// 0006048 // UDP-N-acetylglucosamine biosynthetic process // inferred from electronic annotation /// 0006048 // UDP-N-acetylglucosamine biosynthetic process // traceable author statement /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0006541 // glutamine metabolic process // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016051 // carbohydrate biosynthetic process // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004360 // glutamine-fructose-6-phosphate transaminase (isomerizing) activity // inferred from electronic annotation /// 0004360 // glutamine-fructose-6-phosphate transaminase (isomerizing) activity // traceable author statement /// 0008483 // transaminase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr2:69546911-69614382 (-) // 88.36 // p13.3"]
["11741135_s_at",0.2585845,0.27587986,0.19338655,-0.4055195,-0.19338655,-0.30337667,0.0022428269,0.0012006175,1.4573808,0.5433779,1.4573808,"up","CHN1",1123,"0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from sequence or structural similarity /// 0008045 // motor axon guidance // inferred from electronic annotation /// 0032314 // regulation of Rac GTPase activity // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0048013 // ephrin receptor signaling pathway // inferred from sequence or structural similarity /// 0048013 // ephrin receptor signaling pathway // inferred from electronic annotation /// 0050770 // regulation of axonogenesis // inferred from sequence or structural similarity /// 0050770 // regulation of axonogenesis // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046875 // ephrin receptor binding // inferred from electronic annotation","chr2:175664041-175870170 (-) // 98.05 // q31.1"]
["11730900_s_at",0.3164873,0.27672577,0.24476719,-0.24476719,-0.32274485,-0.44318533,0.001550606,0.00055170426,1.5328599,0.6162259,1.5328599,"up","MBOAT2",129642,"0006644 // phospholipid metabolic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003841 // 1-acylglycerol-3-phosphate O-acyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation","chr2:8995031-9143942 (-) // 89.12 // p25.1"]
["11754121_a_at",0.29816008,0.32848024,0.25118017,-0.41305447,-0.25118017,-0.4476037,0.0014867174,0.00050706835,1.5836127,0.6632196,1.5836127,"up","BIK",638,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0032464 // positive regulation of protein homooligomerization // inferred from direct assay /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from direct assay","0005740 // mitochondrial envelope // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0051400 // BH domain binding // inferred from electronic annotation","chr22:43520028-43525309 (+) // 67.86 // q13.2"]
["11724916_at",0.6199541,0.5316572,0.5185709,-0.5727329,-0.5185709,-0.5404515,0.00040977335,6.457724e-6,2.1445067,1.1006458,2.1445067,"up","TMTC3",160418,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:88536072-88593664 (+) // 91.71 // q21.32"]
["11743875_at",0.18762875,0.19516087,0.18947983,-0.18762875,-0.1914835,-0.21046734,0.00024662862,8.0365726e-7,1.307928,0.38728303,1.307928,"up","CEP72",55722,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007051 // spindle organization // inferred from mutant phenotype /// 0033566 // gamma-tubulin complex localization // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from electronic annotation","chr5:612386-653673 (+) // 96.71 // p15.33"]
["11749787_a_at",0.614028,0.38038063,0.3982296,-0.38038063,-0.57147884,-0.519907,0.0015251196,0.0005359594,1.938313,0.95480156,1.938313,"up","SEPT2",4735,"0002036 // regulation of L-glutamate transport // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007224 // smoothened signaling pathway // inferred from sequence or structural similarity /// 0007224 // smoothened signaling pathway // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0032880 // regulation of protein localization // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from sequence or structural similarity /// 0042384 // cilium assembly // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0000145 // exocyst // inferred from electronic annotation /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005938 // cell cortex // inferred from sequence or structural similarity /// 0005938 // cell cortex // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030496 // midbody // inferred from electronic annotation /// 0031105 // septin complex // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0060170 // cilium membrane // inferred from sequence or structural similarity /// 0060170 // cilium membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0030234 // enzyme regulator activity // inferred from electronic annotation /// 0032947 // protein complex scaffold // inferred from electronic annotation","chr2:242255367-242291809 (+) // 99.37 // q37.3"]
["11748846_a_at",0.3771696,0.3057127,0.2099514,-0.2099514,-0.23127556,-0.284513,0.0015246323,0.0005351315,1.4534935,0.53952456,1.4534935,"up","NIT1",4817,"0006807 // nitrogen compound metabolic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","0000257 // nitrilase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016810 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds // inferred from electronic annotation","chr1:161087906-161090600 (+) // 99.78 // q23.3"]
["11722666_a_at",0.5714364,0.7514086,0.66525364,-0.5714364,-0.94446445,-0.874825,0.0012591777,0.00031486017,2.7503364,1.4596081,2.7503364,"up","GABRB3",2562,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0034220 // ion transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0034707 // chloride channel complex // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004890 // GABA-A receptor activity // inferred from electronic annotation /// 0004890 // GABA-A receptor activity // traceable author statement /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from electronic annotation","chr15:26788698-27018251 (-) // 96.39 // q12"]
["11758907_at",0.30891848,0.22309923,0.39581585,-0.2559409,-0.3235793,-0.22309923,0.0015673926,0.00057309057,1.4915556,0.5768177,1.4915556,"up","ZNF827",152485,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:146678779-146860112 (-) // 96.32 // q31.21"]
["11728847_a_at",0.4379444,0.4676261,0.32762814,-0.5749626,-0.3276286,-0.4571848,0.00147073,0.00048390945,1.8204875,0.86432487,1.8204875,"up","FAM179A",165186,"","","","chr2:29204163-29275096 (+) // 98.77 // p23.2"]
["11727731_at",0.3112793,0.22529125,0.1834507,-0.20401525,-0.1834507,-0.23576641,0.0013628498,0.00038385176,1.3639126,0.44775122,1.3639126,"up","RASGEF1A",221002,"0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0016477 // cell migration // inferred from direct assay /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005088 // Ras guanyl-nucleotide exchange factor activity // inferred from direct assay","chr10:43689983-43701575 (-) // 96.38 // q11.21"]
["11749777_s_at",0.30136108,0.18401432,0.1418848,-0.1418848,-0.20270061,-0.1758194,0.002796706,0.0016717606,1.3036486,0.382555,1.3036486,"up","TRIM16L","10626 /// 147166","0032526 // response to retinoic acid // inferred from expression pattern /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0043967 // histone H4 acetylation // inferred from direct assay /// 0045618 // positive regulation of keratinocyte differentiation // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0046683 // response to organophosphorus // inferred from expression pattern /// 0048386 // positive regulation of retinoic acid receptor signaling pathway // inferred from direct assay /// 0050718 // positive regulation of interleukin-1 beta secretion // inferred from mutant phenotype /// 0060416 // response to growth hormone stimulus // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016605 // PML body // inferred from direct assay","0003677 // DNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019966 // interleukin-1 binding // inferred from physical interaction /// 0032089 // NACHT domain binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:18601310-18638980 (+) // 98.56 // p11.2 /// chr17:15531721-15587619 (-) // 96.24 // p12"]
["11719010_at",0.23475838,0.35776997,0.37070942,-0.23475838,-0.2975731,-0.32109165,0.0012176305,0.0002752192,1.5215626,0.6055536,1.5215626,"up","TMEM99",147184,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr17:38975373-38992526 (+) // 75.39 // q21.2"]
["11760849_a_at",0.15133142,0.13690138,0.13548326,-0.13548374,-0.28592348,-0.47314167,0.012302879,0.010879122,1.3560606,0.43942165,1.3560606,"up","INADL",10207,"0034329 // cell junction assembly // traceable author statement /// 0035556 // intracellular signal transduction // non-traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement /// 0070830 // tight junction assembly // traceable author statement","0005622 // intracellular // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from direct assay /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:62417983-62583067 (+) // 93.4 // p31.3"]
["11720023_a_at",0.25045395,0.2154913,0.3232026,-0.27569294,-0.21549177,-0.2705307,0.000995791,0.00015409978,1.4309313,0.5169544,1.4309313,"up","FAM118A",55007,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr22:45704862-45737836 (+) // 81.84 // q13.31"]
["11757815_s_at",0.17629051,0.16549778,0.12247658,-0.39254522,-0.12247658,-0.36155462,0.008210878,0.0067752115,1.3631526,0.4469471,1.3631526,"up","METTL7A",25840,"0008152 // metabolic process // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005811 // lipid particle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr12:51325836-51326287 (+) // 98.04 // q13.12"]
["11736582_a_at",0.17938519,0.23400545,0.28612375,-0.4882946,-0.17938471,-0.49755287,0.0060143746,0.0046731024,1.5385616,0.62158215,1.5385616,"up","TRIM36",55521,"0007340 // acrosome reaction // inferred from electronic annotation","0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:114460477-114516243 (-) // 98.99 // q22.3"]
["11749728_a_at",0.19317627,0.15552616,0.14577293,-0.14577293,-0.1673441,-0.35395145,0.005961585,0.004613681,1.3078357,0.38718128,1.3078357,"up","KIAA1715",80856,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007596 // blood coagulation // inferred from electronic annotation /// 0035115 // embryonic forelimb morphogenesis // inferred from electronic annotation /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0060173 // limb development // non-traceable author statement","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:176793902-176867002 (-) // 96.48 // q31.1"]
["11744594_a_at",0.37153244,0.3626938,0.2602992,-0.27423286,-0.26484108,-0.2602992,0.00077926775,7.637247e-5,1.5135813,0.5979662,1.5135813,"up","SEPT6",23157,"0000910 // cytokinesis // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0030496 // midbody // inferred from electronic annotation /// 0031105 // septin complex // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0043679 // axon terminus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation","chrX:118749686-118827333 (-) // 98.72 // q24"]
["11717512_a_at",0.32762337,0.22387123,0.21019316,-0.27135706,-0.21019316,-0.23883295,0.0012172924,0.0002738324,1.4083673,0.49402362,1.4083673,"up","SEPT8",23176,"0007049 // cell cycle // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0031105 // septin complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation","chr5:132091556-132113084 (-) // 89.78 // q31.1"]
["11749934_s_at",0.27587032,0.22942066,0.26719666,-0.22942162,-0.38309193,-0.25196362,0.0013760548,0.00039994688,1.4596828,0.5456549,1.4596828,"up","HSP90AA4P",3323,"0006457 // protein folding // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr4:190394300-190396344 (+) // 95.31 // q35.2"]
["11740409_a_at",0.41416073,0.31732368,0.46120167,-0.45469904,-0.31732368,-0.38462353,0.0010386986,0.00017440978,1.7208374,0.78311074,1.7208374,"up","FGFR2",2263,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0001525 // angiogenesis // inferred from sequence or structural similarity /// 0001657 // ureteric bud development // inferred from sequence or structural similarity /// 0001701 // in utero embryonic development // inferred from sequence or structural similarity /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from sequence or structural similarity /// 0003148 // outflow tract septum morphogenesis // inferred from sequence or structural similarity /// 0003149 // membranous septum morphogenesis // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007267 // cell-cell signaling // inferred from sequence or structural similarity /// 0007409 // axonogenesis // inferred from sequence or structural similarity /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from genetic interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from physical interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // non-traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0008589 // regulation of smoothened signaling pathway // inferred from sequence or structural similarity /// 0009791 // post-embryonic development // inferred from sequence or structural similarity /// 0009880 // embryonic pattern specification // inferred from sequence or structural similarity /// 0009887 // organ morphogenesis // inferred from sequence or structural similarity /// 0010453 // regulation of cell fate commitment // inferred from sequence or structural similarity /// 0010518 // positive regulation of phospholipase activity // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016331 // morphogenesis of embryonic epithelium // inferred from sequence or structural similarity /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0021769 // orbitofrontal cortex development // inferred from sequence or structural similarity /// 0021847 // ventricular zone neuroblast division // inferred from sequence or structural similarity /// 0021860 // pyramidal neuron development // inferred from sequence or structural similarity /// 0022612 // gland morphogenesis // inferred from sequence or structural similarity /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from sequence or structural similarity /// 0030282 // bone mineralization // inferred from sequence or structural similarity /// 0030324 // lung development // inferred from sequence or structural similarity /// 0030855 // epithelial cell differentiation // inferred from sequence or structural similarity /// 0030901 // midbrain development // inferred from sequence or structural similarity /// 0030916 // otic vesicle formation // inferred from sequence or structural similarity /// 0031069 // hair follicle morphogenesis // inferred from sequence or structural similarity /// 0032808 // lacrimal gland development // inferred from sequence or structural similarity /// 0033688 // regulation of osteoblast proliferation // traceable author statement /// 0035264 // multicellular organism growth // inferred from sequence or structural similarity /// 0035265 // organ growth // inferred from sequence or structural similarity /// 0035602 // fibroblast growth factor receptor signaling pathway involved in negative regulation of apoptotic process in bone marrow // inferred from sequence or structural similarity /// 0035603 // fibroblast growth factor receptor signaling pathway involved in hemopoiesis // inferred from sequence or structural similarity /// 0035604 // fibroblast growth factor receptor signaling pathway involved in positive regulation of cell proliferation in bone marrow // inferred from sequence or structural similarity /// 0035607 // fibroblast growth factor receptor signaling pathway involved in orbitofrontal cortex development // inferred from sequence or structural similarity /// 0040014 // regulation of multicellular organism growth // inferred from sequence or structural similarity /// 0040036 // regulation of fibroblast growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0042472 // inner ear morphogenesis // inferred from sequence or structural similarity /// 0042476 // odontogenesis // inferred from sequence or structural similarity /// 0043410 // positive regulation of MAPK cascade // inferred from mutant phenotype /// 0045165 // cell fate commitment // inferred from sequence or structural similarity /// 0045667 // regulation of osteoblast differentiation // traceable author statement /// 0045787 // positive regulation of cell cycle // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048286 // lung alveolus development // inferred from sequence or structural similarity /// 0048557 // embryonic digestive tract morphogenesis // inferred from sequence or structural similarity /// 0048562 // embryonic organ morphogenesis // inferred from sequence or structural similarity /// 0048565 // digestive tract development // inferred from sequence or structural similarity /// 0048568 // embryonic organ development // inferred from sequence or structural similarity /// 0048608 // reproductive structure development // inferred from sequence or structural similarity /// 0048705 // skeletal system morphogenesis // traceable author statement /// 0048730 // epidermis morphogenesis // inferred from sequence or structural similarity /// 0048755 // branching morphogenesis of a nerve // inferred from sequence or structural similarity /// 0048762 // mesenchymal cell differentiation // inferred from sequence or structural similarity /// 0050679 // positive regulation of epithelial cell proliferation // inferred from sequence or structural similarity /// 0051150 // regulation of smooth muscle cell differentiation // inferred from sequence or structural similarity /// 0051781 // positive regulation of cell division // inferred from sequence or structural similarity /// 0055010 // ventricular cardiac muscle tissue morphogenesis // inferred from sequence or structural similarity /// 0060045 // positive regulation of cardiac muscle cell proliferation // inferred from sequence or structural similarity /// 0060174 // limb bud formation // inferred from sequence or structural similarity /// 0060348 // bone development // inferred from sequence or structural similarity /// 0060349 // bone morphogenesis // inferred from sequence or structural similarity /// 0060442 // branching involved in prostate gland morphogenesis // inferred from sequence or structural similarity /// 0060445 // branching involved in salivary gland morphogenesis // inferred from sequence or structural similarity /// 0060449 // bud elongation involved in lung branching // inferred from sequence or structural similarity /// 0060463 // lung lobe morphogenesis // inferred from sequence or structural similarity /// 0060484 // lung-associated mesenchyme development // inferred from sequence or structural similarity /// 0060501 // positive regulation of epithelial cell proliferation involved in lung morphogenesis // inferred from sequence or structural similarity /// 0060512 // prostate gland morphogenesis // inferred from sequence or structural similarity /// 0060523 // prostate epithelial cord elongation // inferred from sequence or structural similarity /// 0060527 // prostate epithelial cord arborization involved in prostate glandular acinus morphogenesis // inferred from sequence or structural similarity /// 0060529 // squamous basal epithelial stem cell differentiation involved in prostate gland acinus development // inferred from sequence or structural similarity /// 0060595 // fibroblast growth factor receptor signaling pathway involved in mammary gland specification // inferred from sequence or structural similarity /// 0060601 // lateral sprouting from an epithelium // inferred from sequence or structural similarity /// 0060615 // mammary gland bud formation // inferred from sequence or structural similarity /// 0060664 // epithelial cell proliferation involved in salivary gland morphogenesis // inferred from sequence or structural similarity /// 0060667 // branch elongation involved in salivary gland morphogenesis // inferred from sequence or structural similarity /// 0060670 // branching involved in labyrinthine layer morphogenesis // inferred from sequence or structural similarity /// 0060687 // regulation of branching involved in prostate gland morphogenesis // inferred from sequence or structural similarity /// 0060688 // regulation of morphogenesis of a branching structure // inferred from sequence or structural similarity /// 0060915 // mesenchymal cell differentiation involved in lung development // inferred from sequence or structural similarity /// 0060916 // mesenchymal cell proliferation involved in lung development // inferred from sequence or structural similarity /// 0070372 // regulation of ERK1 and ERK2 cascade // inferred from sequence or structural similarity /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from sequence or structural similarity /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from sequence or structural similarity","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0005938 // cell cortex // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0060076 // excitatory synapse // inferred from sequence or structural similarity","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // non-traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from direct assay /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from physical interaction /// 0005007 // fibroblast growth factor-activated receptor activity // non-traceable author statement /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017134 // fibroblast growth factor binding // inferred from direct assay /// 0017134 // fibroblast growth factor binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction","chr10:123237844-123356159 (-) // 98.44 // q26.13"]
["11716548_x_at",0.5208421,0.31081724,0.20474386,-0.2072115,-0.20474434,-0.24185753,0.005185627,0.0038445531,1.4777534,0.5634055,1.4777534,"up","FGFR1",2260,"0000165 // MAPK cascade // traceable author statement /// 0001501 // skeletal system development // traceable author statement /// 0001764 // neuron migration // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from genetic interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from physical interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0010518 // positive regulation of phospholipase activity // traceable author statement /// 0010863 // positive regulation of phospholipase C activity // inferred from direct assay /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // traceable author statement /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0043009 // chordate embryonic development // traceable author statement /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0043410 // positive regulation of MAPK cascade // inferred from mutant phenotype /// 0045595 // regulation of cell differentiation // traceable author statement /// 0045666 // positive regulation of neuron differentiation // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048705 // skeletal system morphogenesis // traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from direct assay /// 0005007 // fibroblast growth factor-activated receptor activity // traceable author statement /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from direct assay /// 0008201 // heparin binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017134 // fibroblast growth factor binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction","chr8:38267736-38326352 (-) // 88.37 // p11.23"]
["11715584_a_at",0.28509235,0.26183224,0.3152523,-0.43153477,-0.26183224,-0.3133936,0.0012233602,0.0002900217,1.540052,0.62297916,1.540052,"up","CAV1",857,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000165 // MAPK cascade // inferred from electronic annotation /// 0000188 // inactivation of MAPK activity // inferred from sequence or structural similarity /// 0000188 // inactivation of MAPK activity // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from sequence or structural similarity /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from sequence or structural similarity /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001937 // negative regulation of endothelial cell proliferation // inferred from sequence or structural similarity /// 0001937 // negative regulation of endothelial cell proliferation // inferred from electronic annotation /// 0001960 // negative regulation of cytokine-mediated signaling pathway // inferred from electronic annotation /// 0006641 // triglyceride metabolic process // inferred from sequence or structural similarity /// 0006641 // triglyceride metabolic process // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from sequence or structural similarity /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from sequence or structural similarity /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0006940 // regulation of smooth muscle contraction // inferred from sequence or structural similarity /// 0006940 // regulation of smooth muscle contraction // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from sequence or structural similarity /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008104 // protein localization // inferred from sequence or structural similarity /// 0008104 // protein localization // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // inferred from mutant phenotype /// 0009267 // cellular response to starvation // inferred from expression pattern /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009967 // positive regulation of signal transduction // inferred from electronic annotation /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation /// 0010332 // response to gamma radiation // inferred from electronic annotation /// 0010524 // positive regulation of calcium ion transport into cytosol // inferred from sequence or structural similarity /// 0010524 // positive regulation of calcium ion transport into cytosol // inferred from electronic annotation /// 0010952 // positive regulation of peptidase activity // inferred from sequence or structural similarity /// 0010952 // positive regulation of peptidase activity // inferred from electronic annotation /// 0016050 // vesicle organization // inferred from direct assay /// 0019217 // regulation of fatty acid metabolic process // inferred from sequence or structural similarity /// 0019217 // regulation of fatty acid metabolic process // inferred from electronic annotation /// 0019915 // lipid storage // inferred from sequence or structural similarity /// 0019915 // lipid storage // inferred from electronic annotation /// 0030193 // regulation of blood coagulation // inferred from mutant phenotype /// 0030301 // cholesterol transport // traceable author statement /// 0030514 // negative regulation of BMP signaling pathway // inferred from direct assay /// 0030857 // negative regulation of epithelial cell differentiation // inferred from sequence or structural similarity /// 0030857 // negative regulation of epithelial cell differentiation // inferred from electronic annotation /// 0030879 // mammary gland development // inferred from sequence or structural similarity /// 0030879 // mammary gland development // inferred from electronic annotation /// 0031116 // positive regulation of microtubule polymerization // inferred from electronic annotation /// 0031295 // T cell costimulation // inferred from direct assay /// 0032091 // negative regulation of protein binding // inferred from direct assay /// 0032507 // maintenance of protein location in cell // inferred from sequence or structural similarity /// 0032507 // maintenance of protein location in cell // inferred from electronic annotation /// 0032570 // response to progesterone stimulus // inferred from direct assay /// 0033137 // negative regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0033344 // cholesterol efflux // inferred from electronic annotation /// 0033484 // nitric oxide homeostasis // inferred from sequence or structural similarity /// 0033484 // nitric oxide homeostasis // inferred from electronic annotation /// 0042310 // vasoconstriction // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042524 // negative regulation of tyrosine phosphorylation of Stat5 protein // inferred from electronic annotation /// 0042632 // cholesterol homeostasis // inferred from sequence or structural similarity /// 0042632 // cholesterol homeostasis // traceable author statement /// 0042632 // cholesterol homeostasis // inferred from electronic annotation /// 0043407 // negative regulation of MAP kinase activity // inferred from electronic annotation /// 0043409 // negative regulation of MAPK cascade // inferred from sequence or structural similarity /// 0043409 // negative regulation of MAPK cascade // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from direct assay /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045019 // negative regulation of nitric oxide biosynthetic process // inferred from sequence or structural similarity /// 0045019 // negative regulation of nitric oxide biosynthetic process // inferred from electronic annotation /// 0045768 // positive regulation of anti-apoptosis // inferred from electronic annotation /// 0045807 // positive regulation of endocytosis // inferred from electronic annotation /// 0045907 // positive regulation of vasoconstriction // inferred from sequence or structural similarity /// 0045907 // positive regulation of vasoconstriction // inferred from electronic annotation /// 0046209 // nitric oxide metabolic process // traceable author statement /// 0046426 // negative regulation of JAK-STAT cascade // inferred from sequence or structural similarity /// 0046426 // negative regulation of JAK-STAT cascade // inferred from electronic annotation /// 0046785 // microtubule polymerization // inferred from electronic annotation /// 0048554 // positive regulation of metalloenzyme activity // inferred from sequence or structural similarity /// 0048554 // positive regulation of metalloenzyme activity // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement /// 0050999 // regulation of nitric-oxide synthase activity // traceable author statement /// 0051259 // protein oligomerization // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from sequence or structural similarity /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051480 // cytosolic calcium ion homeostasis // inferred from direct assay /// 0051592 // response to calcium ion // inferred from sequence or structural similarity /// 0051592 // response to calcium ion // inferred from electronic annotation /// 0051899 // membrane depolarization // inferred from sequence or structural similarity /// 0051899 // membrane depolarization // inferred from electronic annotation /// 0052547 // regulation of peptidase activity // inferred from sequence or structural similarity /// 0052547 // regulation of peptidase activity // inferred from electronic annotation /// 0055074 // calcium ion homeostasis // inferred from sequence or structural similarity /// 0055074 // calcium ion homeostasis // inferred from electronic annotation /// 0060056 // mammary gland involution // inferred from sequence or structural similarity /// 0060056 // mammary gland involution // inferred from electronic annotation /// 0070836 // caveola assembly // inferred from mutant phenotype /// 0071455 // cellular response to hyperoxia // inferred from mutant phenotype /// 0072584 // caveolin-mediated endocytosis // inferred from direct assay /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from sequence or structural similarity /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from mutant phenotype /// 2000286 // receptor internalization involved in canonical Wnt receptor signaling pathway // inferred from mutant phenotype /// 2001238 // positive regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype","0000139 // Golgi membrane // inferred from direct assay /// 0000139 // Golgi membrane // traceable author statement /// 0000139 // Golgi membrane // inferred from electronic annotation /// 0000299 // integral to membrane of membrane fraction // inferred from electronic annotation /// 0002080 // acrosomal membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from direct assay /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005811 // lipid particle // traceable author statement /// 0005811 // lipid particle // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0005901 // caveola // inferred from direct assay /// 0005901 // caveola // non-traceable author statement /// 0005901 // caveola // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0009925 // basal plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from direct assay /// 0019861 // flagellum // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0031410 // cytoplasmic vesicle // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay /// 0045121 // membrane raft // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000149 // SNARE binding // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005113 // patched binding // inferred from physical interaction /// 0005198 // structural molecule activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0015485 // cholesterol binding // traceable author statement /// 0016504 // peptidase activator activity // inferred from sequence or structural similarity /// 0016504 // peptidase activator activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019900 // kinase binding // inferred from electronic annotation /// 0019905 // syntaxin binding // inferred from electronic annotation /// 0032947 // protein complex scaffold // traceable author statement /// 0050998 // nitric-oxide synthase binding // inferred from physical interaction","chr7:116164838-116201230 (+) // 89.57 // q31.2"]
["11725056_a_at",0.2928586,0.2515025,0.42125177,-0.25150204,-0.38425827,-0.29211807,0.0016089604,0.00060944003,1.5488138,0.6311637,1.5488138,"up","NEDD9",4739,"0007010 // cytoskeleton organization // non-traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007229 // integrin-mediated signaling pathway // non-traceable author statement /// 0040008 // regulation of growth // inferred from electronic annotation /// 0051017 // actin filament bundle assembly // non-traceable author statement /// 0051301 // cell division // inferred from electronic annotation","0000922 // spindle pole // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005819 // spindle // traceable author statement /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr6:11183530-11232908 (-) // 97.73 // p24.2"]
["11719398_s_at",0.32915688,0.2040062,0.20364189,-0.20837402,-0.20364189,-0.3081665,0.0018405084,0.0008409903,1.4002286,0.48566246,1.4002286,"up","RRAGC",64121,"0006184 // GTP catabolic process // inferred from direct assay /// 0006351 // transcription, DNA-dependent // non-traceable author statement /// 0006915 // apoptotic process // non-traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0008380 // RNA splicing // non-traceable author statement /// 0016049 // cell growth // non-traceable author statement /// 0032008 // positive regulation of TOR signaling cascade // non-traceable author statement /// 0034613 // cellular protein localization // inferred from sequence or structural similarity /// 0071230 // cellular response to amino acid stimulus // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // non-traceable author statement /// 0003924 // GTPase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from electronic annotation /// 0019003 // GDP binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction","chr1:39303869-39325491 (-) // 91.45 // p34.3"]
["11735129_a_at",0.16569853,0.26429653,0.23512793,-0.5050788,-0.36123323,-0.16569853,0.0066572223,0.005281087,1.480117,0.5657112,1.480117,"up","SPC24",147841,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0031262 // Ndc80 complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr19:11256483-11266484 (-) // 39.8 // p13.2"]
["11723383_a_at",0.17187977,0.12327194,0.13630486,-0.12327194,-0.39683914,-0.33058882,0.008378251,0.0069433306,1.3447943,0.42738548,1.3447943,"up","PRR3",80742,"","","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:30524662-30532563 (+) // 86.84 // p21.33"]
["11722503_at",0.27173233,0.5903702,0.68226194,-0.39807224,-0.27173233,-0.40382195,0.0039384346,0.0026866843,1.8310404,0.8726636,1.8310404,"up","ITGB8",3696,"0001573 // ganglioside metabolic process // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0060674 // placenta blood vessel development // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0008305 // integrin complex // inferred from electronic annotation /// 0008305 // integrin complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from electronic annotation","chr7:20370724-20455382 (+) // 90.43 // p21.1"]
["11744083_at",0.100942135,0.12845135,0.08466816,-0.08466768,-0.3351555,-0.49683714,0.028420169,0.027220696,1.3289075,0.41024065,1.3289075,"up","ANKIB1",54467,"","","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:91875496-92030697 (+) // 99.09 // q21.2"]
["11744739_a_at",0.18681955,0.16280746,0.123019695,-0.22292519,-0.39337158,-0.123019695,0.009042348,0.0075859143,1.3231602,0.4039877,1.3231602,"up","UBAP2L",9898,"0007339 // binding of sperm to zona pellucida // inferred from mutant phenotype","0005671 // Ada2/Gcn5/Ada3 transcription activator complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr1:154196959-154243981 (+) // 95.95 // q21.3"]
["11731613_a_at",0.33489084,0.13138628,0.15509272,-0.18523884,-0.20879745,-0.1313858,0.006321074,0.0049790028,1.3033856,0.38226396,1.3033856,"up","RHEBL1",121268,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0031929 // TOR signaling cascade // inferred from mutant phenotype /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from electronic annotation","chr12:49458327-49463792 (-) // 89.06 // q13.12"]
["11732278_at",0.30209446,0.22585392,0.21374989,-0.21374989,-0.21988487,-0.2517929,0.0008452798,9.319191e-5,1.390601,0.47570863,1.390601,"up","FOXP1",27086,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0002053 // positive regulation of mesenchymal cell proliferation // not recorded /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0002329 // pre-B cell differentiation // not recorded /// 0002329 // pre-B cell differentiation // inferred from electronic annotation /// 0002639 // positive regulation of immunoglobulin production // not recorded /// 0002639 // positive regulation of immunoglobulin production // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007389 // pattern specification process // not recorded /// 0007507 // heart development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // not recorded /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from electronic annotation /// 0009790 // embryo development // not recorded /// 0009790 // embryo development // inferred from electronic annotation /// 0021517 // ventral spinal cord development // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0033152 // immunoglobulin V(D)J recombination // not recorded /// 0033152 // immunoglobulin V(D)J recombination // inferred from electronic annotation /// 0045214 // sarcomere organization // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048745 // smooth muscle tissue development // not recorded /// 0048745 // smooth muscle tissue development // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // not recorded /// 0055007 // cardiac muscle cell differentiation // not recorded /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0060043 // regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0060501 // positive regulation of epithelial cell proliferation involved in lung morphogenesis // not recorded /// 0072358 // cardiovascular system development // inferred from electronic annotation /// 2000727 // positive regulation of cardiac muscle cell differentiation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // not recorded /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // not recorded","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // not recorded /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // not recorded /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008134 // transcription factor binding // not recorded /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008301 // DNA binding, bending // not recorded /// 0042803 // protein homodimerization activity // not recorded /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // not recorded /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr3:71004732-71633140 (-) // 97.21 // p13"]
["11733792_a_at",0.124056816,0.096918106,0.14087296,-0.096918106,-0.34771156,-0.37389135,0.012968428,0.011596085,1.3135365,0.3934563,1.3135365,"up","SLC25A12",8604,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015810 // aspartate transport // inferred from direct assay /// 0015813 // L-glutamate transport // inferred from direct assay /// 0043490 // malate-aspartate shuttle // inferred from direct assay /// 0043490 // malate-aspartate shuttle // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0051592 // response to calcium ion // inferred from direct assay /// 0055085 // transmembrane transport // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005313 // L-glutamate transmembrane transporter activity // inferred from direct assay /// 0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0015183 // L-aspartate transmembrane transporter activity // inferred from direct assay","chr2:172639129-172751013 (-) // 81.4 // q31.1"]
["11729317_a_at",0.32237244,0.21757507,0.3039322,-0.26547337,-0.30185223,-0.21757507,0.0010510733,0.00017880015,1.4569252,0.5429268,1.4569252,"up","UACA",55075,"0008630 // DNA damage response, signal transduction resulting in induction of apoptosis // inferred from electronic annotation /// 0008631 // induction of apoptosis by oxidative stress // inferred from electronic annotation /// 0009411 // response to UV // inferred from electronic annotation /// 0042307 // positive regulation of protein import into nucleus // inferred from electronic annotation /// 0042347 // negative regulation of NF-kappaB import into nucleus // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0050728 // negative regulation of inflammatory response // inferred from electronic annotation","0005576 // extracellular region // non-traceable author statement /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0043293 // apoptosome // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr15:70946894-70994647 (-) // 94.49 // q23"]
["11750554_a_at",0.603353,0.6968317,0.6914711,-0.603353,-0.749228,-0.8249812,0.00067191356,4.1885378e-5,2.6203134,1.3897394,2.6203134,"up","NEDD4",4734,"0006464 // cellular protein modification process // inferred from electronic annotation /// 0006622 // protein targeting to lysosome // inferred from direct assay /// 0007041 // lysosomal transport // inferred from direct assay /// 0007399 // nervous system development // inferred from electronic annotation /// 0010766 // negative regulation of sodium ion transport // inferred from direct assay /// 0010766 // negative regulation of sodium ion transport // inferred from electronic annotation /// 0010768 // negative regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage // inferred from mutant phenotype /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // inferred from mutant phenotype /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0019089 // transmission of virus // inferred from mutant phenotype /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0030948 // negative regulation of vascular endothelial growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0030948 // negative regulation of vascular endothelial growth factor receptor signaling pathway // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from expression pattern /// 0031623 // receptor internalization // inferred from direct assay /// 0032801 // receptor catabolic process // inferred from direct assay /// 0034644 // cellular response to UV // inferred from mutant phenotype /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0042921 // glucocorticoid receptor signaling pathway // inferred from direct assay /// 0043162 // ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway // inferred from mutant phenotype /// 0044111 // development involved in symbiotic interaction // inferred from mutant phenotype /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045732 // positive regulation of protein catabolic process // inferred from direct assay /// 0045732 // positive regulation of protein catabolic process // inferred from electronic annotation /// 0046824 // positive regulation of nucleocytoplasmic transport // inferred from direct assay /// 0048814 // regulation of dendrite morphogenesis // inferred from sequence or structural similarity /// 0048814 // regulation of dendrite morphogenesis // inferred from electronic annotation /// 0050847 // progesterone receptor signaling pathway // inferred from direct assay /// 0051592 // response to calcium ion // traceable author statement /// 0070534 // protein K63-linked ubiquitination // inferred from sequence or structural similarity","0000151 // ubiquitin ligase complex // inferred from sequence or structural similarity /// 0000151 // ubiquitin ligase complex // inferred from electronic annotation /// 0000785 // chromatin // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // not recorded /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from mutant phenotype /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005938 // cell cortex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016327 // apicolateral plasma membrane // traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0019871 // sodium channel inhibitor activity // inferred from direct assay /// 0019871 // sodium channel inhibitor activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0031698 // beta-2 adrenergic receptor binding // inferred from direct assay /// 0043130 // ubiquitin binding // inferred from direct assay /// 0050815 // phosphoserine binding // inferred from sequence or structural similarity /// 0050815 // phosphoserine binding // inferred from electronic annotation /// 0050816 // phosphothreonine binding // inferred from sequence or structural similarity /// 0050816 // phosphothreonine binding // inferred from electronic annotation /// 0070063 // RNA polymerase binding // inferred from physical interaction /// 0070064 // proline-rich region binding // inferred from mutant phenotype /// 0070064 // proline-rich region binding // inferred from physical interaction /// 0070064 // proline-rich region binding // inferred from electronic annotation","chr15:56119532-56209306 (-) // 94.93 // q21.3"]
["11728184_a_at",0.3304844,0.19350195,0.23690748,-0.19350195,-0.22454786,-0.23953009,0.001350818,0.0003758701,1.3878239,0.47282457,1.3878239,"up","PLEKHA7",144100,"0045218 // zonula adherens maintenance // inferred from mutant phenotype /// 0090136 // epithelial cell-cell adhesion // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0005915 // zonula adherens // inferred from direct assay /// 0030054 // cell junction // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation /// 0070097 // delta-catenin binding // inferred from direct assay","chr11:16809030-17035963 (-) // 97.85 // p15.1"]
["11724668_at",0.4978981,0.43944836,0.40280247,-0.40280247,-0.4654274,-0.5514507,0.00070557836,5.6481284e-5,1.8920408,0.9199432,1.8920408,"up","INSL4",3641,"0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0007565 // female pregnancy // traceable author statement /// 0008283 // cell proliferation // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005625 // soluble fraction // traceable author statement","0005102 // receptor binding // traceable author statement /// 0005159 // insulin-like growth factor receptor binding // traceable author statement /// 0005179 // hormone activity // inferred from electronic annotation","chr9:5231401-5235528 (+) // 89.08 // p24.1"]
["11736245_a_at",0.18655252,0.24600315,0.15406322,-0.15406322,-0.18980503,-0.2779317,0.0019103753,0.00090664666,1.322077,0.40280628,1.322077,"up","PRKAG2",51422,"0005977 // glycogen metabolic process // inferred from mutant phenotype /// 0006110 // regulation of glycolysis // inferred from mutant phenotype /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006469 // negative regulation of protein kinase activity // inferred from direct assay /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006754 // ATP biosynthetic process // traceable author statement /// 0006853 // carnitine shuttle // traceable author statement /// 0007050 // cell cycle arrest // traceable author statement /// 0007243 // intracellular protein kinase cascade // inferred from mutant phenotype /// 0008152 // metabolic process // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0010800 // positive regulation of peptidyl-threonine phosphorylation // inferred from mutant phenotype /// 0016126 // sterol biosynthetic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019217 // regulation of fatty acid metabolic process // inferred from mutant phenotype /// 0042304 // regulation of fatty acid biosynthetic process // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045860 // positive regulation of protein kinase activity // inferred from mutant phenotype /// 0046320 // regulation of fatty acid oxidation // traceable author statement /// 0046324 // regulation of glucose import // traceable author statement /// 0050790 // regulation of catalytic activity // inferred from electronic annotation","0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0031588 // AMP-activated protein kinase complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004679 // AMP-activated protein kinase activity // inferred from electronic annotation /// 0004862 // cAMP-dependent protein kinase inhibitor activity // inferred from direct assay /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0008603 // cAMP-dependent protein kinase regulator activity // inferred from mutant phenotype /// 0008607 // phosphorylase kinase regulator activity // inferred from mutant phenotype /// 0016208 // AMP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from direct assay /// 0030295 // protein kinase activator activity // inferred from mutant phenotype /// 0043531 // ADP binding // inferred from direct assay","chr7:151253209-151329439 (-) // 93.91 // q36.1"]
["11736167_a_at",0.34866714,0.28668976,0.27404213,-0.27404213,-0.36850548,-0.34497452,0.00073653937,6.569419e-5,1.5500417,0.63230705,1.5500417,"up","CCDC34",91057,"","","","chr11:27370418-27384795 (-) // 92.04 // p14.1"]
["11728799_at",0.17866516,0.14525795,0.2162857,-0.3373003,-0.14525795,-0.17937994,0.004360689,0.0030605765,1.3201627,0.40071568,1.3201627,"up","IMMP2L",83943,"0001541 // ovarian follicle development // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006627 // protein processing involved in protein targeting to mitochondrion // inferred from sequence or structural similarity /// 0006627 // protein processing involved in protein targeting to mitochondrion // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030728 // ovulation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042720 // mitochondrial inner membrane peptidase complex // inferred from sequence or structural similarity /// 0042720 // mitochondrial inner membrane peptidase complex // inferred from electronic annotation","0008233 // peptidase activity // inferred from sequence or structural similarity /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr7:110303112-111202347 (-) // 95.84 // q31.1"]
["11727713_at",0.19433784,0.24052525,0.22576714,-0.37357044,-0.19433784,-0.21187973,0.0022579338,0.0012125941,1.3948784,0.4801394,1.3948784,"up","LOC100653095","100653095 /// 3768","0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // traceable author statement /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0008015 // blood circulation // non-traceable author statement /// 0008016 // regulation of heart contraction // traceable author statement /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030315 // T-tubule // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005242 // inward rectifier potassium channel activity // inferred from electronic annotation /// 0005242 // inward rectifier potassium channel activity // inferred from direct assay /// 0005242 // inward rectifier potassium channel activity // traceable author statement /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0008200 // ion channel inhibitor activity // traceable author statement /// 0015459 // potassium channel regulator activity // traceable author statement /// 0030165 // PDZ domain binding // inferred from electronic annotation","chr17:21279508-21323181 (+) // 97.8 // p11.2"]
["11748452_a_at",0.2378602,0.21924448,0.24972868,-0.219244,-0.29348946,-0.22058916,0.00070557836,5.1273848e-5,1.394794,0.480052,1.394794,"up","C9orf100",84904,"0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation","chr9:35662888-35665190 (-) // 99.9 // p13.3"]
["11724959_s_at",0.1477766,0.30043507,0.34254646,-0.22941923,-0.14777613,-0.17296648,0.0033916372,0.0021982833,1.3631774,0.44697332,1.3631774,"up","CDK14",5218,"0000086 // G2/M transition of mitotic cell cycle // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0060828 // regulation of canonical Wnt receptor signaling pathway // inferred from direct assay","0000308 // cytoplasmic cyclin-dependent protein kinase holoenzyme complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004693 // cyclin-dependent protein kinase activity // inferred from mutant phenotype /// 0004693 // cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0030332 // cyclin binding // inferred from physical interaction","chr7:90338711-90839904 (+) // 96.52 // q21.13"]
["11727840_at",0.49699497,0.38466358,0.21511555,-0.21511507,-0.27564716,-0.27480364,0.0029613448,0.0018153565,1.5377063,0.62078,1.5377063,"up","HPD",3242,"0006559 // L-phenylalanine catabolic process // inferred from electronic annotation /// 0006559 // L-phenylalanine catabolic process // traceable author statement /// 0006572 // tyrosine catabolic process // inferred from sequence or structural similarity /// 0006572 // tyrosine catabolic process // inferred from electronic annotation /// 0006572 // tyrosine catabolic process // traceable author statement /// 0009072 // aromatic amino acid family metabolic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003868 // 4-hydroxyphenylpyruvate dioxygenase activity // not recorded /// 0003868 // 4-hydroxyphenylpyruvate dioxygenase activity // inferred from sequence or structural similarity /// 0003868 // 4-hydroxyphenylpyruvate dioxygenase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016701 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:122087612-122326517 (-) // 91.18 // q24.31"]
["11756164_s_at",0.33373642,0.22282219,0.27239895,-0.22282219,-0.26541424,-0.26974392,0.00089824985,0.00011682664,1.4429079,0.5289793,1.4429079,"up","ADIPOR2",79602,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0009755 // hormone-mediated signaling pathway // inferred from sequence or structural similarity /// 0019395 // fatty acid oxidation // inferred from sequence or structural similarity","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0042562 // hormone binding // inferred from sequence or structural similarity /// 0042802 // identical protein binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr12:1896887-1897845 (+) // 96.11 // p13.33"]
["11763803_a_at",0.1620717,0.18310928,0.15472698,-0.28739262,-0.15472746,-0.3082204,0.0020402276,0.0010332874,1.3349165,0.41674948,1.3349165,"up","TMEM67",91147,"0010826 // negative regulation of centrosome duplication // inferred from mutant phenotype /// 0030030 // cell projection organization // inferred from electronic annotation /// 0030433 // ER-associated protein catabolic process // inferred from mutant phenotype /// 0042384 // cilium assembly // inferred from mutant phenotype /// 0042384 // cilium assembly // inferred from electronic annotation /// 0060271 // cilium morphogenesis // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from direct assay /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0036038 // TCTN-B9D complex // inferred from sequence or structural similarity /// 0042995 // cell projection // inferred from electronic annotation /// 0060170 // cilium membrane // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0031005 // filamin binding // inferred from physical interaction /// 0051082 // unfolded protein binding // inferred from physical interaction","chr8:94767122-94822199 (+) // 97.08 // q22.1"]
["11753179_s_at",0.15013313,0.2308445,0.18316555,-0.15013313,-0.27897167,-0.38911915,0.0045107757,0.0032092168,1.3762944,0.46078902,1.3762944,"up","FAM134B",54463,"0019233 // sensory perception of pain // inferred from mutant phenotype","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005801 // cis-Golgi network // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr5:16473147-16478174 (-) // 89.2 // p15.1"]
["11745066_a_at",0.58384895,0.35616112,0.46445656,-0.43323946,-0.35616064,-0.547338,0.0014306394,0.0004455924,1.8839164,0.9137349,1.8839164,"up","MYT1L",23040,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:1792894-2335026 (-) // 94.04 // p25.3"]
["11743095_at",0.33021688,0.3958931,0.24856806,-0.39181042,-0.24856853,-0.45488644,0.0017505207,0.0007535252,1.6132624,0.6899811,1.6132624,"up","TMEM65",157378,"","0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr8:125323160-125384940 (-) // 94.28 // q24.13"]
["11747902_a_at",0.27298117,0.2736683,0.24318123,-0.24318123,-0.2589407,-0.28078842,0.00035482424,3.820244e-6,1.4381828,0.52424705,1.4381828,"up","EML1",2009,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005875 // microtubule associated complex // traceable author statement","0005509 // calcium ion binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr14:100239285-100406661 (+) // 94.55 // q32.2"]
["11715251_at",0.30463648,0.21179676,0.22068071,-0.29059887,-0.21179676,-0.288352,0.001091852,0.00020487046,1.4233469,0.50928724,1.4233469,"up","CHST7",56548,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005976 // polysaccharide metabolic process // traceable author statement /// 0006044 // N-acetylglucosamine metabolic process // inferred from direct assay /// 0006790 // sulfur compound metabolic process // inferred from direct assay /// 0030206 // chondroitin sulfate biosynthetic process // inferred from direct assay","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0001517 // N-acetylglucosamine 6-O-sulfotransferase activity // inferred from direct assay /// 0008146 // sulfotransferase activity // inferred from electronic annotation /// 0008459 // chondroitin 6-sulfotransferase activity // inferred from direct assay /// 0008459 // chondroitin 6-sulfotransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chrX:46433191-46457837 (+) // 94.94 // p11.23"]
["11719292_a_at",0.37299538,0.25217915,0.3110032,-0.25217867,-0.6852932,-0.83466864,0.008566836,0.00713903,1.869656,0.9027728,1.869656,"up","ITGB1BP1",9270,"0007160 // cell-matrix adhesion // inferred from direct assay /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // traceable author statement /// 0016477 // cell migration // traceable author statement","0001726 // ruffle // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // non-traceable author statement /// 0030027 // lamellipodium // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr2:9545809-9563695 (-) // 98.95 // p25.1"]
["11741433_a_at",0.15806198,0.3096323,0.27587032,-0.16389179,-0.15893555,-0.15806198,0.0018968133,0.0008895908,1.3269843,0.40815133,1.3269843,"up","ARCN1",372,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // traceable author statement /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0048205 // COPI coating of Golgi vesicle // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030126 // COPI vesicle coat // inferred from sequence or structural similarity /// 0030131 // clathrin adaptor complex // inferred from electronic annotation /// 0030663 // COPI coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","","chr11:118443101-118473745 (+) // 90.9 // q23.3"]
["11717663_a_at",0.23218822,0.16915321,0.2150569,-0.16915321,-0.21505642,-0.21234083,0.0007584205,7.2575895e-5,1.3234615,0.40431625,1.3234615,"up","KLHL12",59349,"0006513 // protein monoubiquitination // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from direct assay /// 0016055 // Wnt receptor signaling pathway // inferred from mutant phenotype /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0048208 // COPII vesicle coating // inferred from mutant phenotype","0030134 // ER to Golgi transport vesicle // inferred from direct assay /// 0030134 // ER to Golgi transport vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031463 // Cul3-RING ubiquitin ligase complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr1:202860247-202896390 (-) // 93.11 // q32.1"]
["11740778_x_at",0.5029993,0.6416111,0.725173,-0.542191,-0.5512023,-0.5029988,0.00073132804,6.425104e-5,2.2274482,1.1553919,2.2274482,"up","KIAA0825",285600,"","","","chr5:93486555-93954309 (-) // 88.07 // q15"]
["11721770_x_at",0.35361195,0.19835854,0.44119787,-0.28756428,-0.19835854,-0.3149824,0.0027702658,0.0016523765,1.5136424,0.5980245,1.5136424,"up","CCDC64",92558,"0006810 // transport // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0055107 // Golgi to secretory granule transport // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from sequence or structural similarity /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0017137 // Rab GTPase binding // inferred from sequence or structural similarity /// 0034452 // dynactin binding // inferred from sequence or structural similarity","chr12:120427547-120532298 (+) // 95.24 // q24.23"]
["11725334_at",0.54482603,0.54359436,0.60623693,-0.5986681,-0.54359436,-0.75640774,0.0007085977,5.7676556e-5,2.2938576,1.1977758,2.2938576,"up","MZT1",440145,"0033566 // gamma-tubulin complex localization // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0008274 // gamma-tubulin ring complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr13:73282504-73302001 (-) // 96.63 // q21.33"]
["11747886_a_at",0.16261482,0.116337776,0.12150097,-0.116337776,-0.26591206,-0.3998003,0.010486735,0.009041535,1.3141845,0.3941679,1.3141845,"up","RAD51AP1",10635,"0000724 // double-strand break repair via homologous recombination // non-traceable author statement /// 0006281 // DNA repair // non-traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from direct assay /// 0003690 // double-stranded DNA binding // traceable author statement /// 0003697 // single-stranded DNA binding // inferred from direct assay /// 0003697 // single-stranded DNA binding // traceable author statement /// 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr12:4648016-4668496 (+) // 99.2 // p13.32"]
["11737063_a_at",0.08654547,0.13154316,0.13401794,-0.51568747,-0.08654547,-0.18407059,0.04527035,0.044061583,1.3008639,0.37947002,1.3008639,"up","MTL5",9633,"0006875 // cellular metal ion homeostasis // non-traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // non-traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0010038 // response to metal ion // non-traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation","0005625 // soluble fraction // inferred from sequence or structural similarity /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation","0046872 // metal ion binding // non-traceable author statement","chr11:68503599-68519032 (-) // 86.02 // q13.3"]
["11745739_a_at",0.24760342,0.26189852,0.2717476,-0.24788809,-0.24760294,-0.48516798,0.002928729,0.001785995,1.5024352,0.5873028,1.5024352,"up","SCOC",60592,"0016239 // positive regulation of macroautophagy // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr4:141294663-141302830 (+) // 93.69 // q31.1"]
["11759552_at",0.3290205,0.24190569,0.28350687,-0.34240294,-0.24190569,-0.2791071,0.00091646257,0.00012077414,1.4872181,0.5726162,1.4872181,"up","MPI",4351,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0009298 // GDP-mannose biosynthetic process // inferred from electronic annotation /// 0009298 // GDP-mannose biosynthetic process // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004476 // mannose-6-phosphate isomerase activity // inferred from electronic annotation /// 0004476 // mannose-6-phosphate isomerase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:75182376-75191778 (+) // 84.15 // q24.1"]
["11724942_x_at",0.5379491,0.15894222,0.10871315,-0.10871315,-0.14078188,-0.115246296,0.046502918,0.04538104,1.3104981,0.39011526,1.3104981,"up","MAPK8IP2",23542,"0000165 // MAPK cascade // inferred from direct assay /// 0001662 // behavioral fear response // inferred from sequence or structural similarity /// 0001662 // behavioral fear response // inferred from electronic annotation /// 0007172 // signal complex assembly // traceable author statement /// 0007254 // JNK cascade // inferred from electronic annotation /// 0007617 // mating behavior // inferred from electronic annotation /// 0010469 // regulation of receptor activity // inferred from sequence or structural similarity /// 0010469 // regulation of receptor activity // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032874 // positive regulation of stress-activated MAPK cascade // inferred from electronic annotation /// 0035176 // social behavior // inferred from sequence or structural similarity /// 0035176 // social behavior // inferred from electronic annotation /// 0045768 // positive regulation of anti-apoptosis // non-traceable author statement /// 0045860 // positive regulation of protein kinase activity // inferred from direct assay /// 0045860 // positive regulation of protein kinase activity // inferred from genetic interaction /// 0046328 // regulation of JNK cascade // inferred from direct assay /// 0046958 // nonassociative learning // inferred from sequence or structural similarity /// 0046958 // nonassociative learning // inferred from electronic annotation /// 0048813 // dendrite morphogenesis // inferred from sequence or structural similarity /// 0048813 // dendrite morphogenesis // inferred from electronic annotation /// 0051966 // regulation of synaptic transmission, glutamatergic // inferred from sequence or structural similarity /// 0051966 // regulation of synaptic transmission, glutamatergic // inferred from electronic annotation /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from sequence or structural similarity /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from electronic annotation /// 2000310 // regulation of N-methyl-D-aspartate selective glutamate receptor activity // inferred from sequence or structural similarity /// 2000310 // regulation of N-methyl-D-aspartate selective glutamate receptor activity // inferred from electronic annotation /// 2000311 // regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity // inferred from sequence or structural similarity /// 2000311 // regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from sequence or structural similarity /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0001540 // beta-amyloid binding // non-traceable author statement /// 0005078 // MAP-kinase scaffold activity // non-traceable author statement /// 0005198 // structural molecule activity // traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0019894 // kinesin binding // inferred from sequence or structural similarity /// 0019894 // kinesin binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0030295 // protein kinase activator activity // inferred from direct assay /// 0030295 // protein kinase activator activity // inferred from genetic interaction /// 0032403 // protein complex binding // inferred from electronic annotation","chr22:51039111-51049977 (+) // 87.96 // q13.33"]
["11721472_a_at",0.16445827,0.25144958,0.19335175,-0.16445827,-0.2385912,-0.19536495,0.001213793,0.00027218866,1.3218496,0.40255803,1.3218496,"up","HCCS",3052,"0009887 // organ morphogenesis // traceable author statement /// 0055114 // oxidation-reduction process // traceable author statement","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0004408 // holocytochrome-c synthase activity // inferred from electronic annotation /// 0004408 // holocytochrome-c synthase activity // traceable author statement /// 0016829 // lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:11129417-11141195 (+) // 91.07 // p22.2"]
["11719788_s_at",0.29900265,0.1870985,0.2294035,-0.1870985,-0.2978983,-0.40028286,0.0026605518,0.0015617278,1.4475315,0.5335947,1.4475315,"up","TUBB2A",7280,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0007017 // microtubule-based process // inferred from electronic annotation /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0051258 // protein polymerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation","chr6:3153911-3157809 (-) // 96.98 // p25.2"]
["11753421_a_at",0.17455816,0.13670778,0.1363883,-0.1363883,-0.4175396,-0.47295475,0.010849081,0.009426419,1.4059179,0.4915123,1.4059179,"up","CITED2",10370,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0001568 // blood vessel development // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from direct assay /// 0001666 // response to hypoxia // inferred from mutant phenotype /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001829 // trophectodermal cell differentiation // inferred from electronic annotation /// 0001841 // neural tube formation // inferred from electronic annotation /// 0001843 // neural tube closure // inferred from electronic annotation /// 0001889 // liver development // inferred from sequence or structural similarity /// 0001889 // liver development // inferred from electronic annotation /// 0001892 // embryonic placenta development // inferred from electronic annotation /// 0001944 // vasculature development // inferred from electronic annotation /// 0001947 // heart looping // inferred from electronic annotation /// 0002089 // lens morphogenesis in camera-type eye // inferred from electronic annotation /// 0002244 // hemopoietic progenitor cell differentiation // inferred from electronic annotation /// 0002521 // leukocyte differentiation // inferred from electronic annotation /// 0003151 // outflow tract morphogenesis // inferred from sequence or structural similarity /// 0003151 // outflow tract morphogenesis // inferred from electronic annotation /// 0003156 // regulation of organ formation // inferred from sequence or structural similarity /// 0003197 // endocardial cushion development // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from sequence or structural similarity /// 0006950 // response to stress // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from sequence or structural similarity /// 0007417 // central nervous system development // inferred from electronic annotation /// 0007422 // peripheral nervous system development // inferred from electronic annotation /// 0007507 // heart development // inferred from mutant phenotype /// 0007507 // heart development // inferred from sequence or structural similarity /// 0007530 // sex determination // inferred from sequence or structural similarity /// 0008283 // cell proliferation // inferred from direct assay /// 0008584 // male gonad development // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0010629 // negative regulation of gene expression // inferred from direct assay /// 0021602 // cranial nerve morphogenesis // inferred from electronic annotation /// 0022409 // positive regulation of cell-cell adhesion // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030325 // adrenal gland development // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from mutant phenotype /// 0030511 // positive regulation of transforming growth factor beta receptor signaling pathway // inferred from sequence or structural similarity /// 0030851 // granulocyte differentiation // inferred from electronic annotation /// 0034405 // response to fluid shear stress // inferred from mutant phenotype /// 0035360 // positive regulation of peroxisome proliferator activated receptor signaling pathway // inferred from direct assay /// 0035802 // adrenal cortex formation // inferred from sequence or structural similarity /// 0043627 // response to estrogen stimulus // inferred from direct assay /// 0045787 // positive regulation of cell cycle // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046697 // decidualization // inferred from electronic annotation /// 0048536 // spleen development // inferred from sequence or structural similarity /// 0048538 // thymus development // inferred from electronic annotation /// 0048596 // embryonic camera-type eye morphogenesis // inferred from electronic annotation /// 0048821 // erythrocyte development // inferred from electronic annotation /// 0060136 // embryonic process involved in female pregnancy // inferred from electronic annotation /// 0060349 // bone morphogenesis // inferred from electronic annotation /// 0060411 // cardiac septum morphogenesis // inferred from electronic annotation /// 0060412 // ventricular septum morphogenesis // inferred from sequence or structural similarity /// 0060971 // embryonic heart tube left/right pattern formation // inferred from sequence or structural similarity /// 0061156 // pulmonary artery morphogenesis // inferred from electronic annotation /// 0061308 // cardiac neural crest cell development involved in heart development // inferred from electronic annotation /// 0061371 // determination of heart left/right asymmetry // inferred from electronic annotation /// 0070986 // left/right axis specification // inferred from sequence or structural similarity /// 1900164 // nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry // inferred from sequence or structural similarity /// 2000020 // positive regulation of male gonad development // inferred from sequence or structural similarity","0000790 // nuclear chromatin // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from mutant phenotype /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from mutant phenotype","0001102 // RNA polymerase II activating transcription factor binding // inferred from electronic annotation /// 0001105 // RNA polymerase II transcription coactivator activity // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from sequence or structural similarity /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0046332 // SMAD binding // inferred from electronic annotation /// 0050693 // LBD domain binding // inferred from physical interaction","chr6:139694210-139695742 (-) // 99.89 // q24.1"]
["11734796_s_at",0.47293377,0.18805265,0.14682198,-0.21157932,-0.14682198,-0.23240042,0.012968428,0.011600098,1.3814692,0.4662034,1.3814692,"up","HIST1H2BI","8339 /// 8343 /// 8344 /// 8346 /// 8347","0006334 // nucleosome assembly // non-traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation","0000786 // nucleosome // non-traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr6:26215416-26216920 (-) // 47.43 // p22.2"]
["11741700_s_at",0.45042133,0.49298048,0.356153,-0.7039714,-0.356153,-0.74284554,0.0023907758,0.0013292384,2.0479422,1.0341749,2.0479422,"up","HIST1H2BJ",8970,"0006334 // nucleosome assembly // non-traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation","0000786 // nucleosome // non-traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr6:27099769-27100575 (-) // 99.5 // p22.1"]
["11745290_a_at",0.1923337,0.2292633,0.18509197,-0.18509197,-0.29210472,-0.3196602,0.0013953822,0.00041471564,1.3830454,0.4678486,1.3830454,"up","PHTF1",10745,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005801 // cis-Golgi network // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement","chr1:114246262-114302134 (-) // 91.25 // p13.2"]
["11719915_x_at",0.24518299,0.24330139,0.16119242,-0.24305344,-0.16119194,-0.3176403,0.0019911786,0.0009921592,1.3728628,0.45718747,1.3728628,"up","AIF1L",83543,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005884 // actin filament // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from direct assay","chr9:133971862-133998531 (+) // 85.97 // q34.12"]
["11753860_a_at",0.28073025,0.15523052,0.26379633,-0.23647308,-0.17701054,-0.15523052,0.0017953549,0.00079175,1.3405488,0.42282373,1.3405488,"up","GNG4",2786,"0006112 // energy reserve metabolic process // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // traceable author statement /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0071377 // cellular response to glucagon stimulus // traceable author statement","0005834 // heterotrimeric G-protein complex // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation","chr1:235715408-235747138 (-) // 99.56 // q42.3"]
["11715863_x_at",0.37894726,0.12786102,0.15408516,-0.20605564,-0.18918324,-0.12786102,0.010443292,0.008995083,1.314637,0.39466447,1.314637,"up","DDAH2",23564,"0000052 // citrulline metabolic process // inferred from direct assay /// 0006525 // arginine metabolic process // inferred from electronic annotation /// 0006527 // arginine catabolic process // traceable author statement /// 0006809 // nitric oxide biosynthetic process // traceable author statement /// 0006916 // anti-apoptosis // traceable author statement /// 0007263 // nitric oxide mediated signal transduction // traceable author statement /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation","0003824 // catalytic activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016403 // dimethylargininase activity // inferred from direct assay /// 0016403 // dimethylargininase activity // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016813 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines // inferred from electronic annotation","chr6:31694503-31698040 (-) // 97.15 // p21.33"]
["11748534_a_at",0.5359559,0.56609726,0.44967175,-0.5436821,-0.7062073,-0.44967175,0.0010877973,0.00019535379,2.119556,1.083762,2.119556,"up","DDAH1",23576,"0000052 // citrulline metabolic process // inferred from direct assay /// 0003073 // regulation of systemic arterial blood pressure // inferred from sequence or structural similarity /// 0003073 // regulation of systemic arterial blood pressure // inferred from electronic annotation /// 0006525 // arginine metabolic process // inferred from electronic annotation /// 0006527 // arginine catabolic process // traceable author statement /// 0007263 // nitric oxide mediated signal transduction // traceable author statement /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from sequence or structural similarity /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","0003824 // catalytic activity // traceable author statement /// 0016403 // dimethylargininase activity // inferred from direct assay /// 0016403 // dimethylargininase activity // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016813 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:85786543-85930280 (-) // 99.04 // p22.3"]
["11759302_at",0.25613594,0.18105125,0.19559193,-0.18105125,-0.25560188,-0.2227087,0.0010184328,0.00016622998,1.3479002,0.43071365,1.3479002,"up","ROCK2",9475,"0000910 // cytokinesis // inferred from electronic annotation /// 0000910 // cytokinesis // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006939 // smooth muscle contraction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0010825 // positive regulation of centrosome duplication // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from mutant phenotype /// 0030155 // regulation of cell adhesion // traceable author statement /// 0032956 // regulation of actin cytoskeleton organization // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0045616 // regulation of keratinocyte differentiation // inferred from mutant phenotype /// 0051298 // centrosome duplication // inferred from mutant phenotype /// 0051492 // regulation of stress fiber assembly // traceable author statement /// 0051893 // regulation of focal adhesion assembly // traceable author statement /// 2000114 // regulation of establishment of cell polarity // traceable author statement /// 2000145 // regulation of cell motility // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031616 // spindle pole centrosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005198 // structural molecule activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:11319890-11484711 (-) // 92.39 // p25.1"]
["11739144_a_at",0.22343063,0.16497898,0.19968128,-0.29650307,-0.24319363,-0.16497898,0.0014867174,0.000499228,1.348095,0.4309222,1.348095,"up","SKP2",6502,"0000080 // G1 phase of mitotic cell cycle // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000086 // G2/M transition of mitotic cell cycle // inferred from electronic annotation /// 0000209 // protein polyubiquitination // inferred from electronic annotation /// 0000278 // mitotic cell cycle // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008634 // negative regulation of survival gene product expression // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0033148 // positive regulation of intracellular estrogen receptor signaling pathway // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation","0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0019005 // SCF ubiquitin ligase complex // inferred from direct assay /// 0019005 // SCF ubiquitin ligase complex // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation","chr5:36152090-36182467 (+) // 98.94 // p13.2"]
["11746760_a_at",0.26798344,0.30652046,0.20407295,-0.43787193,-0.40450191,-0.20407295,0.0026156236,0.0015218379,1.5245054,0.6083412,1.5245054,"up","ERGIC1",57222,"0006810 // transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from direct assay /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr5:172332242-172345134 (+) // 28.11 // q35.1"]
["11732159_a_at",0.30657673,0.22611618,0.15414429,-0.15414429,-0.21775913,-0.20750809,0.0019427151,0.0009404013,1.3398606,0.4220829,1.3398606,"up","YIF1A",10897,"0006810 // transport // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","","chr11:66052050-66056626 (-) // 77.52 // q13.2"]
["11727402_at",0.26440907,0.21083832,0.2217102,-0.21083832,-0.243783,-0.26054668,0.0006160735,2.7811728e-5,1.3857899,0.47070852,1.3857899,"up","ERGIC2",51290,"0006810 // transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from direct assay /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation","","chr12:29490287-29534081 (-) // 85.62 // p11.22"]
["11744886_a_at",0.22358799,0.1856184,0.23880386,-0.1856184,-0.2462883,-0.24769974,0.00073960464,6.841401e-5,1.3589939,0.44253892,1.3589939,"up","SPAG9",9043,"0000187 // activation of MAPK activity // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // inferred from electronic annotation /// 0007283 // spermatogenesis // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0042147 // retrograde transport, endosome to Golgi // inferred from direct assay /// 0042692 // muscle cell differentiation // traceable author statement /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0051149 // positive regulation of muscle cell differentiation // traceable author statement /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0090074 // negative regulation of protein homodimerization activity // inferred from electronic annotation","0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016021 // integral to membrane // traceable author statement /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0008432 // JUN kinase binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0019894 // kinesin binding // inferred from electronic annotation /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation /// 0048273 // mitogen-activated protein kinase p38 binding // inferred from electronic annotation","chr17:49042435-49124329 (-) // 99.68 // q21.33"]
["11722160_a_at",0.4265957,0.34457588,0.30745125,-0.46063232,-0.48290825,-0.30745125,0.0012233602,0.00028852653,1.7130156,0.77653825,1.7130156,"up","GRB10",2887,"0007165 // signal transduction // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from direct assay /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // inferred from direct assay /// 0032868 // response to insulin stimulus // inferred from sequence or structural similarity /// 0042326 // negative regulation of phosphorylation // inferred from electronic annotation /// 0042327 // positive regulation of phosphorylation // inferred from sequence or structural similarity /// 0045719 // negative regulation of glycogen biosynthetic process // inferred from sequence or structural similarity /// 0046325 // negative regulation of glucose import // inferred from sequence or structural similarity /// 0046325 // negative regulation of glucose import // inferred from electronic annotation /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from electronic annotation /// 0048009 // insulin-like growth factor receptor signaling pathway // inferred from electronic annotation","0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement","0005070 // SH3/SH2 adaptor activity // inferred from electronic annotation /// 0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005158 // insulin receptor binding // inferred from sequence or structural similarity /// 0005158 // insulin receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation","chr7:50657764-50861158 (-) // 97.33 // p12.1"]
["11738423_a_at",0.3217721,0.24191427,0.2038064,-0.31536102,-0.2038064,-0.38020182,0.0018693322,0.0008653767,1.4698008,0.5556207,1.4698008,"up","HNF4A",3172,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006591 // ornithine metabolic process // inferred from mutant phenotype /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006637 // acyl-CoA metabolic process // inferred from electronic annotation /// 0006805 // xenobiotic metabolic process // inferred from mutant phenotype /// 0007164 // establishment of tissue polarity // inferred from electronic annotation /// 0007548 // sex differentiation // inferred from electronic annotation /// 0007596 // blood coagulation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from sequence or structural similarity /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010470 // regulation of gastrulation // inferred from electronic annotation /// 0019216 // regulation of lipid metabolic process // inferred from direct assay /// 0023019 // signal transduction involved in regulation of gene expression // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0030522 // intracellular receptor mediated signaling pathway // inferred from electronic annotation /// 0031018 // endocrine pancreas development // traceable author statement /// 0032534 // regulation of microvillus assembly // inferred from electronic annotation /// 0033159 // negative regulation of protein import into nucleus, translocation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042524 // negative regulation of tyrosine phosphorylation of Stat5 protein // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from sequence or structural similarity /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0045216 // cell-cell junction organization // inferred from electronic annotation /// 0045722 // positive regulation of gluconeogenesis // inferred from electronic annotation /// 0045723 // positive regulation of fatty acid biosynthetic process // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045930 // negative regulation of mitotic cell cycle // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0050732 // negative regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // inferred from sequence or structural similarity /// 0050796 // regulation of insulin secretion // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation /// 0055088 // lipid homeostasis // inferred from mutant phenotype /// 0055091 // phospholipid homeostasis // inferred from sequence or structural similarity /// 0055091 // phospholipid homeostasis // inferred from electronic annotation /// 0060395 // SMAD protein signal transduction // inferred from electronic annotation /// 0060398 // regulation of growth hormone receptor signaling pathway // non-traceable author statement /// 0070328 // triglyceride homeostasis // inferred from sequence or structural similarity /// 0070328 // triglyceride homeostasis // inferred from electronic annotation /// 2000189 // positive regulation of cholesterol homeostasis // inferred from sequence or structural similarity /// 2000189 // positive regulation of cholesterol homeostasis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000062 // fatty-acyl-CoA binding // inferred from electronic annotation /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from sequence or structural similarity /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from direct assay /// 0005504 // fatty acid binding // inferred from direct assay /// 0005504 // fatty acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016290 // palmitoyl-CoA hydrolase activity // inferred from electronic annotation /// 0033613 // activating transcription factor binding // inferred from sequence or structural similarity /// 0033613 // activating transcription factor binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070491 // repressing transcription factor binding // inferred from electronic annotation","chr20:43029923-43053276 (+) // 75.02 // q13.12"]
["11727897_a_at",0.27162838,0.22116756,0.19648743,-0.19648743,-0.3237524,-0.4024706,0.0021199163,0.0010983213,1.4512854,0.5373312,1.4512854,"up","NAA38",51691,"0000398 // nuclear mRNA splicing, via spliceosome // non-traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017070 // U6 snRNA binding // non-traceable author statement","chr7:117824085-117833660 (+) // 83.17 // q31.31"]
["11747825_a_at",0.24491072,0.206563,0.21240568,-0.3398447,-0.206563,-0.24695349,0.0012306612,0.0002967754,1.4003106,0.48574686,1.4003106,"up","NPHP3","100532724 /// 27031 /// 84129","0006629 // lipid metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0033539 // fatty acid beta-oxidation using acyl-CoA dehydrogenase // inferred from direct assay /// 0045494 // photoreceptor cell maintenance // inferred from mutant phenotype /// 0048496 // maintenance of organ identity // inferred from mutant phenotype /// 0048496 // maintenance of organ identity // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060271 // cilium morphogenesis // inferred from sequence or structural similarity /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from direct assay /// 2000095 // regulation of Wnt receptor signaling pathway, planar cell polarity pathway // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005777 // peroxisome // inferred from sequence or structural similarity /// 0005777 // peroxisome // inferred from electronic annotation /// 0005871 // kinesin complex // inferred from electronic annotation /// 0005929 // cilium // inferred from direct assay /// 0005929 // cilium // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0072372 // primary cilium // inferred from direct assay","0003777 // microtubule motor activity // inferred from electronic annotation /// 0003995 // acyl-CoA dehydrogenase activity // inferred from electronic annotation /// 0004466 // long-chain-acyl-CoA dehydrogenase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016627 // oxidoreductase activity, acting on the CH-CH group of donors // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017099 // very-long-chain-acyl-CoA dehydrogenase activity // inferred from direct assay /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation /// 0070991 // medium-chain-acyl-CoA dehydrogenase activity // inferred from direct assay","chr3:132294614-132345921 (-) // 89.18 // q22.1"]
["11725920_a_at",0.29887486,0.17526102,0.16121626,-0.16121578,-0.19944143,-0.20611048,0.0019481388,0.00094973866,1.3201543,0.40070662,1.3201543,"up","HEXIM2",124790,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045736 // negative regulation of cyclin-dependent protein kinase activity // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation","0004861 // cyclin-dependent protein kinase inhibitor activity // inferred from direct assay /// 0004861 // cyclin-dependent protein kinase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017069 // snRNA binding // inferred from direct assay /// 0017069 // snRNA binding // inferred from electronic annotation","chr17:43238066-43247399 (+) // 95.09 // q21.31"]
["11718065_a_at",0.19586372,0.17031002,0.21910858,-0.17031002,-0.33365345,-0.35478592,0.0023623689,0.0013073402,1.3960435,0.4813439,1.3960435,"up","PVRL2",5819,"0001675 // acrosome assembly // inferred from electronic annotation /// 0002860 // positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target // inferred from mutant phenotype /// 0002891 // positive regulation of immunoglobulin mediated immune response // inferred from mutant phenotype /// 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from direct assay /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007286 // spermatid development // inferred from sequence or structural similarity /// 0007286 // spermatid development // inferred from electronic annotation /// 0007289 // spermatid nucleus differentiation // inferred from electronic annotation /// 0009566 // fertilization // inferred from electronic annotation /// 0019064 // viral envelope fusion with host membrane // inferred from direct assay /// 0030382 // sperm mitochondrion organization // inferred from electronic annotation /// 0032990 // cell part morphogenesis // inferred from electronic annotation /// 0033005 // positive regulation of mast cell activation // inferred from mutant phenotype /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0042271 // susceptibility to natural killer cell mediated cytotoxicity // inferred from mutant phenotype /// 0043064 // flagellum organization // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045216 // cell-cell junction organization // traceable author statement /// 0045954 // positive regulation of natural killer cell mediated cytotoxicity // inferred from mutant phenotype /// 0046814 // virion attachment, binding of host cell surface coreceptor // inferred from direct assay /// 0050776 // regulation of immune response // traceable author statement /// 0051654 // establishment of mitochondrion localization // inferred from electronic annotation /// 0051856 // adhesion to symbiont // inferred from direct assay /// 0060370 // susceptibility to T cell mediated cytotoxicity // inferred from direct assay","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005915 // zonula adherens // inferred from sequence or structural similarity /// 0005915 // zonula adherens // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015026 // coreceptor activity // traceable author statement /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0050839 // cell adhesion molecule binding // inferred from physical interaction /// 0050839 // cell adhesion molecule binding // inferred from electronic annotation","chr19:45349392-45392480 (+) // 96.5 // q13.32"]
["11741477_a_at",0.25511312,0.27160597,0.368248,-0.25511312,-0.2700429,-0.40429115,0.0014867174,0.00050369714,1.5242907,0.6081381,1.5242907,"up","NPHP1",4867,"0007165 // signal transduction // non-traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007588 // excretion // traceable author statement /// 0007632 // visual behavior // non-traceable author statement /// 0016337 // cell-cell adhesion // non-traceable author statement /// 0030030 // cell projection organization // inferred from sequence or structural similarity /// 0030030 // cell projection organization // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // non-traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0048515 // spermatid differentiation // inferred from sequence or structural similarity /// 0060041 // retina development in camera-type eye // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0005912 // adherens junction // inferred from electronic annotation /// 0005923 // tight junction // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0030054 // cell junction // inferred from electronic annotation /// 0031514 // motile cilium // inferred from direct assay /// 0032391 // photoreceptor connecting cilium // inferred from sequence or structural similarity /// 0035085 // cilium axoneme // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005198 // structural molecule activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr2:110880926-110962639 (-) // 89.31 // q13"]
["11739492_a_at",0.14399004,0.10504246,0.11697483,-0.30134916,-0.3878131,-0.10504246,0.011605237,0.010185819,1.3074332,0.38673735,1.3074332,"up","MGAT4A",11320,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006491 // N-glycan processing // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0000139 // Golgi membrane // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008454 // alpha-1,3-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity // inferred from electronic annotation /// 0008454 // alpha-1,3-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016758 // transferase activity, transferring hexosyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:99235568-99343031 (-) // 81.98 // q11.2"]
["11746441_a_at",0.3167138,0.2757964,0.37928677,-0.33750677,-0.27579594,-0.3832593,0.0008942897,0.00011058827,1.5758384,0.65611964,1.5758384,"up","TGFBR1",7046,"0000186 // activation of MAPKK activity // inferred from direct assay /// 0001501 // skeletal system development // inferred from sequence or structural similarity /// 0001501 // skeletal system development // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from sequence or structural similarity /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001822 // kidney development // inferred from sequence or structural similarity /// 0001822 // kidney development // inferred from electronic annotation /// 0001824 // blastocyst development // inferred from electronic annotation /// 0001837 // epithelial to mesenchymal transition // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0007165 // signal transduction // inferred from direct assay /// 0007178 // transmembrane receptor protein serine/threonine kinase signaling pathway // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred by curator /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from mutant phenotype /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0007507 // heart development // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from electronic annotation /// 0007566 // embryo implantation // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008354 // germ cell migration // inferred from sequence or structural similarity /// 0008354 // germ cell migration // inferred from electronic annotation /// 0009636 // response to toxin // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from sequence or structural similarity /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0018107 // peptidyl-threonine phosphorylation // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030199 // collagen fibril organization // inferred from sequence or structural similarity /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from direct assay /// 0030324 // lung development // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0031396 // regulation of protein ubiquitination // inferred from direct assay /// 0032331 // negative regulation of chondrocyte differentiation // inferred from sequence or structural similarity /// 0034695 // response to prostaglandin E stimulus // inferred from electronic annotation /// 0040008 // regulation of growth // inferred from electronic annotation /// 0042060 // wound healing // traceable author statement /// 0042981 // regulation of apoptotic process // inferred from direct assay /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043062 // extracellular structure organization // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043393 // regulation of protein binding // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0045602 // negative regulation of endothelial cell differentiation // inferred from electronic annotation /// 0045885 // positive regulation of survival gene product expression // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048538 // thymus development // inferred from sequence or structural similarity /// 0048538 // thymus development // inferred from electronic annotation /// 0048565 // digestive tract development // inferred from electronic annotation /// 0048663 // neuron fate commitment // inferred from sequence or structural similarity /// 0048663 // neuron fate commitment // inferred from electronic annotation /// 0048701 // embryonic cranial skeleton morphogenesis // inferred from sequence or structural similarity /// 0048701 // embryonic cranial skeleton morphogenesis // inferred from electronic annotation /// 0048705 // skeletal system morphogenesis // inferred from sequence or structural similarity /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0048762 // mesenchymal cell differentiation // traceable author statement /// 0048844 // artery morphogenesis // inferred from sequence or structural similarity /// 0048844 // artery morphogenesis // inferred from electronic annotation /// 0048870 // cell motility // inferred from mutant phenotype /// 0051272 // positive regulation of cellular component movement // inferred from mutant phenotype /// 0051491 // positive regulation of filopodium assembly // inferred from electronic annotation /// 0051602 // response to electrical stimulus // inferred from electronic annotation /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from direct assay /// 0060017 // parathyroid gland development // inferred from sequence or structural similarity /// 0060017 // parathyroid gland development // inferred from electronic annotation /// 0060021 // palate development // inferred from sequence or structural similarity /// 0060021 // palate development // inferred from electronic annotation /// 0060037 // pharyngeal system development // inferred from sequence or structural similarity /// 0060037 // pharyngeal system development // inferred from electronic annotation /// 0060389 // pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0060391 // positive regulation of SMAD protein import into nucleus // inferred from direct assay /// 0070723 // response to cholesterol // inferred from direct assay /// 0070723 // response to cholesterol // inferred from electronic annotation /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from direct assay","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from direct assay /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0043235 // receptor complex // inferred from direct assay /// 0044459 // plasma membrane part // inferred from direct assay /// 0070022 // transforming growth factor beta receptor homodimeric complex // inferred by curator","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004675 // transmembrane receptor protein serine/threonine kinase activity // inferred from direct assay /// 0004675 // transmembrane receptor protein serine/threonine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005024 // transforming growth factor beta-activated receptor activity // inferred by curator /// 0005024 // transforming growth factor beta-activated receptor activity // inferred from direct assay /// 0005024 // transforming growth factor beta-activated receptor activity // inferred from mutant phenotype /// 0005024 // transforming growth factor beta-activated receptor activity // inferred from electronic annotation /// 0005025 // transforming growth factor beta receptor activity, type I // inferred from direct assay /// 0005025 // transforming growth factor beta receptor activity, type I // inferred from electronic annotation /// 0005114 // type II transforming growth factor beta receptor binding // inferred from direct assay /// 0005114 // type II transforming growth factor beta receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from electronic annotation /// 0046332 // SMAD binding // inferred from direct assay /// 0046332 // SMAD binding // inferred from physical interaction /// 0046332 // SMAD binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0050431 // transforming growth factor beta binding // inferred from direct assay /// 0050431 // transforming growth factor beta binding // inferred from mutant phenotype /// 0050431 // transforming growth factor beta binding // inferred from physical interaction /// 0050431 // transforming growth factor beta binding // inferred from electronic annotation /// 0070411 // I-SMAD binding // inferred from physical interaction","chr9:101891135-101911623 (+) // 91.14 // q22.33"]
["11750794_x_at",0.244483,0.15170622,0.19502449,-0.29101562,-0.1517067,-0.250453,0.001961328,0.00096714933,1.3454882,0.42812967,1.3454882,"up","TINAGL1",64129,"0006508 // proteolysis // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0016197 // endosomal transport // traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay","0005044 // scavenger receptor activity // inferred from electronic annotation /// 0005201 // extracellular matrix structural constituent // non-traceable author statement /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0030247 // polysaccharide binding // inferred from electronic annotation /// 0043236 // laminin binding // inferred from electronic annotation","chr1:32042115-32053288 (+) // 81.72 // p35.2"]
["11736549_a_at",0.3000555,0.29885292,0.22916126,-0.22916174,-0.3902912,-0.48174,0.0021825964,0.0011495759,1.5616678,0.64308757,1.5616678,"up","RAB7L1",8934,"0006184 // GTP catabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation","chr1:205737114-205744610 (-) // 71.91 // q32.1"]
["11726445_at",0.83298016,0.573452,0.6292,-0.573452,-0.7544708,-0.71114683,0.0009735221,0.00014437553,2.5637114,1.3582339,2.5637114,"up","KCNK3",3777,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // traceable author statement /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007420 // brain development // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0051481 // reduction of cytosolic calcium ion concentration // inferred from electronic annotation /// 0071294 // cellular response to zinc ion // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from electronic annotation /// 0071805 // potassium ion transmembrane transport // traceable author statement /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation /// 0090102 // cochlea development // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005252 // open rectifier potassium channel activity // inferred from electronic annotation /// 0005267 // potassium channel activity // traceable author statement /// 0005267 // potassium channel activity // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr2:26915585-26954064 (+) // 83.34 // p23.3"]
["11736985_a_at",0.5306382,0.38649654,0.21148777,-0.24682045,-0.21148777,-0.3095889,0.004084416,0.0028214485,1.5498979,0.6321732,1.5498979,"up","NUBPL",80224,"0032981 // mitochondrial respiratory chain complex I assembly // inferred from mutant phenotype /// 0070584 // mitochondrion morphogenesis // inferred from mutant phenotype","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from direct assay","chr14:32030590-32330368 (+) // 60.45 // q12"]
["11721988_at",0.18958092,0.12075758,0.14502192,-0.31635284,-0.12075806,-0.26906013,0.0047216183,0.0034059908,1.307832,0.38717717,1.307832,"up","KIAA1407",57577,"","","","chr3:113682983-113775460 (-) // 99.28 // q13.31"]
["11743609_a_at",0.16200161,0.20109367,0.17636967,-0.17061329,-0.16200161,-0.26887465,0.0014512807,0.00046064018,1.3016288,0.38031816,1.3016288,"up","FAM3C",10447,"0007275 // multicellular organismal development // inferred from electronic annotation","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0005125 // cytokine activity // non-traceable author statement","chr7:120988631-121036512 (-) // 97.53 // q31.31"]
["11729421_x_at",0.4574709,0.16646719,0.25378752,-0.2360034,-0.16646767,-0.24462032,0.006111591,0.004782412,1.4223459,0.50827235,1.4223459,"up","TTC26",79989,"","","","chr7:138818489-138874550 (+) // 99.86 // q34"]
["11757658_a_at",0.1611824,0.16579819,0.120075226,-0.120075226,-0.33735085,-0.43023014,0.01021737,0.00876529,1.3612236,0.44490403,1.3612236,"up","LZIC",84328,"0007417 // central nervous system development // not recorded /// 0010212 // response to ionizing radiation // inferred from electronic annotation","","0008013 // beta-catenin binding // inferred from electronic annotation","chr1:9982172-10002807 (-) // 96.42 // p36.22"]
["11756395_s_at",0.40396214,0.29753017,0.26569843,-0.26569843,-0.3619833,-0.35993958,0.0011555209,0.00024228012,1.5709138,0.651604,1.5709138,"up","AP1S2",8905,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral reproduction // traceable author statement /// 0016044 // cellular membrane organization // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0050690 // regulation of defense response to virus by virus // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0005765 // lysosomal membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation /// 0030119 // AP-type membrane coat adaptor complex // traceable author statement /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0008565 // protein transporter activity // inferred from electronic annotation","chrX:15844192-15845143 (-) // 95.57 // p22.2"]
["11735012_a_at",0.30742025,0.3646927,0.23362112,-0.2336216,-0.26058483,-0.34798908,0.0013056259,0.0003424316,1.4975904,0.58264315,1.4975904,"up","DYNLL2",140735,"0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007017 // microtubule-based process // inferred from electronic annotation /// 0008039 // synaptic target recognition // inferred from electronic annotation /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005875 // microtubule associated complex // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016459 // myosin complex // inferred from sequence or structural similarity /// 0016459 // myosin complex // inferred from electronic annotation /// 0030286 // dynein complex // inferred from electronic annotation","0003774 // motor activity // inferred from electronic annotation /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation","chr17:56160775-56167639 (+) // 96.06 // q22"]
["11721735_at",0.23531532,0.1853075,0.16666317,-0.16666317,-0.23871231,-0.26017284,0.0012233602,0.0002803407,1.3357142,0.41761142,1.3357142,"up","DHTKD1",55526,"0006096 // glycolysis // inferred from electronic annotation /// 0006099 // tricarboxylic acid cycle // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation","0004591 // oxoglutarate dehydrogenase (succinyl-transferring) activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016624 // oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor // inferred from electronic annotation /// 0030976 // thiamine pyrophosphate binding // inferred from electronic annotation","chr10:12110948-12166110 (+) // 82.79 // p14"]
["11725095_at",0.26390934,0.30583763,0.44278717,-0.26390934,-0.38451147,-0.32496786,0.0014867174,0.00050090445,1.5822464,0.6619743,1.5822464,"up","TTC33",23548,"","","","chr5:40711699-40756064 (-) // 80.91 // p13.1"]
["11718955_a_at",0.30987167,0.17696142,0.17102051,-0.20842934,-0.27222633,-0.17102003,0.0023239863,0.001282043,1.3533263,0.4365098,1.3533263,"up","FBLIM1",54751,"0007155 // cell adhesion // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from mutant phenotype /// 0033623 // regulation of integrin activation // inferred from mutant phenotype /// 0034329 // cell junction assembly // traceable author statement","0001725 // stress fiber // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0008270 // zinc ion binding // inferred from electronic annotation /// 0031005 // filamin binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:16084913-16113224 (+) // 72.65 // p36.21"]
["11725887_at",0.3597169,0.30009937,0.24004507,-0.24004555,-0.2572837,-0.46014166,0.0024813574,0.0014084536,1.5359281,0.61911076,1.5359281,"up","FAM167B",84734,"","","","chr1:32712817-32714461 (+) // 95.6 // p35.1"]
["11750969_a_at",0.27849007,0.26169014,0.3134575,-0.35606384,-0.33506966,-0.26169014,0.00069462875,4.9444014e-5,1.517981,0.6021538,1.517981,"up","SQLE",6713,"0006695 // cholesterol biosynthetic process // traceable author statement /// 0006725 // cellular aromatic compound metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // non-traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // non-traceable author statement /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004497 // monooxygenase activity // inferred from electronic annotation /// 0004506 // squalene monooxygenase activity // non-traceable author statement /// 0004506 // squalene monooxygenase activity // traceable author statement /// 0004506 // squalene monooxygenase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation","chr8:126011600-126034435 (+) // 99.94 // q24.13"]
["11716309_a_at",0.36838675,0.2265625,0.22521782,-0.22521782,-0.27927446,-0.2533002,0.0014512807,0.00046172968,1.4399178,0.5259865,1.4399178,"up","CYBRD1",79901,"0006879 // cellular iron ion homeostasis // traceable author statement /// 0010039 // response to iron ion // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031526 // brush border membrane // inferred from electronic annotation","0000293 // ferric-chelate reductase activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016722 // oxidoreductase activity, oxidizing metal ions // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:172378742-172414639 (+) // 89.4 // q31.1"]
["11736244_s_at",0.2233429,0.18120003,0.22713947,-0.18120003,-0.32292938,-0.28434944,0.0014407983,0.00045358465,1.3883651,0.4733871,1.3883651,"up","HIST1H2AC",8334,"0006334 // nucleosome assembly // non-traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation","0000786 // nucleosome // non-traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr6:26124396-26138605 (+) // 90.6 // p22.2"]
["11722348_a_at",0.289196,0.46200275,0.37817287,-0.289196,-0.3146515,-0.43990803,0.0014306394,0.00044623017,1.6521856,0.7243757,1.6521856,"up","REPS2",9185,"0006461 // protein complex assembly // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chrX:16964813-17171395 (+) // 91.22 // p22.2"]
["11744304_a_at",0.3152914,0.22853565,0.12606668,-0.16677856,-0.12606621,-0.17777538,0.0038521043,0.0026095435,1.3014964,0.3801713,1.3014964,"up","MFSD3",113655,"0006810 // transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr8:145734450-145736589 (+) // 96.57 // q24.3"]
["11734234_at",0.44208193,0.37513208,0.3753748,-0.75786924,-0.37513208,-0.555542,0.00205222,0.0010429025,1.9458188,0.9603774,1.9458188,"up","HIST1H2AG","8329 /// 8330 /// 8332 /// 8336 /// 85235 /// 8969","0006334 // nucleosome assembly // inferred from electronic annotation /// 0006334 // nucleosome assembly // non-traceable author statement","0000786 // nucleosome // inferred from electronic annotation /// 0000786 // nucleosome // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0019899 // enzyme binding // inferred from physical interaction","chr6:27100816-27103070 (+) // 70.91 // p22.1"]
["11747328_a_at",0.44300508,0.38958836,0.23922682,-0.23922634,-0.26192856,-0.24866867,0.0015855012,0.00058517425,1.5233153,0.6072146,1.5233153,"up","FHL1",2273,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007517 // muscle organ development // non-traceable author statement /// 0009887 // organ morphogenesis // non-traceable author statement /// 0010972 // negative regulation of G2/M transition of mitotic cell cycle // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 2000134 // negative regulation of G1/S transition of mitotic cell cycle // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:135279182-135293508 (+) // 95.99 // q26.3"]
["11736340_a_at",0.45236874,0.2931013,0.28868103,-0.28868103,-0.32658052,-0.36853647,0.0012808557,0.00032818934,1.593998,0.67264974,1.593998,"up","PCSK1",5122,"0006112 // energy reserve metabolic process // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0008152 // metabolic process // traceable author statement /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0010035 // response to inorganic substance // inferred from electronic annotation /// 0010157 // response to chlorate // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016485 // protein processing // inferred from electronic annotation /// 0016486 // peptide hormone processing // traceable author statement /// 0016486 // peptide hormone processing // inferred from electronic annotation /// 0016540 // protein autoprocessing // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from electronic annotation /// 0031016 // pancreas development // inferred from electronic annotation /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0043043 // peptide biosynthetic process // inferred from sequence or structural similarity /// 0043043 // peptide biosynthetic process // inferred from electronic annotation /// 0043278 // response to morphine // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0048678 // response to axon injury // inferred from electronic annotation /// 0050714 // positive regulation of protein secretion // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // traceable author statement /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from electronic annotation /// 0070542 // response to fatty acid // inferred from electronic annotation /// 0070555 // response to interleukin-1 // inferred from electronic annotation","0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005791 // rough endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // not recorded /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from electronic annotation /// 0030141 // secretory granule // traceable author statement /// 0030141 // secretory granule // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043679 // axon terminus // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0004175 // endopeptidase activity // traceable author statement /// 0004175 // endopeptidase activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // not recorded /// 0004252 // serine-type endopeptidase activity // inferred from sequence or structural similarity /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0043559 // insulin binding // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from electronic annotation","chr5:95726071-95768985 (-) // 96.16 // q15"]
["11720158_a_at",0.20104933,0.14404726,0.15498495,-0.472579,-0.14404774,-0.45611238,0.009885796,0.008391513,1.4382092,0.5242736,1.4382092,"up","WDR19",57728,"0030030 // cell projection organization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0031513 // nonmotile primary cilium // inferred from sequence or structural similarity /// 0031513 // nonmotile primary cilium // inferred from electronic annotation /// 0031514 // motile cilium // inferred from sequence or structural similarity /// 0031514 // motile cilium // inferred from electronic annotation /// 0032391 // photoreceptor connecting cilium // inferred from sequence or structural similarity /// 0032391 // photoreceptor connecting cilium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","","chr4:39184023-39287429 (+) // 99.6 // p14"]
["11750722_a_at",0.19114113,0.15711594,0.12891197,-0.12891197,-0.37292814,-0.2348566,0.0065242443,0.0051553696,1.3237419,0.40462193,1.3237419,"up","GPHN",10243,"0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006777 // Mo-molybdopterin cofactor biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0032324 // molybdopterin cofactor biosynthetic process // traceable author statement /// 0032324 // molybdopterin cofactor biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016740 // transferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:66975230-67647914 (+) // 99.92 // q23.3"]
["11746229_a_at",0.19133854,0.28710365,0.2912197,-0.25745773,-0.21556664,-0.19133854,0.0011370784,0.00022788574,1.3928195,0.47800827,1.3928195,"up","RPL31",6160,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // traceable author statement","chr2:101618750-101637620 (+) // 88.23 // q11.2"]
["11763516_a_at",0.24296188,0.21563292,0.1523552,-0.1523552,-0.3007064,-0.38975286,0.004112417,0.0028478752,1.3991864,0.48458815,1.3991864,"up","CPT1C",126129,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006635 // fatty acid beta-oxidation // inferred from electronic annotation /// 0009437 // carnitine metabolic process // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004095 // carnitine O-palmitoyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation","chr19:50194368-50216300 (+) // 95.52 // q13.33"]
["11740366_a_at",0.25679493,0.22160435,0.27897358,-0.22160435,-0.32697296,-0.26975632,0.0008942897,0.000111482994,1.4391686,0.52523553,1.4391686,"up","SHMT1",6470,"0006544 // glycine metabolic process // inferred from electronic annotation /// 0006545 // glycine biosynthetic process // inferred from electronic annotation /// 0006563 // L-serine metabolic process // inferred from electronic annotation /// 0006565 // L-serine catabolic process // inferred from direct assay /// 0006730 // one-carbon metabolic process // inferred from electronic annotation /// 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0009113 // purine base biosynthetic process // inferred from direct assay /// 0019264 // glycine biosynthetic process from serine // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0035999 // tetrahydrofolate interconversion // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045329 // carnitine biosynthetic process // traceable author statement /// 0046655 // folic acid metabolic process // inferred from direct assay /// 0046655 // folic acid metabolic process // traceable author statement /// 0051262 // protein tetramerization // inferred from direct assay /// 0051289 // protein homotetramerization // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004372 // glycine hydroxymethyltransferase activity // inferred from direct assay /// 0004372 // glycine hydroxymethyltransferase activity // traceable author statement /// 0004372 // glycine hydroxymethyltransferase activity // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008732 // L-allo-threonine aldolase activity // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from direct assay /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay","chr17:18231194-18266856 (-) // 98.8 // p11.2"]
["11734796_s_at",0.47293377,0.18805265,0.14682198,-0.21157932,-0.14682198,-0.23240042,0.012968428,0.011600098,1.3814692,0.4662034,1.3814692,"up","HIST1H2BC","8339 /// 8343 /// 8344 /// 8346 /// 8347","0006334 // nucleosome assembly // non-traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation","0000786 // nucleosome // non-traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr6:26215416-26216920 (-) // 47.43 // p22.2"]
["11734796_s_at",0.47293377,0.18805265,0.14682198,-0.21157932,-0.14682198,-0.23240042,0.012968428,0.011600098,1.3814692,0.4662034,1.3814692,"up","HIST1H2BE","8339 /// 8343 /// 8344 /// 8346 /// 8347","0006334 // nucleosome assembly // non-traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation","0000786 // nucleosome // non-traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr6:26215416-26216920 (-) // 47.43 // p22.2"]
["11734796_s_at",0.47293377,0.18805265,0.14682198,-0.21157932,-0.14682198,-0.23240042,0.012968428,0.011600098,1.3814692,0.4662034,1.3814692,"up","HIST1H2BF","8339 /// 8343 /// 8344 /// 8346 /// 8347","0006334 // nucleosome assembly // non-traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation","0000786 // nucleosome // non-traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr6:26215416-26216920 (-) // 47.43 // p22.2"]
["11734796_s_at",0.47293377,0.18805265,0.14682198,-0.21157932,-0.14682198,-0.23240042,0.012968428,0.011600098,1.3814692,0.4662034,1.3814692,"up","HIST1H2BG","8339 /// 8343 /// 8344 /// 8346 /// 8347","0006334 // nucleosome assembly // non-traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation","0000786 // nucleosome // non-traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr6:26215416-26216920 (-) // 47.43 // p22.2"]
["11717746_a_at",0.1690073,0.21212769,0.19081783,-0.23990917,-0.18298721,-0.1690073,0.0008691947,0.00010069482,1.3085346,0.38795215,1.3085346,"up","MARCH6",10299,"0016567 // protein ubiquitination // inferred from mutant phenotype /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // inferred from mutant phenotype /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0031624 // ubiquitin conjugating enzyme binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:10353825-10435787 (+) // 95.16 // p15.2"]
["11734234_at",0.44208193,0.37513208,0.3753748,-0.75786924,-0.37513208,-0.555542,0.00205222,0.0010429025,1.9458188,0.9603774,1.9458188,"up","HIST1H2AI","8329 /// 8330 /// 8332 /// 8336 /// 85235 /// 8969","0006334 // nucleosome assembly // inferred from electronic annotation /// 0006334 // nucleosome assembly // non-traceable author statement","0000786 // nucleosome // inferred from electronic annotation /// 0000786 // nucleosome // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0019899 // enzyme binding // inferred from physical interaction","chr6:27100816-27103070 (+) // 70.91 // p22.1"]
["11734234_at",0.44208193,0.37513208,0.3753748,-0.75786924,-0.37513208,-0.555542,0.00205222,0.0010429025,1.9458188,0.9603774,1.9458188,"up","HIST1H2AH","8329 /// 8330 /// 8332 /// 8336 /// 85235 /// 8969","0006334 // nucleosome assembly // inferred from electronic annotation /// 0006334 // nucleosome assembly // non-traceable author statement","0000786 // nucleosome // inferred from electronic annotation /// 0000786 // nucleosome // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0019899 // enzyme binding // inferred from physical interaction","chr6:27100816-27103070 (+) // 70.91 // p22.1"]
["11734234_at",0.44208193,0.37513208,0.3753748,-0.75786924,-0.37513208,-0.555542,0.00205222,0.0010429025,1.9458188,0.9603774,1.9458188,"up","HIST1H2AK","8329 /// 8330 /// 8332 /// 8336 /// 85235 /// 8969","0006334 // nucleosome assembly // inferred from electronic annotation /// 0006334 // nucleosome assembly // non-traceable author statement","0000786 // nucleosome // inferred from electronic annotation /// 0000786 // nucleosome // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0019899 // enzyme binding // inferred from physical interaction","chr6:27100816-27103070 (+) // 70.91 // p22.1"]
["11735021_a_at",0.17483234,0.15608788,0.20655155,-0.24907112,-0.1560874,-0.23221445,0.0011947562,0.00026138508,1.311861,0.3916149,1.311861,"up","ZNF462",58499,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0043392 // negative regulation of DNA binding // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:109625377-109773763 (+) // 96.74 // q31.2"]
["11736908_at",0.18136215,0.20143747,0.19888306,-0.18136215,-0.18744087,-0.2271452,0.0005467525,1.5117174e-5,1.3127058,0.3925436,1.3127058,"up","ZBTB3",79842,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:62518381-62521660 (-) // 69.15 // q12.3"]
["11734234_at",0.44208193,0.37513208,0.3753748,-0.75786924,-0.37513208,-0.555542,0.00205222,0.0010429025,1.9458188,0.9603774,1.9458188,"up","HIST1H2AM","8329 /// 8330 /// 8332 /// 8336 /// 85235 /// 8969","0006334 // nucleosome assembly // inferred from electronic annotation /// 0006334 // nucleosome assembly // non-traceable author statement","0000786 // nucleosome // inferred from electronic annotation /// 0000786 // nucleosome // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0019899 // enzyme binding // inferred from physical interaction","chr6:27100816-27103070 (+) // 70.91 // p22.1"]
["11734234_at",0.44208193,0.37513208,0.3753748,-0.75786924,-0.37513208,-0.555542,0.00205222,0.0010429025,1.9458188,0.9603774,1.9458188,"up","HIST1H2AL","8329 /// 8330 /// 8332 /// 8336 /// 85235 /// 8969","0006334 // nucleosome assembly // inferred from electronic annotation /// 0006334 // nucleosome assembly // non-traceable author statement","0000786 // nucleosome // inferred from electronic annotation /// 0000786 // nucleosome // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0019899 // enzyme binding // inferred from physical interaction","chr6:27100816-27103070 (+) // 70.91 // p22.1"]
["11758563_at",0.4498062,0.4444208,0.3062234,-0.30622292,-0.416533,-0.4025979,0.0010771177,0.00018612259,1.711508,0.7752681,1.711508,"up","METTL21A","100506290 /// 100653153 /// 151194","0032259 // methylation // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr2:208477464-208477880 (-) // 98.81 // q33.3"]
["11727375_a_at",0.17053127,0.2876835,0.2655449,-0.20503712,-0.25424385,-0.17053127,0.0014677041,0.00048228173,1.3671681,0.45119062,1.3671681,"up","HMGCR",3156,"0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // traceable author statement /// 0006695 // cholesterol biosynthetic process // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0008299 // isoprenoid biosynthetic process // inferred from electronic annotation /// 0008542 // visual learning // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0015936 // coenzyme A metabolic process // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // inferred from electronic annotation /// 0043407 // negative regulation of MAP kinase activity // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0048643 // positive regulation of skeletal muscle tissue development // inferred from electronic annotation /// 0051262 // protein tetramerization // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004420 // hydroxymethylglutaryl-CoA reductase (NADPH) activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0042282 // hydroxymethylglutaryl-CoA reductase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0050661 // NADP binding // inferred from electronic annotation /// 0050662 // coenzyme binding // inferred from direct assay /// 0050662 // coenzyme binding // inferred from electronic annotation /// 0070402 // NADPH binding // inferred from direct assay","chr5:74632992-74657926 (+) // 98.56 // q13.3"]
["11736429_at",0.2327714,0.19270277,0.18646955,-0.18646955,-0.33838367,-0.56220484,0.008209111,0.0067702187,1.480756,0.56633395,1.480756,"up","STYX",6815,"0006470 // protein dephosphorylation // not recorded /// 0007283 // spermatogenesis // not recorded /// 0016311 // dephosphorylation // inferred from electronic annotation","0005737 // cytoplasm // not recorded","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // not recorded /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr14:53196877-53241703 (+) // 92.63 // q22.1"]
["11730474_at",0.15543938,0.16383839,0.21541071,-0.20709562,-0.1554389,-0.32242823,0.0026252405,0.0015308249,1.3255126,0.4065504,1.3255126,"up","PDE3B",5140,"0006198 // cAMP catabolic process // inferred from expression pattern /// 0006198 // cAMP catabolic process // inferred from electronic annotation /// 0007162 // negative regulation of cell adhesion // inferred from mutant phenotype /// 0007165 // signal transduction // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0016525 // negative regulation of angiogenesis // inferred from mutant phenotype /// 0031018 // endocrine pancreas development // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from sequence or structural similarity /// 0033629 // negative regulation of cell adhesion mediated by integrin // inferred by curator /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0043951 // negative regulation of cAMP-mediated signaling // inferred by curator /// 0046676 // negative regulation of insulin secretion // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // inferred from electronic annotation /// 0050995 // negative regulation of lipid catabolic process // inferred from mutant phenotype","0005626 // insoluble fraction // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005792 // microsome // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032045 // guanyl-nucleotide exchange factor complex // inferred from direct assay","0003824 // catalytic activity // inferred from electronic annotation /// 0004114 // 3',5'-cyclic-nucleotide phosphodiesterase activity // traceable author statement /// 0004114 // 3',5'-cyclic-nucleotide phosphodiesterase activity // inferred from electronic annotation /// 0004115 // 3',5'-cyclic-AMP phosphodiesterase activity // inferred from electronic annotation /// 0004119 // cGMP-inhibited cyclic-nucleotide phosphodiesterase activity // inferred from electronic annotation /// 0004119 // cGMP-inhibited cyclic-nucleotide phosphodiesterase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008081 // phosphoric diester hydrolase activity // inferred from electronic annotation /// 0008144 // drug binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030552 // cAMP binding // inferred from electronic annotation /// 0043422 // protein kinase B binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051219 // phosphoprotein binding // inferred from electronic annotation","chr11:14665231-14894368 (+) // 90.08 // p15.2"]
["11719018_at",0.23597908,0.23421383,0.2280178,-0.2280178,-0.27300072,-0.3807211,0.0012591777,0.00031471305,1.4405804,0.52665013,1.4405804,"up","CBFB",865,"0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement","0005634 // nucleus // inferred from electronic annotation","0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr16:67063049-67134961 (+) // 91.08 // q22.1"]
["11744747_a_at",0.311965,0.30704975,0.34390926,-0.32773685,-0.30704975,-0.4121313,0.0006672249,3.9830764e-5,1.5910149,0.6699473,1.5910149,"up","FGFR1OP2",26127,"0009611 // response to wounding // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","","chr12:27091429-27113802 (+) // 96.45 // p11.23"]
["11743451_s_at",0.37852573,0.15443802,0.34361506,-0.23341465,-0.15443802,-0.1965375,0.003911406,0.0026581388,1.4015174,0.48698968,1.4015174,"up","ELOVL6",79071,"0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0019367 // fatty acid elongation, saturated fatty acid // inferred from direct assay /// 0019367 // fatty acid elongation, saturated fatty acid // inferred from electronic annotation /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0030497 // fatty acid elongation // inferred from electronic annotation /// 0034625 // fatty acid elongation, monounsaturated fatty acid // inferred from electronic annotation /// 0035338 // long-chain fatty-acyl-CoA biosynthetic process // traceable author statement /// 0042759 // long-chain fatty acid biosynthetic process // inferred from direct assay /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0009922 // fatty acid elongase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation","chr4:110969546-111120036 (-) // 97.89 // q25"]
["11731076_a_at",0.7010422,0.50171137,0.65155077,-0.50171137,-0.60239315,-0.65526676,0.00084399927,8.7712055e-5,2.3046672,1.2045585,2.3046672,"up","LONRF1",91694,"0006508 // proteolysis // inferred from electronic annotation","","0004176 // ATP-dependent peptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:12579414-12612999 (-) // 90.82 // p23.1"]
["11742639_a_at",0.45687532,0.31822634,0.24846458,-0.3694625,-0.2952819,-0.24846458,0.0017967653,0.00079616584,1.5643808,0.64559174,1.5643808,"up","RDM1",201299,"0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015030 // Cajal body // inferred from electronic annotation /// 0016605 // PML body // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr17:34249481-34257780 (-) // 100.0 // q12"]
["11758185_s_at",0.27709198,0.22138786,0.2560873,-0.23213863,-0.23779106,-0.22138786,0.00047635857,9.0801705e-6,1.3966414,0.48196158,1.3966414,"up","TWF1",5756,"0030837 // negative regulation of actin filament polymerization // inferred from sequence or structural similarity /// 0042989 // sequestering of actin monomers // inferred from sequence or structural similarity /// 0043538 // regulation of actin phosphorylation // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from sequence or structural similarity /// 0015629 // actin cytoskeleton // inferred from sequence or structural similarity /// 0030016 // myofibril // inferred from sequence or structural similarity /// 0030175 // filopodium // inferred from sequence or structural similarity /// 0032587 // ruffle membrane // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity","0003779 // actin binding // inferred from electronic annotation /// 0003785 // actin monomer binding // inferred from sequence or structural similarity /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0005524 // ATP binding // inferred from direct assay /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from sequence or structural similarity","chr12:44189133-44200178 (-) // 96.32 // q12 /// chr17:27530186-27531563 (-) // 94.73 // q11.2"]
["11724956_a_at",0.288414,0.20172405,0.1710167,-0.23121405,-0.17101622,-0.21206808,0.0013953822,0.0004175339,1.342713,0.42515102,1.342713,"up","C14orf169",79697,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0034720 // histone H3-K4 demethylation // inferred from sequence or structural similarity /// 0045668 // negative regulation of osteoblast differentiation // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070544 // histone H3-K36 demethylation // inferred from sequence or structural similarity /// 0070544 // histone H3-K36 demethylation // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation","0005506 // iron ion binding // inferred from sequence or structural similarity /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from sequence or structural similarity /// 0032453 // histone demethylase activity (H3-K4 specific) // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051864 // histone demethylase activity (H3-K36 specific) // inferred from sequence or structural similarity /// 0051864 // histone demethylase activity (H3-K36 specific) // inferred from electronic annotation","chr14:73957530-73960098 (+) // 97.4 // q24.3"]
["11720646_at",0.23011398,0.43495464,0.3521452,-0.31713486,-0.23011446,-0.27628183,0.0016763486,0.0006851227,1.530053,0.61358166,1.530053,"up","SPTLC2",9517,"0006665 // sphingolipid metabolic process // traceable author statement /// 0006665 // sphingolipid metabolic process // inferred from electronic annotation /// 0006686 // sphingomyelin biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046511 // sphinganine biosynthetic process // inferred from electronic annotation /// 0046512 // sphingosine biosynthetic process // inferred from electronic annotation /// 0046513 // ceramide biosynthetic process // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0017059 // serine C-palmitoyltransferase complex // inferred from direct assay","0003824 // catalytic activity // inferred from electronic annotation /// 0004758 // serine C-palmitoyltransferase activity // inferred from direct assay /// 0004758 // serine C-palmitoyltransferase activity // inferred from electronic annotation /// 0004758 // serine C-palmitoyltransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation","chr14:77972340-78083116 (-) // 87.95 // q24.3"]
["11748505_a_at",0.1369772,0.12770271,0.13877296,-0.47074223,-0.30076408,-0.12770271,0.013221201,0.011854668,1.3511807,0.43422064,1.3511807,"up","NCALD",83988,"0007268 // synaptic transmission // traceable author statement /// 0016192 // vesicle-mediated transport // non-traceable author statement","0005622 // intracellular // inferred from direct assay /// 0005829 // cytosol // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0030130 // clathrin coat of trans-Golgi network vesicle // non-traceable author statement","0003779 // actin binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0015631 // tubulin binding // inferred from direct assay /// 0030276 // clathrin binding // inferred from direct assay","chr8:102700790-103136548 (-) // 93.19 // q22.3"]
["11756810_a_at",0.44806004,0.22579098,0.16906643,-0.16906643,-0.21296787,-0.19923115,0.0066572223,0.005283919,1.3896558,0.47472763,1.3896558,"up","MFAP2",4237,"0030220 // platelet formation // inferred from electronic annotation","0001527 // microfibril // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation","0001968 // fibronectin binding // inferred from electronic annotation /// 0070051 // fibrinogen binding // inferred from electronic annotation","chr1:17301000-17304812 (-) // 77.39 // p36.13"]
["11719240_at",0.15209961,0.23706245,0.23706245,-0.16212559,-0.24429321,-0.15209961,0.0016202792,0.00063036644,1.3148646,0.3949143,1.3148646,"up","PANX1",24145,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from direct assay /// 0006816 // calcium ion transport // inferred from mutant phenotype /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0007267 // cell-cell signaling // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0033198 // response to ATP // inferred from electronic annotation /// 0034214 // protein hexamerization // inferred from direct assay /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0050715 // positive regulation of cytokine secretion // inferred from electronic annotation /// 0050717 // positive regulation of interleukin-1 alpha secretion // inferred from electronic annotation /// 0050718 // positive regulation of interleukin-1 beta secretion // inferred from direct assay /// 0050718 // positive regulation of interleukin-1 beta secretion // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from mutant phenotype /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005921 // gap junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0032059 // bleb // inferred from direct assay","0005102 // receptor binding // inferred from physical interaction /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005243 // gap junction channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from mutant phenotype /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0022840 // leak channel activity // inferred from mutant phenotype /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0055077 // gap junction hemi-channel activity // inferred from direct assay","chr11:93862011-93915618 (+) // 99.1 // q21"]
["11745020_a_at",0.30648708,0.21368504,0.18748474,-0.2754326,-0.18748474,-0.20900917,0.0014867174,0.00050635205,1.3754094,0.4598611,1.3754094,"up","TNFRSF12A",51330,"0001525 // angiogenesis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006928 // cellular component movement // traceable author statement /// 0006931 // substrate-dependent cell migration, cell attachment to substrate // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045773 // positive regulation of axon extension // inferred from electronic annotation /// 2001238 // positive regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype","0001726 // ruffle // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr16:3070359-3072381 (+) // 96.01 // p13.3"]
["11749958_a_at",0.13398457,0.17266655,0.1856451,-0.28792,-0.25288296,-0.13398457,0.0024511016,0.0013733347,1.3095107,0.3890279,1.3095107,"up","DSCR3",10311,"0007034 // vacuolar transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0030904 // retromer complex // inferred from electronic annotation","","chr21:38597555-38639827 (-) // 99.83 // q22.13"]
["11751710_a_at",0.23124838,0.23304605,0.17515421,-0.19860935,-0.3906741,-0.17515421,0.0039794478,0.0027249448,1.3831543,0.46796212,1.3831543,"up","SLC48A1",55652,"0006810 // transport // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:48167052-48175139 (+) // 95.06 // q13.11"]
["11748913_a_at",0.41518116,0.31244183,0.31455898,-0.31244183,-0.4065323,-0.45508194,0.0010089864,0.0001638346,1.6687248,0.73874605,1.6687248,"up","B4GALT4",8702,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006643 // membrane lipid metabolic process // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0003945 // N-acetyllactosamine synthase activity // inferred from electronic annotation /// 0008378 // galactosyltransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:118935085-118959725 (-) // 99.28 // q13.32"]
["11729128_at",0.2884636,0.32606792,0.30073833,-0.31358528,-0.5876756,-0.2884636,0.0030474162,0.001897745,1.6263804,0.7016648,1.6263804,"up","CPA4",51200,"0006508 // proteolysis // non-traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0016573 // histone acetylation // non-traceable author statement","0005576 // extracellular region // inferred from electronic annotation","0004180 // carboxypeptidase activity // inferred from electronic annotation /// 0004181 // metallocarboxypeptidase activity // non-traceable author statement /// 0004181 // metallocarboxypeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:129932973-129964014 (+) // 85.97 // q32.2"]
["11741012_a_at",0.31637764,0.26650047,0.2238226,-0.2238226,-0.31675053,-0.3622036,0.0012443048,0.00030560244,1.4843444,0.5698258,1.4843444,"up","MSMO1",6307,"0006631 // fatty acid metabolic process // traceable author statement /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // traceable author statement /// 0008202 // steroid metabolic process // traceable author statement /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0000254 // C-4 methylsterol oxidase activity // inferred from electronic annotation /// 0000254 // C-4 methylsterol oxidase activity // traceable author statement /// 0005506 // iron ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation","chr4:166248774-166264224 (+) // 82.61 // q32.3"]
["11743923_at",0.194767,0.18173695,0.12644386,-0.12644386,-0.3278203,-0.42752075,0.008553791,0.007117108,1.3770468,0.46157756,1.3770468,"up","DPH3P1","100132911 /// 10732","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from expression pattern /// 0007283 // spermatogenesis // inferred from sequence or structural similarity /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from expression pattern /// 0042127 // regulation of cell proliferation // inferred from sequence or structural similarity /// 0045595 // regulation of cell differentiation // inferred from expression pattern /// 0045595 // regulation of cell differentiation // inferred from sequence or structural similarity","0001673 // male germ cell nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:61472365-61493115 (-) // 87.59 // q13.33"]
["11740430_x_at",0.17193747,0.21939373,0.13396072,-0.13396072,-0.26278448,-0.29655838,0.0029773635,0.0018368062,1.3251894,0.4061985,1.3251894,"up","FAM208A",23272,"","","","chr3:56654159-56698359 (-) // 89.86 // p14.3"]
["11725373_a_at",0.33565187,0.20727015,0.1956191,-0.19717455,-0.1956191,-0.2415762,0.0016301863,0.0006398275,1.3732907,0.45763698,1.3732907,"up","TRADD",8717,"0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0033209 // tumor necrosis factor-mediated signaling pathway // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0051798 // positive regulation of hair follicle development // inferred from electronic annotation /// 0097191 // extrinsic apoptotic signaling pathway // inferred from mutant phenotype /// 0097191 // extrinsic apoptotic signaling pathway // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0043235 // receptor complex // inferred from direct assay","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019900 // kinase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0060090 // binding, bridging // inferred from physical interaction /// 0070513 // death domain binding // inferred from physical interaction","chr16:67188087-67194201 (-) // 88.74 // q22.1"]
["11737441_a_at",0.16349936,0.20408964,0.1566968,-0.39125776,-0.22076702,-0.1566968,0.005170038,0.0038252047,1.34817,0.43100244,1.34817,"up","ST7L",54879,"0030308 // negative regulation of cell growth // inferred from sequence or structural similarity /// 0030308 // negative regulation of cell growth // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:113066142-113162040 (-) // 94.6 // p13.2"]
["11727732_a_at",0.33569813,0.3740754,0.36076498,-0.5530305,-0.54713106,-0.33569765,0.0012713709,0.0003214017,1.7844332,0.8354659,1.7844332,"up","LCN6","158062 /// 414332","0006810 // transport // inferred from electronic annotation /// 0007338 // single fertilization // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","","chr9:139632618-139637411 (-) // 60.86 // q34.3"]
["11759981_x_at",0.15410328,0.2270236,0.19390011,-0.15410376,-0.15787601,-0.27655315,0.0020370672,0.0010299383,1.3084451,0.38785332,1.3084451,"up","TSC1",7248,"0001822 // kidney development // inferred from electronic annotation /// 0001843 // neural tube closure // inferred from electronic annotation /// 0001952 // regulation of cell-matrix adhesion // inferred from mutant phenotype /// 0006407 // rRNA export from nucleus // inferred from mutant phenotype /// 0006417 // regulation of translation // inferred from direct assay /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0007160 // cell-matrix adhesion // inferred from mutant phenotype /// 0007399 // nervous system development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0009790 // embryo development // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from mutant phenotype /// 0021766 // hippocampus development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0030030 // cell projection organization // inferred from electronic annotation /// 0032007 // negative regulation of TOR signaling cascade // inferred from mutant phenotype /// 0032862 // activation of Rho GTPase activity // inferred from direct assay /// 0032868 // response to insulin stimulus // inferred from direct assay /// 0032956 // regulation of actin cytoskeleton organization // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation /// 0043666 // regulation of phosphoprotein phosphatase activity // inferred from mutant phenotype /// 0045792 // negative regulation of cell size // inferred from electronic annotation /// 0045859 // regulation of protein kinase activity // inferred from electronic annotation /// 0050808 // synapse organization // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from direct assay /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0051492 // regulation of stress fiber assembly // inferred from direct assay /// 0051492 // regulation of stress fiber assembly // inferred from electronic annotation /// 0051893 // regulation of focal adhesion assembly // inferred from electronic annotation /// 0051894 // positive regulation of focal adhesion assembly // inferred from direct assay /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation","0005624 // membrane fraction // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005884 // actin filament // inferred from direct assay /// 0005938 // cell cortex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from direct assay /// 0030426 // growth cone // inferred from electronic annotation /// 0033596 // TSC1-TSC2 complex // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0044430 // cytoskeletal part // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0030695 // GTPase regulator activity // inferred from electronic annotation /// 0032794 // GTPase activating protein binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0047485 // protein N-terminus binding // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from physical interaction","chr9:135785315-135819982 (-) // 68.04 // q34.13"]
["11744731_at",0.17238379,0.20504332,0.2739315,-0.30007505,-0.2032628,-0.17238379,0.0018126566,0.0008168295,1.3588253,0.44236007,1.3588253,"up","FLVCR1-AS1",642946,"","","","chr1:213029468-213031451 (-) // 84.48 // q32.3"]
["11751354_a_at",0.5130434,0.4627018,0.42922688,-0.42922688,-0.4976349,-0.4984913,0.00047635857,9.41905e-6,1.9231106,0.94344175,1.9231106,"up","HDHD1",8226,"0009117 // nucleotide metabolic process // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation","","0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:6967558-7066194 (-) // 86.17 // p22.31"]
["11755211_a_at",0.22716904,0.17493534,0.16779518,-0.16779518,-0.41567945,-0.41516876,0.004807013,0.0034882934,1.4367884,0.52284765,1.4367884,"up","DICER1",23405,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001942 // hair follicle development // inferred from electronic annotation /// 0006396 // RNA processing // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0010070 // zygote asymmetric cell division // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010626 // negative regulation of Schwann cell proliferation // inferred from sequence or structural similarity /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0014040 // positive regulation of Schwann cell differentiation // inferred from sequence or structural similarity /// 0019827 // stem cell maintenance // inferred from electronic annotation /// 0021522 // spinal cord motor neuron differentiation // inferred from electronic annotation /// 0021675 // nerve development // inferred from sequence or structural similarity /// 0021889 // olfactory bulb interneuron differentiation // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030422 // production of siRNA involved in RNA interference // inferred from direct assay /// 0030422 // production of siRNA involved in RNA interference // inferred from electronic annotation /// 0030423 // targeting of mRNA for destruction involved in RNA interference // inferred from mutant phenotype /// 0031047 // gene silencing by RNA // inferred from electronic annotation /// 0031054 // pre-miRNA processing // inferred from direct assay /// 0031054 // pre-miRNA processing // inferred from electronic annotation /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0031643 // positive regulation of myelination // inferred from sequence or structural similarity /// 0032290 // peripheral nervous system myelin formation // inferred from sequence or structural similarity /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0035196 // production of miRNAs involved in gene silencing by miRNA // inferred from sequence or structural similarity /// 0035196 // production of miRNAs involved in gene silencing by miRNA // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0042487 // regulation of odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045069 // regulation of viral genome replication // inferred from electronic annotation /// 0045595 // regulation of cell differentiation // inferred from electronic annotation /// 0045664 // regulation of neuron differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048536 // spleen development // inferred from electronic annotation /// 0048565 // digestive tract development // inferred from electronic annotation /// 0048730 // epidermis morphogenesis // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from electronic annotation /// 0048812 // neuron projection morphogenesis // inferred from sequence or structural similarity /// 0050767 // regulation of neurogenesis // inferred from electronic annotation /// 0051225 // spindle assembly // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from electronic annotation /// 0055013 // cardiac muscle cell development // inferred from electronic annotation /// 0060576 // intestinal epithelial cell development // inferred from electronic annotation /// 0070173 // regulation of enamel mineralization // inferred from electronic annotation /// 0071335 // hair follicle cell proliferation // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016442 // RNA-induced silencing complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0003725 // double-stranded RNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0004525 // ribonuclease III activity // inferred from direct assay /// 0004525 // ribonuclease III activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016891 // endoribonuclease activity, producing 5'-phosphomonoesters // inferred from electronic annotation /// 0035198 // miRNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:95556663-95603165 (-) // 98.12 // q32.13"]
["11757588_a_at",0.41474342,0.6349678,0.49385548,-0.49902344,-0.41474342,-0.6051159,0.001213793,0.00027234544,2.029067,1.0208166,2.029067,"up","ALG5",29880,"0006486 // protein glycosylation // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004576 // oligosaccharyl transferase activity // traceable author statement /// 0004581 // dolichyl-phosphate beta-glucosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr13:37523980-37527163 (-) // 95.54 // q13.3"]
["11733038_x_at",0.13455296,0.19118214,0.14121723,-0.34891033,-0.13455296,-0.21276093,0.005350133,0.003995319,1.3083291,0.38772553,1.3083291,"up","DPH3",285381,"0017183 // peptidyl-diphthamide biosynthetic process from peptidyl-histidine // inferred from sequence or structural similarity /// 0050709 // negative regulation of protein secretion // inferred from direct assay /// 0051099 // positive regulation of binding // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:16298568-16306604 (-) // 87.74 // p25.1"]
["11748695_a_at",0.35404348,0.3056593,0.28059864,-0.30948877,-0.28152466,-0.28059912,0.0005467525,1.3723737e-5,1.5198946,0.6039713,1.5198946,"up","SYNGR1",9145,"0006605 // protein targeting // inferred from electronic annotation /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from sequence or structural similarity /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048172 // regulation of short-term neuronal synaptic plasticity // inferred from sequence or structural similarity /// 0048172 // regulation of short-term neuronal synaptic plasticity // inferred from electronic annotation","0005887 // integral to plasma membrane // traceable author statement /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","","chr22:39745995-39773958 (+) // 94.81 // q13.1"]
["11727874_a_at",0.25428867,0.17076492,0.18394184,-0.20845413,-0.17076492,-0.30961227,0.0019051586,0.000900889,1.3496721,0.4326089,1.3496721,"up","ZFYVE21",79038,"","0005925 // focal adhesion // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0046872 // metal ion binding // inferred from electronic annotation","chr14:104182091-104200001 (+) // 94.96 // q32.33"]
["11754643_a_at",0.27578306,0.27249384,0.293643,-0.42713976,-0.27249336,-0.5796623,0.002422976,0.0013544457,1.6324873,0.7070718,1.6324873,"up","TMEM234",56063,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:32681801-32683349 (-) // 84.79 // p35.1"]
["11731677_at",0.5325651,0.38779736,0.580348,-0.3942914,-0.4020095,-0.38779736,0.0008743986,0.000103180544,1.8595277,0.8949362,1.8595277,"up","AKR1C4",1109,"0006699 // bile acid biosynthetic process // traceable author statement /// 0008202 // steroid metabolic process // traceable author statement /// 0008206 // bile acid metabolic process // traceable author statement /// 0008209 // androgen metabolic process // traceable author statement /// 0015721 // bile acid and bile salt transport // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0044597 // daunorubicin metabolic process // inferred from mutant phenotype /// 0044598 // doxorubicin metabolic process // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0071395 // cellular response to jasmonic acid stimulus // inferred from direct assay","0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0001758 // retinal dehydrogenase activity // inferred from direct assay /// 0004033 // aldo-keto reductase (NADP) activity // traceable author statement /// 0009055 // electron carrier activity // traceable author statement /// 0015125 // bile acid transmembrane transporter activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016655 // oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor // inferred from direct assay /// 0047023 // androsterone dehydrogenase activity // inferred from direct assay /// 0047042 // androsterone dehydrogenase (B-specific) activity // inferred from electronic annotation /// 0047743 // chlordecone reductase activity // inferred from electronic annotation","chr10:5238190-5260912 (+) // 88.04 // p15.1"]
["11716161_s_at",0.42352676,0.42352676,0.3630929,-0.46375608,-0.3630929,-0.3764596,0.0006160735,2.7756263e-5,1.7465223,0.804485,1.7465223,"up","LBH",81606,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","","chr2:30454397-30482894 (+) // 96.76 // p23.1"]
["11737387_x_at",0.13787317,0.35147476,0.21581316,-0.21945953,-0.21986341,-0.13787317,0.0045984173,0.0032893931,1.3448566,0.42745242,1.3448566,"up","S100PBP",64766,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0048306 // calcium-dependent protein binding // inferred from physical interaction","chr1:33283175-33302756 (+) // 36.61 // p35.1"]
["11720923_a_at",0.29255486,0.20398808,0.20890713,-0.36366177,-0.20398808,-0.24835968,0.0017967653,0.00080088375,1.421243,0.5071532,1.421243,"up","HCP5",0.20398808,0.20890713,"HCP5",10866,"0006952 // defense response // traceable author statement"]
["11726908_a_at",0.46397495,0.4851942,0.47210312,-0.46397448,-0.60626936,-0.5083618,0.0005607693,1.9320216e-5,1.9999436,0.99995935,1.9999436,"up","ANO2",57101,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0034707 // chloride channel complex // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005229 // intracellular calcium activated chloride channel activity // inferred from direct assay /// 0005254 // chloride channel activity // inferred from electronic annotation","chr12:5671816-6055398 (-) // 97.11 // p13.31"]
["11757609_s_at",0.16640091,0.1942749,0.16931248,-0.16640091,-0.2751932,-0.4281292,0.0049674492,0.003643224,1.3818208,0.46657056,1.3818208,"up","DLG5",9231,"0007165 // signal transduction // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0016337 // cell-cell adhesion // non-traceable author statement /// 0035556 // intracellular signal transduction // non-traceable author statement /// 0042981 // regulation of apoptotic process // inferred from electronic annotation","0005622 // intracellular // non-traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005886 // plasma membrane // non-traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0008013 // beta-catenin binding // inferred from direct assay /// 0008092 // cytoskeletal protein binding // inferred from direct assay /// 0030159 // receptor signaling complex scaffold activity // non-traceable author statement","chr10:79550548-79551114 (-) // 100.0 // q22.3"]
["11739043_a_at",0.3743372,0.17698097,0.1918912,-0.23152494,-0.2659135,-0.17698097,0.0035328772,0.002318736,1.3875531,0.47254294,1.3875531,"up","LIMK2",3985,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016310 // phosphorylation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0042325 // regulation of phosphorylation // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005801 // cis-Golgi network // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr22:31644296-31676059 (+) // 99.13 // q12.2"]
["11740656_a_at",0.5751152,0.65256786,0.5952468,-0.63676405,-0.612689,-0.5751152,0.00031084043,2.0233713e-6,2.3227482,1.2158327,2.3227482,"up","HMGA2",8091,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001837 // epithelial to mesenchymal transition // inferred from mutant phenotype /// 0002062 // chondrocyte differentiation // inferred from direct assay /// 0003131 // mesodermal-endodermal cell signaling // inferred from mutant phenotype /// 0006284 // base-excision repair // inferred from direct assay /// 0006325 // chromatin organization // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007095 // mitotic cell cycle G2/M transition DNA damage checkpoint // inferred from direct assay /// 0007275 // multicellular organismal development // traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0009615 // response to virus // inferred from expression pattern /// 0010564 // regulation of cell cycle process // inferred from direct assay /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0021846 // cell proliferation in forebrain // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0030261 // chromosome condensation // inferred from electronic annotation /// 0030325 // adrenal gland development // inferred from electronic annotation /// 0031052 // chromosome breakage // inferred from direct assay /// 0031507 // heterochromatin assembly // inferred from direct assay /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0035978 // histone H2A-S139 phosphorylation // inferred from direct assay /// 0035986 // senescence-associated heterochromatin focus assembly // inferred from direct assay /// 0035987 // endodermal cell differentiation // inferred from mutant phenotype /// 0035988 // chondrocyte proliferation // inferred from direct assay /// 0040008 // regulation of growth // inferred from electronic annotation /// 0040018 // positive regulation of multicellular organism growth // inferred from electronic annotation /// 0042769 // DNA damage response, detection of DNA damage // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043392 // negative regulation of DNA binding // inferred from direct assay /// 0043922 // negative regulation by host of viral transcription // inferred from direct assay /// 0045444 // fat cell differentiation // inferred from mutant phenotype /// 0045869 // negative regulation of retroviral genome replication // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048333 // mesodermal cell differentiation // inferred from mutant phenotype /// 0048712 // negative regulation of astrocyte differentiation // inferred from electronic annotation /// 0048762 // mesenchymal cell differentiation // inferred from mutant phenotype /// 0048863 // stem cell differentiation // inferred from expression pattern /// 0051301 // cell division // inferred from electronic annotation /// 0060123 // regulation of growth hormone secretion // inferred from electronic annotation /// 0060612 // adipose tissue development // inferred from electronic annotation /// 0060613 // fat pad development // inferred from electronic annotation /// 0071158 // positive regulation of cell cycle arrest // inferred from direct assay /// 0090276 // regulation of peptide hormone secretion // inferred from electronic annotation /// 0090402 // oncogene-induced senescence // inferred from direct assay /// 2000036 // regulation of stem cell maintenance // inferred from mutant phenotype /// 2000036 // regulation of stem cell maintenance // traceable author statement /// 2000648 // positive regulation of stem cell proliferation // inferred from direct assay /// 2000648 // positive regulation of stem cell proliferation // inferred from mutant phenotype /// 2000648 // positive regulation of stem cell proliferation // inferred from electronic annotation /// 2000679 // positive regulation of transcription regulatory region DNA binding // inferred from direct assay /// 2000685 // positive regulation of cellular response to X-ray // inferred from direct assay /// 2000774 // positive regulation of cellular senescence // inferred from mutant phenotype /// 2001022 // positive regulation of response to DNA damage stimulus // inferred from direct assay /// 2001033 // negative regulation of double-strand break repair via nonhomologous end joining // inferred from direct assay /// 2001038 // regulation of cellular response to drug // inferred from direct assay","0000228 // nuclear chromosome // inferred from sequence or structural similarity /// 0000228 // nuclear chromosome // inferred from electronic annotation /// 0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0032993 // protein-DNA complex // inferred from direct assay /// 0035985 // senescence-associated heterochromatin focus // inferred from direct assay /// 0071141 // SMAD protein complex // inferred from direct assay","0000975 // regulatory region DNA binding // inferred from direct assay /// 0000988 // protein binding transcription factor activity // inferred from direct assay /// 0001047 // core promoter binding // inferred from direct assay /// 0001071 // nucleic acid binding transcription factor activity // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003680 // AT DNA binding // inferred from direct assay /// 0003680 // AT DNA binding // inferred from mutant phenotype /// 0003680 // AT DNA binding // inferred from electronic annotation /// 0003680 // AT DNA binding // traceable author statement /// 0003906 // DNA-(apurinic or apyrimidinic site) lyase activity // inferred from direct assay /// 0004677 // DNA-dependent protein kinase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008301 // DNA binding, bending // inferred from direct assay /// 0008301 // DNA binding, bending // inferred from mutant phenotype /// 0031492 // nucleosomal DNA binding // inferred from direct assay /// 0035497 // cAMP response element binding // inferred from direct assay /// 0035500 // MH2 domain binding // inferred from direct assay /// 0035501 // MH1 domain binding // inferred from direct assay /// 0046332 // SMAD binding // inferred from physical interaction /// 0051575 // 5'-deoxyribose-5-phosphate lyase activity // inferred from direct assay /// 0070742 // C2H2 zinc finger domain binding // inferred from mutant phenotype","chr12:66218239-66360070 (+) // 91.11 // q14.3"]
["11718673_at",0.21456909,0.291646,0.19120121,-0.22410107,-0.27766228,-0.19120121,0.0012361597,0.0003001058,1.378845,0.4634603,1.378845,"up","TMEM245",23731,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","","chr9:111777431-111882230 (-) // 82.14 // q31.3"]
["11744216_at",0.20454407,0.13213253,0.19328594,-0.132133,-0.31109953,-0.27577257,0.0033366885,0.0021503079,1.3345215,0.41632253,1.3345215,"up","C15orf57",90416,"","","","chr15:40845008-40857252 (-) // 95.3 // q15.1"]
["11758134_s_at",0.2530346,0.30989885,0.37572002,-0.41631508,-0.31340456,-0.2530346,0.001395873,0.00041960352,1.558836,0.6404692,1.558836,"up","PPM1H",57460,"0008152 // metabolic process // inferred from electronic annotation","","0003824 // catalytic activity // inferred from electronic annotation /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr12:63037782-63038343 (-) // 95.37 // q14.1"]
["11734226_a_at",0.26172638,0.16753578,0.20223618,-0.21447945,-0.16753578,-0.2436428,0.0012233602,0.00028914431,1.3370488,0.41905212,1.3370488,"up","LIMCH1",22998,"0031032 // actomyosin structure organization // inferred from electronic annotation","","0003779 // actin binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:41614918-41702059 (+) // 97.92 // p13"]
["11756903_a_at",0.773129,0.626348,0.8456445,-0.66215277,-0.9843168,-0.626348,0.001277893,0.00032523135,2.8401747,1.5059797,2.8401747,"up","HHAT",55733,"0007224 // smoothened signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0018345 // protein palmitoylation // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0016409 // palmitoyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation","chr1:210502643-210849631 (+) // 87.07 // q32.2"]
["11737880_a_at",0.2576599,0.20954227,0.18192005,-0.34398365,-0.38402176,-0.18192005,0.0024523602,0.0013764072,1.4336398,0.5196826,1.4336398,"up","GALNT2",2590,"0002378 // immunoglobulin biosynthetic process // inferred from direct assay /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0016266 // O-glycan processing // traceable author statement /// 0018242 // protein O-linked glycosylation via serine // inferred from direct assay /// 0018243 // protein O-linked glycosylation via threonine // inferred from direct assay /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005795 // Golgi stack // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030173 // integral to Golgi membrane // non-traceable author statement /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0004653 // polypeptide N-acetylgalactosaminyltransferase activity // inferred from direct assay /// 0004653 // polypeptide N-acetylgalactosaminyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from direct assay /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr1:230202955-230417870 (+) // 98.16 // q42.13"]
["11722409_at",0.27818394,0.19947052,0.27558613,-0.31621933,-0.22879791,-0.19947052,0.0012808557,0.00033029073,1.4134715,0.49924278,1.4134715,"up","GALNT7",51809,"0005975 // carbohydrate metabolic process // traceable author statement /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006493 // protein O-linked glycosylation // traceable author statement /// 0006493 // protein O-linked glycosylation // inferred from electronic annotation /// 0016266 // O-glycan processing // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004653 // polypeptide N-acetylgalactosaminyltransferase activity // inferred from electronic annotation /// 0004653 // polypeptide N-acetylgalactosaminyltransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr4:174089912-174245118 (+) // 97.45 // q34.1"]
["11720068_a_at",0.25904608,0.2513461,0.32506514,-0.2513461,-0.27921104,-0.39499092,0.0012306612,0.00029680028,1.5021218,0.5870018,1.5021218,"up","APH1B",83464,"0006915 // apoptotic process // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007220 // Notch receptor processing // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0016485 // protein processing // inferred from direct assay /// 0016485 // protein processing // inferred from electronic annotation /// 0031293 // membrane protein intracellular domain proteolysis // traceable author statement /// 0043085 // positive regulation of catalytic activity // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from direct assay","chr15:63569717-63601318 (+) // 91.93 // q22.2"]
["11716906_a_at",0.2811842,0.23560476,0.23329067,-0.23329067,-0.23329067,-0.39762735,0.0017019173,0.0006999703,1.452055,0.53809613,1.452055,"up","CDH1",999,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0001829 // trophectodermal cell differentiation // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // non-traceable author statement /// 0007416 // synapse assembly // inferred from electronic annotation /// 0009636 // response to toxin // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from direct assay /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0019538 // protein metabolic process // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0022408 // negative regulation of cell-cell adhesion // inferred from mutant phenotype /// 0031175 // neuron projection development // inferred from electronic annotation /// 0032880 // regulation of protein localization // inferred from electronic annotation /// 0033561 // regulation of water loss via skin // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0042993 // positive regulation of transcription factor import into nucleus // inferred from direct assay /// 0043281 // regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0045216 // cell-cell junction organization // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0050776 // regulation of immune response // traceable author statement /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0060662 // salivary gland cavitation // inferred from electronic annotation /// 0060693 // regulation of branching involved in salivary gland morphogenesis // inferred from electronic annotation /// 0070830 // tight junction assembly // inferred from electronic annotation /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation /// 0071285 // cellular response to lithium ion // inferred from direct assay /// 0071681 // cellular response to indole-3-methanol // inferred from direct assay /// 0072659 // protein localization in plasma membrane // inferred from direct assay /// 2000008 // regulation of protein localization at cell surface // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from mutant phenotype /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from direct assay /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0009898 // internal side of plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016235 // aggresome // inferred from direct assay /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016328 // lateral plasma membrane // inferred from direct assay /// 0016342 // catenin complex // inferred from direct assay /// 0030054 // cell junction // inferred from direct assay /// 0030054 // cell junction // traceable author statement /// 0030054 // cell junction // inferred from electronic annotation /// 0033268 // node of Ranvier // inferred from electronic annotation /// 0043219 // lateral loop // inferred from electronic annotation /// 0043220 // Schmidt-Lanterman incisure // inferred from electronic annotation /// 0043296 // apical junction complex // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from direct assay /// 0008013 // beta-catenin binding // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0030506 // ankyrin binding // inferred from physical interaction /// 0032794 // GTPase activating protein binding // inferred from physical interaction /// 0042153 // RPTP-like protein binding // inferred from electronic annotation /// 0045295 // gamma-catenin binding // inferred from physical interaction /// 0050839 // cell adhesion molecule binding // non-traceable author statement","chr16:68771127-68869443 (+) // 85.55 // q22.1"]
["11726614_at",0.1893282,0.21934414,0.2996168,-0.215024,-0.21561146,-0.1893282,0.001091852,0.00020167766,1.3591936,0.44275093,1.3591936,"up","CDH2",1000,"0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007157 // heterophilic cell-cell adhesion // inferred from electronic annotation /// 0007416 // synapse assembly // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0016339 // calcium-dependent cell-cell adhesion // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0031641 // regulation of myelination // inferred from electronic annotation /// 0032880 // regulation of protein localization // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0042692 // muscle cell differentiation // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0050770 // regulation of axonogenesis // inferred from electronic annotation /// 0051149 // positive regulation of muscle cell differentiation // traceable author statement","0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0005912 // adherens junction // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from direct assay /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0005916 // fascia adherens // inferred from electronic annotation /// 0014704 // intercalated disc // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016342 // catenin complex // inferred from direct assay /// 0030027 // lamellipodium // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0044456 // synapse part // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008013 // beta-catenin binding // traceable author statement /// 0008013 // beta-catenin binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from electronic annotation /// 0042153 // RPTP-like protein binding // inferred from electronic annotation /// 0045294 // alpha-catenin binding // inferred from physical interaction /// 0045295 // gamma-catenin binding // inferred from physical interaction","chr18:25530933-25757750 (-) // 95.53 // q12.1"]
["11736202_a_at",0.26139402,0.2339797,0.29549885,-0.23397923,-0.30764246,-0.4077692,0.0013910277,0.0004079629,1.4949402,0.5800878,1.4949402,"up","CDKAL1",54901,"0008033 // tRNA processing // inferred from electronic annotation /// 0009451 // RNA modification // inferred from electronic annotation /// 0043412 // macromolecule modification // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation","chr6:20534685-21232593 (+) // 84.32 // p22.3"]
["11752328_a_at",0.33145618,0.51116943,0.41863394,-0.57883406,-0.53802204,-0.3314557,0.0016147236,0.0006161828,1.8701973,0.90319043,1.8701973,"up","IGF1R",3480,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0006955 // immune response // inferred from mutant phenotype /// 0007165 // signal transduction // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0014065 // phosphatidylinositol 3-kinase cascade // inferred by curator /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030010 // establishment of cell polarity // inferred from electronic annotation /// 0030238 // male sex determination // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0030879 // mammary gland development // inferred from electronic annotation /// 0031017 // exocrine pancreas development // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0032467 // positive regulation of cytokinesis // inferred from electronic annotation /// 0033197 // response to vitamin E // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043409 // negative regulation of MAPK cascade // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from mutant phenotype /// 0045768 // positive regulation of anti-apoptosis // inferred from electronic annotation /// 0046328 // regulation of JNK cascade // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048009 // insulin-like growth factor receptor signaling pathway // inferred from direct assay /// 0048009 // insulin-like growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // inferred from direct assay /// 0051054 // positive regulation of DNA metabolic process // inferred from electronic annotation /// 0051262 // protein tetramerization // inferred from direct assay /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0051389 // inactivation of MAPKK activity // inferred from direct assay /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0051898 // negative regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0060740 // prostate gland epithelium morphogenesis // inferred from electronic annotation /// 0090031 // positive regulation of steroid hormone biosynthetic process // inferred from electronic annotation","0005792 // microsome // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred by curator /// 0005901 // caveola // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005010 // insulin-like growth factor-activated receptor activity // inferred from direct assay /// 0005010 // insulin-like growth factor-activated receptor activity // traceable author statement /// 0005158 // insulin receptor binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005520 // insulin-like growth factor binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0031994 // insulin-like growth factor I binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from physical interaction /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation /// 0043559 // insulin binding // inferred from physical interaction /// 0043560 // insulin receptor substrate binding // inferred from physical interaction /// 0043560 // insulin receptor substrate binding // inferred from electronic annotation","chr15:99192810-99460184 (+) // 99.96 // q26.3"]
["11743373_a_at",0.18057632,0.20589828,0.23231316,-0.18057632,-0.21953678,-0.28859997,0.0011442282,0.00023751851,1.3526922,0.43583363,1.3526922,"up","C15orf23",90417,"0000070 // mitotic sister chromatid segregation // inferred from mutant phenotype /// 0000090 // mitotic anaphase // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0007051 // spindle organization // inferred from mutant phenotype /// 0007059 // chromosome segregation // inferred from mutant phenotype /// 0007067 // mitosis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051988 // regulation of attachment of spindle microtubules to kinetochore // inferred from mutant phenotype","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0000922 // spindle pole // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0035371 // microtubule plus end // inferred from direct assay /// 0072686 // mitotic spindle // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr15:40674921-40686739 (+) // 89.82 // q15.1"]
["11729630_a_at",0.28860283,0.22138786,0.21061802,-0.21061802,-0.35508347,-0.2254219,0.0016202792,0.0006332612,1.4180522,0.50391066,1.4180522,"up","AP3M1",26985,"0006622 // protein targeting to lysosome // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005764 // lysosome // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0030131 // clathrin adaptor complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr10:75880013-75910826 (-) // 92.0 // q22.2"]
["11718303_a_at",0.30330658,0.16716671,0.14783764,-0.14783764,-0.1836586,-0.2113018,0.0029175605,0.0017729017,1.3077043,0.38703632,1.3077043,"up","PAFAH1B3",5050,"0006629 // lipid metabolic process // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0016042 // lipid catabolic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0003847 // 1-alkyl-2-acetylglycerophosphocholine esterase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation","chr19:42801186-42806929 (-) // 95.72 // q13.2"]
["11747081_a_at",0.51107836,0.27251482,0.4721427,-0.32873487,-0.368968,-0.27251482,0.0017193076,0.00071636395,1.6724749,0.7419845,1.6724749,"up","INPP5A",3632,"0007154 // cell communication // non-traceable author statement /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation","0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0004445 // inositol-polyphosphate 5-phosphatase activity // non-traceable author statement /// 0004445 // inositol-polyphosphate 5-phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042731 // PH domain binding // inferred from physical interaction /// 0052658 // inositol-1,4,5-trisphosphate 5-phosphatase activity // inferred from electronic annotation /// 0052659 // inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity // inferred from electronic annotation","chr10:134351352-134591381 (+) // 81.57 // q26.3"]
["11728022_a_at",0.26962757,0.31335354,0.32794094,-0.29767418,-0.26962757,-0.30870914,0.00047635857,9.246722e-6,1.5111474,0.59564435,1.5111474,"up","TMEM45A",55076,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:100211462-100296290 (+) // 96.61 // q12.2"]
["11724134_a_at",0.20322132,0.2192545,0.1505847,-0.38276005,-0.2703743,-0.15058517,0.0040863724,0.0028245598,1.3745189,0.45892668,1.3745189,"up","SLC12A2",6558,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0015696 // ammonium transport // inferred from direct assay /// 0030321 // transepithelial chloride transport // inferred from direct assay /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0050910 // detection of mechanical stimulus involved in sensory perception of sound // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0060444 // branching involved in mammary gland duct morphogenesis // inferred from electronic annotation /// 0060763 // mammary duct terminal end bud growth // inferred from electronic annotation /// 0070634 // transepithelial ammonium transport // inferred from direct assay","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0008511 // sodium:potassium:chloride symporter activity // traceable author statement /// 0015293 // symporter activity // inferred from electronic annotation /// 0015377 // cation:chloride symporter activity // inferred from electronic annotation /// 0051739 // ammonia transmembrane transporter activity // inferred from direct assay","chr5:127419457-127525374 (+) // 92.82 // q23.3"]
["11746958_s_at",0.54025936,0.31937218,0.20904636,-0.2232809,-0.20904636,-0.2886672,0.005377771,0.0040252223,1.512104,0.59655744,1.512104,"up","ASIC1",41,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // non-traceable author statement /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0009268 // response to pH // traceable author statement /// 0035725 // sodium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005272 // sodium channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015280 // ligand-gated sodium channel activity // non-traceable author statement /// 0015280 // ligand-gated sodium channel activity // inferred from electronic annotation /// 0015280 // ligand-gated sodium channel activity // traceable author statement","chr12:50451535-50477393 (+) // 95.29 // q13.12"]
["11758904_at",0.25209808,0.22771883,0.21697235,-0.21697187,-0.29662323,-0.31868172,0.0008613762,9.7631746e-5,1.423743,0.50968874,1.423743,"up","RCAN3",11123,"0009653 // anatomical structure morphogenesis // traceable author statement /// 0019722 // calcium-mediated signaling // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0031013 // troponin I binding // inferred from physical interaction","chr1:24829386-24863510 (+) // 98.3 // p36.11"]
["11756334_x_at",0.17110825,0.20985413,0.21870327,-0.17110825,-0.1789875,-0.39780235,0.005395642,0.00404557,1.3652716,0.4491879,1.3652716,"up","ANXA3",306,"0006909 // phagocytosis // inferred from direct assay /// 0010595 // positive regulation of endothelial cell migration // inferred from direct assay /// 0021766 // hippocampus development // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from direct assay /// 0043312 // neutrophil degranulation // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from direct assay /// 0051054 // positive regulation of DNA metabolic process // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0070848 // response to growth factor stimulus // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // inferred from direct assay /// 0042581 // specific granule // inferred from direct assay /// 0043025 // neuronal cell body // inferred from electronic annotation","0004859 // phospholipase inhibitor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005544 // calcium-dependent phospholipid binding // inferred from direct assay /// 0005544 // calcium-dependent phospholipid binding // inferred from electronic annotation /// 0019834 // phospholipase A2 inhibitor activity // inferred from electronic annotation","chr4:79472900-79531569 (+) // 97.94 // q21.21"]
["11728249_a_at",0.41209936,0.2452817,0.23507214,-0.38842344,-0.23507166,-0.31688833,0.0021076347,0.0010855861,1.52726,0.6109456,1.52726,"up","TSFM",10102,"0006412 // translation // inferred from electronic annotation /// 0006414 // translational elongation // traceable author statement /// 0006414 // translational elongation // inferred from electronic annotation /// 0032784 // regulation of transcription elongation, DNA-dependent // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement","0003746 // translation elongation factor activity // inferred from electronic annotation","chr12:58176527-58191367 (+) // 97.13 // q14.1"]
["11754862_a_at",0.23902512,0.15302849,0.19738007,-0.29650974,-0.42689705,-0.15302849,0.0054940553,0.004143019,1.403105,0.488623,1.403105,"up","RARRES2",5919,"0001523 // retinoid metabolic process // inferred from direct assay /// 0001701 // in utero embryonic development // inferred from expression pattern /// 0010759 // positive regulation of macrophage chemotaxis // inferred from mutant phenotype /// 0048566 // embryonic digestive tract development // inferred from mutant phenotype /// 0050873 // brown fat cell differentiation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay","0004872 // receptor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction","chr7:150035407-150038754 (-) // 99.74 // q36.1"]
["11738993_at",0.348485,0.56924915,0.51907873,-0.60875344,-0.34848523,-0.50191665,0.0016560986,0.000665435,1.9525002,0.96532273,1.9525002,"up","SYT4",6860,"0006810 // transport // inferred from electronic annotation /// 0007269 // neurotransmitter secretion // inferred from electronic annotation","0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr18:40847856-40857615 (-) // 99.13 // q12.3"]
["11754106_a_at",0.35447884,0.28970432,0.1540451,-0.1540451,-0.23735905,-0.19878674,0.0030718595,0.0019142897,1.3782202,0.4628064,1.3782202,"up","EFNA1",1942,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000187 // activation of MAPK activity // inferred from electronic annotation /// 0001525 // angiogenesis // inferred from electronic annotation /// 0003180 // aortic valve morphogenesis // inferred from sequence or structural similarity /// 0003180 // aortic valve morphogenesis // inferred from electronic annotation /// 0003183 // mitral valve morphogenesis // inferred from sequence or structural similarity /// 0003183 // mitral valve morphogenesis // inferred from electronic annotation /// 0003199 // endocardial cushion to mesenchymal transition involved in heart valve formation // inferred from sequence or structural similarity /// 0003199 // endocardial cushion to mesenchymal transition involved in heart valve formation // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0010719 // negative regulation of epithelial to mesenchymal transition // inferred from sequence or structural similarity /// 0010719 // negative regulation of epithelial to mesenchymal transition // inferred from electronic annotation /// 0014028 // notochord formation // inferred from electronic annotation /// 0016477 // cell migration // inferred from direct assay /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0033628 // regulation of cell adhesion mediated by integrin // inferred from direct assay /// 0034446 // substrate adhesion-dependent cell spreading // inferred from direct assay /// 0043535 // regulation of blood vessel endothelial cell migration // inferred from electronic annotation /// 0045765 // regulation of angiogenesis // inferred from electronic annotation /// 0048013 // ephrin receptor signaling pathway // inferred from direct assay /// 0048013 // ephrin receptor signaling pathway // inferred from electronic annotation /// 0050730 // regulation of peptidyl-tyrosine phosphorylation // inferred from sequence or structural similarity /// 0050730 // regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0050770 // regulation of axonogenesis // inferred from electronic annotation /// 0061002 // negative regulation of dendritic spine morphogenesis // inferred from sequence or structural similarity /// 0061002 // negative regulation of dendritic spine morphogenesis // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation /// 0046658 // anchored to plasma membrane // inferred from electronic annotation","0005102 // receptor binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0046875 // ephrin receptor binding // inferred from physical interaction /// 0046875 // ephrin receptor binding // traceable author statement","chr1:155100425-155106688 (+) // 89.68 // q22"]
["11715880_a_at",0.42373466,0.37559223,0.25658894,-0.25658894,-0.36205578,-0.33952713,0.0013056329,0.00034301935,1.5925764,0.6713626,1.5925764,"up","PITPNA",5306,"0006629 // lipid metabolic process // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007601 // visual perception // traceable author statement /// 0015914 // phospholipid transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0008525 // phosphatidylcholine transporter activity // traceable author statement /// 0008526 // phosphatidylinositol transporter activity // traceable author statement","chr17:1421133-1466110 (-) // 94.49 // p13.3"]
["11750037_a_at",0.32249212,0.2576089,0.33608675,-0.30366516,-0.38720226,-0.2576089,0.0010019254,0.00015922071,1.5385323,0.62155473,1.5385323,"up","CHMP7",91782,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0016197 // endosomal transport // traceable author statement /// 0045324 // late endosome to vacuole transport // inferred from mutant phenotype","0000815 // ESCRT III complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0008565 // protein transporter activity // inferred from mutant phenotype","chr8:23104155-23116587 (+) // 98.85 // p21.3"]
["11724435_a_at",0.17610121,0.22046661,0.28479576,-0.27576733,-0.21170378,-0.17610121,0.0014617549,0.00047654973,1.3644428,0.44831195,1.3644428,"up","TPK1",27010,"0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006772 // thiamine metabolic process // inferred from electronic annotation /// 0009229 // thiamine diphosphate biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0042723 // thiamine-containing compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004788 // thiamine diphosphokinase activity // inferred from electronic annotation /// 0004788 // thiamine diphosphokinase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr7:144149033-144533146 (-) // 95.21 // q35"]
["11733126_a_at",0.23636913,0.24117756,0.22029114,-0.22860527,-0.23043346,-0.22029114,0.00015425935,3.3216915e-7,1.374642,0.4590559,1.374642,"up","PRIM1",5557,"0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0000722 // telomere maintenance via recombination // traceable author statement /// 0000723 // telomere maintenance // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0006269 // DNA replication, synthesis of RNA primer // inferred from electronic annotation /// 0006269 // DNA replication, synthesis of RNA primer // traceable author statement /// 0006270 // DNA-dependent DNA replication initiation // traceable author statement /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0032201 // telomere maintenance via semi-conservative replication // traceable author statement","0005654 // nucleoplasm // traceable author statement /// 0005658 // alpha DNA polymerase:primase complex // inferred from electronic annotation","0003896 // DNA primase activity // inferred from electronic annotation /// 0003896 // DNA primase activity // traceable author statement /// 0003899 // DNA-directed RNA polymerase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:57125009-57146167 (-) // 83.75 // q13.3"]
["11724505_at",0.21413803,0.14330769,0.19548702,-0.27287292,-0.1895361,-0.14330769,0.0018932574,0.00088384625,1.3069613,0.38621646,1.3069613,"up","MIS18A",54069,"0006334 // nucleosome assembly // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0051301 // cell division // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay","","chr21:33640538-33651467 (-) // 78.82 // q22.11"]
["11724160_a_at",0.3414545,0.42783546,0.3963294,-0.5801692,-0.3414545,-0.34451437,0.0016147236,0.00061580446,1.7539235,0.81058586,1.7539235,"up","GXYLT1",283464,"0016266 // O-glycan processing // inferred from direct assay","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016763 // transferase activity, transferring pentosyl groups // inferred from electronic annotation /// 0035252 // UDP-xylosyltransferase activity // inferred from direct assay","chr12:42475646-42538673 (-) // 87.68 // q12"]
["11747724_a_at",0.18983269,0.31064892,0.23065996,-0.18983316,-0.26444054,-0.30546713,0.0015242294,0.00053365715,1.4112375,0.4969608,1.4112375,"up","NUDT12",83594,"0006742 // NADP catabolic process // inferred from direct assay /// 0019677 // NAD catabolic process // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation","0000210 // NAD+ diphosphatase activity // inferred from direct assay /// 0000210 // NAD+ diphosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0035529 // NADH pyrophosphatase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:102886208-102898490 (-) // 99.38 // q21.2"]
["11722903_s_at",0.22649956,0.28641033,0.31917763,-0.34090853,-0.3308878,-0.22650003,0.0011259156,0.00022387244,1.4915317,0.5767946,1.4915317,"up","GSTT2","2953 /// 653689","","0005737 // cytoplasm // inferred from electronic annotation","0004364 // glutathione transferase activity // inferred from electronic annotation /// 0004364 // glutathione transferase activity // non-traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation","chr22:24322338-24326106 (+) // 68.89 // q11.23"]
["11733884_a_at",0.3038044,0.23604393,0.1548891,-0.18242931,-0.1548891,-0.19964218,0.0017967653,0.00079903967,1.3292072,0.410566,1.3292072,"up","DEPDC1",55635,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from direct assay","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:68939836-68962904 (-) // 82.08 // p31.2"]
["11719122_at",0.26740646,0.19543743,0.19847202,-0.19543743,-0.29680443,-0.29193974,0.0012233602,0.00028641985,1.3965164,0.4818325,1.3965164,"up","DPCD",25911,"0003351 // epithelial cilium movement // inferred from electronic annotation /// 0021670 // lateral ventricle development // inferred from electronic annotation /// 0021678 // third ventricle development // inferred from electronic annotation /// 0030317 // sperm motility // inferred from electronic annotation /// 0060972 // left/right pattern formation // inferred from electronic annotation","","","chr10:103348048-103369613 (+) // 98.48 // q24.32"]
["11718893_at",0.1622839,0.16935253,0.1330471,-0.1330471,-0.19507599,-0.41583776,0.011040431,0.009618774,1.3221459,0.40288147,1.3221459,"up","RFC1",5981,"0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0000722 // telomere maintenance via recombination // traceable author statement /// 0000723 // telomere maintenance // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0006261 // DNA-dependent DNA replication // traceable author statement /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006297 // nucleotide-excision repair, DNA gap filling // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007004 // telomere maintenance via telomerase // traceable author statement /// 0032201 // telomere maintenance via semi-conservative replication // traceable author statement /// 0043085 // positive regulation of catalytic activity // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005663 // DNA replication factor C complex // inferred from direct assay /// 0005663 // DNA replication factor C complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003689 // DNA clamp loader activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // traceable author statement /// 0008047 // enzyme activator activity // traceable author statement /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr4:39288726-39368020 (-) // 99.35 // p14"]
["11720564_a_at",0.38878536,0.38346958,0.31478024,-0.38804245,-0.3465414,-0.31478024,0.00059550256,2.3850878e-5,1.6382245,0.7121331,1.6382245,"up","NAV2",89797,"","0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr11:19734880-20143147 (+) // 98.11 // p15.1"]
["11755174_a_at",0.31512308,0.24845171,0.16622925,-0.16622925,-0.19408035,-0.19534683,0.0016183598,0.0006279682,1.3458213,0.42848682,1.3458213,"up","CGN",57530,"","0005923 // tight junction // inferred from direct assay /// 0005923 // tight junction // non-traceable author statement /// 0005923 // tight junction // inferred from electronic annotation /// 0016459 // myosin complex // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043296 // apical junction complex // inferred from electronic annotation","0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction","chr1:151506615-151511165 (+) // 80.41 // q21.3"]
["11715520_at",0.19026947,0.28459167,0.256876,-0.3329773,-0.2140789,-0.19026947,0.0017193909,0.0007228626,1.4041408,0.48968762,1.4041408,"up","MLEC",9761,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0030246 // carbohydrate binding // inferred from sequence or structural similarity","chr12:121124948-121139662 (+) // 92.78 // q24.31"]
["11745353_a_at",0.14324665,0.1555872,0.16779089,-0.43689346,-0.31260395,-0.14324665,0.0074670613,0.0060617616,1.3690004,0.4531229,1.3690004,"up","C2orf54",79919,"","","","chr2:241825465-241831455 (-) // 81.61 // q37.3"]
["11737218_x_at",0.5324769,0.41920662,0.076756,-0.09073782,-0.076756,-0.083314896,0.0369682,0.0358219,1.3438909,0.42641607,1.3438909,"up","HHLA3",11147,"","","0005515 // protein binding // inferred from physical interaction","chr1:70820490-70820893 (+) // 30.17 // p31.1"]
["11756855_a_at",0.1555214,0.42939854,0.28255653,-0.18442678,-0.15552092,-0.18442678,0.0056884657,0.004339527,1.3793135,0.46395034,1.3793135,"up","GCNT2",2651,"0006024 // glycosaminoglycan biosynthetic process // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008109 // N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase activity // inferred from electronic annotation /// 0008109 // N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase activity // traceable author statement /// 0008375 // acetylglucosaminyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr6:10509317-10627455 (+) // 77.47 // p24.3"]
["11736038_x_at",0.16875935,0.25916147,0.2057662,-0.18285656,-0.23735857,-0.16875935,0.0012006324,0.0002637048,1.3264349,0.40755385,1.3264349,"up","TADA3",10474,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0030520 // intracellular estrogen receptor signaling pathway // traceable author statement /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay","0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005671 // Ada2/Gcn5/Ada3 transcription activator complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0030914 // STAGA complex // inferred from direct assay /// 0030914 // STAGA complex // inferred from electronic annotation /// 0033276 // transcription factor TFTC complex // inferred from direct assay","0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0004402 // histone acetyltransferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016922 // ligand-dependent nuclear receptor binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from electronic annotation","chr3:9824812-9834420 (-) // 67.14 // p25.3"]
["11723804_a_at",0.45361233,0.49796104,0.5233698,-0.5353627,-0.45361185,-0.64658403,0.0007292708,6.375623e-5,2.0517201,1.036834,2.0517201,"up","AKAP12",9590,"0006605 // protein targeting // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0010739 // positive regulation of protein kinase A signaling cascade // inferred from mutant phenotype /// 0030819 // positive regulation of cAMP biosynthetic process // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005938 // cell cortex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008179 // adenylate cyclase binding // inferred from physical interaction /// 0051018 // protein kinase A binding // traceable author statement","chr6:151561133-151679671 (+) // 97.17 // q25.1"]
["11717281_a_at",0.3958516,0.24624395,0.41747665,-0.30598068,-0.24624348,-0.29082298,0.0013318703,0.0003648017,1.5520838,0.6342065,1.5520838,"up","ASAP1",50807,"0007165 // signal transduction // inferred from electronic annotation /// 0030030 // cell projection organization // inferred from electronic annotation /// 0032312 // regulation of ARF GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0046847 // filopodium assembly // inferred from electronic annotation /// 0060271 // cilium morphogenesis // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008060 // ARF GTPase activator activity // inferred from electronic annotation /// 0008093 // cytoskeletal adaptor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:131064352-131456099 (-) // 98.96 // q24.21"]
["11745949_x_at",0.20115566,0.2710476,0.26081085,-0.30591297,-0.28561687,-0.20115566,0.0010877973,0.00019520131,1.4226359,0.5085665,1.4226359,"up","CHEK1",1111,"0000075 // cell cycle checkpoint // traceable author statement /// 0000077 // DNA damage checkpoint // inferred from direct assay /// 0000077 // DNA damage checkpoint // inferred from mutant phenotype /// 0000077 // DNA damage checkpoint // inferred from electronic annotation /// 0000086 // G2/M transition of mitotic cell cycle // inferred from electronic annotation /// 0006260 // DNA replication // traceable author statement /// 0006281 // DNA repair // inferred from mutant phenotype /// 0006281 // DNA repair // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from mutant phenotype /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0006975 // DNA damage induced protein phosphorylation // inferred from direct assay /// 0006975 // DNA damage induced protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0010569 // regulation of double-strand break repair via homologous recombination // inferred from direct assay /// 0010767 // regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage // inferred from sequence or structural similarity /// 0010767 // regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018107 // peptidyl-threonine phosphorylation // inferred from direct assay /// 0031572 // G2/M transition DNA damage checkpoint // inferred from mutant phenotype /// 0031572 // G2/M transition DNA damage checkpoint // inferred from electronic annotation /// 0033261 // regulation of S phase // inferred from electronic annotation /// 0035407 // histone H3-T11 phosphorylation // inferred from direct assay /// 0035407 // histone H3-T11 phosphorylation // inferred from electronic annotation /// 0045839 // negative regulation of mitosis // inferred from direct assay /// 0046602 // regulation of mitotic centrosome separation // inferred from direct assay /// 0048096 // chromatin-mediated maintenance of transcription // inferred from sequence or structural similarity /// 0048096 // chromatin-mediated maintenance of transcription // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern /// 0071310 // cellular response to organic substance // inferred from electronic annotation /// 0071313 // cellular response to caffeine // inferred from electronic annotation /// 0090399 // replicative senescence // non-traceable author statement /// 2000615 // regulation of histone H3-K9 acetylation // inferred from sequence or structural similarity /// 2000615 // regulation of histone H3-K9 acetylation // inferred from electronic annotation","0000781 // chromosome, telomeric region // inferred from direct assay /// 0000785 // chromatin // inferred from sequence or structural similarity /// 0000785 // chromatin // inferred from electronic annotation /// 0000794 // condensed nuclear chromosome // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005657 // replication fork // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0035402 // histone kinase activity (H3-T11 specific) // inferred from direct assay /// 0035402 // histone kinase activity (H3-T11 specific) // inferred from electronic annotation","chr11:125495620-125525629 (+) // 99.13 // q24.2"]
["11721893_a_at",0.28550053,0.2606516,0.1292181,-0.1292181,-0.17931747,-0.20135307,0.0028598784,0.0017272087,1.3150214,0.3950863,1.3150214,"up","CHEK2",11200,"0000075 // cell cycle checkpoint // traceable author statement /// 0000077 // DNA damage checkpoint // inferred from electronic annotation /// 0000077 // DNA damage checkpoint // traceable author statement /// 0000086 // G2/M transition of mitotic cell cycle // inferred from mutant phenotype /// 0006281 // DNA repair // inferred from electronic annotation /// 0006302 // double-strand break repair // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from mutant phenotype /// 0006974 // response to DNA damage stimulus // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0006975 // DNA damage induced protein phosphorylation // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0008630 // DNA damage response, signal transduction resulting in induction of apoptosis // inferred from direct assay /// 0008630 // DNA damage response, signal transduction resulting in induction of apoptosis // inferred from mutant phenotype /// 0010332 // response to gamma radiation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0042176 // regulation of protein catabolic process // inferred from mutant phenotype /// 0042770 // signal transduction in response to DNA damage // inferred from direct assay /// 0042770 // signal transduction in response to DNA damage // inferred from electronic annotation /// 0044257 // cellular protein catabolic process // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation /// 0072428 // signal transduction involved in intra-S DNA damage checkpoint // inferred from mutant phenotype /// 0090307 // spindle assembly involved in mitosis // inferred from mutant phenotype /// 0090399 // replicative senescence // non-traceable author statement","0000781 // chromosome, telomeric region // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0016605 // PML body // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr22:29083730-29137826 (-) // 92.09 // q12.1"]
["11719267_s_at",0.21420097,0.31900978,0.32492638,-0.21420097,-0.21800804,-0.33454037,0.0015242294,0.0005325158,1.455615,0.54162884,1.455615,"up","SERINC1",57515,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006658 // phosphatidylserine metabolic process // inferred from sequence or structural similarity /// 0006658 // phosphatidylserine metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // inferred from sequence or structural similarity /// 0006665 // sphingolipid metabolic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0015825 // L-serine transport // inferred from sequence or structural similarity /// 0015825 // L-serine transport // inferred from electronic annotation /// 0051347 // positive regulation of transferase activity // inferred from sequence or structural similarity /// 0051347 // positive regulation of transferase activity // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from sequence or structural similarity /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0015194 // L-serine transmembrane transporter activity // inferred from sequence or structural similarity /// 0015194 // L-serine transmembrane transporter activity // inferred from electronic annotation","chr6:122764150-122793051 (-) // 90.47 // q22.31"]
["11727990_at",0.1580658,0.24019432,0.20080757,-0.24768782,-0.20224524,-0.15806627,0.0012808557,0.00033041884,1.3216642,0.40235567,1.3216642,"up","FAXC",84553,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:99719044-99797818 (-) // 86.65 // q16.2"]
["11755028_a_at",0.56621027,0.4453206,0.5512538,-0.4453206,-0.5684128,-0.51018095,0.0006672249,3.870259e-5,2.0404675,1.0288997,2.0404675,"up","DENND1A",57706,"0048488 // synaptic vesicle endocytosis // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0030665 // clathrin coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation","chr9:126163536-126692419 (-) // 96.06 // q33.3"]
["11743402_at",0.27501392,0.1925335,0.21160507,-0.1925335,-0.2063036,-0.32566643,0.0016711045,0.00067578256,1.3830807,0.46788532,1.3830807,"up","CDC27",996,"0000075 // cell cycle checkpoint // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007091 // mitotic metaphase/anaphase transition // inferred from mutant phenotype /// 0007091 // mitotic metaphase/anaphase transition // traceable author statement /// 0007094 // mitotic cell cycle spindle assembly checkpoint // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005680 // anaphase-promoting complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // traceable author statement /// 0005819 // spindle // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005876 // spindle microtubule // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0019903 // protein phosphatase binding // inferred from physical interaction","chr17:45195068-45266663 (-) // 94.09 // q21.32"]
["11717916_s_at",0.88749456,0.54764175,0.4056139,-0.4056139,-0.47621298,-0.4774661,0.0029613448,0.0018150214,2.094609,1.066681,2.094609,"up","CKMT1A","1159 /// 548596","0006600 // creatine metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004111 // creatine kinase activity // inferred from electronic annotation /// 0004111 // creatine kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr15:43885054-43891601 (+) // 97.87 // q15.3 /// chr15:43984886-43991417 (+) // 97.82 // q15.3"]
["11739645_x_at",0.38439178,0.19311905,0.13253593,-0.13253593,-0.1732006,-0.15013695,0.008611683,0.007180111,1.3091588,0.38864008,1.3091588,"up","TULP3",7289,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0001843 // neural tube closure // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // non-traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008589 // regulation of smoothened signaling pathway // inferred from electronic annotation /// 0021904 // dorsal/ventral neural tube patterning // inferred from electronic annotation /// 0021914 // negative regulation of smoothened signaling pathway involved in ventral spinal cord patterning // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0021953 // central nervous system neuron differentiation // inferred from electronic annotation /// 0031076 // embryonic camera-type eye development // inferred from electronic annotation /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0045879 // negative regulation of smoothened signaling pathway // inferred from electronic annotation /// 0048702 // embryonic neurocranium morphogenesis // inferred from electronic annotation /// 0060173 // limb development // inferred from electronic annotation /// 0060434 // bronchus morphogenesis // inferred from electronic annotation /// 0060831 // smoothened signaling pathway involved in dorsal/ventral neural tube patterning // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // non-traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0035085 // cilium axoneme // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005546 // phosphatidylinositol-4,5-bisphosphate binding // non-traceable author statement","chr12:3000032-3050304 (+) // 98.72 // p13.33"]
["11725155_at",0.1499958,0.1323142,0.12794161,-0.12794161,-0.21426344,-0.40231228,0.010508507,0.009064832,1.3057901,0.38492298,1.3057901,"up","FJX1",24147,"","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement","","chr11:35639649-35642416 (+) // 92.9 // p13"]
["11750935_a_at",0.27977657,0.2080822,0.18455887,-0.26668406,-0.2062521,-0.18455887,0.0012361597,0.00030026503,1.359715,0.44330424,1.359715,"up","BMP6",654,"0001501 // skeletal system development // traceable author statement /// 0001503 // ossification // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001654 // eye development // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // inferred from electronic annotation /// 0001958 // endochondral ossification // inferred from electronic annotation /// 0003323 // type B pancreatic cell development // inferred from direct assay /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // inferred from mutant phenotype /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030501 // positive regulation of bone mineralization // inferred from direct assay /// 0030509 // BMP signaling pathway // inferred from direct assay /// 0030509 // BMP signaling pathway // inferred from electronic annotation /// 0030539 // male genitalia development // inferred from electronic annotation /// 0032349 // positive regulation of aldosterone biosynthetic process // inferred from direct assay /// 0040007 // growth // inferred from electronic annotation /// 0045603 // positive regulation of endothelial cell differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // non-traceable author statement /// 0050679 // positive regulation of epithelial cell proliferation // inferred from direct assay /// 0050714 // positive regulation of protein secretion // non-traceable author statement /// 0051216 // cartilage development // inferred from electronic annotation /// 0060395 // SMAD protein signal transduction // inferred from direct assay /// 2000105 // positive regulation of DNA-dependent DNA replication // non-traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0070700 // BMP receptor binding // inferred from physical interaction","chr6:7726331-7880740 (+) // 97.07 // p24.3"]
["11717916_s_at",0.88749456,0.54764175,0.4056139,-0.4056139,-0.47621298,-0.4774661,0.0029613448,0.0018150214,2.094609,1.066681,2.094609,"up","CKMT1B","1159 /// 548596","0006600 // creatine metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004111 // creatine kinase activity // inferred from electronic annotation /// 0004111 // creatine kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr15:43885054-43891601 (+) // 97.87 // q15.3 /// chr15:43984886-43991417 (+) // 97.82 // q15.3"]
["11722522_a_at",0.30287838,0.1784625,0.21237087,-0.18188429,-0.1784625,-0.20946646,0.0013662435,0.0003929404,1.3390176,0.421175,1.3390176,"up","SUSD1",64420,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr9:114802798-114937800 (-) // 93.06 // q31.3"]
["11720262_a_at",0.16071033,0.22295094,0.18596172,-0.19380283,-0.2262907,-0.16071033,0.0009366118,0.00012626672,1.3044807,0.38347563,1.3044807,"up","MITF",4286,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006461 // protein complex assembly // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030316 // osteoclast differentiation // inferred from electronic annotation /// 0030318 // melanocyte differentiation // non-traceable author statement /// 0030318 // melanocyte differentiation // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043010 // camera-type eye development // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043473 // pigmentation // inferred from electronic annotation /// 0045165 // cell fate commitment // inferred from electronic annotation /// 0045670 // regulation of osteoclast differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046849 // bone remodeling // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr3:69788585-70017487 (+) // 97.6 // p14.1"]
["11749363_a_at",0.19360065,0.18179607,0.19695663,-0.261981,-0.18179607,-0.3620186,0.0019375678,0.0009287308,1.3749536,0.459383,1.3749536,"up","COPS8",10920,"0010388 // cullin deneddylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008180 // signalosome // inferred from direct assay /// 0008180 // signalosome // inferred from electronic annotation","","chr2:237994528-238004527 (+) // 99.6 // q37.3"]
["11758563_at",0.4498062,0.4444208,0.3062234,-0.30622292,-0.416533,-0.4025979,0.0010771177,0.00018612259,1.711508,0.7752681,1.711508,"up","LOC100653153","100506290 /// 100653153 /// 151194","0032259 // methylation // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr2:208477464-208477880 (-) // 98.81 // q33.3"]
["11716287_at",0.48340988,0.3083725,0.25365448,-0.2597618,-0.25365448,-0.294096,0.0019407267,0.00093181274,1.5343735,0.6176497,1.5343735,"up","RABAC1",10567,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0070064 // proline-rich region binding // inferred from electronic annotation","chr19:42460834-42463540 (-) // 80.21 // q13.2"]
["11743537_a_at",0.30373764,0.24670362,0.38412952,-0.6036248,-0.24670362,-0.5967002,0.004395149,0.0030934683,1.7337146,0.79386646,1.7337146,"up","DNAJC18",202052,"0006457 // protein folding // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0031072 // heat shock protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr5:138747380-138780171 (-) // 86.77 // q31.2"]
["11755281_a_at",0.3382969,0.1703062,0.21272182,-0.1703062,-0.21583843,-0.19461346,0.0021648712,0.0011365107,1.351,0.43402767,1.351,"up","LOC100653157","100652886 /// 100653157 /// 7045","0001525 // angiogenesis // inferred from expression pattern /// 0002062 // chondrocyte differentiation // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007162 // negative regulation of cell adhesion // traceable author statement /// 0007601 // visual perception // inferred from electronic annotation /// 0007601 // visual perception // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity","0005178 // integrin binding // traceable author statement /// 0050840 // extracellular matrix binding // inferred from electronic annotation","chr5:135364675-135399097 (+) // 92.98 // q31.1"]
["11724150_a_at",0.29720688,0.2686062,0.28586578,-0.2686062,-0.3118124,-0.33385754,0.00047635857,9.436905e-6,1.5038406,0.58865166,1.5038406,"up","SWI5",375757,"0000724 // double-strand break repair via homologous recombination // inferred from mutant phenotype /// 0000724 // double-strand break repair via homologous recombination // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0032798 // Swi5-Sfr1 complex // inferred from direct assay /// 0032798 // Swi5-Sfr1 complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr9:131038424-131051268 (+) // 97.13 // q34.11"]
["11724786_s_at",0.51105404,0.42319107,0.4497614,-0.42319107,-0.5082836,-0.52934647,0.0005783946,2.192021e-5,1.9295654,0.9482759,1.9295654,"up","C14orf129",51527,"","0005737 // cytoplasm // inferred from electronic annotation","","chr14:96830716-96853623 (+) // 83.97 // q32.2"]
["11764167_at",0.3796358,0.29976225,0.50957394,-0.299762,-0.33392882,-0.39608788,0.0013662435,0.00039026284,1.6696938,0.7395836,1.6696938,"up","LINC00570",100874055,"","","","chr2:11534106-11542638 (+) // 73.37 // p25.1"]
["11749905_a_at",0.38687706,0.3321066,0.29677963,-0.29677963,-0.40985012,-0.5200796,0.0014103054,0.00042576404,1.6788704,0.7474909,1.6788704,"up","CYR61",3491,"0001558 // regulation of cell growth // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0002041 // intussusceptive angiogenesis // inferred from electronic annotation /// 0003181 // atrioventricular valve morphogenesis // inferred from electronic annotation /// 0003278 // apoptotic process involved in heart morphogenesis // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from electronic annotation /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0010518 // positive regulation of phospholipase activity // inferred from electronic annotation /// 0010811 // positive regulation of cell-substrate adhesion // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0030513 // positive regulation of BMP signaling pathway // inferred from genetic interaction /// 0033690 // positive regulation of osteoblast proliferation // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0044319 // wound healing, spreading of cells // inferred from direct assay /// 0045597 // positive regulation of cell differentiation // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // inferred from direct assay /// 0045860 // positive regulation of protein kinase activity // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0060413 // atrial septum morphogenesis // inferred from electronic annotation /// 0060591 // chondroblast differentiation // inferred from electronic annotation /// 0060710 // chorio-allantoic fusion // inferred from electronic annotation /// 0060716 // labyrinthine layer blood vessel development // inferred from electronic annotation /// 0061036 // positive regulation of cartilage development // inferred from electronic annotation /// 0070372 // regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0072593 // reactive oxygen species metabolic process // inferred from electronic annotation /// 2000304 // positive regulation of ceramide biosynthetic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0005178 // integrin binding // inferred from electronic annotation /// 0005520 // insulin-like growth factor binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from electronic annotation /// 0050840 // extracellular matrix binding // inferred from electronic annotation","chr1:86046443-86048763 (+) // 99.93 // p22.3"]
["11718258_at",0.16229057,0.19555092,0.16136074,-0.25936508,-0.16136074,-0.2778368,0.0014109603,0.00042848484,1.3249351,0.4059216,1.3249351,"up","ANKRD27",84079,"0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0045022 // early endosome to late endosome transport // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from direct assay /// 0005769 // early endosome // inferred from direct assay","0005085 // guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005096 // GTPase activator activity // inferred from electronic annotation","chr19:33087911-33166105 (-) // 97.78 // q13.11"]
["11759525_at",0.3642249,0.38815975,0.32103348,-0.32103348,-0.33025265,-0.52089167,0.0013662435,0.00038785784,1.6800824,0.748532,1.6800824,"up","GADD45B",4616,"0000185 // activation of MAPKKK activity // traceable author statement /// 0000186 // activation of MAPKK activity // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0006950 // response to stress // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","","chr19:2476123-2478256 (+) // 91.74 // p13.3"]
["11723517_a_at",0.25354767,0.4870119,0.32883024,-0.36923027,-0.36582422,-0.25354815,0.0019481388,0.0009492912,1.6088139,0.6859975,1.6088139,"up","CAB39L",81617,"0007050 // cell cycle arrest // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0046320 // regulation of fatty acid oxidation // traceable author statement","0005829 // cytosol // traceable author statement","","chr13:49882785-49975735 (-) // 99.35 // q14.2"]
["11752620_s_at",0.3076458,0.26148224,0.19768524,-0.29718494,-0.19768524,-0.30164433,0.0013309394,0.00036282715,1.4350581,0.5211092,1.4350581,"up","YPEL5",51646,"0055114 // oxidation-reduction process // inferred from electronic annotation","","0008113 // peptide-methionine-(S)-S-oxide reductase activity // inferred from electronic annotation","chr2:30370381-30382416 (+) // 92.44 // p23.1"]
["11761446_a_at",0.63688755,0.48768425,0.30784512,-0.42680836,-0.30784512,-0.44710064,0.0021605373,0.0011333051,1.8294251,0.87139034,1.8294251,"up","STAU2",27067,"0006810 // transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // traceable author statement","chr8:74333446-74659075 (-) // 96.92 // q21.11"]
["11754294_s_at",0.5847988,0.11359501,0.17202091,-0.11359501,-0.17215157,-0.15475559,0.04415295,0.042955,1.3537604,0.43697232,1.3537604,"up","STK40",83931,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr1:36805228-36811194 (-) // 90.61 // p34.3"]
["11749150_a_at",0.44956398,0.41070938,0.40392876,-0.40392876,-0.48967934,-0.52752304,0.0005783946,2.1851893e-5,1.8597531,0.8951111,1.8597531,"up","ABCD3",5825,"0006200 // ATP catabolic process // inferred from direct assay /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006635 // fatty acid beta-oxidation // inferred from genetic interaction /// 0006810 // transport // inferred from electronic annotation /// 0007031 // peroxisome organization // inferred from direct assay /// 0042221 // response to chemical stimulus // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042760 // very long-chain fatty acid catabolic process // inferred from genetic interaction /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation /// 0005778 // peroxisomal membrane // inferred from direct assay /// 0005778 // peroxisomal membrane // traceable author statement /// 0005778 // peroxisomal membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043621 // protein self-association // inferred from electronic annotation","chr1:94883968-94982836 (+) // 98.59 // p21.3"]
["11721611_a_at",0.17451477,0.23298407,0.29504395,-0.17451477,-0.27208567,-0.27976894,0.0016042459,0.00060591026,1.3911752,0.47630405,1.3911752,"up","IPO11",51194,"0006610 // ribosomal protein import into nucleus // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0008565 // protein transporter activity // inferred from electronic annotation","chr5:61714710-61924409 (+) // 94.17 // q12.1"]
["11720421_at",0.24672794,0.35461426,0.25774574,-0.40746737,-0.43223,-0.24672794,0.0016444417,0.0006560117,1.5675423,0.6485044,1.5675423,"up","AFF4",27125,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007286 // spermatid development // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay","0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr5:132211075-132299354 (-) // 98.62 // q31.1"]
["11727732_a_at",0.33569813,0.3740754,0.36076498,-0.5530305,-0.54713106,-0.33569765,0.0012713709,0.0003214017,1.7844332,0.8354659,1.7844332,"up","LCN10","158062 /// 414332","0006810 // transport // inferred from electronic annotation /// 0007338 // single fertilization // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","","chr9:139632618-139637411 (-) // 60.86 // q34.3"]
["11720458_at",0.24624443,0.28931046,0.32613564,-0.24624443,-0.25395775,-0.25165367,0.0005783946,2.0512402e-5,1.4518061,0.5378488,1.4518061,"up","CAPRIN1",4076,"0017148 // negative regulation of translation // inferred from sequence or structural similarity /// 0017148 // negative regulation of translation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0050775 // positive regulation of dendrite morphogenesis // inferred from sequence or structural similarity /// 0050775 // positive regulation of dendrite morphogenesis // inferred from electronic annotation /// 0061003 // positive regulation of dendritic spine morphogenesis // inferred from sequence or structural similarity /// 0061003 // positive regulation of dendritic spine morphogenesis // inferred from electronic annotation","0000932 // cytoplasmic mRNA processing body // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0010494 // cytoplasmic stress granule // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0003723 // RNA binding // inferred from sequence or structural similarity /// 0003723 // RNA binding // inferred from electronic annotation","chr11:34073158-34125059 (+) // 88.14 // p13"]
["11750654_s_at",0.31811333,0.21969223,0.28416824,-0.21969223,-0.29702282,-0.5175085,0.0039895363,0.0027335712,1.5355254,0.61873245,1.5355254,"up","ITPR1",3708,"0001666 // response to hypoxia // inferred from direct assay /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // non-traceable author statement /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048016 // inositol phosphate-mediated signaling // inferred from sequence or structural similarity /// 0048016 // inositol phosphate-mediated signaling // traceable author statement /// 0048016 // inositol phosphate-mediated signaling // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // traceable author statement /// 0050882 // voluntary musculoskeletal movement // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // traceable author statement /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0005635 // nuclear envelope // inferred from electronic annotation /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // non-traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005955 // calcineurin complex // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016529 // sarcoplasmic reticulum // inferred from electronic annotation /// 0030667 // secretory granule membrane // inferred from electronic annotation /// 0031088 // platelet dense granule membrane // inferred from direct assay /// 0031094 // platelet dense tubular network // inferred from direct assay /// 0031095 // platelet dense tubular network membrane // traceable author statement /// 0043234 // protein complex // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005218 // intracellular ligand-gated calcium channel activity // inferred from sequence or structural similarity /// 0005218 // intracellular ligand-gated calcium channel activity // inferred from electronic annotation /// 0005220 // inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity // inferred from sequence or structural similarity /// 0005220 // inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity // traceable author statement /// 0005220 // inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015085 // calcium ion transmembrane transporter activity // traceable author statement /// 0035091 // phosphatidylinositol binding // inferred from sequence or structural similarity /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr3:4535233-4888394 (+) // 99.96 // p26.1"]
["11749792_a_at",0.47265387,0.28529978,0.15139341,-0.15139294,-0.22846985,-0.1994009,0.008041076,0.006617785,1.410497,0.4962036,1.410497,"up","PBX1",5087,"0000080 // G1 phase of mitotic cell cycle // inferred from direct assay /// 0001655 // urogenital system development // inferred from electronic annotation /// 0001658 // branching involved in ureteric bud morphogenesis // inferred from electronic annotation /// 0001779 // natural killer cell differentiation // inferred from electronic annotation /// 0002326 // B cell lineage commitment // inferred from direct assay /// 0002326 // B cell lineage commitment // non-traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007548 // sex differentiation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0009954 // proximal/distal pattern formation // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0030098 // lymphocyte differentiation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030183 // B cell differentiation // non-traceable author statement /// 0030278 // regulation of ossification // inferred from electronic annotation /// 0030325 // adrenal gland development // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030890 // positive regulation of B cell proliferation // inferred from mutant phenotype /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0033152 // immunoglobulin V(D)J recombination // inferred from direct assay /// 0033152 // immunoglobulin V(D)J recombination // inferred from electronic annotation /// 0035162 // embryonic hemopoiesis // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042692 // muscle cell differentiation // traceable author statement /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0043966 // histone H3 acetylation // inferred from electronic annotation /// 0043967 // histone H4 acetylation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from sequence or structural similarity /// 0045787 // positive regulation of cell cycle // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0048468 // cell development // inferred from electronic annotation /// 0048536 // spleen development // inferred from electronic annotation /// 0048538 // thymus development // inferred from electronic annotation /// 0048541 // Peyer's patch development // inferred from electronic annotation /// 0048568 // embryonic organ development // inferred from electronic annotation /// 0048706 // embryonic skeletal system development // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051149 // positive regulation of muscle cell differentiation // traceable author statement","0000788 // nuclear nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0031435 // mitogen-activated protein kinase kinase kinase binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043425 // bHLH transcription factor binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0046982 // protein heterodimerization activity // non-traceable author statement /// 0070491 // repressing transcription factor binding // inferred from physical interaction /// 0070644 // vitamin D response element binding // inferred from direct assay /// 0070888 // E-box binding // inferred from direct assay /// 0070888 // E-box binding // inferred from sequence or structural similarity","chr1:164669698-164854300 (+) // 84.24 // q23.3"]
["11739507_a_at",0.2726097,0.26227188,0.2769122,-0.26227188,-0.3230176,-0.39306116,0.0008566264,9.642823e-5,1.512269,0.59671485,1.512269,"up","PBX3",5090,"0002087 // regulation of respiratory gaseous exchange by neurological system process // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007387 // anterior compartment pattern formation // traceable author statement /// 0007388 // posterior compartment specification // traceable author statement /// 0007585 // respiratory gaseous exchange // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0021516 // dorsal spinal cord development // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr9:128509616-128729656 (+) // 95.5 // q33.3"]
["11725074_a_at",0.20010567,0.30063057,0.23440456,-0.28096104,-0.31608582,-0.20010567,0.0013107243,0.00035167224,1.4248049,0.5107644,1.4248049,"up","FAM126A",84668,"0007165 // signal transduction // non-traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004871 // signal transducer activity // non-traceable author statement","chr7:22980877-23053814 (-) // 97.3 // p15.3"]
["11754288_a_at",0.29785156,0.3025751,0.2861805,-0.3630514,-0.29930878,-0.2861805,0.0005467525,1.4627974e-5,1.5280756,0.6117159,1.5280756,"up","LMAN2L",81562,"0006457 // protein folding // non-traceable author statement /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0015031 // protein transport // inferred from mutant phenotype","0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030134 // ER to Golgi transport vesicle // non-traceable author statement","0005537 // mannose binding // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:97371665-97405809 (-) // 95.48 // q11.2"]
["11754057_x_at",0.20356512,0.18200016,0.13485193,-0.3359275,-0.3423996,-0.13485241,0.004642051,0.0033346,1.3608729,0.44453225,1.3608729,"up","CRABP2",1382,"0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0008544 // epidermis development // traceable author statement /// 0035115 // embryonic forelimb morphogenesis // inferred from electronic annotation /// 0042573 // retinoic acid metabolic process // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation","0001972 // retinoic acid binding // inferred from electronic annotation /// 0005215 // transporter activity // inferred from electronic annotation /// 0005501 // retinoid binding // traceable author statement /// 0008289 // lipid binding // inferred from electronic annotation /// 0016918 // retinal binding // inferred from electronic annotation /// 0019841 // retinol binding // inferred from electronic annotation","chr1:156669807-156675375 (-) // 77.15 // q23.1"]
["11732376_a_at",0.32131338,0.2639246,0.2164793,-0.21647882,-0.22772074,-0.34453058,0.0014677041,0.0004813213,1.4440784,0.5301491,1.4440784,"up","TBC1D19",55296,"0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation","chr4:26585345-26756973 (+) // 98.25 // p15.2"]
["11739747_a_at",0.22980785,0.21300936,0.18735933,-0.22599173,-0.18735886,-0.19247341,0.0005527764,1.8414587e-5,1.3305292,0.41200018,1.3305292,"up","KLHL7",55975,"0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0031463 // Cul3-RING ubiquitin ligase complex // inferred from direct assay","0042803 // protein homodimerization activity // inferred from direct assay","chr7:23145352-23215040 (+) // 98.53 // p15.3"]
["11756328_s_at",0.24311256,0.32668114,0.3911171,-0.24311209,-0.62571526,-0.5302148,0.0043397443,0.0030408115,1.7250652,0.78665096,1.7250652,"up","TARDBP",23435,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from direct assay /// 0008380 // RNA splicing // inferred from electronic annotation /// 0043922 // negative regulation by host of viral transcription // inferred from direct assay /// 0070935 // 3'-UTR-mediated mRNA stabilization // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr1:11085096-11085548 (+) // 98.69 // p36.22"]
["11754223_at",0.24571419,0.39079762,0.292387,-0.24571419,-0.38251877,-0.30504608,0.0014257262,0.00044024363,1.5376487,0.6207259,1.5376487,"up","ZMYM6NB","100506144 /// 9204","0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0007275 // multicellular organismal development // traceable author statement /// 0022604 // regulation of cell morphogenesis // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:35447130-35450947 (-) // 70.54 // p34.3"]
["11728201_at",0.18146038,0.21782684,0.1933403,-0.18146038,-0.39646578,-0.28913593,0.0026042238,0.0015117389,1.4011031,0.4865632,1.4011031,"up","LOX",4015,"0001568 // blood vessel development // inferred from electronic annotation /// 0006464 // cellular protein modification process // traceable author statement /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0048251 // elastic fiber assembly // inferred from electronic annotation /// 0048545 // response to steroid hormone stimulus // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0004720 // protein-lysine 6-oxidase activity // inferred from electronic annotation /// 0004720 // protein-lysine 6-oxidase activity // traceable author statement /// 0005507 // copper ion binding // inferred from electronic annotation /// 0005507 // copper ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016641 // oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:121398889-121414206 (-) // 98.19 // q23.1"]
["11719924_a_at",0.18773317,0.16034698,0.56481266,-0.20628119,-0.16034698,-0.16090012,0.02299138,0.021684377,1.3948793,0.48014036,1.3948793,"up","RBM12",10137,"0006629 // lipid metabolic process // traceable author statement /// 0016192 // vesicle-mediated transport // traceable author statement","0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0001786 // phosphatidylserine binding // inferred from direct assay /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005215 // transporter activity // traceable author statement /// 0005544 // calcium-dependent phospholipid binding // traceable author statement","chr20:34236847-34252842 (-) // 98.6 // q11.22"]
["11727526_a_at",0.57582426,0.6588259,0.27076006,-0.32586908,-0.3201418,-0.27076006,0.0037018578,0.0024846059,1.750047,0.80739367,1.750047,"up","TNNT2",7139,"0006200 // ATP catabolic process // inferred from direct assay /// 0008016 // regulation of heart contraction // inferred from mutant phenotype /// 0030049 // muscle filament sliding // inferred from direct assay /// 0030049 // muscle filament sliding // traceable author statement /// 0032780 // negative regulation of ATPase activity // inferred from direct assay /// 0032781 // positive regulation of ATPase activity // inferred from direct assay /// 0051592 // response to calcium ion // inferred from direct assay /// 0051592 // response to calcium ion // inferred from mutant phenotype /// 0055010 // ventricular cardiac muscle tissue morphogenesis // inferred from mutant phenotype","0005829 // cytosol // traceable author statement /// 0005861 // troponin complex // inferred from direct assay /// 0005865 // striated muscle thin filament // inferred from direct assay /// 0030017 // sarcomere // traceable author statement","0003779 // actin binding // inferred from direct assay /// 0005523 // tropomyosin binding // inferred from direct assay /// 0016887 // ATPase activity // inferred from direct assay /// 0030172 // troponin C binding // inferred from physical interaction /// 0031013 // troponin I binding // inferred from physical interaction","chr1:201328136-201346890 (-) // 88.23 // q32.1"]
["11738247_a_at",0.26137066,0.26153946,0.24924421,-0.33904934,-0.24924421,-0.25168085,0.00070557836,5.5718752e-5,1.4513307,0.5373763,1.4513307,"up","TNNT1",7138,"0003009 // skeletal muscle contraction // inferred from mutant phenotype /// 0006937 // regulation of muscle contraction // inferred from electronic annotation /// 0030049 // muscle filament sliding // traceable author statement /// 0031444 // slow-twitch skeletal muscle fiber contraction // inferred from electronic annotation /// 0045932 // negative regulation of muscle contraction // inferred from direct assay","0005829 // cytosol // traceable author statement /// 0005861 // troponin complex // inferred from direct assay /// 0005861 // troponin complex // inferred from mutant phenotype /// 0005861 // troponin complex // inferred from electronic annotation","0005523 // tropomyosin binding // inferred from mutant phenotype /// 0031014 // troponin T binding // inferred from electronic annotation","chr19:55644161-55660606 (-) // 98.49 // q13.42"]
["11747966_a_at",0.1938076,0.28972578,0.36021614,-0.27685452,-0.1938076,-0.2254734,0.0016760693,0.00068151776,1.4273064,0.51329505,1.4273064,"up","SKIDA1",387640,"","0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation","chr10:21803944-21814611 (-) // 96.06 // p12.31"]
["11744833_at",0.35879135,0.46134663,0.33876324,-0.33876276,-0.46537876,-0.40441465,0.0008976833,0.00011592113,1.728059,0.7891525,1.728059,"up","TSHZ2",128553,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:52104711-52107602 (+) // 88.44 // q13.2"]
["11720993_at",0.2113204,0.35035276,0.30008602,-0.21892118,-0.28184724,-0.2113204,0.0013107243,0.00034832067,1.4385506,0.524616,1.4385506,"up","SOX2",6657,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0001649 // osteoblast differentiation // inferred from direct assay /// 0001654 // eye development // inferred from expression pattern /// 0001714 // endodermal cell fate specification // inferred from direct assay /// 0006325 // chromatin organization // non-traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0009611 // response to wounding // inferred from expression pattern /// 0010468 // regulation of gene expression // inferred from mutant phenotype /// 0021781 // glial cell fate commitment // non-traceable author statement /// 0021983 // pituitary gland development // inferred from expression pattern /// 0030900 // forebrain development // inferred from expression pattern /// 0035019 // somatic stem cell maintenance // inferred from direct assay /// 0035019 // somatic stem cell maintenance // inferred from mutant phenotype /// 0043281 // regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043410 // positive regulation of MAPK cascade // inferred from direct assay /// 0045665 // negative regulation of neuron differentiation // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048839 // inner ear development // inferred from expression pattern /// 0050680 // negative regulation of epithelial cell proliferation // inferred from direct assay /// 0070848 // response to growth factor stimulus // inferred from direct assay /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from direct assay /// 0097150 // neuronal stem cell maintenance // inferred from sequence or structural similarity","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0035198 // miRNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay","chr3:181429702-181432221 (+) // 95.04 // q26.33"]
["11716073_a_at",0.22988224,0.15008163,0.16070843,-0.15008163,-0.21436977,-0.2485466,0.0015485154,0.0005475156,1.3054587,0.38455677,1.3054587,"up","ATP6V1B2",526,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // traceable author statement /// 0015992 // proton transport // inferred from electronic annotation /// 0033572 // transferrin transport // traceable author statement /// 0046034 // ATP metabolic process // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005902 // microvillus // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016469 // proton-transporting two-sector ATPase complex // inferred from electronic annotation /// 0033178 // proton-transporting two-sector ATPase complex, catalytic domain // inferred from electronic annotation /// 0033180 // proton-transporting V-type ATPase, V1 domain // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005524 // ATP binding // inferred from electronic annotation /// 0015078 // hydrogen ion transmembrane transporter activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism // inferred from electronic annotation /// 0046961 // proton-transporting ATPase activity, rotational mechanism // inferred from electronic annotation /// 0046961 // proton-transporting ATPase activity, rotational mechanism // traceable author statement","chr8:20054560-20079207 (+) // 94.64 // p21.3"]
["11724748_at",0.22623634,0.13869,0.18109703,-0.25063515,-0.13869,-0.31982136,0.003205884,0.0020240422,1.3364353,0.41838998,1.3364353,"up","CHMP2B",25978,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0016197 // endosomal transport // traceable author statement","0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","0019904 // protein domain specific binding // inferred from physical interaction","chr3:87276412-87304697 (+) // 96.19 // p11.2"]
["11727263_a_at",0.1956625,0.23578978,0.28255177,-0.19566202,-0.40422297,-0.24142599,0.0027023053,0.001596711,1.4324039,0.51843834,1.4324039,"up","ENTPD7",57089,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0016787 // hydrolase activity // inferred from electronic annotation","chr10:101419133-101471002 (+) // 90.17 // q24.2"]
["11744737_a_at",0.41410923,0.23443604,0.27340698,-0.23443651,-0.35386133,-0.32618856,0.0017212598,0.00072661455,1.5285314,0.6121462,1.5285314,"up","RTKN2",219790,"0007165 // signal transduction // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation","chr10:63997910-64028622 (-) // 93.69 // q21.2"]
["11726320_at",0.2061534,0.16263771,0.2003479,-0.41259098,-0.16263771,-0.1779437,0.007187407,0.0057944986,1.357329,0.44077048,1.357329,"up","ERO1L",30001,"0006457 // protein folding // traceable author statement /// 0006457 // protein folding // inferred from electronic annotation /// 0006464 // cellular protein modification process // traceable author statement /// 0006467 // protein thiol-disulfide exchange // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0009266 // response to temperature stimulus // traceable author statement /// 0022900 // electron transport chain // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // inferred from electronic annotation /// 0050873 // brown fat cell differentiation // inferred from electronic annotation /// 0051085 // chaperone mediated protein folding requiring cofactor // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0016491 // oxidoreductase activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016671 // oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation","chr14:53108162-53162687 (-) // 77.92 // q22.1"]
["11723688_at",0.27605915,0.2530899,0.21478081,-0.21812773,-0.28522444,-0.21478128,0.00077045785,7.432496e-5,1.4018718,0.48735443,1.4018718,"up","CREBL2",1389,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from sequence or structural similarity /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from electronic annotation /// 0045600 // positive regulation of fat cell differentiation // inferred from sequence or structural similarity /// 0045600 // positive regulation of fat cell differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0046326 // positive regulation of glucose import // inferred from sequence or structural similarity /// 0046326 // positive regulation of glucose import // inferred from electronic annotation /// 0046889 // positive regulation of lipid biosynthetic process // inferred from sequence or structural similarity /// 0046889 // positive regulation of lipid biosynthetic process // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from sequence or structural similarity /// 0050821 // protein stabilization // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr12:12764766-12798131 (+) // 96.19 // p13.2"]
["11738986_a_at",0.17976665,0.28412247,0.2005024,-0.31540298,-0.3443222,-0.17976665,0.0021367685,0.0011162361,1.415483,0.50129443,1.415483,"up","GABARAPL1",23710,"","0005622 // intracellular // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005776 // autophagic vacuole // inferred from direct assay /// 0005776 // autophagic vacuole // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032590 // dendrite membrane // inferred from electronic annotation /// 0032839 // dendrite cytoplasm // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0048487 // beta-tubulin binding // inferred from sequence or structural similarity /// 0050811 // GABA receptor binding // inferred from sequence or structural similarity","chr12:10365107-10375731 (+) // 93.79 // p13.2"]
["11755281_a_at",0.3382969,0.1703062,0.21272182,-0.1703062,-0.21583843,-0.19461346,0.0021648712,0.0011365107,1.351,0.43402767,1.351,"up","LOC100652886","100652886 /// 100653157 /// 7045","0001525 // angiogenesis // inferred from expression pattern /// 0002062 // chondrocyte differentiation // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007162 // negative regulation of cell adhesion // traceable author statement /// 0007601 // visual perception // inferred from electronic annotation /// 0007601 // visual perception // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity","0005178 // integrin binding // traceable author statement /// 0050840 // extracellular matrix binding // inferred from electronic annotation","chr5:135364675-135399097 (+) // 92.98 // q31.1"]
["11753976_a_at",0.20370388,0.2615943,0.19458914,-0.19458914,-0.35772276,-0.2979493,0.0016301863,0.0006402799,1.4175335,0.50338286,1.4175335,"up","ZMYM3",9203,"0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0007275 // multicellular organismal development // traceable author statement /// 0022604 // regulation of cell morphogenesis // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:70469056-70474055 (-) // 91.51 // q13.1"]
["11754223_at",0.24571419,0.39079762,0.292387,-0.24571419,-0.38251877,-0.30504608,0.0014257262,0.00044024363,1.5376487,0.6207259,1.5376487,"up","ZMYM6","100506144 /// 9204","0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0007275 // multicellular organismal development // traceable author statement /// 0022604 // regulation of cell morphogenesis // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:35447130-35450947 (-) // 70.54 // p34.3"]
["11733239_x_at",0.2648449,0.28094006,0.28665638,-0.40263462,-0.2648449,-0.46358776,0.001350818,0.00037923772,1.5740734,0.65450287,1.5740734,"up","RPGRIP1L",23322,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008589 // regulation of smoothened signaling pathway // inferred from electronic annotation /// 0021532 // neural tube patterning // inferred from electronic annotation /// 0021537 // telencephalon development // inferred from electronic annotation /// 0021549 // cerebellum development // inferred from electronic annotation /// 0021670 // lateral ventricle development // inferred from electronic annotation /// 0021772 // olfactory bulb development // inferred from electronic annotation /// 0022038 // corpus callosum development // inferred from electronic annotation /// 0035108 // limb morphogenesis // inferred from electronic annotation /// 0035115 // embryonic forelimb morphogenesis // inferred from electronic annotation /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from electronic annotation /// 0043010 // camera-type eye development // inferred from electronic annotation /// 0043584 // nose development // inferred from electronic annotation /// 0045744 // negative regulation of G-protein coupled receptor protein signaling pathway // inferred from direct assay /// 0060039 // pericardium development // inferred from electronic annotation /// 0060322 // head development // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0005923 // tight junction // inferred from electronic annotation /// 0005929 // cilium // inferred from direct assay /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from direct assay /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0035085 // cilium axoneme // inferred from direct assay /// 0035085 // cilium axoneme // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0031870 // thromboxane A2 receptor binding // inferred from physical interaction","chr16:53633817-53737742 (-) // 96.81 // q12.2"]
["11751455_a_at",0.46157122,0.2787838,0.142344,-0.17435098,-0.14303637,-0.142344,0.010089653,0.008600233,1.3636532,0.44747677,1.3636532,"up","REEP1",65055,"0008219 // cell death // inferred from electronic annotation /// 0051205 // protein insertion into membrane // inferred from direct assay /// 0071786 // endoplasmic reticulum tubular network organization // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from direct assay /// 0031849 // olfactory receptor binding // inferred from mutant phenotype","chr2:86443503-86564749 (-) // 93.77 // p11.2"]
["11754241_a_at",0.19215298,0.23066616,0.28679943,-0.19215298,-0.27553654,-0.29052544,0.0012233602,0.00028594438,1.4037421,0.48927784,1.4037421,"up","ATAD1",84896,"0002092 // positive regulation of receptor internalization // inferred from sequence or structural similarity /// 0002092 // positive regulation of receptor internalization // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from sequence or structural similarity /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0007612 // learning // inferred from sequence or structural similarity /// 0007612 // learning // inferred from electronic annotation /// 0007613 // memory // inferred from sequence or structural similarity /// 0007613 // memory // inferred from electronic annotation /// 0051967 // negative regulation of synaptic transmission, glutamatergic // inferred from sequence or structural similarity /// 0051967 // negative regulation of synaptic transmission, glutamatergic // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005777 // peroxisome // inferred from electronic annotation /// 0005778 // peroxisomal membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from sequence or structural similarity /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from sequence or structural similarity /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr10:89512873-89574639 (-) // 93.11 // q23.31"]
["11735623_a_at",0.4099331,0.23481369,0.30624056,-0.23481369,-0.26865864,-0.34683323,0.0015865989,0.0005862627,1.5161694,0.60043097,1.5161694,"up","PSMB9",5698,"0000075 // cell cycle checkpoint // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from electronic annotation","0000502 // proteasome complex // traceable author statement /// 0000502 // proteasome complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005839 // proteasome core complex // inferred from electronic annotation","0004175 // endopeptidase activity // inferred from electronic annotation /// 0004298 // threonine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr6:32821937-32827628 (+) // 99.71 // p21.32"]
["11757004_a_at",0.12732792,0.17025328,0.17438412,-0.24433088,-0.3450818,-0.12732744,0.0049238633,0.003599627,1.316069,0.39623514,1.316069,"up","KCTD10",83892,"0016567 // protein ubiquitination // inferred from sequence or structural similarity /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0051260 // protein homooligomerization // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0031463 // Cul3-RING ubiquitin ligase complex // inferred from sequence or structural similarity","0004842 // ubiquitin-protein ligase activity // inferred from sequence or structural similarity /// 0005216 // ion channel activity // inferred from electronic annotation","chr12:109889208-109898611 (-) // 89.03 // q24.11"]
["11716179_at",0.6166811,0.35533142,0.40103245,-0.35533142,-0.5381355,-0.48563862,0.0017035499,0.00070264086,1.8886869,0.91738355,1.8886869,"up","C5orf15",56951,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr5:133291197-133304478 (-) // 96.25 // q31.1"]
["11745998_at",0.33857727,0.25392437,0.36558294,-0.27941656,-0.2539239,-0.26454782,0.0007449905,7.026396e-5,1.5003762,0.5853243,1.5003762,"up","ZNF252P",286101,"","0005622 // intracellular // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation","chr8:146198974-146225155 (-) // 86.83 // q24.3"]
["11743151_a_at",0.57539415,0.26514435,0.26281023,-0.3179865,-0.37045622,-0.2628107,0.0045107757,0.0032061748,1.6075542,0.6848674,1.6075542,"up","GLS",2744,"0002087 // regulation of respiratory gaseous exchange by neurological system process // inferred from electronic annotation /// 0006537 // glutamate biosynthetic process // inferred from direct assay /// 0006537 // glutamate biosynthetic process // traceable author statement /// 0006541 // glutamine metabolic process // inferred from electronic annotation /// 0006543 // glutamine catabolic process // inferred from direct assay /// 0006543 // glutamine catabolic process // non-traceable author statement /// 0006543 // glutamine catabolic process // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007269 // neurotransmitter secretion // traceable author statement /// 0007610 // behavior // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // traceable author statement /// 0014047 // glutamate secretion // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051289 // protein homotetramerization // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0004359 // glutaminase activity // inferred from direct assay /// 0004359 // glutaminase activity // non-traceable author statement /// 0004359 // glutaminase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr2:191745546-191830278 (+) // 96.04 // q32.2"]
["11722853_a_at",0.1650114,0.13534498,0.13775206,-0.13534498,-0.28934717,-0.34942245,0.004610877,0.0033042633,1.3232396,0.40407434,1.3232396,"up","HABP4",22927,"0002576 // platelet degranulation // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0043392 // negative regulation of DNA binding // inferred from direct assay /// 0071260 // cellular response to mechanical stimulus // inferred from sequence or structural similarity","0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0030017 // sarcomere // inferred from sequence or structural similarity","0005515 // protein binding // inferred from physical interaction","chr9:99212413-99253618 (+) // 87.69 // q22.32"]
["11745608_a_at",0.20246887,0.40170097,0.30588055,-0.20246887,-0.2050848,-0.2050848,0.0019180408,0.00091111066,1.4216467,0.50756294,1.4216467,"up","WDR1",9948,"0002576 // platelet degranulation // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007605 // sensory perception of sound // traceable author statement /// 0030168 // platelet activation // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation","chr4:10075962-10100761 (-) // 66.45 // p16.1"]
["11725877_a_at",0.4439535,0.27532196,0.24494839,-0.3017063,-0.36667728,-0.24494839,0.0019320704,0.00092334545,1.5431218,0.6258519,1.5431218,"up","SCARA3",51435,"0006979 // response to oxidative stress // traceable author statement /// 0009650 // UV protection // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005044 // scavenger receptor activity // traceable author statement","chr8:27491384-27517058 (+) // 83.39 // p21.1"]
["11718878_a_at",0.15945292,0.15945292,0.18251848,-0.15945292,-0.28409815,-0.38246918,0.0036513812,0.002431109,1.3589398,0.44248152,1.3589398,"up","SMC1A",8243,"0000070 // mitotic sister chromatid segregation // traceable author statement /// 0000075 // cell cycle checkpoint // inferred from direct assay /// 0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007052 // mitotic spindle organization // traceable author statement /// 0007062 // sister chromatid cohesion // inferred from mutant phenotype /// 0007062 // sister chromatid cohesion // inferred from electronic annotation /// 0007064 // mitotic sister chromatid cohesion // traceable author statement /// 0007067 // mitosis // inferred from electronic annotation /// 0007091 // mitotic metaphase/anaphase transition // traceable author statement /// 0007126 // meiosis // inferred from sequence or structural similarity /// 0007126 // meiosis // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0009314 // response to radiation // inferred from expression pattern /// 0010467 // gene expression // traceable author statement /// 0030261 // chromosome condensation // inferred from electronic annotation /// 0032876 // negative regulation of DNA endoreduplication // inferred from mutant phenotype /// 0042770 // signal transduction in response to DNA damage // inferred from direct assay /// 0051276 // chromosome organization // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0000794 // condensed nuclear chromosome // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0008280 // cohesin core heterodimer // traceable author statement /// 0030893 // meiotic cohesin complex // inferred from direct assay /// 0030893 // meiotic cohesin complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0003777 // microtubule motor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from physical interaction","chrX:53401069-53449677 (-) // 72.9 // p11.22"]
["11739305_a_at",0.37839317,0.3139,0.30292988,-0.30292988,-0.47769547,-0.42056656,0.0010930966,0.00020572059,1.6610992,0.7321383,1.6610992,"up","WRB",7485,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr21:40752212-40769814 (+) // 99.43 // q22.2"]
["11738060_s_at",0.28587437,0.22888947,0.19921875,-0.24988079,-0.19921875,-0.43047953,0.0032469141,0.0020611333,1.4451178,0.5311872,1.4451178,"up","HIST4H4","121504 /// 554313 /// 8294 /// 8359 /// 8360 /// 8361 /// 8362 /// 8363 /// 8364 /// 8365 /// 8366 /// 8367 /// 8368 /// 8370","0000723 // telomere maintenance // traceable author statement /// 0006325 // chromatin organization // non-traceable author statement /// 0006334 // nucleosome assembly // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0045653 // negative regulation of megakaryocyte differentiation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement","0000786 // nucleosome // traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26285354-26285727 (-) // 99.47 // p22.2"]
["11738060_s_at",0.28587437,0.22888947,0.19921875,-0.24988079,-0.19921875,-0.43047953,0.0032469141,0.0020611333,1.4451178,0.5311872,1.4451178,"up","HIST2H4A","121504 /// 554313 /// 8294 /// 8359 /// 8360 /// 8361 /// 8362 /// 8363 /// 8364 /// 8365 /// 8366 /// 8367 /// 8368 /// 8370","0000723 // telomere maintenance // traceable author statement /// 0006325 // chromatin organization // non-traceable author statement /// 0006334 // nucleosome assembly // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0045653 // negative regulation of megakaryocyte differentiation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement","0000786 // nucleosome // traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26285354-26285727 (-) // 99.47 // p22.2"]
["11738060_s_at",0.28587437,0.22888947,0.19921875,-0.24988079,-0.19921875,-0.43047953,0.0032469141,0.0020611333,1.4451178,0.5311872,1.4451178,"up","HIST2H4B","121504 /// 554313 /// 8294 /// 8359 /// 8360 /// 8361 /// 8362 /// 8363 /// 8364 /// 8365 /// 8366 /// 8367 /// 8368 /// 8370","0000723 // telomere maintenance // traceable author statement /// 0006325 // chromatin organization // non-traceable author statement /// 0006334 // nucleosome assembly // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0045653 // negative regulation of megakaryocyte differentiation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement","0000786 // nucleosome // traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26285354-26285727 (-) // 99.47 // p22.2"]
["11733642_s_at",0.32876682,0.41815758,0.40505219,-0.4455142,-0.45995855,-0.32876778,0.00084399927,9.139398e-5,1.7355654,0.79540575,1.7355654,"up","NECAP2",55707,"0006810 // transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from sequence or structural similarity /// 0006897 // endocytosis // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005622 // intracellular // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005905 // coated pit // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0030125 // clathrin vesicle coat // inferred from sequence or structural similarity /// 0030665 // clathrin coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","","chr1:16767166-16786582 (+) // 96.04 // p36.13"]
["11743495_s_at",0.5253959,0.3771615,0.41847658,-0.5649519,-0.47726154,-0.3771615,0.001091852,0.00019854578,1.8835701,0.9134697,1.8835701,"up","SV2B",9899,"0006810 // transport // inferred from electronic annotation /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0001669 // acrosomal vesicle // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0022857 // transmembrane transporter activity // inferred from electronic annotation","chr15:91643544-91838650 (+) // 97.85 // q26.1"]
["11739191_at",0.23890448,0.1455164,0.18861914,-0.27894735,-0.47711372,-0.1455164,0.009432929,0.007966396,1.405944,0.49153915,1.405944,"up","AKT3",10000,"0000002 // mitochondrial genome maintenance // inferred from mutant phenotype /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype /// 0007165 // signal transduction // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr1:243663025-244006553 (-) // 99.05 // q43"]
["11752854_a_at",0.49179506,0.183146,0.35957718,-0.257133,-0.21519995,-0.183146,0.004920457,0.0035939254,1.4776785,0.56333244,1.4776785,"up","PIGA",5277,"0006501 // C-terminal protein lipidation // traceable author statement /// 0006506 // GPI anchor biosynthetic process // traceable author statement /// 0006506 // GPI anchor biosynthetic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009893 // positive regulation of metabolic process // traceable author statement /// 0016254 // preassembly of GPI anchor in ER membrane // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0000506 // glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008194 // UDP-glycosyltransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0017176 // phosphatidylinositol N-acetylglucosaminyltransferase activity // traceable author statement /// 0017176 // phosphatidylinositol N-acetylglucosaminyltransferase activity // inferred from electronic annotation","chrX:15339822-15350115 (-) // 98.53 // p22.2"]
["11747534_a_at",0.38579082,0.19629383,0.23342419,-0.20219421,-0.2352171,-0.19629383,0.0022685104,0.0012299977,1.397716,0.48307133,1.397716,"up","RSU1",6251,"0007165 // signal transduction // traceable author statement /// 0007265 // Ras protein signal transduction // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement","0005829 // cytosol // traceable author statement","","chr10:16634912-16859450 (-) // 98.42 // p13"]
["11734772_a_at",0.1614399,0.2592678,0.22867203,-0.50227976,-0.1614399,-0.4117093,0.0069828383,0.0055918377,1.4896116,0.5749362,1.4896116,"up","SYNRG",11276,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030121 // AP-1 adaptor complex // traceable author statement /// 0030130 // clathrin coat of trans-Golgi network vesicle // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr17:35877485-35969544 (-) // 99.86 // q12"]
["11732996_at",0.3208742,0.2909689,0.2876587,-0.2876587,-0.35377026,-0.37164307,0.0005783946,2.0937947e-5,1.5556576,0.6375246,1.5556576,"up","HSP90AA1",3320,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006457 // protein folding // inferred from electronic annotation /// 0006839 // mitochondrial transport // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // non-traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0042026 // protein refolding // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045040 // protein import into mitochondrial outer membrane // inferred from direct assay /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from sequence or structural similarity /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from electronic annotation /// 0046209 // nitric oxide metabolic process // traceable author statement /// 0050999 // regulation of nitric-oxide synthase activity // traceable author statement /// 0051131 // chaperone-mediated protein complex assembly // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0042470 // melanosome // inferred from electronic annotation","0000166 // nucleotide binding // traceable author statement /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // traceable author statement /// 0016887 // ATPase activity // inferred from direct assay /// 0030235 // nitric-oxide synthase regulator activity // inferred from direct assay /// 0030235 // nitric-oxide synthase regulator activity // inferred from electronic annotation /// 0030911 // TPR domain binding // inferred from direct assay /// 0030911 // TPR domain binding // traceable author statement /// 0030911 // TPR domain binding // inferred from sequence or structural similarity /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // traceable author statement /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr14:102547075-102606099 (-) // 80.64 // q32.31"]
["11724264_a_at",0.389884,0.29585648,0.21657753,-0.21657753,-0.33005142,-0.33896542,0.0017212598,0.0007279402,1.5114893,0.59597075,1.5114893,"up","RABL5",64792,"0007264 // small GTPase mediated signal transduction // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr7:100956647-100965093 (-) // 52.12 // q22.1"]
["11732998_at",0.29428387,0.41535473,0.25071573,-0.25071526,-0.26171112,-0.3739891,0.0016147236,0.00061703,1.5321844,0.6155899,1.5321844,"up","MCM6",4175,"0000075 // cell cycle checkpoint // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // non-traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0006268 // DNA unwinding involved in replication // inferred from electronic annotation /// 0006270 // DNA-dependent DNA replication initiation // inferred from electronic annotation /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0042555 // MCM complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003678 // DNA helicase activity // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0004003 // ATP-dependent DNA helicase activity // inferred from direct assay /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction","chr2:136597197-136634058 (-) // 97.91 // q21.3"]
["11743637_a_at",0.33053064,0.21860695,0.24544907,-0.35267067,-0.24586105,-0.21860695,0.0015242294,0.00053421536,1.4511954,0.53724176,1.4511954,"up","DIS3L2",129563,"0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from mutant phenotype /// 0007067 // mitosis // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation /// 0051306 // mitotic sister chromatid separation // inferred from mutant phenotype /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0004540 // ribonuclease activity // inferred from direct assay /// 0004540 // ribonuclease activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr2:232825954-233201907 (+) // 94.62 // q37.1"]
["11752351_a_at",0.45225048,0.25346756,0.36253643,-0.25346756,-0.2928486,-0.33774233,0.0014630664,0.00047807707,1.5700071,0.650771,1.5700071,"up","PPP1R15B",84919,"0006417 // regulation of translation // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0006983 // ER overload response // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation","0000164 // protein phosphatase type 1 complex // inferred from electronic annotation","0004722 // protein serine/threonine phosphatase activity // inferred from electronic annotation","chr1:204375079-204380945 (-) // 99.91 // q32.1"]
["11751269_a_at",0.32347298,0.24531174,0.2531929,-0.4473319,-0.24634457,-0.24531174,0.002252896,0.0012071527,1.502108,0.58698857,1.502108,"up","SUPT3H",8464,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006352 // transcription initiation, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0016578 // histone deubiquitination // inferred from direct assay /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0030914 // STAGA complex // inferred from direct assay /// 0033276 // transcription factor TFTC complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0004402 // histone acetyltransferase activity // inferred from direct assay","chr6:44797073-45345601 (-) // 99.79 // p21.1"]
["11745988_a_at",0.44468737,0.2769742,0.31116533,-0.2769742,-0.29211187,-0.29956627,0.0011783505,0.0002522385,1.551675,0.6338264,1.551675,"up","ADPGK",83440,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006096 // glycolysis // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0043843 // ADP-specific glucokinase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:73043635-73076073 (-) // 98.19 // q24.1"]
["11743252_a_at",0.16469765,0.25469875,0.24521446,-0.26119137,-0.16469765,-0.23219681,0.0013760548,0.00040036297,1.3574499,0.4408989,1.3574499,"up","CALD1",800,"0006928 // cellular component movement // traceable author statement /// 0006936 // muscle contraction // traceable author statement /// 0006936 // muscle contraction // inferred from electronic annotation /// 0032092 // positive regulation of protein binding // inferred from electronic annotation /// 0051017 // actin filament bundle assembly // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005884 // actin filament // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0030016 // myofibril // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0030478 // actin cap // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0003779 // actin binding // traceable author statement /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005516 // calmodulin binding // traceable author statement /// 0005523 // tropomyosin binding // traceable author statement /// 0017022 // myosin binding // inferred from electronic annotation","chr7:134463969-134655474 (+) // 78.98 // q33"]
["11739457_a_at",0.3683977,0.17339945,0.18169785,-0.17339945,-0.23413515,-0.22814083,0.0036513812,0.002430024,1.3689377,0.4530568,1.3689377,"up","SYNC",81493,"0045103 // intermediate filament-based process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005882 // intermediate filament // inferred from electronic annotation /// 0030018 // Z disc // inferred from electronic annotation /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation","chr1:33145381-33168368 (-) // 95.92 // p35.1"]
["11762355_at",0.2999544,0.23785734,0.22391224,-0.22391224,-0.36704493,-0.23568153,0.0014867174,0.0005043165,1.4433831,0.52945423,1.4433831,"up","LOC554207",554207,"","","","chr14:21576201-21584861 (+) // 83.02 // q11.2"]
["11762199_s_at",0.3530941,0.310524,0.16812515,-0.2586403,-0.19022655,-0.16812515,0.0025781633,0.0014844979,1.3975616,0.48291177,1.3975616,"up","LOC100287497",100287497,"","0016021 // integral to membrane // inferred from electronic annotation","","chr1:721319-722133 (+) // 26.88 // p36.33"]
["11740140_a_at",0.42544127,0.40267754,0.5575328,-0.40267754,-0.5522957,-0.7491574,0.0017525848,0.00075930246,2.0419214,1.0299274,2.0419214,"up","RASGRP3",25780,"0000165 // MAPK cascade // non-traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // inferred from electronic annotation /// 0032854 // positive regulation of Rap GTPase activity // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043087 // regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0032045 // guanyl-nucleotide exchange factor complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0004871 // signal transducer activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005088 // Ras guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0017016 // Ras GTPase binding // inferred from electronic annotation /// 0019900 // kinase binding // inferred from electronic annotation /// 0019992 // diacylglycerol binding // non-traceable author statement /// 0046582 // Rap GTPase activator activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:33738941-33789797 (+) // 95.32 // p22.3"]
["11753991_x_at",0.19392395,0.2223978,0.1347723,-0.1347723,-0.33272076,-0.25681305,0.0037700427,0.0025393397,1.3426967,0.42513338,1.3426967,"up","MYL6B",140465,"0006936 // muscle contraction // traceable author statement /// 0007519 // skeletal muscle tissue development // traceable author statement /// 0030049 // muscle filament sliding // traceable author statement","0005829 // cytosol // traceable author statement /// 0005859 // muscle myosin complex // traceable author statement /// 0016459 // myosin complex // traceable author statement /// 0016459 // myosin complex // inferred from electronic annotation /// 0016461 // unconventional myosin complex // traceable author statement","0003774 // motor activity // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008307 // structural constituent of muscle // traceable author statement","chr12:56546370-56551760 (+) // 79.02 // q13.2"]
["11735913_s_at",0.15690947,0.120844364,0.16007805,-0.37241125,-0.12084389,-0.32775068,0.0073021553,0.0059058773,1.3375683,0.4196126,1.3375683,"up","TNXB","7146 /// 7148","0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006641 // triglyceride metabolic process // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from sequence or structural similarity /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from sequence or structural similarity /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0032963 // collagen metabolic process // inferred from mutant phenotype /// 0043206 // fibril organization // inferred from electronic annotation /// 0043506 // regulation of JUN kinase activity // inferred from electronic annotation /// 0048251 // elastic fiber assembly // inferred from mutant phenotype","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005583 // fibrillar collagen // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005622 // intracellular // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity","0005102 // receptor binding // inferred from electronic annotation /// 0005178 // integrin binding // inferred from sequence or structural similarity /// 0005201 // extracellular matrix structural constituent // non-traceable author statement /// 0005518 // collagen binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from sequence or structural similarity /// 0008201 // heparin binding // inferred from electronic annotation","chr6:32008932-32013905 (-) // 99.33 // p21.33"]
["11735913_s_at",0.15690947,0.120844364,0.16007805,-0.37241125,-0.12084389,-0.32775068,0.0073021553,0.0059058773,1.3375683,0.4196126,1.3375683,"up","TNXA","7146 /// 7148","0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006641 // triglyceride metabolic process // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from sequence or structural similarity /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from sequence or structural similarity /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0032963 // collagen metabolic process // inferred from mutant phenotype /// 0043206 // fibril organization // inferred from electronic annotation /// 0043506 // regulation of JUN kinase activity // inferred from electronic annotation /// 0048251 // elastic fiber assembly // inferred from mutant phenotype","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005583 // fibrillar collagen // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005622 // intracellular // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity","0005102 // receptor binding // inferred from electronic annotation /// 0005178 // integrin binding // inferred from sequence or structural similarity /// 0005201 // extracellular matrix structural constituent // non-traceable author statement /// 0005518 // collagen binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from sequence or structural similarity /// 0008201 // heparin binding // inferred from electronic annotation","chr6:32008932-32013905 (-) // 99.33 // p21.33"]
["11718915_a_at",0.31004047,0.26306534,0.23295212,-0.23315048,-0.28574944,-0.23295212,0.00070557836,5.3281605e-5,1.433263,0.5193033,1.433263,"up","RGS19",10287,"0006914 // autophagy // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation /// 0038032 // termination of G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // not recorded","0005624 // membrane fraction // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // not recorded /// 0005794 // Golgi apparatus // traceable author statement /// 0005834 // heterotrimeric G-protein complex // traceable author statement /// 0005886 // plasma membrane // not recorded /// 0005903 // brush border // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0044445 // cytosolic part // inferred from electronic annotation","0001965 // G-protein alpha-subunit binding // inferred from electronic annotation /// 0005096 // GTPase activator activity // not recorded /// 0005515 // protein binding // inferred from physical interaction","chr20:62704533-62711198 (-) // 93.22 // q13.33"]
["11719193_a_at",0.27287912,0.22201633,0.29201365,-0.2538786,-0.25110626,-0.22201633,0.00061382685,2.661193e-5,1.4187661,0.50463676,1.4187661,"up","CBY1",25776,"0008104 // protein localization // inferred from mutant phenotype /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from direct assay /// 0042384 // cilium assembly // inferred from electronic annotation /// 0045444 // fat cell differentiation // inferred from sequence or structural similarity /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0055007 // cardiac muscle cell differentiation // inferred from sequence or structural similarity /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction","chr22:39052654-39069857 (+) // 87.78 // q13.1"]
["11750851_a_at",0.08931732,0.45383883,0.34726143,-0.09387922,-0.09559679,-0.08931732,0.0240617,0.022735301,1.3101546,0.38973698,1.3101546,"up","SLC6A6",6533,"0006520 // cellular amino acid metabolic process // traceable author statement /// 0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0006865 // amino acid transport // traceable author statement /// 0015734 // taurine transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005328 // neurotransmitter:sodium symporter activity // inferred from electronic annotation /// 0005368 // taurine transmembrane transporter activity // inferred from electronic annotation /// 0005369 // taurine:sodium symporter activity // inferred from electronic annotation /// 0005369 // taurine:sodium symporter activity // traceable author statement /// 0015293 // symporter activity // inferred from electronic annotation /// 0030977 // taurine binding // inferred from electronic annotation","chr3:14444075-14520409 (+) // 99.24 // p25.1"]
["11720853_a_at",0.1920662,0.26734495,0.34066772,-0.21640491,-0.24548054,-0.1920662,0.0014295598,0.00044332872,1.3992724,0.48467684,1.3992724,"up","NFIA",4774,"0006260 // DNA replication // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0019079 // viral genome replication // non-traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0030054 // cell junction // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from physical interaction","chr1:61547979-61928465 (+) // 93.57 // p31.3"]

{"sheet":"Diff Data(Down)","index":5,"n_rows":342,"n_cols":19,"rows_kept":342,"merged":[[0,1,0,3],[0,4,0,6],[0,7,0,8],[0,9,0,12],[0,13,0,18]]}
["Probe","KD","KD","KD","NC","NC","NC","P-value","P-value","Fold change","Fold change","Fold change","Fold change","Annotation","Annotation","Annotation","Annotation","Annotation","Annotation"]
["probeSet","G416-1_(PrimeView).CEL","G416-2_(PrimeView).CEL","G416-3_(PrimeView).CEL","G415-1_(PrimeView).CEL","G415-2_(PrimeView).CEL","G415-3_(PrimeView).CEL","Corrected p-value","P-value","Fold change","Log Fold change","Absolute Fold change","Regulation","Gene Symbol","Entrez Gene","Gene Ontology Biological Process","Gene Ontology Cellular Component","Gene Ontology Molecular Function","Alignments"]
["11718097_a_at",-0.11879635,-0.1821804,-0.15145588,0.44562244,0.20918751,0.11879635,0.015937602,0.014585446,-1.3274704,-0.40867966,1.3274704,"down","MEF2A",4205,"0000002 // mitochondrial genome maintenance // inferred from sequence or structural similarity /// 0000002 // mitochondrial genome maintenance // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000165 // MAPK cascade // inferred from direct assay /// 0000165 // MAPK cascade // inferred from electronic annotation /// 0001568 // blood vessel development // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001782 // B cell homeostasis // inferred from electronic annotation /// 0001947 // heart looping // inferred from electronic annotation /// 0001958 // endochondral ossification // inferred from electronic annotation /// 0001974 // blood vessel remodeling // inferred from electronic annotation /// 0002062 // chondrocyte differentiation // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002467 // germinal center formation // inferred from electronic annotation /// 0002634 // regulation of germinal center formation // inferred from electronic annotation /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0003138 // primary heart field specification // inferred from electronic annotation /// 0003139 // secondary heart field specification // inferred from electronic annotation /// 0003151 // outflow tract morphogenesis // inferred from electronic annotation /// 0003185 // sinoatrial valve morphogenesis // inferred from electronic annotation /// 0003211 // cardiac ventricle formation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006959 // humoral immune response // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007507 // heart development // inferred from expression pattern /// 0007507 // heart development // inferred from electronic annotation /// 0007517 // muscle organ development // non-traceable author statement /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0007521 // muscle cell fate determination // inferred from electronic annotation /// 0007611 // learning or memory // inferred from electronic annotation /// 0008063 // Toll signaling pathway // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0010694 // positive regulation of alkaline phosphatase activity // inferred from electronic annotation /// 0014033 // neural crest cell differentiation // inferred from electronic annotation /// 0014898 // cardiac muscle hypertrophy in response to stress // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0030220 // platelet formation // inferred from electronic annotation /// 0030224 // monocyte differentiation // inferred from electronic annotation /// 0030318 // melanocyte differentiation // inferred from electronic annotation /// 0030501 // positive regulation of bone mineralization // inferred from electronic annotation /// 0030890 // positive regulation of B cell proliferation // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035051 // cardiac cell differentiation // inferred from electronic annotation /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035690 // cellular response to drug // inferred from electronic annotation /// 0035914 // skeletal muscle cell differentiation // inferred from electronic annotation /// 0035984 // cellular response to trichostatin A // inferred from electronic annotation /// 0042100 // B cell proliferation // inferred from electronic annotation /// 0042692 // muscle cell differentiation // traceable author statement /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045165 // cell fate commitment // inferred from electronic annotation /// 0045652 // regulation of megakaryocyte differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048311 // mitochondrion distribution // inferred from sequence or structural similarity /// 0048311 // mitochondrion distribution // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation /// 0048703 // embryonic viscerocranium morphogenesis // inferred from electronic annotation /// 0048704 // embryonic skeletal system morphogenesis // inferred from electronic annotation /// 0048813 // dendrite morphogenesis // inferred from sequence or structural similarity /// 0050680 // negative regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050853 // B cell receptor signaling pathway // inferred from electronic annotation /// 0051145 // smooth muscle cell differentiation // inferred from electronic annotation /// 0051149 // positive regulation of muscle cell differentiation // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0055005 // ventricular cardiac myofibril development // inferred from sequence or structural similarity /// 0055005 // ventricular cardiac myofibril development // inferred from electronic annotation /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0055012 // ventricular cardiac muscle cell differentiation // inferred from electronic annotation /// 0060025 // regulation of synaptic activity // inferred from electronic annotation /// 0060045 // positive regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0060297 // regulation of sarcomere organization // inferred from electronic annotation /// 0060536 // cartilage morphogenesis // inferred from electronic annotation /// 0061333 // renal tubule morphogenesis // inferred from electronic annotation /// 0061337 // cardiac conduction // inferred from sequence or structural similarity /// 0061337 // cardiac conduction // inferred from electronic annotation /// 0070375 // ERK5 cascade // inferred from mutant phenotype /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation /// 0071277 // cellular response to calcium ion // inferred from direct assay /// 0071277 // cellular response to calcium ion // inferred from electronic annotation /// 0071498 // cellular response to fluid shear stress // inferred from electronic annotation /// 0071864 // positive regulation of cell proliferation in bone marrow // inferred from electronic annotation /// 0072102 // glomerulus morphogenesis // inferred from electronic annotation /// 0072160 // nephron tubule epithelial cell differentiation // inferred from electronic annotation /// 0090073 // positive regulation of protein homodimerization activity // inferred from electronic annotation /// 2000111 // positive regulation of macrophage apoptotic process // inferred from electronic annotation /// 2000727 // positive regulation of cardiac muscle cell differentiation // inferred from electronic annotation /// 2000987 // positive regulation of behavioral fear response // inferred from electronic annotation /// 2001013 // epithelial cell proliferation involved in renal tubule morphogenesis // inferred from electronic annotation","0000790 // nuclear chromatin // inferred from sequence or structural similarity /// 0000790 // nuclear chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from direct assay /// 0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0000987 // core promoter proximal region sequence-specific DNA binding // inferred from electronic annotation /// 0001046 // core promoter sequence-specific DNA binding // inferred from electronic annotation /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0001085 // RNA polymerase II transcription factor binding // inferred from physical interaction /// 0001105 // RNA polymerase II transcription coactivator activity // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0033613 // activating transcription factor binding // inferred from physical interaction /// 0033613 // activating transcription factor binding // inferred from electronic annotation /// 0035035 // histone acetyltransferase binding // inferred from physical interaction /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0042826 // histone deacetylase binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046332 // SMAD binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0046983 // protein dimerization activity // inferred from electronic annotation /// 0071837 // HMG box domain binding // inferred from electronic annotation","chr15:100105904-100256689 (+) // 95.34 // q26.3"]
["11759043_at",-0.19077921,-0.2764778,-0.27967453,0.19512415,0.20512247,0.19077921,0.0008942897,0.00011041798,-1.3622446,-0.4459858,1.3622446,"down","VKORC1L1",154807,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr7:65338253-65424545 (+) // 82.1 // q11.21"]
["11719476_at",-0.71326685,-0.4031391,-0.4664297,0.59003067,0.4031391,0.42827225,0.0018447193,0.0008437088,-2.001978,-1.001426,2.001978,"down","FAM210B",116151,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr20:54934013-54943719 (+) // 77.91 // q13.2"]
["11722479_a_at",-0.189785,-0.15629673,-0.17467213,0.2668743,0.32018566,0.15629673,0.0020261612,0.0010226791,-1.3391988,-0.4213702,1.3391988,"down","CUL5",8065,"0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006970 // response to osmotic stress // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051480 // cytosolic calcium ion homeostasis // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // traceable author statement","0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0031461 // cullin-RING ubiquitin ligase complex // inferred from electronic annotation /// 0031466 // Cul5-RING ubiquitin ligase complex // inferred from direct assay","0004872 // receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0005262 // calcium channel activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from direct assay /// 0031625 // ubiquitin protein ligase binding // inferred from electronic annotation","chr11:107879406-107978739 (+) // 97.76 // q22.3"]
["11727949_at",-0.18195915,-0.19709969,-0.22783661,0.38424015,0.40268326,0.18195915,0.0030210405,0.0018748145,-1.4391923,-0.5252593,1.4391923,"down","DHX33",56919,"0045943 // positive regulation of transcription from RNA polymerase I promoter // inferred from direct assay /// 0045943 // positive regulation of transcription from RNA polymerase I promoter // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000182 // rDNA binding // inferred from direct assay /// 0000182 // rDNA binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0033613 // activating transcription factor binding // inferred from electronic annotation","chr17:5345461-5372380 (-) // 88.99 // p13.2"]
["11759318_x_at",-0.3096285,-0.19052696,-0.23727417,0.19052696,0.24318886,0.2295618,0.0011812649,0.00025385493,-1.3821387,-0.4669024,1.3821387,"down","ISG20L2",81875,"0042254 // ribosome biogenesis // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation","chr1:156691675-156698227 (-) // 76.0 // q23.1"]
["11719591_s_at",-0.37611198,-0.43548584,-0.3994751,0.39750957,0.37611198,0.3819456,0.00031084043,1.7739021e-6,-1.7277327,-0.78888,1.7277327,"down","GLTP",51228,"0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0046836 // glycolipid transport // inferred from direct assay /// 0046836 // glycolipid transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred by curator","0008289 // lipid binding // inferred from direct assay /// 0017089 // glycolipid transporter activity // inferred from direct assay /// 0017089 // glycolipid transporter activity // inferred from electronic annotation /// 0051861 // glycolipid binding // inferred from direct assay /// 0051861 // glycolipid binding // inferred from electronic annotation","chr12:110288747-110318309 (-) // 68.35 // q24.11"]
["11750906_at",-0.5378809,-0.2914152,-0.4349947,0.2914152,0.34627914,0.34119225,0.0015215367,0.00052814756,-1.6791438,-0.7477258,1.6791438,"down","RAD1",5810,"0000075 // cell cycle checkpoint // non-traceable author statement /// 0000075 // cell cycle checkpoint // traceable author statement /// 0000077 // DNA damage checkpoint // inferred from mutant phenotype /// 0000077 // DNA damage checkpoint // traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006974 // response to DNA damage stimulus // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007128 // meiotic prophase I // traceable author statement /// 0071479 // cellular response to ionizing radiation // inferred from direct assay /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement","0003684 // damaged DNA binding // non-traceable author statement /// 0003684 // damaged DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // traceable author statement /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008408 // 3'-5' exonuclease activity // inferred from direct assay /// 0008408 // 3'-5' exonuclease activity // traceable author statement /// 0008853 // exodeoxyribonuclease III activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr5:34908295-34915733 (-) // 75.76 // p13.2"]
["11731061_at",-0.19905615,-0.1633048,-0.16293097,0.22745848,0.16293049,0.27393818,0.0012713709,0.0003213359,-1.3163469,-0.3965397,1.3163469,"down","ZNF516",9658,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr18:74071440-74207146 (-) // 97.62 // q23"]
["11716183_a_at",-0.21830654,-0.22143078,-0.1452589,0.19926357,0.23232555,0.1452589,0.0013797177,0.00040272367,-1.3079264,-0.38728142,1.3079264,"down","ALCAM",214,"0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from electronic annotation","0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0005102 // receptor binding // traceable author statement","chr3:105085712-105295746 (+) // 96.66 // q13.11"]
["11724015_at",-0.1398716,-0.2044034,-0.19591999,0.55942345,0.13987112,0.19977236,0.023705922,0.022378717,-1.3945059,-0.47975397,1.3945059,"down","FRA10AC1",118924,"","0005634 // nucleus // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr10:95428327-95462338 (-) // 79.45 // q23.33"]
["11757487_x_at",-0.26286793,-0.27002716,-0.17973709,0.3283701,0.17973709,0.23265266,0.0017505207,0.00075328216,-1.399066,-0.484464,1.399066,"down","ESRRA",2101,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0030278 // regulation of ossification // inferred from electronic annotation /// 0030522 // intracellular receptor mediated signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0045667 // regulation of osteoblast differentiation // inferred from electronic annotation /// 0045670 // regulation of osteoclast differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051216 // cartilage development // inferred from electronic annotation","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // traceable author statement /// 0005496 // steroid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:64083709-64084210 (+) // 96.77 // q13.1 /// chr13:21835994-21836496 (+) // 91.81 // q12.11 /// chr13:20133379-20133880 (-) // 91.16 // q12.11"]
["11715629_a_at",-0.13700676,-0.22053051,-0.20950699,0.31722927,0.2726984,0.13700676,0.0031878275,0.0020085236,-1.3484726,-0.4313262,1.3484726,"down","LAPTM4A",9741,"0006810 // transport // inferred from electronic annotation","0005794 // Golgi apparatus // inferred from direct assay /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:20232411-20251789 (-) // 97.78 // p24.1"]
["11759029_at",-0.3919487,-0.45144176,-0.285151,0.7651448,0.4253006,0.285151,0.0058352747,0.0044933124,-1.8251891,-0.868046,1.8251891,"down","BRI3BP",140707,"","0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:125478182-125514098 (+) // 79.73 // q24.31"]
["11717294_a_at",-0.21785545,-0.29126167,-0.30094242,0.34286022,0.21785545,0.27743912,0.0011765101,0.00025001014,-1.4634818,-0.5494048,1.4634818,"down","SRSF7",6432,"0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from direct assay /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0048025 // negative regulation of nuclear mRNA splicing, via spliceosome // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:38970740-38978636 (-) // 96.89 // p22.1"]
["11722351_at",-0.5421052,-0.41376066,-0.37093925,0.3995185,0.541482,0.37093925,0.0012233602,0.00028176705,-1.8398416,-0.8795816,1.8398416,"down","SRSF8",10929,"0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr11:94800040-94804231 (+) // 71.92 // q21"]
["11743269_a_at",-0.45076752,-0.33353806,-0.24528265,0.3487339,0.2621889,0.24528313,0.0017445587,0.0007438041,-1.5460619,-0.62859803,1.5460619,"down","SRSF1",6426,"0000395 // nuclear mRNA 5'-splice site recognition // inferred from direct assay /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006376 // mRNA splice site selection // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from physical interaction /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0050733 // RS domain binding // inferred from electronic annotation","chr17:56078235-56084707 (-) // 92.16 // q22"]
["11757141_s_at",-0.1699009,-0.22678757,-0.17999649,0.1699009,0.29947758,0.19419289,0.0016760693,0.0006815215,-1.3318381,-0.41341877,1.3318381,"down","SNORA25","100302240 /// 654320 /// 677792 /// 677805 /// 677822 /// 684959 /// 692063 /// 692072 /// 79101","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr11:93463682-93463812 (-) // 97.01 // q21"]
["11757141_s_at",-0.1699009,-0.22678757,-0.17999649,0.1699009,0.29947758,0.19419289,0.0016760693,0.0006815215,-1.3318381,-0.41341877,1.3318381,"down","TAF1D","100302240 /// 654320 /// 677792 /// 677805 /// 677822 /// 684959 /// 692063 /// 692072 /// 79101","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr11:93463682-93463812 (-) // 97.01 // q21"]
["11754085_a_at",-0.18918324,-0.18363762,-0.29081059,0.18363762,0.26697636,0.20084476,0.0015215367,0.0005270031,-1.3550662,-0.43836337,1.3550662,"down","PMVK",10654,"0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // inferred from direct assay /// 0006695 // cholesterol biosynthetic process // traceable author statement /// 0006695 // cholesterol biosynthetic process // inferred from electronic annotation /// 0008299 // isoprenoid biosynthetic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // inferred from direct assay /// 0016126 // sterol biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019287 // isopentenyl diphosphate biosynthetic process, mevalonate pathway // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0070723 // response to cholesterol // inferred from expression pattern","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004631 // phosphomevalonate kinase activity // inferred from direct assay /// 0004631 // phosphomevalonate kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr1:154897427-154909276 (-) // 86.41 // q21.3"]
["11717722_s_at",-0.20409584,-0.17448997,-0.1455679,0.3712597,0.45161247,0.1455679,0.007317322,0.0059212954,-1.4117956,-0.49753127,1.4117956,"down","ASAH1",427,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006672 // ceramide metabolic process // traceable author statement /// 0006687 // glycosphingolipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005764 // lysosome // inferred from electronic annotation /// 0043202 // lysosomal lumen // traceable author statement","0003824 // catalytic activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017040 // ceramidase activity // traceable author statement /// 0017040 // ceramidase activity // inferred from electronic annotation","chr8:17913807-17942453 (-) // 92.5 // p22"]
["11746371_a_at",-0.27153778,-0.48234177,-0.36530304,0.43983746,0.3852024,0.27153778,0.00171664,0.0007141577,-1.6685405,-0.7385867,1.6685405,"down","AASDHPPT",60496,"0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0009059 // macromolecule biosynthetic process // inferred from electronic annotation /// 0015939 // pantothenate metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000287 // magnesium ion binding // inferred from direct assay /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008897 // holo-[acyl-carrier-protein] synthase activity // inferred from direct assay /// 0008897 // holo-[acyl-carrier-protein] synthase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:105948291-105968538 (+) // 78.69 // q22.3"]
["11759092_at",-0.45109463,-0.3171959,-0.28975582,0.29392052,0.28975582,0.40089512,0.0013628498,0.00038338048,-1.603109,-0.68087256,1.603109,"down","USP12",219333,"0006464 // cellular protein modification process // non-traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0016579 // protein deubiquitination // inferred from direct assay","","0004197 // cysteine-type endopeptidase activity // inferred from mutant phenotype /// 0004221 // ubiquitin thiolesterase activity // inferred from direct assay /// 0004221 // ubiquitin thiolesterase activity // traceable author statement /// 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr13:27640292-27746029 (-) // 88.39 // q12.13"]
["11728793_s_at",-0.2516718,-0.3805647,-0.2538042,0.2873392,0.36790657,0.2516718,0.0013760548,0.00039997842,-1.5132525,-0.59765273,1.5132525,"down","EEF2K",29904,"0006414 // translational elongation // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0031952 // regulation of protein autophosphorylation // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay","0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004686 // elongation factor-2 kinase activity // inferred from direct assay /// 0004686 // elongation factor-2 kinase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from direct assay /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr16:22217441-22300053 (+) // 72.42 // p12.2"]
["11725395_at",-0.18734169,-0.29198837,-0.26784468,0.71520233,0.24468565,0.18734121,0.021989726,0.020644963,-1.5491405,-0.63146794,1.5491405,"down","TWISTNB",221830,"0006351 // transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay","0003899 // DNA-directed RNA polymerase activity // inferred from electronic annotation","chr7:19735084-19748710 (-) // 82.34 // p21.1"]
["11727905_a_at",-0.30259418,-0.19931316,-0.2842512,0.23756981,0.2998371,0.19931316,0.0012361597,0.00030132057,-1.4217091,-0.50762624,1.4217091,"down","IL13RA1",3597,"0007166 // cell surface receptor signaling pathway // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005898 // interleukin-13 receptor complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004896 // cytokine receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chrX:117861257-117928929 (+) // 91.26 // q24"]
["11733946_at",-0.55281925,-0.5038185,-0.44676495,0.44676495,0.5172472,0.5042696,0.0005464768,1.2239901e-5,-1.9869581,-0.9905615,1.9869581,"down","RAP2B",5912,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0031954 // positive regulation of protein autophosphorylation // inferred from electronic annotation /// 0032486 // Rap protein signal transduction // inferred from sequence or structural similarity /// 0032486 // Rap protein signal transduction // inferred from electronic annotation /// 0061097 // regulation of protein tyrosine kinase activity // inferred from sequence or structural similarity /// 0061097 // regulation of protein tyrosine kinase activity // inferred from electronic annotation","0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from sequence or structural similarity /// 0055038 // recycling endosome membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0005525 // GTP binding // traceable author statement /// 0019904 // protein domain specific binding // inferred from electronic annotation","chr3:152880014-152886977 (+) // 94.06 // q25.2"]
["11757141_s_at",-0.1699009,-0.22678757,-0.17999649,0.1699009,0.29947758,0.19419289,0.0016760693,0.0006815215,-1.3318381,-0.41341877,1.3318381,"down","SNORA32","100302240 /// 654320 /// 677792 /// 677805 /// 677822 /// 684959 /// 692063 /// 692072 /// 79101","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr11:93463682-93463812 (-) // 97.01 // q21"]
["11753434_a_at",-0.38970852,-0.4668541,-0.4977646,0.45662785,0.38970852,0.4519186,0.0005783946,2.1733033e-5,-1.8457332,-0.884194,1.8457332,"down","SLC3A2",6520,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006816 // calcium ion transport // non-traceable author statement /// 0006865 // amino acid transport // traceable author statement /// 0006865 // amino acid transport // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0015804 // neutral amino acid transport // inferred from electronic annotation /// 0015827 // tryptophan transport // inferred from sequence or structural similarity /// 0016049 // cell growth // non-traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0060356 // leucine import // inferred from sequence or structural similarity /// 0060356 // leucine import // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0005432 // calcium:sodium antiporter activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0015175 // neutral amino acid transmembrane transporter activity // inferred from sequence or structural similarity /// 0015175 // neutral amino acid transmembrane transporter activity // inferred from electronic annotation /// 0043169 // cation binding // inferred from electronic annotation","chr11:62648365-62652110 (+) // 100.0 // q12.3"]
["11743550_at",-0.2595291,-0.29797506,-0.21205044,0.22008038,0.21299458,0.21205044,0.0006943628,4.6367102e-5,-1.386608,-0.47156,1.386608,"down","BRWD1",54014,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0008360 // regulation of cell shape // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","","chr21:40668362-40685745 (-) // 87.91 // q22.2"]
["11757141_s_at",-0.1699009,-0.22678757,-0.17999649,0.1699009,0.29947758,0.19419289,0.0016760693,0.0006815215,-1.3318381,-0.41341877,1.3318381,"down","SNORA40","100302240 /// 654320 /// 677792 /// 677805 /// 677822 /// 684959 /// 692063 /// 692072 /// 79101","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr11:93463682-93463812 (-) // 97.01 // q21"]
["11727988_a_at",-0.34394264,-0.28330994,-0.19122314,0.21299934,0.28734112,0.19122314,0.001685117,0.00069015776,-1.4174978,-0.50334644,1.4174978,"down","SCML1",6322,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement","chrX:17755594-17773105 (+) // 97.33 // p22.13"]
["11734716_at",-0.36107063,-0.28455973,-0.31149054,0.30991983,0.4524274,0.28455973,0.0012361597,0.0003000335,-1.588879,-0.6680093,1.588879,"down","CBLL1",79872,"0007162 // negative regulation of cell adhesion // inferred from sequence or structural similarity /// 0007162 // negative regulation of cell adhesion // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from sequence or structural similarity /// 0016567 // protein ubiquitination // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from sequence or structural similarity /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0045807 // positive regulation of endocytosis // inferred from sequence or structural similarity /// 0045807 // positive regulation of endocytosis // inferred from electronic annotation","0000151 // ubiquitin ligase complex // inferred by curator /// 0005622 // intracellular // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from sequence or structural similarity /// 0004842 // ubiquitin-protein ligase activity // traceable author statement /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:107384228-107402111 (+) // 99.38 // q22.3"]
["11718566_s_at",-0.48317242,-0.29908037,-0.13743019,0.21122742,0.22395468,0.13743019,0.010089653,0.008596617,-1.4116982,-0.49743176,1.4116982,"down","KIAA1147",57189,"","","","chr7:141356342-141402195 (-) // 96.1 // q34"]
["11754753_a_at",-0.36856937,-0.3245659,-0.29478645,0.39483547,0.4761324,0.29478645,0.0011259156,0.0002233526,-1.6447769,-0.717892,1.6447769,"down","SCAF11",9169,"0000245 // spliceosomal complex assembly // inferred from direct assay /// 0000375 // RNA splicing, via transesterification reactions // inferred from direct assay /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from direct assay /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:46315192-46323748 (-) // 87.15 // q12"]
["11729711_at",-0.49337006,-0.54974794,-0.4334097,0.4551549,0.6253238,0.43341017,0.00096791046,0.00013614689,-1.9955765,-0.99680555,1.9955765,"down","MARS2",92935,"0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006418 // tRNA aminoacylation for protein translation // inferred from electronic annotation /// 0006431 // methionyl-tRNA aminoacylation // inferred from direct assay /// 0006431 // methionyl-tRNA aminoacylation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from direct assay /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004825 // methionine-tRNA ligase activity // inferred from direct assay /// 0004825 // methionine-tRNA ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation","chr2:198570027-198573114 (+) // 98.62 // q33.1"]
["11726139_at",-0.18028784,-0.18377113,-0.24310017,0.26731586,0.26377583,0.18028784,0.0011428653,0.0002310908,-1.3561463,-0.4395129,1.3561463,"down","MTMR9",66036,"0016311 // dephosphorylation // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0030234 // enzyme regulator activity // inferred from electronic annotation","chr8:11141999-11185655 (+) // 90.89 // p23.1"]
["11718841_s_at",-0.40160275,-0.36822224,-0.27721405,0.27721405,0.28001642,0.3894601,0.0011259156,0.00022286079,-1.5851029,-0.66457653,1.5851029,"down","IL8",3576,"0001525 // angiogenesis // traceable author statement /// 0002237 // response to molecule of bacterial origin // inferred from direct assay /// 0006928 // cellular component movement // traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0019722 // calcium-mediated signaling // traceable author statement /// 0030155 // regulation of cell adhesion // inferred from direct assay /// 0030593 // neutrophil chemotaxis // inferred from genetic interaction /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0031623 // receptor internalization // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0042119 // neutrophil activation // traceable author statement /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from expression pattern /// 0045091 // regulation of retroviral genome replication // inferred from direct assay /// 0045744 // negative regulation of G-protein coupled receptor protein signaling pathway // inferred from direct assay /// 0048566 // embryonic digestive tract development // inferred from expression pattern /// 0050930 // induction of positive chemotaxis // inferred from genetic interaction /// 0071222 // cellular response to lipopolysaccharide // inferred from direct assay /// 0071347 // cellular response to interleukin-1 // inferred from expression pattern /// 0071356 // cellular response to tumor necrosis factor // inferred from expression pattern /// 0090023 // positive regulation of neutrophil chemotaxis // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005622 // intracellular // inferred from direct assay","0005125 // cytokine activity // inferred from electronic annotation /// 0005153 // interleukin-8 receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008009 // chemokine activity // inferred from electronic annotation /// 0008009 // chemokine activity // traceable author statement","chr4:74606222-74609433 (+) // 67.34 // q13.3"]
["11741535_a_at",-0.4128914,-0.5428314,-0.47955036,0.48019695,0.6362333,0.4128914,0.001091852,0.00020235096,-1.9837061,-0.9881983,1.9837061,"down","TMEM2",23670,"0007275 // multicellular organismal development // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","","chr9:74298282-74383800 (-) // 98.24 // q21.13"]
["11717186_a_at",-0.21491909,-0.2658348,-0.20124912,0.2063694,0.20124912,0.22709084,0.0006217929,3.203251e-5,-1.3555743,-0.4389041,1.3555743,"down","MEF2D",4209,"0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001958 // endochondral ossification // inferred from electronic annotation /// 0002062 // chondrocyte differentiation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007512 // adult heart development // inferred from expression pattern /// 0007517 // muscle organ development // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from direct assay /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from electronic annotation /// 0033613 // activating transcription factor binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr1:156433518-156470529 (-) // 92.07 // q22"]
["11756203_x_at",-0.17360687,-0.19999504,-0.22470665,0.1805172,0.17360687,0.19075966,0.00055139343,1.6549151e-5,-1.3023021,-0.38106412,1.3023021,"down","KIAA1143",57456,"","","","chr14:32736471-32737355 (-) // 42.33 // q12 /// chr3:44790237-44791121 (-) // 42.89 // p21.31"]
["11717892_a_at",-0.45311546,-0.32944775,-0.44622612,0.37657166,0.4286251,0.32944775,0.00084399927,8.9642934e-5,-1.7264533,-0.7878113,1.7264533,"down","PTP4A1",7803,"0006470 // protein dephosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // non-traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009898 // internal side of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // non-traceable author statement /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr6:64281916-64293491 (+) // 94.31 // q12"]
["11718217_at",-0.23341084,-0.22374678,-0.40401363,0.28169203,0.24986601,0.2237463,0.0019051586,0.00090070756,-1.452789,-0.53882515,1.452789,"down","RAB22A",57403,"0006184 // GTP catabolic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from direct assay /// 0007032 // endosome organization // inferred from expression pattern /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation","chr20:56884751-56942563 (+) // 88.45 // q13.32"]
["11756581_s_at",-0.20183563,-0.23518276,-0.27251816,0.25412846,0.20558834,0.20183468,0.00073653937,6.5977685e-5,-1.3727124,-0.45702934,1.3727124,"down","PRSS23",11098,"0006508 // proteolysis // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr11:86511574-86519837 (+) // 96.59 // q14.2"]
["11730936_s_at",-0.28051996,-0.4154501,-0.29695702,0.28097343,0.28051996,0.3265047,0.0010000851,0.00015601984,-1.5443236,-0.62697506,1.5443236,"down","AKNA",80709,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr9:117094678-117160783 (-) // 80.05 // q32"]
["11736664_a_at",-0.2190299,-0.42790318,-0.33479452,0.23637629,0.28072214,0.2190299,0.0018126566,0.0008196768,-1.4872205,-0.5726186,1.4872205,"down","JDP2",122953,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr14:75898002-75939402 (+) // 74.95 // q24.3"]
["11719833_at",-0.381536,-0.26964474,-0.33188295,0.27205372,0.32996225,0.26964474,0.00081446936,8.266009e-5,-1.535003,-0.6182414,1.535003,"down","MPZL2",10205,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // traceable author statement /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation","0005856 // cytoskeleton // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr11:118124133-118135251 (-) // 97.94 // q23.3"]
["11718236_s_at",-0.125916,-0.13405323,-0.16112089,0.35588646,0.47762012,0.12591648,0.012723735,0.0113428645,-1.3757049,-0.46017104,1.3757049,"down","PRPF4B",8899,"0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr6:4021436-4065217 (+) // 97.83 // p25.2"]
["11722415_a_at",-0.2525363,-0.25023794,-0.18775606,0.37654734,0.21560144,0.18775606,0.0025138857,0.0014323302,-1.4045861,-0.49014503,1.4045861,"down","HBS1L",10767,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006414 // translational elongation // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement","","0000166 // nucleotide binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0005525 // GTP binding // traceable author statement","chr6:135281522-135376036 (-) // 81.08 // q23.3"]
["11726258_at",-0.21557188,-0.21847868,-0.2694502,0.7274828,0.41316938,0.2155714,0.0116416365,0.0102227805,-1.6094579,-0.68657476,1.6094579,"down","RNF141",50862,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","","0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:10533221-10562778 (-) // 89.14 // p15.4"]
["11754389_x_at",-0.85937977,-0.81813145,-0.86443186,0.93425846,0.8424969,0.81813145,0.00031084043,1.4930907e-6,-3.2767751,-1.7122767,3.2767751,"down","LRRC57",255252,"","","","chr15:42834721-42841000 (-) // 76.59 // q15.2"]
["11742720_at",-0.23068905,-0.20067215,-0.22309113,0.20067215,0.24909306,0.20720005,0.00055139343,1.5752716e-5,-1.3539169,-0.4371392,1.3539169,"down","LRRC58",116064,"","","","chr3:120043318-120068214 (-) // 81.65 // q13.33"]
["11759854_x_at",-0.14513111,-0.18584967,-0.15153933,0.31898403,0.3233409,0.14513111,0.0033264575,0.002133116,-1.341015,-0.4233254,1.341015,"down","RPS27A",6233,"0000075 // cell cycle checkpoint // traceable author statement /// 0000080 // G1 phase of mitotic cell cycle // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000187 // activation of MAPK activity // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006916 // anti-apoptosis // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007220 // Notch receptor processing // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0007254 // JNK cascade // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016044 // cellular membrane organization // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016197 // endosomal transport // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0046788 // egress of virus within host cell // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // traceable author statement /// 0015935 // small ribosomal subunit // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement","0003735 // structural constituent of ribosome // inferred from direct assay /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:55459771-55462745 (+) // 79.84 // p16.1"]
["11716230_s_at",-0.14239359,-0.16405344,-0.17347574,0.3577056,0.14239359,0.17530012,0.0060290927,0.0046892944,-1.305957,-0.38510737,1.305957,"down","TMEM167B",56900,"","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:109632424-109639556 (+) // 86.76 // p13.3"]
["11735447_a_at",-0.3542118,-0.24110079,-0.2684822,0.4214487,0.24110126,0.26267576,0.0018462084,0.00084518496,-1.5118763,-0.5963402,1.5118763,"down","FAM18A",780776,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr16:10860532-10912651 (-) // 79.4 // p13.13"]
["11717042_at",-0.53697205,-0.4187832,-0.35696602,0.35696602,0.49465847,0.4797287,0.0010998568,0.00021030854,-1.8421086,-0.88135815,1.8421086,"down","C20orf11",54994,"","0005634 // nucleus // inferred from electronic annotation","","chr20:61569419-61580145 (+) // 96.96 // q13.33"]
["11743163_at",-0.20874596,-0.18770027,-0.14804459,0.26043415,0.43621635,0.14804459,0.0070709703,0.005685401,-1.3784643,-0.463062,1.3784643,"down","ATF1",466,"0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0008063 // Toll signaling pathway // traceable author statement /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0032025 // response to cobalt ion // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0043623 // cellular protein complex assembly // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr12:51157772-51214924 (+) // 96.87 // q13.12"]
["11736239_a_at",-0.17829227,-0.19601822,-0.16950798,0.29627466,0.32522964,0.16950798,0.0017807181,0.00078072987,-1.3612609,-0.4449436,1.3612609,"down","ABCA5",23461,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0010745 // negative regulation of macrophage derived foam cell differentiation // inferred from sequence or structural similarity /// 0010745 // negative regulation of macrophage derived foam cell differentiation // inferred from electronic annotation /// 0033344 // cholesterol efflux // inferred from sequence or structural similarity /// 0033344 // cholesterol efflux // inferred from electronic annotation /// 0034375 // high-density lipoprotein particle remodeling // inferred from sequence or structural similarity /// 0034375 // high-density lipoprotein particle remodeling // inferred from electronic annotation /// 0043691 // reverse cholesterol transport // inferred by curator","0000139 // Golgi membrane // inferred from electronic annotation /// 0005764 // lysosome // inferred from sequence or structural similarity /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from sequence or structural similarity /// 0005770 // late endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr17:67239944-67323252 (-) // 72.88 // q24.3"]
["11723494_a_at",-0.1783123,-0.20549345,-0.1576786,0.45442295,0.42858315,0.1576786,0.006706417,0.0053316304,-1.441319,-0.52738965,1.441319,"down","RNF166",115992,"","0005622 // intracellular // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:88762908-88772801 (-) // 89.46 // q24.3"]
["11758434_s_at",-0.40974712,-0.35171223,-0.23066902,0.23066902,0.37564754,0.28521824,0.0017462111,0.0007475167,-1.5453008,-0.6278877,1.5453008,"down","FBXW2",26190,"0006464 // cellular protein modification process // traceable author statement /// 0006508 // proteolysis // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0016567 // protein ubiquitination // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // traceable author statement /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement","chr9:123521481-123521997 (-) // 38.76 // q33.2"]
["11723279_s_at",-0.41207218,-0.38211775,-0.29885435,0.2989111,0.45161915,0.29885387,0.0012460877,0.00030734768,-1.6405082,-0.7141428,1.6405082,"down","CREBZF",58487,"0006351 // transcription, DNA-dependent // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0009615 // response to virus // inferred from direct assay /// 0045814 // negative regulation of gene expression, epigenetic // inferred from expression pattern /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr11:85368395-85376185 (-) // 93.51 // q14.1"]
["11733197_a_at",-0.18923616,-0.14633894,-0.20297289,0.40628386,0.3422718,0.14633894,0.0053069955,0.003953963,-1.3926321,-0.4778142,1.3926321,"down","KIAA1586",57691,"","","0003676 // nucleic acid binding // inferred from electronic annotation","chr6:56911329-56920119 (+) // 85.61 // p12.1"]
["11725632_at",-0.22424698,-0.17764139,-0.18604374,0.20835686,0.31546497,0.17764139,0.0016183598,0.00062447175,-1.3470454,-0.42979845,1.3470454,"down","NR4A2",4929,"0001666 // response to hypoxia // inferred from electronic annotation /// 0001764 // neuron migration // inferred from electronic annotation /// 0001975 // response to amphetamine // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0010035 // response to inorganic substance // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010467 // gene expression // inferred from electronic annotation /// 0016265 // death // inferred from electronic annotation /// 0017085 // response to insecticide // inferred from electronic annotation /// 0021952 // central nervous system projection neuron axonogenesis // inferred from electronic annotation /// 0021953 // central nervous system neuron differentiation // inferred from electronic annotation /// 0021986 // habenula development // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0030522 // intracellular receptor mediated signaling pathway // traceable author statement /// 0030522 // intracellular receptor mediated signaling pathway // inferred from electronic annotation /// 0031668 // cellular response to extracellular stimulus // inferred from direct assay /// 0031668 // cellular response to extracellular stimulus // inferred from electronic annotation /// 0033554 // cellular response to stress // inferred from electronic annotation /// 0042053 // regulation of dopamine metabolic process // inferred from electronic annotation /// 0042416 // dopamine biosynthetic process // inferred from electronic annotation /// 0042417 // dopamine metabolic process // inferred from electronic annotation /// 0042551 // neuron maturation // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043576 // regulation of respiratory gaseous exchange // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0071542 // dopaminergic neuron differentiation // inferred from electronic annotation /// 0071542 // dopaminergic neuron differentiation // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr2:157180943-157189287 (-) // 97.29 // q24.1"]
["11734004_x_at",-0.25032902,-0.24337578,-0.24549103,0.24337578,0.3202629,0.30624294,0.0005921098,2.2694992e-5,-1.4503078,-0.53635913,1.4503078,"down","ZNF320","162967 /// 201931","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:165997230-166034071 (-) // 71.47 // q32.3"]
["11730732_at",-0.2112484,-0.2398634,-0.31050873,0.3896618,0.26064396,0.2112484,0.0018915365,0.00088222825,-1.4550394,-0.5410582,1.4550394,"down","DNASE2",1777,"0006259 // DNA metabolic process // traceable author statement /// 0006259 // DNA metabolic process // inferred from electronic annotation /// 0006308 // DNA catabolic process // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030218 // erythrocyte differentiation // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation /// 0005764 // lysosome // traceable author statement","0003677 // DNA binding // traceable author statement /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0004520 // endodeoxyribonuclease activity // inferred from electronic annotation /// 0004531 // deoxyribonuclease II activity // inferred from electronic annotation /// 0004531 // deoxyribonuclease II activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation","chr19:12927527-12992386 (-) // 62.07 // p13.2"]
["11715388_s_at",-0.20104885,-0.23075104,-0.2625122,0.27972794,0.20104885,0.3385601,0.0012674241,0.00031876643,-1.4186804,-0.5045497,1.4186804,"down","CDKN1A",1026,"0000075 // cell cycle checkpoint // traceable author statement /// 0000079 // regulation of cyclin-dependent protein kinase activity // traceable author statement /// 0000079 // regulation of cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0000080 // G1 phase of mitotic cell cycle // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // inferred from direct assay /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000086 // G2/M transition of mitotic cell cycle // inferred from mutant phenotype /// 0000278 // mitotic cell cycle // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from mutant phenotype /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // inferred from direct assay /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007050 // cell cycle arrest // inferred from mutant phenotype /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007265 // Ras protein signal transduction // inferred from expression pattern /// 0007346 // regulation of mitotic cell cycle // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0009411 // response to UV // inferred from electronic annotation /// 0009636 // response to toxin // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010243 // response to organic nitrogen // inferred from electronic annotation /// 0010332 // response to gamma radiation // inferred from expression pattern /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0030890 // positive regulation of B cell proliferation // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0031668 // cellular response to extracellular stimulus // inferred from mutant phenotype /// 0033158 // regulation of protein import into nucleus, translocation // inferred from electronic annotation /// 0042326 // negative regulation of phosphorylation // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043068 // positive regulation of programmed cell death // inferred from electronic annotation /// 0045736 // negative regulation of cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0045768 // positive regulation of anti-apoptosis // inferred from electronic annotation /// 0046685 // response to arsenic-containing substance // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048146 // positive regulation of fibroblast proliferation // inferred from mutant phenotype /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051412 // response to corticosterone stimulus // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0055093 // response to hyperoxia // inferred from electronic annotation /// 0071479 // cellular response to ionizing radiation // inferred from mutant phenotype /// 0071850 // mitotic cell cycle arrest // inferred from electronic annotation /// 0090398 // cellular senescence // inferred from mutant phenotype /// 0090400 // stress-induced premature senescence // traceable author statement /// 2000278 // regulation of DNA biosynthetic process // inferred from electronic annotation /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from mutant phenotype","0000307 // cyclin-dependent protein kinase holoenzyme complex // inferred from direct assay /// 0000307 // cyclin-dependent protein kinase holoenzyme complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0070557 // PCNA-p21 complex // inferred from direct assay","0004860 // protein kinase inhibitor activity // inferred from electronic annotation /// 0004861 // cyclin-dependent protein kinase inhibitor activity // inferred from electronic annotation /// 0004861 // cyclin-dependent protein kinase inhibitor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0019912 // cyclin-dependent protein kinase activating kinase activity // inferred from direct assay /// 0030332 // cyclin binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:36646490-36655108 (+) // 72.51 // p21.2"]
["11725456_s_at",-0.29146576,-0.26496267,-0.31765604,0.3040676,0.37084198,0.26496267,0.0007266058,6.188457e-5,-1.5206121,-0.6046522,1.5206121,"down","FBXO33",254170,"0016567 // protein ubiquitination // inferred from electronic annotation","","","chr14:39866885-39901704 (-) // 95.28 // q21.1"]
["11715446_a_at",-0.5156126,-0.70974445,-0.78550625,0.7445879,0.5755949,0.5156126,0.0012010665,0.0002643174,-2.432129,-1.2822196,2.432129,"down","DNAJB1",3337,"0006457 // protein folding // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // traceable author statement /// 0051085 // chaperone mediated protein folding requiring cofactor // inferred from electronic annotation /// 0070389 // chaperone cofactor-dependent protein refolding // inferred from direct assay","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0031072 // heat shock protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr19:14624909-14629338 (-) // 91.55 // p13.12"]
["11729298_a_at",-0.30058384,-0.42519665,-0.46757317,0.30058384,0.37874794,0.39961624,0.001091852,0.00020501613,-1.6904811,-0.7574339,1.6904811,"down","SDE2",163859,"","","","chr1:226170852-226187178 (-) // 40.65 // q42.12"]
["11717496_a_at",-0.17192459,-0.17415619,-0.23462772,0.18087101,0.17192459,0.21312618,0.00084399927,9.163144e-5,-1.303337,-0.38221008,1.303337,"down","IMPA2",3613,"0006021 // inositol biosynthetic process // inferred from electronic annotation /// 0006796 // phosphate-containing compound metabolic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation /// 0046855 // inositol phosphate dephosphorylation // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay","0008934 // inositol monophosphate 1-phosphatase activity // inferred from direct assay /// 0008934 // inositol monophosphate 1-phosphatase activity // inferred from electronic annotation /// 0008934 // inositol monophosphate 1-phosphatase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0052832 // inositol monophosphate 3-phosphatase activity // inferred from electronic annotation /// 0052833 // inositol monophosphate 4-phosphatase activity // inferred from electronic annotation /// 0052834 // inositol monophosphate phosphatase activity // inferred from electronic annotation","chr18:11981426-12030876 (+) // 90.6 // p11.21"]
["11722058_s_at",-0.30084038,-0.35076332,-0.32036018,0.46415615,0.43182755,0.30084038,0.0009984163,0.00015522321,-1.65053,-0.72292936,1.65053,"down","ATL2",64225,"0006184 // GTP catabolic process // non-traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from mutant phenotype /// 0007029 // endoplasmic reticulum organization // inferred from mutant phenotype /// 0007030 // Golgi organization // inferred from mutant phenotype /// 0051260 // protein homooligomerization // inferred from direct assay","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // non-traceable author statement /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from direct assay","chr2:38522021-38604432 (-) // 94.95 // p22.2"]
["11745063_x_at",-0.21608591,-0.1858058,-0.26689625,0.34547663,0.1858058,0.24323416,0.0017807008,0.00077838555,-1.3958089,-0.4811015,1.3958089,"down","LRRC8B",23507,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:90057723-90058936 (+) // 50.0 // p22.2"]
["11745496_a_at",-0.77592707,-0.32515478,-0.26278257,0.26278257,0.34157515,0.3704648,0.010542209,0.0091075245,-1.71661,-0.7795623,1.71661,"down","SPINT2",10653,"0006928 // cellular component movement // traceable author statement /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005625 // soluble fraction // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004866 // endopeptidase inhibitor activity // traceable author statement /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // traceable author statement /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr19:38755182-38783085 (+) // 93.99 // q13.2"]
["11730623_at",-0.61033344,-0.6305833,-0.54047155,0.62289333,0.55236626,0.54047203,0.00040977335,6.3851976e-6,-2.2434306,-1.1657066,2.2434306,"down","DSEL",92126,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008146 // sulfotransferase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation","chr18:65173820-65184217 (-) // 90.76 // q22.1"]
["11758117_s_at",-0.19411373,-0.30024862,-0.27703047,0.5373831,0.32410622,0.19411373,0.005760475,0.0044127796,-1.5252002,-0.60899866,1.5252002,"down","LRRFIP2",9209,"0016055 // Wnt receptor signaling pathway // inferred from electronic annotation","","0005515 // protein binding // inferred from physical interaction /// 0030275 // LRR domain binding // inferred from physical interaction","chr3:37094437-37095137 (-) // 94.6 // p22.2"]
["11732870_a_at",-0.54480314,-0.36582565,-0.56869364,0.36752653,0.43974352,0.36582565,0.0010976536,0.00020770791,-1.8456633,-0.88413936,1.8456633,"down","CASP1",834,"0006508 // proteolysis // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0045087 // innate immune response // traceable author statement /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern /// 0071310 // cellular response to organic substance // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004197 // cysteine-type endopeptidase activity // traceable author statement /// 0004197 // cysteine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0008656 // cysteine-type endopeptidase activator activity involved in apoptotic process // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation","chr11:104896234-104905202 (-) // 96.08 // q22.3"]
["11720035_s_at",-0.18593502,-0.2887802,-0.27831745,0.28554058,0.18593502,0.1872549,0.0015242294,0.0005334935,-1.3856739,-0.47058773,1.3856739,"down","CASP2",835,"0001554 // luteolysis // inferred from electronic annotation /// 0003407 // neural retina development // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006915 // apoptotic process // non-traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // non-traceable author statement /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // inferred from mutant phenotype /// 0007420 // brain development // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0016485 // protein processing // inferred from direct assay /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern /// 0097190 // apoptotic signaling pathway // traceable author statement /// 0097194 // execution phase of apoptosis // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004197 // cysteine-type endopeptidase activity // inferred from direct assay /// 0004197 // cysteine-type endopeptidase activity // inferred from electronic annotation /// 0004197 // cysteine-type endopeptidase activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from sequence or structural similarity /// 0019904 // protein domain specific binding // inferred from physical interaction","chr7:142985307-143004789 (+) // 72.07 // q34"]
["11725501_at",-0.29001427,-0.3103714,-0.2650528,0.35981035,0.2650528,0.30669403,0.0006672249,3.9087754e-5,-1.5146648,-0.59899855,1.5146648,"down","AHNAK",79026,"0007399 // nervous system development // non-traceable author statement","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr11:62201017-62314332 (-) // 94.06 // q12.3"]
["11721875_at",-0.22908115,-0.36737347,-0.34588146,0.5120287,0.25944805,0.22908115,0.004135986,0.0028695406,-1.566594,-0.64763135,1.566594,"down","SLC7A11",23657,"0003333 // amino acid transmembrane transport // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006865 // amino acid transport // traceable author statement /// 0006865 // amino acid transport // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0009636 // response to toxin // inferred from direct assay /// 0035094 // response to nicotine // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0070306 // lens fiber cell differentiation // inferred from electronic annotation","0005791 // rough endoplasmic reticulum // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0015171 // amino acid transmembrane transporter activity // inferred from electronic annotation /// 0015327 // cystine:glutamate antiporter activity // traceable author statement","chr4:139085246-139163724 (-) // 90.24 // q28.3"]
["11758026_s_at",-0.15707064,-0.18977928,-0.21459675,0.15707016,0.27236748,0.1797657,0.001558285,0.0005608228,-1.3105901,-0.39021665,1.3105901,"down","SLC35A5",55032,"0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0015780 // nucleotide-sugar transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005338 // nucleotide-sugar transmembrane transporter activity // inferred from electronic annotation /// 0005351 // sugar:hydrogen symporter activity // inferred from electronic annotation","chr3:112302396-112302997 (+) // 84.03 // q13.2"]
["11743077_s_at",-0.07919216,-0.115345,-0.12478542,0.32833958,0.41760254,0.07919216,0.021593252,0.020254135,-1.3026826,-0.38148564,1.3026826,"down","CEBPB",1051,"0001892 // embryonic placenta development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006953 // acute-phase response // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0006955 // immune response // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0033598 // mammary gland epithelial cell proliferation // inferred from electronic annotation /// 0045408 // regulation of interleukin-6 biosynthetic process // inferred from electronic annotation /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0050873 // brown fat cell differentiation // inferred from electronic annotation /// 0060644 // mammary gland epithelial cell differentiation // inferred from electronic annotation /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation","0000790 // nuclear chromatin // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from electronic annotation","0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0035259 // glucocorticoid receptor binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr20:48807356-48809209 (+) // 78.76 // q13.13"]
["11716665_s_at",-0.29059935,-0.30034637,-0.51047707,0.42693615,0.30929375,0.29059982,0.0020635107,0.0010504175,-1.6351438,-0.70941746,1.6351438,"down","GDF15",9518,"0007165 // signal transduction // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0005125 // cytokine activity // traceable author statement /// 0008083 // growth factor activity // inferred from electronic annotation","chr19:18496769-18499986 (+) // 92.72 // p13.11"]
["11725522_at",-0.32857704,-0.20198345,-0.24937868,0.24312496,0.3792143,0.20198345,0.0022333448,0.0011936179,-1.4486951,-0.5347539,1.4486951,"down","MESP1",55897,"0001947 // heart looping // inferred from sequence or structural similarity /// 0001947 // heart looping // inferred from electronic annotation /// 0003007 // heart morphogenesis // inferred from electronic annotation /// 0003139 // secondary heart field specification // inferred from sequence or structural similarity /// 0003139 // secondary heart field specification // inferred from electronic annotation /// 0003143 // embryonic heart tube morphogenesis // inferred from sequence or structural similarity /// 0003143 // embryonic heart tube morphogenesis // inferred from electronic annotation /// 0003210 // cardiac atrium formation // inferred from mutant phenotype /// 0003211 // cardiac ventricle formation // inferred from mutant phenotype /// 0003236 // sinus venosus morphogenesis // inferred from sequence or structural similarity /// 0003236 // sinus venosus morphogenesis // inferred from electronic annotation /// 0003241 // growth involved in heart morphogenesis // inferred from sequence or structural similarity /// 0003241 // growth involved in heart morphogenesis // inferred from electronic annotation /// 0003259 // cardioblast anterior-lateral migration // inferred from sequence or structural similarity /// 0003259 // cardioblast anterior-lateral migration // inferred from electronic annotation /// 0003260 // cardioblast migration // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007369 // gastrulation // inferred from sequence or structural similarity /// 0007369 // gastrulation // inferred from electronic annotation /// 0008078 // mesodermal cell migration // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from mutant phenotype /// 0023019 // signal transduction involved in regulation of gene expression // inferred from electronic annotation /// 0035481 // positive regulation of Notch signaling pathway involved in heart induction // inferred from electronic annotation /// 0042662 // negative regulation of mesodermal cell fate specification // inferred from sequence or structural similarity /// 0042662 // negative regulation of mesodermal cell fate specification // inferred from electronic annotation /// 0042664 // negative regulation of endodermal cell fate specification // inferred from sequence or structural similarity /// 0042664 // negative regulation of endodermal cell fate specification // inferred from electronic annotation /// 0045446 // endothelial cell differentiation // inferred from mutant phenotype /// 0045747 // positive regulation of Notch signaling pathway // inferred from sequence or structural similarity /// 0045747 // positive regulation of Notch signaling pathway // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048368 // lateral mesoderm development // inferred from sequence or structural similarity /// 0048368 // lateral mesoderm development // inferred from electronic annotation /// 0051155 // positive regulation of striated muscle cell differentiation // inferred from sequence or structural similarity /// 0051155 // positive regulation of striated muscle cell differentiation // inferred from electronic annotation /// 0055007 // cardiac muscle cell differentiation // inferred from mutant phenotype /// 0060913 // cardiac cell fate determination // inferred from sequence or structural similarity /// 0060913 // cardiac cell fate determination // inferred from electronic annotation /// 0060921 // sinoatrial node cell differentiation // inferred from mutant phenotype /// 0060947 // cardiac vascular smooth muscle cell differentiation // inferred from mutant phenotype /// 0060975 // cardioblast migration to the midline involved in heart field formation // inferred from sequence or structural similarity /// 0060975 // cardioblast migration to the midline involved in heart field formation // inferred from electronic annotation /// 0070368 // positive regulation of hepatocyte differentiation // inferred from sequence or structural similarity /// 0070368 // positive regulation of hepatocyte differentiation // inferred from electronic annotation /// 0090082 // positive regulation of heart induction by negative regulation of canonical Wnt receptor signaling pathway // inferred from sequence or structural similarity /// 0090082 // positive regulation of heart induction by negative regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0035326 // enhancer binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay","chr15:90291891-90294541 (-) // 86.66 // q26.1"]
["11759383_at",-0.15814495,-0.20229578,-0.160223,0.15814495,0.22455597,0.28083897,0.0014867174,0.00049820443,-1.3147008,-0.39473456,1.3147008,"down","KRTAP20-2",337976,"","0005882 // intermediate filament // inferred from electronic annotation","","chr21:32007554-32007938 (+) // 100.0 // q22.11"]
["11745204_a_at",-0.200706,-0.2947216,-0.22962141,0.79507875,0.613379,0.20070648,0.013323822,0.011963897,-1.7148366,-0.7780711,1.7148366,"down","TPD52",7163,"0009653 // anatomical structure morphogenesis // traceable author statement /// 0030183 // B cell differentiation // inferred from expression pattern /// 0046903 // secretion // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay","chr8:80947748-81083793 (-) // 99.18 // q21.13"]
["11721055_x_at",-0.28010654,-0.2617445,-0.23989296,0.30202436,0.26127386,0.23989296,0.00055139343,1.662609e-5,-1.4422405,-0.5283117,1.4422405,"down","PRKX",5613,"0001525 // angiogenesis // inferred from mutant phenotype /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001935 // endothelial cell proliferation // inferred from mutant phenotype /// 0001935 // endothelial cell proliferation // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from mutant phenotype /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0030099 // myeloid cell differentiation // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030155 // regulation of cell adhesion // inferred from direct assay /// 0030334 // regulation of cell migration // inferred from direct assay /// 0031589 // cell-substrate adhesion // inferred from mutant phenotype /// 0043542 // endothelial cell migration // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0060562 // epithelial tube morphogenesis // inferred from direct assay /// 0060993 // kidney morphogenesis // inferred from direct assay /// 2000696 // regulation of epithelial cell differentiation involved in kidney development // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004691 // cAMP-dependent protein kinase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chrX:3522410-3631675 (-) // 82.73 // p22.33"]
["11720623_a_at",-0.2621708,-0.17635012,-0.24344063,0.33895636,0.23739862,0.1763506,0.0019091989,0.0009046913,-1.3930262,-0.47822237,1.3930262,"down","MYD88",4615,"0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002238 // response to molecule of fungal origin // inferred from electronic annotation /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007254 // JNK cascade // inferred from electronic annotation /// 0008063 // Toll signaling pathway // traceable author statement /// 0008063 // Toll signaling pathway // inferred from electronic annotation /// 0009615 // response to virus // inferred from electronic annotation /// 0016064 // immunoglobulin mediated immune response // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from electronic annotation /// 0032494 // response to peptidoglycan // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032740 // positive regulation of interleukin-17 production // inferred from sequence or structural similarity /// 0032740 // positive regulation of interleukin-17 production // inferred from electronic annotation /// 0032747 // positive regulation of interleukin-23 production // inferred from sequence or structural similarity /// 0032747 // positive regulation of interleukin-23 production // inferred from electronic annotation /// 0032755 // positive regulation of interleukin-6 production // inferred from sequence or structural similarity /// 0032755 // positive regulation of interleukin-6 production // inferred from electronic annotation /// 0032760 // positive regulation of tumor necrosis factor production // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0044130 // negative regulation of growth of symbiont in host // inferred from electronic annotation /// 0045080 // positive regulation of chemokine biosynthetic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0045351 // type I interferon biosynthetic process // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046330 // positive regulation of JNK cascade // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050671 // positive regulation of lymphocyte proliferation // inferred from electronic annotation /// 0050727 // regulation of inflammatory response // inferred from sequence or structural similarity /// 0050727 // regulation of inflammatory response // inferred from electronic annotation /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from electronic annotation /// 0070555 // response to interleukin-1 // inferred from mutant phenotype /// 0070935 // 3'-UTR-mediated mRNA stabilization // inferred from direct assay /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement","0005102 // receptor binding // inferred from electronic annotation /// 0005121 // Toll binding // inferred from electronic annotation /// 0005123 // death receptor binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0070976 // TIR domain binding // inferred from physical interaction","chr3:38179968-38184513 (+) // 94.78 // p22.2"]
["11727948_a_at",-0.36038065,-0.36046457,-0.2623086,0.2976675,0.44244003,0.26230812,0.0014854231,0.0004957807,-1.5821172,-0.6618565,1.5821172,"down","RAB28",9364,"0006184 // GTP catabolic process // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005525 // GTP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from electronic annotation /// 0019003 // GDP binding // inferred from direct assay","chr4:13369347-13485989 (-) // 98.8 // p15.33"]
["11720377_s_at",-0.22002554,-0.25246286,-0.17939186,0.31102943,0.2320323,0.17939234,0.0014575268,0.00046826657,-1.3737423,-0.45811146,1.3737423,"down","SAP30L",79685,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:153825516-153840613 (+) // 90.35 // q33.2"]
["11717213_a_at",-1.0524626,-0.7798071,-0.92366695,0.8065376,0.93341637,0.7798071,0.0006942706,4.3952532e-5,-3.3836162,-1.7585659,3.3836162,"down","NSMAF",8439,"0006672 // ceramide metabolic process // traceable author statement /// 0007165 // signal transduction // traceable author statement","0005625 // soluble fraction // traceable author statement /// 0005737 // cytoplasm // traceable author statement","0005057 // receptor signaling protein activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr8:59496066-59572404 (-) // 96.84 // q12.1"]
["11755280_x_at",-0.15497208,-0.23638535,-0.24854374,0.15497303,0.17780495,0.19438457,0.0011684936,0.0002475878,-1.3095047,-0.38902125,1.3095047,"down","FTL",2512,"0001501 // skeletal system development // non-traceable author statement /// 0001503 // ossification // inferred from electronic annotation /// 0006826 // iron ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0006879 // cellular iron ion homeostasis // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006907 // pinocytosis // non-traceable author statement /// 0006953 // acute-phase response // inferred from direct assay /// 0008219 // cell death // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from electronic annotation /// 0030500 // regulation of bone mineralization // inferred from electronic annotation /// 0030500 // regulation of bone mineralization // non-traceable author statement /// 0030502 // negative regulation of bone mineralization // inferred from electronic annotation /// 0030502 // negative regulation of bone mineralization // inferred from sequence or structural similarity /// 0031100 // organ regeneration // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0042326 // negative regulation of phosphorylation // non-traceable author statement /// 0045780 // positive regulation of bone resorption // inferred from electronic annotation /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from electronic annotation /// 0046627 // negative regulation of insulin receptor signaling pathway // non-traceable author statement /// 0050727 // regulation of inflammatory response // inferred from mutant phenotype /// 0050766 // positive regulation of phagocytosis // inferred from direct assay /// 0055072 // iron ion homeostasis // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005576 // extracellular region // non-traceable author statement /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0008043 // intracellular ferritin complex // inferred from direct assay /// 0008043 // intracellular ferritin complex // traceable author statement /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0004869 // cysteine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from direct assay /// 0005506 // iron ion binding // traceable author statement /// 0008199 // ferric iron binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0019210 // kinase inhibitor activity // non-traceable author statement /// 0030294 // receptor signaling protein tyrosine kinase inhibitor activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046914 // transition metal ion binding // inferred from electronic annotation","chr19:49468573-49468867 (+) // 73.32 // q13.33"]
["11723684_a_at",-0.23007536,-0.21535254,-0.16047668,0.25132895,0.34968424,0.16047668,0.002569067,0.0014726219,-1.3715414,-0.45579815,1.3715414,"down","RPUSD2",27079,"0001522 // pseudouridine synthesis // inferred from electronic annotation /// 0009451 // RNA modification // inferred from electronic annotation","","0003723 // RNA binding // inferred from electronic annotation /// 0009982 // pseudouridine synthase activity // inferred from electronic annotation","chr15:40861491-40866891 (+) // 90.14 // q15.1"]
["11735341_s_at",-0.22746468,-0.17746449,-0.17800713,0.31664562,0.34915543,0.17746449,0.0020003177,0.0009992974,-1.3903042,-0.4754006,1.3903042,"down","TANC1",85461,"0008542 // visual learning // inferred from electronic annotation /// 0097062 // dendritic spine maintenance // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043679 // axon terminus // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","","chr2:159825145-160089168 (+) // 98.64 // q24.2"]
["11722307_at",-0.36067963,-0.3254552,-0.14556932,0.20762491,0.18334818,0.14556932,0.0039742477,0.002717961,-1.3718114,-0.45608217,1.3718114,"down","GLCE",26035,"0006024 // glycosaminoglycan biosynthetic process // inferred from electronic annotation /// 0015012 // heparan sulfate proteoglycan biosynthetic process // inferred from direct assay /// 0015012 // heparan sulfate proteoglycan biosynthetic process // inferred from electronic annotation /// 0015012 // heparan sulfate proteoglycan biosynthetic process // inferred from sequence or structural similarity /// 0030210 // heparin biosynthetic process // inferred from electronic annotation /// 0030210 // heparin biosynthetic process // inferred from sequence or structural similarity","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016853 // isomerase activity // inferred from electronic annotation /// 0016857 // racemase and epimerase activity, acting on carbohydrates and derivatives // inferred from sequence or structural similarity /// 0016857 // racemase and epimerase activity, acting on carbohydrates and derivatives // inferred from electronic annotation /// 0047464 // heparosan-N-sulfate-glucuronate 5-epimerase activity // inferred from mutant phenotype /// 0050379 // UDP-glucuronate 5'-epimerase activity // inferred from direct assay","chr15:69452972-69564546 (+) // 95.59 // q23"]
["11722244_at",-0.1952753,-0.27378368,-0.19857836,0.48962116,0.45844984,0.1952753,0.0046859384,0.0033701623,-1.519568,-0.60366124,1.519568,"down","TMEM27",57393,"0006508 // proteolysis // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008241 // peptidyl-dipeptidase activity // inferred from electronic annotation","chrX:15645337-15683153 (-) // 95.92 // p22.2"]
["11721237_a_at",-0.23396635,-0.18581963,-0.30016232,0.23013735,0.21737051,0.18581915,0.0011284781,0.00022501523,-1.3670744,-0.45109177,1.3670744,"down","LHFPL2",10184,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr5:77781052-77944648 (-) // 95.8 // q14.1"]
["11722902_a_at",-0.2755313,-0.3535943,-0.4037652,0.2755313,0.35343266,0.35478497,0.0009225327,0.00012310408,-1.5935156,-0.6722132,1.5935156,"down","TRMT13",54482,"0008033 // tRNA processing // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation","","0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:100598641-100616054 (+) // 88.34 // p21.2"]
["11717436_a_at",-0.3326416,-0.51193714,-0.4304123,0.4034195,0.3326416,0.3652439,0.0009735221,0.00014218122,-1.7315915,-0.79209864,1.7315915,"down","CDCA7L",55536,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","","chr7:21940516-21985702 (-) // 92.81 // p15.3"]
["11717451_at",-0.40741348,-0.47431135,-0.31124973,0.67202663,0.59703255,0.31124973,0.0026042238,0.0015119822,-1.8979315,-0.92442787,1.8979315,"down","NEK7",140609,"0000910 // cytokinesis // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007346 // regulation of mitotic cell cycle // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0051225 // spindle assembly // traceable author statement","0000922 // spindle pole // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from sequence or structural similarity /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:198126109-198291550 (+) // 97.61 // q31.3"]
["11737052_x_at",-0.1911583,-0.18875885,-0.13781357,0.26987553,0.30016518,0.13781357,0.0025946551,0.0015018159,-1.3273312,-0.40852833,1.3273312,"down","PLAGL1",5325,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0007050 // cell cycle arrest // traceable author statement /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:144261436-144385735 (-) // 92.22 // q24.2"]
["11721860_s_at",-0.23335457,-0.22442245,-0.1620884,0.3467455,0.29439688,0.1620884,0.0023907758,0.0013279078,-1.389307,-0.4743654,1.389307,"down","STX12",23673,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0033344 // cholesterol efflux // inferred from direct assay /// 0050821 // protein stabilization // inferred from direct assay","0000139 // Golgi membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay /// 0045335 // phagocytic vesicle // inferred from direct assay","0005484 // SNAP receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:28099663-28150962 (+) // 91.29 // p35.3"]
["11715545_at",-0.18973255,-0.34687805,-0.23703194,0.2821722,0.27485657,0.18973255,0.0017807181,0.0007814607,-1.4208963,-0.50680125,1.4208963,"down","TMED10",10972,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from direct assay /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // inferred from sequence or structural similarity /// 0007030 // Golgi organization // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0034205 // beta-amyloid formation // inferred from mutant phenotype /// 0035459 // cargo loading into vesicle // traceable author statement /// 0035964 // COPI-coated vesicle budding // inferred from direct assay /// 0045055 // regulated secretory pathway // inferred from sequence or structural similarity /// 0045055 // regulated secretory pathway // inferred from electronic annotation /// 0048199 // vesicle targeting, to, from or within Golgi // inferred from sequence or structural similarity /// 0048199 // vesicle targeting, to, from or within Golgi // inferred from electronic annotation /// 0048205 // COPI coating of Golgi vesicle // traceable author statement /// 0048208 // COPII vesicle coating // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from sequence or structural similarity /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005801 // cis-Golgi network // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from sequence or structural similarity /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030137 // COPI-coated vesicle // inferred from sequence or structural similarity /// 0030140 // trans-Golgi network transport vesicle // inferred from sequence or structural similarity /// 0030658 // transport vesicle membrane // inferred from electronic annotation /// 0030667 // secretory granule membrane // inferred from sequence or structural similarity /// 0030667 // secretory granule membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0042589 // zymogen granule membrane // inferred from sequence or structural similarity /// 0042589 // zymogen granule membrane // inferred from electronic annotation /// 0070765 // gamma-secretase complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr14:75598171-75643349 (-) // 65.49 // q24.3"]
["11748338_a_at",-0.19425106,-0.17606258,-0.13563871,0.13563919,0.2984743,0.46483564,0.009849337,0.008352,-1.3834788,-0.46830052,1.3834788,"down","SLC31A2",1318,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006825 // copper ion transport // traceable author statement /// 0006825 // copper ion transport // inferred from electronic annotation /// 0035434 // copper ion transmembrane transport // traceable author statement /// 0035434 // copper ion transmembrane transport // inferred from electronic annotation","0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005375 // copper ion transmembrane transporter activity // inferred from electronic annotation /// 0005375 // copper ion transmembrane transporter activity // traceable author statement","chr9:115913255-115924525 (+) // 76.1 // q32"]
["11716662_at",-0.20666075,-0.20656872,-0.20350075,0.32057,0.38194466,0.20350075,0.0016202792,0.00063340296,-1.4216653,-0.5075819,1.4216653,"down","KIAA0247",9766,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr14:70078312-70181859 (+) // 97.56 // q24.1"]
["11722929_a_at",-0.6001129,-0.6666994,-0.5017142,0.6228838,0.50171375,0.536355,0.0006943628,4.4579963e-5,-2.208642,-1.1431596,2.208642,"down","CNKSR3",154043,"0009966 // regulation of signal transduction // inferred from electronic annotation /// 0010765 // positive regulation of sodium ion transport // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation /// 0033137 // negative regulation of peptidyl-serine phosphorylation // inferred from sequence or structural similarity /// 0070373 // negative regulation of ERK1 and ERK2 cascade // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation","chr6:154726293-154831803 (-) // 99.77 // q25.2"]
["11719934_a_at",-0.37328243,-0.36644173,-0.26345253,0.5978699,0.2903247,0.263453,0.00444491,0.0031397163,-1.6452134,-0.7182747,1.6452134,"down","TKT",7086,"0005975 // carbohydrate metabolic process // traceable author statement /// 0005999 // xylulose biosynthetic process // traceable author statement /// 0006098 // pentose-phosphate shunt // traceable author statement /// 0006098 // pentose-phosphate shunt // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009052 // pentose-phosphate shunt, non-oxidative branch // non-traceable author statement /// 0009052 // pentose-phosphate shunt, non-oxidative branch // inferred from electronic annotation /// 0040008 // regulation of growth // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046166 // glyceraldehyde-3-phosphate biosynthetic process // inferred from direct assay /// 0046390 // ribose phosphate biosynthetic process // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000287 // magnesium ion binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004802 // transketolase activity // not recorded /// 0004802 // transketolase activity // inferred from direct assay /// 0004802 // transketolase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030976 // thiamine pyrophosphate binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048029 // monosaccharide binding // inferred from electronic annotation /// 0048037 // cofactor binding // inferred from direct assay","chr3:53258730-53290068 (-) // 93.48 // p21.1"]
["11762249_a_at",-0.3273139,-0.6754155,-0.6341834,0.3273139,0.43867064,0.42919254,0.0022608375,0.001218048,-1.9238948,-0.9440299,1.9238948,"down","RPF2",84154,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation","","chr6:111303250-111347962 (+) // 99.53 // q21"]
["11746180_a_at",-0.18774223,-0.2370758,-0.20175362,0.37166786,0.37248135,0.18774319,0.0022323814,0.0011921417,-1.4334465,-0.51948804,1.4334465,"down","CD55",1604,"0006958 // complement activation, classical pathway // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from direct assay /// 0030449 // regulation of complement activation // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0045730 // respiratory burst // non-traceable author statement","0005576 // extracellular region // traceable author statement /// 0005625 // soluble fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay","0004872 // receptor activity // inferred from electronic annotation","chr1:207495077-207533846 (+) // 96.56 // q32.2"]
["11723930_at",-0.28755713,-0.22108269,-0.22111607,0.22135687,0.30557632,0.22108269,0.001006007,0.00016160232,-1.4069691,-0.4925906,1.4069691,"down","CCT5",22948,"0006457 // protein folding // traceable author statement /// 0006457 // protein folding // inferred from electronic annotation /// 0009615 // response to virus // inferred from expression pattern /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044267 // cellular protein metabolic process // inferred from electronic annotation /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement","0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005832 // chaperonin-containing T-complex // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr5:10250281-10267258 (+) // 89.37 // p15.2"]
["11728834_x_at",-0.24609518,-0.22698355,-0.16614914,0.19108534,0.1742754,0.16614914,0.0008700153,0.00010143993,-1.3106167,-0.3902459,1.3106167,"down","C4orf32",132720,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr4:113066522-113110237 (+) // 91.55 // q25"]
["11757835_s_at",-0.24746513,-0.36665916,-0.30658245,0.71076584,0.47547913,0.24746561,0.0060592825,0.0047336514,-1.7228603,-0.7848058,1.7228603,"down","CPEB4",80315,"","","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr5:173385101-173385693 (+) // 91.47 // q35.2"]
["11733304_x_at",-0.46889973,-0.8816309,-0.6241269,0.63044643,0.46889973,0.62886524,0.0017193909,0.0007230725,-2.3526547,-1.2342896,2.3526547,"down","ZMAT3",64393,"0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0040008 // regulation of growth // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:178741516-178790067 (-) // 86.9 // q26.32"]
["11718181_s_at",-0.16207123,-0.2308693,-0.17381573,0.21857738,0.20202732,0.16207123,0.0009735221,0.00014464476,-1.304181,-0.38314408,1.304181,"down","FERMT2",10979,"0007155 // cell adhesion // non-traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // non-traceable author statement /// 0034329 // cell junction assembly // traceable author statement","0001725 // stress fiber // non-traceable author statement /// 0001725 // stress fiber // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation","chr14:53323988-53417862 (-) // 95.37 // q22.1"]
["11719510_at",-0.11966419,-0.08834505,-0.13962889,0.5225458,0.42213535,0.088344574,0.026473869,0.025253927,-1.3757528,-0.4602213,1.3757528,"down","HELZ",9931,"","0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:65066559-65242105 (-) // 94.74 // q24.2"]
["11743688_at",-0.27278948,-0.26781225,-0.33360624,0.39573765,0.26781178,0.31908035,0.0009526495,0.00013251757,-1.5357528,-0.61894596,1.5357528,"down","GLI2",2736,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0001501 // skeletal system development // inferred from electronic annotation /// 0001501 // skeletal system development // inferred from sequence or structural similarity /// 0001649 // osteoblast differentiation // inferred from direct assay /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001822 // kidney development // inferred from sequence or structural similarity /// 0002009 // morphogenesis of an epithelium // inferred from electronic annotation /// 0002076 // osteoblast development // inferred from electronic annotation /// 0002076 // osteoblast development // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007224 // smoothened signaling pathway // inferred from direct assay /// 0007224 // smoothened signaling pathway // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from sequence or structural similarity /// 0007389 // pattern specification process // inferred from electronic annotation /// 0007411 // axon guidance // inferred from electronic annotation /// 0007411 // axon guidance // inferred from sequence or structural similarity /// 0007418 // ventral midline development // inferred from sequence or structural similarity /// 0007418 // ventral midline development // inferred from electronic annotation /// 0007442 // hindgut morphogenesis // inferred from electronic annotation /// 0007442 // hindgut morphogenesis // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from electronic annotation /// 0007507 // heart development // inferred from sequence or structural similarity /// 0008283 // cell proliferation // inferred from direct assay /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008589 // regulation of smoothened signaling pathway // inferred from electronic annotation /// 0009913 // epidermal cell differentiation // inferred from direct assay /// 0009953 // dorsal/ventral pattern formation // inferred from electronic annotation /// 0009954 // proximal/distal pattern formation // inferred from sequence or structural similarity /// 0021508 // floor plate formation // inferred from electronic annotation /// 0021508 // floor plate formation // inferred from sequence or structural similarity /// 0021513 // spinal cord dorsal/ventral patterning // inferred from sequence or structural similarity /// 0021513 // spinal cord dorsal/ventral patterning // inferred from electronic annotation /// 0021517 // ventral spinal cord development // inferred from sequence or structural similarity /// 0021517 // ventral spinal cord development // inferred from electronic annotation /// 0021696 // cerebellar cortex morphogenesis // inferred from electronic annotation /// 0021696 // cerebellar cortex morphogenesis // inferred from sequence or structural similarity /// 0021775 // smoothened signaling pathway involved in ventral spinal cord interneuron specification // inferred from electronic annotation /// 0021775 // smoothened signaling pathway involved in ventral spinal cord interneuron specification // inferred from sequence or structural similarity /// 0021776 // smoothened signaling pathway involved in spinal cord motor neuron cell fate specification // inferred from electronic annotation /// 0021904 // dorsal/ventral neural tube patterning // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0021938 // smoothened signaling pathway involved in regulation of cerebellar granule cell precursor cell proliferation // inferred from electronic annotation /// 0021965 // spinal cord ventral commissure morphogenesis // inferred from electronic annotation /// 0021965 // spinal cord ventral commissure morphogenesis // inferred from sequence or structural similarity /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030324 // lung development // inferred from sequence or structural similarity /// 0030879 // mammary gland development // inferred from sequence or structural similarity /// 0030879 // mammary gland development // inferred from electronic annotation /// 0030902 // hindbrain development // inferred from sequence or structural similarity /// 0030902 // hindbrain development // inferred from electronic annotation /// 0032331 // negative regulation of chondrocyte differentiation // inferred from electronic annotation /// 0033089 // positive regulation of T cell differentiation in thymus // inferred from sequence or structural similarity /// 0035295 // tube development // inferred from sequence or structural similarity /// 0035295 // tube development // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from sequence or structural similarity /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048566 // embryonic digestive tract development // inferred from electronic annotation /// 0048566 // embryonic digestive tract development // inferred from sequence or structural similarity /// 0048589 // developmental growth // inferred from electronic annotation /// 0048589 // developmental growth // inferred from sequence or structural similarity /// 0048646 // anatomical structure formation involved in morphogenesis // inferred from electronic annotation /// 0048666 // neuron development // inferred from sequence or structural similarity /// 0048666 // neuron development // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from sequence or structural similarity /// 0048856 // anatomical structure development // inferred from electronic annotation /// 0060032 // notochord regression // inferred from electronic annotation /// 0060322 // head development // inferred from electronic annotation /// 0060513 // prostatic bud formation // inferred from electronic annotation /// 0060603 // mammary gland duct morphogenesis // inferred from electronic annotation /// 0060831 // smoothened signaling pathway involved in dorsal/ventral neural tube patterning // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0090103 // cochlea morphogenesis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0031512 // motile primary cilium // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:121554865-121750228 (+) // 98.17 // q14.2"]
["11757445_s_at",-0.16317844,-0.17976952,-0.2539072,0.35598564,0.23886585,0.16317844,0.003135014,0.0019617465,-1.3675829,-0.45162836,1.3675829,"down","PTEN",5728,"0000079 // regulation of cyclin-dependent protein kinase activity // traceable author statement /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001933 // negative regulation of protein phosphorylation // inferred from direct assay /// 0002902 // regulation of B cell apoptotic process // inferred from electronic annotation /// 0006470 // protein dephosphorylation // inferred from direct assay /// 0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from sequence or structural similarity /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0007092 // activation of mitotic anaphase-promoting complex activity // inferred from direct assay /// 0007092 // activation of mitotic anaphase-promoting complex activity // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007270 // neuron-neuron synaptic transmission // inferred from sequence or structural similarity /// 0007399 // nervous system development // inferred from electronic annotation /// 0007416 // synapse assembly // inferred from sequence or structural similarity /// 0007417 // central nervous system development // inferred from sequence or structural similarity /// 0007417 // central nervous system development // inferred from electronic annotation /// 0007507 // heart development // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from electronic annotation /// 0007611 // learning or memory // inferred from sequence or structural similarity /// 0007626 // locomotory behavior // inferred from sequence or structural similarity /// 0008283 // cell proliferation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from sequence or structural similarity /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0010975 // regulation of neuron projection development // inferred from sequence or structural similarity /// 0010975 // regulation of neuron projection development // inferred from electronic annotation /// 0014067 // negative regulation of phosphatidylinositol 3-kinase cascade // traceable author statement /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0016477 // cell migration // inferred from sequence or structural similarity /// 0016477 // cell migration // inferred from electronic annotation /// 0021542 // dentate gyrus development // inferred from sequence or structural similarity /// 0021955 // central nervous system neuron axonogenesis // inferred from sequence or structural similarity /// 0030336 // negative regulation of cell migration // inferred from mutant phenotype /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0031647 // regulation of protein stability // inferred from mutant phenotype /// 0031647 // regulation of protein stability // inferred from electronic annotation /// 0031658 // negative regulation of cyclin-dependent protein kinase activity involved in G1/S // inferred from direct assay /// 0032286 // central nervous system myelin maintenance // inferred from sequence or structural similarity /// 0032535 // regulation of cellular component size // inferred from sequence or structural similarity /// 0033032 // regulation of myeloid cell apoptotic process // inferred from electronic annotation /// 0033555 // multicellular organismal response to stress // inferred from sequence or structural similarity /// 0035176 // social behavior // inferred from sequence or structural similarity /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from direct assay /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043491 // protein kinase B signaling cascade // inferred from sequence or structural similarity /// 0043491 // protein kinase B signaling cascade // inferred from electronic annotation /// 0043542 // endothelial cell migration // inferred from electronic annotation /// 0045475 // locomotor rhythm // inferred from sequence or structural similarity /// 0045792 // negative regulation of cell size // inferred from sequence or structural similarity /// 0046621 // negative regulation of organ growth // inferred from sequence or structural similarity /// 0046855 // inositol phosphate dephosphorylation // inferred from direct assay /// 0046855 // inositol phosphate dephosphorylation // inferred from electronic annotation /// 0046856 // phosphatidylinositol dephosphorylation // inferred from direct assay /// 0046856 // phosphatidylinositol dephosphorylation // inferred from mutant phenotype /// 0046856 // phosphatidylinositol dephosphorylation // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048738 // cardiac muscle tissue development // inferred from electronic annotation /// 0048853 // forebrain morphogenesis // inferred from sequence or structural similarity /// 0048854 // brain morphogenesis // inferred from sequence or structural similarity /// 0050680 // negative regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050771 // negative regulation of axonogenesis // inferred from sequence or structural similarity /// 0050821 // protein stabilization // inferred from direct assay /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0051895 // negative regulation of focal adhesion assembly // inferred from mutant phenotype /// 0051895 // negative regulation of focal adhesion assembly // inferred from electronic annotation /// 0051898 // negative regulation of protein kinase B signaling cascade // inferred from mutant phenotype /// 0051898 // negative regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0060024 // rhythmic synaptic transmission // inferred from sequence or structural similarity /// 0060070 // canonical Wnt receptor signaling pathway // inferred from direct assay /// 0060074 // synapse maturation // inferred from sequence or structural similarity /// 0060134 // prepulse inhibition // inferred from sequence or structural similarity /// 0060736 // prostate gland growth // inferred from electronic annotation /// 0060997 // dendritic spine morphogenesis // inferred from sequence or structural similarity /// 0061002 // negative regulation of dendritic spine morphogenesis // inferred from sequence or structural similarity /// 0090344 // negative regulation of cell aging // inferred from electronic annotation /// 0090394 // negative regulation of excitatory postsynaptic membrane potential // inferred from sequence or structural similarity /// 0097105 // presynaptic membrane assembly // inferred from sequence or structural similarity /// 0097107 // postsynaptic density assembly // inferred from sequence or structural similarity /// 2000060 // positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from direct assay /// 2000134 // negative regulation of G1/S transition of mitotic cell cycle // inferred from direct assay /// 2000463 // positive regulation of excitatory postsynaptic membrane potential // inferred from sequence or structural similarity /// 2000808 // negative regulation of synaptic vesicle clustering // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0009898 // internal side of plasma membrane // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation /// 0019717 // synaptosome // inferred from sequence or structural similarity /// 0019717 // synaptosome // inferred from electronic annotation /// 0035749 // myelin sheath adaxonal region // inferred from sequence or structural similarity /// 0035749 // myelin sheath adaxonal region // inferred from electronic annotation /// 0042995 // cell projection // inferred from direct assay /// 0043005 // neuron projection // inferred from sequence or structural similarity /// 0043220 // Schmidt-Lanterman incisure // inferred from sequence or structural similarity /// 0043220 // Schmidt-Lanterman incisure // inferred from electronic annotation","0000287 // magnesium ion binding // inferred from electronic annotation /// 0004438 // phosphatidylinositol-3-phosphatase activity // inferred from direct assay /// 0004721 // phosphoprotein phosphatase activity // inferred from direct assay /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0010997 // anaphase-promoting complex binding // inferred from physical interaction /// 0016314 // phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity // inferred from direct assay /// 0016314 // phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity // traceable author statement /// 0016314 // phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from physical interaction /// 0030165 // PDZ domain binding // inferred from electronic annotation /// 0051717 // inositol-1,3,4,5-tetrakisphosphate 3-phosphatase activity // inferred from direct assay /// 0051800 // phosphatidylinositol-3,4-bisphosphate 3-phosphatase activity // inferred from direct assay /// 0051800 // phosphatidylinositol-3,4-bisphosphate 3-phosphatase activity // inferred from electronic annotation","chr10:89728039-89728532 (+) // 92.5 // q23.31"]
["11736443_x_at",-0.22831249,-0.1599679,-0.26260233,0.48764753,0.1599679,0.29980755,0.007295517,0.005891083,-1.4467028,-0.5327686,1.4467028,"down","SPINK7",84651,"0010466 // negative regulation of peptidase activity // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr5:147691989-147695479 (+) // 95.8 // q32"]
["11744800_x_at",-0.1266694,-0.101558685,-0.10117197,0.5520029,0.2661276,0.10117197,0.03553473,0.034377225,-1.3344398,-0.41623417,1.3344398,"down","FLT3LG",2323,"0007165 // signal transduction // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0035162 // embryonic hemopoiesis // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005625 // soluble fraction // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005102 // receptor binding // traceable author statement /// 0005125 // cytokine activity // inferred from electronic annotation","chr19:49977842-49989487 (+) // 83.95 // q13.33"]
["11736666_a_at",-0.53512526,-0.43800688,-0.37785673,0.4194908,0.5542946,0.3778572,0.0011069006,0.00021308553,-1.867201,-0.9008772,1.867201,"down","PTER",9317,"0009056 // catabolic process // inferred from electronic annotation","","0003723 // RNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:16478963-16555736 (+) // 94.0 // p13"]
["11754296_a_at",-0.17719269,-0.4233451,-0.5055046,0.21939373,0.23551273,0.17719269,0.0057820277,0.00443737,-1.4942075,-0.5793805,1.4942075,"down","AEN",64782,"0006915 // apoptotic process // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0010212 // response to ionizing radiation // inferred from direct assay /// 0042771 // DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis // inferred from direct assay /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred from direct assay /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr15:89169370-89175512 (+) // 90.63 // q26.1"]
["11732140_at",-0.25228596,-0.35043907,-0.14784908,0.1624484,0.14784908,0.20749187,0.003512565,0.0023008662,-1.3405154,-0.42278782,1.3405154,"down","COX16","100529257 /// 51241","","0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","","chr14:70791798-70826448 (-) // 78.09 // q24.2"]
["11733891_at",-0.40320778,-0.29068995,-0.4224515,0.57156086,0.3411436,0.29069042,0.0023178372,0.0012757089,-1.7091134,-0.7732481,1.7091134,"down","FKBP14",55033,"0000413 // protein peptidyl-prolyl isomerization // not recorded /// 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006457 // protein folding // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0018208 // peptidyl-proline modification // not recorded /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation /// 0016020 // membrane // not recorded","0003755 // peptidyl-prolyl cis-trans isomerase activity // not recorded /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005528 // FK506 binding // not recorded /// 0016853 // isomerase activity // inferred from electronic annotation","chr7:30051416-30066417 (-) // 69.04 // p14.3"]
["11721286_at",-0.33773232,-0.32571793,-0.33883667,0.32571793,0.3681326,0.41346645,0.0005096163,1.0579297e-5,-1.6281135,-0.7032013,1.6281135,"down","PREP",5550,"0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0004175 // endopeptidase activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // traceable author statement /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation /// 0070008 // serine-type exopeptidase activity // inferred from electronic annotation","chr6:105725440-105851465 (-) // 94.3 // q21"]
["11727048_s_at",-0.2433567,-0.24562931,-0.15381813,0.15381813,0.39508152,0.15720367,0.0076475614,0.006231346,-1.3656955,-0.4496358,1.3656955,"down","PPP6C",5537,"0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0006470 // protein dephosphorylation // inferred from direct assay /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006470 // protein dephosphorylation // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // inferred from direct assay /// 0004722 // protein serine/threonine phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:127908852-127952218 (-) // 96.0 // q33.3"]
["11740158_x_at",-0.44394255,-0.46921873,-0.31283522,0.54555655,0.31283522,0.37716627,0.0016202792,0.00063359755,-1.7660402,-0.8205182,1.7660402,"down","ATG10",83734,"0006497 // protein lipidation // inferred from sequence or structural similarity /// 0006497 // protein lipidation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006914 // autophagy // inferred from mutant phenotype /// 0006914 // autophagy // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0031401 // positive regulation of protein modification process // inferred from sequence or structural similarity /// 0031401 // positive regulation of protein modification process // inferred from electronic annotation /// 0032446 // protein modification by small protein conjugation // inferred from direct assay /// 0034263 // autophagy in response to ER overload // inferred from mutant phenotype","0005622 // intracellular // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0016874 // ligase activity // inferred from electronic annotation /// 0019777 // Atg12 ligase activity // inferred from sequence or structural similarity /// 0019777 // Atg12 ligase activity // inferred from electronic annotation","chr5:81267843-81551211 (+) // 77.11 // q14.1"]
["11739799_a_at",-0.40972948,-0.28348255,-0.3438897,0.34249544,0.39642286,0.28348303,0.0009813054,0.00014955376,-1.6093756,-0.686501,1.6093756,"down","LY6K",54742,"","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation","","chr8:143781528-143786054 (+) // 59.9 // q24.3"]
["11756199_a_at",-0.18838882,-0.24715853,-0.31075,0.6049156,0.56473637,0.18838882,0.008374895,0.006935798,-1.6261339,-0.70144606,1.6261339,"down","ATMIN",23300,"0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0045502 // dynein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:81070791-81080955 (+) // 89.2 // q23.2"]
["11741168_a_at",-0.14917946,-0.2043333,-0.16020823,0.25533056,0.23708534,0.14917946,0.001459056,0.0004735899,-1.3059552,-0.38510543,1.3059552,"down","MSRB3",253827,"0030091 // protein repair // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation","0000318 // protein-methionine-R-oxide reductase activity // inferred from direct assay /// 0008113 // peptide-methionine-(S)-S-oxide reductase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:65672422-65860680 (+) // 85.91 // q14.3"]
["11734939_a_at",-0.22117424,-0.31070757,-0.21790504,0.21790552,0.41500282,0.32101965,0.0019288461,0.0009195662,-1.4823693,-0.56790495,1.4823693,"down","SLC16A9",220963,"0006810 // transport // inferred from electronic annotation /// 0046415 // urate metabolic process // inferred from mutant phenotype /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0015293 // symporter activity // inferred from electronic annotation","chr10:61410522-61469837 (-) // 91.24 // q21.2"]
["11730792_at",-0.22065258,-0.23225069,-0.19727707,0.19727755,0.23352432,0.2012415,0.0004969139,1.0058119e-5,-1.3448151,-0.42740792,1.3448151,"down","SVIP",258010,"","0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030868 // smooth endoplasmic reticulum membrane // inferred from electronic annotation","","chr11:22840474-22851398 (-) // 83.03 // p14.3"]
["11737296_s_at",-0.5263934,-0.83616734,-0.7576699,0.5263934,0.8021951,0.61977243,0.0013662435,0.0003883488,-2.5600946,-1.3561971,2.5600946,"down","TMTC4",84899,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr13:101256090-101327103 (-) // 98.89 // q32.3"]
["11749094_a_at",-0.25128174,-0.27034044,-0.18364811,0.35629416,0.2432208,0.18364763,0.0019608224,0.00096280355,-1.410439,-0.4961443,1.410439,"down","DSE",29940,"0006334 // nucleosome assembly // inferred from electronic annotation /// 0015012 // heparan sulfate proteoglycan biosynthetic process // inferred from electronic annotation /// 0030206 // chondroitin sulfate biosynthetic process // inferred from electronic annotation /// 0030208 // dermatan sulfate biosynthetic process // inferred from direct assay","0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016853 // isomerase activity // inferred from electronic annotation /// 0047757 // chondroitin-glucuronate 5-epimerase activity // inferred from direct assay /// 0047757 // chondroitin-glucuronate 5-epimerase activity // inferred from electronic annotation","chr6:116601248-116758984 (+) // 96.82 // q22.1"]
["11717438_x_at",-0.4284048,-0.39464474,-0.3473978,0.61787796,0.3473978,0.34969997,0.0018736367,0.0008705105,-1.7758065,-0.8284744,1.7758065,"down","TOP1",7150,"0006260 // DNA replication // not recorded /// 0006260 // DNA replication // inferred from electronic annotation /// 0006265 // DNA topological change // not recorded /// 0006265 // DNA topological change // inferred from electronic annotation /// 0006338 // chromatin remodeling // not recorded /// 0007059 // chromosome segregation // not recorded /// 0012501 // programmed cell death // non-traceable author statement /// 0016310 // phosphorylation // non-traceable author statement /// 0040016 // embryonic cleavage // inferred from electronic annotation /// 0042493 // response to drug // inferred from expression pattern /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0000228 // nuclear chromosome // inferred from direct assay /// 0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0031298 // replication fork protection complex // not recorded /// 0043204 // perikaryon // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0003916 // DNA topoisomerase activity // inferred from electronic annotation /// 0003917 // DNA topoisomerase type I activity // inferred from mutant phenotype /// 0003917 // DNA topoisomerase type I activity // inferred from electronic annotation /// 0003918 // DNA topoisomerase (ATP-hydrolyzing) activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation","chr20:39657459-39753124 (+) // 93.96 // q12"]
["11716437_a_at",-0.18643093,-0.15564632,-0.21017742,0.6517582,0.20972347,0.15564632,0.030751005,0.029585592,-1.4370673,-0.52312756,1.4370673,"down","RAD21",5885,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006302 // double-strand break repair // traceable author statement /// 0006310 // DNA recombination // traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007091 // mitotic metaphase/anaphase transition // traceable author statement /// 0007131 // reciprocal meiotic recombination // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0071168 // protein localization to chromatin // inferred from mutant phenotype","0000228 // nuclear chromosome // inferred from electronic annotation /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0008278 // cohesin complex // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr8:117858172-117887109 (-) // 96.69 // q24.11"]
["11736169_a_at",-0.2664423,-0.33872318,-0.5657902,0.36846542,0.2664423,0.29587746,0.0029613294,0.001812252,-1.6251583,-0.70058024,1.6251583,"down","NDEL1",81565,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0001764 // neuron migration // inferred from electronic annotation /// 0001833 // inner cell mass cell proliferation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from mutant phenotype /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0008090 // retrograde axon cargo transport // inferred from electronic annotation /// 0010975 // regulation of neuron projection development // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0021799 // cerebral cortex radially oriented cell migration // inferred from electronic annotation /// 0021955 // central nervous system neuron axonogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0032864 // activation of Cdc42 GTPase activity // inferred from electronic annotation /// 0045773 // positive regulation of axon extension // inferred from electronic annotation /// 0048680 // positive regulation of axon regeneration // inferred from electronic annotation /// 0051081 // nuclear envelope disassembly // inferred from electronic annotation /// 0051642 // centrosome localization // inferred from electronic annotation /// 0060052 // neurofilament cytoskeleton organization // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005871 // kinesin complex // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005875 // microtubule associated complex // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation /// 0060053 // neurofilament cytoskeleton // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from electronic annotation /// 0043014 // alpha-tubulin binding // inferred from electronic annotation /// 0048487 // beta-tubulin binding // inferred from electronic annotation /// 0070012 // oligopeptidase activity // inferred from electronic annotation","chr17:8339176-8371481 (+) // 95.42 // p13.1"]
["11737753_s_at",-0.27812672,-0.30104828,-0.20410538,0.29811764,0.20410538,0.22192669,0.0011846017,0.00025629753,-1.4166435,-0.5024767,1.4166435,"down","SNX5",27131,"0006810 // transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0006907 // pinocytosis // inferred from direct assay /// 0007154 // cell communication // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0001726 // ruffle // inferred from electronic annotation /// 0001891 // phagocytic cup // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031234 // extrinsic to internal side of plasma membrane // inferred from direct assay /// 0031313 // extrinsic to endosome membrane // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from direct assay /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0070685 // macropinocytic cup // inferred from direct assay","0008289 // lipid binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from direct assay /// 0035091 // phosphatidylinositol binding // inferred from sequence or structural similarity /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr20:17922245-17949496 (-) // 97.56 // p11.23"]
["11741435_s_at",-0.16304684,-0.24200916,-0.24102402,0.38688755,0.16304684,0.24204445,0.0036755858,0.0024531144,-1.3941183,-0.47935295,1.3941183,"down","GRB2",2885,"0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from physical interaction /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030838 // positive regulation of actin filament polymerization // inferred from electronic annotation /// 0031295 // T cell costimulation // traceable author statement /// 0031623 // receptor internalization // inferred from mutant phenotype /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0042770 // signal transduction in response to DNA damage // inferred from mutant phenotype /// 0043408 // regulation of MAPK cascade // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048646 // anatomical structure formation involved in morphogenesis // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0060670 // branching involved in labyrinthine layer morphogenesis // inferred from electronic annotation /// 0071479 // cellular response to ionizing radiation // inferred from mutant phenotype /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0012506 // vesicle membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0070436 // Grb2-EGFR complex // inferred from direct assay","0001784 // phosphotyrosine binding // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005070 // SH3/SH2 adaptor activity // inferred from electronic annotation /// 0005154 // epidermal growth factor receptor binding // inferred from physical interaction /// 0005154 // epidermal growth factor receptor binding // inferred from electronic annotation /// 0005168 // neurotrophin TRKA receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019903 // protein phosphatase binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0043560 // insulin receptor substrate binding // inferred from physical interaction /// 0043560 // insulin receptor substrate binding // inferred from electronic annotation /// 0046875 // ephrin receptor binding // inferred from physical interaction /// 0046875 // ephrin receptor binding // inferred from electronic annotation /// 0051219 // phosphoprotein binding // inferred from electronic annotation","chr17:73314156-73401796 (-) // 87.7 // q25.1"]
["11744338_a_at",-0.18244648,-0.19972229,-0.13582993,0.13582993,0.2535801,0.2778492,0.0022128797,0.0011718518,-1.3150212,-0.395086,1.3150212,"down","COPS7A",50813,"0010388 // cullin deneddylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008180 // signalosome // inferred from direct assay /// 0008180 // signalosome // inferred from electronic annotation","","chr12:6807789-6841031 (+) // 98.43 // p13.31"]
["11737219_a_at",-0.4440384,-0.32178116,-0.36068726,0.32178116,0.4603157,0.46796036,0.0010771177,0.00018568568,-1.7316988,-0.792188,1.7316988,"down","ITGB1",3688,"0000082 // G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001708 // cell fate specification // inferred from electronic annotation /// 0001894 // tissue homeostasis // inferred from electronic annotation /// 0002042 // cell migration involved in sprouting angiogenesis // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0006968 // cellular defense response // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // traceable author statement /// 0007159 // leukocyte cell-cell adhesion // inferred from direct assay /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from mutant phenotype /// 0007161 // calcium-independent cell-matrix adhesion // inferred from genetic interaction /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008354 // germ cell migration // inferred from electronic annotation /// 0010811 // positive regulation of cell-substrate adhesion // inferred from electronic annotation /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0016477 // cell migration // traceable author statement /// 0030183 // B cell differentiation // inferred by curator /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0031345 // negative regulation of cell projection organization // inferred from electronic annotation /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0032594 // protein transport within lipid bilayer // inferred from electronic annotation /// 0033631 // cell-cell adhesion mediated by integrin // inferred from expression pattern /// 0034329 // cell junction assembly // traceable author statement /// 0034698 // response to gonadotropin stimulus // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from genetic interaction /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045214 // sarcomere organization // inferred from electronic annotation /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045807 // positive regulation of endocytosis // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050776 // regulation of immune response // traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0060135 // maternal process involved in female pregnancy // inferred from electronic annotation /// 0070830 // tight junction assembly // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from electronic annotation /// 0071305 // cellular response to vitamin D // inferred from electronic annotation /// 0071479 // cellular response to ionizing radiation // inferred from electronic annotation /// 0071559 // response to transforming growth factor beta stimulus // inferred from electronic annotation","0001669 // acrosomal vesicle // inferred from electronic annotation /// 0001726 // ruffle // traceable author statement /// 0005604 // basement membrane // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0008305 // integrin complex // non-traceable author statement /// 0008305 // integrin complex // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0014704 // intercalated disc // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030056 // hemidesmosome // inferred from electronic annotation /// 0031594 // neuromuscular junction // inferred from direct assay /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from direct assay /// 0034667 // alpha3-beta1 integrin complex // inferred from electronic annotation /// 0034678 // alpha8-beta1 integrin complex // traceable author statement /// 0034679 // alpha9-beta1 integrin complex // inferred from electronic annotation /// 0035748 // myelin sheath abaxonal region // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from direct assay /// 0042383 // sarcolemma // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation","0001948 // glycoprotein binding // inferred from electronic annotation /// 0001968 // fibronectin binding // inferred from electronic annotation /// 0002020 // protease binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from electronic annotation /// 0005178 // integrin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from electronic annotation /// 0019900 // kinase binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation /// 0043236 // laminin binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // non-traceable author statement /// 0051393 // alpha-actinin binding // inferred from electronic annotation","chr10:33189246-33247155 (-) // 91.17 // p11.22"]
["11754983_s_at",-0.16895676,-0.23441887,-0.21837711,0.22260284,0.16895676,0.2087555,0.00084399927,8.8779445e-5,-1.3262529,-0.40735593,1.3262529,"down","DAZAP1",26528,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007283 // spermatogenesis // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement","chr19:1425264-1435680 (+) // 98.23 // p13.3"]
["11719665_a_at",-0.22250843,-0.13903332,-0.1900711,0.23372269,0.256876,0.13903332,0.0018172208,0.0008233059,-1.3138024,-0.39374828,1.3138024,"down","GFM1",85476,"0006184 // GTP catabolic process // inferred from direct assay /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006412 // translation // inferred from electronic annotation /// 0006414 // translational elongation // inferred from electronic annotation /// 0070125 // mitochondrial translational elongation // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // inferred from direct assay /// 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr3:158362082-158410439 (+) // 96.91 // q25.32"]
["11734004_x_at",-0.25032902,-0.24337578,-0.24549103,0.24337578,0.3202629,0.30624294,0.0005921098,2.2694992e-5,-1.4503078,-0.53635913,1.4503078,"down","TMEM192","162967 /// 201931","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:165997230-166034071 (-) // 71.47 // q32.3"]
["11725637_a_at",-0.2609434,-0.32479,-0.31359196,0.38166046,0.29713058,0.2609434,0.0008942897,0.00011461672,-1.5294574,-0.61301994,1.5294574,"down","EIF3J",8669,"0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred by curator /// 0006413 // translational initiation // traceable author statement /// 0006413 // translational initiation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from direct assay","0003743 // translation initiation factor activity // inferred by curator /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr15:44829254-44855001 (+) // 91.33 // q21.1"]
["11753914_a_at",-0.275949,-0.19302797,-0.24172115,0.30630684,0.20278072,0.19302845,0.0013953822,0.00041306,-1.3860103,-0.47093803,1.3860103,"down","SSX2IP",117178,"0007155 // cell adhesion // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation","chr1:85109066-85156233 (-) // 92.98 // p22.3"]
["11763816_a_at",-0.18139935,-0.24628067,-0.15331459,0.15331459,0.30827618,0.18368912,0.0028598784,0.0017288154,-1.3275427,-0.40875816,1.3275427,"down","EIF3M",10480,"0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred by curator /// 0006413 // translational initiation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from direct assay","0003743 // translation initiation factor activity // inferred by curator /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr11:32605393-32622339 (+) // 84.58 // p13"]
["11758279_s_at",-0.7732172,-0.94277954,-1.0665426,1.0701189,0.7732172,0.84523106,0.0009194498,0.00012195975,-3.539884,-1.8237021,3.539884,"down","CORO1C",23603,"0006909 // phagocytosis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0030036 // actin cytoskeleton organization // not recorded","0015629 // actin cytoskeleton // not recorded /// 0015629 // actin cytoskeleton // traceable author statement","0003779 // actin binding // inferred from electronic annotation /// 0051015 // actin filament binding // not recorded","chr12:109038884-109039675 (-) // 90.41 // q24.11"]
["11747601_a_at",-0.20517159,-0.23556566,-0.242167,0.33396578,0.38894176,0.20517111,0.0016374901,0.000644559,-1.4509465,-0.5369943,1.4509465,"down","SLC25A14",9016,"0006810 // transport // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0006839 // mitochondrial transport // inferred from electronic annotation /// 0009060 // aerobic respiration // traceable author statement","0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005740 // mitochondrial envelope // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","","chrX:129473919-129505571 (+) // 98.62 // q26.1"]
["11738083_s_at",-0.42861462,-0.19885445,-0.29042482,0.2925005,0.31613493,0.19885445,0.0027256683,0.0016163846,-1.4898095,-0.5751279,1.4898095,"down","POC1B",282809,"0005975 // carbohydrate metabolic process // non-traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0016266 // O-glycan processing // traceable author statement /// 0030030 // cell projection organization // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from mutant phenotype /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0000139 // Golgi membrane // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0005813 // centrosome // inferred from direct assay /// 0005814 // centriole // inferred from direct assay /// 0005814 // centriole // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from direct assay /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0004653 // polypeptide N-acetylgalactosaminyltransferase activity // inferred from electronic annotation /// 0004653 // polypeptide N-acetylgalactosaminyltransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr12:89813504-89919801 (-) // 98.04 // q21.33"]
["11756051_a_at",-0.27180958,-0.17656374,-0.24530792,0.17656326,0.3407836,0.21802902,0.0021334826,0.0011126819,-1.3912218,-0.4763524,1.3912218,"down","MTR",4548,"0000096 // sulfur amino acid metabolic process // traceable author statement /// 0006479 // protein methylation // inferred from electronic annotation /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009086 // methionine biosynthetic process // inferred from electronic annotation /// 0032259 // methylation // traceable author statement /// 0032259 // methylation // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042558 // pteridine-containing compound metabolic process // inferred from electronic annotation /// 0044237 // cellular metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046653 // tetrahydrofolate metabolic process // inferred from electronic annotation /// 0050667 // homocysteine metabolic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005542 // folic acid binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008705 // methionine synthase activity // inferred from electronic annotation /// 0008898 // homocysteine S-methyltransferase activity // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0031419 // cobalamin binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:236973859-236992557 (+) // 99.77 // q43"]
["11736447_at",-0.24905777,-0.24178314,-0.30927563,0.24178314,0.2525034,0.25291824,0.0005527764,1.8568715e-5,-1.4297608,-0.5157738,1.4297608,"down","TMPO",7112,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005521 // lamin binding // traceable author statement","chr12:98909407-98928706 (+) // 97.94 // q23.1"]
["11730913_a_at",-0.13847971,-0.16924906,-0.16666031,0.46558237,0.4270749,0.13847971,0.009885796,0.008399947,-1.4160204,-0.501842,1.4160204,"down","ARHGAP12",94134,"0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation","chr10:32095233-32217804 (-) // 98.98 // p11.22"]
["11743343_at",-0.42564774,-0.392591,-0.37138748,0.42682934,0.4749651,0.37138748,0.00055139343,1.7117525e-5,-1.7665519,-0.8209361,1.7665519,"down","RMND5A",64795,"","","","chr2:86947171-87005163 (+) // 98.36 // p11.2"]
["11728191_x_at",-0.14374542,-0.22732067,-0.26251316,0.1999979,0.24015045,0.14374542,0.0018305046,0.00083504117,-1.3248457,-0.40582436,1.3248457,"down","CXCR4",7852,"0000187 // activation of MAPK activity // traceable author statement /// 0001569 // patterning of blood vessels // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from expression pattern /// 0001667 // ameboidal cell migration // inferred from electronic annotation /// 0001764 // neuron migration // inferred from electronic annotation /// 0002407 // dendritic cell chemotaxis // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // traceable author statement /// 0007281 // germ cell development // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from electronic annotation /// 0008354 // germ cell migration // inferred from electronic annotation /// 0009615 // response to virus // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0019059 // initiation of viral infection // traceable author statement /// 0019722 // calcium-mediated signaling // inferred from mutant phenotype /// 0030260 // entry into host cell // traceable author statement /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0042098 // T cell proliferation // inferred from electronic annotation /// 0043217 // myelin maintenance // inferred from sequence or structural similarity /// 0043217 // myelin maintenance // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0048699 // generation of neurons // inferred from electronic annotation /// 0048714 // positive regulation of oligodendrocyte differentiation // inferred from sequence or structural similarity /// 0048714 // positive regulation of oligodendrocyte differentiation // inferred from electronic annotation /// 0050920 // regulation of chemotaxis // inferred from mutant phenotype /// 0061351 // neural precursor cell proliferation // inferred from electronic annotation /// 0070098 // chemokine-mediated signaling pathway // inferred from electronic annotation","0005737 // cytoplasm // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0030426 // growth cone // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from direct assay","0003779 // actin binding // inferred from direct assay /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004950 // chemokine receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015026 // coreceptor activity // traceable author statement /// 0016494 // C-X-C chemokine receptor activity // non-traceable author statement /// 0016494 // C-X-C chemokine receptor activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0032027 // myosin light chain binding // inferred from direct assay /// 0043130 // ubiquitin binding // inferred from direct assay","chr2:136871919-136874273 (-) // 97.21 // q22.1"]
["11725627_at",-0.19221544,-0.24344015,-0.22392797,0.39626217,0.19221544,0.25711536,0.002311554,0.0012682687,-1.415906,-0.5017255,1.415906,"down","NIPAL3",57185,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:24742239-24799473 (+) // 86.99 // p36.11"]
["11720986_at",-0.3259983,-0.26686287,-0.24786663,0.24786663,0.2673607,0.25858307,0.0005959546,2.417038e-5,-1.4521388,-0.5381794,1.4521388,"down","YRDC",79693,"0051051 // negative regulation of transport // inferred from direct assay","0005624 // membrane fraction // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","","chr1:38268616-38273863 (-) // 80.16 // p34.3"]
["11716870_a_at",-0.42831898,-0.3648877,-0.56517076,0.7424779,0.4820571,0.3648877,0.0025672878,0.0014704964,-1.9760234,-0.9826001,1.9760234,"down","PHC2",1912,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0031519 // PcG protein complex // inferred from direct assay /// 0031519 // PcG protein complex // inferred from electronic annotation /// 0035102 // PRC1 complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:33789226-33815498 (-) // 87.37 // p35.1"]
["11734720_a_at",-0.42574406,-0.47454548,-0.5556669,0.50924015,0.47654247,0.42574406,0.0006216412,2.9067676e-5,-1.9396921,-0.9558277,1.9396921,"down","PPAP2C",8612,"0006665 // sphingolipid metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004721 // phosphoprotein phosphatase activity // traceable author statement /// 0008195 // phosphatidate phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr19:281042-291435 (-) // 96.8 // p13.3"]
["11718908_s_at",-0.40435505,-0.46791935,-0.53140736,0.61261654,0.48808098,0.40435505,0.0010089864,0.0001642536,-1.9582679,-0.96957815,1.9582679,"down","CHST2",9435,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006044 // N-acetylglucosamine metabolic process // inferred from direct assay /// 0006790 // sulfur compound metabolic process // inferred from direct assay /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031228 // intrinsic to Golgi membrane // non-traceable author statement","0001517 // N-acetylglucosamine 6-O-sulfotransferase activity // inferred from direct assay /// 0008146 // sulfotransferase activity // traceable author statement /// 0008146 // sulfotransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr3:142838172-142841812 (+) // 94.33 // q24"]
["11726773_a_at",-0.18131351,-0.21503544,-0.20273876,0.40158653,0.29322243,0.18131351,0.002677772,0.0015752957,-1.4061365,-0.4917367,1.4061365,"down","PRKCI",5584,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006612 // protein targeting to membrane // non-traceable author statement /// 0006916 // anti-apoptosis // traceable author statement /// 0007010 // cytoskeleton organization // non-traceable author statement /// 0007015 // actin filament organization // inferred from electronic annotation /// 0010976 // positive regulation of neuron projection development // inferred from mutant phenotype /// 0016044 // cellular membrane organization // non-traceable author statement /// 0016192 // vesicle-mediated transport // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from sequence or structural similarity /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement /// 0034351 // negative regulation of glial cell apoptotic process // inferred from mutant phenotype /// 0035089 // establishment of apical/basal cell polarity // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042462 // eye photoreceptor cell development // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from direct assay /// 0045197 // establishment or maintenance of epithelial cell apical/basal polarity // traceable author statement /// 0045216 // cell-cell junction organization // inferred from mutant phenotype /// 0045216 // cell-cell junction organization // traceable author statement /// 0046326 // positive regulation of glucose import // inferred from sequence or structural similarity /// 0046326 // positive regulation of glucose import // inferred from electronic annotation /// 0046903 // secretion // non-traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0060252 // positive regulation of glial cell proliferation // inferred from mutant phenotype /// 0070830 // tight junction assembly // traceable author statement /// 0090004 // positive regulation of establishment of protein localization in plasma membrane // inferred from sequence or structural similarity /// 0090004 // positive regulation of establishment of protein localization in plasma membrane // inferred from electronic annotation /// 2000353 // positive regulation of endothelial cell apoptotic process // inferred from mutant phenotype","0000133 // polarisome // traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0043220 // Schmidt-Lanterman incisure // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004697 // protein kinase C activity // inferred from sequence or structural similarity /// 0004697 // protein kinase C activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:169940152-170023771 (+) // 91.67 // q26.2"]
["11719490_a_at",-0.31792164,-0.3474579,-0.5207405,0.3556652,0.31792164,0.37704754,0.0013035384,0.00034132274,-1.6766539,-0.74558485,1.6766539,"down","TMEM189","387521 /// 387522","","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr20:48549554-48770271 (-) // 76.75 // q13.13"]
["11727805_a_at",-0.35442495,-0.4142766,-0.44758892,0.35442495,0.48450708,0.4080758,0.0007223185,6.0700248e-5,-1.7667519,-0.82109946,1.7667519,"down","UBE2W",55284,"0006281 // DNA repair // inferred from electronic annotation /// 0006513 // protein monoubiquitination // inferred from direct assay /// 0006513 // protein monoubiquitination // inferred from mutant phenotype /// 0006515 // misfolded or incompletely synthesized protein catabolic process // inferred from sequence or structural similarity /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay /// 0071218 // cellular response to misfolded protein // inferred from sequence or structural similarity","0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // inferred from mutant phenotype /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr8:74702846-74742709 (-) // 93.53 // q21.11"]
["11717399_a_at",-0.258873,-0.17819214,-0.2587204,0.2357235,0.2626953,0.17819214,0.0011442282,0.00023684064,-1.3731275,-0.4574655,1.3731275,"down","TIPARP",25976,"0001570 // vasculogenesis // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0006471 // protein ADP-ribosylation // inferred from electronic annotation /// 0006807 // nitrogen compound metabolic process // inferred from electronic annotation /// 0008209 // androgen metabolic process // inferred from electronic annotation /// 0008210 // estrogen metabolic process // inferred from electronic annotation /// 0008585 // female gonad development // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0044236 // multicellular organismal metabolic process // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0048745 // smooth muscle tissue development // inferred from electronic annotation /// 0060021 // palate development // inferred from electronic annotation /// 0060325 // face morphogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003950 // NAD+ ADP-ribosyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:156392130-156424668 (+) // 96.82 // q25.31"]
["11718399_s_at",-0.27346516,-0.23360062,-0.24606323,0.3848343,0.26976013,0.23360062,0.0012591777,0.00031366711,-1.4611537,-0.547108,1.4611537,"down","TGM2",7052,"0001974 // blood vessel remodeling // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0007200 // phospholipase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0018149 // peptide cross-linking // inferred from electronic annotation /// 0018153 // isopeptide cross-linking via N6-(L-isoglutamyl)-L-lysine // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0043277 // apoptotic cell clearance // inferred from direct assay /// 0045785 // positive regulation of cell adhesion // inferred from sequence or structural similarity /// 0045785 // positive regulation of cell adhesion // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0051482 // elevation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway // inferred from electronic annotation /// 0060445 // branching involved in salivary gland morphogenesis // inferred from electronic annotation /// 0060662 // salivary gland cavitation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation","0003810 // protein-glutamine gamma-glutamyltransferase activity // inferred from sequence or structural similarity /// 0003810 // protein-glutamine gamma-glutamyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:36756862-36793676 (-) // 87.32 // q11.23"]
["11717840_at",-0.45344687,-0.6380682,-0.5083251,0.50793314,0.5273609,0.4534464,0.0007292708,6.348577e-5,-2.041355,-1.029527,2.041355,"down","ETNK1",55500,"0006646 // phosphatidylethanolamine biosynthetic process // inferred from direct assay /// 0006646 // phosphatidylethanolamine biosynthetic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004305 // ethanolamine kinase activity // inferred from direct assay /// 0004305 // ethanolamine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation","chr12:22778008-22843599 (+) // 97.35 // p12.1"]
["11734252_at",-0.3062296,-0.5170517,-0.58246565,0.43157005,0.48750925,0.3062291,0.0019051586,0.00089975516,-1.8365759,-0.87701845,1.8365759,"down","TMEM87A",25963,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr15:42548149-42565755 (-) // 44.79 // q15.1"]
["11754316_a_at",-0.30077744,-0.21110344,-0.2597475,0.32582855,0.24999237,0.21110344,0.0011846017,0.00025720376,-1.4334757,-0.51951754,1.4334757,"down","PIK3R3",8503,"0007596 // blood coagulation // traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0031295 // T cell costimulation // traceable author statement /// 0036092 // phosphatidylinositol-3-phosphate biosynthetic process // traceable author statement /// 0043551 // regulation of phosphatidylinositol 3-kinase activity // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0005942 // phosphatidylinositol 3-kinase complex // inferred from electronic annotation","0016301 // kinase activity // inferred from electronic annotation /// 0016303 // 1-phosphatidylinositol-3-kinase activity // traceable author statement /// 0035014 // phosphatidylinositol 3-kinase regulator activity // inferred from electronic annotation /// 0046935 // 1-phosphatidylinositol-3-kinase regulator activity // inferred from electronic annotation","chr1:46505811-46598467 (-) // 99.54 // p34.1"]
["11742205_a_at",-0.32082987,-0.45978165,-0.46127224,0.52864456,0.40775108,0.32082987,0.0013707393,0.00039669973,-1.7814307,-0.8330364,1.7814307,"down","CCDC68",80323,"","","","chr18:52568741-52625279 (-) // 87.08 // q21.2"]
["11745807_a_at",-0.23413086,-0.37193346,-0.617712,0.31178284,0.26805305,0.23413086,0.005385936,0.0040359725,-1.6013045,-0.67924774,1.6013045,"down","AMMECR1L",83607,"","","","chr2:128619203-128643635 (-) // 96.73 // q14.3"]
["11755223_a_at",-0.50474215,-0.38550568,-0.4986372,0.40867424,0.42619514,0.38550568,0.0006160735,2.7858621e-5,-1.8273505,-0.86975336,1.8273505,"down","JHDM1D",80853,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030901 // midbrain development // inferred from sequence or structural similarity /// 0033169 // histone H3-K9 demethylation // inferred from direct assay /// 0033169 // histone H3-K9 demethylation // inferred from electronic annotation /// 0035574 // histone H4-K20 demethylation // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070544 // histone H3-K36 demethylation // inferred from direct assay /// 0071557 // histone H3-K27 demethylation // inferred from direct assay /// 0071557 // histone H3-K27 demethylation // inferred from electronic annotation","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0005506 // iron ion binding // inferred from direct assay /// 0005506 // iron ion binding // traceable author statement /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from direct assay /// 0032454 // histone demethylase activity (H3-K9 specific) // inferred from direct assay /// 0032454 // histone demethylase activity (H3-K9 specific) // inferred from electronic annotation /// 0035064 // methylated histone residue binding // inferred from direct assay /// 0035575 // histone demethylase activity (H4-K20 specific) // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051864 // histone demethylase activity (H3-K36 specific) // inferred from direct assay /// 0071558 // histone demethylase activity (H3-K27 specific) // inferred from direct assay /// 0071558 // histone demethylase activity (H3-K27 specific) // inferred from electronic annotation","chr7:139784655-139813384 (-) // 93.8 // q34"]
["11729035_at",-0.25453472,-0.29104137,-0.25212955,0.26396656,0.37026215,0.25212955,0.0009735221,0.00014398387,-1.4756541,-0.56135464,1.4756541,"down","ITPRIPL2",162073,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr16:19125271-19132951 (+) // 82.42 // p12.3"]
["11717473_s_at",-0.23962593,-0.18594074,-0.22459984,0.21564484,0.28528547,0.18594122,0.0010769006,0.00018458503,-1.3619553,-0.44567937,1.3619553,"down","IGFBP1",3484,"0001558 // regulation of cell growth // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0042246 // tissue regeneration // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement","0005520 // insulin-like growth factor binding // inferred from electronic annotation /// 0005520 // insulin-like growth factor binding // traceable author statement /// 0019838 // growth factor binding // inferred from electronic annotation","chr7:45927955-45933261 (+) // 94.78 // p12.3"]
["11730939_at",-0.22764492,-0.23496723,-0.22299385,0.24565458,0.34811735,0.22299385,0.001091852,0.00020464629,-1.4149888,-0.5007906,1.4149888,"down","ZBTB8A",653121,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:33004743-33071551 (+) // 73.39 // p35.1"]
["11716903_a_at",-0.44933748,-0.54441977,-0.5109954,0.449337,0.54946613,0.50225735,0.0005467525,1.5305302e-5,-2.0026882,-1.0019377,2.0026882,"down","TGOLN2",10618,"","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030133 // transport vesicle // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr2:85545145-85555407 (-) // 91.76 // p11.2"]
["11724037_at",-0.31471443,-0.34668732,-0.22961521,0.23436546,0.3322487,0.22961521,0.0012584343,0.00031259237,-1.4767396,-0.5624155,1.4767396,"down","PTGS2",5743,"0001516 // prostaglandin biosynthetic process // inferred from sequence or structural similarity /// 0001516 // prostaglandin biosynthetic process // non-traceable author statement /// 0001516 // prostaglandin biosynthetic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006692 // prostanoid metabolic process // traceable author statement /// 0006693 // prostaglandin metabolic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007566 // embryo implantation // inferred from electronic annotation /// 0007613 // memory // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from sequence or structural similarity /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0009750 // response to fructose stimulus // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010042 // response to manganese ion // inferred from electronic annotation /// 0010243 // response to organic nitrogen // inferred from electronic annotation /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from sequence or structural similarity /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0019371 // cyclooxygenase pathway // inferred from direct assay /// 0019371 // cyclooxygenase pathway // inferred from electronic annotation /// 0030282 // bone mineralization // inferred from electronic annotation /// 0030728 // ovulation // inferred from electronic annotation /// 0031394 // positive regulation of prostaglandin biosynthetic process // non-traceable author statement /// 0031622 // positive regulation of fever generation // inferred from sequence or structural similarity /// 0031622 // positive regulation of fever generation // inferred from electronic annotation /// 0031915 // positive regulation of synaptic plasticity // inferred from electronic annotation /// 0032227 // negative regulation of synaptic transmission, dopaminergic // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0033280 // response to vitamin D // inferred from electronic annotation /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042640 // anagen // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from sequence or structural similarity /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from electronic annotation /// 0045907 // positive regulation of vasoconstriction // inferred from electronic annotation /// 0045987 // positive regulation of smooth muscle contraction // inferred from electronic annotation /// 0046697 // decidualization // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050727 // regulation of inflammatory response // non-traceable author statement /// 0050873 // brown fat cell differentiation // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0051926 // negative regulation of calcium ion transport // inferred from electronic annotation /// 0051968 // positive regulation of synaptic transmission, glutamatergic // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from expression pattern /// 0071636 // positive regulation of transforming growth factor beta production // inferred from sequence or structural similarity /// 0071636 // positive regulation of transforming growth factor beta production // inferred from electronic annotation /// 0090050 // positive regulation of cell migration involved in sprouting angiogenesis // inferred from sequence or structural similarity /// 0090050 // positive regulation of cell migration involved in sprouting angiogenesis // inferred from electronic annotation /// 0090271 // positive regulation of fibroblast growth factor production // inferred from sequence or structural similarity /// 0090271 // positive regulation of fibroblast growth factor production // inferred from electronic annotation /// 0090336 // positive regulation of brown fat cell differentiation // inferred from sequence or structural similarity /// 0090336 // positive regulation of brown fat cell differentiation // inferred from electronic annotation /// 0090362 // positive regulation of platelet-derived growth factor production // inferred from sequence or structural similarity /// 0090362 // positive regulation of platelet-derived growth factor production // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005901 // caveola // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043005 // neuron projection // inferred from direct assay /// 0043005 // neuron projection // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0004601 // peroxidase activity // inferred from electronic annotation /// 0004601 // peroxidase activity // non-traceable author statement /// 0004601 // peroxidase activity // traceable author statement /// 0004666 // prostaglandin-endoperoxide synthase activity // inferred from direct assay /// 0004666 // prostaglandin-endoperoxide synthase activity // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0020037 // heme binding // inferred from electronic annotation /// 0020037 // heme binding // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:186640956-186649556 (-) // 95.15 // q31.1"]
["11759599_at",-0.3494811,-0.29730988,-0.44819975,0.32130003,0.33214474,0.2973094,0.0008942897,0.000114727496,-1.6042677,-0.6819149,1.6042677,"down","PNISR",25957,"","0005634 // nucleus // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","","chr6:99856014-99873184 (-) // 89.06 // q16.2"]
["11717703_a_at",-0.2511692,-0.2978239,-0.22525978,0.41199112,0.22525978,0.24928856,0.0018968133,0.0008902827,-1.467741,-0.55359745,1.467741,"down","KIFC3",3801,"0007017 // microtubule-based process // inferred from electronic annotation /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0007030 // Golgi organization // inferred from electronic annotation /// 0007601 // visual perception // traceable author statement /// 0045218 // zonula adherens maintenance // inferred from mutant phenotype /// 0090136 // epithelial cell-cell adhesion // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005871 // kinesin complex // inferred from electronic annotation /// 0005871 // kinesin complex // traceable author statement /// 0005874 // microtubule // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0005915 // zonula adherens // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003777 // microtubule motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation","chr16:57792128-57836439 (-) // 94.84 // q21"]
["11741015_a_at",-0.23296928,-0.19342041,-0.21761131,0.19663048,0.19342041,0.22669601,0.000520106,1.1423517e-5,-1.3381587,-0.4202493,1.3381587,"down","CDCA8",55143,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000089 // mitotic metaphase // inferred from mutant phenotype /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0051276 // chromosome organization // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from direct assay /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0032133 // chromosome passenger complex // inferred from physical interaction /// 0043234 // protein complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr1:38158100-38175389 (+) // 97.19 // p34.3"]
["11743389_s_at",-0.42972088,-0.4603138,-0.29246616,0.29246616,0.49702835,0.38522148,0.001558285,0.0005597365,-1.7239751,-0.78573895,1.7239751,"down","PHTF2",57157,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation","chr7:77428108-77586819 (+) // 97.85 // q11.23"]
["11723957_x_at",-0.2917223,-0.38069487,-0.28757095,0.3247471,0.32120323,0.28757095,0.00067191356,4.1958425e-5,-1.5488204,-0.6311698,1.5488204,"down","LSM5",23658,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006397 // mRNA processing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr7:32525083-32530028 (-) // 71.48 // p14.3"]
["11743452_s_at",-0.17842484,-0.26861858,-0.4025917,0.2299242,0.17842484,0.23125362,0.0029613294,0.001811099,-1.4107013,-0.49641258,1.4107013,"down","CDCA4",55038,"0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","","chr14:105475909-105487425 (-) // 99.84 // q32.33"]
["11728682_at",-0.2825451,-0.24198532,-0.33767605,0.2681713,0.24198532,0.30407333,0.0007578133,7.179971e-5,-1.4730558,-0.55881214,1.4730558,"down","KRR1",11103,"0006364 // rRNA processing // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation","chr12:75891166-75905448 (-) // 84.56 // q21.2"]
["11729516_a_at",-0.3625517,-0.4163046,-0.29869843,0.45908928,0.49367237,0.29869843,0.0013175306,0.00035576732,-1.7127781,-0.7763382,1.7127781,"down","ZNF644",84146,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:91380860-91487921 (-) // 98.54 // p22.2"]
["11738053_x_at",-0.23543167,-0.29757404,-0.33367157,0.23543167,0.34259987,0.26687527,0.0010741793,0.00018365598,-1.485067,-0.57052803,1.485067,"down","PLAUR",5329,"0006501 // C-terminal protein lipidation // traceable author statement /// 0006928 // cellular component movement // non-traceable author statement /// 0006935 // chemotaxis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007596 // blood coagulation // non-traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0016255 // attachment of GPI anchor to protein // traceable author statement /// 0030162 // regulation of proteolysis // non-traceable author statement /// 0042730 // fibrinolysis // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043403 // skeletal muscle tissue regeneration // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0048762 // mesenchymal cell differentiation // inferred from electronic annotation /// 0060742 // epithelial cell differentiation involved in prostate gland development // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0019898 // extrinsic to membrane // traceable author statement /// 0031225 // anchored to membrane // inferred from electronic annotation","0004872 // receptor activity // non-traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0030377 // U-plasminogen activator receptor activity // non-traceable author statement /// 0030377 // U-plasminogen activator receptor activity // inferred from electronic annotation","chr19:44152731-44174699 (-) // 74.81 // q13.31"]
["11724105_a_at",-0.27128267,-0.25768995,-0.2538457,0.2538457,0.39695168,0.39834595,0.0011259156,0.00022401937,-1.5269511,-0.6106539,1.5269511,"down","C8orf44-SGK3","100533105 /// 23678","0001558 // regulation of cell growth // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006950 // response to stress // traceable author statement /// 0007154 // cell communication // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030334 // regulation of cell migration // traceable author statement /// 0042127 // regulation of cell proliferation // traceable author statement /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement","0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005246 // calcium channel regulator activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0015459 // potassium channel regulator activity // traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017080 // sodium channel regulator activity // traceable author statement /// 0017081 // chloride channel regulator activity // traceable author statement /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr8:67624652-67774257 (+) // 83.03 // q13.1"]
["11720043_a_at",-0.36314106,-0.13594532,-0.16098118,0.13594532,0.19219685,0.17210674,0.0077620237,0.0063312976,-1.3074648,-0.38677216,1.3074648,"down","LY6G6E","79136 /// 7920","","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016787 // hydrolase activity // inferred from electronic annotation","chr6:31654734-31671221 (-) // 98.59 // p21.33"]
["11721001_at",-0.644907,-0.27111435,-0.24001741,0.24001694,0.29096794,0.24956131,0.009363397,0.007891545,-1.564312,-0.6455283,1.564312,"down","HEXIM1",10614,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0045736 // negative regulation of cyclin-dependent protein kinase activity // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0004861 // cyclin-dependent protein kinase inhibitor activity // inferred from direct assay /// 0004861 // cyclin-dependent protein kinase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017069 // snRNA binding // inferred from direct assay /// 0017069 // snRNA binding // inferred from electronic annotation","chr17:43224683-43229585 (+) // 92.36 // q21.31"]
["11736741_a_at",-0.24174738,-0.42136288,-0.20320988,0.3182478,0.20321035,0.22142267,0.0033286067,0.002137361,-1.4503492,-0.5364003,1.4503492,"down","MKI67",4288,"0006259 // DNA metabolic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007126 // meiosis // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0034605 // cellular response to heat // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000793 // condensed chromosome // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction","chr10:129894926-129924468 (-) // 98.78 // q26.2"]
["11723386_s_at",-0.19638109,-0.23708391,-0.17520809,0.17520809,0.32062244,0.3586998,0.0021850707,0.0011521206,-1.4022411,-0.4877345,1.4022411,"down","PTAR1",375743,"0018342 // protein prenylation // inferred from electronic annotation","","0004659 // prenyltransferase activity // inferred from electronic annotation /// 0008318 // protein prenyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr9:72324437-72374876 (-) // 92.71 // q21.12"]
["11761013_at",-0.33262205,-0.2568388,-0.14134645,0.18626785,0.14134645,0.16215754,0.0032386743,0.0020517183,-1.3257968,-0.40685973,1.3257968,"down","PCNA",5111,"0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000083 // regulation of transcription involved in G1/S phase of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000278 // mitotic cell cycle // traceable author statement /// 0000722 // telomere maintenance via recombination // traceable author statement /// 0000723 // telomere maintenance // traceable author statement /// 0006260 // DNA replication // non-traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement /// 0006275 // regulation of DNA replication // inferred from electronic annotation /// 0006281 // DNA repair // non-traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006284 // base-excision repair // traceable author statement /// 0006287 // base-excision repair, gap-filling // inferred from electronic annotation /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006297 // nucleotide-excision repair, DNA gap filling // traceable author statement /// 0006298 // mismatch repair // inferred from direct assay /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0019985 // translesion synthesis // inferred from direct assay /// 0032077 // positive regulation of deoxyribonuclease activity // inferred from direct assay /// 0032201 // telomere maintenance via semi-conservative replication // traceable author statement /// 0033993 // response to lipid // inferred from electronic annotation /// 0046686 // response to cadmium ion // inferred from electronic annotation /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement","0000307 // cyclin-dependent protein kinase holoenzyme complex // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005652 // nuclear lamina // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005657 // replication fork // inferred from electronic annotation /// 0005663 // DNA replication factor C complex // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0043596 // nuclear replication fork // inferred from direct assay /// 0043626 // PCNA complex // inferred from electronic annotation /// 0070557 // PCNA-p21 complex // inferred from direct assay","0000701 // purine-specific mismatch base pair DNA N-glycosylase activity // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030337 // DNA polymerase processivity factor activity // inferred from electronic annotation /// 0030971 // receptor tyrosine kinase binding // inferred from physical interaction /// 0032139 // dinucleotide insertion or deletion binding // inferred from direct assay /// 0032405 // MutLalpha complex binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction","chr20:5098598-5100604 (-) // 80.58 // p13"]
["11724762_a_at",-0.18376303,-0.20820808,-0.2393341,0.18376303,0.27795362,0.25075245,0.0010000851,0.00015634406,-1.3640767,-0.4479248,1.3640767,"down","DEPTOR",64798,"0006469 // negative regulation of protein kinase activity // inferred from mutant phenotype /// 0032007 // negative regulation of TOR signaling cascade // inferred from mutant phenotype /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from mutant phenotype /// 0045792 // negative regulation of cell size // inferred from mutant phenotype","0005622 // intracellular // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr8:120885894-121063157 (+) // 96.9 // q24.12"]
["11754547_a_at",-0.4018736,-0.2726946,-0.26883984,0.48205948,0.26883984,0.42793608,0.0017967653,0.0007991335,-1.6328752,-0.7074145,1.6328752,"down","ENOX2",10495,"0006810 // transport // inferred from electronic annotation /// 0007624 // ultradian rhythm // inferred from direct assay /// 0016049 // cell growth // non-traceable author statement /// 0022900 // electron transport chain // inferred from electronic annotation /// 0040008 // regulation of growth // inferred from electronic annotation /// 0048511 // rhythmic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0015035 // protein disulfide oxidoreductase activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation","chrX:129757875-130037208 (-) // 98.15 // q26.1"]
["11716045_s_at",-0.3341751,-0.45510006,-0.3792162,0.54347897,0.3341751,0.35517597,0.0014295598,0.00044389002,-1.7416328,-0.8004405,1.7416328,"down","FAM168B",130074,"","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","","chr2:131805448-131851033 (-) // 98.73 // q21.1"]
["11728797_a_at",-0.77444935,-0.5540991,-0.5832844,0.77926254,0.6349344,0.5540991,0.0010362655,0.0001717347,-2.4510098,-1.2933762,2.4510098,"down","LSM14A",26065,"0006417 // regulation of translation // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0033962 // cytoplasmic mRNA processing body assembly // inferred from direct assay /// 0033962 // cytoplasmic mRNA processing body assembly // inferred from mutant phenotype","0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0010494 // cytoplasmic stress granule // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","","chr19:34663347-34720420 (+) // 97.01 // q13.11"]
["11718942_at",-0.21973515,-0.29149723,-0.35911846,0.21973515,0.4193325,0.3072033,0.0020028213,0.0010039983,-1.5215487,-0.6055406,1.5215487,"down","LSM14B",149986,"0006417 // regulation of translation // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation","0030529 // ribonucleoprotein complex // inferred from electronic annotation","","chr20:60697516-60710430 (+) // 95.52 // q13.33"]
["11724406_a_at",-0.5861378,-0.30849314,-0.54706955,0.50586224,0.4255724,0.30849314,0.0020058425,0.0010063766,-1.8581617,-0.8938761,1.8581617,"down","CCNE1",898,"0000079 // regulation of cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0000082 // G1/S transition of mitotic cell cycle // non-traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000083 // regulation of transcription involved in G1/S phase of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0001547 // antral ovarian follicle growth // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0006270 // DNA-dependent DNA replication initiation // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0010243 // response to organic nitrogen // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014074 // response to purine-containing compound // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0030521 // androgen receptor signaling pathway // non-traceable author statement /// 0031100 // organ regeneration // inferred from electronic annotation /// 0031670 // cellular response to nutrient // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032570 // response to progesterone stimulus // inferred from electronic annotation /// 0033197 // response to vitamin E // inferred from electronic annotation /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045597 // positive regulation of cell differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement /// 0048545 // response to steroid hormone stimulus // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051412 // response to corticosterone stimulus // inferred from electronic annotation /// 0051597 // response to methylmercury // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation","0000307 // cyclin-dependent protein kinase holoenzyme complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003713 // transcription coactivator activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0016538 // cyclin-dependent protein kinase regulator activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0050681 // androgen receptor binding // non-traceable author statement","chr19:30302900-30315219 (+) // 94.61 // q12"]
["11727873_at",-0.75942373,-0.24330759,-0.27306747,0.31559134,0.24330807,0.34909773,0.014202999,0.012875673,-1.6562632,-0.727932,1.6562632,"down","SLC23A3","151295 /// 79840","0006281 // DNA repair // inferred from electronic annotation /// 0006302 // double-strand break repair // inferred from electronic annotation /// 0006303 // double-strand break repair via nonhomologous end joining // inferred from mutant phenotype /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007417 // central nervous system development // non-traceable author statement /// 0010212 // response to ionizing radiation // inferred from direct assay /// 0030183 // B cell differentiation // inferred from mutant phenotype /// 0030217 // T cell differentiation // inferred from mutant phenotype /// 0051351 // positive regulation of ligase activity // non-traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0070419 // nonhomologous end joining complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0005215 // transporter activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr2:219940029-220025953 (-) // 80.76 // q35"]
["11719605_at",-0.22401524,-0.21017456,-0.15709114,0.15709114,0.26248646,0.2966814,0.0017275709,0.0007335852,-1.3527044,-0.43584666,1.3527044,"down","RRN3",54700,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006352 // transcription initiation, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006360 // transcription from RNA polymerase I promoter // traceable author statement /// 0006361 // transcription initiation from RNA polymerase I promoter // traceable author statement /// 0006361 // transcription initiation from RNA polymerase I promoter // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0007000 // nucleolus organization // inferred from electronic annotation /// 0007028 // cytoplasm organization // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0048872 // homeostasis of number of cells // inferred from electronic annotation /// 2000142 // regulation of transcription initiation, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from electronic annotation","0003743 // translation initiation factor activity // inferred from electronic annotation /// 0070063 // RNA polymerase binding // inferred from electronic annotation","chr16:15153878-15188158 (-) // 98.32 // p13.11"]
["11717439_s_at",-0.23496914,-0.1720314,-0.25089264,0.30661583,0.2786646,0.1720314,0.0015777147,0.0005795825,-1.3867762,-0.471735,1.3867762,"down","TOP1P1","7150 /// 7151","0006260 // DNA replication // not recorded /// 0006260 // DNA replication // inferred from electronic annotation /// 0006265 // DNA topological change // not recorded /// 0006265 // DNA topological change // inferred from electronic annotation /// 0006338 // chromatin remodeling // not recorded /// 0007059 // chromosome segregation // not recorded /// 0012501 // programmed cell death // non-traceable author statement /// 0016310 // phosphorylation // non-traceable author statement /// 0040016 // embryonic cleavage // inferred from electronic annotation /// 0042493 // response to drug // inferred from expression pattern /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0000228 // nuclear chromosome // inferred from direct assay /// 0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0031298 // replication fork protection complex // not recorded /// 0043204 // perikaryon // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0003916 // DNA topoisomerase activity // inferred from electronic annotation /// 0003917 // DNA topoisomerase type I activity // inferred from mutant phenotype /// 0003917 // DNA topoisomerase type I activity // inferred from electronic annotation /// 0003918 // DNA topoisomerase (ATP-hydrolyzing) activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation","chr20:39657459-39753124 (+) // 93.96 // q12"]
["11741758_x_at",-0.3761921,-0.5142727,-0.15639114,0.18791723,0.18003559,0.15639114,0.008922414,0.007462243,-1.4376707,-0.52373326,1.4376707,"down","TRPV4",59341,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from direct assay /// 0006816 // calcium ion transport // non-traceable author statement /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from direct assay /// 0006884 // cell volume homeostasis // traceable author statement /// 0006970 // response to osmotic stress // inferred from electronic annotation /// 0006971 // hypotonic response // inferred from electronic annotation /// 0007015 // actin filament organization // inferred from sequence or structural similarity /// 0007015 // actin filament organization // inferred from electronic annotation /// 0007043 // cell-cell junction assembly // inferred from sequence or structural similarity /// 0007043 // cell-cell junction assembly // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from direct assay /// 0007231 // osmosensory signaling pathway // inferred from sequence or structural similarity /// 0007231 // osmosensory signaling pathway // traceable author statement /// 0007231 // osmosensory signaling pathway // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // traceable author statement /// 0010977 // negative regulation of neuron projection development // inferred from sequence or structural similarity /// 0010977 // negative regulation of neuron projection development // inferred from electronic annotation /// 0030103 // vasopressin secretion // inferred from electronic annotation /// 0031117 // positive regulation of microtubule depolymerization // inferred from sequence or structural similarity /// 0031117 // positive regulation of microtubule depolymerization // inferred from electronic annotation /// 0031532 // actin cytoskeleton reorganization // inferred from sequence or structural similarity /// 0031532 // actin cytoskeleton reorganization // inferred from electronic annotation /// 0042538 // hyperosmotic salinity response // inferred from electronic annotation /// 0043622 // cortical microtubule organization // inferred from sequence or structural similarity /// 0043622 // cortical microtubule organization // inferred from electronic annotation /// 0046785 // microtubule polymerization // inferred from sequence or structural similarity /// 0046785 // microtubule polymerization // inferred from electronic annotation /// 0047484 // regulation of response to osmotic stress // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070509 // calcium ion import // inferred from sequence or structural similarity /// 0070509 // calcium ion import // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from direct assay /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation /// 0071476 // cellular hypotonic response // inferred from sequence or structural similarity /// 0071476 // cellular hypotonic response // inferred from electronic annotation","0005881 // cytoplasmic microtubule // inferred from sequence or structural similarity /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005912 // adherens junction // inferred from sequence or structural similarity /// 0005912 // adherens junction // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from sequence or structural similarity /// 0005925 // focal adhesion // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from sequence or structural similarity /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030175 // filopodium // inferred from sequence or structural similarity /// 0030175 // filopodium // inferred from electronic annotation /// 0030426 // growth cone // inferred from sequence or structural similarity /// 0030426 // growth cone // inferred from electronic annotation /// 0030864 // cortical actin cytoskeleton // inferred from sequence or structural similarity /// 0030864 // cortical actin cytoskeleton // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from sequence or structural similarity /// 0032587 // ruffle membrane // inferred from electronic annotation","0003779 // actin binding // inferred from sequence or structural similarity /// 0003779 // actin binding // inferred from electronic annotation /// 0005034 // osmosensor activity // inferred from electronic annotation /// 0005080 // protein kinase C binding // inferred from sequence or structural similarity /// 0005080 // protein kinase C binding // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005261 // cation channel activity // inferred from direct assay /// 0005261 // cation channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from direct assay /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from mutant phenotype /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0008017 // microtubule binding // inferred from sequence or structural similarity /// 0008017 // microtubule binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0042169 // SH2 domain binding // inferred from sequence or structural similarity /// 0042169 // SH2 domain binding // inferred from electronic annotation /// 0043014 // alpha-tubulin binding // inferred from sequence or structural similarity /// 0043014 // alpha-tubulin binding // inferred from electronic annotation /// 0048487 // beta-tubulin binding // inferred from sequence or structural similarity /// 0048487 // beta-tubulin binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from sequence or structural similarity /// 0051015 // actin filament binding // inferred from electronic annotation","chr12:110220893-110271212 (-) // 99.02 // q24.11"]
["11759062_s_at",-0.12713146,-0.39008617,-0.22018051,0.14189243,0.19190216,0.12713146,0.008787523,0.0073418585,-1.3189971,-0.3994414,1.3189971,"down","SIK2",23235,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // inferred from direct assay /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0046626 // regulation of insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0046777 // protein autophosphorylation // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:111473114-111601579 (+) // 96.17 // q23.1"]
["11718631_at",-0.25191307,-0.24331999,-0.19614315,0.33196068,0.23255491,0.19614267,0.0013662435,0.00039282467,-1.3986273,-0.4840115,1.3986273,"down","SERTAD1",29950,"0000079 // regulation of cyclin-dependent protein kinase activity // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr19:40927498-40931932 (-) // 77.95 // q13.2"]
["11759124_at",-0.2853384,-0.17015743,-0.252326,0.17015743,0.25533962,0.19796753,0.001459056,0.00047297773,-1.3601466,-0.44376215,1.3601466,"down","FBXL17",64839,"","","","chr5:107194740-107717111 (-) // 90.93 // q21.3"]
["11720384_at",-0.2877779,-0.30076313,-0.25898552,0.25898552,0.34153843,0.38381386,0.0008497762,9.405361e-5,-1.5269167,-0.61062145,1.5269167,"down","STX6",10228,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006906 // vesicle fusion // inferred from physical interaction /// 0007032 // endosome organization // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0042147 // retrograde transport, endosome to Golgi // inferred from mutant phenotype /// 0048193 // Golgi vesicle transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // traceable author statement /// 0032588 // trans-Golgi network membrane // inferred from sequence or structural similarity /// 0032588 // trans-Golgi network membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005484 // SNAP receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:180941851-180992257 (-) // 97.46 // q25.3"]
["11749560_a_at",-0.1949501,-0.21242332,-0.19999409,0.3628378,0.1949501,0.20903778,0.0020774815,0.0010602134,-1.3736975,-0.45806438,1.3736975,"down","CIAO1",9391,"0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0016226 // iron-sulfur cluster assembly // inferred from genetic interaction","0071817 // MMXD complex // inferred from direct assay","","chr2:96932085-96937823 (+) // 92.47 // q11.2"]
["11758219_x_at",-0.42679882,-0.36092377,-0.36724472,0.36092377,0.53971195,0.4556656,0.0008942897,0.0001145765,-1.7864425,-0.83708954,1.7864425,"down","RRM2",6241,"0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000083 // regulation of transcription involved in G1/S phase of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0006260 // DNA replication // non-traceable author statement /// 0009186 // deoxyribonucleoside diphosphate metabolic process // inferred from electronic annotation /// 0009262 // deoxyribonucleotide metabolic process // inferred from electronic annotation /// 0009263 // deoxyribonucleotide biosynthetic process // inferred from sequence or structural similarity /// 0009263 // deoxyribonucleotide biosynthetic process // inferred from electronic annotation /// 0015949 // nucleobase-containing small molecule interconversion // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051259 // protein oligomerization // inferred from electronic annotation /// 0051290 // protein heterotetramerization // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004748 // ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor // inferred from sequence or structural similarity /// 0004748 // ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor // non-traceable author statement /// 0004748 // ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046914 // transition metal ion binding // inferred from electronic annotation","chr2:10270765-10271538 (+) // 56.38 // p25.1"]
["11727873_at",-0.75942373,-0.24330759,-0.27306747,0.31559134,0.24330807,0.34909773,0.014202999,0.012875673,-1.6562632,-0.727932,1.6562632,"down","NHEJ1","151295 /// 79840","0006281 // DNA repair // inferred from electronic annotation /// 0006302 // double-strand break repair // inferred from electronic annotation /// 0006303 // double-strand break repair via nonhomologous end joining // inferred from mutant phenotype /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007417 // central nervous system development // non-traceable author statement /// 0010212 // response to ionizing radiation // inferred from direct assay /// 0030183 // B cell differentiation // inferred from mutant phenotype /// 0030217 // T cell differentiation // inferred from mutant phenotype /// 0051351 // positive regulation of ligase activity // non-traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0070419 // nonhomologous end joining complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0005215 // transporter activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr2:219940029-220025953 (-) // 80.76 // q35"]
["11760519_at",-0.33815575,-0.33086157,-0.2185049,0.27723742,0.5174484,0.21850538,0.004395149,0.0030966685,-1.5514004,-0.63357115,1.5514004,"down","NSD1",64324,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0001702 // gastrulation with mouth forming second // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0010452 // histone H3-K36 methylation // inferred from direct assay /// 0010452 // histone H3-K36 methylation // inferred from sequence or structural similarity /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016571 // histone methylation // inferred from sequence or structural similarity /// 0016571 // histone methylation // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0034770 // histone H4-K20 methylation // inferred from sequence or structural similarity /// 0034968 // histone lysine methylation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003682 // chromatin binding // inferred from sequence or structural similarity /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003712 // transcription cofactor activity // inferred from direct assay /// 0003712 // transcription cofactor activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from sequence or structural similarity /// 0004872 // receptor activity // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016922 // ligand-dependent nuclear receptor binding // inferred from sequence or structural similarity /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0030331 // estrogen receptor binding // inferred from sequence or structural similarity /// 0042054 // histone methyltransferase activity // inferred from electronic annotation /// 0042799 // histone methyltransferase activity (H4-K20 specific) // inferred from sequence or structural similarity /// 0042974 // retinoic acid receptor binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046965 // retinoid X receptor binding // inferred from sequence or structural similarity /// 0046966 // thyroid hormone receptor binding // inferred from sequence or structural similarity /// 0046975 // histone methyltransferase activity (H3-K36 specific) // inferred from direct assay /// 0046975 // histone methyltransferase activity (H3-K36 specific) // inferred from sequence or structural similarity /// 0050681 // androgen receptor binding // inferred from direct assay","chr5:176560798-176563618 (+) // 98.81 // q35.2"]
["11749766_a_at",-0.31944895,-0.23231983,-0.1996336,0.37690735,0.25686932,0.1996336,0.0021534306,0.0011269418,-1.4421996,-0.52827084,1.4421996,"down","KCNH5",27133,"0000160 // two-component signal transduction system (phosphorelay) // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000155 // two-component sensor activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005249 // voltage-gated potassium channel activity // inferred from electronic annotation /// 0005267 // potassium channel activity // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation","chr14:63416535-63568762 (-) // 90.24 // q23.2"]
["11755010_s_at",-0.37151337,-0.4524579,-0.32944155,0.32944202,0.34247255,0.42924738,0.0008566264,9.5550175e-5,-1.6835715,-0.7515249,1.6835715,"down","POC1B-GALNT4","100528030 /// 8693","0005975 // carbohydrate metabolic process // non-traceable author statement /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0016266 // O-glycan processing // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0004653 // polypeptide N-acetylgalactosaminyltransferase activity // inferred from electronic annotation /// 0004653 // polypeptide N-acetylgalactosaminyltransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr12:89913191-89919975 (-) // 88.57 // q21.33"]
["11715723_s_at",-0.27144814,-0.18968773,-0.18490124,0.29902554,0.31370163,0.18490124,0.0016183598,0.000624728,-1.3959254,-0.48122185,1.3959254,"down","ITM2B",9445,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0042985 // negative regulation of amyloid precursor protein biosynthetic process // inferred from direct assay","0000139 // Golgi membrane // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030660 // Golgi-associated vesicle membrane // inferred from direct assay /// 0031301 // integral to organelle membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0001540 // beta-amyloid binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation","chr13:48807273-48836451 (+) // 86.85 // q14.2"]
["11736612_x_at",-0.23888731,-0.41252756,-0.2000947,0.24899626,0.3203187,0.2000947,0.0030212766,0.0018762621,-1.4542813,-0.5403064,1.4542813,"down","KIAA1432",57589,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr9:5656582-5776555 (+) // 99.51 // p24.1"]
["11724431_at",-0.17058516,-0.11819649,-0.166708,0.11819649,0.2802248,0.38415146,0.007887532,0.0064676404,-1.3311632,-0.41268748,1.3311632,"down","C3orf52",79669,"","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:111805181-111837056 (+) // 94.24 // q13.2"]
["11723903_at",-0.23864555,-0.17494535,-0.16736841,0.16736889,0.4590702,0.21348238,0.008539583,0.007101608,-1.388596,-0.47362694,1.388596,"down","PLEKHG1",57480,"0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation","chr6:150920998-151164799 (+) // 95.06 // q25.1"]
["11741631_a_at",-0.552166,-0.2647791,-0.19824743,0.27288342,0.32513905,0.19824791,0.0076475614,0.0062298547,-1.5197362,-0.6038209,1.5197362,"down","C3orf58",205428,"","0000139 // Golgi membrane // inferred from direct assay /// 0005576 // extracellular region // inferred from electronic annotation /// 0030126 // COPI vesicle coat // inferred from direct assay /// 0030137 // COPI-coated vesicle // inferred from electronic annotation","","chr3:143691922-143711209 (+) // 96.04 // q24"]
["11721803_a_at",-0.29602432,-0.28150177,-0.14951324,0.22548294,0.21076775,0.14951324,0.0021199163,0.0010986277,-1.3543504,-0.4376011,1.3543504,"down","BUB3",9184,"0000070 // mitotic sister chromatid segregation // inferred from electronic annotation /// 0000075 // cell cycle checkpoint // traceable author statement /// 0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007094 // mitotic cell cycle spindle assembly checkpoint // traceable author statement /// 0007126 // meiosis // inferred from electronic annotation /// 0008608 // attachment of spindle microtubules to kinetochore // inferred from direct assay /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051983 // regulation of chromosome segregation // inferred from electronic annotation /// 0071173 // spindle assembly checkpoint // inferred from direct assay /// 0071173 // spindle assembly checkpoint // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005829 // cytosol // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr10:124913759-124924881 (+) // 97.61 // q26.13"]
["11746438_a_at",-0.2531662,-0.4855852,-0.5015421,0.3788042,0.2941885,0.2531662,0.0022647758,0.0012213683,-1.6496395,-0.7221508,1.6496395,"down","SHMT2",6472,"0006544 // glycine metabolic process // inferred from electronic annotation /// 0006545 // glycine biosynthetic process // inferred from electronic annotation /// 0006563 // L-serine metabolic process // inferred from electronic annotation /// 0006564 // L-serine biosynthetic process // inferred from electronic annotation /// 0006730 // one-carbon metabolic process // inferred from direct assay /// 0006730 // one-carbon metabolic process // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0019264 // glycine biosynthetic process from serine // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0035999 // tetrahydrofolate interconversion // inferred from electronic annotation /// 0051289 // protein homotetramerization // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from direct assay /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0042645 // mitochondrial nucleoid // inferred from direct assay /// 0042645 // mitochondrial nucleoid // inferred from electronic annotation","0003682 // chromatin binding // inferred from direct assay /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004372 // glycine hydroxymethyltransferase activity // inferred from direct assay /// 0004372 // glycine hydroxymethyltransferase activity // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008732 // L-allo-threonine aldolase activity // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation","chr12:57623885-57628717 (+) // 94.51 // q13.3"]
["11723272_at",-0.1818614,-0.1258111,-0.1522255,0.39152956,0.29494238,0.1258111,0.0073021553,0.005901476,-1.3416983,-0.42406034,1.3416983,"down","FEM1C",56929,"0016567 // protein ubiquitination // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","","chr5:114856604-114880616 (-) // 95.83 // q22.3"]
["11720297_at",-0.1297617,-0.16066122,-0.18816996,0.33946228,0.37873936,0.12976217,0.006375258,0.005024428,-1.358661,-0.44218558,1.358661,"down","PLEKHF2",79666,"","0030133 // transport vesicle // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:96145948-96169002 (+) // 96.6 // q22.1"]
["11725462_at",-0.2843399,-0.45367622,-0.32621765,0.5341368,0.35144806,0.2843399,0.0022204556,0.0011817376,-1.6756485,-0.7447195,1.6756485,"down","MAU2",23383,"0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0034088 // maintenance of mitotic sister chromatid cohesion // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0032116 // SMC loading complex // inferred from direct assay /// 0032116 // SMC loading complex // inferred from mutant phenotype","0005515 // protein binding // inferred from physical interaction /// 0047485 // protein N-terminus binding // inferred from physical interaction","chr19:19431622-19469562 (+) // 94.36 // p13.11"]
["11744146_x_at",-0.1339302,-0.18294144,-0.16920567,0.513484,0.36493397,0.1339302,0.012372165,0.010954854,-1.4136992,-0.49947518,1.4136992,"down","RBM3",5935,"0006396 // RNA processing // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from sequence or structural similarity /// 0006950 // response to stress // inferred from electronic annotation /// 0009409 // response to cold // inferred from electronic annotation /// 0035196 // production of miRNAs involved in gene silencing by miRNA // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from sequence or structural similarity /// 0045727 // positive regulation of translation // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015934 // large ribosomal subunit // inferred from sequence or structural similarity /// 0015934 // large ribosomal subunit // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0043023 // ribosomal large subunit binding // inferred from electronic annotation","chrX:48432742-48436958 (+) // 73.0 // p11.23"]
["11722715_at",-0.36523533,-0.39843845,-0.2752819,0.6725097,0.6053724,0.27528238,0.0037470036,0.0025222078,-1.8201281,-0.86404,1.8201281,"down","STK35",140901,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr20:2082676-2129201 (+) // 97.4 // p13"]
["11747560_a_at",-0.39040422,-0.5056901,-0.5765915,0.67260456,0.43590212,0.39040422,0.0016431456,0.0006520507,-1.986918,-0.9905323,1.986918,"down","RPS6KB2",6199,"0006412 // translation // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0045948 // positive regulation of translational initiation // inferred from mutant phenotype /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004711 // ribosomal protein S6 kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation","chr11:67195933-67202815 (+) // 85.87 // q13.2"]
["11743297_a_at",-0.6130514,-0.35313988,-0.38241863,0.35313988,0.43229198,0.47432327,0.0016202792,0.00062975136,-1.8269726,-0.86945504,1.8269726,"down","CNOT6",57472,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003723 // RNA binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0004535 // poly(A)-specific ribonuclease activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:179921403-180005404 (+) // 97.37 // q35.3"]
["11717871_s_at",-0.39853,-0.25133133,-0.39382744,0.27023888,0.25133133,0.26272297,0.0011434965,0.00023310918,-1.5255477,-0.6093273,1.5255477,"down","KANK2",25959,"","","","chr19:11274945-11308224 (-) // 87.01 // p13.2"]
["11756238_s_at",-0.19629669,-0.23651886,-0.3135376,0.22488785,0.19629669,0.23570824,0.0010998568,0.00021028184,-1.3829497,-0.46774864,1.3829497,"down","SLC2A1",6513,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006970 // response to osmotic stress // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0015758 // glucose transport // traceable author statement /// 0015758 // glucose transport // inferred from electronic annotation /// 0019852 // L-ascorbic acid metabolic process // traceable author statement /// 0042149 // cellular response to glucose starvation // inferred from electronic annotation /// 0042908 // xenobiotic transport // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070837 // dehydroascorbic acid transport // inferred from electronic annotation","0001939 // female pronucleus // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005901 // caveola // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0031982 // vesicle // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0005355 // glucose transmembrane transporter activity // traceable author statement /// 0005355 // glucose transmembrane transporter activity // inferred from electronic annotation /// 0019900 // kinase binding // inferred from electronic annotation /// 0022857 // transmembrane transporter activity // inferred from electronic annotation /// 0022891 // substrate-specific transmembrane transporter activity // inferred from electronic annotation /// 0033300 // dehydroascorbic acid transporter activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042910 // xenobiotic transporter activity // inferred from electronic annotation /// 0055056 // D-glucose transmembrane transporter activity // inferred from electronic annotation","chr1:43391826-43392503 (-) // 87.48 // p34.2"]
["11716955_s_at",-0.17792606,-0.30126572,-0.34510326,0.25468826,0.17792606,0.19666481,0.0019320704,0.0009239124,-1.3991249,-0.48452473,1.3991249,"down","CTDSP2",10106,"0006470 // protein dephosphorylation // inferred from direct assay /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement","0005625 // soluble fraction // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0008420 // CTD phosphatase activity // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:58213255-58240747 (-) // 94.28 // q14.1"]
["11718279_at",-0.15950489,-0.28744793,-0.2869463,0.21397877,0.2060566,0.15950489,0.0016656929,0.0006707247,-1.3545495,-0.4378131,1.3545495,"down","RPRD1B",58490,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0010564 // regulation of cell cycle process // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0070940 // dephosphorylation of RNA polymerase II C-terminal domain // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0016591 // DNA-directed RNA polymerase II, holoenzyme // inferred from direct assay","0000993 // RNA polymerase II core binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr20:36661863-36720768 (+) // 99.1 // q11.23"]
["11734928_x_at",-0.63797283,-0.40692186,-0.66217375,0.40692234,0.6472864,0.60054207,0.0014996352,0.000517316,-2.1743834,-1.1206064,2.1743834,"down","BPNT1",10380,"0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation /// 0050427 // 3'-phosphoadenosine 5'-phosphosulfate metabolic process // traceable author statement","0005829 // cytosol // traceable author statement","0000287 // magnesium ion binding // inferred from electronic annotation /// 0008441 // 3'(2'),5'-bisphosphate nucleotidase activity // inferred from electronic annotation /// 0008441 // 3'(2'),5'-bisphosphate nucleotidase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:220230823-220263785 (-) // 71.03 // q41"]
["11730420_at",-0.15733767,-0.1603136,-0.16420698,0.39272118,0.15733767,0.2653165,0.00444491,0.0031441175,-1.3494871,-0.4324112,1.3494871,"down","FLVCR1",28982,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0015886 // heme transport // inferred from direct assay /// 0030218 // erythrocyte differentiation // inferred from electronic annotation /// 0035108 // limb morphogenesis // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0046620 // regulation of organ growth // inferred from electronic annotation /// 0048536 // spleen development // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0060323 // head morphogenesis // inferred from electronic annotation /// 0097037 // heme export // inferred from mutant phenotype","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005215 // transporter activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0015232 // heme transporter activity // inferred from direct assay /// 0015232 // heme transporter activity // inferred from mutant phenotype","chr1:213031596-213070274 (+) // 94.67 // q32.3"]
["11734026_at",-0.2640648,-0.3562045,-0.4246993,0.2640648,0.88487244,0.40566444,0.012414877,0.011008713,-1.823264,-0.86652344,1.823264,"down","ZNF440",126070,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:11925098-11946425 (+) // 76.8 // p13.2"]
["11735177_at",-0.24162006,-0.16669178,-0.26961756,0.40838623,0.18148327,0.16669178,0.0060407864,0.004711397,-1.3929694,-0.47816357,1.3929694,"down","HAL",3034,"0006547 // histidine metabolic process // inferred from electronic annotation /// 0006548 // histidine catabolic process // traceable author statement /// 0006548 // histidine catabolic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0019556 // histidine catabolic process to glutamate and formamide // inferred from electronic annotation /// 0019557 // histidine catabolic process to glutamate and formate // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004397 // histidine ammonia-lyase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016841 // ammonia-lyase activity // inferred from electronic annotation","chr12:96366885-96390143 (-) // 99.02 // q23.1"]
["11733161_a_at",-0.39720488,-0.3617444,-0.4049616,0.61834717,0.65502644,0.3617444,0.001558285,0.0005599141,-1.9092548,-0.9330096,1.9092548,"down","TNFAIP8",25816,"0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0019987 // negative regulation of anti-apoptosis // inferred from mutant phenotype /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0043027 // cysteine-type endopeptidase inhibitor activity involved in apoptotic process // inferred from mutant phenotype","chr5:118604386-118730293 (+) // 97.56 // q23.1"]
["11754183_s_at",-0.40944147,-0.5674739,-0.40764523,0.6006861,0.54948807,0.4076457,0.0011434965,0.00023441185,-1.9735506,-0.9807935,1.9735506,"down","HMGB3",3149,"0006310 // DNA recombination // inferred from sequence or structural similarity /// 0007275 // multicellular organismal development // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from sequence or structural similarity /// 0008301 // DNA binding, bending // inferred from sequence or structural similarity /// 0008301 // DNA binding, bending // traceable author statement","chrX:150151762-150159246 (+) // 87.43 // q28"]
["11729146_a_at",-0.23597622,-0.19745159,-0.17503452,0.17503452,0.34639072,0.25240612,0.0019427151,0.0009391086,-1.376271,-0.46076456,1.376271,"down","HNRNPD",3184,"0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006396 // RNA processing // traceable author statement /// 0006401 // RNA catabolic process // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0043488 // regulation of mRNA stability // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement /// 0048255 // mRNA stabilization // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030530 // heterogeneous nuclear ribonucleoprotein complex // non-traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042162 // telomeric DNA binding // inferred from direct assay","chr4:83274213-83295505 (-) // 93.28 // q21.22"]
["11723629_a_at",-0.24177217,-0.21442413,-0.21226692,0.3133669,0.21226692,0.27174473,0.00084399927,9.268726e-5,-1.4030962,-0.4886139,1.4030962,"down","TAF1",6872,"0000080 // G1 phase of mitotic cell cycle // inferred from genetic interaction /// 0000117 // regulation of transcription involved in G2/M-phase of mitotic cell cycle // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006352 // transcription initiation, DNA-dependent // inferred from sequence or structural similarity /// 0006352 // transcription initiation, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred by curator /// 0007049 // cell cycle // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016573 // histone acetylation // inferred from direct assay /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0018107 // peptidyl-threonine phosphorylation // inferred from direct assay /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // traceable author statement /// 0051123 // RNA polymerase II transcriptional preinitiation complex assembly // inferred from sequence or structural similarity /// 0060261 // positive regulation of transcription initiation from RNA polymerase II promoter // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005669 // transcription factor TFIID complex // inferred from direct assay /// 0005669 // transcription factor TFIID complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0071339 // MLL1 complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0002039 // p53 binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0004402 // histone acetyltransferase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0017025 // TBP-class protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from sequence or structural similarity /// 0044212 // transcription regulatory region DNA binding // inferred from sequence or structural similarity /// 0070577 // histone acetyl-lysine binding // inferred from direct assay","chrX:70586113-70685855 (+) // 87.96 // q13.1"]
["11732859_a_at",-0.2504344,-0.19522715,-0.20063734,0.19522715,0.26502752,0.2606454,0.00084399927,9.0722184e-5,-1.3714794,-0.45573297,1.3714794,"down","DNHD1",144132,"0007018 // microtubule-based movement // inferred from electronic annotation","0030286 // dynein complex // inferred from electronic annotation","0003777 // microtubule motor activity // inferred from electronic annotation","chr11:6518529-6542096 (+) // 99.37 // p15.4"]
["11718524_a_at",-0.39621353,-0.39708805,-0.4164896,0.40508556,0.39621353,0.3967352,3.76817e-5,3.9160923e-8,-1.744252,-0.8026085,1.744252,"down","NIPA2",81614,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015693 // magnesium ion transport // inferred from electronic annotation","0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr15:23004684-23034427 (-) // 95.02 // q11.2"]
["11734801_a_at",-0.24528933,-0.39659262,-0.35242605,0.3130746,0.29045868,0.2452898,0.0011437805,0.00023545524,-1.5308968,-0.614377,1.5308968,"down","WIPI2",26100,"0000045 // autophagic vacuole assembly // inferred from mutant phenotype /// 0000046 // autophagic vacuole fusion // inferred from mutant phenotype /// 0006914 // autophagy // inferred from electronic annotation","0000421 // autophagic vacuole membrane // not recorded /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005776 // autophagic vacuole // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0034045 // pre-autophagosomal structure membrane // inferred from direct assay /// 0034045 // pre-autophagosomal structure membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0032266 // phosphatidylinositol-3-phosphate binding // inferred from direct assay /// 0080025 // phosphatidylinositol-3,5-bisphosphate binding // inferred from direct assay","chr7:5229818-5273485 (+) // 93.48 // p22.1"]
["11749567_a_at",-0.21837902,-0.21629333,-0.18534279,0.22435856,0.25867653,0.18534279,0.00070557836,5.4759355e-5,-1.3467335,-0.42946434,1.3467335,"down","DDX55",57696,"","","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr12:124086660-124103536 (+) // 98.68 // q24.31"]
["11733551_at",-0.4957385,-0.18954945,-0.23345184,0.25689888,0.18954945,0.21924257,0.007022509,0.005640387,-1.4420724,-0.5281436,1.4420724,"down","ZIC5",85416,"0001843 // neural tube closure // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr13:100615218-100624178 (-) // 95.27 // q32.3"]
["11757836_s_at",-0.6539173,-0.5572586,-0.43369913,0.5961151,0.776371,0.43369865,0.0016134917,0.00061426644,-2.2196822,-1.1503532,2.2196822,"down","SEC24A",10802,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // non-traceable author statement /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0048208 // COPII vesicle coating // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030127 // COPII vesicle coat // non-traceable author statement /// 0030127 // COPII vesicle coat // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation","chr5:134062919-134063601 (+) // 97.98 // q31.1"]
["11727196_a_at",-0.20917273,-0.14985466,-0.26458263,0.22811127,0.22049761,0.14985466,0.0016010772,0.00060102716,-1.3262547,-0.40735787,1.3262547,"down","ZNF202",7753,"0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006629 // lipid metabolic process // traceable author statement /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:123594634-123612381 (-) // 98.66 // q24.1"]
["11742924_a_at",-1.1419992,-1.2229347,-1.2168207,1.1634579,1.1419992,1.1633892,6.045441e-5,1.0414197e-7,-5.09895,-2.3502002,5.09895,"down","PRDX1",5052,"0001501 // skeletal system development // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0042744 // hydrogen peroxide catabolic process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation","0004601 // peroxidase activity // inferred from direct assay /// 0004601 // peroxidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008379 // thioredoxin peroxidase activity // inferred from direct assay /// 0016209 // antioxidant activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0051920 // peroxiredoxin activity // inferred from electronic annotation","chr1:45976713-45987609 (-) // 91.21 // p34.1"]
["11717417_s_at",-0.33986998,-0.4119444,-0.47739697,0.47165394,0.43430042,0.3398695,0.0009194498,0.00012193339,-1.7715495,-0.82501173,1.7715495,"down","RHOU",58480,"0000082 // G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from mutant phenotype /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0016601 // Rac protein signal transduction // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0002102 // podosome // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:228870823-228882416 (+) // 91.44 // q42.13"]
["11716191_at",-0.29690123,-0.31460714,-0.40135622,0.4963522,0.4538126,0.2969017,0.0013662435,0.00039304508,-1.6856563,-0.7533104,1.6856563,"down","C15orf44",81556,"","0005737 // cytoplasm // inferred from direct assay","","chr15:65871094-65903486 (-) // 98.53 // q22.31"]
["11725719_s_at",-0.37294006,-0.42574358,-0.25850868,0.34381485,0.33089352,0.25850868,0.0012237608,0.0002914469,-1.5838875,-0.6634698,1.5838875,"down","CDC42",998,"0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0003334 // keratinocyte development // inferred from electronic annotation /// 0006184 // GTP catabolic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0007030 // Golgi organization // inferred from sequence or structural similarity /// 0007088 // regulation of mitosis // inferred from electronic annotation /// 0007097 // nuclear migration // inferred from electronic annotation /// 0007163 // establishment or maintenance of cell polarity // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030225 // macrophage differentiation // traceable author statement /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0031274 // positive regulation of pseudopodium assembly // inferred from direct assay /// 0031295 // T cell costimulation // traceable author statement /// 0031333 // negative regulation of protein complex assembly // inferred from physical interaction /// 0031424 // keratinization // inferred from electronic annotation /// 0031647 // regulation of protein stability // inferred from electronic annotation /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from electronic annotation /// 0034332 // adherens junction organization // inferred from electronic annotation /// 0034613 // cellular protein localization // inferred from electronic annotation /// 0035088 // establishment or maintenance of apical/basal cell polarity // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0042176 // regulation of protein catabolic process // inferred from electronic annotation /// 0042692 // muscle cell differentiation // traceable author statement /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0043497 // regulation of protein heterodimerization activity // inferred from electronic annotation /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0045859 // regulation of protein kinase activity // inferred from electronic annotation /// 0046330 // positive regulation of JNK cascade // inferred from electronic annotation /// 0046847 // filopodium assembly // inferred from electronic annotation /// 0048664 // neuron fate determination // inferred from electronic annotation /// 0048730 // epidermis morphogenesis // inferred from electronic annotation /// 0051017 // actin filament bundle assembly // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051149 // positive regulation of muscle cell differentiation // traceable author statement /// 0051246 // regulation of protein metabolic process // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051489 // regulation of filopodium assembly // inferred from direct assay /// 0051647 // nucleus localization // inferred from electronic annotation /// 0051683 // establishment of Golgi localization // inferred from sequence or structural similarity /// 0051988 // regulation of attachment of spindle microtubules to kinetochore // inferred from mutant phenotype /// 0060070 // canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0060684 // epithelial-mesenchymal cell signaling // inferred from electronic annotation /// 0060789 // hair follicle placode formation // inferred from electronic annotation /// 0071338 // positive regulation of hair follicle cell proliferation // inferred from electronic annotation /// 0071777 // positive regulation of cell cycle cytokinesis // inferred from mutant phenotype /// 0072384 // organelle transport along microtubule // inferred from sequence or structural similarity /// 0090136 // epithelial cell-cell adhesion // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0000139 // Golgi membrane // inferred from sequence or structural similarity /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030141 // secretory granule // inferred from electronic annotation /// 0030175 // filopodium // inferred from direct assay /// 0030496 // midbody // inferred from direct assay /// 0030496 // midbody // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from direct assay /// 0043025 // neuronal cell body // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation /// 0051233 // spindle midzone // inferred from direct assay /// 0071944 // cell periphery // inferred from electronic annotation /// 0072686 // mitotic spindle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from direct assay /// 0019901 // protein kinase binding // inferred from physical interaction /// 0030742 // GTP-dependent protein binding // inferred from electronic annotation /// 0031435 // mitogen-activated protein kinase kinase kinase binding // inferred from electronic annotation /// 0031996 // thioesterase binding // inferred from physical interaction","chr1:22379119-22417580 (+) // 99.67 // p36.12"]
["11718528_a_at",-0.34321976,-0.23713493,-0.23962784,0.3955469,0.3121891,0.23713493,0.0014996352,0.00051700755,-1.5034579,-0.5882845,1.5034579,"down","TOR3A",64222,"0051085 // chaperone mediated protein folding requiring cofactor // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation","chr1:179051111-179065131 (+) // 89.15 // q25.2"]
["11756603_a_at",-0.23426342,-0.21844387,-0.32027626,0.30376434,0.21844387,0.32995892,0.0012387263,0.00030258892,-1.4557039,-0.54171693,1.4557039,"down","FAM206A",54942,"0006546 // glycine catabolic process // inferred from electronic annotation","0005960 // glycine cleavage complex // inferred from electronic annotation","","chr9:111696722-111703232 (+) // 80.89 // q31.3"]
["11724105_a_at",-0.27128267,-0.25768995,-0.2538457,0.2538457,0.39695168,0.39834595,0.0011259156,0.00022401937,-1.5269511,-0.6106539,1.5269511,"down","SGK3","100533105 /// 23678","0001558 // regulation of cell growth // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006950 // response to stress // traceable author statement /// 0007154 // cell communication // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030334 // regulation of cell migration // traceable author statement /// 0042127 // regulation of cell proliferation // traceable author statement /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement","0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005246 // calcium channel regulator activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0015459 // potassium channel regulator activity // traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017080 // sodium channel regulator activity // traceable author statement /// 0017081 // chloride channel regulator activity // traceable author statement /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr8:67624652-67774257 (+) // 83.03 // q13.1"]
["11723243_at",-0.3106041,-0.43904114,-0.33257675,0.46432686,0.3691578,0.3106041,0.0011555209,0.0002428485,-1.6726129,-0.7421036,1.6726129,"down","CDK6",1021,"0000080 // G1 phase of mitotic cell cycle // inferred from expression pattern /// 0000080 // G1 phase of mitotic cell cycle // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0001954 // positive regulation of cell-matrix adhesion // inferred from direct assay /// 0003323 // type B pancreatic cell development // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0009615 // response to virus // inferred from expression pattern /// 0010468 // regulation of gene expression // inferred from direct assay /// 0010468 // regulation of gene expression // inferred from mutant phenotype /// 0014002 // astrocyte development // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation /// 0021542 // dentate gyrus development // inferred from sequence or structural similarity /// 0021670 // lateral ventricle development // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042063 // gliogenesis // inferred from mutant phenotype /// 0043697 // cell dedifferentiation // inferred from mutant phenotype /// 0045596 // negative regulation of cell differentiation // traceable author statement /// 0045638 // negative regulation of myeloid cell differentiation // inferred from direct assay /// 0045646 // regulation of erythrocyte differentiation // inferred from mutant phenotype /// 0045668 // negative regulation of osteoblast differentiation // inferred from direct assay /// 0045786 // negative regulation of cell cycle // inferred from direct assay /// 0048146 // positive regulation of fibroblast proliferation // inferred from mutant phenotype /// 0048699 // generation of neurons // inferred from sequence or structural similarity /// 0050680 // negative regulation of epithelial cell proliferation // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation /// 2000145 // regulation of cell motility // inferred from sequence or structural similarity /// 2000773 // negative regulation of cellular senescence // inferred from direct assay","0000307 // cyclin-dependent protein kinase holoenzyme complex // inferred from direct assay /// 0001726 // ruffle // inferred from direct assay /// 0001726 // ruffle // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004693 // cyclin-dependent protein kinase activity // inferred from direct assay /// 0004693 // cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0030332 // cyclin binding // inferred from physical interaction","chr7:92234234-92465908 (-) // 97.26 // q21.2"]
["11745154_a_at",-0.17876816,-0.21496105,-0.2181673,0.25029945,0.33360767,0.17876816,0.0015928574,0.0005945549,-1.3738177,-0.45819062,1.3738177,"down","NCL",4691,"0001525 // angiogenesis // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005730 // nucleolus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005938 // cell cortex // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0042162 // telomeric DNA binding // inferred from direct assay","chr2:232319618-232329211 (-) // 90.65 // q37.1"]
["11716962_a_at",-0.1834569,-0.16374588,-0.17748928,0.24175692,0.16374588,0.31016302,0.0016241793,0.0006365216,-1.3318694,-0.41345263,1.3318694,"down","PPM1F",9647,"0006469 // negative regulation of protein kinase activity // inferred from direct assay /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0010634 // positive regulation of epithelial cell migration // inferred from mutant phenotype /// 0010811 // positive regulation of cell-substrate adhesion // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0033137 // negative regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0035690 // cellular response to drug // inferred from direct assay /// 0035970 // peptidyl-threonine dephosphorylation // inferred from direct assay /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0044387 // negative regulation of protein kinase activity by regulation of protein phosphorylation // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045927 // positive regulation of growth // inferred from mutant phenotype /// 0050921 // positive regulation of chemotaxis // inferred from mutant phenotype /// 0051496 // positive regulation of stress fiber assembly // inferred from direct assay /// 0051496 // positive regulation of stress fiber assembly // inferred from mutant phenotype /// 0051894 // positive regulation of focal adhesion assembly // inferred from mutant phenotype /// 0097193 // intrinsic apoptotic signaling pathway // inferred from direct assay","0005829 // cytosol // inferred from direct assay /// 0008287 // protein serine/threonine phosphatase complex // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0003824 // catalytic activity // inferred from electronic annotation /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // inferred from direct assay /// 0004722 // protein serine/threonine phosphatase activity // inferred from mutant phenotype /// 0004722 // protein serine/threonine phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from direct assay /// 0033192 // calmodulin-dependent protein phosphatase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr22:22273805-22307250 (-) // 98.2 // q11.22"]
["11752090_a_at",-0.33749056,-0.2993636,-0.30777216,0.507998,0.5724435,0.2993636,0.0017398865,0.0007406382,-1.7109653,-0.7748105,1.7109653,"down","PPM1D",8493,"0000086 // G2/M transition of mitotic cell cycle // inferred from electronic annotation /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006470 // protein dephosphorylation // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0009314 // response to radiation // traceable author statement /// 0009617 // response to bacterium // inferred from electronic annotation /// 0035970 // peptidyl-threonine dephosphorylation // inferred from direct assay","0005634 // nucleus // traceable author statement /// 0008287 // protein serine/threonine phosphatase complex // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // inferred from direct assay /// 0004722 // protein serine/threonine phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:58677629-58741834 (+) // 95.7 // q23.2"]
["11728218_a_at",-0.19862556,-0.26617336,-0.25531006,0.73206043,0.61149025,0.19862556,0.011204943,0.009805531,-1.6865734,-0.7540951,1.6865734,"down","BCLAF1",9774,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043620 // regulation of DNA-dependent transcription in response to stress // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // traceable author statement /// 2000144 // positive regulation of transcription initiation, DNA-dependent // inferred from mutant phenotype /// 2001022 // positive regulation of response to DNA damage stimulus // inferred from mutant phenotype /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:136578002-136610989 (-) // 98.9 // q23.3"]
["11731268_a_at",-0.33274746,-0.46324587,-0.5118089,0.39346123,0.37898064,0.3327484,0.0009735221,0.00014151672,-1.7463356,-0.8043308,1.7463356,"down","NUP98",4928,"0000059 // protein import into nucleus, docking // non-traceable author statement /// 0000059 // protein import into nucleus, docking // traceable author statement /// 0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006260 // DNA replication // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // traceable author statement /// 0006999 // nuclear pore organization // non-traceable author statement /// 0008645 // hexose transport // traceable author statement /// 0010827 // regulation of glucose transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0000776 // kinetochore // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // traceable author statement /// 0005643 // nuclear pore // inferred from direct assay /// 0005643 // nuclear pore // non-traceable author statement /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031080 // nuclear pore outer ring // inferred from direct assay /// 0031080 // nuclear pore outer ring // non-traceable author statement /// 0031965 // nuclear membrane // inferred from electronic annotation","0005215 // transporter activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0017056 // structural constituent of nuclear pore // non-traceable author statement","chr11:3732785-3818892 (-) // 97.49 // p15.4"]
["11755010_s_at",-0.37151337,-0.4524579,-0.32944155,0.32944202,0.34247255,0.42924738,0.0008566264,9.5550175e-5,-1.6835715,-0.7515249,1.6835715,"down","GALNT4","100528030 /// 8693","0005975 // carbohydrate metabolic process // non-traceable author statement /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0016266 // O-glycan processing // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0004653 // polypeptide N-acetylgalactosaminyltransferase activity // inferred from electronic annotation /// 0004653 // polypeptide N-acetylgalactosaminyltransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr12:89913191-89919975 (-) // 88.57 // q21.33"]
["11748793_a_at",-0.43861103,-0.40426636,-0.47988415,0.40426636,0.43522453,0.4389906,0.00035482424,3.786669e-6,-1.8239688,-0.867081,1.8239688,"down","ASNS",440,"0001889 // liver development // inferred from electronic annotation /// 0006520 // cellular amino acid metabolic process // inferred from electronic annotation /// 0006529 // asparagine biosynthetic process // inferred by curator /// 0006529 // asparagine biosynthetic process // inferred from direct assay /// 0006529 // asparagine biosynthetic process // inferred from electronic annotation /// 0006541 // glutamine metabolic process // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // traceable author statement /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009416 // response to light stimulus // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009636 // response to toxin // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0031427 // response to methotrexate // inferred from electronic annotation /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0032354 // response to follicle-stimulating hormone stimulus // inferred from electronic annotation /// 0032870 // cellular response to hormone stimulus // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042149 // cellular response to glucose starvation // inferred from direct assay /// 0042149 // cellular response to glucose starvation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043200 // response to amino acid stimulus // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045931 // positive regulation of mitotic cell cycle // inferred from direct assay /// 0070981 // L-asparagine biosynthetic process // inferred from electronic annotation","0005625 // soluble fraction // inferred from direct assay /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004066 // asparagine synthase (glutamine-hydrolyzing) activity // not recorded /// 0004066 // asparagine synthase (glutamine-hydrolyzing) activity // inferred from direct assay /// 0004066 // asparagine synthase (glutamine-hydrolyzing) activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0048037 // cofactor binding // inferred from electronic annotation","chr7:97481515-97501764 (-) // 99.51 // q21.3"]
["11736001_s_at",-0.21947002,-0.29277134,-0.3119912,0.35142326,0.2280035,0.21947002,0.0014353773,0.0004506417,-1.4550241,-0.5410431,1.4550241,"down","DCN",1634,"0001822 // kidney development // inferred from electronic annotation /// 0001890 // placenta development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009887 // organ morphogenesis // traceable author statement /// 0019800 // peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005589 // collagen type VI // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity","0005518 // collagen binding // inferred from electronic annotation /// 0005539 // glycosaminoglycan binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from electronic annotation /// 0050840 // extracellular matrix binding // inferred from electronic annotation","chr12:91539034-91576806 (-) // 97.79 // q21.33"]
["11739202_a_at",-0.38149214,-0.47734642,-0.47734642,0.8422923,0.4431615,0.38149214,0.0037018578,0.0024870362,-2.0014472,-1.0010436,2.0014472,"down","ATP5G3",518,"0006810 // transport // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0015986 // ATP synthesis coupled proton transport // inferred from electronic annotation /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005753 // mitochondrial proton-transporting ATP synthase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation /// 0033177 // proton-transporting two-sector ATPase complex, proton-transporting domain // inferred from electronic annotation /// 0045263 // proton-transporting ATP synthase complex, coupling factor F(o) // inferred from electronic annotation","0005215 // transporter activity // non-traceable author statement /// 0008289 // lipid binding // inferred from electronic annotation /// 0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation","chr2:176040986-176046435 (-) // 65.25 // q31.1"]
["11718862_at",-0.34647894,-0.37058735,-0.29323292,0.7998395,0.5741668,0.29323292,0.005185627,0.0038399864,-1.8564067,-0.8925128,1.8564067,"down","SEC63",11231,"0006457 // protein folding // inferred from electronic annotation /// 0006612 // protein targeting to membrane // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // traceable author statement /// 0031072 // heat shock protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr6:108188961-108279504 (-) // 87.17 // q21"]
["11751128_x_at",-0.19930077,-0.22959518,-0.21178246,0.22332191,0.19930077,0.34617043,0.0015242294,0.00053221104,-1.3849404,-0.46982384,1.3849404,"down","SHISA5",51246,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from mutant phenotype /// 0050699 // WW domain binding // inferred from physical interaction","chr3:48509713-48520968 (-) // 91.12 // p21.31"]
["11725931_at",-0.19496822,-0.20673752,-0.16873789,0.43581486,0.16873741,0.18533611,0.007907775,0.006494456,-1.3693051,-0.453444,1.3693051,"down","HSPA5",3309,"0002576 // platelet degranulation // traceable author statement /// 0006200 // ATP catabolic process // inferred from sequence or structural similarity /// 0006916 // anti-apoptosis // inferred from mutant phenotype /// 0006916 // anti-apoptosis // traceable author statement /// 0006983 // ER overload response // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0021589 // cerebellum structural organization // inferred from electronic annotation /// 0021680 // cerebellar Purkinje cell layer development // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030433 // ER-associated protein catabolic process // traceable author statement /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0031398 // positive regulation of protein ubiquitination // inferred from electronic annotation /// 0042149 // cellular response to glucose starvation // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from electronic annotation /// 0060904 // regulation of protein folding in endoplasmic reticulum // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0008180 // signalosome // inferred from direct assay /// 0008303 // caspase complex // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // inferred from direct assay /// 0030496 // midbody // inferred from direct assay /// 0034663 // endoplasmic reticulum chaperone complex // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from sequence or structural similarity /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0030674 // protein binding, bridging // non-traceable author statement /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0043022 // ribosome binding // inferred from electronic annotation /// 0043027 // cysteine-type endopeptidase inhibitor activity involved in apoptotic process // inferred from direct assay /// 0051082 // unfolded protein binding // traceable author statement /// 0051082 // unfolded protein binding // inferred from electronic annotation /// 0051087 // chaperone binding // traceable author statement /// 0051787 // misfolded protein binding // inferred from direct assay /// 0051787 // misfolded protein binding // inferred from electronic annotation","chr9:127997128-128003771 (-) // 89.6 // q33.3"]
["11755296_a_at",-0.23684597,-0.26255226,-0.3152361,0.23684597,0.25310135,0.31335163,0.0008051186,7.98081e-5,-1.4532784,-0.5393111,1.4532784,"down","PSAP",5660,"0002576 // platelet degranulation // traceable author statement /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006687 // glycosphingolipid metabolic process // traceable author statement /// 0006869 // lipid transport // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0019216 // regulation of lipid metabolic process // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0043085 // positive regulation of catalytic activity // traceable author statement /// 0043408 // regulation of MAPK cascade // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0048589 // developmental growth // inferred from electronic annotation /// 0060736 // prostate gland growth // inferred from electronic annotation /// 0060742 // epithelial cell differentiation involved in prostate gland development // inferred from electronic annotation /// 0071310 // cellular response to organic substance // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from sequence or structural similarity /// 0005615 // extracellular space // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016021 // integral to membrane // traceable author statement /// 0043202 // lysosomal lumen // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0008047 // enzyme activator activity // traceable author statement /// 0008289 // lipid binding // traceable author statement","chr10:73576939-73594263 (-) // 96.12 // q22.1"]
["11725257_at",-0.32636452,-0.2777195,-0.23620415,0.2667942,0.31550407,0.23620415,0.00084399927,9.184798e-5,-1.4670624,-0.55293024,1.4670624,"down","FZD10",11211,"0001944 // vasculature development // not recorded /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007420 // brain development // not recorded /// 0008406 // gonad development // not recorded /// 0009790 // embryo development // not recorded /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from sequence or structural similarity /// 0032855 // positive regulation of Rac GTPase activity // inferred from mutant phenotype /// 0032956 // regulation of actin cytoskeleton organization // inferred from mutant phenotype /// 0034259 // negative regulation of Rho GTPase activity // inferred from mutant phenotype /// 0038031 // non-canonical Wnt receptor signaling pathway via JNK cascade // inferred from mutant phenotype /// 0043507 // positive regulation of JUN kinase activity // inferred from mutant phenotype /// 0060070 // canonical Wnt receptor signaling pathway // not recorded /// 0071300 // cellular response to retinoic acid // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // not recorded /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042995 // cell projection // not recorded","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017147 // Wnt-protein binding // not recorded /// 0017147 // Wnt-protein binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // not recorded /// 0042813 // Wnt-activated receptor activity // not recorded /// 0042813 // Wnt-activated receptor activity // traceable author statement","chr12:130647003-130650279 (+) // 96.07 // q24.33"]
["11754916_x_at",-0.37698936,-0.32775164,-0.18504429,0.18957567,0.18504429,0.22734737,0.0021154154,0.001092327,-1.4115213,-0.49725085,1.4115213,"down","CCDC115",84317,"","0005764 // lysosome // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation","","chr2:131095819-131097609 (-) // 35.68 // q21.1"]
["11756585_a_at",-0.23317337,-0.22159195,-0.20282173,0.2529688,0.2722273,0.20282173,0.0006380416,3.3248507e-5,-1.3773243,-0.4618683,1.3773243,"down","AQP3",360,"0002684 // positive regulation of immune system process // inferred from direct assay /// 0006810 // transport // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0006833 // water transport // inferred from electronic annotation /// 0007588 // excretion // traceable author statement /// 0015793 // glycerol transport // inferred from electronic annotation /// 0015840 // urea transport // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from direct assay /// 0033280 // response to vitamin D // traceable author statement /// 0042476 // odontogenesis // inferred from expression pattern /// 0045616 // regulation of keratinocyte differentiation // traceable author statement /// 0051592 // response to calcium ion // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070295 // renal water absorption // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred by curator /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation","0005215 // transporter activity // non-traceable author statement /// 0005215 // transporter activity // inferred from electronic annotation /// 0015250 // water channel activity // not recorded /// 0015250 // water channel activity // traceable author statement /// 0015250 // water channel activity // inferred from electronic annotation /// 0015254 // glycerol channel activity // inferred from direct assay","chr9:33441187-33443142 (-) // 93.33 // p13.3"]
["11741883_a_at",-0.13826656,-0.124197006,-0.13493347,0.3377447,0.28766632,0.124197006,0.005440024,0.004085875,-1.3034497,-0.382335,1.3034497,"down","MRPL39",54148,"","0005739 // mitochondrion // inferred from electronic annotation /// 0005761 // mitochondrial ribosome // non-traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation","chr21:26957969-26979801 (-) // 96.08 // q21.3"]
["11757591_s_at",-0.2184887,-0.30458164,-0.15134716,0.2106638,0.1779871,0.15134716,0.0020531714,0.0010442702,-1.3239101,-0.40480518,1.3239101,"down","PAN3",255967,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from electronic annotation /// 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement","0003676 // nucleic acid binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr13:28868943-28869472 (+) // 93.79 // q12.2"]
["11758556_s_at",-0.25887012,-0.51886654,-0.3805828,0.3395319,0.25887012,0.30917263,0.0019427151,0.0009402669,-1.6117538,-0.6886314,1.6117538,"down","PGM2",55276,"0005975 // carbohydrate metabolic process // traceable author statement /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005978 // glycogen biosynthetic process // traceable author statement /// 0005980 // glycogen catabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0016052 // carbohydrate catabolic process // not recorded /// 0044281 // small molecule metabolic process // traceable author statement /// 0046386 // deoxyribose phosphate catabolic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // not recorded /// 0005829 // cytosol // traceable author statement","0000287 // magnesium ion binding // inferred from electronic annotation /// 0004614 // phosphoglucomutase activity // not recorded /// 0004614 // phosphoglucomutase activity // inferred from electronic annotation /// 0008973 // phosphopentomutase activity // inferred from direct assay /// 0008973 // phosphopentomutase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0016868 // intramolecular transferase activity, phosphotransferases // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:37864142-37864560 (+) // 98.12 // p14"]
["11737813_s_at",-0.19734955,-0.15082645,-0.12225628,0.12225628,0.4422617,0.13639832,0.022877716,0.02156732,-1.3108017,-0.39044952,1.3108017,"down","NNT",23530,"0006099 // tricarboxylic acid cycle // traceable author statement /// 0015992 // proton transport // traceable author statement /// 0015992 // proton transport // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005746 // mitochondrial respiratory chain // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003957 // NAD(P)+ transhydrogenase (B-specific) activity // traceable author statement /// 0008746 // NAD(P)+ transhydrogenase activity // not recorded /// 0008750 // NAD(P)+ transhydrogenase (AB-specific) activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0050661 // NADP binding // inferred from direct assay /// 0050661 // NADP binding // inferred from electronic annotation /// 0051287 // NAD binding // traceable author statement","chr5:43603228-43705667 (+) // 99.57 // p12"]
["11758514_s_at",-0.24258614,-0.29806614,-0.30583954,0.44356918,0.32340145,0.24258614,0.0015573928,0.0005558094,-1.5354728,-0.61868286,1.5354728,"down","SERBP1",26135,"0043488 // regulation of mRNA stability // non-traceable author statement /// 0045767 // regulation of anti-apoptosis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr1:67873949-67874395 (-) // 98.89 // p31.3"]
["11764239_s_at",-0.28937626,-0.25335026,-0.15662289,0.16737843,0.15662289,0.17161846,0.0015598015,0.00056494103,-1.317975,-0.39832306,1.317975,"down","TBRG1",84897,"0006260 // DNA replication // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0032066 // nucleolus to nucleoplasm transport // inferred from direct assay /// 0050821 // protein stabilization // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr11:124493744-124494259 (+) // 99.03 // q24.2"]
["11758797_s_at",-0.31702423,-0.2472949,-0.17263222,0.17263222,0.22620296,0.1745882,0.0016357829,0.0006431825,-1.3535907,-0.4367916,1.3535907,"down","SRSF10",10772,"0000244 // assembly of spliceosomal tri-snRNP // non-traceable author statement /// 0000375 // RNA splicing, via transesterification reactions // inferred from direct assay /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006376 // mRNA splice site selection // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // non-traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0016482 // cytoplasmic transport // inferred from direct assay /// 0048025 // negative regulation of nuclear mRNA splicing, via spliceosome // inferred from direct assay","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0050733 // RS domain binding // non-traceable author statement /// 0051082 // unfolded protein binding // non-traceable author statement","chr1:24290836-24306885 (-) // 85.86 // p36.11 /// chr1_gl000191_random:34172-50213 (-) // 85.84 //"]
["11757182_a_at",-0.65553284,-0.42538738,-0.4752655,0.42538738,0.5646591,0.4830017,0.0011437805,0.00023514063,-2.0135546,-1.0097446,2.0135546,"down","UHMK1",127933,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0018105 // peptidyl-serine phosphorylation // inferred from sequence or structural similarity /// 0018105 // peptidyl-serine phosphorylation // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0031175 // neuron projection development // inferred from electronic annotation /// 0045948 // positive regulation of translational initiation // inferred from sequence or structural similarity /// 0045948 // positive regulation of translational initiation // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046825 // regulation of protein export from nucleus // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030424 // axon // inferred from sequence or structural similarity /// 0030424 // axon // inferred from electronic annotation /// 0032839 // dendrite cytoplasm // inferred from sequence or structural similarity /// 0032839 // dendrite cytoplasm // inferred from electronic annotation /// 0071598 // neuronal ribonucleoprotein granule // inferred from sequence or structural similarity /// 0071598 // neuronal ribonucleoprotein granule // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred by curator /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred by curator /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0043021 // ribonucleoprotein complex binding // inferred from sequence or structural similarity /// 0043021 // ribonucleoprotein complex binding // inferred from electronic annotation","chr1:162467874-162494598 (+) // 99.15 // q23.3"]
["11744841_a_at",-0.16100311,-0.21763706,-0.23672152,0.28024864,0.16100311,0.16171741,0.0018943711,0.000885182,-1.3251083,-0.4061103,1.3251083,"down","TIPRL",261726,"0000077 // DNA damage checkpoint // inferred from mutant phenotype /// 0034048 // negative regulation of protein phosphatase type 2A activity // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:168148188-168171347 (+) // 96.47 // q24.2"]
["11740171_s_at",-0.1631751,-0.24952888,-0.22288847,0.46257114,0.32534027,0.16317463,0.0055692703,0.0042261216,-1.4428215,-0.5288928,1.4428215,"down","PBRM1",55193,"0001890 // placenta development // inferred from electronic annotation /// 0006338 // chromatin remodeling // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007067 // mitosis // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0016568 // chromatin modification // inferred from electronic annotation","0000228 // nuclear chromosome // non-traceable author statement /// 0000776 // kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // non-traceable author statement /// 0003682 // chromatin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr3:52579367-52718931 (-) // 96.62 // p21.1"]
["11750236_a_at",-0.18967247,-0.19927216,-0.14773893,0.27017927,0.14773893,0.4202304,0.0060143746,0.0046752566,-1.3739004,-0.45827737,1.3739004,"down","AGBL1",123624,"0006508 // proteolysis // inferred from electronic annotation /// 0035609 // C-terminal protein deglutamylation // inferred from sequence or structural similarity /// 0035610 // protein side chain deglutamylation // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0004180 // carboxypeptidase activity // inferred from electronic annotation /// 0004181 // metallocarboxypeptidase activity // inferred from sequence or structural similarity /// 0004181 // metallocarboxypeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0015631 // tubulin binding // inferred from sequence or structural similarity /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:86805855-86839446 (+) // 89.4 // q25.3"]
["11718642_s_at",-0.3347578,-0.59473324,-0.42071247,0.43298054,0.47021008,0.3347578,0.00156382,0.00056744955,-1.8184602,-0.86271733,1.8184602,"down","OSBPL8",114882,"0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation","","0005543 // phospholipid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation","chr12:76745576-76953589 (-) // 99.71 // q21.2"]
["11720599_s_at",-0.44831467,-0.46085262,-0.516613,0.5580387,0.54782104,0.44831467,0.00055139343,1.690206e-5,-1.9907584,-0.9933182,1.9907584,"down","SUB1",10923,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr5:32586219-32604172 (+) // 87.52 // p13.3"]
["11757679_s_at",-0.23296547,-0.2471695,-0.14398861,0.14398861,0.20411587,0.20075512,0.0014749195,0.00048909907,-1.3112969,-0.39099437,1.3112969,"down","SMAD5",4090,"0001503 // ossification // inferred from electronic annotation /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0001880 // Mullerian duct regression // inferred from electronic annotation /// 0002051 // osteoblast fate commitment // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // non-traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0007281 // germ cell development // inferred from electronic annotation /// 0009880 // embryonic pattern specification // inferred from sequence or structural similarity /// 0030218 // erythrocyte differentiation // inferred from electronic annotation /// 0030509 // BMP signaling pathway // inferred from sequence or structural similarity /// 0030509 // BMP signaling pathway // traceable author statement /// 0030509 // BMP signaling pathway // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0060048 // cardiac muscle contraction // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation","0005622 // intracellular // non-traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016021 // integral to membrane // non-traceable author statement","0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005057 // receptor signaling protein activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0030618 // transforming growth factor beta receptor, pathway-specific cytoplasmic mediator activity // traceable author statement /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr5:135517992-135518421 (+) // 86.14 // q31.1"]
["11759740_x_at",-0.22097397,-0.336411,-0.24950027,0.35328484,0.22097349,0.260633,0.001459056,0.0004736629,-1.4613066,-0.54725885,1.4613066,"down","CDC23",8697,"0000075 // cell cycle checkpoint // traceable author statement /// 0000080 // G1 phase of mitotic cell cycle // inferred from direct assay /// 0000278 // mitotic cell cycle // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0007049 // cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from direct assay /// 0007067 // mitosis // inferred from electronic annotation /// 0007067 // mitosis // traceable author statement /// 0007080 // mitotic metaphase plate congression // inferred from direct assay /// 0007091 // mitotic metaphase/anaphase transition // traceable author statement /// 0007094 // mitotic cell cycle spindle assembly checkpoint // traceable author statement /// 0007096 // regulation of exit from mitosis // traceable author statement /// 0016567 // protein ubiquitination // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030071 // regulation of mitotic metaphase/anaphase transition // inferred from direct assay /// 0030071 // regulation of mitotic metaphase/anaphase transition // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay","0005622 // intracellular // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005680 // anaphase-promoting complex // inferred from direct assay /// 0005680 // anaphase-promoting complex // inferred from electronic annotation /// 0005680 // anaphase-promoting complex // traceable author statement /// 0005829 // cytosol // traceable author statement","0004842 // ubiquitin-protein ligase activity // traceable author statement","chr5:137541560-137549033 (-) // 84.99 // q31.2"]
["11719738_at",-0.5255456,-0.377522,-0.4885006,0.5237398,0.570343,0.3775215,0.001091852,0.00019925716,-1.9377613,-0.9543909,1.9377613,"down","DCP2",167227,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from mutant phenotype /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from electronic annotation /// 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement /// 0071044 // histone mRNA catabolic process // inferred from mutant phenotype","0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016442 // RNA-induced silencing complex // inferred from direct assay","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016896 // exoribonuclease activity, producing 5'-phosphomonoesters // traceable author statement /// 0030145 // manganese ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:112312398-112356761 (+) // 96.56 // q22.2"]
["11716083_a_at",-0.29816246,-0.32489777,-0.36777592,0.38198185,0.30978203,0.29816246,0.0006672249,3.7466234e-5,-1.580361,-0.6602542,1.580361,"down","AHSA1",10598,"0006457 // protein folding // inferred from sequence or structural similarity /// 0006950 // response to stress // inferred from sequence or structural similarity /// 0006950 // response to stress // inferred from electronic annotation /// 0032781 // positive regulation of ATPase activity // inferred from direct assay /// 0032781 // positive regulation of ATPase activity // inferred from sequence or structural similarity /// 0032781 // positive regulation of ATPase activity // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0001671 // ATPase activator activity // inferred from direct assay /// 0001671 // ATPase activator activity // inferred from sequence or structural similarity /// 0001671 // ATPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0051087 // chaperone binding // inferred from direct assay /// 0051087 // chaperone binding // inferred from electronic annotation","chr14:77924373-77935815 (+) // 97.35 // q24.3"]
["11719894_s_at",-0.5803313,-0.32490492,-0.20475674,0.22337437,0.31051445,0.20475674,0.007327584,0.0059327553,-1.5328461,-0.61621284,1.5328461,"down","FAM91A2","157769 /// 57234 /// 728855","","","","chr8:124780678-124827688 (+) // 98.14 // q24.13"]
["11719897_x_at",-0.556901,-0.53566694,-0.20171356,0.20171356,0.31520367,0.26195765,0.0058008186,0.0044559543,-1.6144605,-0.6910521,1.6144605,"down","FAM91A1",157769,"","","","chr8:124780678-124827688 (+) // 98.14 // q24.13"]
["11719894_s_at",-0.5803313,-0.32490492,-0.20475674,0.22337437,0.31051445,0.20475674,0.007327584,0.0059327553,-1.5328461,-0.61621284,1.5328461,"down","LOC728855","157769 /// 57234 /// 728855","","","","chr8:124780678-124827688 (+) // 98.14 // q24.13"]
["11755895_a_at",-0.28997612,-0.4233842,-0.2588644,0.28911686,0.3163805,0.2588644,0.0012764687,0.00032378986,-1.5285836,-0.6121955,1.5285836,"down","FAM129A",116496,"0001933 // negative regulation of protein phosphorylation // inferred from sequence or structural similarity /// 0001933 // negative regulation of protein phosphorylation // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from sequence or structural similarity /// 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0034976 // response to endoplasmic reticulum stress // inferred from sequence or structural similarity /// 0034976 // response to endoplasmic reticulum stress // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from sequence or structural similarity /// 0045727 // positive regulation of translation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","","chr1:184763251-184837177 (-) // 97.46 // q25.3"]
["11722072_at",-0.3419671,-0.5128932,-0.5578103,0.5673752,0.34196758,0.41385365,0.001616806,0.0006190097,-1.8815944,-0.91195565,1.8815944,"down","MESDC1",59274,"","","","chr15:81293294-81296708 (+) // 94.0 // q25.1"]
["11719093_at",-0.14472628,-0.33875751,-0.3207469,0.14472675,0.22674656,0.21467447,0.0034969319,0.002287614,-1.3788443,-0.4634595,1.3788443,"down","CYB5B",80777,"0006810 // transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008047 // enzyme activator activity // inferred from electronic annotation /// 0020037 // heme binding // inferred from direct assay /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:69458427-69500167 (+) // 96.02 // q22.1"]
["11731478_x_at",-0.34037685,-0.24574852,-0.3275156,0.31284618,0.24574804,0.2526493,0.00085385906,9.487323e-5,-1.4896377,-0.5749615,1.4896377,"down","CHMP1B",57132,"0006810 // transport // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction","chr18:11850937-11854448 (+) // 91.22 // p11.21"]
["11716378_a_at",-0.22297192,-0.39756966,-0.47093773,0.22297192,0.2929926,0.3479519,0.002422976,0.0013537788,-1.5711256,-0.65179855,1.5711256,"down","TOMM20",9804,"0006605 // protein targeting // inferred from electronic annotation /// 0006626 // protein targeting to mitochondrion // inferred from direct assay /// 0006626 // protein targeting to mitochondrion // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005740 // mitochondrial envelope // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005742 // mitochondrial outer membrane translocase complex // non-traceable author statement /// 0005742 // mitochondrial outer membrane translocase complex // traceable author statement /// 0005742 // mitochondrial outer membrane translocase complex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0015450 // P-P-bond-hydrolysis-driven protein transmembrane transporter activity // inferred from direct assay /// 0051082 // unfolded protein binding // inferred from direct assay /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr1:235272383-235292313 (-) // 79.42 // q42.3"]
["11722200_s_at",-0.17823315,-0.2266779,-0.2060504,0.4439006,0.3734827,0.17823315,0.0039314847,0.0026751703,-1.4494704,-0.5355259,1.4494704,"down","ADAM12",8038,"0006508 // proteolysis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007520 // myoblast fusion // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // traceable author statement /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:127701871-128077219 (-) // 99.28 // q26.2"]
["11721009_at",-0.17286777,-0.14808464,-0.17319107,0.2796631,0.4488926,0.14808464,0.007830824,0.006407651,-1.3726159,-0.45692796,1.3726159,"down","MED1",5469,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000902 // cell morphogenesis // inferred from mutant phenotype /// 0000902 // cell morphogenesis // inferred from sequence or structural similarity /// 0001525 // angiogenesis // inferred from sequence or structural similarity /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0001892 // embryonic placenta development // inferred from electronic annotation /// 0002088 // lens development in camera-type eye // inferred from sequence or structural similarity /// 0002088 // lens development in camera-type eye // inferred from electronic annotation /// 0002154 // thyroid hormone mediated signaling pathway // inferred from mutant phenotype /// 0002154 // thyroid hormone mediated signaling pathway // inferred from sequence or structural similarity /// 0003222 // ventricular trabecula myocardium morphogenesis // inferred from electronic annotation /// 0003406 // retinal pigment epithelium development // inferred from electronic annotation /// 0006260 // DNA replication // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006356 // regulation of transcription from RNA polymerase I promoter // inferred from direct assay /// 0006356 // regulation of transcription from RNA polymerase I promoter // inferred from sequence or structural similarity /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006590 // thyroid hormone generation // inferred from electronic annotation /// 0006702 // androgen biosynthetic process // inferred from mutant phenotype /// 0006702 // androgen biosynthetic process // inferred from sequence or structural similarity /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0010628 // positive regulation of gene expression // inferred from sequence or structural similarity /// 0010839 // negative regulation of keratinocyte proliferation // inferred from mutant phenotype /// 0010839 // negative regulation of keratinocyte proliferation // inferred from sequence or structural similarity /// 0030216 // keratinocyte differentiation // inferred from mutant phenotype /// 0030216 // keratinocyte differentiation // inferred from sequence or structural similarity /// 0030224 // monocyte differentiation // inferred from electronic annotation /// 0030518 // intracellular steroid hormone receptor signaling pathway // inferred from direct assay /// 0030518 // intracellular steroid hormone receptor signaling pathway // inferred from sequence or structural similarity /// 0030521 // androgen receptor signaling pathway // inferred from direct assay /// 0030521 // androgen receptor signaling pathway // inferred from sequence or structural similarity /// 0031100 // organ regeneration // inferred from electronic annotation /// 0033148 // positive regulation of intracellular estrogen receptor signaling pathway // inferred from electronic annotation /// 0033160 // positive regulation of protein import into nucleus, translocation // inferred from electronic annotation /// 0033598 // mammary gland epithelial cell proliferation // inferred from electronic annotation /// 0033601 // positive regulation of mammary gland epithelial cell proliferation // inferred from electronic annotation /// 0035050 // embryonic heart tube development // inferred from electronic annotation /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0035162 // embryonic hemopoiesis // inferred from electronic annotation /// 0035357 // peroxisome proliferator activated receptor signaling pathway // inferred from electronic annotation /// 0035729 // cellular response to hepatocyte growth factor stimulus // inferred from electronic annotation /// 0035855 // megakaryocyte development // inferred from sequence or structural similarity /// 0035855 // megakaryocyte development // inferred from electronic annotation /// 0042789 // mRNA transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0042789 // mRNA transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0043010 // camera-type eye development // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from sequence or structural similarity /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045444 // fat cell differentiation // inferred from direct assay /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0045618 // positive regulation of keratinocyte differentiation // inferred from mutant phenotype /// 0045618 // positive regulation of keratinocyte differentiation // inferred from sequence or structural similarity /// 0045665 // negative regulation of neuron differentiation // inferred from sequence or structural similarity /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048821 // erythrocyte development // inferred from sequence or structural similarity /// 0048821 // erythrocyte development // inferred from electronic annotation /// 0048822 // enucleate erythrocyte development // inferred from electronic annotation /// 0051726 // regulation of cell cycle // non-traceable author statement /// 0060335 // positive regulation of interferon-gamma-mediated signaling pathway // inferred from electronic annotation /// 0060744 // mammary gland branching involved in thelarche // inferred from electronic annotation /// 0060745 // mammary gland branching involved in pregnancy // inferred from electronic annotation /// 0060750 // epithelial cell proliferation involved in mammary gland duct elongation // inferred from electronic annotation /// 0070318 // positive regulation of G0 to G1 transition // inferred from electronic annotation /// 0070371 // ERK1 and ERK2 cascade // inferred from direct assay /// 0070562 // regulation of vitamin D receptor signaling pathway // inferred from electronic annotation /// 0071364 // cellular response to epidermal growth factor stimulus // inferred from direct assay /// 0071364 // cellular response to epidermal growth factor stimulus // inferred from sequence or structural similarity /// 0071383 // cellular response to steroid hormone stimulus // inferred from direct assay /// 0097067 // cellular response to thyroid hormone stimulus // inferred from direct assay /// 2000273 // positive regulation of receptor activity // inferred from mutant phenotype /// 2000347 // positive regulation of hepatocyte proliferation // inferred from electronic annotation /// 2001141 // regulation of RNA biosynthetic process // inferred from mutant phenotype /// 2001141 // regulation of RNA biosynthetic process // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from sequence or structural similarity /// 0016592 // mediator complex // inferred from direct assay /// 0016592 // mediator complex // inferred from mutant phenotype /// 0016592 // mediator complex // inferred from electronic annotation /// 0016592 // mediator complex // inferred from sequence or structural similarity","0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from sequence or structural similarity /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0001047 // core promoter binding // inferred from direct assay /// 0001047 // core promoter binding // inferred from sequence or structural similarity /// 0001104 // RNA polymerase II transcription cofactor activity // inferred from direct assay /// 0001104 // RNA polymerase II transcription cofactor activity // inferred from electronic annotation /// 0001104 // RNA polymerase II transcription cofactor activity // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from mutant phenotype /// 0003682 // chromatin binding // inferred from sequence or structural similarity /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003712 // transcription cofactor activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0003713 // transcription coactivator activity // inferred from sequence or structural similarity /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // traceable author statement /// 0004872 // receptor activity // inferred from direct assay /// 0004872 // receptor activity // inferred from sequence or structural similarity /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0016922 // ligand-dependent nuclear receptor binding // inferred from direct assay /// 0016922 // ligand-dependent nuclear receptor binding // inferred from physical interaction /// 0030331 // estrogen receptor binding // inferred from physical interaction /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from mutant phenotype /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // non-traceable author statement /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from sequence or structural similarity /// 0030375 // thyroid hormone receptor coactivator activity // inferred from mutant phenotype /// 0032403 // protein complex binding // inferred from electronic annotation /// 0035257 // nuclear hormone receptor binding // inferred from electronic annotation /// 0036033 // mediator complex binding // inferred from direct assay /// 0042809 // vitamin D receptor binding // inferred from physical interaction /// 0042809 // vitamin D receptor binding // non-traceable author statement /// 0042809 // vitamin D receptor binding // traceable author statement /// 0042974 // retinoic acid receptor binding // inferred from physical interaction /// 0042975 // peroxisome proliferator activated receptor binding // inferred from physical interaction /// 0046966 // thyroid hormone receptor binding // inferred from direct assay /// 0046966 // thyroid hormone receptor binding // inferred from physical interaction /// 0046966 // thyroid hormone receptor binding // inferred from sequence or structural similarity /// 0050693 // LBD domain binding // inferred from physical interaction","chr17:37560539-37607539 (-) // 98.5 // q12"]
["11723149_a_at",-0.27816486,-0.34587574,-0.22772503,0.42613316,0.42027283,0.22772503,0.0019491622,0.00095275586,-1.5604537,-0.6419655,1.5604537,"down","SLC19A2",10560,"0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015884 // folic acid transport // non-traceable author statement /// 0015888 // thiamine transport // non-traceable author statement /// 0015888 // thiamine transport // inferred from electronic annotation /// 0042723 // thiamine-containing compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0071934 // thiamine transmembrane transport // traceable author statement /// 0071934 // thiamine transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005542 // folic acid binding // inferred from electronic annotation /// 0008517 // folic acid transporter activity // non-traceable author statement /// 0008518 // reduced folate carrier activity // inferred from electronic annotation /// 0015234 // thiamine transmembrane transporter activity // traceable author statement /// 0015234 // thiamine transmembrane transporter activity // inferred from electronic annotation /// 0015403 // thiamine uptake transmembrane transporter activity // inferred from sequence or structural similarity /// 0015403 // thiamine uptake transmembrane transporter activity // inferred from electronic annotation","chr1:169432464-169455241 (-) // 96.39 // q24.2"]
["11716369_x_at",-0.25896072,-0.3063612,-0.26565838,0.3750038,0.41058922,0.25896168,0.001091852,0.00020244582,-1.5424014,-0.62517834,1.5424014,"down","SUMO2",6613,"0016925 // protein sumoylation // inferred from direct assay /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr17:73163154-73179098 (-) // 84.88 // q25.1"]
["11744118_a_at",-0.41857052,-0.37957,-0.4131508,0.43449783,0.41476917,0.37957,0.00031084043,2.2598608e-6,-1.757319,-0.81337607,1.757319,"down","MRPL10",124995,"0006412 // translation // inferred from sequence or structural similarity /// 0042254 // ribosome biogenesis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005762 // mitochondrial large ribosomal subunit // inferred from sequence or structural similarity /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from sequence or structural similarity /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from sequence or structural similarity","chr17:45900490-45908896 (-) // 80.43 // q21.32"]
["11721696_a_at",-0.28177643,-0.17584991,-0.1852951,0.22581196,0.28391933,0.17584991,0.0016431456,0.00065374386,-1.359272,-0.4428342,1.359272,"down","MRPL18",29074,"0006412 // translation // non-traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0035928 // rRNA import into mitochondrion // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005761 // mitochondrial ribosome // non-traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0008097 // 5S rRNA binding // inferred from direct assay","chr6:160210828-160220018 (+) // 95.87 // q25.3"]
["11743764_a_at",-0.4749179,-0.58540916,-0.7079983,0.6166234,0.47491837,0.5183954,0.0009735221,0.00014277491,-2.18266,-1.1260874,2.18266,"down","RRBP1",6238,"0006412 // translation // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0015031 // protein transport // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // non-traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005840 // ribosome // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // non-traceable author statement /// 0030176 // integral to endoplasmic reticulum membrane // inferred from electronic annotation","0004872 // receptor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation","chr20:17594324-17662928 (-) // 97.01 // p12.1"]
["11739813_a_at",-0.2631035,-0.24041033,-0.51667976,0.24040985,0.30229712,0.2767439,0.0036817046,0.002460812,-1.529664,-0.61321485,1.529664,"down","FZD1",8321,"0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0001944 // vasculature development // not recorded /// 0003151 // outflow tract morphogenesis // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007199 // G-protein coupled receptor signaling pathway coupled to cGMP nucleotide second messenger // not recorded /// 0007223 // Wnt receptor signaling pathway, calcium modulating pathway // not recorded /// 0007267 // cell-cell signaling // inferred from direct assay /// 0007267 // cell-cell signaling // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007409 // axonogenesis // not recorded /// 0007420 // brain development // not recorded /// 0008406 // gonad development // not recorded /// 0009790 // embryo development // not recorded /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from sequence or structural similarity /// 0030514 // negative regulation of BMP signaling pathway // not recorded /// 0030514 // negative regulation of BMP signaling pathway // inferred from electronic annotation /// 0030855 // epithelial cell differentiation // not recorded /// 0030855 // epithelial cell differentiation // inferred from electronic annotation /// 0035414 // negative regulation of catenin import into nucleus // inferred from electronic annotation /// 0035425 // autocrine signaling // inferred from direct assay /// 0042493 // response to drug // inferred from mutant phenotype /// 0044338 // canonical Wnt receptor signaling pathway involved in mesenchymal stem cell differentiation // inferred from mutant phenotype /// 0044339 // canonical Wnt receptor signaling pathway involved in osteoblast differentiation // inferred from mutant phenotype /// 0045667 // regulation of osteoblast differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0048286 // lung alveolus development // not recorded /// 0048286 // lung alveolus development // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0060022 // hard palate development // inferred from electronic annotation /// 0060070 // canonical Wnt receptor signaling pathway // inferred from direct assay /// 0060070 // canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0060412 // ventricular septum morphogenesis // inferred from electronic annotation /// 0071305 // cellular response to vitamin D // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0071375 // cellular response to peptide hormone stimulus // inferred from electronic annotation /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // not recorded /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation","0005737 // cytoplasm // not recorded /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0032589 // neuron projection membrane // not recorded /// 0045177 // apical part of cell // not recorded","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0017147 // Wnt-protein binding // inferred from physical interaction /// 0017147 // Wnt-protein binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0042813 // Wnt-activated receptor activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr7:90893754-90898519 (+) // 97.55 // q21.13"]
["11721426_at",-0.28127146,-0.2549839,-0.37304926,0.36033154,0.27431393,0.2549839,0.0011555209,0.00024123449,-1.5153433,-0.59964466,1.5153433,"down","FZD5",7855,"0000578 // embryonic axis specification // inferred from direct assay /// 0001525 // angiogenesis // not recorded /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001944 // vasculature development // inferred from electronic annotation /// 0006915 // apoptotic process // not recorded /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007409 // axonogenesis // not recorded /// 0007420 // brain development // not recorded /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008406 // gonad development // not recorded /// 0008595 // anterior/posterior axis specification, embryo // inferred from direct assay /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from sequence or structural similarity /// 0031076 // embryonic camera-type eye development // not recorded /// 0031076 // embryonic camera-type eye development // inferred from electronic annotation /// 0031077 // post-embryonic camera-type eye development // not recorded /// 0031077 // post-embryonic camera-type eye development // inferred from electronic annotation /// 0032729 // positive regulation of interferon-gamma production // inferred from mutant phenotype /// 0033077 // T cell differentiation in thymus // not recorded /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0043507 // positive regulation of JUN kinase activity // inferred from electronic annotation /// 0044332 // Wnt receptor signaling pathway involved in dorsal/ventral axis specification // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction /// 0048469 // cell maturation // inferred from electronic annotation /// 0060061 // Spemann organizer formation // inferred from direct assay /// 0060070 // canonical Wnt receptor signaling pathway // inferred from direct assay /// 0060070 // canonical Wnt receptor signaling pathway // inferred from mutant phenotype /// 0060070 // canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0060561 // apoptotic process involved in morphogenesis // inferred from electronic annotation /// 0060716 // labyrinthine layer blood vessel development // not recorded /// 0060716 // labyrinthine layer blood vessel development // inferred from electronic annotation /// 0071219 // cellular response to molecule of bacterial origin // inferred from direct assay","0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // not recorded /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042995 // cell projection // not recorded","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017147 // Wnt-protein binding // inferred from physical interaction /// 0017147 // Wnt-protein binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0030165 // PDZ domain binding // not recorded /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042813 // Wnt-activated receptor activity // not recorded /// 0042813 // Wnt-activated receptor activity // inferred by curator","chr2:208627309-208634287 (-) // 97.55 // q33.3"]
["11719160_at",-0.15337944,-0.25434875,-0.24301147,0.15369987,0.15337944,0.1866417,0.0013107243,0.00035066067,-1.3026837,-0.3814869,1.3026837,"down","RAPH1",65059,"0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation","chr2:204298404-204400133 (-) // 94.15 // q33.2"]
["11745724_at",-0.19557571,-0.20561981,-0.14376259,0.26049995,0.25713253,0.14376259,0.0017193909,0.0007206236,-1.3214462,-0.40211773,1.3214462,"down","LOC100507645","100507645 /// 378938","","","","chr11:65265232-65273937 (+) // 94.71 // q13.1"]
["11720253_s_at",-0.43966484,-0.4306326,-0.29386425,0.39739513,0.6273184,0.29386425,0.0027434009,0.001628082,-1.7747058,-0.82757986,1.7747058,"down","TOB1",10140,"0008285 // negative regulation of cell proliferation // traceable author statement","","0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr17:48939583-48941412 (-) // 92.55 // q21.33"]
["11745724_at",-0.19557571,-0.20561981,-0.14376259,0.26049995,0.25713253,0.14376259,0.0017193909,0.0007206236,-1.3214462,-0.40211773,1.3214462,"down","MALAT1","100507645 /// 378938","","","","chr11:65265232-65273937 (+) // 94.71 // q13.1"]
["11719490_a_at",-0.31792164,-0.3474579,-0.5207405,0.3556652,0.31792164,0.37704754,0.0013035384,0.00034132274,-1.6766539,-0.74558485,1.6766539,"down","TMEM189-UBE2V1","387521 /// 387522","","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr20:48549554-48770271 (-) // 76.75 // q13.13"]
["11757141_s_at",-0.1699009,-0.22678757,-0.17999649,0.1699009,0.29947758,0.19419289,0.0016760693,0.0006815215,-1.3318381,-0.41341877,1.3318381,"down","SNORD5","100302240 /// 654320 /// 677792 /// 677805 /// 677822 /// 684959 /// 692063 /// 692072 /// 79101","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr11:93463682-93463812 (-) // 97.01 // q21"]
["11717932_at",-0.13668633,-0.21306229,-0.21720505,0.36844254,0.19833755,0.13668633,0.005976595,0.004633019,-1.3411525,-0.42347336,1.3411525,"down","TBK1",29110,"0002218 // activation of innate immune response // inferred from electronic annotation /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0009615 // response to virus // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0032606 // type I interferon production // traceable author statement /// 0032727 // positive regulation of interferon-alpha production // inferred from direct assay /// 0032728 // positive regulation of interferon-beta production // inferred from direct assay /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0045359 // positive regulation of interferon-beta biosynthetic process // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004672 // protein kinase activity // non-traceable author statement /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0051219 // phosphoprotein binding // inferred from physical interaction","chr12:64845659-64895894 (+) // 98.91 // q14.2"]
["11757141_s_at",-0.1699009,-0.22678757,-0.17999649,0.1699009,0.29947758,0.19419289,0.0016760693,0.0006815215,-1.3318381,-0.41341877,1.3318381,"down","MIR1304","100302240 /// 654320 /// 677792 /// 677805 /// 677822 /// 684959 /// 692063 /// 692072 /// 79101","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr11:93463682-93463812 (-) // 97.01 // q21"]
["11757503_s_at",-0.26041412,-0.31672764,-0.25519753,0.3255806,0.4728546,0.25519753,0.0017193909,0.0007222325,-1.5461254,-0.62865734,1.5461254,"down","PNN",5411,"0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005882 // intermediate filament // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005911 // cell-cell junction // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030057 // desmosome // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0005198 // structural molecule activity // non-traceable author statement","chr14:39651574-39652143 (+) // 92.21 // q21.1"]
["11736425_x_at",-0.23333931,-0.22303486,-0.18104696,0.18104744,0.1932602,0.35277557,0.0024599503,0.001389737,-1.3706259,-0.45483476,1.3706259,"down","STARD4",134429,"0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0030301 // cholesterol transport // inferred from electronic annotation","","0008289 // lipid binding // inferred from electronic annotation /// 0015485 // cholesterol binding // inferred from electronic annotation /// 0017127 // cholesterol transporter activity // inferred from electronic annotation","chr5:110834021-110848260 (-) // 87.16 // q22.1"]
["11715664_a_at",-0.2438612,-0.19685173,-0.25745106,0.30578327,0.19685173,0.3140602,0.0012172924,0.00027417912,-1.4190772,-0.504953,1.4190772,"down","STARD7",56910,"","0005739 // mitochondrion // inferred from electronic annotation","","chr2:96850596-96874579 (-) // 94.09 // q11.2"]
["11717384_a_at",-0.27711582,-0.30303574,-0.2417469,0.2997856,0.26601505,0.2417469,0.0005959546,2.4382294e-5,-1.4571493,-0.5431487,1.4571493,"down","RNF34",80196,"0006915 // apoptotic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:121837843-121862513 (+) // 87.27 // q24.31"]
["11739250_a_at",-0.50944567,-0.2326107,-0.45187283,0.2513423,0.23261023,0.23837662,0.002764035,0.0016427081,-1.5569825,-0.63875276,1.5569825,"down","NUPL1",9818,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0010827 // regulation of glucose transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005643 // nuclear pore // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","0005487 // nucleocytoplasmic transporter activity // inferred from electronic annotation","chr13:25875665-25910478 (+) // 98.19 // q12.13"]
["11755239_a_at",-0.18892765,-0.23831463,-0.25654125,0.2097454,0.19938469,0.18892765,0.0006593511,3.4926867e-5,-1.3446964,-0.42728043,1.3446964,"down","ELL2",22936,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006368 // transcription elongation from RNA polymerase II promoter // inferred from electronic annotation /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006414 // translational elongation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0008023 // transcription elongation factor complex // inferred from electronic annotation /// 0008023 // transcription elongation factor complex // traceable author statement","0003746 // translation elongation factor activity // inferred from electronic annotation","chr5:95220803-95234353 (-) // 94.18 // q15"]
["11736010_at",-0.1707573,-0.18546009,-0.15045738,0.24963284,0.15045738,0.4494486,0.008378251,0.006945794,-1.3680028,-0.4520712,1.3680028,"down","RSL1D1",26156,"0006412 // translation // inferred from electronic annotation /// 0032880 // regulation of protein localization // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0015934 // large ribosomal subunit // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // inferred from electronic annotation","chr16:11927703-11945442 (-) // 58.38 // p13.13"]
["11736118_a_at",-0.35222006,-0.29411602,-0.291471,0.36068106,0.291471,0.3900571,0.0006943628,4.8243663e-5,-1.5800886,-0.66000545,1.5800886,"down","ZFAND5",7763,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0001944 // vasculature development // inferred from electronic annotation /// 0003016 // respiratory system process // inferred from electronic annotation /// 0010761 // fibroblast migration // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0048745 // smooth muscle tissue development // inferred from electronic annotation /// 0060324 // face development // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:74966340-74980386 (-) // 86.52 // q21.13"]
["11754931_a_at",-0.17396736,-0.25833893,-0.20592308,0.17396736,0.31614685,0.19428253,0.001961328,0.0009667417,-1.3574277,-0.44087535,1.3574277,"down","GCLC",2729,"0000096 // sulfur amino acid metabolic process // traceable author statement /// 0006534 // cysteine metabolic process // inferred from direct assay /// 0006536 // glutamate metabolic process // inferred from direct assay /// 0006749 // glutathione metabolic process // inferred from electronic annotation /// 0006750 // glutathione biosynthetic process // inferred from direct assay /// 0006750 // glutathione biosynthetic process // inferred from electronic annotation /// 0006750 // glutathione biosynthetic process // inferred from mutant phenotype /// 0006750 // glutathione biosynthetic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0006916 // anti-apoptosis // inferred from direct assay /// 0006979 // response to oxidative stress // inferred from direct assay /// 0009408 // response to heat // inferred from direct assay /// 0009410 // response to xenobiotic stimulus // inferred from electronic annotation /// 0009725 // response to hormone stimulus // inferred from direct assay /// 0019852 // L-ascorbic acid metabolic process // inferred from electronic annotation /// 0031397 // negative regulation of protein ubiquitination // inferred from electronic annotation /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045454 // cell redox homeostasis // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0046685 // response to arsenic-containing substance // inferred from electronic annotation /// 0050880 // regulation of blood vessel size // inferred from mutant phenotype /// 0051409 // response to nitrosative stress // inferred from electronic annotation /// 0051900 // regulation of mitochondrial depolarization // inferred from electronic annotation","0005737 // cytoplasm // not recorded /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0017109 // glutamate-cysteine ligase complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0004357 // glutamate-cysteine ligase activity // inferred from direct assay /// 0004357 // glutamate-cysteine ligase activity // inferred from mutant phenotype /// 0004357 // glutamate-cysteine ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016595 // glutamate binding // inferred from direct assay /// 0016874 // ligase activity // inferred from electronic annotation /// 0043531 // ADP binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0050662 // coenzyme binding // inferred from physical interaction","chr6:53362141-53375703 (-) // 91.43 // p12.1"]
["11725820_s_at",-0.18344355,-0.38182068,-0.30625963,0.27665186,0.27036142,0.18344355,0.002252896,0.0012079482,-1.4479316,-0.53399354,1.4479316,"down","PAQR3",152559,"","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr4:79839093-79860581 (-) // 96.75 // q21.21"]
["11741807_a_at",-0.388484,-0.48270035,-0.5292263,0.5367689,0.40824223,0.388484,0.0009366118,0.00012665638,-1.8807421,-0.911302,1.8807421,"down","CMPK1",51727,"0006139 // nucleobase-containing compound metabolic process // inferred from electronic annotation /// 0006221 // pyrimidine nucleotide biosynthetic process // inferred from electronic annotation /// 0006222 // UMP biosynthetic process // traceable author statement /// 0009220 // pyrimidine ribonucleotide biosynthetic process // traceable author statement /// 0015949 // nucleobase-containing small molecule interconversion // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046939 // nucleotide phosphorylation // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004127 // cytidylate kinase activity // inferred from electronic annotation /// 0004849 // uridine kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016776 // phosphotransferase activity, phosphate group as acceptor // inferred from electronic annotation /// 0019201 // nucleotide kinase activity // inferred from electronic annotation /// 0019205 // nucleobase-containing compound kinase activity // inferred from electronic annotation","chr1:47799468-47844510 (+) // 95.23 // p33"]
["11720043_a_at",-0.36314106,-0.13594532,-0.16098118,0.13594532,0.19219685,0.17210674,0.0077620237,0.0063312976,-1.3074648,-0.38677216,1.3074648,"down","ABHD16A","79136 /// 7920","","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016787 // hydrolase activity // inferred from electronic annotation","chr6:31654734-31671221 (-) // 98.59 // p21.33"]
["11726006_at",-0.20005512,-0.19969368,-0.23531246,0.19969368,0.26638794,0.2168045,0.0006943628,4.602626e-5,-1.3559611,-0.4393158,1.3559611,"down","SLC30A1",7779,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006829 // zinc ion transport // inferred from sequence or structural similarity /// 0006829 // zinc ion transport // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from sequence or structural similarity /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0006882 // cellular zinc ion homeostasis // inferred from sequence or structural similarity /// 0006882 // cellular zinc ion homeostasis // inferred from electronic annotation /// 0046929 // negative regulation of neurotransmitter secretion // inferred from sequence or structural similarity /// 0046929 // negative regulation of neurotransmitter secretion // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070509 // calcium ion import // inferred from electronic annotation /// 0070574 // cadmium ion transmembrane transport // inferred from sequence or structural similarity /// 0070574 // cadmium ion transmembrane transport // inferred from electronic annotation /// 0071577 // zinc ion transmembrane transport // inferred from electronic annotation /// 0071584 // negative regulation of zinc ion import // inferred from sequence or structural similarity /// 0071584 // negative regulation of zinc ion import // inferred from electronic annotation /// 0071585 // detoxification of cadmium ion // inferred from electronic annotation /// 0090281 // negative regulation of calcium ion import // inferred from sequence or structural similarity /// 0090281 // negative regulation of calcium ion import // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030315 // T-tubule // inferred from sequence or structural similarity /// 0030315 // T-tubule // inferred from electronic annotation","0005385 // zinc ion transmembrane transporter activity // inferred from electronic annotation /// 0008324 // cation transmembrane transporter activity // inferred from electronic annotation /// 0019855 // calcium channel inhibitor activity // inferred from sequence or structural similarity /// 0019855 // calcium channel inhibitor activity // inferred from electronic annotation","chr1:211744909-211752099 (-) // 98.55 // q32.3"]
["11718974_at",-0.13998699,-0.21348667,-0.22679329,0.2651968,0.1953497,0.13998699,0.0019518846,0.00095576775,-1.3136675,-0.39360017,1.3136675,"down","LPL",4023,"0006629 // lipid metabolic process // traceable author statement /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred by curator /// 0006633 // fatty acid biosynthetic process // inferred from direct assay /// 0006633 // fatty acid biosynthetic process // inferred from sequence or structural similarity /// 0006641 // triglyceride metabolic process // inferred from sequence or structural similarity /// 0006644 // phospholipid metabolic process // inferred from sequence or structural similarity /// 0010744 // positive regulation of macrophage derived foam cell differentiation // inferred by curator /// 0010744 // positive regulation of macrophage derived foam cell differentiation // inferred from electronic annotation /// 0010886 // positive regulation of cholesterol storage // inferred from mutant phenotype /// 0010890 // positive regulation of sequestering of triglyceride // inferred from mutant phenotype /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0019432 // triglyceride biosynthetic process // inferred from electronic annotation /// 0019433 // triglyceride catabolic process // inferred from direct assay /// 0019433 // triglyceride catabolic process // inferred from sequence or structural similarity /// 0019433 // triglyceride catabolic process // inferred from electronic annotation /// 0034371 // chylomicron remodeling // inferred by curator /// 0034372 // very-low-density lipoprotein particle remodeling // inferred from direct assay /// 0034372 // very-low-density lipoprotein particle remodeling // inferred from sequence or structural similarity /// 0042157 // lipoprotein metabolic process // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0070328 // triglyceride homeostasis // inferred from genetic interaction","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation /// 0034361 // very-low-density lipoprotein particle // inferred from electronic annotation /// 0042627 // chylomicron // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004465 // lipoprotein lipase activity // inferred from direct assay /// 0004465 // lipoprotein lipase activity // inferred from sequence or structural similarity /// 0004465 // lipoprotein lipase activity // inferred from electronic annotation /// 0004620 // phospholipase activity // inferred from sequence or structural similarity /// 0004806 // triglyceride lipase activity // inferred from direct assay /// 0004806 // triglyceride lipase activity // inferred from sequence or structural similarity /// 0004806 // triglyceride lipase activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from direct assay /// 0008201 // heparin binding // inferred from electronic annotation /// 0008201 // heparin binding // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017129 // triglyceride binding // inferred from electronic annotation","chr8:19796283-19824770 (+) // 98.32 // p21.3"]
["11724848_a_at",-0.3102765,-0.5812092,-0.4537673,0.41036272,0.42787075,0.31027603,0.0016431456,0.00065273716,-1.7792313,-0.8312541,1.7792313,"down","DIXDC1",85458,"0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0021695 // cerebellar cortex development // not recorded /// 0021795 // cerebral cortex cell migration // inferred from electronic annotation /// 0021799 // cerebral cortex radially oriented cell migration // inferred from electronic annotation /// 0021846 // cell proliferation in forebrain // inferred from electronic annotation /// 0021869 // forebrain ventricular zone progenitor cell division // inferred from electronic annotation /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0030900 // forebrain development // not recorded /// 0032956 // regulation of actin cytoskeleton organization // inferred from electronic annotation /// 0043010 // camera-type eye development // not recorded /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0046328 // regulation of JNK cascade // not recorded /// 0050772 // positive regulation of axonogenesis // not recorded /// 0060070 // canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0060071 // Wnt receptor signaling pathway, planar cell polarity pathway // not recorded /// 0070507 // regulation of microtubule cytoskeleton organization // inferred from electronic annotation /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0005938 // cell cortex // not recorded /// 0030054 // cell junction // inferred from electronic annotation /// 0043025 // neuronal cell body // not recorded /// 0043679 // axon terminus // not recorded","0003779 // actin binding // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0031435 // mitogen-activated protein kinase kinase kinase binding // not recorded /// 0043015 // gamma-tubulin binding // inferred from direct assay","chr11:111807926-111893374 (+) // 93.97 // q23.1"]
["11757141_s_at",-0.1699009,-0.22678757,-0.17999649,0.1699009,0.29947758,0.19419289,0.0016760693,0.0006815215,-1.3318381,-0.41341877,1.3318381,"down","SNORA1","100302240 /// 654320 /// 677792 /// 677805 /// 677822 /// 684959 /// 692063 /// 692072 /// 79101","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr11:93463682-93463812 (-) // 97.01 // q21"]
["11726583_s_at",-0.17529011,-0.1900711,-0.24507713,0.17529011,0.20292282,0.18378639,0.00073790376,6.737106e-5,-1.3111317,-0.39081258,1.3111317,"down","CKAP4",10970,"","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005811 // lipid particle // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","","chr12:106631652-106641766 (-) // 92.08 // q23.3"]
["11726561_at",-0.4364276,-0.42897558,-0.32873106,0.35881662,0.34209347,0.32873106,0.0006217929,3.2134e-5,-1.6716334,-0.74125844,1.6716334,"down","SAP18",10284,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement","0000118 // histone deacetylase complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr13:21714249-21723223 (+) // 92.69 // q12.11"]
["11757141_s_at",-0.1699009,-0.22678757,-0.17999649,0.1699009,0.29947758,0.19419289,0.0016760693,0.0006815215,-1.3318381,-0.41341877,1.3318381,"down","SNORA8","100302240 /// 654320 /// 677792 /// 677805 /// 677822 /// 684959 /// 692063 /// 692072 /// 79101","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr11:93463682-93463812 (-) // 97.01 // q21"]
["11758157_s_at",-0.47362804,-0.34535027,-0.42543793,0.34535027,0.44492245,0.4180088,0.00073960464,6.848191e-5,-1.76243,-0.8175659,1.76243,"down","COQ10B",80219,"","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","","chr2:198339542-198339850 (+) // 94.81 // q33.1"]
["11763837_s_at",-0.34909678,-0.17077255,-0.2585926,0.20092106,0.17077255,0.27421665,0.0024523602,0.001375309,-1.3897166,-0.47479072,1.3897166,"down","UTY",7404,"0016568 // chromatin modification // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrY:15362895-15471104 (-) // 91.53 // q11.221"]
["11757141_s_at",-0.1699009,-0.22678757,-0.17999649,0.1699009,0.29947758,0.19419289,0.0016760693,0.0006815215,-1.3318381,-0.41341877,1.3318381,"down","SNORA18","100302240 /// 654320 /// 677792 /// 677805 /// 677822 /// 684959 /// 692063 /// 692072 /// 79101","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr11:93463682-93463812 (-) // 97.01 // q21"]
["11739963_x_at",-0.11073637,-0.0797143,-0.13272047,0.5401511,0.27750444,0.0797143,0.039920427,0.038751353,-1.3257852,-0.406847,1.3257852,"down","FDXACB1",91893,"0006432 // phenylalanyl-tRNA aminoacylation // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from electronic annotation","","0000049 // tRNA binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004826 // phenylalanine-tRNA ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation","chr11:111744781-111750217 (-) // 88.2 // q23.1"]
["11722239_a_at",-0.20619488,-0.1383915,-0.13793755,0.13793755,0.4254551,0.1577425,0.01500758,0.013656768,-1.3206239,-0.40121967,1.3206239,"down","HIPK1",204851,"0001654 // eye development // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from direct assay /// 0007224 // smoothened signaling pathway // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0010803 // regulation of tumor necrosis factor-mediated signaling pathway // inferred from direct assay /// 0010842 // retina layer formation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from sequence or structural similarity /// 0048596 // embryonic camera-type eye morphogenesis // inferred from electronic annotation /// 0060059 // embryonic retina morphogenesis in camera-type eye // inferred from electronic annotation /// 0060216 // definitive hemopoiesis // inferred from sequence or structural similarity /// 0060235 // lens induction in camera-type eye // inferred from electronic annotation /// 0061072 // iris morphogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016605 // PML body // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr1:114471813-114520491 (+) // 98.78 // p13.2"]
["11716017_at",-0.20665741,-0.16406155,-0.1299696,0.31129265,0.27362442,0.1299696,0.0036543524,0.0024346611,-1.3242649,-0.40519172,1.3242649,"down","MAL2",114569,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr8:120220605-120257913 (+) // 88.06 // q24.12"]
["11739591_s_at",-0.2174778,-0.19998074,-0.1552,0.31595325,0.1552,0.20205116,0.0022963006,0.0012569329,-1.3335645,-0.41528767,1.3335645,"down","MINA",84864,"0042254 // ribosome biogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay","","chr3:97660660-97691295 (-) // 99.04 // q11.2"]
["11721524_s_at",-0.32655048,-0.39052057,-0.3656826,0.34645557,0.34308863,0.32655048,0.00035482424,3.6837796e-6,-1.6240726,-0.69961613,1.6240726,"down","ZNF706",51123,"","0005622 // intracellular // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:102209271-102217960 (-) // 97.31 // q22.3"]
["11718057_at",-0.13080502,-0.15976906,-0.12062645,0.31625938,0.31862736,0.12062645,0.005649187,0.004298929,-1.3093988,-0.38890457,1.3093988,"down","UTP11L",51118,"0006364 // rRNA processing // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from mutant phenotype /// 0007399 // nervous system development // inferred from mutant phenotype /// 0048011 // nerve growth factor receptor signaling pathway // inferred from mutant phenotype","0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0032040 // small-subunit processome // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:38474929-38490494 (+) // 67.45 // p34.3"]
["11732140_at",-0.25228596,-0.35043907,-0.14784908,0.1624484,0.14784908,0.20749187,0.003512565,0.0023008662,-1.3405154,-0.42278782,1.3405154,"down","SYNJ2BP-COX16","100529257 /// 51241","","0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","","chr14:70791798-70826448 (-) // 78.09 // q24.2"]
["11724837_at",-0.30627775,-0.41516542,-0.23214912,0.29166222,0.23214912,0.3071537,0.0014867174,0.0005047034,-1.5103182,-0.59485245,1.5103182,"down","NCEH1",57552,"0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006805 // xenobiotic metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004091 // carboxylesterase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017171 // serine hydrolase activity // inferred from electronic annotation /// 0042301 // phosphate ion binding // inferred from electronic annotation","chr3:172348038-172429008 (-) // 97.27 // q26.31"]
["11723476_at",-0.25245142,-0.1779244,-0.21550727,0.17792416,0.33249855,0.24237537,0.0017193909,0.00072064763,-1.3814919,-0.46622705,1.3814919,"down","SLC17A5",26503,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006820 // anion transport // traceable author statement /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0015739 // sialic acid transport // inferred from direct assay /// 0015739 // sialic acid transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005765 // lysosomal membrane // traceable author statement /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation","0005351 // sugar:hydrogen symporter activity // traceable author statement /// 0015136 // sialic acid transmembrane transporter activity // inferred from direct assay /// 0015136 // sialic acid transmembrane transporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation","chr6:74303101-74363914 (-) // 86.65 // q13"]
["11748266_a_at",-0.15512562,-0.12569714,-0.18924713,0.3693695,0.12569714,0.27660275,0.0061838487,0.0048538316,-1.3322946,-0.41391307,1.3322946,"down","RETSAT",54884,"0042572 // retinol metabolic process // not recorded /// 0042572 // retinol metabolic process // inferred from sequence or structural similarity /// 0042572 // retinol metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005640 // nuclear outer membrane // inferred from sequence or structural similarity /// 0005640 // nuclear outer membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // not recorded /// 0005789 // endoplasmic reticulum membrane // inferred from sequence or structural similarity /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from sequence or structural similarity /// 0031965 // nuclear membrane // inferred from electronic annotation","0016491 // oxidoreductase activity // inferred from sequence or structural similarity /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0051786 // all-trans-retinol 13,14-reductase activity // not recorded /// 0051786 // all-trans-retinol 13,14-reductase activity // inferred from sequence or structural similarity /// 0051786 // all-trans-retinol 13,14-reductase activity // inferred from electronic annotation","chr2:85570233-85581689 (-) // 100.0 // p11.2"]

{"sheet":"Raw_Data","index":6,"n_rows":49397,"n_cols":25,"rows_kept":2250,"cut":true,"merged":[[0,1,0,6],[0,7,0,12],[0,13,0,14],[0,15,0,18],[0,19,0,24]],"bounds":{"rows_first":1000,"rows_last":250,"rows_between":1000,"halvings":1}}
["Probe","Raw Data","Raw Data","Raw Data","Raw Data","Raw Data","Raw Data","Normalized Data","Normalized Data","Normalized Data","Normalized Data","Normalized Data","Normalized Data","P-value","P-value","Fold change","Fold change","Fold change","Fold change","Annotation","Annotation","Annotation","Annotation","Annotation","Annotation"]
["probeSet","G416-1_(PrimeView).CEL","G416-2_(PrimeView).CEL","G416-3_(PrimeView).CEL","G415-1_(PrimeView).CEL","G415-2_(PrimeView).CEL","G415-3_(PrimeView).CEL","G416-1_(PrimeView).CEL","G416-2_(PrimeView).CEL","G416-3_(PrimeView).CEL","G415-1_(PrimeView).CEL","G415-2_(PrimeView).CEL","G415-3_(PrimeView).CEL","Corrected p-value","P-value","Fold change","Log Fold change","Absolute Fold change","Regulation","Gene Symbol","Entrez Gene","Gene Ontology Biological Process","Gene Ontology Cellular Component","Gene Ontology Molecular Function","Alignments"]
["11764191_at",42.45521,42.846725,47.182117,48.206062,50.12308,49.010384,-0.16778564,-0.15454245,-0.015487194,0.015487194,0.07174778,0.039360046,0.22754177,0.039403223,-1.1132699,-0.15480343,1.1132699,"down","","","","","","chr17:62342072-62343073 (+) // 99.8 // q23.3"]
["11727050_a_at",216.72708,196.2957,201.70195,317.3143,245.9638,272.27625,-0.09128332,-0.2341342,-0.19493723,0.45874977,0.091282845,0.23790836,0.15909134,0.019224945,-1.3529407,-0.43609858,1.3529407,"down","PPP6C",5537,"0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0006470 // protein dephosphorylation // inferred from direct assay /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006470 // protein dephosphorylation // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // inferred from direct assay /// 0004722 // protein serine/threonine phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:127908852-127952218 (-) // 96.0 // q33.3"]
["11750344_a_at",109.851616,139.88802,128.22057,124.88956,129.2664,147.04207,-0.22893143,0.11978483,-0.005859375,-0.043834686,0.005859852,0.19174147,0.77943224,0.5120427,-1.0640684,-0.089590944,1.0640684,"down","ALOX15",246,"0006629 // lipid metabolic process // non-traceable author statement /// 0006691 // leukotriene metabolic process // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0019370 // leukotriene biosynthetic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005506 // iron ion binding // inferred from electronic annotation /// 0016165 // lipoxygenase activity // inferred from electronic annotation /// 0016165 // lipoxygenase activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050473 // arachidonate 15-lipoxygenase activity // inferred from electronic annotation","chr17:4534590-4545230 (-) // 97.77 // p13.2"]
["11759307_at",409.15594,386.52185,392.66833,518.9525,452.88498,422.52637,-0.023195267,-0.105296135,-0.08253479,0.3197565,0.123298645,0.023195267,0.29787663,0.06710658,-1.1693922,-0.22575891,1.1693922,"down","RREB1",6239,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0016604 // nuclear body // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:7108053-7252213 (+) // 95.0 // p24.3"]
["11761403_at",11.557102,11.950109,9.531462,11.002469,10.316467,13.80416,0.035476208,0.08372021,-0.24253416,-0.035476208,-0.12835455,0.29179955,0.8491131,0.6344239,-1.059783,-0.08376887,1.059783,"down","ISCU",23479,"0009399 // nitrogen fixation // traceable author statement /// 0016226 // iron-sulfur cluster assembly // traceable author statement /// 0016226 // iron-sulfur cluster assembly // inferred from electronic annotation","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay","0005506 // iron ion binding // traceable author statement /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0032947 // protein complex scaffold // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation","chr12:108956373-108961684 (+) // 80.72 // q23.3"]
["11757172_at",36.920017,40.55445,40.505848,34.75575,40.440247,45.305477,-0.13255787,0.00289917,0.0011692047,-0.2197094,-0.0011692047,0.1627245,0.94806445,0.85404164,-1.0163836,-0.02344507,1.0163836,"down","SNORA47",677828,"","","","chr5:76376258-76376396 (-) // 100.0 // q13.3"]
["11763268_at",75.10233,85.91318,76.57439,82.08029,80.28878,75.92014,-0.06217289,0.13184929,-0.034168243,0.06600618,0.034167767,-0.04654789,0.97700006,0.9346459,-1.0041949,-0.0060392395,1.0041949,"down","FAM120B",84498,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","","chr6:170599790-170716404 (+) // 88.48 // q27"]
["11727695_a_at",12.248045,18.976711,16.86775,14.592335,17.919859,16.400873,-0.44146872,0.19020987,0.02024746,-0.1888094,0.10753918,-0.02024746,0.9444053,0.8452407,-1.0303714,-0.04316449,1.0303714,"down","KLRC4-KLRK1 /// KLRK1","100528032 /// 22914","0002223 // stimulatory C-type lectin receptor signaling pathway // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0030101 // natural killer cell activation // inferred from electronic annotation /// 0030101 // natural killer cell activation // traceable author statement /// 0031295 // T cell costimulation // traceable author statement /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from electronic annotation /// 0045954 // positive regulation of natural killer cell mediated cytotoxicity // inferred from electronic annotation /// 0050776 // regulation of immune response // traceable author statement /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0032394 // MHC class Ib receptor activity // inferred from electronic annotation /// 0042288 // MHC class I protein binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr12:10524951-10542640 (-) // 54.21 // p13.2"]
["11730840_a_at",170.38954,172.58557,160.72295,140.05618,136.01543,122.5746,0.18354607,0.20202112,0.09928465,-0.099285126,-0.1415205,-0.29163122,0.09763451,0.0069413246,1.264964,0.3390963,1.264964,"up","ZMYND8",23613,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity","0001106 // RNA polymerase II transcription corepressor activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070491 // repressing transcription factor binding // inferred from sequence or structural similarity","chr20:45837858-45985474 (-) // 98.92 // q13.12"]
["11755175_a_at",214.61575,211.51372,215.96745,193.97818,182.27568,189.04149,0.08343315,0.062428474,0.09249115,-0.062428474,-0.1522007,-0.09961939,0.06261726,0.0025922146,1.1361871,0.18420039,1.1361871,"up","HSPA12A",259217,"0006950 // response to stress // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation","chr10:118430703-118609716 (-) // 94.89 // q25.3"]
["11731820_at",27.046974,25.95207,25.649479,27.902655,29.01009,30.873354,-0.022467613,-0.08208513,-0.09900522,0.022467613,0.07861996,0.16842747,0.2029982,0.03119994,-1.1155003,-0.15769094,1.1155003,"down","ADAM11",4185,"0006508 // proteolysis // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // traceable author statement /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from sequence or structural similarity","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0005178 // integrin binding // traceable author statement /// 0008237 // metallopeptidase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation","chr17:42836398-42859214 (+) // 96.66 // q21.31"]
["11731123_a_at",8.539851,9.202938,8.367172,9.314619,9.605912,10.551617,-0.1165843,-0.008701086,-0.14605522,0.008701324,0.05312705,0.18859673,0.2902378,0.063640505,-1.128121,-0.17392184,1.128121,"down","TMEM200A",114801,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:130758261-130764212 (+) // 93.26 // q23.1"]
["11761012_x_at",80.10017,96.2229,92.786674,87.61914,99.72291,101.16967,-0.23834419,0.026231289,-0.026231766,-0.10890341,0.07777548,0.09855509,0.69028324,0.3840683,-1.0732037,-0.10192391,1.0732037,"down","POM121L8P",29797,"","","","chr20:23969351-23971719 (+) // 91.03 // p11.21 /// chr22:21636713-21639084 (+) // 93.78 // q11.21 /// chr22:18833988-18836359 (+) // 93.41 // q11.21 /// chr22:24647516-24649886 (+) // 92.32 // q11.23 /// chr22:21043862-21046233 (+) // 91.36 // q11.21 /// chr22:21480010-21482381 (-) // 93.66 // q11.21 /// chr22:22984642-22987012 (-) // 92.36 // q11.22 /// chr22:25052816-25055186 (-) // 92.32 // q11.23"]
["11763593_a_at",65.08015,61.38974,63.99687,56.76413,62.315174,65.40135,0.043425083,-0.04079485,0.019208431,-0.15381289,-0.019208908,0.05052805,0.7718164,0.50020015,1.0339102,0.048110824,1.0339102,"up","RGNEF",64283,"0021955 // central nervous system neuron axonogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0060052 // neurofilament cytoskeleton organization // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:73181727-73237817 (+) // 99.22 // q13.2"]
["11730317_at",8.579939,8.892872,8.4238405,7.278363,8.535193,8.7414055,0.0037715435,0.055453777,-0.022717476,-0.23358154,-0.003771782,0.03066969,0.70219237,0.39954928,1.0577978,0.08106387,1.0577978,"up","RGS7BP",401190,"0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","","chr5:63801773-63908145 (+) // 89.65 // q12.3"]
["11743747_a_at",32.73406,35.749935,37.29822,55.457535,42.7945,43.47067,-0.28747368,-0.16032553,-0.09915924,0.47311687,0.09915924,0.121776104,0.21717292,0.035991043,-1.3320702,-0.41367015,1.3320702,"down","PHKA1",5255,"0005975 // carbohydrate metabolic process // traceable author statement /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005976 // polysaccharide metabolic process // inferred from electronic annotation /// 0005977 // glycogen metabolic process // traceable author statement /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0005980 // glycogen catabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006091 // generation of precursor metabolites and energy // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046777 // protein autophosphorylation // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005964 // phosphorylase kinase complex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds // inferred from electronic annotation /// 0004689 // phosphorylase kinase activity // inferred from electronic annotation /// 0004689 // phosphorylase kinase activity // traceable author statement /// 0005516 // calmodulin binding // inferred from electronic annotation","chrX:71798663-71934043 (-) // 98.84 // q13.1"]
["11716432_a_at",245.70453,270.88977,282.99512,180.06078,205.38963,211.9748,0.106515884,0.24729729,0.31036854,-0.34192467,-0.15204525,-0.106515884,0.12100262,0.010932983,1.3393712,0.42155585,1.3393712,"up","MNAT1",4331,"0000079 // regulation of cyclin-dependent protein kinase activity // traceable author statement /// 0000080 // G1 phase of mitotic cell cycle // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0000718 // nucleotide-excision repair, DNA damage removal // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006360 // transcription from RNA polymerase I promoter // traceable author statement /// 0006361 // transcription initiation from RNA polymerase I promoter // traceable author statement /// 0006362 // transcription elongation from RNA polymerase I promoter // traceable author statement /// 0006363 // termination of RNA polymerase I transcription // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006370 // 7-methylguanosine mRNA capping // traceable author statement /// 0006461 // protein complex assembly // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007512 // adult heart development // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0021591 // ventricular system development // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0044236 // multicellular organismal metabolic process // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050434 // positive regulation of viral transcription // traceable author statement /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005675 // holo TFIIH complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0004672 // protein kinase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008094 // DNA-dependent ATPase activity // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0008353 // RNA polymerase II carboxy-terminal domain kinase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction","chr14:61201458-61435480 (+) // 94.24 // q23.1"]
["11734196_a_at",273.81314,279.52786,255.33167,328.86484,251.80405,263.09814,0.028795242,0.058595657,-0.07202387,0.29309845,-0.0920949,-0.028795242,0.8807801,0.69867074,-1.0369027,-0.052280474,1.0369027,"down","SAMD4B",55095,"","","","chr19:39842454-39875535 (+) // 90.83 // q13.2"]
["11736790_x_at",39.414795,31.620705,35.54979,38.477676,46.171467,39.961452,0.017357826,-0.30050993,-0.13153839,-0.017357826,0.24562216,0.037229538,0.42471898,0.13632795,-1.170178,-0.22672807,1.170178,"down","FBXO4",26272,"0000209 // protein polyubiquitination // inferred from direct assay /// 0000723 // telomere maintenance // inferred from mutant phenotype /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0031146 // SCF-dependent proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0031398 // positive regulation of protein ubiquitination // inferred from direct assay","0000151 // ubiquitin ligase complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0019005 // SCF ubiquitin ligase complex // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction","chr5:41925355-41935423 (+) // 83.91 // p13.1"]
["11745745_a_at",745.38477,793.55896,727.7906,766.2041,635.22833,862.976,-0.019871712,0.07048035,-0.054333687,0.019871712,-0.25058174,0.19146347,0.97687525,0.93380696,1.0082409,0.011840439,1.0082409,"up","SLC39A1",27173,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // traceable author statement /// 0006829 // zinc ion transport // inferred from electronic annotation /// 0030001 // metal ion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0071577 // zinc ion transmembrane transport // inferred from mutant phenotype /// 0071577 // zinc ion transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0005102 // receptor binding // inferred from electronic annotation /// 0005385 // zinc ion transmembrane transporter activity // inferred from electronic annotation /// 0022890 // inorganic cation transmembrane transporter activity // traceable author statement /// 0046873 // metal ion transmembrane transporter activity // inferred from electronic annotation","chr1:153931651-153940097 (-) // 92.53 // q21.3"]
["11716949_s_at",236.1902,284.80292,299.9909,263.06094,276.38995,295.7233,-0.24838543,0.021629333,0.09658432,-0.09293747,-0.021629333,0.07591343,0.92755127,0.8049389,-1.0213704,-0.03050617,1.0213704,"down","TM9SF3",56889,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005488 // binding // inferred from direct assay","chr10:98277867-98346797 (-) // 96.48 // q24.1"]
["11715860_a_at",280.4199,290.08545,260.89554,265.8963,260.43875,269.2708,0.06762791,0.11651707,-0.036488533,-0.009097099,-0.039016724,0.009097099,0.57798773,0.2582252,1.0440743,0.062224377,1.0440743,"up","RIC8A",60626,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0008542 // visual learning // inferred from electronic annotation /// 0009416 // response to light stimulus // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0001965 // G-protein alpha-subunit binding // inferred from electronic annotation /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // inferred from electronic annotation","chr11:207118-215113 (+) // 82.86 // p15.5"]
["11753470_a_at",303.59717,264.10635,273.80026,322.92737,310.49374,300.5274,0.0073308945,-0.19370842,-0.1417036,0.09638214,0.039736748,-0.0073308945,0.3381793,0.08638905,-1.1113318,-0.15228964,1.1113318,"down","TIA1",7072,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0017148 // negative regulation of translation // inferred from electronic annotation /// 0042036 // negative regulation of cytokine biosynthetic process // inferred from electronic annotation /// 0048024 // regulation of nuclear mRNA splicing, via spliceosome // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008143 // poly(A) RNA binding // traceable author statement /// 0017091 // AU-rich element binding // inferred from electronic annotation","chr2:70443805-70475586 (-) // 95.68 // p13.3"]
["11737412_at",8.43924,8.390952,8.877425,8.585828,9.157327,8.372245,-0.012422085,-0.020700455,0.060606003,0.012421846,0.105391264,-0.023920774,0.86112803,0.6579821,-1.015462,-0.02213631,1.015462,"down","SCML4",256380,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr6:108023360-108145521 (-) // 84.48 // q21"]
["11733237_a_at",17.661076,23.865162,15.785132,18.736956,19.59864,20.78494,-0.11774683,0.31658602,-0.27975368,-0.03243351,0.03243351,0.117218494,0.8985047,0.7367393,-1.0468425,-0.06604434,1.0468425,"down","RPGRIP1L",23322,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008589 // regulation of smoothened signaling pathway // inferred from electronic annotation /// 0021532 // neural tube patterning // inferred from electronic annotation /// 0021537 // telencephalon development // inferred from electronic annotation /// 0021549 // cerebellum development // inferred from electronic annotation /// 0021670 // lateral ventricle development // inferred from electronic annotation /// 0021772 // olfactory bulb development // inferred from electronic annotation /// 0022038 // corpus callosum development // inferred from electronic annotation /// 0035108 // limb morphogenesis // inferred from electronic annotation /// 0035115 // embryonic forelimb morphogenesis // inferred from electronic annotation /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from electronic annotation /// 0043010 // camera-type eye development // inferred from electronic annotation /// 0043584 // nose development // inferred from electronic annotation /// 0045744 // negative regulation of G-protein coupled receptor protein signaling pathway // inferred from direct assay /// 0060039 // pericardium development // inferred from electronic annotation /// 0060322 // head development // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0005923 // tight junction // inferred from electronic annotation /// 0005929 // cilium // inferred from direct assay /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from direct assay /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0035085 // cilium axoneme // inferred from direct assay /// 0035085 // cilium axoneme // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0031870 // thromboxane A2 receptor binding // inferred from physical interaction","chr16:53633817-53737742 (-) // 96.81 // q12.2"]
["11732837_a_at",29.156479,26.370165,32.517227,37.471806,36.399296,40.377487,-0.23874092,-0.38365078,-0.08135319,0.1232481,0.08135319,0.23099375,0.15382542,0.017919049,-1.3011434,-0.37977996,1.3011434,"down","IL37",27178,"0001960 // negative regulation of cytokine-mediated signaling pathway // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0005149 // interleukin-1 receptor binding // non-traceable author statement /// 0005149 // interleukin-1 receptor binding // traceable author statement /// 0005152 // interleukin-1 receptor antagonist activity // inferred from electronic annotation","chr2:113670547-113676459 (+) // 95.9 // q13"]
["11747580_a_at",158.38956,166.99889,163.00436,158.96227,140.13846,162.57672,-0.02142477,0.05493641,0.02000904,-0.016217709,-0.19804955,0.016218185,0.6184263,0.29846472,1.0598475,0.08385666,1.0598475,"up","PGS1",9489,"0006655 // phosphatidylglycerol biosynthetic process // inferred from sequence or structural similarity /// 0006655 // phosphatidylglycerol biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0032049 // cardiolipin biosynthetic process // inferred from sequence or structural similarity /// 0046339 // diacylglycerol metabolic process // inferred from sequence or structural similarity","0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0008444 // CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity // inferred from sequence or structural similarity /// 0008444 // CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016780 // phosphotransferase activity, for other substituted phosphate groups // inferred from electronic annotation","chr17:76374731-76420637 (+) // 98.17 // q25.3"]
["11744584_a_at",534.49396,499.3677,453.7036,470.1356,426.0589,436.16788,0.21076012,0.11268902,-0.025663376,0.025663376,-0.116360664,-0.08253002,0.40550637,0.12412137,1.1149696,0.15700439,1.1149696,"up","HYI",81888,"","","0008903 // hydroxypyruvate isomerase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation","chr1:43916277-43919346 (-) // 92.28 // p34.2"]
["11720005_at",14.9478,15.00007,16.568752,12.182629,15.56401,17.870987,-0.03165841,-0.026622295,0.1168735,-0.32676625,0.026622295,0.22602773,0.92808086,0.8062189,1.0311372,0.044236343,1.0311372,"up","NPTX2",4885,"0007268 // synaptic transmission // non-traceable author statement","0005576 // extracellular region // inferred from electronic annotation","0030246 // carbohydrate binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:98246596-98259181 (+) // 94.95 // q22.1"]
["11731753_a_at",9.62825,7.918989,7.4290905,6.338241,7.39127,8.467997,0.32802272,0.046065092,-0.04606533,-0.27516842,-0.05342841,0.14276958,0.6698803,0.3579556,1.1260597,0.17128325,1.1260597,"up","ZNF577",84765,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:52374552-52391229 (-) // 79.47 // q13.41"]
["11758622_s_at",1225.7354,1315.0769,1325.7157,1049.9717,1117.8158,1204.0972,0.0128479,0.11434746,0.1259718,-0.21044922,-0.12011719,-0.0128479,0.23549823,0.042084076,1.1477914,0.19886045,1.1477914,"up","MXRA7",439921,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr17:74675651-74676010 (-) // 99.72 // q25.1 /// chr2:162196027-162196386 (-) // 99.16 // q24.2"]
["11762600_a_at",39.52136,39.006317,40.273273,50.44104,36.231903,39.748436,-0.0041327477,-0.02305746,0.02305746,0.34783268,-0.12950468,0.0041327477,0.843567,0.62484926,-1.053749,-0.075531214,1.053749,"down","SEC31B",25956,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0012507 // ER to Golgi transport vesicle membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0003954 // NADH dehydrogenase activity // inferred from electronic annotation /// 0008137 // NADH dehydrogenase (ubiquinone) activity // inferred from electronic annotation","chr10:102265384-102289628 (-) // 99.9 // q24.31"]
["11736940_at",43.36853,44.721165,51.770725,42.009033,49.600727,55.072834,-0.119010925,-0.074701786,0.136477,-0.16495991,0.074701786,0.2256813,0.86493516,0.66671425,-1.0455192,-0.0642196,1.0455192,"down","CHRNB4",1143,"0001508 // regulation of action potential // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006939 // smooth muscle contraction // inferred from electronic annotation /// 0006940 // regulation of smooth muscle contraction // inferred from electronic annotation /// 0007165 // signal transduction // inferred from direct assay /// 0007268 // synaptic transmission // traceable author statement /// 0007271 // synaptic transmission, cholinergic // traceable author statement /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0035094 // response to nicotine // inferred from electronic annotation /// 0035095 // behavioral response to nicotine // inferred from electronic annotation /// 0042391 // regulation of membrane potential // inferred from electronic annotation /// 0046928 // regulation of neurotransmitter secretion // non-traceable author statement /// 0060084 // synaptic transmission involved in micturition // inferred from mutant phenotype /// 0060084 // synaptic transmission involved in micturition // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred by curator /// 0005892 // acetylcholine-gated channel complex // inferred from direct assay /// 0005892 // acetylcholine-gated channel complex // traceable author statement /// 0005892 // acetylcholine-gated channel complex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004889 // acetylcholine-activated cation-selective channel activity // traceable author statement /// 0004889 // acetylcholine-activated cation-selective channel activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0015276 // ligand-gated ion channel activity // traceable author statement /// 0015464 // acetylcholine receptor activity // inferred from direct assay /// 0042166 // acetylcholine binding // inferred from electronic annotation","chr15:78916514-78933587 (-) // 73.27 // q25.1"]
["11741412_at",7.804452,7.110263,7.1229315,6.704716,7.4445553,6.5987806,0.13311052,-0.0012841225,0.0012841225,-0.086010695,0.064998865,-0.10898757,0.6005887,0.2804571,1.0626771,0.087703355,1.0626771,"up","LHX9",56956,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from sequence or structural similarity /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0008585 // female gonad development // inferred from electronic annotation /// 0035262 // gonad morphogenesis // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from sequence or structural similarity /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:197886516-197899273 (+) // 97.89 // q31.3"]
["11753606_x_at",1135.725,1122.4584,1110.5721,1021.60187,952.5052,1002.0724,0.09254551,0.07559395,0.060235023,-0.060235023,-0.16126919,-0.08808136,0.08115887,0.0047258455,1.1323501,0.17932007,1.1323501,"up","CDC42",998,"0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0003334 // keratinocyte development // inferred from electronic annotation /// 0006184 // GTP catabolic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0007030 // Golgi organization // inferred from sequence or structural similarity /// 0007088 // regulation of mitosis // inferred from electronic annotation /// 0007097 // nuclear migration // inferred from electronic annotation /// 0007163 // establishment or maintenance of cell polarity // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030225 // macrophage differentiation // traceable author statement /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0031274 // positive regulation of pseudopodium assembly // inferred from direct assay /// 0031295 // T cell costimulation // traceable author statement /// 0031333 // negative regulation of protein complex assembly // inferred from physical interaction /// 0031424 // keratinization // inferred from electronic annotation /// 0031647 // regulation of protein stability // inferred from electronic annotation /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from electronic annotation /// 0034332 // adherens junction organization // inferred from electronic annotation /// 0034613 // cellular protein localization // inferred from electronic annotation /// 0035088 // establishment or maintenance of apical/basal cell polarity // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0042176 // regulation of protein catabolic process // inferred from electronic annotation /// 0042692 // muscle cell differentiation // traceable author statement /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0043497 // regulation of protein heterodimerization activity // inferred from electronic annotation /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0045859 // regulation of protein kinase activity // inferred from electronic annotation /// 0046330 // positive regulation of JNK cascade // inferred from electronic annotation /// 0046847 // filopodium assembly // inferred from electronic annotation /// 0048664 // neuron fate determination // inferred from electronic annotation /// 0048730 // epidermis morphogenesis // inferred from electronic annotation /// 0051017 // actin filament bundle assembly // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051149 // positive regulation of muscle cell differentiation // traceable author statement /// 0051246 // regulation of protein metabolic process // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051489 // regulation of filopodium assembly // inferred from direct assay /// 0051647 // nucleus localization // inferred from electronic annotation /// 0051683 // establishment of Golgi localization // inferred from sequence or structural similarity /// 0051988 // regulation of attachment of spindle microtubules to kinetochore // inferred from mutant phenotype /// 0060070 // canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0060684 // epithelial-mesenchymal cell signaling // inferred from electronic annotation /// 0060789 // hair follicle placode formation // inferred from electronic annotation /// 0071338 // positive regulation of hair follicle cell proliferation // inferred from electronic annotation /// 0071777 // positive regulation of cell cycle cytokinesis // inferred from mutant phenotype /// 0072384 // organelle transport along microtubule // inferred from sequence or structural similarity /// 0090136 // epithelial cell-cell adhesion // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0000139 // Golgi membrane // inferred from sequence or structural similarity /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030141 // secretory granule // inferred from electronic annotation /// 0030175 // filopodium // inferred from direct assay /// 0030496 // midbody // inferred from direct assay /// 0030496 // midbody // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from direct assay /// 0043025 // neuronal cell body // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation /// 0051233 // spindle midzone // inferred from direct assay /// 0071944 // cell periphery // inferred from electronic annotation /// 0072686 // mitotic spindle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from direct assay /// 0019901 // protein kinase binding // inferred from physical interaction /// 0030742 // GTP-dependent protein binding // inferred from electronic annotation /// 0031435 // mitogen-activated protein kinase kinase kinase binding // inferred from electronic annotation /// 0031996 // thioesterase binding // inferred from physical interaction","chr1:22404971-22418010 (+) // 100.0 // p36.12 /// chr4:22728997-22729573 (-) // 98.96 // p15.2"]
["11761646_at",21.198643,34.098846,31.363228,22.81599,31.795376,31.507439,-0.56841135,0.11733961,-0.0033092499,-0.46233797,0.016433716,0.0033092499,0.99573547,0.988821,-1.0027268,-0.0039285775,1.0027268,"down","SRGAP3",9901,"0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005096 // GTPase activator activity // inferred from electronic annotation","chr3:9048662-9166601 (-) // 80.34 // p25.3"]
["11718707_a_at",121.92342,122.31862,108.34427,95.969154,78.71899,81.872665,0.25784302,0.26251125,0.08749008,-0.08749008,-0.3733492,-0.316679,0.124172926,0.011576401,1.3772472,0.46178755,1.3772472,"up","IGF1R",3480,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0006955 // immune response // inferred from mutant phenotype /// 0007165 // signal transduction // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0014065 // phosphatidylinositol 3-kinase cascade // inferred by curator /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030010 // establishment of cell polarity // inferred from electronic annotation /// 0030238 // male sex determination // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0030879 // mammary gland development // inferred from electronic annotation /// 0031017 // exocrine pancreas development // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0032467 // positive regulation of cytokinesis // inferred from electronic annotation /// 0033197 // response to vitamin E // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043409 // negative regulation of MAPK cascade // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from mutant phenotype /// 0045768 // positive regulation of anti-apoptosis // inferred from electronic annotation /// 0046328 // regulation of JNK cascade // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048009 // insulin-like growth factor receptor signaling pathway // inferred from direct assay /// 0048009 // insulin-like growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // inferred from direct assay /// 0051054 // positive regulation of DNA metabolic process // inferred from electronic annotation /// 0051262 // protein tetramerization // inferred from direct assay /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0051389 // inactivation of MAPKK activity // inferred from direct assay /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0051898 // negative regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0060740 // prostate gland epithelium morphogenesis // inferred from electronic annotation /// 0090031 // positive regulation of steroid hormone biosynthetic process // inferred from electronic annotation","0005792 // microsome // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred by curator /// 0005901 // caveola // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005010 // insulin-like growth factor-activated receptor activity // inferred from direct assay /// 0005010 // insulin-like growth factor-activated receptor activity // traceable author statement /// 0005158 // insulin receptor binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005520 // insulin-like growth factor binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0031994 // insulin-like growth factor I binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from physical interaction /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation /// 0043559 // insulin binding // inferred from physical interaction /// 0043560 // insulin receptor substrate binding // inferred from physical interaction /// 0043560 // insulin receptor substrate binding // inferred from electronic annotation","chr15:99192272-99507759 (+) // 97.28 // q26.3"]
["11722086_x_at",19.176527,15.929978,17.528765,17.999199,17.850454,16.45508,0.11649895,-0.15109825,-0.013118267,0.025090218,0.013118267,-0.10430956,0.98191935,0.94758844,1.0042565,0.0061277803,1.0042565,"up","SEPT1",1731,"0007049 // cell cycle // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0031105 // septin complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation","chr16:30389455-30394171 (-) // 96.24 // p11.2"]
["11742820_s_at",11.482764,12.058592,14.743312,10.217399,11.363818,12.19642,-0.035295486,0.035295725,0.32529497,-0.20373774,-0.050317764,0.051692247,0.5763126,0.25649673,1.1296581,0.1758862,1.1296581,"up","OGN",4969,"0048662 // negative regulation of smooth muscle cell proliferation // inferred from sequence or structural similarity","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation","chr9:95146099-95166937 (-) // 99.63 // q22.31"]
["11740952_at",42.1176,42.47795,43.501842,35.361225,38.417847,34.04944,0.06632328,0.078614235,0.11297655,-0.18593168,-0.06632328,-0.24046898,0.11241219,0.0093404995,1.1893824,0.25021267,1.1893824,"up","OTUD7A",161725,"0006508 // proteolysis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:31775328-31947542 (-) // 88.66 // q13.3"]
["11746041_a_at",1272.3157,1260.3104,1256.0281,1487.2733,1320.2368,1243.8894,0.0068387985,-0.0068387985,-0.011749268,0.23205185,0.060178757,-0.025759697,0.6093485,0.28934646,-1.0663936,-0.092740044,1.0663936,"down","TRA2B",6434,"0000375 // RNA splicing, via transesterification reactions // traceable author statement /// 0000381 // regulation of alternative nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0048026 // positive regulation of nuclear mRNA splicing, via spliceosome // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr3:185634536-185655818 (-) // 94.9 // q27.2"]
["11762973_at",13.628101,15.126203,12.843014,12.73871,14.825599,15.224906,-0.06075287,0.08971238,-0.14635372,-0.15811849,0.06075287,0.09909582,0.8937594,0.7263164,-1.0279058,-0.03970809,1.0279058,"down","","","","0005576 // extracellular region // inferred from electronic annotation","","chr2:31393687-31394575 (-) // 65.65 // p23.1"]
["11744564_a_at",393.37033,441.40793,438.1775,350.39282,375.93475,387.30063,0.011217117,0.1774416,0.16684437,-0.15569782,-0.05418873,-0.011217117,0.25426522,0.04895358,1.1425064,0.1922022,1.1425064,"up","PPWD1",23398,"0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006457 // protein folding // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation","chr5:64859125-64883376 (+) // 99.43 // q12.3"]
["11759054_at",6.586318,6.6317406,6.0701523,6.404748,7.1819916,7.5188065,-0.004957676,0.004957676,-0.122697115,-0.045288086,0.11995411,0.18607378,0.4930906,0.18575686,-1.0926355,-0.12781222,1.0926355,"down","DEFB126",81623,"0006952 // defense response // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0030112 // glycocalyx // inferred from electronic annotation","","chr20:123009-126392 (+) // 91.23 // p13"]
["11720104_a_at",150.88406,133.90237,122.868225,108.72014,117.92859,114.89555,0.3259282,0.15366888,0.02959919,-0.1468935,-0.02959919,-0.06719017,0.26584265,0.053556032,1.1899985,0.25095975,1.1899985,"up","PAK1",5058,"0000165 // MAPK cascade // inferred from direct assay /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016358 // dendrite development // inferred from electronic annotation /// 0031295 // T cell costimulation // traceable author statement /// 0031532 // actin cytoskeleton reorganization // inferred from direct assay /// 0031532 // actin cytoskeleton reorganization // inferred from mutant phenotype /// 0031532 // actin cytoskeleton reorganization // non-traceable author statement /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0032956 // regulation of actin cytoskeleton organization // inferred from electronic annotation /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0033148 // positive regulation of intracellular estrogen receptor signaling pathway // inferred from direct assay /// 0033554 // cellular response to stress // inferred from electronic annotation /// 0042060 // wound healing // inferred from mutant phenotype /// 0043507 // positive regulation of JUN kinase activity // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from mutant phenotype /// 0048812 // neuron projection morphogenesis // inferred from sequence or structural similarity /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051496 // positive regulation of stress fiber assembly // inferred from mutant phenotype /// 0060244 // negative regulation of cell proliferation involved in contact inhibition // inferred from mutant phenotype","0001726 // ruffle // inferred from direct assay /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0014704 // intercalated disc // inferred from sequence or structural similarity /// 0014704 // intercalated disc // inferred from electronic annotation /// 0030018 // Z disc // inferred from sequence or structural similarity /// 0030018 // Z disc // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030424 // axon // inferred from sequence or structural similarity /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0031941 // filamentous actin // non-traceable author statement /// 0031965 // nuclear membrane // inferred from sequence or structural similarity /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation","chr11:77032591-77185365 (-) // 85.0 // q13.5"]
["11731540_at",10.415561,9.384603,8.115575,9.266636,10.084044,11.305818,0.09851956,-0.05185318,-0.26145554,-0.07010317,0.05185342,0.2168448,0.6714371,0.36015102,-1.1002221,-0.1377948,1.1002221,"down","SESTD1",91404,"0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from mutant phenotype","0034704 // calcium channel complex // inferred from physical interaction","0001786 // phosphatidylserine binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005545 // 1-phosphatidylinositol binding // inferred from direct assay /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from direct assay /// 0010314 // phosphatidylinositol-5-phosphate binding // inferred from direct assay /// 0031210 // phosphatidylcholine binding // inferred from direct assay /// 0032266 // phosphatidylinositol-3-phosphate binding // inferred from direct assay /// 0043325 // phosphatidylinositol-3,4-bisphosphate binding // inferred from direct assay /// 0070273 // phosphatidylinositol-4-phosphate binding // inferred from direct assay /// 0070300 // phosphatidic acid binding // inferred from direct assay /// 0080025 // phosphatidylinositol-3,5-bisphosphate binding // inferred from direct assay","chr2:179966420-180129517 (-) // 86.67 // q31.2"]
["11725347_a_at",1840.9896,1724.0547,1632.2545,1703.1173,1449.8195,1387.5013,0.1429596,0.048283577,-0.03065586,0.03065586,-0.20164871,-0.26503277,0.40760902,0.12554821,1.1477997,0.19887094,1.1477997,"up","TFDP1",7027,"0000080 // G1 phase of mitotic cell cycle // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003713 // transcription coactivator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction","chr13:114238987-114295788 (+) // 90.18 // q34"]
["11755375_a_at",22.69797,24.10896,24.5586,19.689363,23.897255,21.284569,-0.037140846,0.049865246,0.07652426,-0.24228764,0.037140846,-0.12989616,0.4906287,0.18382046,1.1029983,0.14143051,1.1029983,"up","DGKH",160851,"0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from mutant phenotype /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0051259 // protein oligomerization // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004143 // diacylglycerol kinase activity // inferred from mutant phenotype /// 0004143 // diacylglycerol kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr13:42729424-42803386 (+) // 96.93 // q14.11"]
["11727314_a_at",699.4056,686.3965,703.1308,537.2854,581.1151,588.23376,0.13841343,0.11132622,0.14607716,-0.24202728,-0.12889194,-0.11132622,0.05885244,0.0022872312,1.2249199,0.29268742,1.2249199,"up","ABCC5",10057,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015711 // organic anion transport // traceable author statement /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // inferred from direct assay /// 0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // traceable author statement /// 0008514 // organic anion transmembrane transporter activity // traceable author statement /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation","chr3:183637721-183735803 (-) // 99.16 // q27.1"]
["11745576_at",34.869823,36.38751,39.558697,37.641094,33.77712,40.698463,-0.08589697,-0.02443266,0.09611893,0.02443266,-0.13182974,0.13709831,0.95929456,0.884454,-1.0101974,-0.014637235,1.0101974,"down","KIRREL3-AS3",283165,"","","","chr11:126872804-126875953 (+) // 93.56 // q24.2"]
["11739591_s_at",258.72284,261.87973,270.13586,374.46695,334.98236,346.0394,-0.2174778,-0.19998074,-0.1552,0.31595325,0.1552,0.20205116,0.04476294,0.0012569329,-1.3335645,-0.4152876,1.3335645,"down","MINA",84864,"0042254 // ribosome biogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay","","chr3:97660660-97691295 (-) // 99.04 // q11.2"]
["11718486_a_at",1585.414,1695.5752,1663.496,2036.9639,1898.5298,1846.5168,-0.15843105,-0.061515808,-0.08907223,0.20312977,0.101592064,0.061515808,0.124318354,0.011618413,-1.1688466,-0.2250856,1.1688466,"down","EI24",9538,"0006914 // autophagy // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","","chr11:125439111-125454579 (+) // 93.48 // q24.2"]
["11736828_x_at",381.8846,399.1959,376.38953,442.59564,442.22278,410.89685,-0.08479977,-0.020839691,-0.10571003,0.12805271,0.12683678,0.020839691,0.1650628,0.020643832,-1.119116,-0.16235952,1.119116,"down","ST3GAL1",6482,"0006464 // cellular protein modification process // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0016266 // O-glycan processing // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030173 // integral to Golgi membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0003836 // beta-galactoside (CMP) alpha-2,3-sialyltransferase activity // inferred from electronic annotation /// 0003836 // beta-galactoside (CMP) alpha-2,3-sialyltransferase activity // traceable author statement /// 0008373 // sialyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr8:134467090-134584183 (-) // 90.59 // q24.22"]
["11717923_s_at",1751.1859,1474.5482,1431.7401,1512.6019,1498.7384,1386.2535,0.23632145,-0.0117378235,-0.05424118,0.025021553,0.0117378235,-0.10081959,0.7538321,0.47415948,1.0556519,0.07813419,1.0556519,"up","YAP1",10413,"0001570 // vasculogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0008283 // cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010837 // regulation of keratinocyte proliferation // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from electronic annotation /// 0030857 // negative regulation of epithelial cell differentiation // inferred from electronic annotation /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0035329 // hippo signaling cascade // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0046622 // positive regulation of organ growth // inferred from electronic annotation /// 0060242 // contact inhibition // inferred from direct assay /// 0071480 // cellular response to gamma radiation // inferred from direct assay /// 0072091 // regulation of stem cell proliferation // inferred from electronic annotation /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0001076 // RNA polymerase II transcription factor binding transcription factor activity // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0070064 // proline-rich region binding // inferred from electronic annotation","chr11:101981209-102104149 (+) // 91.79 // q22.1"]
["11724546_at",17.37433,15.625966,18.020426,18.236656,23.490509,23.209492,-0.061279774,-0.21429181,-0.00860405,0.00860405,0.3738408,0.35647774,0.2902378,0.06364138,-1.266663,-0.34103268,1.266663,"down","HCFC2",29915,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0016032 // viral reproduction // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003713 // transcription coactivator activity // traceable author statement","chr12:104458234-104500299 (+) // 97.11 // q23.3"]
["11730716_a_at",10.716667,17.124252,16.551626,10.837042,13.868789,15.897877,-0.47048163,0.20570302,0.15663505,-0.45436692,-0.0984962,0.0984962,0.8779176,0.69234985,1.0832812,0.115407735,1.0832812,"up","PAGE5",90737,"","","","chrX:55246788-55250533 (+) // 87.59 // p11.21"]
["11730612_a_at",319.40656,295.5562,229.29842,212.05621,187.11642,200.04137,0.53455734,0.42259598,0.05638981,-0.05638981,-0.23690033,-0.14053774,0.21367058,0.03476027,1.397121,0.48245692,1.397121,"up","MBOAT7",79143,"0006644 // phospholipid metabolic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation","chr19:54681993-54693733 (-) // 82.66 // q13.42"]
["11718387_s_at",419.32596,441.4914,442.7522,507.61127,499.35516,461.75403,-0.10873985,-0.03442669,-0.030312538,0.16691208,0.14325428,0.030312538,0.18313743,0.025389718,-1.1260878,-0.17131929,1.1260878,"down","ZFYVE20",64145,"0006810 // transport // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016197 // endosomal transport // non-traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005768 // endosome // non-traceable author statement /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:15111579-15140664 (-) // 84.74 // p25.1"]
["11715842_a_at",993.5479,996.9505,1008.18176,786.74115,750.28076,775.3051,0.16835022,0.17328262,0.18944454,-0.16835022,-0.23680878,-0.18947506,0.0153656,6.005666e-5,1.2970527,0.37523714,1.2970527,"up","MAPK1",5594,"0000165 // MAPK cascade // traceable author statement /// 0000165 // MAPK cascade // inferred from electronic annotation /// 0000186 // activation of MAPKK activity // traceable author statement /// 0000187 // activation of MAPK activity // traceable author statement /// 0000189 // MAPK import into nucleus // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0006935 // chemotaxis // traceable author statement /// 0006950 // response to stress // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007265 // Ras protein signal transduction // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009636 // response to toxin // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010800 // positive regulation of peptidyl-threonine phosphorylation // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0019233 // sensory perception of pain // inferred from electronic annotation /// 0019858 // cytosine metabolic process // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032872 // regulation of stress-activated MAPK cascade // traceable author statement /// 0033598 // mammary gland epithelial cell proliferation // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0042221 // response to chemical stimulus // inferred from electronic annotation /// 0043330 // response to exogenous dsRNA // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050852 // T cell receptor signaling pathway // inferred from electronic annotation /// 0050853 // B cell receptor signaling pathway // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0051493 // regulation of cytoskeleton organization // traceable author statement /// 0060397 // JAK-STAT cascade involved in growth hormone signaling pathway // traceable author statement /// 0060716 // labyrinthine layer blood vessel development // inferred from electronic annotation /// 0070371 // ERK1 and ERK2 cascade // inferred from direct assay /// 0070371 // ERK1 and ERK2 cascade // traceable author statement /// 0072584 // caveolin-mediated endocytosis // traceable author statement /// 0090170 // regulation of Golgi inheritance // traceable author statement /// 2000641 // regulation of early endosome to late endosome transport // traceable author statement","0005625 // soluble fraction // inferred from electronic annotation /// 0005626 // insoluble fraction // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005769 // early endosome // traceable author statement /// 0005770 // late endosome // traceable author statement /// 0005794 // Golgi apparatus // traceable author statement /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005901 // caveola // traceable author statement /// 0005925 // focal adhesion // traceable author statement /// 0031143 // pseudopodium // inferred from electronic annotation /// 0032839 // dendrite cytoplasm // inferred from electronic annotation /// 0033267 // axon part // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0001784 // phosphotyrosine binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004707 // MAP kinase activity // inferred from electronic annotation /// 0004707 // MAP kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008353 // RNA polymerase II carboxy-terminal domain kinase activity // inferred from sequence or structural similarity /// 0008353 // RNA polymerase II carboxy-terminal domain kinase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019902 // phosphatase binding // inferred from physical interaction /// 0031435 // mitogen-activated protein kinase kinase kinase binding // inferred from electronic annotation","chr22:22108791-22221970 (-) // 87.22 // q11.21"]
["11722863_at",8.353014,7.5332823,8.582699,6.882317,7.7026887,8.977283,0.05846739,-0.09055114,0.09760165,-0.2209351,-0.05846739,0.16244912,0.85793716,0.6520478,1.0430611,0.06082372,1.0430611,"up","SCGB2A1",4246,"","","0005496 // steroid binding // inferred from electronic annotation /// 0005497 // androgen binding // non-traceable author statement","chr11:61976144-61981415 (+) // 94.72 // q12.3"]
["11751154_x_at",544.1419,536.27374,504.86087,515.78766,473.81616,500.69217,0.09265137,0.07163811,-0.015445709,0.015445709,-0.107004166,-0.027407646,0.43219146,0.14137766,1.0638317,0.089269914,1.0638317,"up","ALDOC",230,"0001666 // response to hypoxia // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006000 // fructose metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006096 // glycolysis // inferred from electronic annotation /// 0006096 // glycolysis // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0010243 // response to organic nitrogen // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0030388 // fructose 1,6-bisphosphate metabolic process // inferred from direct assay /// 0031100 // organ regeneration // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0051289 // protein homotetramerization // inferred from electronic annotation /// 0051290 // protein heterotetramerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred by curator /// 0030424 // axon // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004332 // fructose-bisphosphate aldolase activity // inferred from direct assay /// 0004332 // fructose-bisphosphate aldolase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from direct assay /// 0016829 // lyase activity // inferred from electronic annotation","chr17:26900134-26903912 (-) // 99.42 // q11.2"]
["11726904_a_at",785.5802,703.67896,725.0923,801.26373,691.7362,685.0828,0.13721752,-0.021623611,0.021623611,0.1657362,-0.046319008,-0.06026268,0.9170195,0.7801217,1.0182,0.026021026,1.0182,"up","COBL",23242,"0001843 // neural tube closure // inferred from electronic annotation","","0003779 // actin binding // inferred from electronic annotation","chr7:51083909-51384515 (-) // 99.51 // p12.1"]
["11753940_a_at",21.761406,23.115618,23.475468,23.30611,28.414211,27.805391,-0.104159355,-0.01706314,0.0052227974,-0.0052227974,0.2806816,0.24943352,0.3481074,0.09123641,-1.1596028,-0.21363068,1.1596028,"down","NRL",4901,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007468 // regulation of rhodopsin gene expression // traceable author statement /// 0007468 // regulation of rhodopsin gene expression // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0007601 // visual perception // traceable author statement /// 0045872 // positive regulation of rhodopsin gene expression // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046548 // retinal rod cell development // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043522 // leucine zipper domain binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr14:24549316-24584223 (-) // 91.15 // q11.2"]
["11751357_a_at",91.212845,90.792564,87.94461,124.22732,102.909386,113.958145,-0.087032795,-0.093695164,-0.13967466,0.35864115,0.087032795,0.23416281,0.13708603,0.014190119,-1.2599907,-0.33341306,1.2599907,"down","MEI1",150365,"0007126 // meiosis // inferred from electronic annotation /// 0007141 // male meiosis I // inferred from electronic annotation /// 0007276 // gamete generation // inferred from electronic annotation /// 0007286 // spermatid development // inferred from electronic annotation","","","chr22:42148507-42177849 (+) // 98.98 // q13.2"]
["11727430_s_at",8.154686,10.447719,10.915091,12.482818,11.340323,11.503981,-0.44819164,-0.09070516,-0.027568817,0.16605067,0.027568817,0.048240423,0.4024001,0.1223669,-1.2053415,-0.2694419,1.2053415,"down","C6orf162",57150,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:88046724-88052041 (+) // 91.8 // q15"]
["11721103_a_at",144.25464,165.82158,135.43732,172.56345,156.06917,184.5115,-0.15729094,0.043723106,-0.24828339,0.10121822,-0.043723106,0.19780207,0.4272679,0.13802625,-1.1532587,-0.20571615,1.1532587,"down","POLDIP3",84271,"0006417 // regulation of translation // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0035145 // exon-exon junction complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr22:42979727-43010962 (-) // 99.49 // q13.2"]
["11755049_a_at",365.04547,374.82852,384.80865,360.33585,339.77722,349.10736,0.009366989,0.04752159,0.08543205,-0.009366989,-0.094120026,-0.055038452,0.22301404,0.03807563,1.071983,0.100282,1.071983,"up","PIK3C3",5289,"0000045 // autophagic vacuole assembly // inferred from electronic annotation /// 0000910 // cytokinesis // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0007032 // endosome organization // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0036092 // phosphatidylinositol-3-phosphate biosynthetic process // inferred from mutant phenotype /// 0036092 // phosphatidylinositol-3-phosphate biosynthetic process // traceable author statement /// 0036092 // phosphatidylinositol-3-phosphate biosynthetic process // inferred from electronic annotation /// 0043201 // response to leucine // inferred from electronic annotation /// 0045022 // early endosome to late endosome transport // inferred from mutant phenotype /// 0045087 // innate immune response // traceable author statement /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation /// 0048015 // phosphatidylinositol-mediated signaling // inferred from electronic annotation /// 0050708 // regulation of protein secretion // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0005770 // late endosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0030496 // midbody // inferred from direct assay /// 0030496 // midbody // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016303 // 1-phosphatidylinositol-3-kinase activity // inferred from mutant phenotype /// 0016303 // 1-phosphatidylinositol-3-kinase activity // inferred from electronic annotation /// 0016303 // 1-phosphatidylinositol-3-kinase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0035004 // phosphatidylinositol 3-kinase activity // inferred from electronic annotation","chr18:39605275-39661443 (+) // 79.99 // q12.3"]
["11764109_at",8.857663,11.999739,8.467762,8.416375,11.580842,8.884128,-0.002151966,0.435853,-0.067097425,-0.075879335,0.38459015,0.002151966,0.97699255,0.9345506,1.0129621,0.0185802,1.0129621,"up","","","","","","chr6:163789337-163789753 (-) // 99.52 // q26"]
["11749470_a_at",18.458408,27.347254,23.891514,21.882656,25.334269,28.69545,-0.41451597,0.15260172,-0.042295933,-0.16900635,0.042295933,0.22202778,0.7983471,0.5440462,-1.0967052,-0.13317578,1.0967052,"down","TRPM8",79054,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0009266 // response to temperature stimulus // inferred from electronic annotation /// 0009409 // response to cold // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050955 // thermoception // inferred from electronic annotation /// 0051289 // protein homotetramerization // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070207 // protein homotrimerization // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr2:234826049-234925973 (+) // 96.93 // q37.1"]
["11750933_a_at",146.68651,109.19799,112.566284,214.82162,125.61045,142.7013,0.13175917,-0.29403162,-0.25020266,0.6821618,-0.09202051,0.09202051,0.5671142,0.24769954,-1.2877736,-0.36487898,1.2877736,"down","ZNF480",147657,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:52800431-52826411 (+) // 95.51 // q13.41"]
["11746026_x_at",25.673279,20.890625,18.854822,20.055801,20.80516,20.49129,0.31429148,0.016879559,-0.13104248,-0.041956425,0.010965347,-0.010965347,0.81551456,0.5735909,1.0575274,0.08069507,1.0575274,"up",-0.13104248,"MILR1",284021,"0033004 // negative regulation of mast cell activation // inferred from sequence or structural similarity /// 0043303 // mast cell degranulation // inferred from sequence or structural similarity","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from sequence or structural similarity"]
["11723087_at",82.93351,98.1265,102.27252,88.40809,102.96399,106.329285,-0.27253962,-0.029851913,0.029851913,-0.18031597,0.039573193,0.08597231,0.82451725,0.5887716,-1.0516027,-0.07258978,1.0516027,"down","GAS2L1",10634,"0001578 // microtubule bundle formation // inferred from mutant phenotype /// 0007026 // negative regulation of microtubule depolymerization // inferred from mutant phenotype /// 0007050 // cell cycle arrest // inferred from sequence or structural similarity /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0009267 // cellular response to starvation // inferred from sequence or structural similarity /// 0009267 // cellular response to starvation // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from direct assay /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0045647 // negative regulation of erythrocyte differentiation // inferred from direct assay /// 0051726 // regulation of cell cycle // inferred from direct assay /// 0097067 // cellular response to thyroid hormone stimulus // inferred from direct assay","0001725 // stress fiber // inferred from direct assay /// 0001725 // stress fiber // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation","0008017 // microtubule binding // inferred from direct assay /// 0008093 // cytoskeletal adaptor activity // inferred from direct assay /// 0046966 // thyroid hormone receptor binding // inferred from direct assay","chr22:29702346-29708776 (+) // 89.67 // q12.2"]
["11749176_a_at",342.43317,324.98682,326.09332,286.33005,298.77954,288.7325,0.13609123,0.06064987,0.065553665,-0.12205219,-0.06064987,-0.10999775,0.07484631,0.0038533085,1.1368155,0.18499818,1.1368155,"up","RIOK3",8780,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007059 // chromosome segregation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr18:21033250-21061544 (+) // 99.95 // q11.2"]
["11719577_a_at",167.70534,227.27283,222.52975,207.2271,220.71243,251.16966,-0.40215445,0.036342144,0.005915165,-0.0968709,-0.005915165,0.18057919,0.7177597,0.42201445,-1.1064181,-0.1458967,1.1064181,"down","AMT",275,"0006546 // glycine catabolic process // inferred from electronic annotation /// 0006546 // glycine catabolic process // traceable author statement /// 0032259 // methylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement","0004047 // aminomethyltransferase activity // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008483 // transaminase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr3:49454210-49460111 (-) // 94.96 // p21.31"]
["11741646_s_at",33.56498,32.674576,30.061268,24.43712,32.789097,35.991795,0.03626442,-0.002523899,-0.12278652,-0.42161798,0.002523899,0.13697577,0.89606494,0.7316911,1.0456191,0.06435744,1.0456191,"up","ATXN7L1",222255,"","","","chr7:105245220-105319653 (-) // 98.34 // q22.3"]
["11720729_at",109.47238,116.556206,126.32903,113.280426,138.3007,134.36655,-0.14853859,-0.058080196,0.058080673,-0.0992074,0.18870258,0.14706755,0.62000495,0.3000397,-1.0930557,-0.12836695,1.0930557,"down","CSDC2",27254,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006398 // histone mRNA 3'-end processing // non-traceable author statement","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation","chr22:41956766-41972670 (+) // 96.31 // q13.2"]
["11729235_s_at",225.40605,199.37561,221.3189,216.29391,213.87308,187.87979,0.06765175,-0.10938597,0.041252613,0.008119106,-0.008119583,-0.19506502,0.76449466,0.48977494,1.0459844,0.06486132,1.0459844,"up","E2F6",1876,"0000083 // regulation of transcription involved in G1/S phase of mitotic cell cycle // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0071339 // MLL1 complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // traceable author statement","chr2:11584500-11606303 (-) // 83.35 // p25.1"]
["11719930_a_at",859.2487,726.81024,681.3897,900.73895,738.08746,723.1809,0.23039055,-0.011106491,-0.10420513,0.29842377,0.011106491,-0.018328667,0.88184595,0.70039284,-1.0415323,-0.05870755,1.0415323,"down","ARGLU1",55082,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","","chr13:107194928-107220512 (-) // 94.79 // q33.3"]
["11733612_s_at",178.32816,193.57379,203.52399,203.02466,245.44829,216.69678,-0.18889284,-0.07054329,0.0017719269,-0.0017719269,0.27199173,0.092250824,0.36713865,0.10173149,-1.1540546,-0.20671153,1.1540546,"down","DOCK8",81704,"0007596 // blood coagulation // traceable author statement","0005829 // cytosol // traceable author statement","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0051020 // GTPase binding // inferred from electronic annotation","chr9:214864-465255 (+) // 98.62 // p24.3"]
["11745881_a_at",82.120125,70.61601,64.95624,73.42875,83.74025,76.70877,0.12986755,-0.08787298,-0.20840025,-0.031523228,0.15805244,0.03152275,0.6987125,0.39498228,-1.0778471,-0.10815257,1.0778471,"down","GUCA1A",2978,"0007165 // signal transduction // non-traceable author statement /// 0007601 // visual perception // inferred from electronic annotation /// 0007601 // visual perception // traceable author statement /// 0007602 // phototransduction // inferred from electronic annotation /// 0031282 // regulation of guanylate cyclase activity // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation /// 0008048 // calcium sensitive guanylate cyclase activator activity // traceable author statement /// 0008048 // calcium sensitive guanylate cyclase activator activity // inferred from electronic annotation /// 0030249 // guanylate cyclase regulator activity // inferred from electronic annotation","chr6:42123183-42147806 (+) // 92.41 // p21.1"]
["11750096_a_at",21.46877,23.150713,26.090176,21.64175,22.7105,21.720266,-0.048961163,0.059855938,0.232306,-0.037383556,0.03215885,-0.03215885,0.6489822,0.33236772,1.0669763,0.093528144,1.0669763,"up","CTNND2",1501,"0001763 // morphogenesis of a branching structure // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007158 // neuron cell-cell adhesion // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007612 // learning // inferred from electronic annotation /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005912 // adherens junction // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr5:10972992-11904092 (-) // 99.76 // p15.2"]
["11723609_a_at",7.404884,7.352054,6.868439,6.853116,6.966596,7.3679695,0.049176455,0.03884673,-0.059318304,-0.06254053,-0.03884673,0.04196644,0.81035924,0.5647565,1.02057,0.029375196,1.02057,"up","HABP2",3026,"0006508 // proteolysis // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005539 // glycosaminoglycan binding // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr10:115312736-115349367 (+) // 99.84 // q25.3"]
["11727450_a_at",69.854416,62.84314,52.81499,60.950592,63.64477,60.390842,0.17465353,0.022057533,-0.22875023,-0.022057533,0.04034376,-0.03536749,0.9893567,0.9688205,-1.003462,-0.0049859225,1.003462,"down","MORN4",118812,"","","","chr10:99374311-99393344 (-) // 79.38 // q24.2"]
["11736473_a_at",19.336098,19.287537,19.604174,17.79407,19.668608,19.863829,-0.009932041,-0.013559818,0.009932041,-0.12983227,0.0146660805,0.028914928,0.8624718,0.6608916,1.0169371,0.024230499,1.0169371,"up","TCF7",6932,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // not recorded /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // not recorded /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006955 // immune response // traceable author statement /// 0007420 // brain development // not recorded /// 0016055 // Wnt receptor signaling pathway // not recorded /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0022008 // neurogenesis // not recorded /// 0030538 // embryonic genitalia morphogenesis // inferred from electronic annotation /// 0033153 // T cell receptor V(D)J recombination // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0046632 // alpha-beta T cell differentiation // inferred from electronic annotation /// 0048557 // embryonic digestive tract morphogenesis // inferred from electronic annotation /// 0048619 // embryonic hindgut morphogenesis // inferred from electronic annotation /// 0048699 // generation of neurons // not recorded /// 0060070 // canonical Wnt receptor signaling pathway // not recorded /// 0071353 // cellular response to interleukin-4 // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // not recorded","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // not recorded /// 0043565 // sequence-specific DNA binding // not recorded /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay","chr5:133451300-133483919 (+) // 89.87 // q31.1"]
["11739863_a_at",624.7372,686.7532,677.2069,757.25696,850.7771,782.3516,-0.20703793,-0.070495605,-0.09069061,0.070495605,0.23849392,0.11752987,0.14403883,0.015691498,-1.2015648,-0.26491442,1.2015648,"down","TTF2",8458,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006353 // transcription termination, DNA-dependent // traceable author statement /// 0006353 // transcription termination, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008023 // transcription elongation factor complex // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0008094 // DNA-dependent ATPase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr1:117602948-117645489 (+) // 89.78 // p13.1"]
["11735984_at",37.36647,35.31628,37.691254,25.60606,27.262798,25.471838,0.26811075,0.18669987,0.28059626,-0.27714825,-0.18669987,-0.28473043,0.027066398,0.00032919497,1.4089904,0.49466175,1.4089904,"up","OR2B6",26212,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr6:27925018-27925960 (+) // 99.16 // p22.1"]
["11727105_s_at",12.66082,12.129292,12.615703,12.415918,12.940391,13.136994,0.002575159,-0.059300423,-0.0025749207,-0.025604725,0.034085512,0.05583954,0.5792898,0.25959265,-1.0289742,-0.041206773,1.0289742,"down","FGD5",152273,"0007010 // cytoskeleton organization // inferred from sequence or structural similarity /// 0008360 // regulation of cell shape // inferred from sequence or structural similarity /// 0030036 // actin cytoskeleton organization // inferred from sequence or structural similarity /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0043088 // regulation of Cdc42 GTPase activity // inferred from sequence or structural similarity /// 0046847 // filopodium assembly // inferred from sequence or structural similarity","0001726 // ruffle // inferred from sequence or structural similarity /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from sequence or structural similarity","0005085 // guanyl-nucleotide exchange factor activity // inferred from sequence or structural similarity /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0031267 // small GTPase binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:14860482-14976072 (+) // 98.53 // p25.1"]
["11756401_x_at",1210.2576,1238.0913,1266.7291,1339.1353,1256.5164,1283.82,-0.059954643,-0.027151108,0.005839348,0.08603287,-0.005839348,0.02517414,0.41897348,0.132465,-1.0440649,-0.062211365,1.0440649,"down","FAM49B",51571,"","","","chr8:130853718-131028697 (-) // 70.01 // q24.21"]
["11735552_at",10.834667,9.721463,9.20409,9.10066,11.041347,10.537197,0.09828663,-0.058122873,-0.1370213,-0.15332508,0.12554789,0.058122873,0.88913023,0.7166143,-1.0298263,-0.042400997,1.0298263,"down","FCRL6",343413,"","0009897 // external side of plasma membrane // inferred from direct assay /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from electronic annotation","chr1:159770301-159786047 (+) // 84.62 // q23.2"]
["11757770_s_at",1213.231,1258.0647,1266.3759,1484.2189,1526.2142,1334.0857,-0.09942436,-0.04707241,-0.03757286,0.19142532,0.23167896,0.03757286,0.18477026,0.025921771,-1.160636,-0.21491551,1.160636,"down","TOMM70A",9868,"0006626 // protein targeting to mitochondrion // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005742 // mitochondrial outer membrane translocase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008320 // protein transmembrane transporter activity // traceable author statement","chr3:100082307-100082909 (-) // 90.92 // q12.2"]
["11728073_a_at",249.72281,254.2229,257.33255,259.8898,221.79898,223.05972,-0.012883186,0.012883186,0.030423164,0.04468918,-0.18395805,-0.17578077,0.5165031,0.20399591,1.0830934,0.115157664,1.0830934,"up","ITPRIP",85450,"","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","","chr10:106071900-106093713 (-) // 98.8 // q25.1"]
["11743191_a_at",14.295809,21.027384,16.70499,15.855312,17.74402,16.263643,-0.20537257,0.35130453,0.01931429,-0.055998802,0.106368065,-0.01931429,0.9271711,0.80433667,1.0314904,0.04473046,1.0314904,"up","LOC100653217 /// NTM","100653217 /// 50863","0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0008038 // neuron recognition // traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr11:131780518-132206715 (+) // 96.55 // q25"]
["11721561_a_at",142.9649,146.05623,155.89455,149.75926,180.38953,157.5562,-0.09594679,-0.06508398,0.028963089,-0.028963089,0.23950768,0.044258118,0.5345374,0.21878114,-1.0935028,-0.12895685,1.0935028,"down","AHCYL2",23382,"0006730 // one-carbon metabolic process // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0004013 // adenosylhomocysteinase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr7:128864870-129070051 (+) // 93.63 // q32.1"]
["11740776_a_at",80.660835,94.845116,91.576546,71.74488,104.259895,100.44479,-0.2084074,0.025297642,-0.025297642,-0.37739992,0.16183662,0.108055115,0.95139676,0.8650112,-1.0235865,-0.033633042,1.0235865,"down","CCDC36",339834,"","","","chr3:49235860-49295537 (+) // 94.67 // p21.31"]
["11750796_a_at",497.08536,429.52896,407.6983,407.2754,372.74066,351.2188,0.2867403,0.07600212,0.00074863434,-0.00074863434,-0.12858105,-0.21438313,0.34456745,0.08964544,1.1775062,0.23573466,1.1775062,"up","DNER",92737,"0001764 // neuron migration // non-traceable author statement /// 0006897 // endocytosis // non-traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007220 // Notch receptor processing // inferred from electronic annotation /// 0007416 // synapse assembly // non-traceable author statement /// 0007417 // central nervous system development // inferred from expression pattern /// 0010001 // glial cell differentiation // inferred from electronic annotation /// 0048741 // skeletal muscle fiber development // inferred from electronic annotation","0005769 // early endosome // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from direct assay /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0005112 // Notch binding // inferred from electronic annotation /// 0005509 // calcium ion binding // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030276 // clathrin binding // traceable author statement","chr2:230222831-230451615 (-) // 97.71 // q36.3"]
["11756636_x_at",193.33311,146.1402,132.12003,134.26271,147.53706,162.37868,0.39687347,-0.0068626404,-0.15236616,-0.12915659,0.0068621635,0.14514685,0.888171,0.71465194,1.0508796,0.07159738,1.0508796,"up","PCED1A",64773,"","","0016787 // hydrolase activity // inferred from electronic annotation","chr20:2816005-2821314 (-) // 93.58 // p13"]
["11730313_a_at",110.762856,90.42048,98.637344,122.33629,107.067184,99.88953,0.09901285,-0.19373941,-0.068255424,0.24239159,0.050055504,-0.050055504,0.64267707,0.32539144,-1.0981876,-0.13512447,1.0981876,"down","ERMAP",114625,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","","chr1:43282758-43310655 (+) // 82.7 // p34.2"]
["11734540_at",15.536803,14.141347,14.141347,18.220474,13.4537735,13.894137,0.13576984,0,0,0.36564088,-0.07190871,-0.025443554,0.91572034,0.77723604,-1.0310919,-0.044172965,1.0310919,"down","LOC728819",728819,"","","","chr2:43902291-43903461 (-) // 83.18 // p21"]
["11715925_a_at",1914.7113,1711.7234,1946.156,1858.0079,1857.7648,1696.1403,0.04346466,-0.1182127,0.0669651,9.441376e-5,-9.441376e-5,-0.13140678,0.8317065,0.60183257,1.028975,0.041207943,1.028975,"up","TRAM1",23471,"0006412 // translation // traceable author statement /// 0006613 // cotranslational protein targeting to membrane // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004872 // receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr8:71485454-71520714 (-) // 92.64 // q13.3"]
["11745325_a_at",61.417137,63.275406,63.067116,56.819653,70.36246,76.67387,-0.04062462,0.0023784637,-0.0023784637,-0.15287638,0.15553951,0.27946854,0.73958355,0.45202765,-1.0774235,-0.10758537,1.0774235,"down","ZNF497",162968,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:58866926-58874214 (-) // 99.96 // q13.43"]
["11752744_a_at",356.0401,363.78247,344.9881,367.98016,383.6895,393.43533,-0.039312363,-0.008275986,-0.08480549,0.008275986,0.0685873,0.104774475,0.23861842,0.04328899,-1.0752537,-0.104677126,1.0752537,"down","LGMN",5641,"0001101 // response to acid // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // inferred from sequence or structural similarity /// 0008202 // steroid metabolic process // traceable author statement /// 0040015 // negative regulation of multicellular organism growth // inferred from electronic annotation /// 0042359 // vitamin D metabolic process // traceable author statement /// 0043524 // negative regulation of neuron apoptotic process // inferred from genetic interaction /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement","0005764 // lysosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from electronic annotation /// 0043202 // lysosomal lumen // traceable author statement /// 0045177 // apical part of cell // inferred from electronic annotation","0004197 // cysteine-type endopeptidase activity // inferred from electronic annotation /// 0004197 // cysteine-type endopeptidase activity // inferred from sequence or structural similarity /// 0008233 // peptidase activity // inferred from direct assay /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr14:93170472-93214972 (-) // 95.86 // q32.12"]
["11736147_s_at",453.2986,465.2475,439.80313,474.40787,457.55548,405.23575,-0.0067424774,0.030794144,-0.050346375,0.05892372,0.0067424774,-0.16844273,0.9019375,0.74335206,1.0178281,0.025493937,1.0178281,"up","LYRM2 /// ZC3H11A","57226 /// 9877","","0005739 // mitochondrion // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:90341944-90348475 (-) // 64.9 // q15"]
["11727772_a_at",31.967218,33.814358,28.154196,30.302156,29.18248,30.302156,0.077172756,0.15821552,-0.10607052,0,-0.05431795,0,0.76327574,0.4880578,1.0433419,0.061211966,1.0433419,"up","PITPNM2",57605,"0006810 // transport // inferred from electronic annotation /// 0008152 // metabolic process // non-traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005509 // calcium ion binding // non-traceable author statement /// 0008289 // lipid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:123468026-123634562 (-) // 98.54 // q24.31"]
["11747878_a_at",229.88963,239.34683,225.2198,187.05626,182.95647,205.56491,0.095477104,0.15363932,0.065870285,-0.20199156,-0.23396349,-0.06586981,0.111214995,0.009138145,1.207707,0.27227053,1.207707,"up","STX3",6809,"0006810 // transport // inferred from electronic annotation /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0006944 // cellular membrane fusion // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0031175 // neuron projection development // inferred from electronic annotation /// 0034599 // cellular response to oxidative stress // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005773 // vacuole // traceable author statement /// 0005911 // cell-cell junction // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030426 // growth cone // inferred from sequence or structural similarity /// 0030426 // growth cone // inferred from electronic annotation /// 0031201 // SNARE complex // inferred from sequence or structural similarity /// 0031201 // SNARE complex // inferred from electronic annotation /// 0042581 // specific granule // inferred from direct assay /// 0042582 // azurophil granule // inferred from direct assay /// 0043005 // neuron projection // inferred from sequence or structural similarity /// 0043005 // neuron projection // inferred from electronic annotation","0005484 // SNAP receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0050544 // arachidonic acid binding // inferred from sequence or structural similarity /// 0050544 // arachidonic acid binding // inferred from electronic annotation","chr11:59522924-59568958 (+) // 96.76 // q12.1"]
["11715826_x_at",3512,2933.6602,2908.2964,3246.0999,2752.7224,2651.3806,0.2658558,0.006263733,-0.006263733,0.15226936,-0.08557892,-0.13969421,0.7174537,0.42110866,1.0814396,0.11295311,1.0814396,"up","HMG20B",10362,"0006325 // chromatin organization // non-traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr19:3572942-3579233 (+) // 92.13 // p13.3"]
["11751973_x_at",81.73075,89.85268,89.72287,79.72287,93.88955,93.40864,-0.13563967,0.0010428429,-0.0010428429,-0.17152452,0.06444597,0.057037354,0.91175085,0.7662919,-1.0199744,-0.028532874,1.0199744,"down","PROSAPIP1",9762,"0051260 // protein homooligomerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from sequence or structural similarity /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0030165 // PDZ domain binding // inferred from electronic annotation /// 0043621 // protein self-association // inferred from electronic annotation","chr20:3143274-3154194 (-) // 95.54 // p13"]
["11720944_at",15.442735,14.3599415,16.287556,14.084004,12.76707,11.733184,0.11887479,0.013996124,0.19571638,-0.013996124,-0.15562606,-0.27745938,0.25488248,0.049154986,1.196281,0.25855625,1.196281,"up","RGS16",6004,"0007601 // visual perception // traceable author statement /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // traceable author statement /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation /// 0038032 // termination of G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // not recorded /// 0043547 // positive regulation of GTPase activity // traceable author statement","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded /// 0005886 // plasma membrane // not recorded /// 0045121 // membrane raft // inferred from electronic annotation","0005096 // GTPase activator activity // not recorded /// 0005096 // GTPase activator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // traceable author statement","chr1:182567757-182573548 (-) // 88.47 // q25.3"]
["11719697_a_at",882.9344,699.3889,656.38934,878.4882,796.2282,715.4168,0.22632313,-0.10988808,-0.20143127,0.21903992,0.07719898,-0.07719898,0.80263835,0.550497,-1.0727735,-0.10134544,1.0727735,"down","HSPB11",51668,"0006950 // response to stress // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation","0005929 // cilium // inferred from electronic annotation /// 0030992 // intraflagellar transport particle B // inferred from electronic annotation","","chr1:54387233-54411602 (-) // 73.84 // p32.3"]
["11750814_a_at",8.3311205,8.934088,9.363763,8.431632,10.647947,8.506644,-0.06544471,0.035365105,0.10313296,-0.04814315,0.28854823,-0.035365343,0.897094,0.7336393,-1.0309651,-0.04399548,1.0309651,"down","BEND2",139105,"","","","chrX:18189058-18238956 (-) // 92.07 // p22.13"]
["11760040_x_at",197.3945,282.40665,275.518,324.86115,277.74933,251.91534,-0.48688316,0.029808998,-0.005818367,0.23185825,0.005818367,-0.13502598,0.69856095,0.39482057,-1.1395897,-0.18851444,1.1395897,"down","NDUFB4",4710,"0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from direct assay /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation","0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement /// 0008137 // NADH dehydrogenase (ubiquinone) activity // inferred from electronic annotation","chr3:120315156-120320471 (+) // 99.33 // q13.33"]
["11740214_a_at",582.33563,629.37634,570.0789,639.1599,619.3604,596.83075,-0.062199593,0.0498724,-0.09288883,0.07212639,0.02672863,-0.02672863,0.6364367,0.31867173,-1.0418259,-0.059114195,1.0418259,"down","TBL1X",6907,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006508 // proteolysis // inferred from mutant phenotype /// 0007219 // Notch signaling pathway // traceable author statement /// 0007605 // sensory perception of sound // inferred from mutant phenotype /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048545 // response to steroid hormone stimulus // inferred from electronic annotation /// 0060070 // canonical Wnt receptor signaling pathway // inferred from mutant phenotype","0000118 // histone deacetylase complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005876 // spindle microtubule // inferred from direct assay /// 0017053 // transcriptional repressor complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from genetic interaction /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0042393 // histone binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation","chrX:9431105-9687780 (+) // 97.47 // p22.31"]
["11723347_a_at",500.99942,570.0714,580.3865,638.60034,616.8688,627.9758,-0.2561798,-0.06984615,-0.043974876,0.09392452,0.043974876,0.06972027,0.2515027,0.04803517,-1.142774,-0.1925401,1.142774,"down","MTERFD1",51001,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay","chr8:97251648-97273828 (-) // 88.33 // q22.1"]
["11738156_a_at",141.52538,151.30565,125.92899,138.21024,126.98598,117.38951,0.095294,0.1916995,-0.07315588,0.061097622,-0.061097145,-0.1744628,0.597626,0.27740318,1.093864,0.12943333,1.093864,"up","ZBTB26",57684,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:125680378-125693544 (-) // 95.61 // q33.2"]
["11716129_at",544.5557,480.78604,433.55603,831.4995,659.2044,617.8221,-0.09105587,-0.2707405,-0.4199171,0.5195799,0.18459034,0.09105587,0.2023202,0.031010553,-1.4395785,-0.5256465,1.4395785,"down","IGF2R",3482,"0006810 // transport // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0048009 // insulin-like growth factor receptor signaling pathway // traceable author statement","0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005641 // nuclear envelope lumen // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from direct assay /// 0030140 // trans-Golgi network transport vesicle // inferred from direct assay","0001948 // glycoprotein binding // inferred from direct assay /// 0001948 // glycoprotein binding // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005010 // insulin-like growth factor-activated receptor activity // traceable author statement /// 0005215 // transporter activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005520 // insulin-like growth factor binding // inferred from electronic annotation /// 0005537 // mannose binding // inferred from electronic annotation /// 0051219 // phosphoprotein binding // inferred from direct assay","chr6:160390130-160527581 (+) // 98.1 // q25.3"]
["11756882_a_at",69.387794,81.565056,89.50215,70.7275,72.4823,74.071754,-0.07859421,0.15467548,0.2886467,-0.05100441,-0.015646935,0.015647411,0.59231895,0.27254227,1.100819,0.13857727,1.100819,"up","RTTN",25914,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from electronic annotation","","","chr18:67671044-67863889 (-) // 97.69 // q22.2"]
["11755637_x_at",240.40749,232.31793,241.59418,217.09465,223.25629,230.23204,0.0558877,0.006505966,0.06299114,-0.09127045,-0.050893784,-0.0065054893,0.22658418,0.039147068,1.0653677,0.09135144,1.0653677,"up","ARHGEF10L",55160,"0032321 // positive regulation of Rho GTPase activity // inferred from direct assay /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035104 // positive regulation of transcription via sterol regulatory element binding // inferred from direct assay /// 0051496 // positive regulation of stress fiber assembly // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // inferred from direct assay","chr1:17941582-18024363 (+) // 89.68 // p36.13"]
["11718996_at",12.195364,17.822046,10.575884,13.405281,12.266395,12.536456,-0.024087429,0.5232425,-0.22964215,0.11238098,-0.015709162,0.015709162,0.93824977,0.82954663,1.0369723,0.052377336,1.0369723,"up","MSRB2",22921,"0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0030091 // protein repair // inferred from sequence or structural similarity /// 0030091 // protein repair // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation","0000318 // protein-methionine-R-oxide reductase activity // inferred from sequence or structural similarity /// 0000318 // protein-methionine-R-oxide reductase activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0008113 // peptide-methionine-(S)-S-oxide reductase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from sequence or structural similarity /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:23384377-23411276 (+) // 57.95 // p12.2"]
["11742377_at",17.581646,19.22845,17.775547,16.483858,17.162998,17.59062,-0.0003681183,0.1288042,0.015455723,-0.093384266,-0.0351367,0.0003681183,0.42710766,0.13791613,1.0648731,0.090681516,1.0648731,"up","OR7C2",26658,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr19:15052300-15053260 (+) // 99.69 // p13.12"]
["11736548_s_at",193.0385,196.26631,202.094,222.38623,175.68808,172.49992,-0.01196146,0.011961937,0.054175854,0.19221687,-0.1478343,-0.1742549,0.84932077,0.63494,1.0434414,0.0613496,1.0434414,"up","FANCD2",2177,"0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007129 // synapsis // inferred from electronic annotation /// 0007276 // gamete generation // inferred from electronic annotation /// 0010332 // response to gamma radiation // inferred from direct assay","0000793 // condensed chromosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr3:10068070-10141344 (+) // 93.96 // p25.3"]
["11747866_a_at",171.1013,176.6031,162.31744,204.46225,191.55457,164.95053,-0.02283001,0.02283001,-0.09886265,0.23415422,0.14007473,-0.075647354,0.56844735,0.24914095,-1.0961775,-0.13248137,1.0961775,"down","RBL2",5934,"0000080 // G1 phase of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0043550 // regulation of lipid kinase activity // inferred from direct assay /// 0051726 // regulation of cell cycle // inferred from electronic annotation","0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr16:53483880-53524532 (+) // 99.86 // q12.2"]
["11719799_a_at",1322.1093,1330.3192,1345.636,1588.433,1408.1638,1357.8867,-0.03198433,-0.02305317,-0.0065374374,0.23277855,0.058989525,0.0065374374,0.4535283,0.15606076,-1.0867049,-0.11996015,1.0867049,"down","MBD4",8930,"0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006284 // base-excision repair // inferred from electronic annotation /// 0006284 // base-excision repair // traceable author statement /// 0006285 // base-excision repair, AP site formation // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0008630 // DNA damage response, signal transduction resulting in induction of apoptosis // inferred from electronic annotation /// 0009314 // response to radiation // inferred from electronic annotation /// 0045008 // depyrimidination // traceable author statement","0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003696 // satellite DNA binding // traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004520 // endodeoxyribonuclease activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation","chr3:129149788-129159022 (-) // 86.25 // q21.3"]
["11742511_a_at",25.866608,24.428795,20.02244,28.98767,25.866608,28.358078,0,-0.08250809,-0.36947298,0.1643486,0,0.13266897,0.38487533,0.11174202,-1.1889321,-0.24966627,1.1889321,"down","IL4R",3566,"0002532 // production of molecular mediator involved in inflammatory response // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0030728 // ovulation // inferred from electronic annotation /// 0035771 // interleukin-4-mediated signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043032 // positive regulation of macrophage activation // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0045626 // negative regulation of T-helper 1 cell differentiation // inferred from electronic annotation /// 0045630 // positive regulation of T-helper 2 cell differentiation // inferred from electronic annotation /// 0090197 // positive regulation of chemokine secretion // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004896 // cytokine receptor activity // inferred from electronic annotation /// 0004913 // interleukin-4 receptor activity // traceable author statement /// 0005057 // receptor signaling protein activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043560 // insulin receptor substrate binding // inferred from reviewed computational analysis","chr16:27325250-27364017 (+) // 70.52 // p12.1"]
["11741910_s_at",6.6390862,8.045686,8.142178,7.870363,7.373033,6.6875806,-0.19835949,0.07887101,0.09607029,0.047086,-0.047086,-0.18786001,0.86408716,0.6646448,1.0387251,0.054813944,1.0387251,"up","PKNOX2",63876,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from electronic annotation","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003785 // actin monomer binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from electronic annotation","chr11:125034558-125303282 (+) // 97.22 // q24.2"]
["11759627_at",146.20035,109.025536,87.6481,107.19678,81.6222,90.060684,0.5733309,0.15005064,-0.16482067,0.12564659,-0.26758146,-0.12564659,0.6376513,0.3200714,1.2103136,0.27538085,1.2103136,"up","USP15",9958,"0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0016579 // protein deubiquitination // inferred from direct assay","","0003824 // catalytic activity // inferred from electronic annotation /// 0004197 // cysteine-type endopeptidase activity // traceable author statement /// 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0004843 // ubiquitin-specific protease activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr12:62654160-62730474 (+) // 82.6 // q14.1"]
["11718129_x_at",441.2227,380.44363,369.96042,382.2837,301.1383,309.05606,0.23398018,0.020155907,-0.020155907,0.027116776,-0.31710052,-0.27965832,0.39402232,0.11735715,1.2040323,0.2678741,1.2040323,"up","ARL2",402,"0006184 // GTP catabolic process // inferred from mutant phenotype /// 0007021 // tubulin complex assembly // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0010811 // positive regulation of cell-substrate adhesion // inferred from sequence or structural similarity /// 0015870 // acetylcholine transport // inferred from electronic annotation /// 0031113 // regulation of microtubule polymerization // inferred from mutant phenotype /// 0031116 // positive regulation of microtubule polymerization // inferred from direct assay /// 0034260 // negative regulation of GTPase activity // inferred from direct assay /// 0051297 // centrosome organization // inferred from mutant phenotype /// 0051457 // maintenance of protein location in nucleus // inferred from direct assay /// 0070830 // tight junction assembly // inferred from sequence or structural similarity","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from direct assay /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016328 // lateral plasma membrane // inferred from sequence or structural similarity","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from mutant phenotype /// 0005095 // GTPase inhibitor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from mutant phenotype /// 0005525 // GTP binding // inferred from electronic annotation /// 0019003 // GDP binding // inferred from electronic annotation","chr11:64781423-64789656 (+) // 95.24 // q13.1"]
["11734958_s_at",85.67235,106.668785,112.64657,101.255684,116.86971,90.483734,-0.27866888,0.037567616,0.11623287,-0.03756714,0.1693306,-0.19984055,0.9685549,0.9121604,-1.013208,-0.018930418,1.013208,"down","C14orf135",64430,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr14:60558544-60601530 (+) // 99.38 // q23.1"]
["11759275_at",8.871647,10.745629,11.276237,9.597032,11.69717,12.196698,-0.311244,-0.034767866,0.034767866,-0.19785762,0.087641954,0.14797306,0.75945306,0.4816865,-1.0839767,-0.116333805,1.0839767,"down","OR2M3",127062,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr1:248366331-248367393 (+) // 100.0 // q44"]
["11745871_a_at",878.8042,916.8821,996.07837,815.465,873.043,817.0563,0.0047445297,0.06593895,0.185462,-0.10317421,-0.0047445297,-0.100361824,0.2983068,0.06742174,1.113274,0.15480869,1.113274,"up","PAPOLA",10914,"0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006378 // mRNA polyadenylation // non-traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0031123 // RNA 3'-end processing // inferred from electronic annotation /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0043631 // RNA polyadenylation // inferred from sequence or structural similarity /// 0043631 // RNA polyadenylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from sequence or structural similarity /// 0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0004652 // polynucleotide adenylyltransferase activity // inferred from sequence or structural similarity /// 0004652 // polynucleotide adenylyltransferase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:96968770-97033420 (+) // 97.22 // q32.2"]
["11734814_a_at",276.10507,233.69014,264.5759,228.81192,208.24278,183.24556,0.25583792,0.015217304,0.19430208,-0.015217304,-0.15111303,-0.3356018,0.26132166,0.05180348,1.2504348,0.32242978,1.2504348,"up","PDE1A",5136,"0000042 // protein targeting to Golgi // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement","0005829 // cytosol // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004114 // 3',5'-cyclic-nucleotide phosphodiesterase activity // inferred from electronic annotation /// 0004117 // calmodulin-dependent cyclic-nucleotide phosphodiesterase activity // traceable author statement /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0008081 // phosphoric diester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:183006903-183387425 (-) // 97.1 // q32.1"]
["11722465_a_at",297.91022,247.24265,235.85483,242.4175,232.81442,200.87392,0.3171811,0.048231125,-0.019797802,0.019797802,-0.038516045,-0.2514062,0.50439,0.1944651,1.1528832,0.20524631,1.1528832,"up","C17orf80",55028,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr17:71228867-71245093 (+) // 98.03 // q25.1"]
["11719993_x_at",333.5565,308.13583,290.03348,318.55173,263.79404,261.59668,0.15803814,0.043673515,-0.043673515,0.09163475,-0.18048096,-0.19254875,0.5722937,0.25247017,1.1068637,0.14647762,1.1068637,"up","NLK",51701,"0000165 // MAPK cascade // inferred from sequence or structural similarity /// 0000165 // MAPK cascade // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from mutant phenotype /// 0007243 // intracellular protein kinase cascade // inferred from sequence or structural similarity /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018107 // peptidyl-threonine phosphorylation // inferred from sequence or structural similarity /// 0018107 // peptidyl-threonine phosphorylation // inferred from electronic annotation /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from sequence or structural similarity /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0033136 // serine phosphorylation of STAT3 protein // inferred from sequence or structural similarity /// 0033136 // serine phosphorylation of STAT3 protein // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from sequence or structural similarity /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004707 // MAP kinase activity // inferred from sequence or structural similarity /// 0004707 // MAP kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042169 // SH2 domain binding // inferred from sequence or structural similarity /// 0042169 // SH2 domain binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:26368784-26523402 (+) // 91.63 // q11.2"]
["11733607_a_at",8.060059,7.476254,7.259504,7.6928296,8.106133,7.218241,0.08787513,-0.020599365,-0.06304407,0.020599365,0.09609914,-0.071267605,0.94442207,0.84541965,-1.0095645,-0.013733113,1.0095645,"down","LRRC34",151827,"","","","chr3:169511268-169530312 (-) // 97.6 // q26.2"]
["11721035_x_at",42.556057,33.16217,35.79504,42.453335,40.931786,45.39202,0.02981472,-0.33001137,-0.21978998,0.026328087,-0.026328087,0.12288904,0.4242126,0.13601023,-1.1601343,-0.21429184,1.1601343,"down","PPP1R3B",79660,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005977 // glycogen metabolic process // inferred from electronic annotation","","","chr8:8993764-9008220 (-) // 88.24 // p23.1"]
["11742980_a_at",6.411005,6.587734,7.10899,6.6352944,6.4642496,6.259781,-0.025582075,0.013649702,0.12351203,0.024027824,-0.013649702,-0.060020447,0.6641602,0.34985584,1.0379527,0.053740647,1.0379527,"up","ANKS1B",56899,"","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0015030 // Cajal body // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0046875 // ephrin receptor binding // inferred from physical interaction","chr12:99137995-99548542 (-) // 97.01 // q23.1"]
["11717748_x_at",1643.3635,1669.3298,1633.7075,1928.7013,1885.8629,1662.5615,-0.019686699,0.0029306412,-0.028188705,0.21129131,0.17888641,-0.0029306412,0.36212853,0.09905291,-1.1050135,-0.14406398,1.1050135,"down","MCTS1",28985,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0040008 // regulation of growth // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation","chrX:119737687-119755014 (+) // 74.21 // q24"]
["11742257_a_at",10.045393,11.038705,10.9845705,9.827578,11.683618,12.120597,-0.13249063,0.003546238,-0.003546238,-0.16411686,0.08546233,0.13843608,0.81204534,0.5683245,-1.0454259,-0.064090796,1.0454259,"down","PTGER3",5733,"0001660 // fever generation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007200 // phospholipase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0008219 // cell death // traceable author statement /// 0015701 // bicarbonate transport // inferred from electronic annotation /// 0030522 // intracellular receptor mediated signaling pathway // traceable author statement /// 0031622 // positive regulation of fever generation // inferred from sequence or structural similarity /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0035810 // positive regulation of urine volume // inferred from electronic annotation","0005635 // nuclear envelope // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004955 // prostaglandin receptor activity // inferred from electronic annotation /// 0004957 // prostaglandin E receptor activity // inferred from electronic annotation /// 0004957 // prostaglandin E receptor activity // non-traceable author statement /// 0004957 // prostaglandin E receptor activity // traceable author statement","chr1:71418114-71513491 (-) // 92.12 // p31.1"]
["11752824_a_at",143.89664,120.58133,125.41713,104.329216,95.7594,91.88076,0.35945797,0.10443163,0.16115904,-0.10443163,-0.22808933,-0.28774023,0.12459899,0.01166922,1.333394,0.4151032,1.333394,"up","C17orf61-PLSCR3 /// PLSCR3","100529211 /// 57048","0017121 // phospholipid scrambling // non-traceable author statement /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0042632 // cholesterol homeostasis // inferred from electronic annotation /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0017128 // phospholipid scramblase activity // non-traceable author statement /// 0048306 // calcium-dependent protein binding // inferred from physical interaction","chr17:7293535-7307414 (-) // 97.7 // p13.1"]
["11751321_a_at",271.04953,200.60196,222.5357,178.20259,162.66547,132.1185,0.51962996,0.08540869,0.23511028,-0.08540869,-0.2170186,-0.51709366,0.22139551,0.037399113,1.4673605,0.5532234,1.4673605,"up","CRIM1",51232,"0001558 // regulation of cell growth // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0048009 // insulin-like growth factor receptor signaling pathway // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004857 // enzyme inhibitor activity // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005010 // insulin-like growth factor-activated receptor activity // traceable author statement /// 0005520 // insulin-like growth factor binding // inferred from electronic annotation","chr2:36744515-36776110 (+) // 88.26 // p22.2"]
["11756118_s_at",430.3102,382.98508,460.29913,457.44995,540.47034,439.22293,-0.058906555,-0.22699547,0.038288116,0.029330254,0.2699318,-0.029330254,0.54068846,0.22374128,-1.1270217,-0.17251526,1.1270217,"down","MLL5",55904,"0002446 // neutrophil mediated immunity // inferred from sequence or structural similarity /// 0002446 // neutrophil mediated immunity // inferred from electronic annotation /// 0006306 // DNA methylation // inferred from sequence or structural similarity /// 0006306 // DNA methylation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030218 // erythrocyte differentiation // inferred from sequence or structural similarity /// 0030218 // erythrocyte differentiation // inferred from electronic annotation /// 0030854 // positive regulation of granulocyte differentiation // inferred from mutant phenotype /// 0032259 // methylation // inferred from electronic annotation /// 0034968 // histone lysine methylation // inferred from electronic annotation /// 0042119 // neutrophil activation // inferred from sequence or structural similarity /// 0042119 // neutrophil activation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0048384 // retinoic acid receptor signaling pathway // inferred from mutant phenotype /// 0051568 // histone H3-K4 methylation // inferred from direct assay /// 0071300 // cellular response to retinoic acid // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation /// 0070688 // MLL5-L complex // inferred from direct assay","0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:104753404-104754527 (+) // 99.05 // q22.3"]
["11728751_a_at",168.67316,156.72255,160.85272,219.4181,194.92126,177.76299,-0.037861824,-0.14387989,-0.10635233,0.3415904,0.17079926,0.037861824,0.22944547,0.04003625,-1.2137308,-0.27944848,1.2137308,"down","OSBP",5007,"0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation /// 0008142 // oxysterol binding // traceable author statement /// 0008289 // lipid binding // inferred from electronic annotation","chr11:59341871-59383617 (-) // 94.22 // q12.1"]
["11715402_x_at",4353.0835,4380.3496,4426.1816,4234.7227,4598.4473,4331.4863,-0.004504204,0.00450325,0.019519806,-0.044275284,0.07460308,-0.011680603,0.997648,0.99397206,1.0002015,0.0002906214,1.0002015,"up","ILF2",3608,"0006351 // transcription, DNA-dependent // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr1:153634263-153643471 (-) // 64.49 // q21.3"]
["11760528_at",10.261318,10.152244,8.925652,7.500465,9.894317,9.525056,0.07998037,0.0645628,-0.12120628,-0.3721838,0.027436256,-0.027436256,0.7037977,0.40206018,1.0956904,0.13184017,1.0956904,"up","RDM1",201299,"0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015030 // Cajal body // inferred from electronic annotation /// 0016605 // PML body // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr17:34249158-34257770 (-) // 85.03 // q12"]
["11744420_at",134.82547,136.09557,123.568016,146.90425,143.33717,147.22287,-0.050923347,-0.03739643,-0.17671156,0.072859764,0.037396908,0.07598543,0.20168886,0.030889472,-1.109896,-0.15042442,1.109896,"down","MIR600 /// MIR600HG","693185 /// 81571","","","","chr9:125871772-125877756 (-) // 95.55 // q33.3"]
["11761323_at",16.406752,17.753923,16.182346,16.488943,17.970608,18.731087,-0.060528755,0.053319454,-0.080397606,-0.053319454,0.07082081,0.13061619,0.6325747,0.31428018,-1.0559744,-0.07857481,1.0559744,"down","COMMD9",29099,"","","","chr11:36296052-36310976 (-) // 89.17 // p13"]
["11744583_s_at",154.84004,154.55223,141.64677,147.88951,144.90334,145.7346,0.0768466,0.07416248,-0.05163479,0.010588169,-0.01884079,-0.010588646,0.7119248,0.4141112,1.02769,0.03940522,1.02769,"up","AMDHD2 /// CEMP1","51005 /// 752014","0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006044 // N-acetylglucosamine metabolic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0008448 // N-acetylglucosamine-6-phosphate deacetylase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016810 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds // inferred from electronic annotation","chr16:2570365-2579732 (+) // 99.19 // p13.3"]
["11758184_x_at",2719.255,2714.833,2771.6863,2689.8047,2811.7666,2670.5571,0.0011739731,-0.0011739731,0.028726578,-0.014535904,0.04943943,-0.024896622,0.9324228,0.81626296,1.0043346,0.006239947,1.0043346,"up","KRT8",3856,"0007010 // cytoskeleton organization // non-traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005882 // intermediate filament // non-traceable author statement /// 0005882 // intermediate filament // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0045095 // keratin filament // inferred from electronic annotation","0005198 // structural molecule activity // non-traceable author statement /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr12:53293746-53298821 (-) // 86.05 // q13.13"]
["11725061_a_at",879.7504,731.6805,736.16034,762.85895,677.6982,666.848,0.26147747,-0.0044031143,0.0044031143,0.055799484,-0.11497402,-0.13825893,0.5408908,0.22431237,1.1118562,0.15297024,1.1118562,"up","USP7",7874,"0006281 // DNA repair // inferred from electronic annotation /// 0006283 // transcription-coupled nucleotide-excision repair // inferred from mutant phenotype /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016579 // protein deubiquitination // inferred from direct assay /// 0016579 // protein deubiquitination // inferred from mutant phenotype /// 0031647 // regulation of protein stability // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation","0002039 // p53 binding // inferred from direct assay /// 0004197 // cysteine-type endopeptidase activity // traceable author statement /// 0004221 // ubiquitin thiolesterase activity // inferred from mutant phenotype /// 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0004843 // ubiquitin-specific protease activity // inferred from mutant phenotype /// 0004843 // ubiquitin-specific protease activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr16:8985953-9057341 (-) // 95.32 // p13.2"]
["11751316_x_at",73.22287,73.63074,79.84768,89.754456,73.91277,79.41281,-0.0653038,-0.057289124,0.059652805,0.22838545,-0.051774025,0.051774025,0.6613993,0.3470407,-1.0696275,-0.09710849,1.0696275,"down","EPS8L1",54869,"0016310 // phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation","chr19:55591759-55599057 (+) // 97.73 // q13.42"]
["11719866_at",145.17471,145.2083,145.88954,140.50417,143.40683,157.03003,-0.00016736984,0.000166893,0.006918907,-0.047344208,-0.017843723,0.11308336,0.92384815,0.795681,-1.0095127,-0.013659007,1.0095127,"down","SVEP1",79987,"0007155 // cell adhesion // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr9:113127527-113342160 (-) // 98.99 // q31.3"]
["11747376_s_at",349.13574,312.1991,313.05652,469.72275,473.28464,401.50015,-0.100806236,-0.26212788,-0.25817108,0.3272152,0.33811378,0.100806236,0.10442692,0.007885191,-1.3778448,-0.4624134,1.3778448,"down","CCPG1",9236,"0007049 // cell cycle // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 2001106 // regulation of Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr15:55651043-55665781 (-) // 91.73 // q21.3"]
["11740760_at",14.646056,14.263345,13.405276,14.582461,14.720605,14.931173,0.0031392574,-0.035060883,-0.124572515,-0.003139019,0.010463953,0.030954361,0.47531098,0.17234282,-1.0460302,-0.064924456,1.0460302,"down","TRPA1",8989,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0009409 // response to cold // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0048265 // response to pain // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050955 // thermoception // inferred from electronic annotation /// 0050966 // detection of mechanical stimulus involved in sensory perception of pain // inferred from electronic annotation /// 0050968 // detection of chemical stimulus involved in sensory perception of pain // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032421 // stereocilium bundle // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0015267 // channel activity // traceable author statement /// 0015267 // channel activity // inferred from electronic annotation","chr8:72933485-72987852 (-) // 95.44 // q13.3"]
["11719788_s_at",979.97144,906.83215,933.81744,699.6525,647.93036,603.542,0.29900265,0.1870985,0.2294035,-0.1870985,-0.2978983,-0.40028286,0.0496726,0.0015617278,1.4475315,0.5335947,1.4475315,"up","TUBB2A",7280,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0007017 // microtubule-based process // inferred from electronic annotation /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0051258 // protein polymerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation","chr6:3153911-3157809 (-) // 96.98 // p25.2"]
["11751189_x_at",11.981168,12.206694,13.124955,12.902904,13.615974,12.315238,-0.07330179,-0.046397924,0.05824232,0.033625603,0.111230135,-0.033625603,0.6844045,0.3769871,-1.0407059,-0.05756245,1.0407059,"down","RIMS1",22999,"0006461 // protein complex assembly // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0006944 // cellular membrane fusion // non-traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // traceable author statement /// 0007601 // visual perception // inferred from electronic annotation /// 0014047 // glutamate secretion // traceable author statement /// 0016079 // synaptic vesicle exocytosis // traceable author statement /// 0017156 // calcium ion-dependent exocytosis // traceable author statement /// 0045055 // regulated secretory pathway // non-traceable author statement /// 0046903 // secretion // non-traceable author statement /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from sequence or structural similarity /// 0042734 // presynaptic membrane // non-traceable author statement /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005083 // small GTPase regulator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:72970401-73110962 (+) // 92.33 // q13"]
["11748164_a_at",6.289903,6.484141,5.9494176,6.3561797,6.0088396,6.2798967,0.0011484623,0.045026064,-0.0791409,0.016270638,-0.064802885,-0.0011484623,0.9659573,0.9051713,1.0038693,0.005571441,1.0038693,"up","VCAN",1462,"0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0008037 // cell recognition // traceable author statement /// 0008347 // glial cell migration // inferred from direct assay /// 0009611 // response to wounding // inferred from electronic annotation /// 0031103 // axon regeneration // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity","0005509 // calcium ion binding // inferred from electronic annotation /// 0005539 // glycosaminoglycan binding // traceable author statement /// 0005540 // hyaluronic acid binding // inferred from electronic annotation /// 0005540 // hyaluronic acid binding // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr5:82767582-82876981 (+) // 99.9 // q14.2"]
["11721203_at",20.98137,16.72996,19.345522,18.767487,17.986212,19.777721,0.13899136,-0.18768358,0.021882057,-0.021882057,-0.083226204,0.05375862,0.9794347,0.9407689,1.0056859,0.008179824,1.0056859,"up","SCARF2",91179,"0007155 // cell adhesion // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr22:20778873-20792146 (-) // 91.56 // q11.21"]
["11735804_x_at",144.8802,117.65159,129.00656,151.92583,118.22112,115.006836,0.23039436,-0.06994486,0.06297827,0.2989006,-0.06297827,-0.10274601,0.9482469,0.85511976,1.0210714,0.0300838,1.0210714,"up","NAT6",24142,"","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay","0008080 // N-acetyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation","chr3:50333833-50336847 (-) // 98.23 // p21.31"]
["11719412_at",132.05624,89.85636,86.843025,138.68484,104.11836,84.53282,0.44919395,-0.10626602,-0.15547657,0.5198517,0.10626602,-0.19437504,0.9204653,0.78830177,-1.0580666,-0.08143045,1.0580666,"down","PBX1",5087,"0001655 // urogenital system development // inferred from electronic annotation /// 0001658 // branching involved in ureteric bud morphogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0007548 // sex differentiation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0009954 // proximal/distal pattern formation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030278 // regulation of ossification // inferred from electronic annotation /// 0030325 // adrenal gland development // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0035162 // embryonic hemopoiesis // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048536 // spleen development // inferred from electronic annotation /// 0048538 // thymus development // inferred from electronic annotation /// 0048568 // embryonic organ development // inferred from electronic annotation /// 0048706 // embryonic skeletal system development // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr1:164528434-164821067 (+) // 94.97 // q23.3"]
["11726441_a_at",248.47319,242.93999,273.12366,219.84146,241.06845,224.47931,0.03806877,0.005578518,0.17453289,-0.13855791,-0.0055789948,-0.10843897,0.3143507,0.07491723,1.1149033,0.15691863,1.1149033,"up","ERCC6L",54821,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chrX:71424514-71458897 (-) // 98.01 // q13.1"]
["11761498_at",31.678846,30.528183,22.478565,32.983727,31.161295,30.985304,0.027850151,-0.025527954,-0.4671197,0.08608484,0.004085541,-0.004085541,0.6320647,0.31368425,-1.135736,-0.1836275,1.135736,"down","FAM129C",199786,"","","0005543 // phospholipid binding // inferred from electronic annotation","chr19:17634109-17660620 (+) // 99.07 // p13.11"]
["11761732_at",35.87871,43.81827,43.52612,39.06887,46.90743,50.807808,-0.28357887,0.004825592,-0.004825592,-0.16068745,0.10310936,0.21834326,0.6795411,0.3698525,-1.1081204,-0.1481147,1.1081204,"down","PILRA",29992,"0007165 // signal transduction // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr7:99971150-99972732 (+) // 99.92 // q22.1"]
["11762481_at",114.61723,135.3896,156.00175,122.72292,151.1463,166.57431,-0.31970692,-0.07941437,0.12503147,-0.2211256,0.07941437,0.21963453,0.80551094,0.5559123,-1.0847313,-0.11733777,1.0847313,"down","LAMB4",22798,"0007155 // cell adhesion // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation","","chr7:107715982-107763640 (-) // 86.92 // q31.1"]
["11722116_a_at",42.284157,48.724033,52.04007,34.59907,40.059338,46.555485,-0.069417,0.13509941,0.23008871,-0.3588009,-0.14739561,0.069417,0.49013317,0.18334225,1.1844223,0.2441835,1.1844223,"up","RARB",5915,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0003417 // growth plate cartilage development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0021756 // striatum development // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from electronic annotation /// 0032331 // negative regulation of chondrocyte differentiation // inferred from electronic annotation /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043068 // positive regulation of programmed cell death // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048048 // embryonic eye morphogenesis // inferred from electronic annotation /// 0048384 // retinoic acid receptor signaling pathway // traceable author statement /// 0048384 // retinoic acid receptor signaling pathway // inferred from electronic annotation /// 0048384 // retinoic acid receptor signaling pathway // inferred from direct assay /// 0048566 // embryonic digestive tract development // inferred from mutant phenotype /// 0055012 // ventricular cardiac muscle cell differentiation // inferred from electronic annotation /// 0061037 // negative regulation of cartilage development // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0003708 // retinoic acid receptor activity // inferred from electronic annotation /// 0003708 // retinoic acid receptor activity // traceable author statement /// 0003708 // retinoic acid receptor activity // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:25469009-25639423 (+) // 95.75 // p24.2"]
["11737598_a_at",100.0555,113.45943,111.95663,118.96748,120.99089,118.0375,-0.20991087,-0.028534412,-0.047770977,0.039856434,0.06418753,0.028534412,0.31530333,0.07538786,-1.1015983,-0.13959819,1.1015983,"down","C17orf67",339210,"","0005576 // extracellular region // inferred from electronic annotation","","chr17:54869274-54911256 (-) // 82.48 // q22"]
["11728523_a_at",13.594855,16.777754,15.443664,15.631837,15.231482,16.151604,-0.19269037,0.11079836,-0.008736134,0.008736372,-0.028695107,0.055926323,0.8661631,0.6689507,-1.0296818,-0.042198576,1.0296818,"down","MYCL1",4610,"0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation","chr1:40361099-40367687 (-) // 97.97 // p34.2"]
["11728439_at",47.297848,53.224964,65.03721,49.46174,64.67722,49.413944,-0.11743355,0.05289507,0.34205723,-0.05289507,0.3340497,-0.054289818,0.97619915,0.9321184,1.0117723,0.016884612,1.0117723,"up","BRWD1",54014,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0008360 // regulation of cell shape // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","","chr21:40557818-40685556 (-) // 98.43 // q22.2"]
["11750366_a_at",5.6909027,7.3101897,6.3464026,6.3148184,6.055533,6.5837574,-0.15368271,0.20756865,0.0035989285,-0.0035989285,-0.0640862,0.056571007,0.9446615,0.8457871,1.015976,0.022866255,1.015976,"up","EPHA6",285220,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0048013 // ephrin receptor signaling pathway // inferred from electronic annotation","0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005003 // ephrin receptor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr3:97158434-97356907 (+) // 95.38 // q11.2"]
["11760384_at",77.80753,76.98092,79.449615,74.905426,90.54695,95.151505,-0.015065193,-0.030474186,0.01506567,-0.06990433,0.20369148,0.27525187,0.55788946,0.23917933,-1.1068841,-0.1465042,1.1068841,"down","PPP2R5C",5527,"0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // inferred from direct assay /// 0007165 // signal transduction // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0016485 // protein processing // inferred from direct assay /// 0042771 // DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis // inferred from mutant phenotype /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from mutant phenotype","0000159 // protein phosphatase type 2A complex // inferred from direct assay /// 0000159 // protein phosphatase type 2A complex // inferred from electronic annotation /// 0000159 // protein phosphatase type 2A complex // non-traceable author statement /// 0000775 // chromosome, centromeric region // inferred from direct assay /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from direct assay /// 0008601 // protein phosphatase type 2A regulator activity // inferred from direct assay /// 0008601 // protein phosphatase type 2A regulator activity // inferred from electronic annotation /// 0008601 // protein phosphatase type 2A regulator activity // non-traceable author statement","chr14:102276167-102349570 (+) // 99.53 // q32.31"]
["11737444_a_at",19.292944,16.892439,17.548101,21.780006,21.05216,20.72502,-0.051650047,-0.24334574,-0.18840837,0.123281,0.074244976,0.051650047,0.14508842,0.015902596,-1.1844304,-0.24419338,1.1844304,"down","GPR156",165829,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004965 // G-protein coupled GABA receptor activity // inferred from electronic annotation","chr3:119885676-120004242 (-) // 97.27 // q13.33"]
["11723152_a_at",144.71513,130.39056,134.20494,153.0674,127.40744,116.95603,0.12957716,-0.02079916,0.020798683,0.21052885,-0.054189205,-0.17767286,0.88334584,0.70344967,1.0354826,0.050303373,1.0354826,"up","GON4L",54856,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation","chr1:155719507-155823598 (-) // 96.24 // q22"]
["11750968_x_at",422.4705,373.09045,329.61615,526.8841,371.37128,376.98715,0.17183018,-0.0074949265,-0.18623352,0.49046516,-0.014158249,0.0074949265,0.72720397,0.4349385,-1.1239413,-0.16856669,1.1239413,"down","NFIC",4782,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction /// 0006260 // DNA replication // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement","chr19:3381708-3463140 (+) // 92.67 // p13.3"]
["11741727_a_at",324.9941,266.76743,281.0453,289.84796,267.715,239.6516,0.24466324,-0.04016781,0.0350523,0.079545975,-0.0350523,-0.19481182,0.6443662,0.32743528,1.0942597,0.12995522,1.0942597,"up","NEDD1",121441,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0000242 // pericentriolar material // inferred from electronic annotation /// 0000922 // spindle pole // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // inferred from electronic annotation /// 0005814 // centriole // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation","","chr12:97301243-97347461 (+) // 97.93 // q23.1"]
["11754840_s_at",14.875195,11.283559,12.612583,12.932899,14.107478,13.819437,0.15403628,-0.24465013,-0.08400869,-0.04782653,0.077587605,0.04782629,0.7889472,0.52812105,-1.0600042,-0.08407003,1.0600042,"down","LINC00470",56651,"","","","chr18:1268311-1276078 (-) // 58.43 // p11.32"]
["11757267_x_at",660.7597,586.2234,588.1432,666.8974,600.0786,563.34076,0.15346622,-0.019208908,-0.014492035,0.16680527,0.014492035,-0.07665157,0.98579675,0.95845705,1.0034995,0.0050399094,1.0034995,"up","SIRT2",22933,"0000183 // chromatin silencing at rDNA // non-traceable author statement /// 0006342 // chromatin silencing // non-traceable author statement /// 0006348 // chromatin silencing at telomere // non-traceable author statement /// 0006471 // protein ADP-ribosylation // non-traceable author statement /// 0006471 // protein ADP-ribosylation // traceable author statement /// 0006476 // protein deacetylation // inferred from direct assay /// 0006476 // protein deacetylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007096 // regulation of exit from mitosis // non-traceable author statement /// 0016458 // gene silencing // non-traceable author statement /// 0016575 // histone deacetylation // traceable author statement /// 0042325 // regulation of phosphorylation // non-traceable author statement /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0045843 // negative regulation of striated muscle tissue development // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation /// 0051775 // response to redox state // non-traceable author statement","0005677 // chromatin silencing complex // non-traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation","0003950 // NAD+ ADP-ribosyltransferase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016811 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides // inferred from electronic annotation /// 0017136 // NAD-dependent histone deacetylase activity // inferred from direct assay /// 0033558 // protein deacetylase activity // inferred from direct assay /// 0035035 // histone acetyltransferase binding // inferred from physical interaction /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0042903 // tubulin deacetylase activity // inferred from direct assay /// 0043130 // ubiquitin binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation /// 0070403 // NAD+ binding // inferred from direct assay /// 0070403 // NAD+ binding // inferred from electronic annotation","chr19:39369199-39369442 (-) // 35.79 // q13.2"]
["11730333_at",20.791481,21.984837,21.076899,22.478565,23.969343,20.942537,-0.050093174,0.030423164,-0.030423164,0.062464237,0.15510464,-0.039649487,0.60273653,0.28239965,-1.0540944,-0.07600412,1.0540944,"down","DPYSL4",10570,"0006208 // pyrimidine base catabolic process // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007411 // axon guidance // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0016787 // hydrolase activity // inferred from electronic annotation /// 0016810 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds // inferred from electronic annotation /// 0016812 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides // inferred from electronic annotation","chr10:134000403-134019280 (+) // 97.43 // q26.3"]
["11730717_x_at",11.406789,12.845348,11.669703,9.3881035,10.564874,10.064834,0.05530858,0.22666192,0.08818364,-0.22567844,-0.05530858,-0.12526083,0.17435022,0.022992557,1.1964836,0.25880063,1.1964836,"up","PAGE5",90737,"","","","chrX:55246788-55250533 (+) // 87.59 // p11.21"]
["11718361_at",166.05621,158.71474,153.34009,161.7234,146.66566,153.87871,0.08755636,0.022321224,-0.02737999,0.04941368,-0.09158325,-0.022321224,0.70543236,0.40415084,1.0345448,0.048996158,1.0345448,"up","COIL",8161,"","0001674 // female germ cell nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0015030 // Cajal body // inferred from direct assay /// 0015030 // Cajal body // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0015036 // disulfide oxidoreductase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction","chr17:55015559-55038404 (-) // 97.19 // q22"]
["11735219_at",7.4018555,6.1910872,7.343481,6.926164,6.7606106,6.5250897,0.113281965,-0.14441228,0.10185909,0.017451525,-0.017451525,-0.06860733,0.8433462,0.62440515,1.0327173,0.046445444,1.0327173,"up","COL10A1",1300,"0001501 // skeletal system development // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005581 // collagen // traceable author statement /// 0005938 // cell cortex // inferred from electronic annotation","0046872 // metal ion binding // inferred from electronic annotation","chr6:116440084-116447296 (-) // 97.71 // q22.1"]
["11718052_a_at",254.04298,230.65689,221.40164,268.7013,277.24176,232.55624,0.06374693,-0.075577736,-0.13465977,0.14467716,0.18981838,-0.06374693,0.5451457,0.2279272,-1.1012025,-0.13907978,1.1012025,"down","TBC1D23",55773,"0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0005097 // Rab GTPase activator activity // inferred from electronic annotation","chr3:99979660-100044095 (+) // 96.18 // q12.1"]
["11749907_a_at",7.208457,8.041437,6.173261,6.776758,7.089299,6.874584,0.0462327,0.2039957,-0.17742491,-0.042862415,0.022185326,-0.022185326,0.90470886,0.7486498,1.0270848,0.03855534,1.0270848,"up","TRIM63",84676,"0007165 // signal transduction // non-traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005874 // microtubule // non-traceable author statement","0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0031432 // titin binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:26378141-26394121 (-) // 100.0 // p36.11"]
["11739616_x_at",287.2586,270.9211,254.65793,292.84753,268.35284,278.1699,0.06543064,-0.019046783,-0.10835886,0.09323025,-0.032788277,0.019046783,0.76457405,0.48985678,-1.033225,-0.04715454,1.033225,"down","CD3EAP",10849,"0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0009303 // rRNA transcription // inferred from electronic annotation /// 0009303 // rRNA transcription // traceable author statement","0000120 // RNA polymerase I transcription factor complex // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005730 // nucleolus // traceable author statement /// 0005736 // DNA-directed RNA polymerase I complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay","0003899 // DNA-directed RNA polymerase activity // inferred from electronic annotation","chr19:45909386-45955388 (+) // 71.15 // q13.32"]
["11737631_a_at",6.6934342,7.91041,7.8684096,6.7855787,7.11038,7.92547,-0.16025281,0.08075309,0.07307267,-0.14052749,-0.07307267,0.083497286,0.8862543,0.71005046,1.0289874,0.041225325,1.0289874,"up","SLC26A7",115111,"0001696 // gastric acid secretion // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006820 // anion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from direct assay /// 0006821 // chloride transport // inferred from electronic annotation /// 0008272 // sulfate transport // inferred from direct assay /// 0008272 // sulfate transport // inferred from electronic annotation /// 0015701 // bicarbonate transport // inferred from sequence or structural similarity /// 0015701 // bicarbonate transport // inferred from electronic annotation /// 0019532 // oxalate transport // inferred from direct assay /// 0055085 // transmembrane transport // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from mutant phenotype /// 0016323 // basolateral plasma membrane // inferred from sequence or structural similarity /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from electronic annotation","0005253 // anion channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from direct assay /// 0005254 // chloride channel activity // inferred from electronic annotation /// 0015106 // bicarbonate transmembrane transporter activity // inferred from sequence or structural similarity /// 0015106 // bicarbonate transmembrane transporter activity // inferred from electronic annotation /// 0015116 // sulfate transmembrane transporter activity // inferred from direct assay /// 0015116 // sulfate transmembrane transporter activity // inferred from electronic annotation /// 0015301 // anion:anion antiporter activity // inferred from electronic annotation /// 0019531 // oxalate transmembrane transporter activity // inferred from direct assay","chr8:92261515-92406946 (+) // 99.4 // q21.3"]
["11723861_a_at",21.01094,24.467745,21.793652,20.371883,19.43827,19.041445,0.022280693,0.24202108,0.07504797,-0.022280693,-0.0899601,-0.11971712,0.27602398,0.05779116,1.1411084,0.19043584,1.1411084,"up","ATP8A1",10396,"0006812 // cation transport // inferred from electronic annotation /// 0015914 // phospholipid transport // inferred from electronic annotation /// 0015917 // aminophospholipid transport // non-traceable author statement /// 0034220 // ion transmembrane transport // traceable author statement /// 0045332 // phospholipid translocation // non-traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042584 // chromaffin granule membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004012 // phospholipid-translocating ATPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0015247 // aminophospholipid transporter activity // non-traceable author statement /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0019829 // cation-transporting ATPase activity // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:42410393-42659122 (-) // 99.5 // p13"]
["11733619_a_at",14.315453,15.240448,16.503332,13.7536335,14.125063,15.538773,-0.045166016,0.045166016,0.16001797,-0.10292649,-0.06448221,0.07313323,0.66273135,0.3484624,1.0605146,0.084764436,1.0605146,"up","ACVR1C",130399,"0002021 // response to dietary excess // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred by curator /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007178 // transmembrane receptor protein serine/threonine kinase signaling pathway // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019915 // lipid storage // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from direct assay /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0038092 // nodal signaling pathway // inferred from mutant phenotype /// 0042981 // regulation of apoptotic process // inferred from direct assay /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0046676 // negative regulation of insulin secretion // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0048179 // activin receptor complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004675 // transmembrane receptor protein serine/threonine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005024 // transforming growth factor beta-activated receptor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016361 // activin receptor activity, type I // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred by curator /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:158383279-158485517 (-) // 93.9 // q24.1"]
["11716864_s_at",321.0766,269.2231,258.92865,256.5794,238.4727,221.88962,0.31693745,0.06282234,0.0065746307,-0.0065746307,-0.11215544,-0.21613741,0.36499164,0.100548014,1.1813207,0.24040063,1.1813207,"up","NISCH",11188,"0006006 // glucose metabolic process // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0016601 // Rac protein signal transduction // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0032228 // regulation of synaptic transmission, GABAergic // inferred from electronic annotation /// 0048243 // norepinephrine secretion // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005178 // integrin binding // inferred from electronic annotation /// 0008227 // G-protein coupled amine receptor activity // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr3:52489518-52527084 (+) // 90.72 // p21.1"]
["200062_PM_s_at",10239.62,9465.592,9606.381,9965.222,9847.495,9884.343,0.05364132,-0.059757233,-0.038456917,0.014451981,-0.00269413,0.0026950836,0.8329995,0.60564256,-1.0137312,-0.019675218,1.0137312,"down","RPL30",6156,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation","chr8:99053953-99057752 (-) // 98.74 // q22.2"]
["11740326_x_at",103.105316,96.215675,82.540764,60.909103,66.64633,79.80262,0.34527493,0.24550056,0.024335384,-0.41411352,-0.28424597,-0.024335384,0.22940563,0.040016368,1.3621969,0.44593528,1.3621969,"up","SORBS2",8470,"","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0030018 // Z disc // non-traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005200 // structural constituent of cytoskeleton // traceable author statement /// 0008093 // cytoskeletal adaptor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008307 // structural constituent of muscle // traceable author statement","chr4:186506597-186697679 (-) // 93.63 // q35.1"]
["11725830_a_at",234.22292,224.28981,198.2465,179.89725,190.20515,136.73676,0.27045584,0.2079382,0.029869556,-0.11025286,-0.029869556,-0.50602484,0.32212067,0.07865914,1.3056821,0.38480362,1.3056821,"up","PLCL2",23228,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0004435 // phosphatidylinositol phospholipase C activity // inferred from electronic annotation /// 0004629 // phospholipase C activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008081 // phosphoric diester hydrolase activity // inferred from electronic annotation","chr3:16926451-17132090 (+) // 97.8 // p24.3"]
["11726721_x_at",801.0625,771.2236,709.05664,664.61993,725.22314,747.3247,0.121834755,0.06706905,-0.05417919,-0.14755058,-0.021655083,0.021655083,0.5850652,0.26503703,1.0673932,0.094091706,1.0673932,"up","MPG",4350,"0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006284 // base-excision repair // inferred from electronic annotation /// 0006284 // base-excision repair // traceable author statement /// 0006285 // base-excision repair, AP site formation // traceable author statement /// 0006307 // DNA dealkylation involved in DNA repair // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0045007 // depurination // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003905 // alkylbase DNA N-glycosylase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008725 // DNA-3-methyladenine glycosylase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0043916 // DNA-7-methylguanine glycosylase activity // inferred from electronic annotation /// 0052821 // DNA-7-methyladenine glycosylase activity // inferred from electronic annotation /// 0052822 // DNA-3-methylguanine glycosylase activity // inferred from electronic annotation","chr16:128168-135837 (+) // 86.65 // p13.3"]
["11743357_a_at",317.8013,345.7177,357.46756,309.50665,328.70053,304.98148,-0.024324417,0.09714508,0.14536285,-0.06247902,0.024324417,-0.08372784,0.4202577,0.13349268,1.0817411,0.11335524,1.0817411,"up","ZBTB40",9923,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0030282 // bone mineralization // non-traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:22778343-22857647 (+) // 92.76 // p36.12"]
["11758895_at",29.336021,32.362724,28.991867,33.041656,28.636963,29.044043,0.0072155,0.14887524,-0.009809494,0.17882824,-0.027579308,-0.0072155,0.997455,0.99320674,1.0005195,0.00074930576,1.0005195,"up","EIF2S2",8894,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0002176 // male germ cell proliferation // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // traceable author statement /// 0006413 // translational initiation // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005829 // cytosol // traceable author statement /// 0005850 // eukaryotic translation initiation factor 2 complex // traceable author statement","0003723 // RNA binding // traceable author statement /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:32676110-32700084 (-) // 79.39 // q11.22"]
["11753852_a_at",8.002991,9.303747,7.683938,8.413649,9.816553,9.073603,-0.12666416,0.09060836,-0.18535757,-0.05447197,0.1680131,0.054472208,0.6065397,0.28669885,-1.0941488,-0.12980889,1.0941488,"down","NNAT",4826,"0006810 // transport // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007420 // brain development // traceable author statement /// 0009249 // protein lipoylation // traceable author statement /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0032880 // regulation of protein localization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","","chr20:36149733-36151159 (+) // 98.78 // q11.23"]
["11730804_s_at",471.3199,347.08957,359.64838,566.4244,521.0631,449.55627,0.03410244,-0.40729618,-0.3560171,0.2992792,0.17885399,-0.03410244,0.33116305,0.08298687,-1.3113753,-0.3910806,1.3113753,"down","PRPF38B",55119,"0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation","","chr1:109234913-109244745 (+) // 90.54 // p13.3"]
["11736428_at",78.91953,81.253654,92.05618,57.72496,69.72895,70.72285,0.07910299,0.121153355,0.3012352,-0.37208414,-0.09952164,-0.07910299,0.2277335,0.039475985,1.2752088,0.35073352,1.2752088,"up","STYX",6815,"0006470 // protein dephosphorylation // not recorded /// 0007283 // spermatogenesis // not recorded /// 0016311 // dephosphorylation // inferred from electronic annotation","0005737 // cytoplasm // not recorded","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // not recorded /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr14:53196877-53241703 (+) // 92.63 // q22.1"]
["11734349_a_at",412.8184,405.3724,389.8701,399.2516,403.5474,393.0389,0.040489197,0.0142297745,-0.042024612,-0.0077199936,0.0077199936,-0.030345917,0.841002,0.61993134,1.009994,0.014346765,1.009994,"up","TRIM11",81559,"0009615 // response to virus // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0050768 // negative regulation of neurogenesis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:228581378-228594541 (-) // 97.53 // q42.13"]
["11744180_a_at",436.95023,297.37643,272.7244,430.41547,322.5397,314.91144,0.45525742,-0.09992123,-0.22476768,0.4335184,0.01726532,-0.01726532,0.88669825,0.71155405,-1.0725042,-0.10098325,1.0725042,"down","TCIRG1",10312,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0006968 // cellular defense response // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // traceable author statement /// 0015992 // proton transport // inferred from electronic annotation /// 0033572 // transferrin transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0000220 // vacuolar proton-transporting V-type ATPase, V0 domain // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from direct assay /// 0033177 // proton-transporting two-sector ATPase complex, proton-transporting domain // inferred from electronic annotation","0005215 // transporter activity // traceable author statement /// 0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation","chr11:67806461-67818366 (+) // 95.4 // q13.2"]
["11753358_a_at",43.0089,44.236576,44.147274,38.810284,39.22228,42.433372,0.009717941,0.050322533,0.04740715,-0.13847828,-0.12324381,-0.009717941,0.23412724,0.041569002,1.0914876,0.1262958,1.0914876,"up","ACVR1",90,"0000082 // G1/S transition of mitotic cell cycle // inferred from mutant phenotype /// 0001569 // patterning of blood vessels // inferred from electronic annotation /// 0001655 // urogenital system development // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001702 // gastrulation with mouth forming second // inferred from electronic annotation /// 0001707 // mesoderm formation // inferred from electronic annotation /// 0001755 // neural crest cell migration // inferred from electronic annotation /// 0002526 // acute inflammatory response // inferred from electronic annotation /// 0003143 // embryonic heart tube morphogenesis // inferred from mutant phenotype /// 0003183 // mitral valve morphogenesis // inferred from mutant phenotype /// 0003197 // endocardial cushion development // inferred from mutant phenotype /// 0003289 // atrial septum primum morphogenesis // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007178 // transmembrane receptor protein serine/threonine kinase signaling pathway // inferred from reviewed computational analysis /// 0007178 // transmembrane receptor protein serine/threonine kinase signaling pathway // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0007281 // germ cell development // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0007369 // gastrulation // inferred from electronic annotation /// 0007498 // mesoderm development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0009968 // negative regulation of signal transduction // inferred from mutant phenotype /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018107 // peptidyl-threonine phosphorylation // inferred from direct assay /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation /// 0030278 // regulation of ossification // inferred from mutant phenotype /// 0030501 // positive regulation of bone mineralization // inferred from mutant phenotype /// 0030509 // BMP signaling pathway // inferred from direct assay /// 0032924 // activin receptor signaling pathway // inferred from direct assay /// 0032926 // negative regulation of activin receptor signaling pathway // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0045669 // positive regulation of osteoblast differentiation // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048641 // regulation of skeletal muscle tissue development // inferred from electronic annotation /// 0051145 // smooth muscle cell differentiation // inferred from electronic annotation /// 0060037 // pharyngeal system development // inferred from electronic annotation /// 0060389 // pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0060923 // cardiac muscle cell fate commitment // inferred from mutant phenotype /// 0071385 // cellular response to glucocorticoid stimulus // inferred from electronic annotation /// 2000017 // positive regulation of determination of dorsal identity // inferred from direct assay","0005887 // integral to plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation /// 0048179 // activin receptor complex // inferred from direct assay /// 0048179 // activin receptor complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004675 // transmembrane receptor protein serine/threonine kinase activity // inferred from reviewed computational analysis /// 0004675 // transmembrane receptor protein serine/threonine kinase activity // inferred from electronic annotation /// 0004702 // receptor signaling protein serine/threonine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005024 // transforming growth factor beta-activated receptor activity // inferred from electronic annotation /// 0005025 // transforming growth factor beta receptor activity, type I // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016361 // activin receptor activity, type I // inferred from direct assay /// 0016361 // activin receptor activity, type I // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046332 // SMAD binding // inferred from direct assay /// 0046332 // SMAD binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048185 // activin binding // inferred from direct assay /// 0048185 // activin binding // inferred from electronic annotation /// 0050431 // transforming growth factor beta binding // inferred from direct assay /// 0050431 // transforming growth factor beta binding // inferred from electronic annotation","chr2:158622578-158732342 (-) // 99.9 // q24.1"]
["11754542_x_at",78.68257,72.562454,96.80871,80.19789,79.859375,76.68106,-0.010708809,-0.12752962,0.28838348,0.01681137,0.010708809,-0.047882557,0.86934596,0.6742418,1.0401819,0.056835804,1.0401819,"up","ZNF594",84622,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:5082830-5095157 (-) // 81.09 // p13.2"]
["11736640_a_at",402.6055,343.782,331.78778,423.40738,371.2716,317.9917,0.17238235,-0.055490494,-0.106723785,0.24506187,0.055490494,-0.16799545,0.9235288,0.79512656,-1.0286814,-0.04079622,1.0286814,"down","ESRP2",80004,"0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0043484 // regulation of RNA splicing // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from direct assay","chr16:68262449-68270487 (-) // 95.98 // q22.1"]
["11763281_s_at",45.062904,44.555687,41.79694,47.147385,49.500237,46.408566,-0.021225452,-0.03755617,-0.12976837,0.04401207,0.11426973,0.021225452,0.2545065,0.049025796,-1.0887598,-0.12268568,1.0887598,"down","RPL23AP7 /// RPL23AP82","118433 /// 284942","0006412 // translation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // inferred from electronic annotation","chr2:114367303-114384617 (-) // 33.97 // q13"]
["11737624_a_at",28.644705,31.161304,33.691776,33.023335,33.00889,35.015457,-0.2049017,-0.083414555,0.029226303,0.0003156662,-0.0003156662,0.0848217,0.5023046,0.1927662,-1.0827028,-0.11463722,1.0827028,"down","GAB2",9846,"0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from direct assay /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0016477 // cell migration // inferred from electronic annotation /// 0030316 // osteoclast differentiation // inferred from mutant phenotype /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0043306 // positive regulation of mast cell degranulation // inferred from sequence or structural similarity /// 0048015 // phosphatidylinositol-mediated signaling // inferred from sequence or structural similarity","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0005068 // transmembrane receptor protein tyrosine kinase adaptor activity // inferred from direct assay /// 0005070 // SH3/SH2 adaptor activity // inferred from reviewed computational analysis /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0005547 // phosphatidylinositol-3,4,5-trisphosphate binding // inferred from sequence or structural similarity /// 0043325 // phosphatidylinositol-3,4-bisphosphate binding // inferred from sequence or structural similarity","chr11:77926341-78128862 (-) // 93.28 // q14.1"]
["11719362_at",259.3996,223.60692,225.53818,276.67053,243.71945,219.05,0.14587975,-0.06833172,-0.055924892,0.23887253,0.055924892,-0.098036766,0.8574012,0.65099657,-1.0412953,-0.058379244,1.0412953,"down","FAM178A",55719,"","","","chr10:102672325-102724889 (+) // 98.28 // q24.31"]
["11730351_at",244.05617,246.58675,237.71056,234.7708,280.4062,261.35004,-0.007441044,0.007441044,-0.04544878,-0.0634017,0.19286394,0.0913291,0.6273325,0.30862173,-1.0634459,-0.088746674,1.0634459,"down","ANKRD52",283373,"","","","chr12:56631590-56652175 (-) // 98.74 // q13.3"]
["11718611_at",44.59962,56.693367,55.430412,44.17225,51.536713,53.126595,-0.23048592,0.115662575,0.08316088,-0.24437714,-0.021916866,0.021916866,0.84878105,0.63388366,1.0503753,0.070904955,1.0503753,"up","TP53INP1",94241,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006950 // response to stress // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0010508 // positive regulation of autophagy // inferred from mutant phenotype /// 0030336 // negative regulation of cell migration // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0048102 // autophagic cell death // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005776 // autophagic vacuole // inferred from direct assay /// 0005776 // autophagic vacuole // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0016605 // PML body // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0016209 // antioxidant activity // inferred from sequence or structural similarity /// 0016209 // antioxidant activity // inferred from electronic annotation","chr8:95938199-95961726 (-) // 92.51 // q22.1"]
["11739232_x_at",140.65321,114.55614,121.05613,106.365875,88.8355,86.229576,0.34959698,0.053509712,0.13313103,-0.053509712,-0.31333685,-0.35629034,0.2040633,0.03163008,1.3377342,0.41979152,1.3377342,"up","RASSF2",9770,"0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr20:4760668-4803050 (-) // 90.41 // p13"]
["AFFX-HSAC07/X00351_3_at",17524.006,16696.123,16638.896,17430.713,16176.846,16038.861,0.07229614,0.0024766922,-0.0024766922,0.06459522,-0.043105125,-0.055464745,0.75536597,0.47635692,1.0248576,0.035423525,1.0248576,"up",-0.0024766922,"ACTB /// ACTB /// LOC100505829","100505829 /// 60","0006457 // protein folding // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045214 // sarcomere organization // inferred from electronic annotation /// 0045216 // cell-cell junction organization // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0051592 // response to calcium ion // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0030016 // myofibril // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030863 // cortical cytoskeleton // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from electronic annotation /// 0035267 // NuA4 histone acetyltransferase complex // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0070688 // MLL5-L complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005200 // structural constituent of cytoskeleton // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0019894 // kinesin binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0030957 // Tat protein binding // inferred from physical interaction /// 0050998 // nitric-oxide synthase binding // inferred from physical interaction"]
["11728692_a_at",199.64221,169.98404,157.4181,170.21883,114.903336,129.55618,0.28741693,0.055399418,-0.05539894,0.05739069,-0.50957966,-0.33642197,0.43150216,0.14094232,1.2822487,0.35867614,1.2822487,"up","LOC728802 /// PDE4DIP","728802 /// 9659","0043623 // cellular protein complex assembly // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // inferred from sequence or structural similarity /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030016 // myofibril // inferred from sequence or structural similarity","0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from sequence or structural similarity","chr1:144890591-144932455 (-) // 99.45 // q21.1"]
["11742877_x_at",196.64818,205.0938,213.67644,227.72278,211.91335,223.94781,-0.113833904,-0.053167343,0.005976677,0.09782791,-0.005976677,0.073711395,0.32542697,0.080114186,-1.0783776,-0.10886244,1.0783776,"down","SGSM3",27352,"0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032483 // regulation of Rab protein signal transduction // inferred from expression pattern /// 0032486 // Rap protein signal transduction // inferred from expression pattern /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0045732 // positive regulation of protein catabolic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005921 // gap junction // inferred from electronic annotation","0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017137 // Rab GTPase binding // inferred from direct assay","chr22:40766588-40806289 (+) // 95.74 // q13.1"]
["11747293_a_at",15.758328,14.295821,15.455628,14.5127945,13.914034,17.98573,0.073385715,-0.067135334,0.04540348,-0.045403242,-0.1061883,0.26412392,0.9565706,0.8763988,-1.0141653,-0.020292792,1.0141653,"down","CD1B",910,"0006955 // immune response // inferred from electronic annotation /// 0019882 // antigen processing and presentation // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr1:158300085-158301828 (-) // 95.85 // q23.1"]
["11742860_a_at",7.107555,7.0695124,6.9385543,7.428353,7.1411686,7.4519343,-0.0034034252,-0.011146069,-0.0381217,0.06028557,0.0034034252,0.0648582,0.2678313,0.054233193,-1.0427593,-0.06040618,1.0427593,"down","GPR116",221395,"0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement","chr6:46820246-46889742 (-) // 98.41 // p12.3"]
["11745498_a_at",263.3757,249.27322,225.42526,336.2125,238.99806,238.7309,0.10975933,0.03036499,-0.11471367,0.46201038,-0.030364513,-0.031977654,0.7840826,0.5198962,-1.0903207,-0.12475255,1.0903207,"down","IRF3",3661,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006917 // induction of apoptosis // traceable author statement /// 0006974 // response to DNA damage stimulus // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0009617 // response to bacterium // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from electronic annotation /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032727 // positive regulation of interferon-alpha production // inferred from sequence or structural similarity /// 0032728 // positive regulation of interferon-beta production // inferred from sequence or structural similarity /// 0032728 // positive regulation of interferon-beta production // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0039530 // MDA-5 signaling pathway // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0043330 // response to exogenous dsRNA // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0045351 // type I interferon biosynthetic process // inferred from electronic annotation /// 0045358 // negative regulation of interferon-beta biosynthetic process // inferred from electronic annotation /// 0050689 // negative regulation of defense response to virus by host // inferred from electronic annotation /// 0050715 // positive regulation of cytokine secretion // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from sequence or structural similarity /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement /// 0071359 // cellular response to dsRNA // inferred from electronic annotation /// 0071888 // macrophage apoptotic process // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // traceable author statement","0000975 // regulatory region DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003712 // transcription cofactor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation","chr19:50162904-50169116 (-) // 94.82 // q13.33"]
["11726129_at",18.891127,20.534578,22.081774,18.724995,22.12519,21.186623,-0.1428957,-0.022549152,0.08225155,-0.15563917,0.08508539,0.022549152,0.9675698,0.90969026,-1.0081635,-0.01172956,1.0081635,"down","HBZ",3050,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0015671 // oxygen transport // traceable author statement /// 0015671 // oxygen transport // inferred from electronic annotation /// 0043249 // erythrocyte maturation // inferred from electronic annotation","0005833 // hemoglobin complex // inferred from electronic annotation /// 0005833 // hemoglobin complex // traceable author statement","0005344 // oxygen transporter activity // inferred from electronic annotation /// 0005344 // oxygen transporter activity // traceable author statement /// 0005506 // iron ion binding // inferred from electronic annotation /// 0019825 // oxygen binding // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:202683-204505 (+) // 92.67 // p13.3"]
["11730174_at",12.2898855,11.7273855,13.43028,13.256865,13.43028,13.09929,-0.10064268,-0.16823292,0.027375221,0.008625507,0.027375221,-0.008625746,0.5103081,0.19898865,-1.0640936,-0.089625046,1.0640936,"down","C4orf3",401152,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr4:120217574-120222256 (-) // 56.88 // q26"]
["11715132_x_at",135.71953,115.62413,111.286316,137.80313,94.43725,104.07415,0.25876904,0.027583122,-0.027583122,0.28074932,-0.26443148,-0.12424803,0.7996719,0.5459365,1.0884182,0.12223305,1.0884182,"up","HIST1H2BH",8345,"0006334 // nucleosome assembly // non-traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation","0000786 // nucleosome // non-traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr6:26251878-26252303 (+) // 100.0 // p22.2"]
["11736997_a_at",80.91729,75.55622,73.11479,73.22289,68.462715,72.46036,0.14521885,0.04632187,-0.001065731,0.001065731,-0.09591055,-0.014037132,0.4156437,0.13056403,1.0716143,0.09978569,1.0716143,"up","MOSPD3",64598,"0007507 // heart development // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation","chr7:100209724-100212998 (+) // 95.52 // q22.1"]
["11721214_a_at",691.4112,731.54364,740.2486,805.5304,806.71606,737.92206,-0.09619522,-0.014795303,0.0022706985,0.12419987,0.1263218,-0.0022706985,0.33580288,0.08505221,-1.0859746,-0.118990324,1.0859746,"down","TMEM106B",54664,"","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","","chr7:12250847-12276890 (+) // 91.68 // p21.3"]
["11739333_at",6.341529,7.4644604,5.983467,7.8644576,7.266655,6.5780826,-0.12464857,0.11055851,-0.20849752,0.18586802,0.07181215,-0.07181215,0.6411879,0.32396376,-1.0989699,-0.13615192,1.0989699,"down","SSTR2",6752,"0006937 // regulation of muscle contraction // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007187 // G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger // traceable author statement /// 0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007584 // response to nutrient // traceable author statement /// 0007586 // digestion // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0021549 // cerebellum development // inferred from electronic annotation /// 0030432 // peristalsis // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0038170 // somatostatin signaling pathway // traceable author statement /// 0038170 // somatostatin signaling pathway // inferred from electronic annotation /// 0042594 // response to starvation // inferred from electronic annotation /// 0071385 // cellular response to glucocorticoid stimulus // inferred from electronic annotation /// 0071392 // cellular response to estradiol stimulus // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004994 // somatostatin receptor activity // inferred from electronic annotation /// 0004994 // somatostatin receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0030165 // PDZ domain binding // inferred from physical interaction /// 0030165 // PDZ domain binding // inferred from electronic annotation","chr17:71161115-71168060 (+) // 82.39 // q25.1"]
["11741018_a_at",248.02461,197.48456,188.05872,249.40376,190.72621,180.198,0.3538623,0.025118828,-0.045437813,0.36186218,-0.025118351,-0.1070385,0.9511899,0.8642069,1.0242817,0.0346126,1.0242817,"up","FAM65A",79567,"","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation","","chr16:67562716-67580688 (+) // 98.59 // q22.1"]
["11743968_a_at",3388.2263,3243.7446,3277.0342,3229.2434,3097.0474,3192.0813,0.06610298,0.003232956,0.017962456,-0.003232956,-0.06353569,-0.019931793,0.34714013,0.09077158,1.0410213,0.057999652,1.0410213,"up","CYBA",1535,"0001938 // positive regulation of endothelial cell proliferation // inferred from electronic annotation /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0003106 // negative regulation of glomerular filtration by angiotensin // inferred from electronic annotation /// 0006801 // superoxide metabolic process // inferred from mutant phenotype /// 0006801 // superoxide metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from mutant phenotype /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0014895 // smooth muscle hypertrophy // inferred from sequence or structural similarity /// 0014895 // smooth muscle hypertrophy // inferred from electronic annotation /// 0017004 // cytochrome complex assembly // inferred from direct assay /// 0022900 // electron transport chain // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from electronic annotation /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042554 // superoxide anion generation // inferred from mutant phenotype /// 0042554 // superoxide anion generation // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0045087 // innate immune response // inferred from mutant phenotype /// 0045730 // respiratory burst // inferred from mutant phenotype /// 0050665 // hydrogen peroxide biosynthetic process // inferred from sequence or structural similarity /// 0050665 // hydrogen peroxide biosynthetic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070555 // response to interleukin-1 // inferred from electronic annotation /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from electronic annotation /// 0071310 // cellular response to organic substance // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0071356 // cellular response to tumor necrosis factor // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0071480 // cellular response to gamma radiation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030141 // secretory granule // traceable author statement /// 0030425 // dendrite // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0043020 // NADPH oxidase complex // inferred from direct assay /// 0043020 // NADPH oxidase complex // inferred from mutant phenotype /// 0043020 // NADPH oxidase complex // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0097038 // perinuclear endoplasmic reticulum // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0009055 // electron carrier activity // inferred from direct assay /// 0009055 // electron carrier activity // traceable author statement /// 0016175 // superoxide-generating NADPH oxidase activity // inferred from mutant phenotype /// 0016175 // superoxide-generating NADPH oxidase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from physical interaction /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from physical interaction","chr16:88709696-88717560 (-) // 63.95 // q24.3"]
["11736749_a_at",35.187767,32.5779,32.014526,32.62268,36.940643,41.84015,0.054599285,-0.05658102,-0.08174801,-0.054599285,0.1247344,0.30441332,0.5627602,0.24353778,-1.1116937,-0.15275939,1.1116937,"down","SLC22A9",114571,"0006810 // transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:63137154-63177710 (+) // 86.42 // q12.3"]
["11746592_s_at",48.500347,32.83393,30.94902,55.73635,29.918392,44.191757,0.34851265,-0.21429491,-0.29958868,0.54913664,-0.3484497,0.21429491,0.82551616,0.5908778,-1.1434957,-0.19345091,1.1434957,"down","LOC100288332 /// LOC100506193 /// LOC642778 /// LOC642799 /// NPIP /// NPIPL3 /// PKD1P1","100288332 /// 100506193 /// 23117 /// 339044 /// 642778 /// 642799 /// 9284","0001502 // cartilage condensation // inferred from electronic annotation /// 0001568 // blood vessel development // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from sequence or structural similarity /// 0001822 // kidney development // inferred from electronic annotation /// 0001822 // kidney development // inferred from sequence or structural similarity /// 0001892 // embryonic placenta development // inferred from electronic annotation /// 0001892 // embryonic placenta development // inferred from sequence or structural similarity /// 0006611 // protein export from nucleus // inferred from electronic annotation /// 0006611 // protein export from nucleus // inferred from sequence or structural similarity /// 0006810 // transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from sequence or structural similarity /// 0007156 // homophilic cell adhesion // traceable author statement /// 0007160 // cell-matrix adhesion // traceable author statement /// 0007161 // calcium-independent cell-matrix adhesion // traceable author statement /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007259 // JAK-STAT cascade // inferred from electronic annotation /// 0007259 // JAK-STAT cascade // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from electronic annotation /// 0007507 // heart development // inferred from expression pattern /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from sequence or structural similarity /// 0021510 // spinal cord development // inferred from expression pattern /// 0021915 // neural tube development // inferred from expression pattern /// 0031659 // positive regulation of cyclin-dependent protein kinase activity involved in G1/S // inferred from direct assay /// 0032092 // positive regulation of protein binding // inferred from electronic annotation /// 0032092 // positive regulation of protein binding // inferred from sequence or structural similarity /// 0042994 // cytoplasmic sequestering of transcription factor // inferred from electronic annotation /// 0042994 // cytoplasmic sequestering of transcription factor // inferred from sequence or structural similarity /// 0043588 // skin development // inferred from expression pattern /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048565 // digestive tract development // inferred from expression pattern /// 0048754 // branching morphogenesis of a tube // inferred from direct assay /// 0048806 // genitalia development // inferred from expression pattern /// 0050982 // detection of mechanical stimulus // inferred from electronic annotation /// 0050982 // detection of mechanical stimulus // inferred from sequence or structural similarity /// 0051028 // mRNA transport // inferred from electronic annotation /// 0051216 // cartilage development // inferred from expression pattern /// 0060428 // lung epithelium development // inferred from expression pattern /// 0060674 // placenta blood vessel development // inferred from electronic annotation /// 0060674 // placenta blood vessel development // inferred from sequence or structural similarity /// 0072164 // mesonephric tubule development // inferred from expression pattern /// 0072177 // mesonephric duct development // inferred from expression pattern /// 0072205 // metanephric collecting duct development // inferred from expression pattern /// 0072218 // metanephric ascending thin limb development // inferred from expression pattern /// 0072237 // metanephric proximal tubule development // inferred from expression pattern /// 0072287 // metanephric distal tubule morphogenesis // inferred from expression pattern","0002133 // polycystin complex // inferred from electronic annotation /// 0002133 // polycystin complex // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0005929 // cilium // inferred from electronic annotation /// 0005929 // cilium // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0031512 // motile primary cilium // inferred from electronic annotation /// 0031512 // motile primary cilium // inferred from sequence or structural similarity /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005261 // cation channel activity // inferred from electronic annotation /// 0005261 // cation channel activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0044325 // ion channel binding // inferred from physical interaction","chr16:70011367-70023987 (-) // 99.26 // q22.1"]
["11729410_a_at",7.6217012,6.4123306,7.148377,7.192603,7.469215,7.014687,0.08804822,-0.16121602,-0.004449129,0.004449129,0.058891773,-0.031686068,0.86325026,0.6623089,-1.0255686,-0.036424004,1.0255686,"down","ZNF415",55786,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:53611132-53636145 (-) // 91.41 // q13.42"]
["11721848_at",229.3648,209.22285,205.81183,267.5685,237.22292,278.43335,-0.024299622,-0.15690327,-0.18061781,0.19796467,0.024299622,0.25538826,0.19840847,0.0299392,-1.2140472,-0.2798245,1.2140472,"down","REEP2",51308,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr5:137774732-137782658 (+) // 92.04 // q31.2"]
["11761778_a_at",56.057076,43.70778,47.566032,41.429012,44.902035,42.15399,0.339561,-0.01944542,0.10259628,-0.09669399,0.01944542,-0.07166624,0.46149045,0.16160703,1.1411926,0.19054224,1.1411926,"up","WDR45",11152,"0000045 // autophagic vacuole assembly // not recorded","0005737 // cytoplasm // not recorded","0005083 // small GTPase regulator activity // inferred from electronic annotation /// 0032266 // phosphatidylinositol-3-phosphate binding // not recorded /// 0080025 // phosphatidylinositol-3,5-bisphosphate binding // not recorded","chrX:48934732-48937553 (-) // 74.25 // p11.23"]
["11731939_a_at",23.527924,22.460571,20.64118,28.901445,23.400951,23.286839,0.011332989,-0.05564642,-0.1775155,0.3081007,0.0035262108,-0.0035262108,0.5172077,0.20451446,-1.130251,-0.17664325,1.130251,"down","UCP3",7352,"0000303 // response to superoxide // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0006629 // lipid metabolic process // traceable author statement /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006839 // mitochondrial transport // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0007585 // respiratory gaseous exchange // traceable author statement /// 0009409 // response to cold // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0015992 // proton transport // traceable author statement /// 0015992 // proton transport // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0032870 // cellular response to hormone stimulus // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0048545 // response to steroid hormone stimulus // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation","0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","0005215 // transporter activity // traceable author statement /// 0017077 // oxidative phosphorylation uncoupler activity // inferred from electronic annotation","chr11:73711326-73720563 (-) // 92.25 // q13.4"]
["11743553_a_at",212.339,190.802,193.39996,201.35225,201.24022,202.83215,0.07704878,-0.07724333,-0.057732582,0.00040197372,-0.0004014969,0.010966301,0.8628181,0.6614677,-1.0160452,-0.0229646,1.0160452,"down","KIN",22944,"0006260 // DNA replication // inferred from direct assay /// 0006260 // DNA replication // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from expression pattern /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from direct assay","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from sequence or structural similarity /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:7797191-7829935 (-) // 76.66 // p14"]
["11758285_s_at",868.11224,953.97906,957.3968,932.2373,906.09155,912.3796,-0.08728409,0.048791885,0.053951263,0.01553154,-0.02550888,-0.01553154,0.92123693,0.7895773,1.0095105,0.013655941,1.0095105,"up","GTF3C1",2975,"0006351 // transcription, DNA-dependent // inferred by curator /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006383 // transcription from RNA polymerase III promoter // inferred by curator /// 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0009303 // rRNA transcription // traceable author statement /// 0009304 // tRNA transcription // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0042791 // 5S class rRNA transcription from RNA polymerase III type 1 promoter // inferred by curator /// 0042797 // tRNA transcription from RNA polymerase III promoter // inferred by curator","0000127 // transcription factor TFIIIC complex // inferred from direct assay /// 0000127 // transcription factor TFIIIC complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003677 // DNA binding // inferred by curator /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr16:27471776-27472301 (-) // 89.74 // p12.1"]
["11757037_s_at",4517.389,4335.54,4270.1387,5621.5225,5391.8496,5219.725,-0.104242325,-0.16351986,-0.18544865,0.21122837,0.15104866,0.104242325,0.04868011,0.0014615367,-1.2367696,-0.3065767,1.2367696,"down","H3F3A /// H3F3B","3020 /// 3021","0006334 // nucleosome assembly // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement","0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr17:73774152-73775853 (-) // 99.82 // q25.1"]
["11724973_a_at",6.1608486,8.138945,7.0261374,6.5591226,6.2991176,6.4167967,-0.07454896,0.3271637,0.11505365,0.015824795,-0.04252839,-0.015824795,0.6273232,0.30831927,1.0994121,0.13673224,1.0994121,"up","MYRIP",25924,"0006886 // intracellular protein transport // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from sequence or structural similarity","0001750 // photoreceptor outer segment // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from electronic annotation /// 0031045 // dense core granule // inferred from sequence or structural similarity /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // non-traceable author statement /// 0017022 // myosin binding // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:39850913-40301812 (+) // 93.45 // p22.1"]
["11730180_s_at",104.32849,116.17625,118.31318,154.7214,151.26904,118.389534,-0.18194246,-0.026760578,-0.00046539307,0.38659668,0.3540411,0.00046539307,0.3256353,0.080316685,-1.2455277,-0.31675714,1.2455277,"down","KDSR",2531,"0006665 // sphingolipid metabolic process // traceable author statement /// 0006665 // sphingolipid metabolic process // inferred from electronic annotation /// 0006666 // 3-keto-sphinganine metabolic process // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0030148 // sphingolipid biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005615 // extracellular space // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0047560 // 3-dehydrosphinganine reductase activity // inferred from direct assay /// 0047560 // 3-dehydrosphinganine reductase activity // inferred from electronic annotation","chr18:60994807-61034516 (-) // 81.73 // q21.33"]
["11724053_a_at",181.05626,125.00998,122.70333,137.69473,122.590645,123.24603,0.5446458,0.010251045,-0.016617775,0.14968109,-0.017943382,-0.010251045,0.776125,0.50678897,1.1010888,0.13893077,1.1010888,"up","FGFRL1",53834,"0001501 // skeletal system development // inferred from electronic annotation /// 0001558 // regulation of cell growth // non-traceable author statement /// 0003179 // heart valve morphogenesis // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0060412 // ventricular septum morphogenesis // inferred from electronic annotation /// 0060539 // diaphragm development // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from direct assay /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from electronic annotation /// 0008201 // heparin binding // inferred from direct assay /// 0017134 // fibroblast growth factor binding // inferred from electronic annotation","chr4:1006240-1020686 (+) // 75.49 // p16.3"]
["11741696_x_at",526.5735,485.1439,458.30652,589.0564,501.40726,498.5939,0.074710846,-0.04351139,-0.1256113,0.23648167,0.004058838,-0.004058838,0.64078724,0.3232443,-1.0794511,-0.110297866,1.0794511,"down","NSUN5P1",155400,"","","","chr7:75039645-75046065 (+) // 100.0 // q11.23 /// chr7:72418837-72425261 (-) // 98.71 // q11.23 /// chr7:72717226-72722792 (-) // 96.34 // q11.23"]
["11751535_s_at",19.019348,15.785908,17.4502,15.327184,16.572226,17.287966,0.16820002,-0.10063052,0.04397583,-0.14317536,-0.030500412,0.030500412,0.7108481,0.41223288,1.0606192,0.08490682,1.0606192,"up","CA3",761,"0006730 // one-carbon metabolic process // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0004089 // carbonate dehydratase activity // inferred from electronic annotation /// 0004089 // carbonate dehydratase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016151 // nickel cation binding // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:86351086-86360746 (+) // 99.91 // q21.2"]
["11716209_a_at",490.90842,455.62985,410.56317,603.64777,515.8732,513.0279,-0.031791687,-0.13938332,-0.28964138,0.26646137,0.03977108,0.031791687,0.29946306,0.06805743,-1.2027028,-0.26628014,1.2027028,"down","VPS28",51160,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral reproduction // traceable author statement /// 0016044 // cellular membrane organization // traceable author statement /// 0016197 // endosomal transport // traceable author statement /// 0031397 // negative regulation of protein ubiquitination // inferred from direct assay /// 0046788 // egress of virus within host cell // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr8:145649000-145653895 (-) // 69.48 // q24.3"]
["11734043_at",8.850609,11.05306,12.2797365,9.0658,9.459457,9.405647,-0.09186578,0.22873163,0.3805654,-0.05720806,0.0041151047,-0.0041148663,0.5639816,0.24466728,1.1419871,0.19154634,1.1419871,"up","KIAA0408 /// SOGA3","387104 /// 9729","","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr6:127761734-127840792 (-) // 96.66 // q22.33"]
["11762934_at",7.6335163,8.981008,9.345571,7.84573,7.4955654,8.522398,-0.09923577,0.13529372,0.19269896,-0.059675932,-0.12554622,0.059675932,0.63894135,0.3214283,1.0853053,0.11810098,1.0853053,"up","CD300LG",146894,"","0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0032585 // multivesicular body membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr17:41924523-41935518 (+) // 75.83 // q21.31"]
["11737888_a_at",7.947504,9.268934,8.434058,7.2027793,8.42948,9.808864,-0.085333586,0.13656807,0.00039172173,-0.22728157,-0.0003914833,0.21825075,0.962677,0.89440507,1.0142051,0.020349432,1.0142051,"up","HRH4",59340,"0006954 // inflammatory response // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004969 // histamine receptor activity // non-traceable author statement /// 0004969 // histamine receptor activity // inferred from electronic annotation","chr18:22040592-22059920 (+) // 59.72 // q11.2"]
["11718294_s_at",8422.069,7506.885,7326.1597,8450.164,7752.7896,7443.655,0.14270973,-0.02325058,-0.058405876,0.14751434,0.02325058,-0.035452843,0.91629064,0.7782911,-1.0173055,-0.02475298,1.0173055,"down","NME1-NME2 /// NME2","4831 /// 654364","0002762 // negative regulation of myeloid leukocyte differentiation // inferred from electronic annotation /// 0006165 // nucleoside diphosphate phosphorylation // inferred from direct assay /// 0006165 // nucleoside diphosphate phosphorylation // inferred from electronic annotation /// 0006183 // GTP biosynthetic process // inferred from electronic annotation /// 0006228 // UTP biosynthetic process // inferred from electronic annotation /// 0006241 // CTP biosynthetic process // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0009117 // nucleotide metabolic process // inferred from electronic annotation /// 0009142 // nucleoside triphosphate biosynthetic process // inferred from direct assay /// 0015949 // nucleobase-containing small molecule interconversion // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030879 // mammary gland development // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043388 // positive regulation of DNA binding // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0045618 // positive regulation of keratinocyte differentiation // inferred from mutant phenotype /// 0045682 // regulation of epidermis development // inferred from mutant phenotype /// 0050679 // positive regulation of epithelial cell proliferation // inferred from mutant phenotype /// 0051591 // response to cAMP // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement","0001726 // ruffle // inferred from direct assay /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005813 // centrosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005882 // intermediate filament // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0004536 // deoxyribonuclease activity // inferred from direct assay /// 0004550 // nucleoside diphosphate kinase activity // inferred from electronic annotation /// 0004550 // nucleoside diphosphate kinase activity // inferred from direct assay /// 0004673 // protein histidine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0043015 // gamma-tubulin binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:49230925-49249104 (+) // 72.48 // q21.33"]
["11743861_a_at",579.8289,486.8221,509.09454,567.9597,520.1546,527.879,0.14605331,-0.10617924,-0.04164028,0.11621475,-0.010633469,0.010633469,0.8660484,0.66841507,-1.0276344,-0.039327066,1.0276344,"down","NIPSNAP3A",25934,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr9:107509870-107522400 (+) // 96.54 // q31.1"]
["11715832_s_at",2963.8574,2861.17,2836.898,2941.9368,2818.9836,2629.2688,0.057016373,0.0061454773,-0.0061454773,0.04630661,-0.015284538,-0.115798,0.7074617,0.4068986,1.0333035,0.047264062,1.0333035,"up","SURF4",6836,"0007030 // Golgi organization // inferred from mutant phenotype /// 0010638 // positive regulation of organelle organization // inferred from mutant phenotype /// 0032527 // protein exit from endoplasmic reticulum // inferred from mutant phenotype /// 0034498 // early endosome to Golgi transport // inferred from mutant phenotype","0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr9:136228335-136243000 (-) // 95.94 // q34.2"]
["11730835_a_at",466.16458,455.29355,467.49335,467.1091,495.01038,463.0565,-0.0014600754,-0.035502434,0.0026464462,0.0014600754,0.0851593,-0.011111259,0.6409778,0.32355785,-1.0256995,-0.03660812,1.0256995,"down","MTX2",10651,"0006626 // protein targeting to mitochondrion // inferred from electronic annotation /// 0006626 // protein targeting to mitochondrion // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006839 // mitochondrial transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","","chr2:177134143-177202751 (+) // 97.76 // q31.1"]
["11723092_at",106.451096,105.03487,106.052185,86.64308,85.27154,74.5926,0.15817833,0.13885641,0.15276194,-0.13885593,-0.1618762,-0.354908,0.08991102,0.0058459905,1.290991,0.3684789,1.290991,"up","FNIP2",57600,"0001932 // regulation of protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0008630 // DNA damage response, signal transduction resulting in induction of apoptosis // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr4:159690165-159828201 (+) // 97.59 // q32.1"]
["11725177_at",73.171555,79.547806,75.45365,53.779655,64.75442,77.10503,-0.022154331,0.09838486,0.022154331,-0.4663763,-0.1984582,0.05338812,0.5110006,0.19956902,1.1782212,0.23661044,1.1782212,"up","KCTD11",147040,"0007049 // cell cycle // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0040008 // regulation of growth // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","","chr17:7255207-7258263 (+) // 94.51 // p13.1"]
["11762768_at",6.4510636,9.322262,8.653873,8.011196,7.049765,7.863922,-0.29909635,0.2320466,0.12471247,0.013384342,-0.17105818,-0.013384342,0.8719312,0.6805898,1.054267,0.07624035,1.054267,"up","ZNF215",7762,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:6953416-6977013 (+) // 62.35 // p15.4"]
["11743965_s_at",132.01648,87.26622,77.47595,100.95419,61.84765,56.709167,0.68306017,0.085837364,-0.085837364,0.29604292,-0.4108677,-0.53600407,0.5905722,0.27096137,1.3609648,0.44462973,1.3609648,"up","CERCAM /// LOC100506065","100506065 /// 51148","0006928 // cellular component movement // traceable author statement /// 0007155 // cell adhesion // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007159 // leukocyte cell-cell adhesion // traceable author statement /// 0009103 // lipopolysaccharide biosynthetic process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation /// 0005886 // plasma membrane // non-traceable author statement","","chr9:131182759-131199628 (+) // 92.03 // q34.11"]
["11741324_s_at",27.558788,22.405155,12.858034,27.314453,21.89635,18.010715,0.31525183,0.016570091,-0.7845905,0.30240393,-0.016570091,-0.29840517,0.8874773,0.71294636,-1.1070592,-0.14673242,1.1070592,"down","TRIM51 /// TRIM51EP /// TRIM51GP /// TRIM51HP","120824 /// 399940 /// 440041 /// 84767","","0005622 // intracellular // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:55650772-55659282 (+) // 98.6 // q11 /// chr11:89586007-89596233 (+) // 95.63 // q14.3 /// chr11:89714612-89724840 (-) // 95.51 // q14.3 /// chr11:55059364-55067885 (-) // 95.33 // q11"]
["11735795_at",104.999466,92.889565,85.290794,104.55622,103.08961,112.964485,0.016293526,-0.16050053,-0.28362703,0.01019001,-0.01019001,0.121780396,0.4144124,0.12963933,-1.1354033,-0.1832048,1.1354033,"down","GPSM1",26086,"0007165 // signal transduction // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0001965 // G-protein alpha-subunit binding // inferred from electronic annotation /// 0005092 // GDP-dissociation inhibitor activity // inferred from electronic annotation /// 0030695 // GTPase regulator activity // inferred from electronic annotation","chr9:139221931-139236801 (+) // 86.97 // q34.3"]
["11741004_a_at",16.031088,17.37433,16.384842,15.359488,17.736012,19.939579,-0.07378721,0.04229784,-0.04229784,-0.13552952,0.07202196,0.24097538,0.77456653,0.50420916,-1.0597703,-0.08375166,1.0597703,"down","ALS2CR8",79800,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation","0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation","chr2:203776940-203851060 (+) // 91.59 // q33.2"]
["11763798_a_at",10.294643,10.340893,8.921877,10.0808325,10.279921,10.459474,0.0010323524,0.007499218,-0.20544243,-0.029246807,-0.0010323524,0.02394867,0.71993124,0.4250502,-1.0450172,-0.06352674,1.0450172,"down","STMN4",81551,"0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","","chr8:27096856-27115921 (-) // 99.84 // p21.2"]
["11731992_x_at",1170.0197,1063.3905,965.5837,876.84576,826.4657,769.3665,0.34659863,0.20873737,0.06953907,-0.06953907,-0.15490723,-0.2581911,0.15775812,0.018883763,1.2916102,0.36917078,1.2916102,"up","TROAP",10024,"0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr12:49716970-49718160 (+) // 76.39 // q13.12"]
["11732719_at",8.136036,8.426919,9.388667,7.3801813,8.7649145,7.4382524,-0.025339842,0.025339842,0.18125463,-0.16600943,0.082074404,-0.15470195,0.5611297,0.24194735,1.1018776,0.13996394,1.1018776,"up","EREG",2069,"0001525 // angiogenesis // inferred from electronic annotation /// 0001550 // ovarian cumulus expansion // inferred from sequence or structural similarity /// 0001550 // ovarian cumulus expansion // inferred from electronic annotation /// 0001556 // oocyte maturation // inferred from sequence or structural similarity /// 0001556 // oocyte maturation // inferred from electronic annotation /// 0001819 // positive regulation of cytokine production // inferred from sequence or structural similarity /// 0001819 // positive regulation of cytokine production // inferred from electronic annotation /// 0007143 // female meiosis // inferred from sequence or structural similarity /// 0007143 // female meiosis // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from electronic annotation /// 0007267 // cell-cell signaling // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from sequence or structural similarity /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009299 // mRNA transcription // inferred from direct assay /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0009887 // organ morphogenesis // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // traceable author statement /// 0030728 // ovulation // inferred from sequence or structural similarity /// 0030728 // ovulation // inferred from electronic annotation /// 0042060 // wound healing // traceable author statement /// 0042108 // positive regulation of cytokine biosynthetic process // inferred from direct assay /// 0042327 // positive regulation of phosphorylation // inferred from direct assay /// 0042327 // positive regulation of phosphorylation // inferred from sequence or structural similarity /// 0042327 // positive regulation of phosphorylation // inferred from electronic annotation /// 0042700 // luteinizing hormone signaling pathway // inferred from sequence or structural similarity /// 0042700 // luteinizing hormone signaling pathway // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0043616 // keratinocyte proliferation // inferred from direct assay /// 0045089 // positive regulation of innate immune response // inferred from sequence or structural similarity /// 0045089 // positive regulation of innate immune response // inferred from electronic annotation /// 0045410 // positive regulation of interleukin-6 biosynthetic process // inferred from sequence or structural similarity /// 0045410 // positive regulation of interleukin-6 biosynthetic process // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from direct assay /// 0045740 // positive regulation of DNA replication // inferred from sequence or structural similarity /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0045741 // positive regulation of epidermal growth factor-activated receptor activity // inferred from sequence or structural similarity /// 0045741 // positive regulation of epidermal growth factor-activated receptor activity // inferred from electronic annotation /// 0045840 // positive regulation of mitosis // inferred from sequence or structural similarity /// 0045840 // positive regulation of mitosis // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0048146 // positive regulation of fibroblast proliferation // inferred from direct assay /// 0048160 // primary follicle stage // inferred from sequence or structural similarity /// 0048160 // primary follicle stage // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from sequence or structural similarity /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050680 // negative regulation of epithelial cell proliferation // traceable author statement /// 0051151 // negative regulation of smooth muscle cell differentiation // inferred from direct assay /// 0051781 // positive regulation of cell division // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005154 // epidermal growth factor receptor binding // inferred from sequence or structural similarity /// 0005154 // epidermal growth factor receptor binding // traceable author statement /// 0005154 // epidermal growth factor receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation","chr4:75230859-75254477 (+) // 83.41 // q13.3"]
["11740723_x_at",52.369232,49.880375,54.176163,63.66985,61.986874,66.313484,-0.14609098,-0.21633816,-0.09715223,0.13580036,0.09715223,0.19449139,0.063843556,0.00270579,-1.2274592,-0.29567507,1.2274592,"down","LGALS9B /// LGALS9C","284194 /// 654346","","","0030246 // carbohydrate binding // inferred from electronic annotation","chr17:18380101-18398173 (+) // 94.88 // p11.2 /// chr17:20352793-20370848 (-) // 95.06 // p11.2"]
["11751552_at",155.45,170.90121,173.51874,128.48851,164.76776,185.8693,-0.11034775,0.026364326,0.048293114,-0.3851595,-0.026364326,0.14749002,0.8655458,0.66760665,1.0541751,0.07611457,1.0541751,"up","RNF223",401934,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:1007125-1009687 (-) // 95.1 // p36.33"]
["11734940_a_at",41.96213,40.77843,46.308758,57.97785,63.961872,59.91254,-0.30430555,-0.34558725,-0.16210842,0.16210842,0.3038187,0.20946455,0.05609359,0.0020361536,-1.4101001,-0.49579757,1.4101001,"down","SLC16A9",220963,"0006810 // transport // inferred from electronic annotation /// 0046415 // urate metabolic process // inferred from mutant phenotype /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0015293 // symporter activity // inferred from electronic annotation","chr10:61410522-61469837 (-) // 91.24 // q21.2"]
["11755071_a_at",46.920174,37.818188,44.648617,28.097973,32.658466,31.737263,0.41693974,0.105811596,0.34534693,-0.32280254,-0.105811596,-0.14709091,0.13591604,0.013953189,1.3959699,0.48126778,1.3959699,"up","HMCN1",83872,"0007596 // blood coagulation // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031012 // extracellular matrix // traceable author statement","0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation","chr1:186097341-186160079 (+) // 96.21 // q31.1"]
["11759789_x_at",6.9981956,7.47812,8.357772,8.581226,7.854611,8.788879,-0.21134615,-0.115653515,0.044789076,0.08285475,-0.044789314,0.1173501,0.4838868,0.17856643,-1.1064018,-0.14587541,1.1064018,"down","NLGN4Y",22829,"0007155 // cell adhesion // inferred from electronic annotation /// 0007416 // synapse assembly // not recorded","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // not recorded /// 0009986 // cell surface // not recorded /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // not recorded /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004091 // carboxylesterase activity // not recorded /// 0004872 // receptor activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0042043 // neurexin family protein binding // not recorded","chrY:16734097-16845419 (+) // 80.05 // q11.221"]
["11750395_a_at",27.494547,22.566965,23.034653,35.852432,29.488256,28.976828,-0.037877083,-0.32281017,-0.2932167,0.34504843,0.06311798,0.037877083,0.26128483,0.051775604,-1.2893547,-0.36664918,1.2893547,"down","GLI2",2736,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0001501 // skeletal system development // inferred from electronic annotation /// 0001501 // skeletal system development // inferred from sequence or structural similarity /// 0001649 // osteoblast differentiation // inferred from direct assay /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001822 // kidney development // inferred from sequence or structural similarity /// 0002009 // morphogenesis of an epithelium // inferred from electronic annotation /// 0002076 // osteoblast development // inferred from electronic annotation /// 0002076 // osteoblast development // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007224 // smoothened signaling pathway // inferred from direct assay /// 0007224 // smoothened signaling pathway // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from sequence or structural similarity /// 0007389 // pattern specification process // inferred from electronic annotation /// 0007411 // axon guidance // inferred from electronic annotation /// 0007411 // axon guidance // inferred from sequence or structural similarity /// 0007418 // ventral midline development // inferred from sequence or structural similarity /// 0007418 // ventral midline development // inferred from electronic annotation /// 0007442 // hindgut morphogenesis // inferred from electronic annotation /// 0007442 // hindgut morphogenesis // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from electronic annotation /// 0007507 // heart development // inferred from sequence or structural similarity /// 0008283 // cell proliferation // inferred from direct assay /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008589 // regulation of smoothened signaling pathway // inferred from electronic annotation /// 0009913 // epidermal cell differentiation // inferred from direct assay /// 0009953 // dorsal/ventral pattern formation // inferred from electronic annotation /// 0009954 // proximal/distal pattern formation // inferred from sequence or structural similarity /// 0021508 // floor plate formation // inferred from electronic annotation /// 0021508 // floor plate formation // inferred from sequence or structural similarity /// 0021513 // spinal cord dorsal/ventral patterning // inferred from sequence or structural similarity /// 0021513 // spinal cord dorsal/ventral patterning // inferred from electronic annotation /// 0021517 // ventral spinal cord development // inferred from sequence or structural similarity /// 0021517 // ventral spinal cord development // inferred from electronic annotation /// 0021696 // cerebellar cortex morphogenesis // inferred from electronic annotation /// 0021696 // cerebellar cortex morphogenesis // inferred from sequence or structural similarity /// 0021775 // smoothened signaling pathway involved in ventral spinal cord interneuron specification // inferred from electronic annotation /// 0021775 // smoothened signaling pathway involved in ventral spinal cord interneuron specification // inferred from sequence or structural similarity /// 0021776 // smoothened signaling pathway involved in spinal cord motor neuron cell fate specification // inferred from electronic annotation /// 0021904 // dorsal/ventral neural tube patterning // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0021938 // smoothened signaling pathway involved in regulation of cerebellar granule cell precursor cell proliferation // inferred from electronic annotation /// 0021965 // spinal cord ventral commissure morphogenesis // inferred from electronic annotation /// 0021965 // spinal cord ventral commissure morphogenesis // inferred from sequence or structural similarity /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030324 // lung development // inferred from sequence or structural similarity /// 0030879 // mammary gland development // inferred from sequence or structural similarity /// 0030879 // mammary gland development // inferred from electronic annotation /// 0030902 // hindbrain development // inferred from sequence or structural similarity /// 0030902 // hindbrain development // inferred from electronic annotation /// 0032331 // negative regulation of chondrocyte differentiation // inferred from electronic annotation /// 0033089 // positive regulation of T cell differentiation in thymus // inferred from sequence or structural similarity /// 0035295 // tube development // inferred from sequence or structural similarity /// 0035295 // tube development // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from sequence or structural similarity /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048566 // embryonic digestive tract development // inferred from electronic annotation /// 0048566 // embryonic digestive tract development // inferred from sequence or structural similarity /// 0048589 // developmental growth // inferred from electronic annotation /// 0048589 // developmental growth // inferred from sequence or structural similarity /// 0048646 // anatomical structure formation involved in morphogenesis // inferred from electronic annotation /// 0048666 // neuron development // inferred from sequence or structural similarity /// 0048666 // neuron development // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from sequence or structural similarity /// 0048856 // anatomical structure development // inferred from electronic annotation /// 0060032 // notochord regression // inferred from electronic annotation /// 0060322 // head development // inferred from electronic annotation /// 0060513 // prostatic bud formation // inferred from electronic annotation /// 0060603 // mammary gland duct morphogenesis // inferred from electronic annotation /// 0060831 // smoothened signaling pathway involved in dorsal/ventral neural tube patterning // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0090103 // cochlea morphogenesis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0031512 // motile primary cilium // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:121554871-121748562 (+) // 99.96 // q14.2"]
["11738202_x_at",748.6419,691.29834,607.9977,550.5558,498.02634,515.1491,0.37179852,0.25683117,0.071588516,-0.071588516,-0.21625519,-0.16748714,0.14849779,0.016655082,1.3060255,0.38518307,1.3060255,"up","DAXX",1616,"0000281 // cytokinesis after mitosis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from sequence or structural similarity /// 0007257 // activation of JUN kinase activity // traceable author statement /// 0008625 // induction of apoptosis via death domain receptors // traceable author statement /// 0030521 // androgen receptor signaling pathway // inferred from direct assay /// 0031396 // regulation of protein ubiquitination // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from mutant phenotype /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005938 // cell cortex // inferred from electronic annotation /// 0016605 // PML body // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation /// 0016605 // PML body // traceable author statement /// 0043005 // neuron projection // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation","0002039 // p53 binding // inferred from physical interaction /// 0005057 // receptor signaling protein activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from direct assay /// 0019899 // enzyme binding // inferred from physical interaction /// 0031072 // heat shock protein binding // traceable author statement /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0050681 // androgen receptor binding // inferred from physical interaction","chr6:33286335-33290793 (-) // 94.47 // p21.32"]
["11721048_s_at",136.48192,120.672745,118.51364,137.08682,133.4716,126.1196,0.07304716,-0.10456276,-0.13060951,0.079426765,0.040870667,-0.04087019,0.6494224,0.3328561,-1.0573972,-0.08051747,1.0573972,"down","N6AMT2",221143,"0032259 // methylation // inferred from electronic annotation","","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr13:21302638-21348057 (-) // 88.65 // q12.11"]
["11725050_a_at",133.76126,138.57094,145.55336,165.55472,158.70409,153.88904,-0.16205883,-0.11109495,-0.040171146,0.1455884,0.08462,0.040171623,0.13662899,0.014093019,-1.1443816,-0.19456826,1.1443816,"down","FAIM2",23017,"0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // non-traceable author statement /// 0007417 // central nervous system development // inferred from electronic annotation /// 0021549 // cerebellum development // inferred from sequence or structural similarity /// 0021549 // cerebellum development // inferred from electronic annotation /// 0021680 // cerebellar Purkinje cell layer development // inferred from sequence or structural similarity /// 0021680 // cerebellar Purkinje cell layer development // inferred from electronic annotation /// 0021681 // cerebellar granular layer development // inferred from sequence or structural similarity /// 0021681 // cerebellar granular layer development // inferred from electronic annotation /// 0021702 // cerebellar Purkinje cell differentiation // inferred from sequence or structural similarity /// 0021702 // cerebellar Purkinje cell differentiation // inferred from electronic annotation /// 0043523 // regulation of neuron apoptotic process // inferred from mutant phenotype /// 0043523 // regulation of neuron apoptotic process // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay /// 0045121 // membrane raft // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","","chr12:50260679-50298000 (-) // 94.11 // q13.12"]
["11754927_x_at",23.216282,22.287159,18.27426,17.633057,19.369246,20.503395,0.22032166,0.16139746,-0.12500238,-0.17653275,-0.041047573,0.041047573,0.62771934,0.30919993,1.1052835,0.14441645,1.1052835,"up","PRKACB",5567,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006629 // lipid metabolic process // traceable author statement /// 0006833 // water transport // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007243 // intracellular protein kinase cascade // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019433 // triglyceride catabolic process // traceable author statement /// 0034199 // activation of protein kinase A activity // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0071377 // cellular response to glucagon stimulus // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005952 // cAMP-dependent protein kinase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004691 // cAMP-dependent protein kinase activity // inferred from direct assay /// 0004691 // cAMP-dependent protein kinase activity // inferred from electronic annotation /// 0004691 // cAMP-dependent protein kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from direct assay","chr1:84630322-84670977 (+) // 93.82 // p31.1"]
["11733355_x_at",30.952814,19.972044,27.604898,26.481974,21.96567,20.362627,0.35994005,-0.2721486,0.1947937,0.13488007,-0.13488007,-0.2442069,0.75133365,0.4699669,1.129432,0.17559737,1.129432,"up","C5AR1",728,"0000187 // activation of MAPK activity // traceable author statement /// 0006935 // chemotaxis // traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0006968 // cellular defense response // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007204 // elevation of cytosolic calcium ion concentration // traceable author statement /// 0007606 // sensory perception of chemical stimulus // traceable author statement /// 0030593 // neutrophil chemotaxis // inferred from electronic annotation /// 0032494 // response to peptidoglycan // inferred from electronic annotation /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004942 // anaphylatoxin receptor activity // inferred from electronic annotation /// 0004944 // C5a anaphylatoxin receptor activity // inferred from electronic annotation /// 0004944 // C5a anaphylatoxin receptor activity // traceable author statement","chr19:47813074-47825323 (+) // 71.91 // q13.32"]
["11721523_s_at",1050.0084,998.0675,1009.2146,1102.6156,1083.1716,1104.6313,-0.02243042,-0.09562206,-0.07959843,0.048098564,0.02243042,0.050733566,0.1231252,0.01139148,-1.0764673,-0.10630446,1.0764673,"down","ZNF706",51123,"","0005622 // intracellular // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:102209271-102217960 (-) // 97.31 // q22.3"]
["11743114_at",2896.3286,2918.079,2899.083,3401.5881,2825.9785,3002.0298,-0.006082535,0.004711151,-0.004711151,0.2259016,-0.041557312,0.045630455,0.6830291,0.37465996,-1.0560555,-0.078685716,1.0560555,"down","DHX15",1665,"0006397 // mRNA processing // inferred from electronic annotation /// 0006397 // mRNA processing // traceable author statement /// 0008380 // RNA splicing // inferred by curator /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005689 // U12-type spliceosomal complex // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003724 // RNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr4:24529097-24586226 (-) // 96.31 // p15.2"]
["11722186_a_at",410.42178,377.5263,342.76382,312.36734,281.01184,319.8585,0.30978298,0.18925285,0.04989052,-0.084080696,-0.23669338,-0.04989052,0.20403516,0.03159432,1.2367297,0.30653027,1.2367297,"up","AKT1",207,"0000060 // protein import into nucleus, translocation // inferred from mutant phenotype /// 0001893 // maternal placenta development // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0005978 // glycogen biosynthetic process // inferred from electronic annotation /// 0005979 // regulation of glycogen biosynthetic process // inferred from mutant phenotype /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006412 // translation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006464 // cellular protein modification process // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // inferred from mutant phenotype /// 0006469 // negative regulation of protein kinase activity // inferred from sequence or structural similarity /// 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0006809 // nitric oxide biosynthetic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006924 // activation-induced cell death of T cells // inferred from mutant phenotype /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007281 // germ cell development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from mutant phenotype /// 0008286 // insulin receptor signaling pathway // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0008637 // apoptotic mitochondrial changes // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0009408 // response to heat // traceable author statement /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010748 // negative regulation of plasma membrane long-chain fatty acid transport // inferred from mutant phenotype /// 0010765 // positive regulation of sodium ion transport // inferred from electronic annotation /// 0010907 // positive regulation of glucose metabolic process // inferred from mutant phenotype /// 0010975 // regulation of neuron projection development // inferred from sequence or structural similarity /// 0010975 // regulation of neuron projection development // inferred from electronic annotation /// 0015758 // glucose transport // inferred from electronic annotation /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0018105 // peptidyl-serine phosphorylation // inferred from electronic annotation /// 0030030 // cell projection organization // inferred from electronic annotation /// 0030154 // cell differentiation // traceable author statement /// 0030163 // protein catabolic process // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030307 // positive regulation of cell growth // inferred from direct assay /// 0030307 // positive regulation of cell growth // inferred from electronic annotation /// 0030334 // regulation of cell migration // inferred from mutant phenotype /// 0030334 // regulation of cell migration // traceable author statement /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0031018 // endocrine pancreas development // traceable author statement /// 0031295 // T cell costimulation // traceable author statement /// 0031659 // positive regulation of cyclin-dependent protein kinase activity involved in G1/S // inferred from direct assay /// 0031999 // negative regulation of fatty acid beta-oxidation // inferred from mutant phenotype /// 0032094 // response to food // inferred from electronic annotation /// 0032270 // positive regulation of cellular protein metabolic process // inferred from sequence or structural similarity /// 0032270 // positive regulation of cellular protein metabolic process // inferred from electronic annotation /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from mutant phenotype /// 0032869 // cellular response to insulin stimulus // inferred from sequence or structural similarity /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0032880 // regulation of protein localization // inferred from electronic annotation /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0034405 // response to fluid shear stress // inferred from mutant phenotype /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0042640 // anagen // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // non-traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from sequence or structural similarity /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0043536 // positive regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from mutant phenotype /// 0045600 // positive regulation of fat cell differentiation // inferred from mutant phenotype /// 0045725 // positive regulation of glycogen biosynthetic process // inferred from mutant phenotype /// 0045725 // positive regulation of glycogen biosynthetic process // non-traceable author statement /// 0045768 // positive regulation of anti-apoptosis // inferred from sequence or structural similarity /// 0045768 // positive regulation of anti-apoptosis // inferred from electronic annotation /// 0045792 // negative regulation of cell size // inferred from electronic annotation /// 0045884 // regulation of survival gene product expression // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046209 // nitric oxide metabolic process // traceable author statement /// 0046326 // positive regulation of glucose import // inferred from mutant phenotype /// 0046329 // negative regulation of JNK cascade // inferred from electronic annotation /// 0046777 // protein autophosphorylation // traceable author statement /// 0046889 // positive regulation of lipid biosynthetic process // inferred from mutant phenotype /// 0048009 // insulin-like growth factor receptor signaling pathway // inferred from mutant phenotype /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0050999 // regulation of nitric-oxide synthase activity // traceable author statement /// 0051000 // positive regulation of nitric-oxide synthase activity // inferred from mutant phenotype /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051146 // striated muscle cell differentiation // inferred from electronic annotation /// 0060644 // mammary gland epithelial cell differentiation // traceable author statement /// 0060709 // glycogen cell differentiation involved in embryonic placenta development // inferred from electronic annotation /// 0060716 // labyrinthine layer blood vessel development // inferred from electronic annotation /// 0070141 // response to UV-A // inferred from direct assay /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0071364 // cellular response to epidermal growth factor stimulus // inferred from electronic annotation /// 0090004 // positive regulation of establishment of protein localization in plasma membrane // inferred from mutant phenotype /// 0090201 // negative regulation of release of cytochrome c from mitochondria // inferred from sequence or structural similarity /// 0090201 // negative regulation of release of cytochrome c from mitochondria // inferred from electronic annotation /// 2001047 // regulation of G1/S transition checkpoint // traceable author statement","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005080 // protein kinase C binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred by curator /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0005547 // phosphatidylinositol-3,4,5-trisphosphate binding // inferred from direct assay /// 0016301 // kinase activity // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from sequence or structural similarity /// 0019899 // enzyme binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0030235 // nitric-oxide synthase regulator activity // inferred from mutant phenotype /// 0042802 // identical protein binding // inferred from physical interaction /// 0043325 // phosphatidylinositol-3,4-bisphosphate binding // inferred from direct assay","chr14:105235685-105261441 (-) // 94.1 // q32.33"]
["11720622_a_at",634.9567,479.262,451.96686,685.9878,500.7468,475.97595,0.37421036,-0.031633377,-0.116230965,0.48573494,0.031633377,-0.04155922,0.8948778,0.7291308,-1.0593317,-0.083154336,1.0593317,"down","CDK16",5127,"0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // non-traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004693 // cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chrX:47078075-47089396 (+) // 93.74 // p11.23"]
["11737847_a_at",151.0053,141.08836,137.79953,162.263,149.80461,148.53516,0.01765585,-0.0803442,-0.11437225,0.12139082,0.0061383247,-0.0061388016,0.45104143,0.15425535,-1.0713899,-0.09948362,1.0713899,"down","MR1",3140,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042612 // MHC class I protein complex // inferred from electronic annotation","0032393 // MHC class I receptor activity // traceable author statement","chr1:181003104-181024633 (+) // 99.92 // q25.3"]
["11738346_at",12.851519,13.515805,16.47363,11.796362,13.7251,12.851519,-0.036354065,0.036354303,0.32186556,-0.15995121,0.058523655,-0.036354065,0.6118445,0.29182822,1.1120455,0.15321586,1.1120455,"up","ZNF713",349075,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:55980330-56008433 (+) // 75.8 // p11.2"]
["11723580_at",504.27017,536.73376,583.2344,418.14294,543.05634,484.1149,-0.045004845,0.045004845,0.16487408,-0.31520557,0.06190014,-0.10385227,0.55459285,0.2360402,1.1281904,0.17401056,1.1281904,"up","C6orf228",221710,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr6:11094033-11138971 (+) // 76.8 // p24.2"]
["11728834_x_at",95.651726,96.92727,101.10178,129.5082,128.00795,127.288994,-0.24609518,-0.22698355,-0.16614914,0.19108534,0.1742754,0.16614914,0.018439455,0.00010143993,-1.3106167,-0.39024585,1.3106167,"down","C4orf32",132720,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr4:113066522-113110237 (+) // 91.55 // q25"]
["11735867_a_at",39.594013,50.471992,46.55064,36.758865,47.67426,54.150814,-0.25072336,0.09947729,-0.017204762,-0.3579135,0.017204762,0.20097733,0.9873872,0.9630142,-1.0066576,-0.009573055,1.0066576,"down","C5orf46",389336,"","0005576 // extracellular region // inferred from electronic annotation","","chr5:147272271-147286101 (-) // 87.39 // q32"]
["11763325_a_at",183.89136,223.6829,228.55464,183.9311,252.72278,228.38956,-0.29762268,-0.015020847,0.01606226,-0.29731035,0.1610794,0.0150203705,0.9030749,0.7454596,-1.0413513,-0.058456868,1.0413513,"down","FER",2241,"0000226 // microtubule cytoskeleton organization // inferred from mutant phenotype /// 0000278 // mitotic cell cycle // inferred from mutant phenotype /// 0001932 // regulation of protein phosphorylation // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0010591 // regulation of lamellipodium assembly // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from mutant phenotype /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0030838 // positive regulation of actin filament polymerization // inferred from mutant phenotype /// 0031532 // actin cytoskeleton reorganization // inferred from sequence or structural similarity /// 0032496 // response to lipopolysaccharide // inferred from sequence or structural similarity /// 0032869 // cellular response to insulin stimulus // inferred from sequence or structural similarity /// 0033007 // negative regulation of mast cell activation involved in immune response // inferred from sequence or structural similarity /// 0033007 // negative regulation of mast cell activation involved in immune response // inferred from electronic annotation /// 0034446 // substrate adhesion-dependent cell spreading // inferred from sequence or structural similarity /// 0034614 // cellular response to reactive oxygen species // inferred from sequence or structural similarity /// 0035426 // extracellular matrix-cell signaling // inferred from sequence or structural similarity /// 0035556 // intracellular signal transduction // traceable author statement /// 0036006 // cellular response to macrophage colony-stimulating factor stimulus // inferred from mutant phenotype /// 0036119 // response to platelet-derived growth factor stimulus // inferred from sequence or structural similarity /// 0038028 // insulin receptor signaling pathway via phosphatidylinositol 3-kinase cascade // inferred from sequence or structural similarity /// 0038095 // Fc-epsilon receptor signaling pathway // inferred from sequence or structural similarity /// 0038109 // Kit signaling pathway // inferred from sequence or structural similarity /// 0042058 // regulation of epidermal growth factor receptor signaling pathway // inferred from mutant phenotype /// 0042503 // tyrosine phosphorylation of Stat3 protein // inferred from direct assay /// 0044331 // cell-cell adhesion mediated by cadherin // inferred from sequence or structural similarity /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0048008 // platelet-derived growth factor receptor signaling pathway // traceable author statement /// 0050904 // diapedesis // inferred from sequence or structural similarity /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0070102 // interleukin-6-mediated signaling pathway // inferred from mutant phenotype","0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from direct assay /// 0030054 // cell junction // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0031234 // extrinsic to internal side of plasma membrane // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from direct assay /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from electronic annotation /// 0005154 // epidermal growth factor receptor binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from direct assay /// 0008289 // lipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0045295 // gamma-catenin binding // inferred from electronic annotation /// 0045296 // cadherin binding // inferred from electronic annotation /// 0050839 // cell adhesion molecule binding // inferred from electronic annotation","chr5:108527194-108532539 (+) // 97.54 // q21.3"]
["11737234_s_at",169.75049,157.91508,202.25282,220.41296,276.3757,205.51933,-0.26430035,-0.36856747,-0.011557102,0.11249256,0.4389143,0.011557579,0.31103054,0.07347738,-1.3217627,-0.40246317,1.3217627,"down","USP6",9098,"0006464 // cellular protein modification process // non-traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0016579 // protein deubiquitination // inferred from direct assay /// 0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0060627 // regulation of vesicle-mediated transport // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // traceable author statement /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from direct assay","0003676 // nucleic acid binding // traceable author statement /// 0004197 // cysteine-type endopeptidase activity // traceable author statement /// 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr17:5031686-5078339 (+) // 97.26 // p13.2"]
["11756771_x_at",161.8479,172.98825,184.41522,199.86299,214.8491,207.63838,-0.246346,-0.150311,-0.05802679,0.05802679,0.16233921,0.11308813,0.13325258,0.01340615,-1.1997324,-0.2627127,1.1997324,"down","SPTY2D1",144108,"","","","chr11:18627948-18634012 (-) // 95.06 // p15.1"]
["11728637_a_at",5814.3286,5921.5503,5968.781,5808.4165,6172.6113,6178.3755,-0.032093048,-0.005730629,0.005730629,-0.0335598,0.054175377,0.05552101,0.63440937,0.3163249,-1.0253216,-0.036076497,1.0253216,"down","ATP5A1",498,"0001937 // negative regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0006172 // ADP biosynthetic process // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from sequence or structural similarity /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006754 // ATP biosynthetic process // inferred by curator /// 0006754 // ATP biosynthetic process // non-traceable author statement /// 0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0009790 // embryo development // inferred from sequence or structural similarity /// 0009790 // embryo development // inferred from electronic annotation /// 0015986 // ATP synthesis coupled proton transport // inferred from electronic annotation /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0042776 // mitochondrial ATP synthesis coupled proton transport // inferred by curator /// 0042776 // mitochondrial ATP synthesis coupled proton transport // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046034 // ATP metabolic process // inferred from electronic annotation","0000275 // mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) // inferred from electronic annotation /// 0005739 // mitochondrion // inferred by curator /// 0005739 // mitochondrion // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from direct assay /// 0005759 // mitochondrial matrix // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008180 // signalosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016469 // proton-transporting two-sector ATPase complex // inferred from electronic annotation /// 0033178 // proton-transporting two-sector ATPase complex, catalytic domain // inferred from electronic annotation /// 0045261 // proton-transporting ATP synthase complex, catalytic core F(1) // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0016887 // ATPase activity // inferred from electronic annotation /// 0022857 // transmembrane transporter activity // inferred by curator /// 0042288 // MHC class I protein binding // inferred from direct assay /// 0043499 // eukaryotic cell surface binding // inferred from direct assay /// 0043531 // ADP binding // inferred from electronic annotation /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism // inferred from sequence or structural similarity /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism // inferred from electronic annotation /// 0046961 // proton-transporting ATPase activity, rotational mechanism // inferred from electronic annotation","chr18:43664112-43678287 (-) // 93.66 // q21.1"]
["11722243_a_at",59.281975,65.06642,68.17193,68.98207,66.97268,77.97789,-0.18878174,-0.054461956,0.012802601,0.029846191,-0.012802601,0.20668983,0.46772155,0.16632394,-1.1106402,-0.15139148,1.1106402,"down","FBXO25",26260,"0016567 // protein ubiquitination // inferred from sequence or structural similarity /// 0016567 // protein ubiquitination // non-traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation","0000151 // ubiquitin ligase complex // non-traceable author statement /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0019005 // SCF ubiquitin ligase complex // inferred from sequence or structural similarity","0003779 // actin binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // non-traceable author statement","chr8:356807-419873 (+) // 95.1 // p23.3"]
["11743732_a_at",363.5695,409.7744,379.1419,313.30807,295.8158,297.8464,0.1073246,0.27992344,0.16783142,-0.1073246,-0.19020748,-0.1803379,0.07400438,0.0037676592,1.2695494,0.34431648,1.2695494,"up","RCAN1",1827,"0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007417 // central nervous system development // traceable author statement /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008015 // blood circulation // traceable author statement /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0019722 // calcium-mediated signaling // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0043666 // regulation of phosphoprotein phosphatase activity // inferred from electronic annotation /// 0048741 // skeletal muscle fiber development // inferred from electronic annotation /// 0051151 // negative regulation of smooth muscle cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr21:35888789-35987510 (-) // 95.78 // q22.12"]
["11724603_a_at",89.556244,97.622696,90.54806,80.97058,88.96137,89.66162,-0.0008482933,0.12357426,0.015041351,-0.14624453,-0.010463715,0.0008482933,0.4930906,0.1857699,1.0701965,0.09787573,1.0701965,"up","ZNF219",51222,"0006351 // transcription, DNA-dependent // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0004969 // histamine receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:21558236-21566808 (-) // 88.24 // q11.2"]
["11764222_at",19.473394,21.624697,26.936066,18.984352,24.705135,23.69243,-0.21704865,-0.065873146,0.2509861,-0.25374222,0.1262579,0.065873146,0.98603654,0.95913446,1.00688,0.009891817,1.00688,"up","","","","","","chr2:39011611-39012122 (-) // 83.98 // p22.1"]
["11722426_a_at",6.651561,8.004565,6.9303637,7.6292534,7.7436047,7.7717156,-0.20858073,0.058549404,-0.14934254,-0.010731697,0.010731697,0.015959263,0.58595,0.26620546,-1.0755771,-0.105110995,1.0755771,"down","FGL2",10875,"0007165 // signal transduction // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005577 // fibrinogen complex // traceable author statement /// 0005615 // extracellular space // inferred from electronic annotation","0005102 // receptor binding // inferred from electronic annotation","chr7:76822675-76829201 (-) // 84.6 // q11.23"]
["11757396_s_at",1483.6951,1332.228,1396.6796,1565.5568,1442.7228,1399.243,0.06247425,-0.092879295,-0.024719238,0.13995552,0.022073746,-0.022073746,0.68718743,0.3804816,-1.0461042,-0.06502655,1.0461042,"down","ANXA8 /// ANXA8L1 /// ANXA8L2","244 /// 653145 /// 728113","0007596 // blood coagulation // inferred from electronic annotation /// 0007599 // hemostasis // inferred from electronic annotation","","0005509 // calcium ion binding // inferred from electronic annotation /// 0005544 // calcium-dependent phospholipid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:47157982-47158897 (-) // 84.59 // q11.22"]
["11758071_s_at",33.571335,37.85877,36.51132,39.615246,38.304432,37.207428,-0.16087914,0.012518406,-0.039765358,0.07794666,0.029402256,-0.012518406,0.48188126,0.17700592,-1.0675613,-0.09431887,1.0675613,"down","SULF1",23213,"0001822 // kidney development // inferred from sequence or structural similarity /// 0001822 // kidney development // inferred from electronic annotation /// 0001937 // negative regulation of endothelial cell proliferation // inferred from direct assay /// 0002063 // chondrocyte development // inferred from sequence or structural similarity /// 0002063 // chondrocyte development // inferred from electronic annotation /// 0003094 // glomerular filtration // inferred from sequence or structural similarity /// 0003094 // glomerular filtration // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from sequence or structural similarity /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from electronic annotation /// 0014846 // esophagus smooth muscle contraction // inferred from sequence or structural similarity /// 0014846 // esophagus smooth muscle contraction // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from direct assay /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from direct assay /// 0030201 // heparan sulfate proteoglycan metabolic process // inferred from direct assay /// 0030201 // heparan sulfate proteoglycan metabolic process // non-traceable author statement /// 0030201 // heparan sulfate proteoglycan metabolic process // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from mutant phenotype /// 0030513 // positive regulation of BMP signaling pathway // inferred from mutant phenotype /// 0032836 // glomerular basement membrane development // inferred from sequence or structural similarity /// 0032836 // glomerular basement membrane development // inferred from electronic annotation /// 0035860 // glial cell-derived neurotrophic factor receptor signaling pathway // inferred from sequence or structural similarity /// 0035860 // glial cell-derived neurotrophic factor receptor signaling pathway // inferred from electronic annotation /// 0040036 // regulation of fibroblast growth factor receptor signaling pathway // inferred from mutant phenotype /// 0040037 // negative regulation of fibroblast growth factor receptor signaling pathway // inferred from mutant phenotype /// 0040037 // negative regulation of fibroblast growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0040037 // negative regulation of fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from direct assay /// 0048706 // embryonic skeletal system development // inferred from sequence or structural similarity /// 0048706 // embryonic skeletal system development // inferred from electronic annotation /// 0051216 // cartilage development // inferred from sequence or structural similarity /// 0051216 // cartilage development // inferred from electronic annotation /// 0060348 // bone development // inferred from sequence or structural similarity /// 0060348 // bone development // inferred from electronic annotation /// 0060384 // innervation // inferred from sequence or structural similarity /// 0060384 // innervation // inferred from electronic annotation /// 0060686 // negative regulation of prostatic bud formation // inferred from sequence or structural similarity /// 0060686 // negative regulation of prostatic bud formation // inferred from electronic annotation","0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // non-traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005795 // Golgi stack // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay","0003824 // catalytic activity // inferred from electronic annotation /// 0004065 // arylsulfatase activity // inferred from direct assay /// 0004065 // arylsulfatase activity // inferred from mutant phenotype /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008449 // N-acetylglucosamine-6-sulfatase activity // inferred from direct assay /// 0008449 // N-acetylglucosamine-6-sulfatase activity // inferred from mutant phenotype /// 0008449 // N-acetylglucosamine-6-sulfatase activity // inferred from electronic annotation /// 0008484 // sulfuric ester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:70571572-70572292 (+) // 98.49 // q13.3"]
["11762015_at",9.405194,8.661178,10.10903,9.319347,10.458757,8.375018,0.0066144466,-0.11228013,0.110729456,-0.0066144466,0.15979624,-0.1607511,0.99046993,0.972002,1.0029231,0.0042110346,1.0029231,"up","EPB41L4A",64097,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0019898 // extrinsic to membrane // inferred from electronic annotation","0008092 // cytoskeletal protein binding // inferred from electronic annotation","chr5:111599122-111755010 (-) // 86.01 // q22.2"]
["11764105_at",11.981234,12.671275,12.292095,15.591733,12.480246,12.51419,-0.0608294,0.019956112,-0.02387476,0.31917572,-0.0019593239,0.0019590855,0.62512785,0.30522364,-1.0927584,-0.1279745,1.0927584,"down","","","","","","chr7:48122624-48123183 (-) // 57.22 // p12.3"]
["11727897_a_at",1412.0938,1363.5571,1340.4291,1020.814,934.62213,884.9924,0.27162838,0.22116756,0.19648743,-0.19648743,-0.3237524,-0.4024706,0.042418566,0.0010983213,1.4512854,0.5373312,1.4512854,"up","NAA38",51691,"0000398 // nuclear mRNA splicing, via spliceosome // non-traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017070 // U6 snRNA binding // non-traceable author statement","chr7:117824085-117833660 (+) // 83.17 // q31.31"]
["11732797_x_at",201.22292,217.10806,219.0377,226.98044,220.55019,212.74779,-0.11600208,-0.006382942,0.006382942,0.057771206,0.016310215,-0.035652637,0.65388525,0.33781755,-1.0363253,-0.05147698,1.0363253,"down","KIAA1841",84542,"","","","chr2:61293004-61351411 (+) // 89.75 // p16.1"]
["11761694_at",45.55055,46.762043,46.062668,40.689598,51.280006,53.451977,-0.026999474,0.01086998,-0.01086998,-0.18980789,0.14392853,0.2037754,0.85313195,0.64246994,-1.0436456,-0.061631914,1.0436456,"down","LOC100289424",100289424,"","","","chr10:134777218-134778783 (-) // 76.68 // q26.3"]
["11745160_s_at",28.559322,26.609545,28.391607,28.710201,27.587303,27.865633,0.021986008,-0.08003187,0.0134887695,0.029587746,-0.027971268,-0.0134887695,0.9179954,0.78289706,-1.0075804,-0.010894963,1.0075804,"down","TGFA",7039,"0000165 // MAPK cascade // inferred from direct assay /// 0000187 // activation of MAPK activity // inferred from direct assay /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043526 // neuroprotection // inferred from electronic annotation /// 0045741 // positive regulation of epidermal growth factor-activated receptor activity // inferred from direct assay /// 0045840 // positive regulation of mitosis // inferred from direct assay /// 0048523 // negative regulation of cellular process // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from direct assay /// 0051480 // cytosolic calcium ion homeostasis // inferred from electronic annotation /// 0051781 // positive regulation of cell division // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // non-traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0001948 // glycoprotein binding // inferred from electronic annotation /// 0004708 // MAP kinase kinase activity // inferred from direct assay /// 0005154 // epidermal growth factor receptor binding // inferred from direct assay /// 0005154 // epidermal growth factor receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from direct assay /// 0008083 // growth factor activity // inferred from electronic annotation","chr2:70676450-70780904 (-) // 100.0 // p13.3"]
["11737647_at",15.938036,15.167377,15.376602,15.163934,13.965094,15.132371,0.071666,0.00016379356,0.019928932,-0.00016379356,-0.11898255,-0.003169775,0.49140328,0.18444179,1.0507054,0.07135826,1.0507054,"up","EFCAB4B",84766,"0002115 // store-operated calcium entry // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0032237 // activation of store-operated calcium channel activity // inferred from mutant phenotype /// 0051928 // positive regulation of calcium ion transport // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay","0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr12:3749553-3862366 (-) // 94.39 // p13.32"]
["11733277_a_at",6.0945706,6.4790034,5.7198257,6.306129,6.5261335,6.806561,-0.0687387,0.0195086,-0.16029215,-0.0195086,0.029965162,0.09066272,0.4651143,0.1643225,-1.0744119,-0.10354715,1.0744119,"down","SLC2A2",6514,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0015755 // fructose transport // inferred from electronic annotation /// 0015758 // glucose transport // not recorded /// 0015758 // glucose transport // traceable author statement /// 0015758 // glucose transport // inferred from electronic annotation /// 0031018 // endocrine pancreas development // traceable author statement /// 0035428 // hexose transmembrane transport // traceable author statement /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070837 // dehydroascorbic acid transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0005903 // brush border // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0031526 // brush border membrane // inferred from electronic annotation","0005158 // insulin receptor binding // inferred from electronic annotation /// 0005215 // transporter activity // inferred from electronic annotation /// 0005355 // glucose transmembrane transporter activity // not recorded /// 0005355 // glucose transmembrane transporter activity // inferred from electronic annotation /// 0005355 // glucose transmembrane transporter activity // traceable author statement /// 0015149 // hexose transmembrane transporter activity // traceable author statement /// 0022857 // transmembrane transporter activity // inferred from electronic annotation /// 0022891 // substrate-specific transmembrane transporter activity // inferred from electronic annotation /// 0033300 // dehydroascorbic acid transporter activity // inferred from electronic annotation /// 0055056 // D-glucose transmembrane transporter activity // inferred from electronic annotation","chr3:170713801-170744768 (-) // 99.31 // q26.2"]
["11730952_a_at",193.15747,220.27765,211.68108,148.5391,180.62643,201.93822,-0.032067776,0.15747738,0.10004616,-0.4110031,-0.12883663,0.032068253,0.45616388,0.15834068,1.1846075,0.24440913,1.1846075,"up","PDK3",5165,"0000160 // two-component signal transduction system (phosphorelay) // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006006 // glucose metabolic process // traceable author statement /// 0006090 // pyruvate metabolic process // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0010510 // regulation of acetyl-CoA biosynthetic process from pyruvate // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018106 // peptidyl-histidine phosphorylation // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0000155 // two-component sensor activity // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // traceable author statement /// 0004673 // protein histidine kinase activity // inferred from electronic annotation /// 0004740 // pyruvate dehydrogenase (acetyl-transferring) kinase activity // inferred from electronic annotation /// 0004740 // pyruvate dehydrogenase (acetyl-transferring) kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chrX:24483343-24558207 (+) // 99.17 // p22.11"]
["11718170_a_at",205.35202,135.2426,134.93098,176.4384,139.60423,142.0126,0.54441833,-0.058131218,-0.06145954,0.3254838,-0.012338638,0.0123381615,0.96188885,0.89195985,1.0232189,0.033114776,1.0232189,"up","MLL4",9757,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0048096 // chromatin-mediated maintenance of transcription // non-traceable author statement /// 0051568 // histone H3-K4 methylation // inferred from direct assay /// 0051568 // histone H3-K4 methylation // inferred from mutant phenotype /// 0051568 // histone H3-K4 methylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0035097 // histone methyltransferase complex // inferred from direct assay /// 0035097 // histone methyltransferase complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from direct assay /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:36208910-36229779 (+) // 94.07 // q13.12"]
["11731567_a_at",209.61572,233.56705,254.46837,242.75288,287.82333,247.40099,-0.22542286,-0.06933308,0.05431652,-0.013681412,0.2320137,0.013681889,0.55097294,0.23318331,-1.1153407,-0.15748449,1.1153407,"down","MDM2",4193,"0000075 // cell cycle checkpoint // traceable author statement /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006461 // protein complex assembly // inferred from direct assay /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // inferred from mutant phenotype /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0007089 // traversing start control point of mitotic cell cycle // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from mutant phenotype /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0018205 // peptidyl-lysine modification // inferred from mutant phenotype /// 0030163 // protein catabolic process // inferred from electronic annotation /// 0031648 // protein destabilization // inferred from direct assay /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0034504 // protein localization to nucleus // inferred from direct assay /// 0042176 // regulation of protein catabolic process // inferred from direct assay /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043518 // negative regulation of DNA damage response, signal transduction by p53 class mediator // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045184 // establishment of protein localization // inferred from direct assay /// 0045787 // positive regulation of cell cycle // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045931 // positive regulation of mitotic cell cycle // inferred from mutant phenotype /// 0046677 // response to antibiotic // inferred from expression pattern /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0071157 // negative regulation of cell cycle arrest // inferred from direct assay /// 0071157 // negative regulation of cell cycle arrest // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from expression pattern","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from mutant phenotype /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from mutant phenotype /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016604 // nuclear body // inferred from direct assay /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0043234 // protein complex // inferred from direct assay","0002039 // p53 binding // inferred from physical interaction /// 0002039 // p53 binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // inferred from mutant phenotype /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:69201965-69239321 (+) // 78.58 // q15"]
["11720947_x_at",412.10678,355.06445,350.61432,671.2352,568.45105,539.1365,-0.19381618,-0.4087534,-0.4269495,0.509984,0.27020168,0.19381618,0.08580678,0.0052839294,-1.588693,-0.66784036,1.588693,"down","CA12",771,"0006730 // one-carbon metabolic process // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004089 // carbonate dehydratase activity // inferred from electronic annotation /// 0004089 // carbonate dehydratase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0016829 // lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:63614615-63674659 (-) // 87.76 // q22.2"]
["11733669_a_at",26.75266,28.848307,27.666014,30.239914,32.533276,30.534227,-0.14278793,-0.033983707,-0.09435558,0.033983707,0.13944578,0.047956944,0.17396002,0.022838965,-1.1205221,-0.16417116,1.1205221,"down","PAX3",5077,"0000435 // positive regulation of transcription from RNA polymerase II promoter by galactose // inferred from direct assay /// 0000435 // positive regulation of transcription from RNA polymerase II promoter by galactose // inferred from electronic annotation /// 0001755 // neural crest cell migration // inferred from electronic annotation /// 0001843 // neural tube closure // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0007517 // muscle organ development // inferred from electronic annotation /// 0007605 // sensory perception of sound // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0009887 // organ morphogenesis // traceable author statement /// 0016477 // cell migration // inferred from electronic annotation /// 0021527 // spinal cord association neuron differentiation // inferred from electronic annotation /// 0021549 // cerebellum development // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0030521 // androgen receptor signaling pathway // non-traceable author statement /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from electronic annotation /// 0032570 // response to progesterone stimulus // inferred from electronic annotation /// 0032870 // cellular response to hormone stimulus // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043967 // histone H4 acetylation // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048066 // developmental pigmentation // inferred from electronic annotation /// 0048663 // neuron fate commitment // inferred from electronic annotation /// 0060206 // estrous cycle phase // inferred from electronic annotation /// 0060594 // mammary gland specification // inferred from electronic annotation /// 2001038 // regulation of cellular response to drug // inferred from electronic annotation /// 2001141 // regulation of RNA biosynthetic process // inferred from electronic annotation","0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016922 // ligand-dependent nuclear receptor binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from direct assay /// 0035257 // nuclear hormone receptor binding // inferred from direct assay /// 0035257 // nuclear hormone receptor binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0050681 // androgen receptor binding // non-traceable author statement","chr2:223158348-223163700 (-) // 93.5 // q36.1"]
["11750492_a_at",258.04254,208.4726,204.96463,207.52621,180.12833,188.8562,0.3232746,0.015523434,-0.008959293,0.008959293,-0.19530964,-0.12704611,0.45245004,0.15523171,1.1602308,0.21441177,1.1602308,"up","RNF216",54476,"0006915 // apoptotic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0032648 // regulation of interferon-beta production // inferred from direct assay /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0050691 // regulation of defense response to virus by host // inferred from direct assay /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:5662209-5821257 (-) // 99.92 // p22.1"]
["11754372_x_at",21.288883,20.902905,23.997746,21.087349,20.70389,20.982203,0.017328262,-0.009068489,0.1901269,0.0036058426,-0.022870064,-0.0036058426,0.6256729,0.3064714,1.0524504,0.07375227,1.0524504,"up","CERS4",79603,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0030148 // sphingolipid biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046513 // ceramide biosynthetic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0050291 // sphingosine N-acyltransferase activity // inferred from electronic annotation","chr19:8315409-8327305 (+) // 87.21 // p13.2"]
["11753119_x_at",82.85296,85.0059,85.97331,77.519165,106.324646,106.869865,-0.045172215,-0.008162975,0.008162975,-0.14117241,0.31467867,0.32205772,0.6260449,0.30681843,-1.1330765,-0.18024532,1.1330765,"down","CMTM5",116173,"0006935 // chemotaxis // inferred from electronic annotation","0005615 // extracellular space // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation","chr14:23846254-23848980 (+) // 96.99 // q11.2"]
["11755632_a_at",19.055704,20.423471,18.798994,17.542187,19.429909,21.207094,-0.014028072,0.08597708,-0.033595562,-0.13342237,0.014028072,0.14029598,0.98302555,0.95008886,1.0040404,0.005817264,1.0040404,"up","MYH14",79784,"0007411 // axon guidance // traceable author statement /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0030048 // actin filament-based movement // inferred from electronic annotation","0001725 // stress fiber // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016459 // myosin complex // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation","0000146 // microfilament motor activity // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030898 // actin-dependent ATPase activity // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from electronic annotation","chr19:50783290-50813796 (+) // 92.75 // q13.33"]
["11755668_s_at",315.85858,289.2418,317.88956,244.0894,265.04834,278.4214,0.15450573,0.027503014,0.16375256,-0.21736288,-0.09851742,-0.027503014,0.20375648,0.03141189,1.1726031,0.22971481,1.1726031,"up","ATP5J2-PTCD1 /// PTCD1","100526740 /// 26024","","","","chr7:99016756-99036377 (-) // 99.84 // q22.1"]
["11717584_a_at",43.150856,50.724167,51.433693,53.583794,48.359035,45.804726,-0.19884014,0.034443855,0.054484367,0.11356735,-0.034443855,-0.11273289,0.9343501,0.8204237,-1.0177859,-0.02543412,1.0177859,"down","VAPB",9217,"0006665 // sphingolipid metabolic process // traceable author statement /// 0006874 // cellular calcium ion homeostasis // inferred from mutant phenotype /// 0006986 // response to unfolded protein // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // inferred from direct assay /// 0008219 // cell death // inferred from electronic annotation /// 0019048 // virus-host interaction // inferred from direct assay /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045070 // positive regulation of viral genome replication // inferred from mutant phenotype","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0048487 // beta-tubulin binding // inferred from direct assay","chr20:56964174-57022672 (+) // 94.01 // q13.32"]
["11755180_x_at",93.488014,105.435104,90.51876,67.23181,78.97701,70.27625,0.14495659,0.31845903,0.09839201,-0.33068085,-0.09839201,-0.266788,0.1271456,0.012146987,1.337207,0.41922277,1.337207,"up","TCF7",6932,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // not recorded /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // not recorded /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006955 // immune response // traceable author statement /// 0007420 // brain development // not recorded /// 0016055 // Wnt receptor signaling pathway // not recorded /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0022008 // neurogenesis // not recorded /// 0030538 // embryonic genitalia morphogenesis // inferred from electronic annotation /// 0033153 // T cell receptor V(D)J recombination // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0046632 // alpha-beta T cell differentiation // inferred from electronic annotation /// 0048557 // embryonic digestive tract morphogenesis // inferred from electronic annotation /// 0048619 // embryonic hindgut morphogenesis // inferred from electronic annotation /// 0048699 // generation of neurons // not recorded /// 0060070 // canonical Wnt receptor signaling pathway // not recorded /// 0071353 // cellular response to interleukin-4 // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // not recorded","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // not recorded /// 0043565 // sequence-specific DNA binding // not recorded /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay","chr5:133476225-133483927 (+) // 89.4 // q31.1"]
["11732370_a_at",672.09436,756.05554,777.4827,1178.7555,1139.2056,1005.6664,-0.39578152,-0.2259531,-0.18563461,0.41474724,0.36551094,0.18563461,0.07009711,0.0033760709,-1.5063816,-0.5910873,1.5063816,"down","CUX1",1523,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0000301 // retrograde transport, vesicle recycling within Golgi // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006891 // intra-Golgi vesicle-mediated transport // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0042491 // auditory receptor cell differentiation // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030173 // integral to Golgi membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0030674 // protein binding, bridging // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr7:101559392-101894560 (+) // 96.23 // q22.1"]
["11747698_x_at",14.80598,14.0677,12.55512,15.319774,12.250379,10.990094,0.15584898,0.08205533,-0.08205533,0.20506406,-0.1175046,-0.27412724,0.7774979,0.5090608,1.0823289,0.11413899,1.0823289,"up","TCF4",6925,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006352 // transcription initiation, DNA-dependent // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0007399 // nervous system development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0065004 // protein-DNA complex assembly // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from sequence or structural similarity /// 0005667 // transcription factor complex // inferred from electronic annotation","0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from sequence or structural similarity /// 0001011 // sequence-specific DNA binding RNA polymerase recruiting transcription factor activity // inferred from sequence or structural similarity /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from sequence or structural similarity /// 0001087 // TFIIB-class binding transcription factor activity // inferred from sequence or structural similarity /// 0001093 // TFIIB-class transcription factor binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from sequence or structural similarity /// 0046982 // protein heterodimerization activity // non-traceable author statement /// 0070888 // E-box binding // inferred from sequence or structural similarity","chr18:52895094-53089743 (-) // 97.67 // q21.2"]
["11729167_a_at",202.16194,220.72287,211.88954,219.64188,225.72977,204.48204,-0.09372139,0.03300333,-0.025920391,0.025920391,0.065363884,-0.07725859,0.820343,0.5820444,-1.023531,-0.03355474,1.023531,"down","DCTD",1635,"0006206 // pyrimidine base metabolic process // traceable author statement /// 0006220 // pyrimidine nucleotide metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009165 // nucleotide biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046134 // pyrimidine nucleoside biosynthetic process // traceable author statement /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement","0005829 // cytosol // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004132 // dCMP deaminase activity // not recorded /// 0004132 // dCMP deaminase activity // inferred from electronic annotation /// 0004132 // dCMP deaminase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016810 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:183811246-183838747 (-) // 96.16 // q35.1"]
["11721598_a_at",8.723781,9.433175,9.455931,9.710559,9.089234,9.612697,-0.1145277,-0.0017380714,0.0017380714,0.040072918,-0.055322886,0.025460005,0.7298232,0.43835816,-1.0292399,-0.04157928,1.0292399,"down","EFS",10278,"0007155 // cell adhesion // inferred from electronic annotation /// 0035556 // intracellular signal transduction // traceable author statement","0005737 // cytoplasm // traceable author statement","0017124 // SH3 domain binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction","chr14:23825610-23834961 (-) // 96.0 // q11.2"]
["11740575_a_at",12.083016,13.8607435,12.941599,10.943901,12.46213,14.137422,-0.071802616,0.12622166,0.027232409,-0.21465635,-0.027232647,0.15473604,0.86474645,0.66608477,1.0397726,0.056268085,1.0397726,"up","SORCS1",114815,"0007218 // neuropeptide signaling pathway // non-traceable author statement","0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008188 // neuropeptide receptor activity // non-traceable author statement","chr10:108333420-108924466 (-) // 94.17 // q25.1"]
["11758323_s_at",541.8275,546.85535,557.5566,524.85956,513.22327,541.96075,-0.00017738342,0.013148308,0.041107178,-0.046079636,-0.078424454,0.00017738342,0.33098242,0.08289074,1.0420816,0.059468243,1.0420816,"up","VOPP1",81552,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype","0005768 // endosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from direct assay /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031301 // integral to organelle membrane // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0004871 // signal transducer activity // inferred from mutant phenotype","chr1:148193220-148194190 (+) // 94.3 // q21.2 /// chr7:55540213-55640134 (-) // 90.13 // p11.2"]
["11732556_a_at",9.370382,10.8518095,8.815759,8.370821,9.988362,10.566101,-0.0460701,0.16568589,-0.13409328,-0.2088089,0.0460701,0.12719297,0.98674786,0.960938,1.0048797,0.007022817,1.0048797,"up","FASLG",356,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from genetic interaction /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // traceable author statement /// 0006925 // inflammatory cell apoptotic process // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // inferred from direct assay /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // inferred from electronic annotation /// 0008625 // induction of apoptosis via death domain receptors // inferred from electronic annotation /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0016525 // negative regulation of angiogenesis // inferred from direct assay /// 0030644 // cellular chloride ion homeostasis // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0033554 // cellular response to stress // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0045742 // positive regulation of epidermal growth factor receptor signaling pathway // inferred from electronic annotation /// 0046666 // retinal cell programmed cell death // inferred from electronic annotation /// 0048388 // endosomal lumen acidification // inferred from electronic annotation /// 0060554 // induction of necroptosis of activated-T cells // inferred from direct assay /// 0060555 // induction of necroptosis by extracellular signals // inferred from direct assay /// 0070265 // necrotic cell death // inferred from direct assay /// 0070848 // response to growth factor stimulus // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0005901 // caveola // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043202 // lysosomal lumen // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0060205 // cytoplasmic membrane-bounded vesicle lumen // inferred from electronic annotation","0005102 // receptor binding // traceable author statement /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005164 // tumor necrosis factor receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:172628147-172636013 (+) // 88.62 // q24.3"]
["11734601_at",14.469434,14.734463,15.131421,13.029676,13.629949,16.60004,-0.013093233,0.013092995,0.05144596,-0.16430044,-0.099321604,0.1850853,0.8865961,0.7110727,1.0304879,0.04332756,1.0304879,"up","TAS2R43 /// TAS2R45","259289 /// 259291","0001580 // detection of chemical stimulus involved in sensory perception of bitter taste // inferred from direct assay /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred by curator /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050909 // sensory perception of taste // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred by curator /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031514 // motile cilium // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0060170 // cilium membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0008527 // taste receptor activity // inferred from direct assay /// 0033038 // bitter taste receptor activity // inferred from direct assay","chr12:11243929-11244918 (-) // 82.6 // p13.2"]
["11736569_at",8.191608,9.310573,9.06617,9.025471,9.562411,9.405504,-0.16553473,0.019188404,-0.019188404,-0.02567935,0.057693005,0.03382373,0.5980611,0.27809122,-1.054913,-0.07712408,1.054913,"down","PON1",5444,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0009605 // response to external stimulus // non-traceable author statement /// 0009636 // response to toxin // inferred from electronic annotation /// 0010875 // positive regulation of cholesterol efflux // inferred from direct assay /// 0019439 // aromatic compound catabolic process // inferred from direct assay /// 0032411 // positive regulation of transporter activity // inferred from direct assay /// 0034445 // negative regulation of plasma lipoprotein particle oxidation // inferred from direct assay /// 0046395 // carboxylic acid catabolic process // inferred from direct assay /// 0046434 // organophosphate catabolic process // inferred from direct assay /// 0046470 // phosphatidylcholine metabolic process // inferred from direct assay /// 0051099 // positive regulation of binding // inferred from direct assay","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0034364 // high-density lipoprotein particle // inferred from direct assay /// 0034364 // high-density lipoprotein particle // traceable author statement /// 0034364 // high-density lipoprotein particle // inferred from electronic annotation /// 0034366 // spherical high-density lipoprotein particle // inferred from direct assay","0004063 // aryldialkylphosphatase activity // inferred from direct assay /// 0004063 // aryldialkylphosphatase activity // inferred from electronic annotation /// 0004064 // arylesterase activity // inferred from direct assay /// 0004064 // arylesterase activity // non-traceable author statement /// 0004064 // arylesterase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005543 // phospholipid binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:94926987-94954019 (-) // 93.67 // q21.3"]
["11733011_x_at",42.33994,43.326637,39.39971,40.469357,37.94088,43.78046,0.03259468,0.065829754,-0.07123947,-0.03259468,-0.12567139,0.08086252,0.8601646,0.65615,1.0244594,0.034862757,1.0244594,"up","SLC44A4",80736,"0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:31830973-31846823 (-) // 87.5 // p21.33"]
["11752496_a_at",47.957638,57.255604,52.905773,54.092358,45.625195,56.967438,-0.1576643,0.09799194,-0.015999794,0.015999794,-0.22959423,0.090713024,0.9653217,0.9034155,1.0109674,0.015736438,1.0109674,"up","GAS7",8522,"0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0007050 // cell cycle arrest // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0030041 // actin filament polymerization // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0051017 // actin filament bundle assembly // inferred from electronic annotation","0001726 // ruffle // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005884 // actin filament // inferred from electronic annotation","0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0051015 // actin filament binding // inferred from electronic annotation","chr17:9819241-9939878 (-) // 99.9 // p13.1"]
["11744093_a_at",856.4593,1079.5004,982.1758,612.0143,724.389,826.0211,0.02610302,0.36001015,0.22369957,-0.4587164,-0.21551704,-0.02610302,0.2594912,0.050950646,1.3535202,0.43671638,1.3535202,"up","EEF1A2",1917,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006414 // translational elongation // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0010035 // response to inorganic substance // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005853 // eukaryotic translation elongation factor 1 complex // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0008135 // translation factor activity, nucleic acid binding // non-traceable author statement","chr20:62119364-62130668 (-) // 86.17 // q13.33"]
["11733928_a_at",35.400425,37.117287,41.98656,40.15181,43.965317,42.47179,-0.21392965,-0.14560509,0.03223133,-0.03223133,0.09866953,0.048808575,0.44401956,0.14899346,-1.1076612,-0.14751673,1.1076612,"down","ARMC8",25852,"","","","chr3:137906147-137965728 (+) // 94.37 // q22.3"]
["11746668_a_at",641.09576,686.5934,672.3187,768.6742,719.42224,727.8892,-0.13260746,-0.033691406,-0.06400204,0.12922478,0.033691406,0.05057144,0.17637247,0.023498476,-1.1079782,-0.14792952,1.1079782,"down","ALDH9A1",223,"0001822 // kidney development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0006081 // cellular aldehyde metabolic process // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0009437 // carnitine metabolic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042136 // neurotransmitter biosynthetic process // inferred from direct assay /// 0042445 // hormone metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045329 // carnitine biosynthetic process // inferred from electronic annotation /// 0045329 // carnitine biosynthetic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0004028 // 3-chloroallyl aldehyde dehydrogenase activity // traceable author statement /// 0004029 // aldehyde dehydrogenase (NAD) activity // inferred from direct assay /// 0004029 // aldehyde dehydrogenase (NAD) activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016620 // oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0019145 // aminobutyraldehyde dehydrogenase activity // inferred from direct assay /// 0019145 // aminobutyraldehyde dehydrogenase activity // inferred from electronic annotation /// 0033737 // 1-pyrroline dehydrogenase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043176 // amine binding // inferred from electronic annotation /// 0047105 // 4-trimethylammoniobutyraldehyde dehydrogenase activity // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation","chr1:165637910-165667823 (-) // 88.96 // q24.1"]
["11727335_a_at",20.177397,27.718222,27.947151,23.331514,26.746862,26.203335,-0.39181995,0.06627464,0.07814121,-0.18228006,0.014809608,-0.014809608,0.965028,0.9025243,-1.0151607,-0.021708095,1.0151607,"down","ACMSD",130013,"0006569 // tryptophan catabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046874 // quinolinate metabolic process // inferred from direct assay","0005829 // cytosol // inferred from direct assay","0001760 // aminocarboxymuconate-semialdehyde decarboxylase activity // inferred from direct assay /// 0001760 // aminocarboxymuconate-semialdehyde decarboxylase activity // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:135596185-135659645 (+) // 98.38 // q21.3"]
["11737440_a_at",34.727226,30.655117,30.327978,27.747187,26.072754,27.95529,0.25418186,0.07424259,0.05876398,-0.06954384,-0.15934229,-0.05876398,0.20877136,0.03298837,1.1687336,0.22494611,1.1687336,"up","BMF",90427,"0006915 // apoptotic process // inferred from sequence or structural similarity /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0032464 // positive regulation of protein homooligomerization // inferred from sequence or structural similarity /// 0032464 // positive regulation of protein homooligomerization // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from sequence or structural similarity /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from electronic annotation","0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016459 // myosin complex // inferred from sequence or structural similarity /// 0016459 // myosin complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr15:40380093-40398649 (-) // 95.53 // q15.1"]
["11723103_x_at",115.32193,160.32831,163.76367,175.19177,276.6495,168.34099,-0.52583504,-0.05047226,-0.019886017,0.077433586,0.73655796,0.01988554,0.46799082,0.16654274,-1.3915474,-0.47669008,1.3915474,"down","GNB4",59345,"0006112 // energy reserve metabolic process // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0071377 // cellular response to glucagon stimulus // traceable author statement","0005886 // plasma membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation","chr3:179113610-179169378 (-) // 82.48 // q26.33"]
["11746836_a_at",16.608866,16.665709,19.740658,16.328186,21.29768,22.210468,-0.12707281,-0.122143745,0.122143745,-0.15166187,0.2316699,0.29221344,0.67210627,0.36097392,-1.122279,-0.16643144,1.122279,"down","TMEFF2",23671,"","0005576 // extracellular region // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:192813774-193059642 (-) // 97.2 // q32.3"]
["11759529_at",11.614621,11.8089695,12.152893,13.351275,13.147219,11.363407,-0.044649363,-0.020708323,0.020708323,0.15638614,0.13416624,-0.076195955,0.63975346,0.3223052,-1.06167,-0.086335324,1.06167,"down","ZC3H15",55854,"0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:187350884-187374697 (+) // 95.33 // q32.1"]
["11725792_a_at",182.63269,171.79376,167.15234,206.97205,155.06477,185.8081,0.044133663,-0.044133663,-0.08364773,0.22462463,-0.19194031,0.069001675,0.85831755,0.6527523,-1.0437512,-0.061777912,1.0437512,"down","MRE11A",4361,"0000019 // regulation of mitotic recombination // traceable author statement /// 0000075 // cell cycle checkpoint // inferred from electronic annotation /// 0000724 // double-strand break repair via homologous recombination // traceable author statement /// 0006259 // DNA metabolic process // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006302 // double-strand break repair // traceable author statement /// 0006302 // double-strand break repair // inferred from electronic annotation /// 0006303 // double-strand break repair via nonhomologous end joining // traceable author statement /// 0006310 // DNA recombination // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007004 // telomere maintenance via telomerase // traceable author statement /// 0007062 // sister chromatid cohesion // inferred from mutant phenotype /// 0007126 // meiosis // inferred from electronic annotation /// 0007129 // synapsis // inferred from electronic annotation /// 0007131 // reciprocal meiotic recombination // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0031954 // positive regulation of protein autophosphorylation // inferred from direct assay /// 0032508 // DNA duplex unwinding // inferred from mutant phenotype /// 0032876 // negative regulation of DNA endoreduplication // inferred from mutant phenotype /// 0033674 // positive regulation of kinase activity // inferred from direct assay /// 0051276 // chromosome organization // inferred from electronic annotation /// 0090305 // nucleic acid phosphodiester bond hydrolysis // traceable author statement /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0000781 // chromosome, telomeric region // inferred from direct assay /// 0000790 // nuclear chromatin // inferred from electronic annotation /// 0000794 // condensed nuclear chromosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0030870 // Mre11 complex // inferred from direct assay /// 0030870 // Mre11 complex // non-traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000014 // single-stranded DNA specific endodeoxyribonuclease activity // traceable author statement /// 0003677 // DNA binding // inferred from direct assay /// 0003690 // double-stranded DNA binding // traceable author statement /// 0004003 // ATP-dependent DNA helicase activity // inferred from mutant phenotype /// 0004518 // nuclease activity // traceable author statement /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0004520 // endodeoxyribonuclease activity // traceable author statement /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008408 // 3'-5' exonuclease activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from electronic annotation","chr11:94150170-94227040 (-) // 92.53 // q21"]
["11757741_s_at",345.47168,311.72275,293.3662,325.5512,280.03867,271.7794,0.19208431,0.043780327,-0.043780327,0.10640144,-0.11085701,-0.15404701,0.64875716,0.33206856,1.084374,0.116862364,1.084374,"up","SOX4",6659,"0001501 // skeletal system development // inferred from sequence or structural similarity /// 0001501 // skeletal system development // inferred from electronic annotation /// 0001841 // neural tube formation // inferred from sequence or structural similarity /// 0001841 // neural tube formation // inferred from electronic annotation /// 0002328 // pro-B cell differentiation // inferred from sequence or structural similarity /// 0002328 // pro-B cell differentiation // inferred from electronic annotation /// 0003183 // mitral valve morphogenesis // inferred from sequence or structural similarity /// 0003183 // mitral valve morphogenesis // inferred from electronic annotation /// 0003211 // cardiac ventricle formation // inferred from sequence or structural similarity /// 0003211 // cardiac ventricle formation // inferred from electronic annotation /// 0003215 // cardiac right ventricle morphogenesis // inferred from sequence or structural similarity /// 0003215 // cardiac right ventricle morphogenesis // inferred from electronic annotation /// 0003289 // atrial septum primum morphogenesis // inferred from sequence or structural similarity /// 0003289 // atrial septum primum morphogenesis // inferred from electronic annotation /// 0003357 // noradrenergic neuron differentiation // inferred from sequence or structural similarity /// 0003357 // noradrenergic neuron differentiation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // inferred from mutant phenotype /// 0007507 // heart development // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0014009 // glial cell proliferation // inferred from sequence or structural similarity /// 0014009 // glial cell proliferation // inferred from electronic annotation /// 0021510 // spinal cord development // inferred from sequence or structural similarity /// 0021510 // spinal cord development // inferred from electronic annotation /// 0021522 // spinal cord motor neuron differentiation // inferred from sequence or structural similarity /// 0021522 // spinal cord motor neuron differentiation // inferred from electronic annotation /// 0021782 // glial cell development // inferred from sequence or structural similarity /// 0021782 // glial cell development // inferred from electronic annotation /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from sequence or structural similarity /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0030217 // T cell differentiation // inferred from sequence or structural similarity /// 0030217 // T cell differentiation // inferred from electronic annotation /// 0031018 // endocrine pancreas development // inferred from electronic annotation /// 0031397 // negative regulation of protein ubiquitination // inferred from mutant phenotype /// 0031647 // regulation of protein stability // inferred from mutant phenotype /// 0032024 // positive regulation of insulin secretion // inferred from sequence or structural similarity /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0035910 // ascending aorta morphogenesis // inferred from sequence or structural similarity /// 0035910 // ascending aorta morphogenesis // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from sequence or structural similarity /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0042769 // DNA damage response, detection of DNA damage // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0045727 // positive regulation of translation // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046826 // negative regulation of protein export from nucleus // inferred from mutant phenotype /// 0048485 // sympathetic nervous system development // inferred from sequence or structural similarity /// 0048485 // sympathetic nervous system development // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from mutant phenotype /// 0050821 // protein stabilization // inferred from electronic annotation /// 0060070 // canonical Wnt receptor signaling pathway // inferred from sequence or structural similarity /// 0060070 // canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0060174 // limb bud formation // inferred from sequence or structural similarity /// 0060174 // limb bud formation // inferred from electronic annotation /// 0060412 // ventricular septum morphogenesis // inferred from sequence or structural similarity /// 0060412 // ventricular septum morphogenesis // inferred from electronic annotation /// 0060548 // negative regulation of cell death // inferred from sequence or structural similarity /// 0060548 // negative regulation of cell death // inferred from electronic annotation /// 0060563 // neuroepithelial cell differentiation // inferred from sequence or structural similarity /// 0060563 // neuroepithelial cell differentiation // inferred from electronic annotation /// 0060993 // kidney morphogenesis // inferred from sequence or structural similarity /// 0060993 // kidney morphogenesis // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from sequence or structural similarity /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from sequence or structural similarity /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 2000761 // positive regulation of N-terminal peptidyl-lysine acetylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay","0000976 // transcription regulatory region sequence-specific DNA binding // inferred from sequence or structural similarity /// 0000976 // transcription regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0001046 // core promoter sequence-specific DNA binding // inferred from direct assay /// 0001046 // core promoter sequence-specific DNA binding // inferred from electronic annotation /// 0001071 // nucleic acid binding transcription factor activity // inferred from mutant phenotype /// 0001071 // nucleic acid binding transcription factor activity // inferred from electronic annotation /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0001105 // RNA polymerase II transcription coactivator activity // inferred from sequence or structural similarity /// 0001105 // RNA polymerase II transcription coactivator activity // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr6:21596716-21597392 (+) // 94.1 // p22.3"]
["11727551_a_at",19.371672,18.765112,19.700794,21.47474,23.036839,21.048405,-0.07203388,-0.11792946,-0.04772854,0.07665825,0.1779604,0.04772854,0.14339425,0.015565948,-1.1328942,-0.18001308,1.1328942,"down","ADAMTS10",81794,"0006508 // proteolysis // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation","0001527 // microfibril // inferred from direct assay /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:8645125-8673133 (-) // 97.65 // p13.2"]
["11721902_a_at",226.17822,226.35652,234.95439,161.93623,172.55614,173.9452,0.18941355,0.1905508,0.2443347,-0.29262066,-0.20098114,-0.18941355,0.026332507,0.00030813218,1.352634,0.43577147,1.352634,"up","SERPINI1",5274,"0007417 // central nervous system development // traceable author statement /// 0007422 // peripheral nervous system development // traceable author statement /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // not recorded /// 0030155 // regulation of cell adhesion // inferred from electronic annotation /// 0030162 // regulation of proteolysis // not recorded","0005576 // extracellular region // inferred from electronic annotation","0004867 // serine-type endopeptidase inhibitor activity // not recorded /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // traceable author statement /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr3:167453510-167543560 (+) // 99.62 // q26.1"]
["11763571_at",27.477304,34.611664,36.402943,25.43716,32.25053,33.169514,-0.25134993,0.0816679,0.15446472,-0.36265278,-0.020267487,0.020267487,0.7973972,0.5425914,1.0835847,0.115811884,1.0835847,"up","SLC1A7",6512,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006835 // dicarboxylic acid transport // traceable author statement /// 0006835 // dicarboxylic acid transport // inferred from electronic annotation /// 0015813 // L-glutamate transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005313 // L-glutamate transmembrane transporter activity // traceable author statement /// 0015293 // symporter activity // inferred from electronic annotation /// 0017153 // sodium:dicarboxylate symporter activity // inferred from electronic annotation","chr1:53580247-53584281 (+) // 83.97 // p32.3"]
["11746180_a_at",4527.1074,4374.9126,4483.3506,6671.4424,6675.2056,5872.9043,-0.18774223,-0.2370758,-0.20175362,0.37166786,0.37248135,0.18774319,0.044074457,0.0011921417,-1.4334465,-0.5194881,1.4334465,"down","CD55",1604,"0006958 // complement activation, classical pathway // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from direct assay /// 0030449 // regulation of complement activation // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0045730 // respiratory burst // non-traceable author statement","0005576 // extracellular region // traceable author statement /// 0005625 // soluble fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay","0004872 // receptor activity // inferred from electronic annotation","chr1:207495077-207533846 (+) // 96.56 // q32.2"]
["11759203_a_at",87.72531,74.53961,84.38958,70.2675,65.291374,68.55626,0.27756023,0.042574883,0.22163248,-0.042574883,-0.1485405,-0.0781436,0.1820026,0.025067944,1.2060939,0.27034223,1.2060939,"up","ZNF223 /// ZNF284","342909 /// 7766","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:44556163-44572142 (+) // 79.7 // q13.31"]
["11736723_a_at",149.27876,139.30008,124.62285,104.83267,92.410965,100.63271,0.38518,0.285367,0.12473965,-0.124740124,-0.30669308,-0.18372965,0.09916589,0.007172518,1.3852533,0.47014982,1.3852533,"up","PDLIM7",9260,"0001503 // ossification // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // inferred from electronic annotation","0001725 // stress fiber // inferred from electronic annotation /// 0001726 // ruffle // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0030054 // cell junction // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:176910394-176924602 (-) // 100.0 // q35.3"]
["11736662_a_at",6.741384,5.959447,7.058029,5.884707,6.1867814,6.4008975,0.09931326,-0.0785532,0.16553378,-0.09676099,-0.02454257,0.02454257,0.6273325,0.30853504,1.0675855,0.094351575,1.0675855,"up","CADPS2",93664,"0006810 // transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016082 // synaptic vesicle priming // inferred from electronic annotation /// 0045921 // positive regulation of exocytosis // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:121958478-122526554 (-) // 97.07 // q31.32"]
["11725019_a_at",174.45961,145.7479,142.69847,178.89471,159.09724,150.68123,0.17218828,-0.08722973,-0.11773491,0.20840645,0.03920412,-0.039204597,0.7910208,0.5313187,-1.0573069,-0.08039418,1.0573069,"down","MST1R",4486,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0006928 // cellular component movement // traceable author statement /// 0006952 // defense response // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007338 // single fertilization // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0009615 // response to virus // inferred from direct assay /// 0009615 // response to virus // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0038145 // macrophage colony-stimulating factor signaling pathway // traceable author statement /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0045087 // innate immune response // inferred from electronic annotation /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from direct assay","0001725 // stress fiber // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005011 // macrophage colony-stimulating factor receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction","chr3:49924437-49941306 (-) // 96.95 // p21.31"]
["11727803_at",770.26776,701.14197,720.7946,843.1539,725.74396,651.6613,0.09083557,-0.044817924,-0.0049362183,0.22127151,0.0049362183,-0.15040207,0.97351974,0.92470086,-1.0080553,-0.011574826,1.0080553,"down","GJA9-MYCBP /// MYCBP","100527950 /// 26292","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from expression pattern","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay","0003713 // transcription coactivator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr1:39328636-39340206 (-) // 88.2 // p34.3"]
["11740937_x_at",22.92256,22.268589,24.044802,24.99356,25.752298,23.516697,-0.05293703,-0.09469509,0.016019821,0.07185125,0.11499596,-0.016019821,0.39112252,0.11544825,-1.0723778,-0.10081326,1.0723778,"down","LIAS",11019,"0001843 // neural tube closure // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from sequence or structural similarity /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from sequence or structural similarity /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0009107 // lipoate biosynthetic process // inferred from sequence or structural similarity /// 0009107 // lipoate biosynthetic process // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from sequence or structural similarity /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation","0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016992 // lipoate synthase activity // inferred from sequence or structural similarity /// 0016992 // lipoate synthase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation","chr4:39460664-39479269 (+) // 80.02 // p14"]
["11740966_a_at",46.915257,50.53385,60.945534,51.447277,50.76158,51.574184,-0.12335873,-0.016165733,0.2541046,0.009678841,-0.009678841,0.013233185,0.9165465,0.77897125,1.0236925,0.033782404,1.0236925,"up","LOC391322",391322,"","","","chr22:24373110-24376211 (+) // 93.91 // q11.23"]
["11732166_a_at",84.49768,89.31001,84.63959,89.73847,83.88288,86.85861,-0.021089077,0.0588212,-0.018668175,0.0657258,-0.031624794,0.018668175,0.9187993,0.7846857,-1.007818,-0.011235105,1.007818,"down","LMF1",64788,"0006888 // ER to Golgi vesicle-mediated transport // inferred from electronic annotation /// 0009306 // protein secretion // inferred from electronic annotation /// 0033578 // protein glycosylation in Golgi // inferred from electronic annotation /// 0034382 // chylomicron remnant clearance // inferred from electronic annotation /// 0051006 // positive regulation of lipoprotein lipase activity // inferred from electronic annotation /// 0051604 // protein maturation // inferred from electronic annotation /// 0090181 // regulation of cholesterol metabolic process // inferred from electronic annotation /// 0090207 // regulation of triglyceride metabolic process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr16:903629-1020999 (-) // 98.26 // p13.3"]
["11715128_s_at",54.685684,69.79153,66.51113,54.821594,71.01672,68.28602,-0.3014288,0.050459385,-0.018997192,-0.29784822,0.07556677,0.018997192,0.962755,0.89516485,-1.0155262,-0.022227425,1.0155262,"down","PCDHGB5",56101,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr5:140777694-140780151 (+) // 100.0 // q31.3"]
["11728841_a_at",48.406708,45.902996,48.430504,52.10642,53.558296,50.52081,-0.031189919,-0.10780859,-0.030480862,0.07506418,0.11471319,0.030480862,0.16776301,0.02131513,-1.0942273,-0.12991247,1.0942273,"down","PLEKHA5",54477,"","","0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0005545 // 1-phosphatidylinositol binding // non-traceable author statement","chr12:19282628-19529334 (+) // 96.91 // p12.3"]
["11724615_at",42.19263,22.055828,22.656662,34.0377,26.743574,21.754696,0.7774272,-0.15840387,-0.11962843,0.46756983,0.11962843,-0.17823696,0.9780801,0.93696696,1.0211145,0.030144604,1.0211145,"up","LIMK1",3984,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // traceable author statement /// 0032233 // positive regulation of actin filament bundle assembly // inferred from direct assay /// 0045773 // positive regulation of axon extension // inferred from sequence or structural similarity /// 0051444 // negative regulation of ubiquitin-protein ligase activity // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0043005 // neuron projection // inferred from sequence or structural similarity","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // non-traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0031072 // heat shock protein binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:73498155-73536855 (+) // 95.33 // q11.23"]
["11723313_s_at",752.8871,675.16376,679.13995,620.40283,564.72253,548.2224,0.21821213,0.061016083,0.06948757,-0.061016083,-0.19667912,-0.23945999,0.15845892,0.019065494,1.215843,0.2819569,1.215843,"up","PXMP2",5827,"","0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005777 // peroxisome // inferred from electronic annotation /// 0005778 // peroxisomal membrane // inferred from direct assay /// 0005778 // peroxisomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr12:133264125-133281571 (+) // 97.22 // q24.33"]
["11726087_at",52.001057,49.66282,52.225765,41.17614,43.49418,46.353302,0.11612177,0.04974699,0.12234259,-0.22061062,-0.1415968,-0.04974699,0.13064788,0.012874138,1.1755929,0.23338854,1.1755929,"up","HSPB3",8988,"0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // traceable author statement /// 0008219 // cell death // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","","chr5:53751430-53752207 (+) // 98.73 // q11.2"]
["11723247_a_at",33.479523,39.61522,38.66569,34.70315,39.18385,42.5867,-0.21737766,0.025398254,-0.009602547,-0.16558981,0.009602547,0.12974644,0.8499412,0.6364057,-1.0413443,-0.058447126,1.0413443,"down","SFRP1",6422,"0001649 // osteoblast differentiation // inferred from expression pattern /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001843 // neural tube closure // inferred from electronic annotation /// 0001944 // vasculature development // not recorded /// 0001954 // positive regulation of cell-matrix adhesion // inferred from sequence or structural similarity /// 0002244 // hemopoietic progenitor cell differentiation // inferred from direct assay /// 0006309 // apoptotic DNA fragmentation // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007420 // brain development // not recorded /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008406 // gonad development // not recorded /// 0008584 // male gonad development // inferred from electronic annotation /// 0008585 // female gonad development // inferred from electronic annotation /// 0009267 // cellular response to starvation // inferred from expression pattern /// 0009790 // embryo development // not recorded /// 0009950 // dorsal/ventral axis specification // inferred from direct assay /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0010564 // regulation of cell cycle process // inferred from mutant phenotype /// 0010629 // negative regulation of gene expression // inferred from direct assay /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0010719 // negative regulation of epithelial to mesenchymal transition // inferred from direct assay /// 0014034 // neural crest cell fate commitment // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from direct assay /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0022601 // menstrual cycle phase // inferred from expression pattern /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from direct assay /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from direct assay /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from mutant phenotype /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0030278 // regulation of ossification // inferred from electronic annotation /// 0030279 // negative regulation of ossification // inferred from direct assay /// 0030279 // negative regulation of ossification // inferred from mutant phenotype /// 0030279 // negative regulation of ossification // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from direct assay /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0030336 // negative regulation of cell migration // inferred from direct assay /// 0030514 // negative regulation of BMP signaling pathway // inferred from electronic annotation /// 0032855 // positive regulation of Rac GTPase activity // inferred from sequence or structural similarity /// 0033689 // negative regulation of osteoblast proliferation // inferred from mutant phenotype /// 0033689 // negative regulation of osteoblast proliferation // inferred from electronic annotation /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0042493 // response to drug // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from direct assay /// 0044345 // stromal-epithelial cell signaling involved in prostate gland development // inferred from electronic annotation /// 0045578 // negative regulation of B cell differentiation // inferred from mutant phenotype /// 0045578 // negative regulation of B cell differentiation // inferred from electronic annotation /// 0045600 // positive regulation of fat cell differentiation // inferred from direct assay /// 0045668 // negative regulation of osteoblast differentiation // inferred from electronic annotation /// 0045671 // negative regulation of osteoclast differentiation // inferred from electronic annotation /// 0045765 // regulation of angiogenesis // inferred from sequence or structural similarity /// 0045880 // positive regulation of smoothened signaling pathway // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0046546 // development of primary male sexual characteristics // inferred from electronic annotation /// 0046676 // negative regulation of insulin secretion // inferred from direct assay /// 0046851 // negative regulation of bone remodeling // inferred from mutant phenotype /// 0048147 // negative regulation of fibroblast proliferation // inferred from direct assay /// 0050679 // positive regulation of epithelial cell proliferation // inferred from mutant phenotype /// 0050680 // negative regulation of epithelial cell proliferation // inferred from direct assay /// 0050732 // negative regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0051496 // positive regulation of stress fiber assembly // inferred from sequence or structural similarity /// 0051894 // positive regulation of focal adhesion assembly // inferred from sequence or structural similarity /// 0060070 // canonical Wnt receptor signaling pathway // inferred from direct assay /// 0060071 // Wnt receptor signaling pathway, planar cell polarity pathway // inferred from electronic annotation /// 0060218 // hemopoietic stem cell differentiation // inferred from direct assay /// 0060346 // bone trabecula formation // inferred from electronic annotation /// 0060527 // prostate epithelial cord arborization involved in prostate glandular acinus morphogenesis // inferred from electronic annotation /// 0060687 // regulation of branching involved in prostate gland morphogenesis // inferred from electronic annotation /// 0060766 // negative regulation of androgen receptor signaling pathway // inferred from direct assay /// 0071305 // cellular response to vitamin D // inferred from expression pattern /// 0071347 // cellular response to interleukin-1 // inferred from expression pattern /// 0071356 // cellular response to tumor necrosis factor // inferred from direct assay /// 0071363 // cellular response to growth factor stimulus // inferred from direct assay /// 0071380 // cellular response to prostaglandin E stimulus // inferred from expression pattern /// 0071380 // cellular response to prostaglandin E stimulus // inferred from electronic annotation /// 0071391 // cellular response to estrogen stimulus // inferred from direct assay /// 0071391 // cellular response to estrogen stimulus // inferred from electronic annotation /// 0071392 // cellular response to estradiol stimulus // inferred from expression pattern /// 0071456 // cellular response to hypoxia // inferred from expression pattern /// 0071481 // cellular response to X-ray // inferred from electronic annotation /// 0071504 // cellular response to heparin // inferred from direct assay /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from expression pattern /// 0071773 // cellular response to BMP stimulus // inferred from expression pattern /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from direct assay /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from mutant phenotype /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from direct assay /// 2000052 // positive regulation of non-canonical Wnt receptor signaling pathway // inferred from direct assay /// 2000054 // negative regulation of Wnt receptor signaling pathway involved in dorsal/ventral axis specification // inferred from direct assay /// 2000080 // negative regulation of canonical Wnt receptor signaling pathway involved in controlling type B pancreatic cell proliferation // inferred from direct assay /// 2000117 // negative regulation of cysteine-type endopeptidase activity // inferred from mutant phenotype /// 2000270 // negative regulation of fibroblast apoptotic process // inferred from direct assay /// 2000271 // positive regulation of fibroblast apoptotic process // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0005622 // intracellular // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // not recorded /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0009986 // cell surface // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0042995 // cell projection // not recorded","0004197 // cysteine-type endopeptidase activity // inferred from mutant phenotype /// 0005109 // frizzled binding // inferred from physical interaction /// 0008144 // drug binding // inferred from direct assay /// 0008201 // heparin binding // inferred from direct assay /// 0017147 // Wnt-protein binding // inferred from physical interaction /// 0017147 // Wnt-protein binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // not recorded /// 0042802 // identical protein binding // inferred from physical interaction /// 0042813 // Wnt-activated receptor activity // not recorded","chr8:41119477-41166990 (-) // 97.65 // p11.21"]
["11745412_s_at",26.604542,28.836086,28.687134,30.733791,31.073534,35.424267,-0.16217804,-0.04597521,-0.05344677,0.04597521,0.061835766,0.2508874,0.2630827,0.052520674,-1.1540983,-0.20676607,1.1540983,"down","LOC441178",441178,"","","","chr6:168083767-168084736 (-) // 99.38 // q27"]
["11757242_x_at",46.53387,61.80251,67.77318,55.815365,65.90724,76.60147,-0.45576954,-0.046385765,0.08666372,-0.19338894,0.046385765,0.2633214,0.73573905,0.44581804,-1.1307421,-0.17726988,1.1307421,"down","LOC339240",339240,"","0005576 // extracellular region // inferred from electronic annotation","","chr17:18325494-18328647 (+) // 80.24 // p11.2 /// chr17:20422385-20425541 (-) // 82.71 // p11.2 /// chr17:16750714-16753867 (-) // 73.04 // p11.2"]
["11744034_a_at",1913.5333,1883.339,1769.7239,1827.1611,1461.303,1596.8901,0.08967495,0.06672859,-0.023039818,0.023039818,-0.29930878,-0.17129898,0.4058455,0.12438698,1.1436486,0.19364387,1.1436486,"up","VASP",7408,"0001843 // neural tube closure // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0008154 // actin polymerization or depolymerization // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051289 // protein homotetramerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0031258 // lamellipodium membrane // inferred from electronic annotation /// 0031527 // filopodium membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005522 // profilin binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation","chr19:46010694-46030241 (+) // 89.99 // q13.32"]
["11741280_s_at",9.619821,7.493168,7.9089227,8.795002,7.148886,8.600974,0.22201943,-0.13841486,-0.060509443,0.09269333,-0.20627213,0.060509443,0.9536452,0.8693337,1.0177535,0.025388157,1.0177535,"up","CASC1",55259,"","0005881 // cytoplasmic microtubule // inferred from electronic annotation","0008017 // microtubule binding // inferred from electronic annotation /// 0048487 // beta-tubulin binding // inferred from electronic annotation","chr12:25261223-25348094 (-) // 99.41 // p12.1"]
["11757313_s_at",363.38953,306.11902,284.05026,351.94907,286.0563,269.00662,0.29632092,0.04889679,-0.059049606,0.2501707,-0.04889679,-0.13755417,0.86328954,0.6624126,1.0527402,0.07414947,1.0527402,"up","VAT1",10493,"0010637 // negative regulation of mitochondrial fusion // inferred from mutant phenotype /// 0016049 // cell growth // non-traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation","chr17:41166623-41167974 (-) // 92.54 // q21.31"]
["11727264_at",67.63674,56.89029,62.83618,63.266373,58.05912,51.72123,0.16324806,-0.08637667,0.0570364,0.066880226,-0.0570364,-0.22380257,0.6676004,0.35520324,1.0836926,0.11595551,1.0836926,"up","LRRC8E",80131,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr19:7953389-7966901 (+) // 85.61 // p13.2"]
["11751320_a_at",87.438034,88.76128,86.905075,81.8967,80.82317,87.78541,0.0044107437,0.026079655,-0.004410267,-0.09004593,-0.109081745,0.010130882,0.4193436,0.13278577,1.0509487,0.0716923,1.0509487,"up","POLL",27343,"0006260 // DNA replication // non-traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006289 // nucleotide-excision repair // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0016446 // somatic hypermutation of immunoglobulin genes // non-traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003887 // DNA-directed DNA polymerase activity // inferred from electronic annotation /// 0003887 // DNA-directed DNA polymerase activity // non-traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:103338990-103348006 (-) // 99.86 // q24.32"]
["11722091_a_at",125.840996,128.64629,121.125725,143.26935,120.27364,113.62477,0.027548313,0.059356213,-0.027548313,0.21467638,-0.037733078,-0.11977625,0.99784994,0.99472696,1.0005059,0.0007297098,1.0005059,"up","PRR5",55615,"0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0030036 // actin cytoskeleton organization // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0032321 // positive regulation of Rho GTPase activity // inferred from direct assay /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from direct assay /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // inferred from direct assay /// 0005100 // Rho GTPase activator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr22:45072687-45133561 (+) // 97.79 // q13.31"]
["11718474_a_at",1383.3893,1361.8357,1336.0564,1273.1217,1123.5155,1115.3099,0.08503151,0.062376976,0.034805298,-0.034805298,-0.2151556,-0.2257309,0.18580522,0.026142467,1.16417,0.21930178,1.16417,"up","IDH1",3417,"0006097 // glyoxylate cycle // inferred from electronic annotation /// 0006099 // tricarboxylic acid cycle // inferred from electronic annotation /// 0006102 // isocitrate metabolic process // inferred from direct assay /// 0006102 // isocitrate metabolic process // inferred from electronic annotation /// 0006103 // 2-oxoglutarate metabolic process // inferred from direct assay /// 0006103 // 2-oxoglutarate metabolic process // traceable author statement /// 0006740 // NADPH regeneration // traceable author statement /// 0006749 // glutathione metabolic process // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation /// 0005782 // peroxisomal matrix // traceable author statement /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0000287 // magnesium ion binding // inferred from direct assay /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004450 // isocitrate dehydrogenase (NADP+) activity // not recorded /// 0004450 // isocitrate dehydrogenase (NADP+) activity // inferred from direct assay /// 0004450 // isocitrate dehydrogenase (NADP+) activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation","chr2:209100952-209120522 (-) // 92.68 // q34"]
["11745815_x_at",462.4991,386.66138,338.5323,396.4798,314.75223,347.07327,0.33629513,0.07791519,-0.11386204,0.11409187,-0.21893883,-0.07791519,0.6844947,0.37711993,1.1180904,0.16103682,1.1180904,"up","C16orf5",29965,"0006915 // apoptotic process // inferred from genetic interaction /// 0006917 // induction of apoptosis // inferred from direct assay /// 0033209 // tumor necrosis factor-mediated signaling pathway // inferred from genetic interaction /// 0042771 // DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement","","chr16:4560706-4565107 (-) // 95.22 // p13.3"]
["11717432_a_at",685.38947,697.9369,712.2101,803.11975,842.3895,780.95807,-0.121850014,-0.095677376,-0.0664711,0.10684109,0.17571354,0.0664711,0.0764652,0.0040924437,-1.1574967,-0.21100807,1.1574967,"down","ECHDC1",55862,"0008152 // metabolic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004492 // methylmalonyl-CoA decarboxylase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from sequence or structural similarity /// 0016831 // carboxy-lyase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation","chr6:127609856-127665037 (-) // 98.5 // q22.33"]
["11720731_a_at",519.6837,533.0343,519.6126,572.217,545.44055,498.3313,-0.018297195,0.018297195,-0.018494606,0.12063122,0.051490784,-0.07882595,0.8113348,0.56658953,-1.0261656,-0.037263576,1.0261656,"down","SUMF1",285362,"0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation","0016491 // oxidoreductase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:4402829-4508954 (-) // 90.13 // p26.1"]
["11741989_a_at",29.869326,35.13758,35.0916,31.578802,35.150997,35.58789,-0.23340559,0.0009446144,-0.0009446144,-0.15311384,0.0014953613,0.019316196,0.90097314,0.7410433,-1.0236348,-0.03370109,1.0236348,"down","P2RX2",22953,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // not recorded /// 0010524 // positive regulation of calcium ion transport into cytosol // non-traceable author statement /// 0035590 // purinergic nucleotide receptor signaling pathway // not recorded /// 0035590 // purinergic nucleotide receptor signaling pathway // non-traceable author statement /// 0050850 // positive regulation of calcium-mediated signaling // non-traceable author statement /// 0051260 // protein homooligomerization // inferred from physical interaction","0016020 // membrane // not recorded /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0001614 // purinergic nucleotide receptor activity // not recorded /// 0001614 // purinergic nucleotide receptor activity // non-traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004931 // extracellular ATP-gated cation channel activity // not recorded /// 0004931 // extracellular ATP-gated cation channel activity // non-traceable author statement /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0015276 // ligand-gated ion channel activity // traceable author statement /// 0042802 // identical protein binding // inferred from physical interaction","chr12:133195402-133198972 (+) // 96.32 // q24.33"]
["11741321_a_at",73.66881,60.229042,72.00341,82.246,70.09024,59.129105,0.052414894,-0.23817968,0.019425869,0.21130657,-0.019425392,-0.2647705,0.94937676,0.8597225,-1.0218263,-0.031149928,1.0218263,"down","CREM",1390,"0006006 // glucose metabolic process // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006687 // glycosphingolipid metabolic process // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042752 // regulation of circadian rhythm // inferred from electronic annotation /// 0048384 // retinoic acid receptor signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008140 // cAMP response element binding protein binding // non-traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr10:35484829-35501885 (+) // 99.52 // p11.21"]
["11753889_a_at",129.00822,155.44589,132.38899,139.87877,141.37175,163.31596,-0.12437248,0.14457655,-0.087052345,-0.0076580048,0.0076584816,0.2158308,0.73322827,0.44292197,-1.067493,-0.094226554,1.067493,"down","STAT6",6778,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0002296 // T-helper 1 cell lineage commitment // inferred from electronic annotation /// 0002829 // negative regulation of type 2 immune response // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048295 // positive regulation of isotype switching to IgE isotypes // inferred from electronic annotation","0000790 // nuclear chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr12:57501945-57502061 (-) // 99.15 // q13.3"]
["11735141_at",11.0192,12.640927,11.666619,9.903646,10.249782,11.8498745,-0.04118371,0.15689945,0.04118371,-0.19517136,-0.14560986,0.06366873,0.52858,0.21370025,1.1054783,0.14467068,1.1054783,"up","SORCS3",22986,"0007218 // neuropeptide signaling pathway // non-traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0008188 // neuropeptide receptor activity // non-traceable author statement","chr10:106400858-107024999 (+) // 99.71 // q25.1"]
["11756090_s_at",357.42383,390.4429,399.23285,338.78748,446.92215,369.22284,-0.08716583,0.040309906,0.0724287,-0.16442108,0.23522186,-0.040309906,0.99626577,0.9903763,-1.001137,-0.0016394387,1.001137,"down","ZHX1",11244,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from direct assay","chr14:63763014-63764134 (+) // 49.18 // q23.2"]
["11740919_a_at",29.484495,36.68689,28.629023,33.30123,30.471922,31.82063,-0.078764915,0.23654318,-0.121243,0.09685421,-0.03124094,0.03124094,0.95531183,0.87377137,-1.0140342,-0.020106241,1.0140342,"down","RSPO1",284654,"0002090 // regulation of receptor internalization // inferred from direct assay /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from direct assay /// 0050896 // response to stimulus // inferred from electronic annotation /// 0060070 // canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation","chr1:38076950-38100491 (-) // 84.99 // p34.3"]
["11730501_a_at",74.66127,76.55619,70.65143,72.919334,58.403362,56.89027,0.056850433,0.09300947,-0.022791386,0.022791862,-0.29745865,-0.33532763,0.37681141,0.107098155,1.1856577,0.2456876,1.1856577,"up","CACNA2D3",55799,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005245 // voltage-gated calcium channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:54156650-55108582 (+) // 97.56 // p21.1"]
["11743248_at",33.232357,34.224796,44.732635,30.864151,42.869915,41.13745,-0.1751585,-0.13270521,0.25358057,-0.28181505,0.1922183,0.13270521,0.9579321,0.8801456,-1.0227573,-0.032463823,1.0227573,"down","ONECUT3",390874,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0031018 // endocrine pancreas development // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr19:1753661-1775602 (+) // 63.32 // p13.3"]
["11761537_at",14.874258,18.242638,15.734651,16.839647,17.580786,21.095234,-0.21011305,0.08438349,-0.12898564,-0.031068802,0.031068802,0.29398632,0.55939573,0.24050169,-1.1351638,-0.18290046,1.1351638,"down","TM2D3",80213,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr15:102173275-102192579 (-) // 53.12 // q26.3"]
["11745685_a_at",48.397076,44.709473,42.989315,59.32088,39.662163,31.618448,0.14264059,0.028301239,-0.028301239,0.43626118,-0.14451599,-0.4715128,0.8865961,0.7110972,1.0773368,0.10746932,1.0773368,"up","SCLT1",132320,"0045162 // clustering of voltage-gated sodium channels // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0017080 // sodium channel regulator activity // inferred from electronic annotation","chr4:129805500-130014567 (-) // 99.93 // q28.2"]
["11764008_at",15.5726185,16.311674,19.850452,19.735903,20.433836,22.23542,-0.34598565,-0.2790923,0.0041747093,-0.0041747093,0.04596281,0.16786242,0.3256353,0.080320045,-1.2115477,-0.27685124,1.2115477,"down","","","","","","chr9:121450030-121468238 (-) // 43.26 // q33.1"]
["11731749_at",69.722885,69.905365,58.197163,60.815807,70.89332,87.15381,-0.0018854141,0.0018854141,-0.26256895,-0.1990714,0.02213192,0.32004547,0.7586427,0.48050502,-1.0982641,-0.13522501,1.0982641,"down","SNX32",254122,"0006810 // transport // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","","0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr11:65601409-65621172 (+) // 95.15 // q13.1"]
["11719543_a_at",59.736443,58.144924,55.64038,64.72292,73.660866,64.86993,-0.05783224,-0.09679079,-0.16031218,0.057832718,0.24445438,0.06110573,0.19840847,0.029936217,-1.1696763,-0.22610933,1.1696763,"down","C3orf18",51161,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:50595461-50605199 (-) // 95.98 // p21.31"]
["11756854_a_at",191.38959,166.3253,176.66283,156.05627,159.63963,175.19548,0.16502523,-0.0374794,0.049511433,-0.12942076,-0.09666824,0.037478924,0.50138795,0.19207267,1.0881588,0.121889174,1.0881588,"up","EHBP1",23301,"","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","","chr2:63192096-63272798 (+) // 100.0 // p15"]
["11749575_at",35.27827,40.03063,43.855797,32.27958,43.673916,49.99811,-0.2451582,-0.062833786,0.06882954,-0.3733163,0.062833786,0.25793552,0.91669714,0.77940136,-1.0440603,-0.062205106,1.0440603,"down","LOC100287329",100287329,"","","","chr6:31527069-31540480 (-) // 96.53 // p21.33"]
["11717457_a_at",396.83954,335.8764,364.5121,390.76334,318.69434,295.6041,0.18160725,-0.059018135,0.059018135,0.15934658,-0.13477516,-0.24328232,0.6959772,0.39109707,1.0969056,0.13343936,1.0969056,"up","NLGN2",57555,"0007155 // cell adhesion // inferred from electronic annotation /// 0007158 // neuron cell-cell adhesion // inferred from sequence or structural similarity /// 0007416 // synapse assembly // not recorded /// 0007416 // synapse assembly // inferred from sequence or structural similarity /// 0007416 // synapse assembly // non-traceable author statement /// 0016337 // cell-cell adhesion // non-traceable author statement /// 0032230 // positive regulation of synaptic transmission, GABAergic // inferred from sequence or structural similarity /// 0035418 // protein localization to synapse // inferred from sequence or structural similarity /// 0045217 // cell-cell junction maintenance // non-traceable author statement /// 0051965 // positive regulation of synapse assembly // inferred from sequence or structural similarity /// 0051968 // positive regulation of synaptic transmission, glutamatergic // inferred from sequence or structural similarity /// 0072553 // terminal button organization // inferred from sequence or structural similarity /// 0097104 // postsynaptic membrane assembly // inferred from sequence or structural similarity /// 0097105 // presynaptic membrane assembly // inferred from sequence or structural similarity /// 0097116 // gephyrin clustering // inferred from sequence or structural similarity /// 0097119 // postsynaptic density protein 95 clustering // inferred from sequence or structural similarity /// 0097151 // positive regulation of inhibitory postsynaptic membrane potential // inferred from sequence or structural similarity /// 2000311 // regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity // inferred from sequence or structural similarity /// 2000463 // positive regulation of excitatory postsynaptic membrane potential // inferred from sequence or structural similarity","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // not recorded /// 0005887 // integral to plasma membrane // inferred from sequence or structural similarity /// 0009986 // cell surface // not recorded /// 0009986 // cell surface // inferred from sequence or structural similarity /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0045202 // synapse // not recorded /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // non-traceable author statement /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0060077 // inhibitory synapse // inferred from sequence or structural similarity","0004091 // carboxylesterase activity // not recorded /// 0004872 // receptor activity // not recorded /// 0042043 // neurexin family protein binding // not recorded /// 0042043 // neurexin family protein binding // inferred from sequence or structural similarity /// 0042043 // neurexin family protein binding // non-traceable author statement /// 0050839 // cell adhesion molecule binding // inferred from sequence or structural similarity","chr17:7311501-7323179 (+) // 94.41 // p13.1"]
["11735338_at",72.92995,62.270374,59.64263,78.83264,68.17254,77.22293,0.04866028,-0.1793046,-0.24150705,0.16094208,-0.048660755,0.13117838,0.42269027,0.13513057,-1.1528491,-0.20520365,1.1528491,"down","LINC00482",284185,"","","","chr17:79276623-79283053 (-) // 77.12 // q25.3"]
["11716992_at",212.3576,178.72887,176.74776,196.97192,185.80571,185.80571,0.19270134,-0.056021214,-0.07210255,0.08419514,0,0,0.98111683,0.9456818,-1.004543,-0.006539244,1.004543,"down","CIC",23152,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr19:42788816-42799948 (+) // 95.51 // q13.2"]
["11738637_a_at",1183.8154,822.876,772.3087,1234.5411,873.26,849.889,0.45852947,-0.06616783,-0.15766525,0.51906013,0.019568443,-0.019568443,0.8964996,0.7326087,-1.0679084,-0.09478791,1.0679084,"down","CTBP1",1487,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0019079 // viral genome replication // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031065 // positive regulation of histone deacetylation // inferred from mutant phenotype /// 0034401 // regulation of transcription by chromatin organization // inferred from mutant phenotype /// 0035067 // negative regulation of histone acetylation // inferred from mutant phenotype /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0050872 // white fat cell differentiation // inferred from sequence or structural similarity /// 0050872 // white fat cell differentiation // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0090241 // negative regulation of histone H4 acetylation // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from direct assay /// 0017053 // transcriptional repressor complex // inferred from sequence or structural similarity /// 0017053 // transcriptional repressor complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0001106 // RNA polymerase II transcription corepressor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // traceable author statement /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0048037 // cofactor binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from sequence or structural similarity /// 0051287 // NAD binding // inferred from electronic annotation","chr4:1205232-1242914 (-) // 90.98 // p16.3"]
["11720930_s_at",346.81915,257.4469,253.10489,267.07373,225.60155,244.0222,0.44217873,0.012269974,-0.012269497,0.06523323,-0.1782279,-0.06499243,0.5947461,0.27468017,1.1540631,0.20672211,1.1540631,"up","DLST",1743,"0006091 // generation of precursor metabolites and energy // traceable author statement /// 0006099 // tricarboxylic acid cycle // traceable author statement /// 0006099 // tricarboxylic acid cycle // inferred from electronic annotation /// 0006103 // 2-oxoglutarate metabolic process // inferred from electronic annotation /// 0006554 // lysine catabolic process // traceable author statement /// 0006734 // NADH metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0033512 // L-lysine catabolic process to acetyl-CoA via saccharopine // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005792 // microsome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045252 // oxoglutarate dehydrogenase complex // inferred from electronic annotation","0004149 // dihydrolipoyllysine-residue succinyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0031072 // heat shock protein binding // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from electronic annotation","chr14:75348595-75370443 (+) // 98.64 // q24.3"]
["11723309_at",79.073395,97.055466,80.845856,76.90617,82.77627,91.487785,-0.049003124,0.24661398,-0.017021656,-0.08909607,0.017021656,0.16138363,0.929645,0.8100251,1.0213141,0.03042669,1.0213141,"up","TNFRSF10D",8793,"0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0007165 // signal transduction // traceable author statement","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0045569 // TRAIL binding // inferred from electronic annotation","chr8:22993100-23021543 (-) // 89.17 // p21.3"]
["11733872_x_at",2245.2388,2326.7832,2457.89,2713.392,2799.5557,2722.3574,-0.20188999,-0.1504221,-0.07133865,0.07133865,0.116438866,0.07609749,0.082122035,0.0048386087,-1.1721647,-0.22917527,1.1721647,"down","LOC100652805 /// LOC100653302 /// PGK1","100652805 /// 100653302 /// 5230","0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006096 // glycolysis // inferred from electronic annotation /// 0006096 // glycolysis // traceable author statement /// 0016310 // phosphorylation // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004618 // phosphoglycerate kinase activity // not recorded /// 0004618 // phosphoglycerate kinase activity // inferred from sequence or structural similarity /// 0004618 // phosphoglycerate kinase activity // inferred from electronic annotation /// 0004618 // phosphoglycerate kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chrX:77359665-77382323 (+) // 82.0 // q21.1"]
["11752991_at",8.984121,10.063882,9.7686205,8.616428,10.3935,11.457398,-0.14225769,0.021480083,-0.021480083,-0.20254517,0.06797457,0.20857263,0.8349092,0.6093426,-1.051236,-0.07208663,1.051236,"down","HSP90B3P",343477,"0006457 // protein folding // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation","","0005524 // ATP binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr1:92100567-92109335 (+) // 94.13 // p22.1"]
["11758326_s_at",177.14848,168.2437,164.6534,234.4518,200.79141,196.20644,-0.07370663,-0.14811277,-0.17923307,0.330626,0.1070323,0.07370663,0.18042208,0.024558136,-1.2346817,-0.3041392,1.2346817,"down","THEM4",117145,"0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","","chr1:151849535-151881964 (-) // 98.49 // q21.3 /// chr15:55734929-55735594 (-) // 94.86 // q21.3"]
["11724297_a_at",28.14613,27.639235,28.640985,25.364775,29.563047,29.9304,-0.0125722885,-0.03879118,0.0125722885,-0.16268253,0.05828619,0.07610273,0.9886276,0.96646106,-1.0024284,-0.0034992115,1.0024284,"down","BMP7",655,"0001501 // skeletal system development // traceable author statement /// 0001503 // ossification // inferred from electronic annotation /// 0001654 // eye development // inferred from electronic annotation /// 0001656 // metanephros development // inferred from expression pattern /// 0001657 // ureteric bud development // inferred from sequence or structural similarity /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0001707 // mesoderm formation // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001823 // mesonephros development // inferred from expression pattern /// 0001837 // epithelial to mesenchymal transition // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0007411 // axon guidance // inferred from electronic annotation /// 0007435 // salivary gland morphogenesis // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009880 // embryonic pattern specification // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010664 // negative regulation of striated muscle cell apoptotic process // inferred from sequence or structural similarity /// 0010800 // positive regulation of peptidyl-threonine phosphorylation // inferred from direct assay /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0010862 // positive regulation of pathway-restricted SMAD protein phosphorylation // traceable author statement /// 0010942 // positive regulation of cell death // inferred from electronic annotation /// 0016358 // dendrite development // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030501 // positive regulation of bone mineralization // inferred from direct assay /// 0030509 // BMP signaling pathway // inferred from direct assay /// 0030509 // BMP signaling pathway // inferred from electronic annotation /// 0030855 // epithelial cell differentiation // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from sequence or structural similarity /// 0034116 // positive regulation of heterotypic cell-cell adhesion // inferred from direct assay /// 0034504 // protein localization to nucleus // inferred from direct assay /// 0035239 // tube morphogenesis // inferred from electronic annotation /// 0040007 // growth // inferred from electronic annotation /// 0042326 // negative regulation of phosphorylation // inferred from direct assay /// 0042347 // negative regulation of NF-kappaB import into nucleus // inferred from sequence or structural similarity /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // inferred from mutant phenotype /// 0043407 // negative regulation of MAP kinase activity // inferred from direct assay /// 0045597 // positive regulation of cell differentiation // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from direct assay /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // inferred from direct assay /// 0045746 // negative regulation of Notch signaling pathway // inferred from electronic annotation /// 0045786 // negative regulation of cell cycle // inferred from direct assay /// 0045839 // negative regulation of mitosis // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0048468 // cell development // inferred from electronic annotation /// 0048593 // camera-type eye morphogenesis // inferred from electronic annotation /// 0048596 // embryonic camera-type eye morphogenesis // inferred from electronic annotation /// 0048646 // anatomical structure formation involved in morphogenesis // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from electronic annotation /// 0048762 // mesenchymal cell differentiation // inferred from direct assay /// 0048812 // neuron projection morphogenesis // inferred from direct assay /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0050768 // negative regulation of neurogenesis // inferred from electronic annotation /// 0051216 // cartilage development // inferred from electronic annotation /// 0060272 // embryonic skeletal joint morphogenesis // inferred from electronic annotation /// 0060389 // pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0060395 // SMAD protein signal transduction // inferred from direct assay /// 0060445 // branching involved in salivary gland morphogenesis // inferred from electronic annotation /// 0060485 // mesenchyme development // inferred from sequence or structural similarity /// 0060485 // mesenchyme development // inferred from electronic annotation /// 0060548 // negative regulation of cell death // inferred from direct assay /// 0060686 // negative regulation of prostatic bud formation // inferred from electronic annotation /// 0060687 // regulation of branching involved in prostate gland morphogenesis // inferred from electronic annotation /// 0070487 // monocyte aggregation // inferred from direct assay /// 0071456 // cellular response to hypoxia // inferred from sequence or structural similarity /// 0072040 // negative regulation of mesenchymal stem cell apoptotic process involved in nephron morphogenesis // inferred from electronic annotation /// 0072125 // negative regulation of glomerular mesangial cell proliferation // inferred from direct assay /// 0072133 // metanephric mesenchyme morphogenesis // inferred from electronic annotation /// 0072134 // nephrogenic mesenchyme morphogenesis // inferred from electronic annotation /// 0072136 // metanephric mesenchymal cell proliferation involved in metanephros development // inferred from electronic annotation /// 1900006 // positive regulation of dendrite development // inferred from direct assay /// 1900106 // positive regulation of hyaluranon cable assembly // inferred from direct assay /// 2000121 // regulation of removal of superoxide radicals // inferred from sequence or structural similarity","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation","chr20:55743808-55841708 (-) // 89.56 // q13.31"]
["11721212_a_at",9.687486,8.475714,9.195922,8.35169,9.746149,9.397594,0.059479475,-0.13330793,-0.015648842,-0.15457463,0.06818938,0.015648603,0.9815447,0.94655126,-1.0043395,-0.0062469677,1.0043395,"down","THBS4",7060,"0001938 // positive regulation of endothelial cell proliferation // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from expression pattern /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0051451 // myoblast migration // inferred from direct assay /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0071603 // endothelial cell-cell adhesion // inferred from direct assay /// 0090023 // positive regulation of neutrophil chemotaxis // inferred from direct assay","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from direct assay /// 0005615 // extracellular space // inferred from direct assay /// 0031594 // neuromuscular junction // inferred from electronic annotation","0001968 // fibronectin binding // inferred from electronic annotation /// 0005178 // integrin binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005518 // collagen binding // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation /// 0008201 // heparin binding // inferred from direct assay /// 0043237 // laminin-1 binding // inferred from electronic annotation","chr5:79330990-79379110 (+) // 98.43 // q14.1"]
["11735472_a_at",13.077094,15.167893,14.742928,15.275341,13.778748,14.248392,-0.14836931,0.065609455,0.02461195,0.07579374,-0.0729661,-0.02461195,0.9596344,0.88528436,-1.0084372,-0.012121181,1.0084372,"down","CCDC169 /// CCDC169-SOHLH2 /// SOHLH2","100526761 /// 54937 /// 728591","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0048477 // oogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr13:36804911-36871992 (-) // 100.0 // q13.3"]
["11715686_s_at",2346.6738,2522.5562,2572.3765,2008.1497,2122.4624,2308.7854,0.011741638,0.116010666,0.14422607,-0.21300888,-0.13313675,-0.011741638,0.23474918,0.04174586,1.1566523,0.20995528,1.1566523,"up","ARPC5",10092,"0006928 // cellular component movement // traceable author statement /// 0030036 // actin cytoskeleton organization // traceable author statement /// 0030833 // regulation of actin filament polymerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005885 // Arp2/3 protein complex // traceable author statement /// 0015629 // actin cytoskeleton // traceable author statement /// 0042995 // cell projection // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr1:183595327-183605076 (-) // 91.38 // q25.3"]
["11753825_x_at",271.65833,266.40845,247.55623,222.18396,223.3749,259.88962,0.098965645,0.070812225,-0.035071373,-0.19107294,-0.18336058,0.035071373,0.42282403,0.13522322,1.115757,0.15802284,1.115757,"up","FKBP1A",2280,"0000413 // protein peptidyl-prolyl isomerization // inferred from direct assay /// 0000413 // protein peptidyl-prolyl isomerization // traceable author statement /// 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0003007 // heart morphogenesis // inferred from sequence or structural similarity /// 0006457 // protein folding // inferred from electronic annotation /// 0006457 // protein folding // non-traceable author statement /// 0006458 // 'de novo' protein folding // traceable author statement /// 0007165 // signal transduction // inferred from mutant phenotype /// 0007183 // SMAD protein complex assembly // inferred from direct assay /// 0018208 // peptidyl-proline modification // not recorded /// 0022417 // protein maturation by protein folding // traceable author statement /// 0031398 // positive regulation of protein ubiquitination // inferred from direct assay /// 0032092 // positive regulation of protein binding // inferred from direct assay /// 0032513 // negative regulation of protein phosphatase type 2B activity // inferred from direct assay /// 0032925 // regulation of activin receptor signaling pathway // inferred from direct assay /// 0034205 // beta-amyloid formation // inferred from direct assay /// 0042026 // protein refolding // traceable author statement /// 0042110 // T cell activation // non-traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype /// 0043206 // fibril organization // inferred from direct assay /// 0050776 // regulation of immune response // inferred from mutant phenotype /// 0055010 // ventricular cardiac muscle tissue morphogenesis // inferred from sequence or structural similarity /// 0060314 // regulation of ryanodine-sensitive calcium-release channel activity // inferred from direct assay /// 0060314 // regulation of ryanodine-sensitive calcium-release channel activity // inferred from sequence or structural similarity /// 0060347 // heart trabecula formation // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0014802 // terminal cisterna // inferred from sequence or structural similarity /// 0030424 // axon // not recorded /// 0033017 // sarcoplasmic reticulum membrane // not recorded","0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from direct assay /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // traceable author statement /// 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005024 // transforming growth factor beta-activated receptor activity // traceable author statement /// 0005160 // transforming growth factor beta receptor binding // inferred from sequence or structural similarity /// 0005219 // ryanodine-sensitive calcium-release channel activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005527 // macrolide binding // non-traceable author statement /// 0005528 // FK506 binding // inferred from direct assay /// 0005528 // FK506 binding // non-traceable author statement /// 0016853 // isomerase activity // inferred from electronic annotation /// 0034713 // type I transforming growth factor beta receptor binding // inferred from sequence or structural similarity /// 0046332 // SMAD binding // inferred from physical interaction /// 0048185 // activin binding // inferred from physical interaction","chr6:63921461-63921788 (+) // 99.28 // q12 /// chr20:1352755-1373642 (-) // 100.0 // p13"]
["11728376_s_at",12.8616495,14.14999,14.067471,11.725967,14.672942,14.365187,-0.1335063,0.004219055,-0.004219055,-0.26687503,0.056576252,0.025995016,0.9603345,0.88746786,1.0118059,0.016932545,1.0118059,"up","NMU",10874,"0001696 // gastric acid secretion // inferred from electronic annotation /// 0006940 // regulation of smooth muscle contraction // traceable author statement /// 0006940 // regulation of smooth muscle contraction // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007586 // digestion // traceable author statement /// 0009648 // photoperiodism // inferred from electronic annotation /// 0019233 // sensory perception of pain // inferred from electronic annotation /// 0042755 // eating behavior // inferred from electronic annotation /// 0045987 // positive regulation of smooth muscle contraction // inferred from electronic annotation /// 0046887 // positive regulation of hormone secretion // inferred from electronic annotation /// 0050806 // positive regulation of synaptic transmission // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0043195 // terminal button // inferred from electronic annotation","0005102 // receptor binding // traceable author statement /// 0042922 // neuromedin U receptor binding // inferred from electronic annotation","chr4:56461397-56502465 (-) // 93.62 // q12"]
["11717341_at",371.98425,351.47894,321.5564,448.11462,396.463,383.8445,-0.022640228,-0.10444355,-0.23281002,0.24598598,0.069304466,0.022640228,0.29056007,0.06378694,-1.1749572,-0.23260815,1.1749572,"down","PTGFRN",5738,"0034389 // lipid particle organization // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:117452572-117532975 (+) // 96.47 // p13.1"]
["11759881_at",18.78998,21.718565,20.115417,18.525677,23.318693,21.432554,-0.14408922,0.06487608,-0.045751095,-0.16452646,0.16743422,0.045751095,0.8511914,0.63900095,-1.040931,-0.05787442,1.040931,"down","PPIA",5478,"0000413 // protein peptidyl-prolyl isomerization // inferred from direct assay /// 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0002576 // platelet degranulation // traceable author statement /// 0006278 // RNA-dependent DNA replication // traceable author statement /// 0006457 // protein folding // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0019047 // provirus integration // traceable author statement /// 0019059 // initiation of viral infection // traceable author statement /// 0019061 // uncoating of virus // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030260 // entry into host cell // traceable author statement /// 0045069 // regulation of viral genome replication // inferred from mutant phenotype /// 0045069 // regulation of viral genome replication // traceable author statement /// 0050900 // leukocyte migration // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement","0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from direct assay /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016853 // isomerase activity // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation /// 0046790 // virion binding // non-traceable author statement /// 0051082 // unfolded protein binding // traceable author statement","chr11:3913430-3914122 (-) // 75.66 // p15.4"]
["11735609_a_at",7.494877,8.366697,11.473288,7.581611,8.229892,8.028327,-0.11708164,0.041671753,0.49722052,-0.10048175,0.017886877,-0.017887115,0.70632046,0.4054909,1.1282585,0.1740976,1.1282585,"up","FER1L5",90342,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:97308573-97370624 (+) // 99.98 // q11.2"]
["11734876_a_at",25.440002,25.95297,27.022892,22.151459,29.326775,26.237991,-0.036679745,-0.00787878,0.050403595,-0.23637676,0.16843987,0.00787878,0.9511899,0.86414903,1.0153434,0.021967784,1.0153434,"up","TMEM30B",161291,"0070863 // positive regulation of protein exit from endoplasmic reticulum // inferred from direct assay","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr14:61744087-61748558 (-) // 92.78 // q23.1"]
["11721891_at",44.280914,49.501007,50.58644,42.586716,50.79839,54.6481,-0.17641926,-0.015646458,0.015646458,-0.23270082,0.021678448,0.12706709,0.93107504,0.8133594,-1.0215936,-0.03082135,1.0215936,"down","LPHN1",22859,"0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0015643 // toxin binding // inferred from electronic annotation /// 0016524 // latrotoxin receptor activity // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr19:14258548-14316999 (-) // 97.96 // p13.12"]
["11731997_at",79.854805,102.7403,100.722855,120.716705,100.88951,114.420784,-0.35043812,0.013113022,-0.015498161,0.24573612,-0.013113022,0.16846037,0.44034865,0.14635497,-1.190281,-0.25130224,1.190281,"down","TRIM58",25893,"","0005622 // intracellular // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:248020471-248042611 (+) // 61.22 // q44"]
["11725741_x_at",29.956667,32.776367,30.243393,21.901035,32.711746,33.451294,-0.070337296,0.059441566,-0.05659437,-0.52221537,0.05659437,0.08884764,0.850469,0.6378819,1.0740747,0.10309439,1.0740747,"up","SMPDL3B",27293,"0006685 // sphingomyelin catabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0004767 // sphingomyelin phosphodiesterase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation","chr1:28261466-28285663 (+) // 94.1 // p35.3"]
["11751294_a_at",7.259753,8.433102,9.155341,6.7459087,7.1749935,7.501449,-0.02362442,0.19251847,0.31106853,-0.1295321,-0.040567398,0.02362442,0.40564016,0.124209076,1.1557366,0.2088126,1.1557366,"up","ST6GALNAC5",81849,"0006486 // protein glycosylation // inferred from electronic annotation /// 0006688 // glycosphingolipid biosynthetic process // inferred from sequence or structural similarity /// 0006688 // glycosphingolipid biosynthetic process // inferred from electronic annotation /// 0009312 // oligosaccharide biosynthetic process // inferred from sequence or structural similarity /// 0009312 // oligosaccharide biosynthetic process // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030173 // integral to Golgi membrane // inferred from electronic annotation","0001665 // alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity // inferred from sequence or structural similarity /// 0001665 // alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity // inferred from electronic annotation /// 0008373 // sialyltransferase activity // inferred from sequence or structural similarity /// 0008373 // sialyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr1:77333170-77529522 (+) // 81.07 // p31.1"]
["11717275_s_at",1414.5238,1224.073,1232.8889,1530.077,1191.622,1113.0055,0.2034502,-0.005176544,0.005176544,0.31673813,-0.04393959,-0.14240551,0.95902634,0.88291407,1.0170231,0.02435243,1.0170231,"up","COL5A1",1289,"0001568 // blood vessel development // inferred from electronic annotation /// 0003007 // heart morphogenesis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from mutant phenotype /// 0007411 // axon guidance // traceable author statement /// 0016477 // cell migration // inferred from mutant phenotype /// 0030199 // collagen fibril organization // inferred from mutant phenotype /// 0030199 // collagen fibril organization // non-traceable author statement /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0032964 // collagen biosynthetic process // inferred from mutant phenotype /// 0035313 // wound healing, spreading of epidermal cells // inferred from mutant phenotype /// 0043206 // fibril organization // inferred from mutant phenotype /// 0043588 // skin development // inferred from mutant phenotype /// 0043588 // skin development // inferred from electronic annotation /// 0045112 // integrin biosynthetic process // inferred from mutant phenotype /// 0048592 // eye morphogenesis // inferred from mutant phenotype /// 0051128 // regulation of cellular component organization // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005588 // collagen type V // inferred from mutant phenotype /// 0005588 // collagen type V // traceable author statement /// 0005604 // basement membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from mutant phenotype /// 0031012 // extracellular matrix // inferred from electronic annotation","0005178 // integrin binding // non-traceable author statement /// 0005201 // extracellular matrix structural constituent // inferred from electronic annotation /// 0008201 // heparin binding // inferred from direct assay /// 0008201 // heparin binding // inferred from electronic annotation /// 0043394 // proteoglycan binding // inferred from physical interaction /// 0048407 // platelet-derived growth factor binding // inferred from direct assay","chr9:137533565-137736689 (+) // 98.38 // q34.3"]
["11739947_a_at",25.950003,22.108181,20.997166,22.37948,23.950708,25.05259,0.1646123,-0.06654215,-0.14092779,-0.048945904,0.048945904,0.11383724,0.8517697,0.64015967,-1.0368676,-0.05223171,1.0368676,"down","PFKFB2",5208,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006000 // fructose metabolic process // traceable author statement /// 0006000 // fructose metabolic process // inferred from electronic annotation /// 0006003 // fructose 2,6-bisphosphate metabolic process // inferred from electronic annotation /// 0006006 // glucose metabolic process // traceable author statement /// 0006007 // glucose catabolic process // inferred from electronic annotation /// 0006089 // lactate metabolic process // inferred from electronic annotation /// 0006090 // pyruvate metabolic process // inferred from electronic annotation /// 0006096 // glycolysis // inferred from direct assay /// 0006096 // glycolysis // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0033133 // positive regulation of glucokinase activity // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003873 // 6-phosphofructo-2-kinase activity // inferred from direct assay /// 0003873 // 6-phosphofructo-2-kinase activity // inferred from electronic annotation /// 0003873 // 6-phosphofructo-2-kinase activity // traceable author statement /// 0004331 // fructose-2,6-bisphosphate 2-phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019900 // kinase binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction","chr1:207226592-207254369 (+) // 99.21 // q32.2"]
["11752129_a_at",360.05634,363.18683,356.5731,337.05652,294.57727,310.60605,0.054628372,0.06711769,0.040603638,-0.040603638,-0.23494816,-0.1585083,0.1824602,0.025233565,1.1477458,0.19880322,1.1477458,"up","BIVM-ERCC5 /// ERCC5","100533467 /// 2073","0000718 // nucleotide-excision repair, DNA damage removal // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006283 // transcription-coupled nucleotide-excision repair // inferred from mutant phenotype /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // inferred from electronic annotation /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006295 // nucleotide-excision repair, DNA incision, 3'-to lesion // inferred from direct assay /// 0006295 // nucleotide-excision repair, DNA incision, 3'-to lesion // inferred from mutant phenotype /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0008340 // determination of adult lifespan // inferred from electronic annotation /// 0009411 // response to UV // inferred from direct assay /// 0009411 // response to UV // inferred from mutant phenotype /// 0009411 // response to UV // inferred from electronic annotation /// 0009650 // UV protection // inferred from genetic interaction /// 0009650 // UV protection // inferred from electronic annotation /// 0010225 // response to UV-C // inferred from mutant phenotype /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005675 // holo TFIIH complex // inferred from direct assay /// 0016591 // DNA-directed RNA polymerase II, holoenzyme // inferred from direct assay","0000405 // bubble DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from direct assay /// 0003697 // single-stranded DNA binding // inferred from direct assay /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // traceable author statement /// 0004520 // endodeoxyribonuclease activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction","chr13:103498396-103524611 (+) // 97.64 // q33.1"]
["11717129_s_at",1121.2771,1173.3206,1232.0969,1261.2689,1149.6187,1063.6534,-0.050733566,0.014720917,0.08523941,0.11899948,-0.014720917,-0.12684822,0.91794986,0.7828266,1.0167269,0.023932144,1.0167269,"up","SAR1A",56681,"0006184 // GTP catabolic process // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // non-traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016529 // sarcoplasmic reticulum // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // non-traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation","chr10:71909325-71930279 (-) // 84.52 // q22.1"]
["11740589_s_at",845.4069,915.82684,914.3721,896.1813,908.67316,918.88135,-0.10862541,0.0068035126,0.004509926,-0.02448082,-0.004509926,0.01160717,0.79405093,0.53700316,-1.018639,-0.026642814,1.018639,"down","RYK",6259,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007411 // axon guidance // inferred from sequence or structural similarity /// 0007411 // axon guidance // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0022038 // corpus callosum development // inferred from sequence or structural similarity /// 0022038 // corpus callosum development // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from sequence or structural similarity /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0031175 // neuron projection development // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from direct assay /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0048843 // negative regulation of axon extension involved in axon guidance // inferred from electronic annotation /// 0050919 // negative chemotaxis // inferred from electronic annotation /// 0071679 // commissural neuron axon guidance // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from direct assay /// 0005109 // frizzled binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017147 // Wnt-protein binding // inferred from electronic annotation /// 0042813 // Wnt-activated receptor activity // inferred from electronic annotation","chr3:133875977-133969586 (-) // 92.38 // q22.2"]
["11715690_x_at",828.58875,679.15027,669.0146,819.33,744.12445,721.93335,0.17695141,-0.10997391,-0.13166714,0.1607399,0.021839142,-0.021839142,0.79872453,0.54470766,-1.0534656,-0.07514321,1.0534656,"down","CD164",8763,"0006955 // immune response // traceable author statement /// 0007155 // cell adhesion // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007157 // heterophilic cell-cell adhesion // inferred from direct assay /// 0007162 // negative regulation of cell adhesion // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0007517 // muscle organ development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // non-traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0030097 // hemopoiesis // non-traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr6:109687716-109703978 (-) // 97.26 // q21"]
["11741555_s_at",866.0895,928.82526,954.9103,1098.2198,1025.8076,1020.94226,-0.18908119,-0.08819008,-0.04823208,0.1534977,0.055090904,0.04823208,0.17388633,0.022824699,-1.1440166,-0.19410801,1.1440166,"down","LIPA /// LOC100507575","100507575 /// 3988","0000902 // cell morphogenesis // inferred from electronic annotation /// 0001816 // cytokine production // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0016125 // sterol metabolic process // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0048771 // tissue remodeling // inferred from electronic annotation /// 0048873 // homeostasis of number of cells within a tissue // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation /// 0005764 // lysosome // traceable author statement","0004771 // sterol esterase activity // inferred from direct assay /// 0004771 // sterol esterase activity // inferred from electronic annotation /// 0016298 // lipase activity // inferred from direct assay /// 0016298 // lipase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation","chr10:90973327-91011660 (-) // 97.23 // q23.31"]
["11758631_s_at",16.307264,15.915366,18.578503,13.041181,14.112804,15.238778,0.066431046,0.031336546,0.25455046,-0.25600934,-0.14207911,-0.031336546,0.2608857,0.05162052,1.1979611,0.26058105,1.1979611,"up","FOXO4",4303,"0000080 // G1 phase of mitotic cell cycle // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007095 // mitotic cell cycle G2/M transition DNA damage checkpoint // not recorded /// 0007095 // mitotic cell cycle G2/M transition DNA damage checkpoint // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007389 // pattern specification process // not recorded /// 0007517 // muscle organ development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009790 // embryo development // not recorded /// 0009888 // tissue development // not recorded /// 0016525 // negative regulation of angiogenesis // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // not recorded /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048513 // organ development // not recorded /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // not recorded /// 0051151 // negative regulation of smooth muscle cell differentiation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // not recorded /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008301 // DNA binding, bending // not recorded /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // not recorded /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chrX:70321367-70323384 (+) // 98.84 // q13.1"]
["11744193_x_at",2491.5063,2416.654,2494.4792,2031.9785,2211.8198,2163.471,0.10789585,0.06388855,0.10961628,-0.18623734,-0.06388855,-0.09577465,0.09232898,0.006158351,1.1559671,0.20910035,1.1559671,"up","SUMO1",7341,"0006281 // DNA repair // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016925 // protein sumoylation // inferred from direct assay /// 0016925 // protein sumoylation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0031334 // positive regulation of protein complex assembly // inferred from direct assay /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0032880 // regulation of protein localization // traceable author statement /// 0043392 // negative regulation of DNA binding // inferred from mutant phenotype /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0060021 // palate development // inferred from sequence or structural similarity /// 0060021 // palate development // inferred from electronic annotation /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060334 // regulation of interferon-gamma-mediated signaling pathway // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005643 // nuclear pore // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016604 // nuclear body // inferred from electronic annotation /// 0016605 // PML body // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0019789 // SUMO ligase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr2:203070904-203103322 (-) // 91.91 // q33.1"]
["11761061_at",394.43216,436.13846,385.21356,351.50775,363.25504,409.73218,0.017059326,0.16206837,-0.017059326,-0.14916134,-0.101735115,0.07196331,0.5802446,0.26047447,1.081975,0.11366714,1.081975,"up","UQCRC1",7384,"0006119 // oxidative phosphorylation // traceable author statement /// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0009060 // aerobic respiration // traceable author statement /// 0014823 // response to activity // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0043279 // response to alkaloid // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // traceable author statement","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005746 // mitochondrial respiratory chain // traceable author statement /// 0005750 // mitochondrial respiratory chain complex III // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0008121 // ubiquinol-cytochrome-c reductase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:48641403-48647069 (-) // 99.38 // p21.31"]
["11751683_a_at",263.40182,270.77518,272.75632,245.38963,243.65213,227.85551,0.051095486,0.09092569,0.101442814,-0.051095486,-0.061347008,-0.15805006,0.11716892,0.010143016,1.1260874,0.17131884,1.1260874,"up","RAB11A",8766,"0000910 // cytokinesis // inferred from mutant phenotype /// 0006184 // GTP catabolic process // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from direct assay /// 0031175 // neuron projection development // inferred from mutant phenotype /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048227 // plasma membrane to endosome transport // non-traceable author statement /// 0051223 // regulation of protein transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0072659 // protein localization in plasma membrane // inferred from direct assay","0005739 // mitochondrion // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0032154 // cleavage furrow // inferred from direct assay /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay /// 0055037 // recycling endosome // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0019905 // syntaxin binding // non-traceable author statement","chr15:66161793-66180585 (+) // 99.8 // q22.31"]
["11738815_at",16.48502,15.136437,12.979887,14.447046,15.231484,12.7041445,0.15675545,0.033625603,-0.18812227,-0.033625603,0.04265642,-0.21910095,0.8341125,0.60804284,1.0502816,0.070776254,1.0502816,"up","EGFR",1956,"0000165 // MAPK cascade // non-traceable author statement /// 0000186 // activation of MAPKK activity // non-traceable author statement /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001503 // ossification // non-traceable author statement /// 0001892 // embryonic placenta development // inferred from electronic annotation /// 0001942 // hair follicle development // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006950 // response to stress // non-traceable author statement /// 0007165 // signal transduction // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from direct assay /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from direct assay /// 0007173 // epidermal growth factor receptor signaling pathway // non-traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from electronic annotation /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007435 // salivary gland morphogenesis // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008544 // epidermis development // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from mutant phenotype /// 0021795 // cerebral cortex cell migration // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0031659 // positive regulation of cyclin-dependent protein kinase activity involved in G1/S // inferred from direct assay /// 0035413 // positive regulation of catenin import into nucleus // inferred from mutant phenotype /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042177 // negative regulation of protein catabolic process // inferred from direct assay /// 0042327 // positive regulation of phosphorylation // inferred from direct assay /// 0043006 // activation of phospholipase A2 activity by calcium-mediated signaling // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from direct assay /// 0045739 // positive regulation of DNA repair // inferred from direct assay /// 0045740 // positive regulation of DNA replication // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048146 // positive regulation of fibroblast proliferation // inferred from electronic annotation /// 0048546 // digestive tract morphogenesis // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from direct assay /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050730 // regulation of peptidyl-tyrosine phosphorylation // inferred from mutant phenotype /// 0050730 // regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050999 // regulation of nitric-oxide synthase activity // inferred from direct assay /// 0051205 // protein insertion into membrane // traceable author statement /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from mutant phenotype /// 0060571 // morphogenesis of an epithelial fold // inferred from electronic annotation /// 0070141 // response to UV-A // inferred from direct assay","0000139 // Golgi membrane // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // non-traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0030122 // AP-2 adaptor complex // traceable author statement /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0070435 // Shc-EGFR complex // inferred from sequence or structural similarity","0000166 // nucleotide binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // non-traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004709 // MAP kinase kinase kinase activity // non-traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from mutant phenotype /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // traceable author statement /// 0004716 // receptor signaling protein tyrosine kinase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from direct assay /// 0005006 // epidermal growth factor-activated receptor activity // inferred from direct assay /// 0005006 // epidermal growth factor-activated receptor activity // non-traceable author statement /// 0005006 // epidermal growth factor-activated receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019903 // protein phosphatase binding // inferred from physical interaction /// 0030235 // nitric-oxide synthase regulator activity // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0051015 // actin filament binding // inferred from direct assay","chr7:55086724-55238738 (+) // 96.65 // p11.2"]
["11753382_a_at",31.359516,36.55451,30.528183,36.259304,36.308014,40.888992,-0.21041632,0.01072979,-0.24917793,-0.00096845627,0.00096845627,0.17239285,0.37369937,0.105311476,-1.1543541,-0.20708583,1.1543541,"down","ZC4H2",55906,"","","0046872 // metal ion binding // inferred from electronic annotation","chrX:64137300-64196330 (-) // 100.0 // q11.2"]
["11732621_a_at",155.05919,155.39677,147.64453,138.97218,162.1904,170.5765,-0.0015687943,0.0015687943,-0.0722599,-0.15959167,0.06330061,0.13603115,0.8847685,0.70608395,-1.0262152,-0.037333295,1.0262152,"down","CRB3",92359,"0034329 // cell junction assembly // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement /// 0070830 // tight junction assembly // traceable author statement /// 0072659 // protein localization in plasma membrane // inferred from direct assay","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0017124 // SH3 domain binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction","chr19:6464248-6467228 (+) // 96.64 // p13.3"]
["11726910_x_at",830.2275,742.50494,732.17737,895.31915,843.3334,849.5598,-0.01129818,-0.17240429,-0.1926117,0.09759712,0.01129818,0.021910667,0.27221602,0.05621224,-1.1243101,-0.16904005,1.1243101,"down","MRI1",84245,"0000096 // sulfur amino acid metabolic process // traceable author statement /// 0006595 // polyamine metabolic process // traceable author statement /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009086 // methionine biosynthetic process // inferred from electronic annotation /// 0019509 // L-methionine salvage from methylthioadenosine // not recorded /// 0019509 // L-methionine salvage from methylthioadenosine // inferred from electronic annotation /// 0019509 // L-methionine salvage from methylthioadenosine // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044237 // cellular metabolic process // inferred from electronic annotation /// 0044249 // cellular biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0042995 // cell projection // inferred from electronic annotation","0016853 // isomerase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0046523 // S-methyl-5-thioribose-1-phosphate isomerase activity // not recorded /// 0046523 // S-methyl-5-thioribose-1-phosphate isomerase activity // inferred from electronic annotation","chr19:13875361-13885095 (+) // 38.97 // p13.2"]
["11729067_a_at",27.01164,38.832558,39.690174,38.442986,37.58776,47.22262,-0.51641226,0.007273197,0.03878832,-0.007273197,-0.03973055,0.2894845,0.6355624,0.31764612,-1.1790382,-0.23761041,1.1790382,"down","PM20D1",148811,"0006508 // proteolysis // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:205797153-205819270 (-) // 94.85 // q32.1"]
["11735923_x_at",95.66829,105.290344,104.93542,91.03657,125.08032,145.08295,-0.13582468,0.0024356842,-0.0024356842,-0.20741892,0.25091743,0.46494007,0.6647919,0.35065266,-1.1605064,-0.21475443,1.1605064,"down","AMELY",266,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0031214 // biomineral tissue development // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0044420 // extracellular matrix part // inferred by curator","0030345 // structural constituent of tooth enamel // inferred from direct assay","chrY:6733958-6742068 (-) // 100.0 // p11.2"]
["11715838_a_at",414.55325,463.27905,457.6444,527.06,517.563,536.8654,-0.24025059,-0.07992649,-0.09758091,0.10615921,0.07992649,0.13275242,0.11494805,0.009785536,-1.18553,-0.24553211,1.18553,"down","NEU1",4758,"0006665 // sphingolipid metabolic process // traceable author statement /// 0006687 // glycosphingolipid metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005764 // lysosome // traceable author statement /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043202 // lysosomal lumen // traceable author statement /// 0043202 // lysosomal lumen // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0004308 // exo-alpha-sialidase activity // traceable author statement /// 0004308 // exo-alpha-sialidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0052794 // exo-alpha-(2->3)-sialidase activity // inferred from electronic annotation /// 0052795 // exo-alpha-(2->6)-sialidase activity // inferred from electronic annotation /// 0052796 // exo-alpha-(2->8)-sialidase activity // inferred from electronic annotation","chr6:31826829-31830709 (-) // 98.05 // p21.33"]
["11724977_a_at",113.55419,116.5527,107.4351,112.22285,111.65943,126.01572,0.008507252,0.046108723,-0.07140827,-0.008507252,-0.015768528,0.15873003,0.76606816,0.4918103,-1.0355631,-0.05041548,1.0355631,"down","ITGB4",3691,"0007154 // cell communication // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0009611 // response to wounding // inferred from direct assay /// 0031581 // hemidesmosome assembly // inferred from direct assay /// 0031581 // hemidesmosome assembly // traceable author statement /// 0034329 // cell junction assembly // traceable author statement /// 0046847 // filopodium assembly // inferred from electronic annotation /// 0048870 // cell motility // inferred from mutant phenotype","0005604 // basement membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0008305 // integrin complex // inferred from electronic annotation /// 0008305 // integrin complex // traceable author statement /// 0009925 // basal plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030056 // hemidesmosome // inferred from direct assay /// 0030056 // hemidesmosome // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from direct assay","0004872 // receptor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr17:73720775-73753899 (+) // 97.34 // q25.1"]
["11727630_s_at",11.766565,11.667327,11.432425,10.690036,11.9931555,11.12183,0.026890755,0.014671326,-0.014671326,-0.111536026,0.05440855,-0.05440855,0.7095081,0.41011107,1.0325004,0.04614232,1.0325004,"up","APBA2",321,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation","0001540 // beta-amyloid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr15:29131174-29410518 (+) // 97.63 // q13.1"]
["11721492_a_at",10.095732,12.294897,10.52551,9.84287,11.263642,10.436451,-0.05401492,0.23029923,0.0061295033,-0.09060955,0.10391307,-0.006129265,0.8316856,0.6017029,1.0413198,0.058413267,1.0413198,"up","ANKRD7",56311,"0008584 // male gonad development // traceable author statement","","","chr7:117864158-117882761 (+) // 77.6 // q31.31"]
["11745824_x_at",214.55617,242.93661,264.32748,266.43964,269.0509,266.29138,-0.30631065,-0.12708616,-0.0053396225,0.0061426163,0.020213127,0.0053396225,0.4424005,0.14773595,-1.1148199,-0.15681064,1.1148199,"down","ACAA1",30,"0000038 // very long-chain fatty acid metabolic process // inferred from mutant phenotype /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006635 // fatty acid beta-oxidation // inferred from mutant phenotype /// 0008152 // metabolic process // inferred from electronic annotation /// 0008206 // bile acid metabolic process // inferred from mutant phenotype /// 0033540 // fatty acid beta-oxidation using acyl-CoA oxidase // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation /// 0005782 // peroxisomal matrix // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003824 // catalytic activity // inferred from electronic annotation /// 0003988 // acetyl-CoA C-acyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016401 // palmitoyl-CoA oxidase activity // inferred from mutant phenotype /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation","chr3:38164206-38178628 (-) // 96.78 // p22.2"]
["11753172_a_at",35.30944,44.62448,48.278484,42.431507,45.144806,48.11143,-0.34614372,-0.008362293,0.10518265,-0.08106184,0.008362293,0.10018206,0.8077581,0.55989516,-1.0660452,-0.092268564,1.0660452,"down","GRB7",2886,"0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0017148 // negative regulation of translation // inferred from sequence or structural similarity /// 0017148 // negative regulation of translation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0034063 // stress granule assembly // inferred from sequence or structural similarity /// 0034063 // stress granule assembly // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0010494 // cytoplasmic stress granule // inferred from sequence or structural similarity /// 0010494 // cytoplasmic stress granule // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from direct assay /// 0035091 // phosphatidylinositol binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction","chr17:37894558-37900857 (+) // 99.74 // q12"]
["11760649_a_at",39.314457,46.252083,41.814613,29.96856,34.869812,34.559616,0.0865407,0.32099915,0.175488,-0.30506945,-0.0865407,-0.09943199,0.17028205,0.021990256,1.2816687,0.35802335,1.2816687,"up","MKNK1",8569,"0006417 // regulation of translation // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr1:47023089-47082515 (-) // 99.93 // p33"]
["11738270_a_at",25.610859,24.812958,27.030245,27.015417,25.431015,31.241041,-0.03851366,-0.08417559,0.03930521,0.03851366,-0.048680305,0.24817324,0.64084643,0.32332322,-1.0770836,-0.107130215,1.0770836,"down","SERP2",387923,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr13:44947886-44971849 (+) // 91.7 // q14.11"]
["11735541_at",6.92045,8.013916,7.314669,8.06952,7.056227,7.8226004,-0.12835455,0.083287,-0.04842782,0.093262434,-0.10032344,0.04842782,0.8436489,0.62499964,-1.0316503,-0.044954028,1.0316503,"down","CCDC122",160857,"","","","chr13:44410490-44454599 (-) // 80.6 // q14.11"]
["11745604_x_at",105.889565,99.26053,89.87168,106.40276,96.72287,103.68436,0.06181574,-0.03145361,-0.1748066,0.068790436,-0.068816185,0.031453133,0.7748992,0.50504404,-1.041472,-0.058623996,1.041472,"down","NFKBIB",4793,"0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006351 // transcription, DNA-dependent // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007253 // cytoplasmic sequestering of NF-kappaB // inferred from electronic annotation /// 0008063 // Toll signaling pathway // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0003713 // transcription coactivator activity // traceable author statement /// 0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr19:39390672-39399458 (+) // 96.25 // q13.2"]
["11754940_s_at",1270.2233,1204.699,1308.5645,1137.0599,1100.2362,999.2558,0.11809158,0.041682243,0.16099453,-0.041682243,-0.08917713,-0.22806454,0.1867308,0.026356658,1.170045,0.22656403,1.170045,"up","TSN",7247,"0006310 // DNA recombination // traceable author statement /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr2:122523605-122524869 (+) // 82.15 // q14.3"]
["11734199_a_at",7.429567,9.596285,9.614257,8.600157,10.635219,11.97292,-0.37054777,-0.0013496876,0.0013494492,-0.15946293,0.14695191,0.3178773,0.6134229,0.29339236,-1.1690241,-0.22530468,1.1690241,"down","ZNF844",284391,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:12175527-12191178 (+) // 67.75 // p13.2"]
["11721375_a_at",24.260426,28.146873,25.206003,21.636879,25.215618,27.08963,-0.055437565,0.15893221,-0.00027513504,-0.22055006,0.00027513504,0.10369825,0.80752915,0.5594044,1.0520953,0.07326538,1.0520953,"up","BCL2",596,"0000082 // G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 0000209 // protein polyubiquitination // inferred from direct assay /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001101 // response to acid // inferred from electronic annotation /// 0001503 // ossification // inferred from electronic annotation /// 0001541 // ovarian follicle development // inferred from electronic annotation /// 0001656 // metanephros development // inferred from electronic annotation /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0001658 // branching involved in ureteric bud morphogenesis // inferred from electronic annotation /// 0001662 // behavioral fear response // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001776 // leukocyte homeostasis // inferred from electronic annotation /// 0001782 // B cell homeostasis // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0001836 // release of cytochrome c from mitochondria // inferred from sequence or structural similarity /// 0001836 // release of cytochrome c from mitochondria // non-traceable author statement /// 0001952 // regulation of cell-matrix adhesion // inferred from electronic annotation /// 0002260 // lymphocyte homeostasis // inferred from electronic annotation /// 0002320 // lymphoid progenitor cell differentiation // inferred from electronic annotation /// 0002326 // B cell lineage commitment // inferred from electronic annotation /// 0002360 // T cell lineage commitment // inferred from electronic annotation /// 0002520 // immune system development // inferred from electronic annotation /// 0003014 // renal system process // inferred from electronic annotation /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006582 // melanin metabolic process // inferred from electronic annotation /// 0006808 // regulation of nitrogen utilization // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from direct assay /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006959 // humoral immune response // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from mutant phenotype /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007015 // actin filament organization // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007565 // female pregnancy // non-traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0007569 // cell aging // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0008219 // cell death // inferred from direct assay /// 0008219 // cell death // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0009314 // response to radiation // non-traceable author statement /// 0009408 // response to heat // inferred from electronic annotation /// 0009605 // response to external stimulus // inferred from electronic annotation /// 0009636 // response to toxin // inferred from direct assay /// 0009636 // response to toxin // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010035 // response to inorganic substance // inferred from electronic annotation /// 0010039 // response to iron ion // inferred from direct assay /// 0010044 // response to aluminum ion // inferred from electronic annotation /// 0010224 // response to UV-B // inferred from electronic annotation /// 0010332 // response to gamma radiation // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010559 // regulation of glycoprotein biosynthetic process // inferred from electronic annotation /// 0014031 // mesenchymal cell development // inferred from electronic annotation /// 0014042 // positive regulation of neuron maturation // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014911 // positive regulation of smooth muscle cell migration // inferred from electronic annotation /// 0016049 // cell growth // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from electronic annotation /// 0018107 // peptidyl-threonine phosphorylation // inferred from electronic annotation /// 0021747 // cochlear nucleus development // inferred from electronic annotation /// 0022612 // gland morphogenesis // inferred from electronic annotation /// 0022898 // regulation of transmembrane transporter activity // inferred from direct assay /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0030183 // B cell differentiation // inferred from electronic annotation /// 0030217 // T cell differentiation // inferred from electronic annotation /// 0030279 // negative regulation of ossification // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from direct assay /// 0030308 // negative regulation of cell growth // inferred from electronic annotation /// 0030318 // melanocyte differentiation // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0030890 // positive regulation of B cell proliferation // inferred from mutant phenotype /// 0031000 // response to caffeine // inferred from electronic annotation /// 0031103 // axon regeneration // inferred from electronic annotation /// 0031647 // regulation of protein stability // inferred from electronic annotation /// 0032835 // glomerulus development // inferred from electronic annotation /// 0032848 // negative regulation of cellular pH reduction // inferred from direct assay /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0032880 // regulation of protein localization // inferred from electronic annotation /// 0033033 // negative regulation of myeloid cell apoptotic process // inferred from electronic annotation /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0033591 // response to L-ascorbic acid // inferred from electronic annotation /// 0033689 // negative regulation of osteoblast proliferation // inferred from electronic annotation /// 0034097 // response to cytokine stimulus // inferred from direct assay /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0034349 // glial cell apoptotic process // inferred from electronic annotation /// 0035094 // response to nicotine // inferred from direct assay /// 0035094 // response to nicotine // inferred from electronic annotation /// 0035265 // organ growth // inferred from electronic annotation /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0040007 // growth // inferred from electronic annotation /// 0040018 // positive regulation of multicellular organism growth // inferred from electronic annotation /// 0042100 // B cell proliferation // inferred from direct assay /// 0042221 // response to chemical stimulus // inferred from electronic annotation /// 0042493 // response to drug // inferred from direct assay /// 0042493 // response to drug // inferred from mutant phenotype /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043029 // T cell homeostasis // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043067 // regulation of programmed cell death // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // inferred from electronic annotation /// 0043375 // CD8-positive, alpha-beta T cell lineage commitment // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0043496 // regulation of protein homodimerization activity // inferred from direct assay /// 0043497 // regulation of protein heterodimerization activity // inferred from direct assay /// 0043524 // negative regulation of neuron apoptotic process // inferred from direct assay /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043583 // ear development // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045636 // positive regulation of melanocyte differentiation // inferred from electronic annotation /// 0045930 // negative regulation of mitotic cell cycle // inferred from electronic annotation /// 0046671 // negative regulation of retinal cell programmed cell death // inferred from electronic annotation /// 0046688 // response to copper ion // inferred from electronic annotation /// 0046902 // regulation of mitochondrial membrane permeability // inferred from sequence or structural similarity /// 0048041 // focal adhesion assembly // inferred from electronic annotation /// 0048066 // developmental pigmentation // inferred from electronic annotation /// 0048070 // regulation of developmental pigmentation // inferred from electronic annotation /// 0048087 // positive regulation of developmental pigmentation // inferred from electronic annotation /// 0048536 // spleen development // inferred from electronic annotation /// 0048538 // thymus development // inferred from electronic annotation /// 0048545 // response to steroid hormone stimulus // inferred from electronic annotation /// 0048546 // digestive tract morphogenesis // inferred from electronic annotation /// 0048589 // developmental growth // inferred from electronic annotation /// 0048599 // oocyte development // inferred from electronic annotation /// 0048709 // oligodendrocyte differentiation // inferred from electronic annotation /// 0048743 // positive regulation of skeletal muscle fiber development // inferred from electronic annotation /// 0048753 // pigment granule organization // inferred from electronic annotation /// 0048873 // homeostasis of number of cells within a tissue // inferred from electronic annotation /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0050853 // B cell receptor signaling pathway // inferred from mutant phenotype /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051402 // neuron apoptotic process // traceable author statement /// 0051402 // neuron apoptotic process // inferred from electronic annotation /// 0051412 // response to corticosterone stimulus // inferred from electronic annotation /// 0051593 // response to folic acid // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from direct assay /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0051881 // regulation of mitochondrial membrane potential // inferred from sequence or structural similarity /// 0051902 // negative regulation of mitochondrial depolarization // traceable author statement /// 0051924 // regulation of calcium ion transport // inferred from direct assay /// 0070059 // intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress // inferred from direct assay /// 0071310 // cellular response to organic substance // inferred from electronic annotation /// 0072593 // reactive oxygen species metabolic process // inferred from electronic annotation /// 2001234 // negative regulation of apoptotic signaling pathway // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation /// 0043209 // myelin sheath // inferred from electronic annotation /// 0046930 // pore complex // inferred from direct assay","0002020 // protease binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0015267 // channel activity // inferred from direct assay /// 0019903 // protein phosphatase binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0051400 // BH domain binding // inferred from electronic annotation /// 0051434 // BH3 domain binding // inferred from physical interaction /// 0051721 // protein phosphatase 2A binding // inferred from electronic annotation","chr18:60790581-60987019 (-) // 96.73 // q21.33"]
["11715890_x_at",2336.3574,2068.3083,2000.8447,2688.1997,2316.4702,2081.3792,0.08952713,-0.08628273,-0.13412476,0.29190636,0.077194214,-0.077194214,0.6457159,0.3286709,-1.1026148,-0.14092882,1.1026148,"down","ATP5I",521,"0006200 // ATP catabolic process // inferred from direct assay /// 0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015986 // ATP synthesis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0042776 // mitochondrial ATP synthesis coupled proton transport // inferred by curator /// 0042776 // mitochondrial ATP synthesis coupled proton transport // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046034 // ATP metabolic process // inferred from electronic annotation","0000276 // mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) // inferred from electronic annotation /// 0005739 // mitochondrion // inferred by curator /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0045263 // proton-transporting ATP synthase complex, coupling factor F(o) // inferred from electronic annotation","0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0022857 // transmembrane transporter activity // inferred by curator","chr4:666224-668127 (-) // 69.88 // p16.3"]
["11741639_a_at",28.496798,31.753935,31.863379,30.379103,28.385704,27.865633,-0.046139717,0.10999584,0.11495972,0.046139717,-0.05177498,-0.07845259,0.5685369,0.24920645,1.0626265,0.08763457,1.0626265,"up","DIO2",1734,"0001514 // selenocysteine incorporation // non-traceable author statement /// 0006590 // thyroid hormone generation // traceable author statement /// 0006590 // thyroid hormone generation // inferred from electronic annotation /// 0009409 // response to cold // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042403 // thyroid hormone metabolic process // inferred from direct assay /// 0042404 // thyroid hormone catabolic process // inferred from electronic annotation /// 0042446 // hormone biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred by curator /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004800 // thyroxine 5'-deiodinase activity // inferred from direct assay /// 0004800 // thyroxine 5'-deiodinase activity // traceable author statement /// 0004800 // thyroxine 5'-deiodinase activity // inferred from electronic annotation /// 0008430 // selenium binding // inferred by curator /// 0008430 // selenium binding // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr14:80663869-80677843 (-) // 97.08 // q31.1"]
["11737705_s_at",13.536158,14.364676,13.613196,13.536158,14.081947,14.917683,-0.032607794,0.053099394,-0.0244205,-0.032607794,0.0244205,0.10759711,0.7846672,0.52097154,-1.0241636,-0.034446195,1.0241636,"down","LOC441956",441956,"","","","chr21:15051592-15053459 (-) // 94.97 // q11.2"]
["11745173_a_at",461.21164,448.79883,455.2228,450.29416,499.61966,444.8442,0.026708603,-0.0126514435,0.007852554,-0.007852554,0.14210987,-0.025420189,0.84241575,0.62224317,-1.0202875,-0.028975757,1.0202875,"down","ATF6",22926,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006457 // protein folding // traceable author statement /// 0006950 // response to stress // traceable author statement /// 0006986 // response to unfolded protein // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0006990 // positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003713 // transcription coactivator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr1:161736044-161835750 (+) // 76.51 // q23.3"]
["11743650_s_at",3563.8362,3442.1677,3521.9854,4034.6975,3797.4136,3642.6445,-0.015777588,-0.065891266,-0.032818794,0.16325188,0.07580948,0.015777588,0.264582,0.053028885,-1.0890791,-0.1231088,1.0890791,"down","DEK",7913,"0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0019079 // viral genome replication // traceable author statement /// 2000779 // regulation of double-strand break repair // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0042393 // histone binding // inferred from direct assay","chr6:18224247-18265054 (-) // 96.95 // p22.3"]
["11722908_a_at",2087.2112,1816.9595,1909.6565,1846.4595,1701.3652,1646.3275,0.1884327,-0.0116176605,0.06016922,0.0116176605,-0.106451035,-0.15389252,0.3668424,0.101604834,1.1187621,0.16190334,1.1187621,"up","KLHL13",90293,"0000910 // cytokinesis // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0031463 // Cul3-RING ubiquitin ligase complex // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // inferred from direct assay","chrX:117031775-117107760 (-) // 96.61 // q24"]
["11736322_a_at",55.34816,64.95218,66.81651,76.26679,64.53072,72.1031,-0.251256,-0.020413399,0.020412922,0.21126366,-0.029805183,0.13027,0.46478677,0.16414091,-1.1389163,-0.18766166,1.1389163,"down","BAIAP3",8938,"0007186 // G-protein coupled receptor signaling pathway // inferred from physical interaction /// 0007269 // neurotransmitter secretion // traceable author statement","","0008022 // protein C-terminus binding // traceable author statement","chr16:1384504-1399440 (+) // 97.1 // p13.3"]
["11727575_a_at",98.68045,109.7063,113.862144,137.34111,112.45837,93.66134,-0.17068243,-0.017872334,0.03576994,0.30624485,0.01787281,-0.24599266,0.8701402,0.6760175,-1.0548004,-0.07697001,1.0548004,"down","TMEM237",65062,"0030030 // cell projection organization // inferred from electronic annotation /// 0030111 // regulation of Wnt receptor signaling pathway // inferred from mutant phenotype /// 0030111 // regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from mutant phenotype /// 0042384 // cilium assembly // inferred from electronic annotation","0005929 // cilium // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0035869 // ciliary transition zone // inferred from direct assay /// 0035869 // ciliary transition zone // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","","chr2:202484910-202507686 (-) // 72.55 // q33.1"]
["11752260_a_at",13.891977,15.183994,17.387434,13.626755,17.393137,18.396091,-0.22604632,-0.09774709,0.09774685,-0.25385642,0.09821987,0.17910099,0.8499412,0.6364819,-1.0593435,-0.083170414,1.0593435,"down","TMC3",342125,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr15:81629982-81666497 (-) // 93.69 // q25.1"]
["11745069_a_at",78.38327,77.96858,89.82661,89.599144,116.52585,82.70147,-0.13515282,-0.14280558,0.06144476,0.057785988,0.43687916,-0.05778551,0.5739022,0.25407618,-1.162957,-0.2177977,1.162957,"down","C5orf44",80006,"","","","chr5:64958926-64961899 (+) // 89.97 // q12.3"]
["11748282_a_at",162.29202,148.84117,145.65913,197.9535,142.13028,143.53516,0.14040756,0.01558876,-0.015588284,0.42697716,-0.050970554,-0.036780357,0.885187,0.7069424,-1.0470082,-0.06627268,1.0470082,"down","PPP3CB",5532,"0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006470 // protein dephosphorylation // inferred from sequence or structural similarity /// 0007165 // signal transduction // non-traceable author statement /// 0007612 // learning // traceable author statement /// 0007613 // memory // traceable author statement /// 0016311 // dephosphorylation // traceable author statement /// 0017156 // calcium ion-dependent exocytosis // inferred from sequence or structural similarity /// 0035176 // social behavior // inferred from expression pattern /// 0035690 // cellular response to drug // inferred from direct assay /// 0035774 // positive regulation of insulin secretion involved in cellular response to glucose stimulus // inferred from sequence or structural similarity /// 0042098 // T cell proliferation // non-traceable author statement /// 0042110 // T cell activation // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement /// 0048167 // regulation of synaptic plasticity // traceable author statement /// 0048675 // axon extension // traceable author statement /// 0050796 // regulation of insulin secretion // inferred from sequence or structural similarity","0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005955 // calcineurin complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // non-traceable author statement /// 0005509 // calcium ion binding // inferred from direct assay /// 0005516 // calmodulin binding // inferred from direct assay /// 0005516 // calmodulin binding // non-traceable author statement /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0008144 // drug binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from direct assay /// 0030346 // protein phosphatase 2B binding // inferred from direct assay /// 0033192 // calmodulin-dependent protein phosphatase activity // inferred from sequence or structural similarity /// 0033192 // calmodulin-dependent protein phosphatase activity // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from physical interaction","chr10:75196996-75226245 (-) // 98.36 // q22.2"]
["11728165_a_at",12.303791,17.10402,15.158955,12.544729,12.575435,14.208538,-0.11958027,0.3556521,0.18148708,-0.09160185,-0.08807516,0.08807516,0.64108557,0.32377288,1.1248404,0.16972029,1.1248404,"up","SPINLW1 /// SPINLW1-WFDC6","100526773 /// 57119","0006508 // proteolysis // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr20:44169549-44175016 (-) // 46.5 // q13.12"]
["11760927_a_at",60.121838,68.79951,64.19529,58.479855,59.90868,58.22233,0.002562046,0.19707108,0.097139835,-0.03738737,-0.0025615692,-0.043754578,0.34986427,0.092455216,1.0918884,0.12682544,1.0918884,"up","LRCH3",84859,"","0005576 // extracellular region // inferred from electronic annotation","","chr3:197518109-197610643 (+) // 99.4 // q29"]
["11762829_at",26.493382,30.944447,33.539738,26.21664,31.217188,36.751125,-0.23037863,-0.0063300133,0.1098609,-0.24552774,0.0063300133,0.2417779,0.93182,0.8148591,-1.0303558,-0.043142628,1.0303558,"down","LOC100506242",100506242,"","","","chr1:180138711-180139938 (+) // 98.94 // q25.2"]
["11725481_a_at",25.243395,31.523876,29.126581,26.653688,31.263983,33.057518,-0.25751305,0.06302595,-0.05108261,-0.17908382,0.05108261,0.13155937,0.8097983,0.56383234,-1.0592496,-0.08304264,1.0592496,"down","CD27",939,"0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from direct assay /// 0006916 // anti-apoptosis // inferred from sequence or structural similarity /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006917 // induction of apoptosis // inferred from sequence or structural similarity /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // non-traceable author statement /// 0008588 // release of cytoplasmic sequestered NF-kappaB // non-traceable author statement /// 0016064 // immunoglobulin mediated immune response // non-traceable author statement /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045579 // positive regulation of B cell differentiation // non-traceable author statement /// 0046330 // positive regulation of JNK cascade // inferred from sequence or structural similarity /// 0046330 // positive regulation of JNK cascade // inferred from electronic annotation","0005576 // extracellular region // non-traceable author statement /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043027 // cysteine-type endopeptidase inhibitor activity involved in apoptotic process // inferred from direct assay","chr12:6554005-6560879 (+) // 98.05 // p13.31"]
["11747748_a_at",23.412216,22.387226,27.54125,20.487057,23.684053,21.626913,0.032292843,-0.032292843,0.2666254,-0.16025591,0.048947334,-0.08214092,0.55184954,0.23365054,1.1121553,0.15335828,1.1121553,"up","ETV1",2115,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0048935 // peripheral nervous system neuron development // traceable author statement","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr7:13935307-14026086 (-) // 98.49 // p21.2"]
["11753489_a_at",847.8885,759.52344,754.9653,1136.8134,1011.2995,962.55145,-0.09149456,-0.25027466,-0.25895882,0.3315544,0.16276932,0.09149456,0.12408652,0.011565418,-1.3154126,-0.39551544,1.3154126,"down","EED",8726,"0006349 // regulation of gene expression by genetic imprinting // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016571 // histone methylation // inferred from direct assay /// 0016571 // histone methylation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // non-traceable author statement","0001739 // sex chromatin // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0035098 // ESC/E(Z) complex // inferred from direct assay /// 0035098 // ESC/E(Z) complex // inferred from electronic annotation /// 0045120 // pronucleus // inferred from electronic annotation","0003682 // chromatin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042054 // histone methyltransferase activity // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction","chr11:85956265-85988054 (+) // 99.75 // q14.2"]
["11736030_a_at",2379.3652,2325.6177,2337.147,2324.0872,1825.3696,2171.2593,0.03343773,0.0004749298,0.0076093674,-0.0004749298,-0.3489504,-0.09860706,0.5019997,0.1924858,1.1197563,0.16318484,1.1197563,"up","SLC16A3",9123,"0006090 // pyruvate metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0015711 // organic anion transport // inferred from electronic annotation /// 0015718 // monocarboxylic acid transport // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay","0008028 // monocarboxylic acid transmembrane transporter activity // traceable author statement /// 0015293 // symporter activity // inferred from electronic annotation /// 0015355 // secondary active monocarboxylate transmembrane transporter activity // inferred from electronic annotation","chr17:80193855-80197354 (+) // 93.66 // q25.3"]
["11759273_x_at",18.89056,15.237557,21.383612,12.904635,13.947596,14.262435,0.35773945,0.04770565,0.5365796,-0.19203639,-0.07990956,-0.047705412,0.2515027,0.048034377,1.3384458,0.4205587,1.3384458,"up","HIST1H2BC /// HIST1H2BE /// HIST1H2BF /// HIST1H2BG /// HIST1H2BI","8339 /// 8343 /// 8344 /// 8346 /// 8347","0006334 // nucleosome assembly // non-traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation","0000786 // nucleosome // non-traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr6:26273143-26273640 (+) // 100.0 // p22.2"]
["11720863_at",632.81885,619.8015,651.83325,603.7228,600.68427,586.7844,0.04894638,0.01896,0.091656685,-0.01896,-0.026239395,-0.06001568,0.17435022,0.02298935,1.0630867,0.088259324,1.0630867,"up","PNPLA4",8228,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation","","0004806 // triglyceride lipase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0050253 // retinyl-palmitate esterase activity // inferred from electronic annotation","chrX:7866803-7895477 (-) // 83.75 // p22.31"]
["11749228_a_at",476.4075,552.5505,555.5636,528.699,572.49164,519.80023,-0.18208027,0.031829834,0.039675713,-0.031829834,0.08297825,-0.056319237,0.8806532,0.6985214,-1.0246525,-0.03513469,1.0246525,"down","TMEM30A",55754,"0036010 // protein localization in endosome // inferred from mutant phenotype /// 0070863 // positive regulation of protein exit from endoplasmic reticulum // inferred from direct assay","0005783 // endoplasmic reticulum // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr6:75965367-75994502 (-) // 93.61 // q14.1"]
["11716184_s_at",434.6752,422.83707,457.01804,550.53503,538.6684,531.3808,-0.18106079,-0.22089672,-0.10874748,0.15983582,0.1283989,0.10874748,0.042438295,0.0011014454,-1.233333,-0.30256236,1.233333,"down","ALCAM",214,"0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from electronic annotation","0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0005102 // receptor binding // traceable author statement","chr3:105085712-105295746 (+) // 96.66 // q13.11"]
["11727671_a_at",57.764713,53.96767,59.052742,28.716389,37.370064,39.47371,0.32369423,0.22560167,0.35551023,-0.6846194,-0.30461073,-0.22560167,0.108246,0.008603579,1.6318924,0.70654595,1.6318924,"up","SYT17",51760,"0006810 // transport // inferred from electronic annotation","0005802 // trans-Golgi network // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation","chr16:19179534-19279656 (+) // 91.6 // p12.3"]
["11724241_at",9.758689,11.525838,11.841662,10.616358,11.83796,10.885001,-0.19884753,0.04126501,0.08026528,-0.077317715,0.07981396,-0.04126501,0.9653012,0.90335155,-1.0089464,-0.01284956,1.0089464,"down","TCF4",6925,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006352 // transcription initiation, DNA-dependent // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0007399 // nervous system development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0065004 // protein-DNA complex assembly // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from sequence or structural similarity /// 0005667 // transcription factor complex // inferred from electronic annotation","0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from sequence or structural similarity /// 0001011 // sequence-specific DNA binding RNA polymerase recruiting transcription factor activity // inferred from sequence or structural similarity /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from sequence or structural similarity /// 0001087 // TFIIB-class binding transcription factor activity // inferred from sequence or structural similarity /// 0001093 // TFIIB-class transcription factor binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from sequence or structural similarity /// 0046982 // protein heterodimerization activity // non-traceable author statement /// 0070888 // E-box binding // inferred from sequence or structural similarity","chr18:52889564-53255860 (-) // 95.08 // q21.2"]
["11741178_a_at",13.276202,12.165044,13.545554,11.989077,11.954956,11.203884,0.13661122,0.010510445,0.16558838,-0.010510445,-0.014622211,-0.10823202,0.2820333,0.060395446,1.1085637,0.14869162,1.1085637,"up","UPB1",51733,"0006206 // pyrimidine base metabolic process // traceable author statement /// 0006807 // nitrogen compound metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0019483 // beta-alanine biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046135 // pyrimidine nucleoside catabolic process // traceable author statement /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0003837 // beta-ureidopropionase activity // not recorded /// 0003837 // beta-ureidopropionase activity // inferred from electronic annotation /// 0003837 // beta-ureidopropionase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016810 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr22:24891114-24922552 (+) // 71.56 // q11.23"]
["11746802_x_at",1073.6484,1045.4202,1068.6042,1080.1206,973.73883,926.0199,0.022616386,-0.01582241,0.01582241,0.031287193,-0.11829853,-0.19079018,0.518924,0.20627508,1.071877,0.100139365,1.071877,"up","BNIP3L",665,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0008634 // negative regulation of survival gene product expression // inferred from direct assay /// 0035694 // mitochondrial protein catabolic process // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005740 // mitochondrial envelope // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from mutant phenotype /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031224 // intrinsic to membrane // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0005521 // lamin binding // inferred from direct assay /// 0005521 // lamin binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay","chr8:26240552-26268534 (+) // 98.94 // p21.2"]
["11732426_a_at",9.149153,7.477209,7.6950216,7.7204614,8.183473,7.34398,0.24733186,-0.043806314,-0.002380848,0.0023806095,0.086406946,-0.06974411,0.820343,0.582069,1.042972,0.060700383,1.042972,"up","GNA14",9630,"0006184 // GTP catabolic process // traceable author statement /// 0006471 // protein ADP-ribosylation // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // not recorded /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0060158 // phospholipase C-activating dopamine receptor signaling pathway // not recorded","0005834 // heterotrimeric G-protein complex // not recorded /// 0005834 // heterotrimeric G-protein complex // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0031234 // extrinsic to internal side of plasma membrane // not recorded","0000166 // nucleotide binding // inferred from electronic annotation /// 0001664 // G-protein coupled receptor binding // not recorded /// 0003924 // GTPase activity // traceable author statement /// 0004871 // signal transducer activity // not recorded /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004871 // signal transducer activity // non-traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // not recorded /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:80037512-80263664 (-) // 98.65 // q21.2"]
["11745158_x_at",1573.06,1234.2482,1196.723,1066.2117,901.4913,792.2161,0.47778225,0.127841,0.08329773,-0.08329773,-0.32540607,-0.51182556,0.22292861,0.03804404,1.4504328,0.5364834,1.4504328,"up","MUC1",4582,"0006916 // anti-apoptosis // inferred from direct assay /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // inferred from direct assay /// 0006978 // DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator // inferred from direct assay /// 0010944 // negative regulation of transcription by competitive promoter binding // inferred from direct assay /// 0016266 // O-glycan processing // traceable author statement /// 0036003 // positive regulation of transcription from RNA polymerase II promoter in response to stress // inferred from direct assay /// 0043618 // regulation of transcription from RNA polymerase II promoter in response to stress // inferred from direct assay /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0090240 // positive regulation of histone H4 acetylation // inferred from direct assay","0000790 // nuclear chromatin // inferred from direct assay /// 0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005796 // Golgi lumen // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // not recorded /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // not recorded /// 0016324 // apical plasma membrane // inferred from electronic annotation","0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0002039 // p53 binding // inferred from physical interaction /// 0003712 // transcription cofactor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr1:155158423-155162684 (-) // 100.0 // q22"]
["11722098_a_at",104.44104,141.48521,131.2757,88.744644,134.51558,127.824715,-0.31069517,0.12726784,0.019216537,-0.54565144,0.054389954,-0.019216537,0.8531433,0.6426091,1.0832921,0.11542234,1.0832921,"up","RICTOR",253260,"0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009790 // embryo development // inferred from sequence or structural similarity /// 0009790 // embryo development // inferred from electronic annotation /// 0030838 // positive regulation of actin filament polymerization // inferred from electronic annotation /// 0031295 // T cell costimulation // traceable author statement /// 0031532 // actin cytoskeleton reorganization // inferred from mutant phenotype /// 0032008 // positive regulation of TOR signaling cascade // inferred from mutant phenotype /// 0032314 // regulation of Rac GTPase activity // inferred from electronic annotation /// 0032956 // regulation of actin cytoskeleton organization // inferred from mutant phenotype /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0051896 // regulation of protein kinase B signaling cascade // inferred from direct assay /// 0051896 // regulation of protein kinase B signaling cascade // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0031932 // TORC2 complex // inferred from direct assay /// 0031932 // TORC2 complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0043022 // ribosome binding // inferred from electronic annotation","chr5:38938021-39074503 (-) // 97.8 // p13.1"]
["11761794_x_at",33.485687,33.062183,28.970776,29.782064,32.449577,33.733963,0.031853676,0.013491154,-0.17709255,-0.13724709,-0.013491154,0.042510986,0.9759644,0.93121606,-1.0054492,-0.007840157,1.0054492,"down","FAM122C",159091,"","","","chrX:133941299-133955985 (+) // 83.02 // q26.3"]
["11732234_a_at",36.49292,32.61673,41.071114,31.519949,34.41861,30.977552,0.12321615,-0.03878832,0.29372358,-0.08813524,0.03878832,-0.1131773,0.46873882,0.16710238,1.1330607,0.18022513,1.1330607,"up","RND1",27289,"0006184 // GTP catabolic process // non-traceable author statement /// 0007015 // actin filament organization // inferred from direct assay /// 0007162 // negative regulation of cell adhesion // inferred from direct assay /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0016322 // neuron remodeling // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005912 // adherens junction // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // non-traceable author statement /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation","chr12:49250931-49259681 (-) // 97.96 // q13.12"]
["11717396_a_at",1254.0692,1094.2228,1111.261,1132.3898,957.5038,940.4906,0.185565,-0.011145592,0.011145592,0.038318634,-0.20370197,-0.22956657,0.43128994,0.14075096,1.1435385,0.1935049,1.1435385,"up","CHTF8",54921,"0006260 // DNA replication // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr16:68973480-69155398 (-) // 95.1 // q22.1"]
["11731720_at",15.732191,22.419104,21.438145,13.869998,19.419334,18.91435,-0.28476787,0.22624111,0.16169262,-0.46651983,0.019006252,-0.019006252,0.73420775,0.44407132,1.1406809,0.18989527,1.1406809,"up","LURAP1",541468,"0001819 // positive regulation of cytokine production // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","","chr1:46669005-46687158 (+) // 83.24 // p34.1"]
["11759378_at",20.423094,23.373133,19.116997,30.820145,28.127232,31.185673,-0.32820797,-0.13355827,-0.42355347,0.2654643,0.13355827,0.28247404,0.08991102,0.005848964,-1.4362154,-0.5222721,1.4362154,"down","NHSL2",340527,"","","","chrX:71353497-71361212 (+) // 99.3 // q13.1"]
["11728541_s_at",26.075624,30.134443,31.0003,24.51859,30.345154,30.614868,-0.21373796,-0.0050263405,0.03584242,-0.30256367,0.0050263405,0.017792702,0.9324228,0.81636816,1.022623,0.0322743,1.022623,"up","MDGA1",266727,"0001764 // neuron migration // inferred from sequence or structural similarity /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007420 // brain development // inferred from sequence or structural similarity /// 0007420 // brain development // inferred from electronic annotation /// 0021527 // spinal cord association neuron differentiation // inferred from sequence or structural similarity /// 0021527 // spinal cord association neuron differentiation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation /// 0046658 // anchored to plasma membrane // inferred from direct assay /// 0046658 // anchored to plasma membrane // inferred from sequence or structural similarity /// 0046658 // anchored to plasma membrane // inferred from electronic annotation","","chr6:37600292-37665766 (-) // 93.0 // p21.2"]
["11741765_a_at",20.248045,23.610529,20.984436,16.757812,22.159647,24.057886,-0.09084463,0.13080311,-0.039307594,-0.36379337,0.039307594,0.15788269,0.9098311,0.7614119,1.0394002,0.055751268,1.0394002,"up","METTL20",254013,"0006479 // protein methylation // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0008168 // methyltransferase activity // inferred from electronic annotation /// 0008276 // protein methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr12:31800090-31821817 (+) // 67.24 // p11.21"]
["11720384_at",280.17883,277.66837,285.82663,409.2866,433.38956,446.2771,-0.2877779,-0.30076313,-0.25898552,0.25898552,0.34153843,0.38381386,0.018006893,9.405361e-5,-1.5269167,-0.6106214,1.5269167,"down","STX6",10228,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006906 // vesicle fusion // inferred from physical interaction /// 0007032 // endosome organization // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0042147 // retrograde transport, endosome to Golgi // inferred from mutant phenotype /// 0048193 // Golgi vesicle transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // traceable author statement /// 0032588 // trans-Golgi network membrane // inferred from sequence or structural similarity /// 0032588 // trans-Golgi network membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005484 // SNAP receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:180941851-180992257 (-) // 97.46 // q25.3"]
["11730642_at",10.475568,10.225509,10.559973,10.78531,11.449596,8.025626,-0.005788803,-0.040644884,0.005788803,0.036250353,0.12247944,-0.39013147,0.88624316,0.7097944,1.0450599,0.06358566,1.0450599,"up","CXorf48",54967,"","","","chrX:134290460-134305751 (-) // 86.07 // q26.3"]
["11717826_x_at",9.261211,8.1274,7.8751454,7.5863132,7.8282413,8.895247,0.21115065,0.022743702,-0.022743702,-0.076651335,-0.031362057,0.15298438,0.83532023,0.6101259,1.0391423,0.055393163,1.0391423,"up","STMN2",11075,"0007026 // negative regulation of microtubule depolymerization // inferred from direct assay /// 0010976 // positive regulation of neuron projection development // inferred from direct assay /// 0010977 // negative regulation of neuron projection development // inferred from direct assay /// 0030182 // neuron differentiation // non-traceable author statement /// 0031115 // negative regulation of microtubule polymerization // inferred from direct assay /// 0031117 // positive regulation of microtubule depolymerization // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0031982 // vesicle // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr8:80523048-80578397 (+) // 92.49 // q21.13"]
["11759396_a_at",104.23419,99.62681,91.889534,104.907265,98.82802,107.22031,0.03261137,-0.03261137,-0.14924526,0.041897297,-0.044225693,0.07336092,0.63198215,0.3135976,-1.0522124,-0.0734259,1.0522124,"down","BTN2A3P",54718,"","0016021 // integral to membrane // inferred from electronic annotation","","chr6:26422346-26431843 (+) // 100.0 // p22.2"]
["11718709_a_at",174.85938,134.78252,148.17476,190.90697,156.7657,146.33379,0.19824028,-0.17732143,-0.04065466,0.32491493,0.040655136,-0.0586915,0.7907279,0.5309459,-1.0783844,-0.10887153,1.0783844,"down","TBC1D9B",23061,"0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation","chr5:179289065-179334881 (-) // 94.81 // q35.3"]
["11756889_s_at",9.309817,9.493302,10.269664,7.556962,8.627087,10.986596,-0.014078379,0.014078617,0.12748551,-0.3150251,-0.12395811,0.22484112,0.7872782,0.52534425,1.0821316,0.11387599,1.0821316,"up","SNAP91",9892,"0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0030100 // regulation of endocytosis // inferred from electronic annotation /// 0048268 // clathrin coat assembly // inferred from electronic annotation /// 0051223 // regulation of protein transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030118 // clathrin coat // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation /// 0005545 // 1-phosphatidylinositol binding // inferred from electronic annotation /// 0030276 // clathrin binding // inferred from electronic annotation","chr6:84262619-84417677 (-) // 91.64 // q14.2"]
["11733207_a_at",92.63325,71.65381,81.20286,113.75422,96.04014,87.34266,0.04242134,-0.32806492,-0.14757824,0.33873987,0.09452963,-0.042421818,0.44556454,0.15002793,-1.209734,-0.27468982,1.209734,"down","ZNF480",147657,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:52800420-52826572 (+) // 39.83 // q13.41"]
["11719541_a_at",396.8553,413.31207,449.78278,422.46436,459.38965,430.4021,-0.10364437,-0.045025826,0.076971054,-0.013427734,0.107460976,0.013427734,0.7078425,0.40757456,-1.0422635,-0.05972007,1.0422635,"down","GCFC1",94104,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation","chr21:34106209-34144173 (-) // 98.03 // q22.11"]
["11755665_x_at",200.21097,193.76505,189.55623,192.52354,189.50487,190.41191,0.06444168,0.01722908,-0.014453411,0.007956028,-0.014844418,-0.007955551,0.6341925,0.3161611,1.0191411,0.027353775,1.0191411,"up","VARS2",57176,"0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006418 // tRNA aminoacylation for protein translation // inferred from electronic annotation /// 0006438 // valyl-tRNA aminoacylation // inferred from electronic annotation /// 0006450 // regulation of translational fidelity // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0002161 // aminoacyl-tRNA editing activity // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004832 // valine-tRNA ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation","chr6:30886338-30894233 (+) // 92.82 // p21.33"]
["11728246_at",51.060177,60.58785,59.5372,45.671017,44.4689,49.561745,0.021485806,0.2683158,0.24307871,-0.13943386,-0.17791605,-0.021485806,0.21047345,0.033616632,1.2231251,0.29057196,1.2231251,"up","FAM134A",79137,"","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:220042938-220050201 (+) // 79.33 // q35"]
["11745944_s_at",420.05615,413.3894,426.3857,401.58908,381.1444,425.53058,0.011540413,-0.011540413,0.033117294,-0.05332184,-0.12870407,0.030220985,0.5857009,0.2656524,1.043652,0.061640814,1.043652,"up","CHPF",79586,"","0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0016740 // transferase activity // inferred from electronic annotation /// 0016758 // transferase activity, transferring hexosyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047238 // glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity // inferred from electronic annotation /// 0050510 // N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity // inferred from electronic annotation","chr2:220404093-220407819 (-) // 99.64 // q35"]
["11740999_a_at",9.100681,8.914942,7.094081,6.896087,6.8534083,7.8262453,0.28850627,0.2587571,-0.07085228,-0.111690044,-0.12064648,0.07085228,0.48529974,0.1797922,1.1588001,0.21263175,1.1588001,"up","GAP43",2596,"0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0009611 // response to wounding // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0040008 // regulation of growth // inferred from electronic annotation /// 0051489 // regulation of filopodium assembly // inferred from direct assay","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031527 // filopodium membrane // inferred from direct assay /// 0031527 // filopodium membrane // inferred from electronic annotation /// 0032584 // growth cone membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation","chr3:115342150-115440334 (+) // 75.53 // q13.31"]
["11742455_a_at",14.812504,15.071019,14.833895,14.3087,14.063261,14.288067,0.024961472,0.049922705,0.027043343,-0.024961472,-0.049922705,-0.027043343,0.074881524,0.0038610192,1.0482273,0.067951605,1.0482273,"up","DPF3",8110,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0071565 // nBAF complex // inferred from sequence or structural similarity","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:73136659-73360809 (-) // 98.94 // q24.2"]
["11718635_at",931.8781,972.20483,967.9591,739.2227,800.9021,811.2273,0.10001755,0.16113663,0.15482235,-0.23411465,-0.11849785,-0.10001755,0.06937845,0.0033159473,1.2222468,0.28953558,1.2222468,"up","KIF1B",23095,"0006200 // ATP catabolic process // inferred from sequence or structural similarity /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007018 // microtubule-based movement // inferred from sequence or structural similarity /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0007270 // neuron-neuron synaptic transmission // inferred from sequence or structural similarity /// 0007270 // neuron-neuron synaptic transmission // inferred from electronic annotation /// 0007274 // neuromuscular synaptic transmission // inferred from sequence or structural similarity /// 0007274 // neuromuscular synaptic transmission // inferred from electronic annotation /// 0008089 // anterograde axon cargo transport // inferred from sequence or structural similarity /// 0008089 // anterograde axon cargo transport // inferred from electronic annotation /// 0030705 // cytoskeleton-dependent intracellular transport // inferred from sequence or structural similarity /// 0030705 // cytoskeleton-dependent intracellular transport // inferred from electronic annotation /// 0047497 // mitochondrion transport along microtubule // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005875 // microtubule associated complex // inferred from sequence or structural similarity /// 0005875 // microtubule associated complex // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from sequence or structural similarity /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from sequence or structural similarity /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043005 // neuron projection // inferred from sequence or structural similarity","0000166 // nucleotide binding // inferred from electronic annotation /// 0003777 // microtubule motor activity // inferred from sequence or structural similarity /// 0003777 // microtubule motor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from sequence or structural similarity /// 0016887 // ATPase activity // inferred from electronic annotation /// 0019894 // kinesin binding // traceable author statement","chr1:10270763-10368652 (+) // 90.43 // p36.22"]
["11738079_at",31.945787,28.893223,17.374325,21.723562,29.60754,25.596245,0.23229408,0.08739948,-0.6463747,-0.32407093,0.12263298,-0.08739948,0.9892214,0.96858305,-1.0087821,-0.012614651,1.0087821,"down","NR2E3",10002,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007601 // visual perception // inferred from electronic annotation /// 0007601 // visual perception // traceable author statement /// 0007602 // phototransduction // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0030522 // intracellular receptor mediated signaling pathway // traceable author statement /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:72102885-72107270 (+) // 88.82 // q23"]
["11725327_a_at",227.13675,210.86345,205.69247,210.64221,200.52235,194.58473,0.12591934,0.018666744,-0.017152786,0.017152786,-0.053878784,-0.09724331,0.49140328,0.18447165,1.062258,0.08713421,1.062258,"up","CAMK2D",817,"0001558 // regulation of cell growth // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0008016 // regulation of heart contraction // traceable author statement /// 0010613 // positive regulation of cardiac muscle hypertrophy // inferred from mutant phenotype /// 0010881 // regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0060314 // regulation of ryanodine-sensitive calcium-release channel activity // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060341 // regulation of cellular localization // inferred from mutant phenotype","0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005954 // calcium- and calmodulin-dependent protein kinase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016529 // sarcoplasmic reticulum // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0033017 // sarcoplasmic reticulum membrane // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004683 // calmodulin-dependent protein kinase activity // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr4:114372189-114683202 (-) // 84.34 // q26"]
["11734301_at",24.065998,22.23259,19.689356,25.921381,23.929163,25.727457,0.0041131973,-0.11020708,-0.28546715,0.11125946,-0.0041131973,0.10042572,0.3550106,0.09545766,-1.1484683,-0.19971098,1.1484683,"down","MBL2",4153,"0001867 // complement activation, lectin pathway // inferred from direct assay /// 0001867 // complement activation, lectin pathway // inferred from physical interaction /// 0001867 // complement activation, lectin pathway // traceable author statement /// 0001867 // complement activation, lectin pathway // inferred from electronic annotation /// 0006953 // acute-phase response // traceable author statement /// 0006956 // complement activation // traceable author statement /// 0006958 // complement activation, classical pathway // inferred from electronic annotation /// 0006979 // response to oxidative stress // non-traceable author statement /// 0008228 // opsonization // traceable author statement /// 0044130 // negative regulation of growth of symbiont in host // inferred from direct assay /// 0044130 // negative regulation of growth of symbiont in host // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0050766 // positive regulation of phagocytosis // inferred from electronic annotation /// 0050830 // defense response to Gram-positive bacterium // inferred from direct assay /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation /// 0051873 // killing by host of symbiont cells // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement","0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005537 // mannose binding // non-traceable author statement /// 0005537 // mannose binding // traceable author statement /// 0005537 // mannose binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0043499 // eukaryotic cell surface binding // traceable author statement /// 0048306 // calcium-dependent protein binding // inferred from physical interaction /// 0051635 // bacterial cell surface binding // traceable author statement","chr10:54526872-54531460 (-) // 30.64 // q21.1"]
["11733687_s_at",142.90652,142.52034,125.84336,130.61499,141.88959,135.3896,0.04412937,0.04022503,-0.13931274,-0.085621834,0.033825874,-0.033825874,0.96153915,0.8904948,1.0071099,0.010221097,1.0071099,"up","STRA6",64220,"0001568 // blood vessel development // inferred from mutant phenotype /// 0001822 // kidney development // inferred from mutant phenotype /// 0003184 // pulmonary valve morphogenesis // inferred from mutant phenotype /// 0003281 // ventricular septum development // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0007507 // heart development // inferred from mutant phenotype /// 0007612 // learning // inferred from mutant phenotype /// 0007631 // feeding behavior // inferred from mutant phenotype /// 0030324 // lung development // inferred from mutant phenotype /// 0030325 // adrenal gland development // inferred from mutant phenotype /// 0030540 // female genitalia development // inferred from mutant phenotype /// 0042297 // vocal learning // inferred from mutant phenotype /// 0043583 // ear development // inferred from mutant phenotype /// 0043585 // nose morphogenesis // inferred from mutant phenotype /// 0048286 // lung alveolus development // inferred from mutant phenotype /// 0048520 // positive regulation of behavior // inferred from mutant phenotype /// 0048546 // digestive tract morphogenesis // inferred from mutant phenotype /// 0048566 // embryonic digestive tract development // inferred from mutant phenotype /// 0048589 // developmental growth // inferred from mutant phenotype /// 0048745 // smooth muscle tissue development // inferred from mutant phenotype /// 0048844 // artery morphogenesis // inferred from mutant phenotype /// 0050890 // cognition // inferred from mutant phenotype /// 0050905 // neuromuscular process // inferred from mutant phenotype /// 0060322 // head development // inferred from mutant phenotype /// 0060323 // head morphogenesis // inferred from mutant phenotype /// 0060325 // face morphogenesis // inferred from mutant phenotype /// 0060426 // lung vasculature development // inferred from mutant phenotype /// 0060539 // diaphragm development // inferred from mutant phenotype /// 0060900 // embryonic camera-type eye formation // inferred from mutant phenotype /// 0061029 // eyelid development in camera-type eye // inferred from mutant phenotype /// 0061038 // uterus morphogenesis // inferred from mutant phenotype /// 0061143 // alveolar primary septum development // inferred from mutant phenotype /// 0061156 // pulmonary artery morphogenesis // inferred from mutant phenotype /// 0061205 // paramesonephric duct development // inferred from mutant phenotype","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0004872 // receptor activity // inferred from electronic annotation","chr15:74471809-74501371 (-) // 98.94 // q24.1"]
["11753634_a_at",46.25251,63.74578,65.75774,44.372337,51.821552,58.36691,-0.24981976,0.21297836,0.25780916,-0.30969095,-0.08579922,0.08579922,0.71878445,0.4234127,1.1304414,0.17688625,1.1304414,"up","MED24",9862,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016573 // histone acetylation // inferred from electronic annotation /// 0030518 // intracellular steroid hormone receptor signaling pathway // inferred from direct assay /// 0030521 // androgen receptor signaling pathway // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0051291 // protein heterooligomerization // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016592 // mediator complex // non-traceable author statement /// 0016592 // mediator complex // inferred from electronic annotation","0001104 // RNA polymerase II transcription cofactor activity // inferred from direct assay /// 0003712 // transcription cofactor activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // non-traceable author statement /// 0042809 // vitamin D receptor binding // non-traceable author statement /// 0046966 // thyroid hormone receptor binding // inferred from direct assay","chr17:38175381-38209868 (-) // 91.84 // q21.1"]
["11749610_a_at",491.23074,411.76913,450.73074,504.11752,488.32114,441.60873,0.066352844,-0.1882124,-0.057782173,0.10371208,0.057782173,-0.08727932,0.7137014,0.4159538,-1.0604075,-0.08461881,1.0604075,"down","CD58",965,"0007155 // cell adhesion // non-traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0016337 // cell-cell adhesion // non-traceable author statement /// 0050900 // leukocyte migration // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:117064059-117113661 (-) // 97.12 // p13.1"]
["11761354_at",99.79099,91.78166,106.21597,96.884445,90.17715,105.990654,0.02132225,-0.09938145,0.11134148,-0.021322727,-0.124825,0.1082778,0.92854017,0.8071598,1.0165756,0.023717472,1.0165756,"up","LOC100289409",100289409,"","","","chr9:140475535-140476950 (+) // 100.0 // q34.3"]
["11763027_x_at",121.75071,135.35649,155.36545,137.84914,134.81473,141.738,-0.16599703,-0.013163567,0.18573856,0.01316309,-0.018949032,0.053299427,0.9649277,0.9019016,-1.009503,-0.0136452075,1.009503,"down","HFE",3077,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // inferred from electronic annotation /// 0006461 // protein complex assembly // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006826 // iron ion transport // traceable author statement /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0006898 // receptor-mediated endocytosis // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0007565 // female pregnancy // inferred from electronic annotation /// 0010106 // cellular response to iron ion starvation // inferred from electronic annotation /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0042446 // hormone biosynthetic process // inferred from electronic annotation /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0060586 // multicellular organismal iron ion homeostasis // inferred from electronic annotation","0005737 // cytoplasm // traceable author statement /// 0005769 // early endosome // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from direct assay /// 0042612 // MHC class I protein complex // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation /// 0045178 // basal part of cell // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0055037 // recycling endosome // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr6:26091323-26096817 (+) // 93.73 // p22.2"]
["11740048_a_at",17.658537,16.464256,19.851364,21.230581,19.42384,15.328906,-0.06873131,-0.16975975,0.10014105,0.19704676,0.06873131,-0.2728424,0.92470264,0.798994,-1.0307982,-0.043761916,1.0307982,"down","ZNF461",92283,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:37128282-37157755 (-) // 89.38 // q13.12"]
["11723752_s_at",6.829884,8.347396,6.667749,6.9291177,6.4675655,6.7606106,0.0073537827,0.29681897,-0.02730751,0.028164387,-0.07128453,-0.0073537827,0.6755049,0.36467794,1.078565,0.10911313,1.078565,"up","MEOX2",4223,"0001525 // angiogenesis // inferred from electronic annotation /// 0001757 // somite specification // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008015 // blood circulation // traceable author statement /// 0060021 // palate development // inferred from electronic annotation /// 0060173 // limb development // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr7:15650838-15726435 (-) // 96.29 // p21.2"]
["11730786_a_at",170.21196,139.34354,150.43286,163.25983,173.83107,152.07213,0.11136961,-0.17731667,-0.06684303,0.051207066,0.14172316,-0.051207066,0.7134009,0.41570643,-1.0654807,-0.09150447,1.0654807,"down","KLHL20",27252,"0007010 // cytoskeleton organization // traceable author statement /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0035455 // response to interferon-alpha // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0015629 // actin cytoskeleton // traceable author statement /// 0016605 // PML body // inferred from direct assay /// 0031463 // Cul3-RING ubiquitin ligase complex // inferred from direct assay /// 0044444 // cytoplasmic part // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0019964 // interferon-gamma binding // inferred from direct assay","chr1:173684051-173755960 (+) // 99.12 // q25.1"]
["11744350_a_at",4417.4126,4155.2803,3987.13,6129.6733,5779.0186,5576.524,-0.16808224,-0.25633812,-0.31593323,0.30452633,0.2195406,0.16808224,0.044432618,0.001229704,-1.3923297,-0.47750086,1.3923297,"down","RPS27L",51065,"0006281 // DNA repair // inferred from mutant phenotype /// 0006412 // translation // inferred from direct assay /// 0006412 // translation // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0031571 // mitotic cell cycle G1/S transition DNA damage checkpoint // inferred from mutant phenotype /// 0042771 // DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis // inferred from direct assay /// 0045727 // positive regulation of translation // inferred from direct assay /// 0045768 // positive regulation of anti-apoptosis // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005840 // ribosome // inferred from electronic annotation /// 0022627 // cytosolic small ribosomal subunit // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008494 // translation activator activity // inferred from direct assay /// 0008656 // cysteine-type endopeptidase activator activity involved in apoptotic process // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:63446051-63449678 (-) // 76.62 // q22.2"]
["11758531_x_at",473.15762,438.96576,446.9662,491.77692,478.2442,471.0561,0.0032110214,-0.10500145,-0.078944206,0.058894157,0.018637657,-0.0032110214,0.33581784,0.08506434,-1.0607014,-0.08501854,1.0607014,"down","GALE",2582,"0005975 // carbohydrate metabolic process // traceable author statement /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006012 // galactose metabolic process // inferred from electronic annotation /// 0019388 // galactose catabolic process // inferred from direct assay /// 0019388 // galactose catabolic process // traceable author statement /// 0044237 // cellular metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003978 // UDP-glucose 4-epimerase activity // not recorded /// 0003978 // UDP-glucose 4-epimerase activity // inferred from direct assay /// 0003978 // UDP-glucose 4-epimerase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0016857 // racemase and epimerase activity, acting on carbohydrates and derivatives // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0050662 // coenzyme binding // inferred from electronic annotation","chr1:24122099-24122669 (-) // 95.95 // p36.11"]
["11735614_at",13.154204,13.596235,13.791913,11.87388,12.929397,12.293591,0.012434483,0.06011772,0.08073306,-0.13529778,-0.012434483,-0.08518314,0.21390823,0.034861043,1.0933335,0.12873352,1.0933335,"up","EGR4",1961,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:73518061-73520833 (-) // 99.0 // p13.1"]
["11753635_x_at",199.40297,211.09859,201.73822,197.4467,201.1299,198.83797,-0.0062203407,0.07600975,0.010577202,-0.020443916,0.006219864,-0.010313511,0.573688,0.25379992,1.0245341,0.03496801,1.0245341,"up","MED24",9862,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016573 // histone acetylation // inferred from electronic annotation /// 0030518 // intracellular steroid hormone receptor signaling pathway // inferred from direct assay /// 0030521 // androgen receptor signaling pathway // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0051291 // protein heterooligomerization // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016592 // mediator complex // non-traceable author statement /// 0016592 // mediator complex // inferred from electronic annotation","0001104 // RNA polymerase II transcription cofactor activity // inferred from direct assay /// 0003712 // transcription cofactor activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // non-traceable author statement /// 0042809 // vitamin D receptor binding // non-traceable author statement /// 0046966 // thyroid hormone receptor binding // inferred from direct assay","chr17:38175381-38209868 (-) // 91.84 // q21.1"]
["11753963_x_at",4538.23,4296.056,4223.8896,4710.137,4645.643,4594.4824,-0.008886337,-0.088002205,-0.11244297,0.044753075,0.024864197,0.008887291,0.2392178,0.04351684,-1.0687655,-0.09594537,1.0687655,"down","LAMP1",3916,"0006914 // autophagy // inferred from electronic annotation /// 0048102 // autophagic cell death // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005764 // lysosome // traceable author statement /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0005770 // late endosome // inferred from electronic annotation /// 0005771 // multivesicular body // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031982 // vesicle // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0042599 // lamellar body // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","","chr13:113951555-113977740 (+) // 94.16 // q34"]
["11747262_s_at",357.49023,367.74747,340.2263,340.46567,372.8104,311.38293,0.035197258,0.0760088,-0.036211967,-0.035197258,0.09573555,-0.16401672,0.77662766,0.5075493,1.0420979,0.059490852,1.0420979,"up","RRAS2",22800,"0006184 // GTP catabolic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // inferred from electronic annotation /// 0009987 // cellular process // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // non-traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation","chr11:14300227-14386052 (-) // 99.53 // p15.2"]
["11757933_s_at",380.93713,344.54367,347.77533,490.72736,445.7573,421.45966,-0.0729208,-0.21778679,-0.20431805,0.29244804,0.15378475,0.0729208,0.13064788,0.012865838,-1.2640554,-0.33805966,1.2640554,"down","BTG2",7832,"0006281 // DNA repair // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006479 // protein methylation // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0008306 // associative learning // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010243 // response to organic nitrogen // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0021542 // dentate gyrus development // inferred from electronic annotation /// 0021954 // central nervous system neuron development // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0045768 // positive regulation of anti-apoptosis // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051602 // response to electrical stimulus // inferred from electronic annotation /// 0060213 // positive regulation of nuclear-transcribed mRNA poly(A) tail shortening // inferred from direct assay /// 2000178 // negative regulation of neural precursor cell proliferation // inferred from electronic annotation","","0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation","chr1:203278301-203278727 (+) // 98.38 // q32.1"]
["11755047_a_at",834.4983,554.8894,513.376,875.3742,511.1924,519.22015,0.6366358,0.047926903,-0.06425762,0.7056265,-0.070406914,-0.047926903,0.991514,0.9753752,1.0076567,0.011004199,1.0076567,"up","NPLOC4",55666,"0006944 // cellular membrane fusion // inferred from sequence or structural similarity /// 0006944 // cellular membrane fusion // inferred from electronic annotation /// 0007030 // Golgi organization // inferred from sequence or structural similarity /// 0007030 // Golgi organization // inferred from electronic annotation /// 0030433 // ER-associated protein catabolic process // inferred from sequence or structural similarity /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0042175 // nuclear outer membrane-endoplasmic reticulum membrane network // inferred from sequence or structural similarity","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:79523914-79539134 (-) // 91.87 // q25.3"]
["11718613_a_at",58.303764,60.495342,63.431446,63.141117,73.395805,77.565994,-0.11829996,-0.06506491,0.003308773,-0.003308773,0.21380901,0.29353523,0.3148689,0.07520009,-1.171235,-0.22803053,1.171235,"down","ABCD4",5826,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0055085 // transmembrane transport // non-traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation /// 0005778 // peroxisomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043190 // ATP-binding cassette (ABC) transporter complex // non-traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // non-traceable author statement /// 0042626 // ATPase activity, coupled to transmembrane movement of substances // inferred from electronic annotation","chr14:74751979-74769767 (-) // 94.11 // q24.3"]
["11736184_a_at",10.203345,10.806749,11.039798,12.603499,11.520266,11.083004,-0.11648893,-0.03359866,-0.0028173923,0.18829322,0.058642864,0.0028176308,0.37541953,0.106214955,-1.097499,-0.13421965,1.097499,"down","FSCB",84075,"0018105 // peptidyl-serine phosphorylation // inferred from electronic annotation","0005929 // cilium // inferred from electronic annotation /// 0019861 // flagellum // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0044442 // microtubule-based flagellum part // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr14:44973355-44976728 (-) // 99.09 // q21.2"]
["11734390_a_at",64.96863,68.143745,69.120445,63.083,72.400154,63.37497,-0.03441906,0.034419537,0.05494976,-0.07691145,0.12183046,-0.07024956,0.8925493,0.723725,1.0187219,0.02676032,1.0187219,"up","ABLIM2",84448,"0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0030016 // myofibril // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0003779 // actin binding // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:7967036-8160559 (-) // 96.11 // p16.1"]
["11732037_a_at",445.7231,436.73654,464.65247,427.13895,447.51785,411.38986,0.0146923065,-0.0146923065,0.07469654,-0.04675007,0.020489693,-0.10094929,0.5114199,0.19987774,1.0477555,0.06730206,1.0477555,"up","PTPN12",5782,"0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0002102 // podosome // inferred from electronic annotation /// 0005625 // soluble fraction // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004726 // non-membrane spanning protein tyrosine phosphatase activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from physical interaction","chr7:77167351-77269388 (+) // 99.01 // q11.23"]
["11730362_a_at",16.515854,13.755102,14.653809,14.878162,14.34085,16.264704,0.16161585,-0.102268696,-0.010960102,0.0109603405,-0.042105198,0.13950872,0.94343966,0.8424731,-1.013954,-0.019992264,1.013954,"down","KIAA1107",23285,"","","","chr1:92632608-92650284 (+) // 98.67 // p22.1"]
["11716191_at",208.2558,205.71553,193.7105,360.90274,350.41644,314.30377,-0.29690123,-0.31460714,-0.40135622,0.4963522,0.4538126,0.2969017,0.028804839,0.00039304508,-1.6856563,-0.7533104,1.6856563,"down","C15orf44",81556,"","0005737 // cytoplasm // inferred from direct assay","","chr15:65871094-65903486 (-) // 98.53 // q22.31"]
["11742708_a_at",243.71945,205.75694,189.9484,336.79773,251.35112,242.71509,0.0029788017,-0.24130154,-0.35663557,0.46963978,0.047461033,-0.0029792786,0.38883758,0.11426289,-1.2920781,-0.3696933,1.2920781,"down","P4HTM",54681,"0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005506 // iron ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from electronic annotation /// 0031418 // L-ascorbic acid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:49027340-49044548 (+) // 97.5 // p21.31"]
["11740584_x_at",113.36137,106.73809,105.59539,105.23603,93.15739,84.56286,0.10484123,0.017987251,0.0024585724,-0.0024590492,-0.17834568,-0.31799173,0.3594866,0.09780627,1.1551081,0.20802785,1.1551081,"up","PACRGL",133015,"","","","chr4:20702035-20729979 (+) // 83.56 // p15.31"]
["11740925_a_at",18.432535,20.942543,18.019646,19.272703,17.736017,21.399605,-0.032152176,0.15202999,-0.064836025,0.032152176,-0.087724686,0.18317747,0.93706733,0.826591,-1.016907,-0.024187712,1.016907,"down","FAM151B",167555,"","","","chr5:79783799-79838381 (+) // 99.3 // q14.1"]
["11753900_x_at",5363.2124,5262.895,5237.6255,4573.8823,4506.0977,4542.861,0.1319313,0.10469055,0.09774685,-0.09774685,-0.11928749,-0.107564926,0.015009494,5.5017623e-5,1.1644559,0.21965599,1.1644559,"up","MT2A",4502,"0006878 // cellular copper ion homeostasis // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0035690 // cellular response to drug // inferred from direct assay /// 0036016 // cellular response to interleukin-3 // inferred from expression pattern /// 0036018 // cellular response to erythropoietin // inferred from expression pattern /// 0045926 // negative regulation of growth // inferred from sequence or structural similarity /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0071294 // cellular response to zinc ion // inferred from expression pattern","0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity","0005515 // protein binding // inferred from physical interaction /// 0008144 // drug binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:56642564-56643409 (+) // 79.71 // q12.2"]
["11753591_x_at",1846.0726,1531.6588,1514.661,1635.5153,1198.7903,1394.1401,0.27741432,0.008049965,-0.008049965,0.10270023,-0.34546566,-0.12766933,0.5655292,0.24622694,1.1614683,0.21594973,1.1614683,"up","PRR13",54458,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003723 // RNA binding // inferred from electronic annotation","chr12:53837173-53839992 (+) // 90.77 // q13.13 /// chr19:40448992-40449588 (-) // 93.12 // q13.2"]
["11739141_a_at",34.770523,34.84942,37.662376,35.0948,39.447548,36.670753,-0.045078754,-0.041809082,0.070180416,-0.031686306,0.13699198,0.031686306,0.7419523,0.45566168,-1.0361502,-0.051233172,1.0361502,"down","LILRB5",10990,"0006952 // defense response // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement","chr19:54754270-54761472 (-) // 87.64 // q13.42"]
["11749804_a_at",9.892623,8.764075,8.503319,8.735046,9.015191,8.522398,0.17714453,0.0023932457,-0.041182756,-0.002393484,0.043149233,-0.037949085,0.80654883,0.5576302,1.0318139,0.04518273,1.0318139,"up","CELF6",60677,"0000381 // regulation of alternative nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation","chr15:72578245-72598656 (-) // 91.43 // q23"]
["11745984_a_at",1117.7234,870.38367,906.90234,1290.4165,956.7597,883.3903,0.26293945,-0.09790039,-0.038604736,0.47021294,0.038604736,-0.07650089,0.8503692,0.6377263,-1.0732311,-0.10196076,1.0732311,"down","SRRM1",10250,"0000375 // RNA splicing, via transesterification reactions // traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr1:24970049-24999158 (+) // 92.44 // p36.11"]
["11763697_s_at",128.92174,83.758545,94.16353,142.29733,105.51337,95.612564,0.360147,-0.2620411,-0.093108654,0.50255966,0.07107687,-0.07107687,0.8013276,0.5486254,-1.12183,-0.16585405,1.12183,"down","SNHG9 /// SNORA78","677844 /// 735301","","","","chr16:2014976-2015505 (+) // 63.57 // p13.3"]
["11715160_x_at",8.360472,8.074172,8.660372,8.885317,8.857638,9.542385,-0.06709123,-0.11736131,-0.016246557,0.020747662,0.016246557,0.12367439,0.27564996,0.057618905,-1.0870783,-0.1204559,1.0870783,"down","LOC650293",650293,"0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr4:8951476-8952127 (+) // 100.0 // p16.1 /// chr4:9485511-9486162 (+) // 96.01 // p16.1 /// chr3:129740611-129741262 (-) // 95.39 // q22.1"]
["11763408_x_at",19.488409,18.055029,20.185776,17.53183,13.332374,15.568206,0.13142776,0.021212101,0.18215036,-0.021212101,-0.416255,-0.19258595,0.2818213,0.060243905,1.2497282,0.32161435,1.2497282,"up","ANKRD36BP2",645784,"","","","chr2:89065418-89106133 (+) // 90.38 // p11.2"]
["11740844_s_at",21.594755,24.485704,23.889683,29.93793,25.850403,21.594755,-0.16348267,0.017776012,-0.017776012,0.30781078,0.09602308,-0.16348267,0.7107085,0.41200805,-1.097797,-0.13461135,1.097797,"down","VWDE",221806,"","0005576 // extracellular region // inferred from electronic annotation","","chr7:12370508-12443852 (-) // 100.0 // p21.3"]
["11736577_a_at",110.88952,108.162476,127.895164,97.176414,86.08583,93.556206,0.1131835,0.077260494,0.31902266,-0.07726097,-0.2520914,-0.13203382,0.17810108,0.023927093,1.2514647,0.3236176,1.2514647,"up","IRAK1BP1",134728,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007249 // I-kappaB kinase/NF-kappaB cascade // inferred from sequence or structural similarity /// 0007249 // I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","","chr6:79577188-79608320 (+) // 97.06 // q14.1"]
["11751497_a_at",84.48771,92.10524,81.4139,86.69852,77.61451,96.88275,-0.018632889,0.10590935,-0.07209921,0.018632889,-0.14104843,0.17886543,0.9653012,0.90331316,-1.0095816,-0.013757473,1.0095816,"down","TMEM180",79847,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr10:104221159-104239484 (+) // 96.78 // q24.32"]
["11752223_x_at",134.08347,126.95132,133.95221,155.61543,149.82823,141.39343,-0.03829193,-0.11714697,-0.0397048,0.17656231,0.12188673,0.03829193,0.16583689,0.020822357,-1.1307616,-0.17729482,1.1307616,"down","POLH",5429,"0000731 // DNA synthesis involved in DNA repair // inferred from direct assay /// 0006260 // DNA replication // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006282 // regulation of DNA repair // traceable author statement /// 0006290 // pyrimidine dimer repair // inferred from electronic annotation /// 0006301 // postreplication repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0010225 // response to UV-C // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // traceable author statement /// 0003887 // DNA-directed DNA polymerase activity // inferred from electronic annotation /// 0003887 // DNA-directed DNA polymerase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:43543921-43582460 (+) // 95.21 // p21.1"]
["11730140_at",8.912558,10.321677,10.02813,10.643834,11.776982,11.207633,-0.23393631,-0.022170305,-0.06379509,0.022170067,0.16812229,0.09663391,0.27872697,0.05894487,-1.150512,-0.202276,1.150512,"down","LGALS13",29124,"0006644 // phospholipid metabolic process // traceable author statement /// 0016042 // lipid catabolic process // inferred from electronic annotation","","0004091 // carboxylesterase activity // inferred from electronic annotation /// 0004622 // lysophospholipase activity // inferred from electronic annotation /// 0004622 // lysophospholipase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr19:40093159-40098114 (+) // 92.5 // q13.2"]
["11728581_at",20.4331,26.79597,23.44567,18.913486,25.044756,25.950665,-0.24600697,0.14510107,-0.047593594,-0.35750008,0.047593594,0.09885645,0.9695675,0.9148947,1.0145572,0.020850265,1.0145572,"up","ZNF497",162968,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:58865722-58874120 (-) // 78.05 // q13.43"]
["11727219_a_at",333.06583,428.8384,411.46982,533.6269,622.14,647.77277,-0.5223255,-0.15769863,-0.21734619,0.15769863,0.37910652,0.43735504,0.124232635,0.011597451,-1.5409751,-0.62384355,1.5409751,"down","DSE",29940,"0006334 // nucleosome assembly // inferred from electronic annotation /// 0015012 // heparan sulfate proteoglycan biosynthetic process // inferred from electronic annotation /// 0030206 // chondroitin sulfate biosynthetic process // inferred from electronic annotation /// 0030208 // dermatan sulfate biosynthetic process // inferred from direct assay","0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016853 // isomerase activity // inferred from electronic annotation /// 0047757 // chondroitin-glucuronate 5-epimerase activity // inferred from direct assay /// 0047757 // chondroitin-glucuronate 5-epimerase activity // inferred from electronic annotation","chr6:116601233-116759879 (+) // 96.85 // q22.1"]
["11753964_x_at",2018.4159,2017.0953,2127.151,2140.8086,2152.9324,1981.9847,-0.037849426,-0.038793564,0.037849426,0.0470829,0.05523014,-0.06412697,0.8339043,0.60760516,-1.0179452,-0.025659855,1.0179452,"down","HSPH1",10808,"0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // traceable author statement /// 0045345 // positive regulation of MHC class I biosynthetic process // traceable author statement /// 0051085 // chaperone mediated protein folding requiring cofactor // inferred from electronic annotation /// 0051135 // positive regulation of NK T cell activation // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0043014 // alpha-tubulin binding // inferred from electronic annotation","chr13:31710764-31736525 (-) // 99.66 // q12.3"]
["11755549_a_at",38.053246,31.139612,34.869823,35.749096,39.114624,39.36972,0.045056343,-0.24421215,-0.080984116,-0.045056343,0.08474493,0.09412336,0.53599054,0.2200948,-1.1003664,-0.13798393,1.1003664,"down","SEMA6D",80031,"0006501 // C-terminal protein lipidation // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0016254 // preassembly of GPI anchor in ER membrane // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0030215 // semaphorin receptor binding // inferred from electronic annotation","chr15:48058309-48064407 (+) // 99.51 // q21.1"]
["11726007_s_at",6.6057024,7.9845214,7.6715584,7.250853,7.437767,7.7188525,-0.1934824,0.080011606,0.022325277,-0.059043646,-0.022325039,0.031191826,0.95905596,0.8832185,-1.0095108,-0.013656281,1.0095108,"down","DPY19L2 /// DPY19L2P1","283417 /// 554236","0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007286 // spermatid development // inferred from mutant phenotype /// 0030154 // cell differentiation // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:63952692-64062417 (-) // 98.71 // q14.2"]
["11755604_x_at",19557.314,18983.742,18834.434,18708.76,18740.422,18634.334,0.05794525,0.015001297,0.0036096573,-0.006049156,-0.0036096573,-0.011799812,0.4024001,0.12239769,1.0229046,0.03267165,1.0229046,"up","RPL7A /// SNORD24 /// SNORD36A /// SNORD36B","26814 /// 26815 /// 26820 /// 6130","0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement","0005624 // membrane fraction // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0042788 // polysomal ribosome // inferred from direct assay","0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr9:136216864-136218280 (+) // 97.01 // q34.2 /// chr14:70351998-70352485 (-) // 88.25 // q24.2 /// chr18:36914780-36915264 (-) // 88.05 // q12.2"]
["11717101_a_at",269.64844,191.47209,180.7451,317.00653,206.76201,188.33627,0.4385271,-0.05541849,-0.13859606,0.6719599,0.055418015,-0.079241276,0.86698586,0.67006886,-1.0977437,-0.13454132,1.0977437,"down","SLC38A1",81539,"0001504 // neurotransmitter uptake // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006865 // amino acid transport // traceable author statement /// 0006865 // amino acid transport // inferred from electronic annotation /// 0006868 // glutamine transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0015804 // neutral amino acid transport // non-traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation","0005283 // sodium:amino acid symporter activity // non-traceable author statement /// 0015175 // neutral amino acid transmembrane transporter activity // non-traceable author statement /// 0015186 // L-glutamine transmembrane transporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation","chr12:46576837-46663220 (-) // 93.32 // q13.11"]
["11746469_x_at",365.20428,265.49393,281.36444,425.64847,320.97897,276.3494,0.28124428,-0.17878056,-0.09501934,0.502203,0.09501934,-0.12096596,0.79348636,0.5359268,-1.1144027,-0.1562706,1.1144027,"down","DARS",1615,"0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006418 // tRNA aminoacylation for protein translation // inferred from electronic annotation /// 0006422 // aspartyl-tRNA aminoacylation // inferred from electronic annotation /// 0006422 // aspartyl-tRNA aminoacylation // traceable author statement /// 0006461 // protein complex assembly // traceable author statement /// 0010467 // gene expression // traceable author statement","0005625 // soluble fraction // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004046 // aminoacylase activity // traceable author statement /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004815 // aspartate-tRNA ligase activity // inferred from electronic annotation /// 0004815 // aspartate-tRNA ligase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation","chr2:136664253-136743117 (-) // 92.94 // q21.3"]
["11730223_a_at",97.2401,112.29153,102.70085,85.88956,100.49022,121.01116,-0.063127995,0.14449787,0.015696526,-0.24219704,-0.015696526,0.25238895,0.94098663,0.8364501,1.0239819,0.034190256,1.0239819,"up","PNPLA2",57104,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010891 // negative regulation of sequestering of triglyceride // inferred from direct assay /// 0010891 // negative regulation of sequestering of triglyceride // inferred from electronic annotation /// 0010898 // positive regulation of triglyceride catabolic process // inferred from direct assay /// 0010898 // positive regulation of triglyceride catabolic process // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0019433 // triglyceride catabolic process // inferred from electronic annotation","0005811 // lipid particle // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004806 // triglyceride lipase activity // inferred from sequence or structural similarity /// 0004806 // triglyceride lipase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0050253 // retinyl-palmitate esterase activity // inferred from electronic annotation","chr11:818900-825573 (+) // 97.51 // p15.5"]
["11747504_a_at",44.496113,56.813812,41.65656,51.22685,47.69322,54.698376,-0.15166283,0.20090008,-0.24679852,0.051558018,-0.051558018,0.14615583,0.75889707,0.48111546,-1.0826541,-0.114572406,1.0826541,"down","ZNF510",22869,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:99520365-99540398 (-) // 91.69 // q22.33"]
["11754660_a_at",11.169307,12.353972,10.80215,12.022219,10.996161,11.6007,-0.02733612,0.11809945,-0.07555723,0.07882762,-0.049875736,0.027336359,0.9474022,0.8527483,-1.0095372,-0.013694101,1.0095372,"down","GOLT1A",127845,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:204167290-204183110 (-) // 93.22 // q32.1"]
["11736487_at",128.3568,143.4357,145.61172,109.47683,109.3884,110.76278,0.10634327,0.2665882,0.28831005,-0.12319088,-0.12435675,-0.10634327,0.07736796,0.0042139837,1.2643338,0.33837745,1.2643338,"up","RASGEF1B",153020,"0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005088 // Ras guanyl-nucleotide exchange factor activity // inferred from direct assay","chr4:82348176-82393069 (-) // 98.93 // q21.21"]
["11741817_a_at",6.7475734,5.9146953,7.250672,6.3422017,7.8653846,6.9283047,-0.01906681,-0.20913172,0.08467913,-0.10845184,0.20208168,0.01906681,0.79056525,0.5306913,-1.0609858,-0.08540535,1.0609858,"down","SLC12A5",57468,"0006810 // transport // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from electronic annotation /// 0006873 // cellular ion homeostasis // non-traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007612 // learning // inferred from electronic annotation /// 0015696 // ammonium transport // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0040040 // thermosensory behavior // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0051452 // intracellular pH reduction // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0032590 // dendrite membrane // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation","0015293 // symporter activity // inferred from electronic annotation /// 0015377 // cation:chloride symporter activity // inferred from electronic annotation /// 0015379 // potassium:chloride symporter activity // inferred from electronic annotation /// 0015379 // potassium:chloride symporter activity // non-traceable author statement /// 0051739 // ammonia transmembrane transporter activity // inferred from electronic annotation","chr20:44650328-44688789 (+) // 98.22 // q13.12"]
["11731253_a_at",1169.1785,1005.12006,960.44385,1107.3357,986.27655,942.0972,0.2317791,0.013651848,-0.051942825,0.15337658,-0.013651848,-0.07976818,0.88533735,0.70720255,1.0313332,0.04451052,1.0313332,"up","C16orf13",84326,"","","","chr16:684429-686366 (-) // 85.2 // p13.3"]
["11758045_s_at",310.1481,293.88855,324.751,292.8998,346.14807,272.75452,0.03884411,-0.03884411,0.105220795,-0.04370594,0.19727612,-0.14651012,0.91727215,0.781036,1.0229391,0.032720238,1.0229391,"up","KIAA1804",84451,"0000165 // MAPK cascade // inferred from electronic annotation /// 0000186 // activation of MAPKK activity // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from sequence or structural similarity","","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004709 // MAP kinase kinase kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity","chr1:233520499-233521070 (+) // 98.95 // q42.2"]
["11743422_a_at",181.41495,161.69492,169.01268,173.22467,136.19897,125.605255,0.13408995,-0.031929016,0.03192854,0.06744146,-0.2794876,-0.3963065,0.47011307,0.16848479,1.1871322,0.24748065,1.1871322,"up","BAG4",9530,"0006457 // protein folding // traceable author statement /// 0006916 // anti-apoptosis // traceable author statement /// 0010763 // positive regulation of fibroblast migration // inferred from electronic annotation /// 0030838 // positive regulation of actin filament polymerization // inferred from electronic annotation /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from electronic annotation /// 0045785 // positive regulation of cell adhesion // inferred from electronic annotation /// 0051496 // positive regulation of stress fiber assembly // inferred from electronic annotation /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0071356 // cellular response to tumor necrosis factor // inferred from direct assay /// 0071364 // cellular response to epidermal growth factor stimulus // inferred from electronic annotation /// 0072659 // protein localization in plasma membrane // inferred from electronic annotation /// 0097178 // ruffle assembly // inferred from electronic annotation /// 2001145 // negative regulation of phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay","0005057 // receptor signaling protein activity // traceable author statement /// 0051087 // chaperone binding // inferred from electronic annotation","chr8:38034105-38070819 (+) // 83.7 // p11.23"]
["11734486_a_at",17.303715,16.58377,13.251805,17.436415,21.453697,20.354013,-0.005510807,-0.06682062,-0.39040375,0.005510807,0.30463362,0.22872066,0.34354427,0.08911558,-1.260387,-0.33386672,1.260387,"down","WFDC8",90199,"0010466 // negative regulation of peptidase activity // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr20:44180400-44207965 (-) // 81.89 // q13.12"]
["11726849_at",6.8563876,7.7159424,8.523626,7.5489597,7.1341147,6.9262867,-0.09805751,0.0723362,0.21596098,0.040771723,-0.040771723,-0.08342409,0.70510167,0.40375462,1.0652716,0.091221325,1.0652716,"up","SHC4",399694,"0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0019904 // protein domain specific binding // inferred from electronic annotation /// 0030971 // receptor tyrosine kinase binding // inferred from electronic annotation","chr15:49115931-49255662 (-) // 95.64 // q21.1"]
["11722718_a_at",96.7583,99.02476,93.06088,87.222885,93.07325,96.76328,0.028009415,0.061413288,-0.028200626,-0.12166929,-0.028009415,0.028083801,0.6172311,0.29738805,1.0431445,0.06093897,1.0431445,"up","BAIAP2",10458,"0007165 // signal transduction // inferred from electronic annotation /// 0007409 // axonogenesis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0009617 // response to bacterium // inferred from mutant phenotype /// 0016358 // dendrite development // inferred from electronic annotation /// 0032956 // regulation of actin cytoskeleton organization // inferred from mutant phenotype /// 0046847 // filopodium assembly // inferred from electronic annotation /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0051017 // actin filament bundle assembly // inferred from electronic annotation","0001726 // ruffle // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0030175 // filopodium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // traceable author statement /// 0008093 // cytoskeletal adaptor activity // inferred from electronic annotation /// 0008093 // cytoskeletal adaptor activity // traceable author statement /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0070064 // proline-rich region binding // inferred from direct assay","chr17:79008946-79084378 (+) // 98.74 // q25.3"]
["11751529_a_at",20.241535,19.757427,20.141523,21.089205,20.962461,23.21546,-0.025244713,-0.060168266,-0.032390594,0.03394127,0.025244713,0.17252254,0.3158092,0.07571876,-1.0841047,-0.116504036,1.0841047,"down","TF",7018,"0002576 // platelet degranulation // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006826 // iron ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0006879 // cellular iron ion homeostasis // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0033572 // transferrin transport // traceable author statement /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005769 // early endosome // inferred from direct assay /// 0005770 // late endosome // inferred from direct assay /// 0005905 // coated pit // inferred from direct assay /// 0009925 // basal plasma membrane // inferred from direct assay /// 0010008 // endosome membrane // traceable author statement /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from direct assay /// 0030139 // endocytic vesicle // inferred from direct assay /// 0030141 // secretory granule // traceable author statement /// 0045178 // basal part of cell // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0055037 // recycling endosome // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008199 // ferric iron binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:133465076-133474655 (+) // 98.02 // q22.1"]
["11748428_a_at",170.89964,162.40437,163.5058,167.31839,167.1645,169.06195,0.031217575,-0.042341232,-0.032589912,0.0006637573,-0.0006632805,0.015620232,0.73838276,0.45004806,-1.0138035,-0.019778024,1.0138035,"down","PGS1",9489,"0006655 // phosphatidylglycerol biosynthetic process // inferred from sequence or structural similarity /// 0006655 // phosphatidylglycerol biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0032049 // cardiolipin biosynthetic process // inferred from sequence or structural similarity /// 0046339 // diacylglycerol metabolic process // inferred from sequence or structural similarity","0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0008444 // CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity // inferred from sequence or structural similarity /// 0008444 // CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016780 // phosphotransferase activity, for other substituted phosphate groups // inferred from electronic annotation","chr17:76374742-76420638 (+) // 95.23 // q25.3"]
["11730053_a_at",8.9868,8.599801,10.549106,9.02431,8.311613,7.368142,0.03175211,-0.03175211,0.26299357,0.03776121,-0.08092713,-0.25475454,0.5170934,0.20440866,1.1383715,0.18697141,1.1383715,"up","SNX16",64089,"0006622 // protein targeting to lysosome // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0008333 // endosome to lysosome transport // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0045022 // early endosome to late endosome transport // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005770 // late endosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031313 // extrinsic to endosome membrane // inferred from direct assay /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","0008289 // lipid binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from direct assay /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction","chr8:82711819-82754534 (-) // 97.34 // q21.13"]
["11728943_at",8.060092,10.201119,8.566273,7.2982564,8.271705,8.002806,-0.018694162,0.32116485,0.06917691,-0.16193867,0.018694162,-0.028984547,0.500045,0.19097781,1.1338991,0.18129225,1.1338991,"up","ZNF404",342908,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:44376514-44384355 (-) // 94.06 // q13.31"]
["11736931_s_at",441.21454,472.64056,469.81155,418.23914,438.92194,445.8805,-0.0075883865,0.091674805,0.083013535,-0.08474064,-0.015104294,0.0075883865,0.3810736,0.109743975,1.0617559,0.08645212,1.0617559,"up","FAM72A /// FAM72B /// FAM72D","653820 /// 728833 /// 729533","","","","chr1:206138454-206155147 (+) // 96.15 // q32.1 /// chr1:120838982-120855680 (+) // 95.74 // p11.2 /// chr1:143896451-143913145 (-) // 95.7 // q21.1"]
["11727185_at",47.71936,41.606293,53.06891,38.41372,46.038116,45.232956,0.06447315,-0.13329983,0.21776533,-0.24847984,0.012727261,-0.012727261,0.6797167,0.37008405,1.096171,0.1324729,1.096171,"up","CCDC164",92749,"","","","chr2:26624779-26679579 (+) // 92.46 // p23.3"]
["11742191_a_at",162.73897,188.31934,183.68155,153.36751,176.60825,196.14465,-0.14632034,0.06430149,0.028326988,-0.23188686,-0.028326988,0.12303829,0.9384796,0.83031094,1.019476,0.027827892,1.019476,"up","LOC100506403 /// RUNX1","100506403 /// 861","0001501 // skeletal system development // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0002318 // myeloid progenitor cell differentiation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0009966 // regulation of signal transduction // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from direct assay /// 0030097 // hemopoiesis // traceable author statement /// 0030099 // myeloid cell differentiation // inferred from direct assay /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0030853 // negative regulation of granulocyte differentiation // inferred from mutant phenotype /// 0030854 // positive regulation of granulocyte differentiation // inferred from mutant phenotype /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0035162 // embryonic hemopoiesis // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048266 // behavioral response to pain // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation /// 0048935 // peripheral nervous system neuron development // traceable author statement /// 0060216 // definitive hemopoiesis // inferred from electronic annotation /// 0071336 // regulation of hair follicle cell proliferation // inferred from electronic annotation /// 0071425 // hemopoietic stem cell proliferation // traceable author statement","0005604 // basement membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000975 // regulatory region DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0070491 // repressing transcription factor binding // inferred from electronic annotation","chr21:36160097-36421595 (-) // 94.77 // q22.12"]
["11718505_s_at",1782.8301,1722.0751,1711.1984,2318.8894,2121.3232,1816.6497,-0.013555527,-0.0635767,-0.07271767,0.3657093,0.23723984,0.013555527,0.3052494,0.07089744,-1.1937093,-0.2554515,1.1937093,"down","SRSF10",10772,"0000244 // assembly of spliceosomal tri-snRNP // non-traceable author statement /// 0000375 // RNA splicing, via transesterification reactions // inferred from direct assay /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006376 // mRNA splice site selection // inferred from direct assay /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // non-traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0016482 // cytoplasmic transport // inferred from direct assay /// 0048025 // negative regulation of nuclear mRNA splicing, via spliceosome // inferred from direct assay","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0050733 // RS domain binding // non-traceable author statement /// 0051082 // unfolded protein binding // non-traceable author statement","chr1:24290836-24306885 (-) // 85.86 // p36.11 /// chr1_gl000191_random:34172-50213 (-) // 85.84 //"]
["11745642_at",9.82271,9.601467,10.123951,9.132089,10.083248,10.990095,-0.018883705,-0.051749945,0.024695635,-0.124060154,0.018883705,0.14312696,0.9030455,0.745239,-1.0195714,-0.027962843,1.0195714,"down",-0.124060154,0.018883705,0.14312696,-0.018883705,-0.051749945,0.024695635]
["11723900_a_at",145.86351,146.86246,167.02002,127.85438,130.94753,118.576996,0.077815056,0.08766222,0.27321672,-0.1123023,-0.077815056,-0.22098017,0.16685377,0.02106151,1.2169449,0.2832639,1.2169449,"up","KIAA2018",205717,"","0005634 // nucleus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0004571 // mannosyl-oligosaccharide 1,2-alpha-mannosidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation","chr3:113367231-113415493 (-) // 92.86 // q13.2"]
["11740912_a_at",24.946922,24.065674,22.141293,21.278042,22.727013,22.368143,0.14593506,0.09404993,-0.02618742,-0.08356142,0.011481285,-0.011481285,0.46608916,0.16526137,1.0711197,0.09911966,1.0711197,"up","BANK1",55024,"0042113 // B cell activation // inferred from electronic annotation","","","chr4:102711763-102995967 (+) // 96.99 // q24"]
["11750271_a_at",51.88809,52.034824,50.394165,54.44161,47.732704,53.224983,-0.0020370483,0.0020370483,-0.04418373,0.067269325,-0.12246227,0.0346632,0.96502614,0.90244937,-1.0054802,-0.007884629,1.0054802,"down","PANX2",56666,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0007267 // cell-cell signaling // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0034214 // protein hexamerization // inferred from sequence or structural similarity","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005921 // gap junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005243 // gap junction channel activity // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0055077 // gap junction hemi-channel activity // inferred from sequence or structural similarity","chr22:50609189-50618032 (+) // 99.6 // q13.33"]
["11755858_a_at",7.018159,6.9222074,7.876446,6.5173473,6.5952787,6.398997,0.05475974,0.034899235,0.22121215,-0.052047968,-0.034899235,-0.07848716,0.27736166,0.05831878,1.1163338,0.15876853,1.1163338,"up","MS4A1",931,"0006955 // immune response // traceable author statement /// 0042113 // B cell activation // inferred from electronic annotation","0005730 // nucleolus // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005154 // epidermal growth factor receptor binding // inferred from electronic annotation","chr11:60223319-60237529 (+) // 88.88 // q12.2"]
["11720548_at",322.85626,311.7932,314.59583,251.52182,235.4713,248.22734,0.20525551,0.154953,0.16786289,-0.154953,-0.25008583,-0.17397451,0.02773738,0.00035321008,1.2914827,0.3690283,1.2914827,"up","HNRNPUL2",221092,"","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation","chr11:62481387-62494933 (-) // 93.64 // q12.3"]
["11742751_a_at",25.274836,23.229462,24.36809,24.634693,26.717829,24.634693,0.037010193,-0.08473587,-0.015698433,0,0.117111206,0,0.63447237,0.316382,-1.0425947,-0.06017839,1.0425947,"down","ITIH3",3699,"0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // traceable author statement /// 0030212 // hyaluronan metabolic process // inferred from electronic annotation","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation","0004866 // endopeptidase inhibitor activity // traceable author statement /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr3:52828809-52843025 (+) // 98.85 // p21.1"]
["11745143_a_at",250.67986,216.36478,239.72289,200.65515,209.03519,233.37991,0.15777254,-0.05460739,0.09329414,-0.16335583,-0.10432768,0.054606915,0.51863015,0.20589812,1.0992442,0.13651197,1.0992442,"up","SYNE2",23224,"0006998 // nuclear envelope organization // inferred from electronic annotation /// 0007097 // nuclear migration // inferred from mutant phenotype /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0010761 // fibroblast migration // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from sequence or structural similarity /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031022 // nuclear migration along microfilament // inferred from sequence or structural similarity /// 0031022 // nuclear migration along microfilament // inferred from electronic annotation /// 0034504 // protein localization to nucleus // inferred from electronic annotation /// 0051642 // centrosome localization // inferred from mutant phenotype /// 0051642 // centrosome localization // inferred from electronic annotation /// 0090286 // cytoskeletal anchoring at nuclear membrane // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005640 // nuclear outer membrane // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016529 // sarcoplasmic reticulum // inferred from direct assay /// 0016529 // sarcoplasmic reticulum // inferred from electronic annotation /// 0030016 // myofibril // inferred from electronic annotation /// 0030018 // Z disc // inferred from direct assay /// 0030018 // Z disc // inferred from electronic annotation /// 0031258 // lamellipodium membrane // inferred from direct assay /// 0031527 // filopodium membrane // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay /// 0031981 // nuclear lumen // inferred from direct assay /// 0033017 // sarcoplasmic reticulum membrane // inferred from electronic annotation /// 0034993 // SUN-KASH complex // inferred from direct assay /// 0044429 // mitochondrial part // inferred from direct assay","0003779 // actin binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction","chr14:64319709-64427595 (+) // 82.41 // q23.2"]
["11743159_x_at",6.0069213,6.094572,5.603157,6.038781,6.6352944,6.5669036,-0.014265299,0.0066337585,-0.1146512,-0.0066337585,0.12926936,0.114322186,0.37028348,0.10369479,-1.0865442,-0.119746804,1.0865442,"down","FGG",2266,"0002576 // platelet degranulation // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0007596 // blood coagulation // inferred from electronic annotation /// 0007599 // hemostasis // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030168 // platelet activation // inferred from electronic annotation /// 0051258 // protein polymerization // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from direct assay","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005577 // fibrinogen complex // inferred from electronic annotation /// 0005577 // fibrinogen complex // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005938 // cell cortex // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0031091 // platelet alpha granule // inferred from direct assay /// 0031093 // platelet alpha granule lumen // traceable author statement","0005102 // receptor binding // inferred from electronic annotation /// 0030674 // protein binding, bridging // inferred from electronic annotation /// 0043499 // eukaryotic cell surface binding // inferred from direct assay","chr4:155525732-155533902 (-) // 99.55 // q31.3"]
["11757377_a_at",25.068699,19.117174,19.924236,28.788471,28.704775,22.6742,0.072417736,-0.31860018,-0.258945,0.27202177,0.2678213,-0.072417736,0.40532097,0.123836145,-1.2519563,-0.32418424,1.2519563,"down","DNAH14",127602,"0007018 // microtubule-based movement // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0030286 // dynein complex // inferred from electronic annotation /// 0035085 // cilium axoneme // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr1:225576157-225587057 (+) // 93.16 // q42.12"]
["11758516_s_at",97.15833,75.74242,92.86307,140.92264,107.45069,101.87598,-0.0342021,-0.39343834,-0.09943485,0.5022917,0.111063,0.034201622,0.36011782,0.09814876,-1.3117964,-0.39154384,1.3117964,"down","PTCD3",55037,"","0005739 // mitochondrion // inferred from electronic annotation","","chr2:86366899-86367349 (+) // 91.56 // p11.2"]
["11718336_x_at",26.71457,20.872417,26.392899,23.796312,31.41291,35.81872,0.008738518,-0.34729052,-0.008738518,-0.1581502,0.24246931,0.43182564,0.55939573,0.24048844,-1.2207872,-0.2878117,1.2207872,"down","LMOD1",25802,"0006936 // muscle contraction // traceable author statement","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005523 // tropomyosin binding // inferred from electronic annotation","chr1:201865583-201915792 (-) // 90.85 // q32.1"]
["11733406_a_at",118.49727,131.95493,132.29451,123.38958,138.01122,147.00713,-0.15704536,-0.0018539429,0.0018544197,-0.09867859,0.06288624,0.15398645,0.67863137,0.36826897,-1.0656594,-0.09174641,1.0656594,"down","CLDN19",149461,"0007601 // visual perception // inferred from electronic annotation /// 0016338 // calcium-independent cell-cell adhesion // inferred from sequence or structural similarity /// 0019227 // neuronal action potential propagation // inferred from electronic annotation /// 0043297 // apical junction assembly // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from direct assay /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0043296 // apical junction complex // inferred from direct assay","0005198 // structural molecule activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from sequence or structural similarity","chr1:43198760-43205925 (-) // 85.88 // p34.2"]
["11756280_a_at",1170.9991,1242.3733,1211.8802,1262.3849,1307.2728,1248.931,-0.08915615,-0.0037975311,-0.03964901,0.019255638,0.069664,0.0037975311,0.31872624,0.07716914,-1.0534389,-0.07510664,1.0534389,"down","NUDT5",11164,"0006139 // nucleobase-containing compound metabolic process // inferred from electronic annotation /// 0009117 // nucleotide metabolic process // non-traceable author statement /// 0009191 // ribonucleoside diphosphate catabolic process // inferred from direct assay /// 0009191 // ribonucleoside diphosphate catabolic process // traceable author statement /// 0019303 // D-ribose catabolic process // non-traceable author statement","0005622 // intracellular // non-traceable author statement","0000287 // magnesium ion binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017110 // nucleoside-diphosphatase activity // inferred from electronic annotation /// 0019144 // ADP-sugar diphosphatase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047631 // ADP-ribose diphosphatase activity // inferred from electronic annotation","chr10:12209628-12238128 (-) // 99.47 // p13"]
["11739892_a_at",133.70302,112.631454,100.08801,133.496,103.069885,95.13543,0.3114152,0.063993454,-0.106347084,0.30918026,-0.06399298,-0.17956114,0.90063274,0.7404138,1.0481257,0.06781181,1.0481257,"up","ARPC4-TTLL3 /// TTLL3","100526693 /// 26140","0006464 // cellular protein modification process // inferred from electronic annotation /// 0018094 // protein polyglycylation // inferred from direct assay /// 0030041 // actin filament polymerization // inferred from electronic annotation /// 0035082 // axoneme assembly // inferred from sequence or structural similarity /// 0042384 // cilium assembly // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005929 // cilium // inferred from sequence or structural similarity /// 0005929 // cilium // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from sequence or structural similarity /// 0035085 // cilium axoneme // inferred from sequence or structural similarity /// 0035085 // cilium axoneme // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0004835 // tubulin-tyrosine ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0070735 // protein-glycine ligase activity // inferred from direct assay /// 0070736 // protein-glycine ligase activity, initiating // inferred from sequence or structural similarity","chr3:9851671-9878042 (+) // 84.87 // p25.3"]
["11750735_a_at",39.0599,42.566,40.516895,44.894707,38.84262,39.81103,-0.040157795,0.08385563,0.0126776695,0.16069937,-0.048205376,-0.0126776695,0.9480859,0.85413146,-1.0100875,-0.014480259,1.0100875,"down","COMP",1311,"0001501 // skeletal system development // traceable author statement /// 0003417 // growth plate cartilage development // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0009887 // organ morphogenesis // traceable author statement /// 0060173 // limb development // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay","0005201 // extracellular matrix structural constituent // traceable author statement /// 0005509 // calcium ion binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from direct assay /// 0008201 // heparin binding // inferred from direct assay /// 0008201 // heparin binding // inferred from electronic annotation /// 0043395 // heparan sulfate proteoglycan binding // inferred from direct assay","chr19:18893583-18902114 (-) // 99.83 // p13.11"]
["11740044_x_at",438.23456,402.9042,415.3229,427.5073,387.48834,394.6562,0.099368095,-0.02189827,0.02189827,0.06361389,-0.07818222,-0.05173874,0.6875186,0.3809788,1.0390211,0.055225,1.0390211,"up","MTFMT",123263,"0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0071951 // conversion of methionyl-tRNA to N-formyl-methionyl-tRNA // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004479 // methionyl-tRNA formyltransferase activity // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016742 // hydroxymethyl-, formyl- and related transferase activity // inferred from electronic annotation","chr15:65293850-65321976 (-) // 65.72 // q22.31"]
["11732704_a_at",187.17067,142.5562,150.64174,216.44289,141.62079,141.10912,0.3530283,-0.0397954,0.0397954,0.56265974,-0.04929304,-0.054514885,0.9610426,0.88905436,-1.0247518,-0.0352745,1.0247518,"down","FGFRL1",53834,"0001501 // skeletal system development // inferred from electronic annotation /// 0001558 // regulation of cell growth // non-traceable author statement /// 0003179 // heart valve morphogenesis // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0060412 // ventricular septum morphogenesis // inferred from electronic annotation /// 0060539 // diaphragm development // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from direct assay /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from electronic annotation /// 0008201 // heparin binding // inferred from direct assay /// 0017134 // fibroblast growth factor binding // inferred from electronic annotation","chr4:1004939-1020686 (+) // 78.35 // p16.3"]
["11729412_x_at",670.0055,557.2865,525.9936,750.4409,590.88934,586.37805,0.18681335,-0.07894039,-0.16231441,0.350379,0.00552845,-0.00552845,0.73044145,0.43924087,-1.0980473,-0.13494015,1.0980473,"down","C9orf142",286257,"","","","chr9:139886894-139888439 (+) // 85.3 // q34.3"]
["11751166_a_at",37.971478,34.08129,43.17906,37.565456,40.382935,38.95432,-0.01843357,-0.17436981,0.16698217,-0.033943176,0.07039595,0.01843357,0.92854017,0.80712974,-1.0188223,-0.02690246,1.0188223,"down","TRIM5",85363,"0009615 // response to virus // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0070206 // protein trimerization // inferred from direct assay","0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:5686479-5701462 (-) // 80.7 // p15.4"]
["11730283_at",40.2242,36.450294,38.858994,46.4026,48.880608,45.806103,-0.09373808,-0.23587132,-0.14355326,0.11240387,0.18746042,0.09373808,0.080269374,0.0046312567,-1.2217268,-0.28892168,1.2217268,"down","SMU1",55234,"","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","","chr9:33041761-33076718 (-) // 77.43 // p21.1"]
["11742022_s_at",23.022474,13.83616,14.120589,18.812208,14.72871,18.557177,0.47773886,-0.2568605,-0.22750378,0.18636513,-0.16667318,0.16667318,0.93444216,0.8208222,-1.0455993,-0.06433014,1.0455993,"down","IKZF1",10320,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001779 // natural killer cell differentiation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007498 // mesoderm development // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0030183 // B cell differentiation // inferred from electronic annotation /// 0030217 // T cell differentiation // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0040018 // positive regulation of multicellular organism growth // inferred from electronic annotation /// 0045660 // positive regulation of neutrophil differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048535 // lymph node development // inferred from electronic annotation /// 0048538 // thymus development // inferred from electronic annotation /// 0048541 // Peyer's patch development // inferred from electronic annotation /// 0048732 // gland development // inferred from electronic annotation /// 0051138 // positive regulation of NK T cell differentiation // inferred from electronic annotation /// 0060041 // retina development in camera-type eye // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005721 // centromeric heterochromatin // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr7:50344377-50472799 (+) // 96.31 // p12.2"]
["11732579_s_at",7.1379547,7.0698314,9.97502,7.4117804,9.072283,8.696873,-0.1696477,-0.18348265,0.3131616,-0.115338326,0.17630744,0.11533809,0.8897221,0.7178912,-1.05124,-0.072092034,1.05124,"down","ZNF880",400713,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:52873179-52889048 (+) // 98.09 // q13.41"]
["11715166_at",151.3141,128.9611,144.55943,134.98439,150.64313,121.09527,0.11531925,-0.11529112,0.04943514,-0.049434662,0.1089077,-0.20608473,0.8290692,0.5967888,1.0463448,0.06535828,1.0463448,"up","DNAJC12",56521,"0006457 // protein folding // inferred from electronic annotation","","0031072 // heat shock protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr10:69570967-69597937 (-) // 99.11 // q21.3"]
["11743546_a_at",510.807,555.87885,568.5563,568.3924,554.9617,550.55615,-0.12080097,0.0011911392,0.03372383,0.03330803,-0.0011911392,-0.01268959,0.780363,0.5135131,-1.024631,-0.03510448,1.024631,"down","MYO1B",4430,"0030048 // actin filament-based movement // inferred from sequence or structural similarity /// 0051017 // actin filament bundle assembly // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005903 // brush border // inferred from sequence or structural similarity /// 0005903 // brush border // inferred from electronic annotation /// 0016459 // myosin complex // inferred from electronic annotation /// 0030175 // filopodium // inferred from sequence or structural similarity /// 0071944 // cell periphery // inferred from sequence or structural similarity","0000146 // microfilament motor activity // inferred from sequence or structural similarity /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from sequence or structural similarity /// 0005547 // phosphatidylinositol-3,4,5-trisphosphate binding // inferred from sequence or structural similarity","chr2:192110125-192290102 (+) // 96.44 // q32.3"]
["11734935_a_at",110.81068,113.82602,113.97193,114.2229,112.50019,114.24937,-0.039657593,-0.0009241104,0.0009241104,0.0040979385,-0.01782751,0.0044312477,0.79608214,0.54050696,-1.0070392,-0.010119827,1.0070392,"down","ARID5A",10865,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement","chr2:97202463-97218370 (+) // 96.4 // q11.2"]
["11753333_x_at",1836.4232,1801.0922,1685.2715,1667.499,1485.1571,1536.5203,0.1315651,0.10353851,0.0076475143,-0.0076475143,-0.1747179,-0.12566662,0.23497717,0.041850027,1.1357099,0.18359435,1.1357099,"up","RTN3",10313,"0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0071786 // endoplasmic reticulum tubular network organization // inferred from mutant phenotype","0000139 // Golgi membrane // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:63448971-63526015 (+) // 100.0 // q13.1 /// chr4:146296557-146297750 (+) // 96.88 // q31.21"]
["11750568_a_at",8.923937,9.666815,9.363061,9.031207,8.718734,8.618519,-0.00861907,0.10674143,0.060680866,0.0086193085,-0.042180777,-0.05885935,0.36282635,0.09943947,1.0597627,0.08374128,1.0597627,"up","SALL1",6299,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001657 // ureteric bud development // inferred from sequence or structural similarity /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0001658 // branching involved in ureteric bud morphogenesis // inferred from sequence or structural similarity /// 0001822 // kidney development // inferred from mutant phenotype /// 0001843 // neural tube closure // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from sequence or structural similarity /// 0003281 // ventricular septum development // inferred from electronic annotation /// 0003337 // mesenchymal to epithelial transition involved in metanephros morphogenesis // inferred from expression pattern /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007507 // heart development // inferred from mutant phenotype /// 0008406 // gonad development // inferred from expression pattern /// 0016575 // histone deacetylation // inferred from sequence or structural similarity /// 0021553 // olfactory nerve development // inferred from sequence or structural similarity /// 0021553 // olfactory nerve development // inferred from electronic annotation /// 0021772 // olfactory bulb development // inferred from electronic annotation /// 0021889 // olfactory bulb interneuron differentiation // inferred from sequence or structural similarity /// 0021915 // neural tube development // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from expression pattern /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from direct assay /// 0030325 // adrenal gland development // inferred from expression pattern /// 0031129 // inductive cell-cell signaling // inferred from sequence or structural similarity /// 0031129 // inductive cell-cell signaling // inferred from electronic annotation /// 0035136 // forelimb morphogenesis // inferred from electronic annotation /// 0035137 // hindlimb morphogenesis // inferred from electronic annotation /// 0042473 // outer ear morphogenesis // inferred from mutant phenotype /// 0042733 // embryonic digit morphogenesis // inferred from mutant phenotype /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045879 // negative regulation of smoothened signaling pathway // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048566 // embryonic digestive tract development // inferred from mutant phenotype /// 0060173 // limb development // inferred from mutant phenotype /// 0061034 // olfactory bulb mitral cell layer development // inferred from mutant phenotype /// 0072073 // kidney epithelium development // inferred from sequence or structural similarity /// 0072092 // ureteric bud invasion // inferred from sequence or structural similarity /// 0072092 // ureteric bud invasion // inferred from electronic annotation /// 2000177 // regulation of neural precursor cell proliferation // inferred from electronic annotation","0000792 // heterochromatin // inferred from direct assay /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0010369 // chromocenter // inferred from direct assay /// 0016581 // NuRD complex // inferred from sequence or structural similarity /// 0016581 // NuRD complex // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0004407 // histone deacetylase activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:51170584-51185181 (-) // 98.92 // q12.1"]
["11735343_at",17.631214,15.561718,14.243671,15.836853,17.875872,17.698645,0.077423096,-0.102707386,-0.23038769,-0.077423334,0.09730482,0.08293009,0.6378284,0.32023177,-1.0863541,-0.119494475,1.0863541,"down","SOX3",6658,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007417 // central nervous system development // traceable author statement /// 0007423 // sensory organ development // inferred from sequence or structural similarity /// 0007423 // sensory organ development // inferred from electronic annotation /// 0007530 // sex determination // inferred from mutant phenotype /// 0007530 // sex determination // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0021854 // hypothalamus development // inferred from sequence or structural similarity /// 0021854 // hypothalamus development // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from sequence or structural similarity /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from sequence or structural similarity /// 0048515 // spermatid differentiation // inferred from electronic annotation /// 0060009 // Sertoli cell development // inferred from electronic annotation /// 0060324 // face development // inferred from sequence or structural similarity /// 0060324 // face development // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from sequence or structural similarity /// 0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from electronic annotation /// 0001106 // RNA polymerase II transcription corepressor activity // inferred from sequence or structural similarity /// 0001106 // RNA polymerase II transcription corepressor activity // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chrX:139585151-139587281 (-) // 87.4 // q27.1"]
["11727453_a_at",962.0559,1019.0658,993.3614,998.4615,890.79065,885.56415,-0.023098946,0.059955597,0.023098946,0.03048706,-0.13413334,-0.14262295,0.4734813,0.17094022,1.0733161,0.10207502,1.0733161,"up","C17orf79",55352,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0043985 // histone H4-R3 methylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0042393 // histone binding // inferred from direct assay","chr17:30178883-30186356 (-) // 89.87 // q11.2"]
["11750768_a_at",37.20888,29.998003,32.501656,34.053593,30.318045,31.647774,0.2143383,-0.09644222,0.019204617,0.08649826,-0.081131935,-0.019204617,0.85736394,0.65093356,1.0354896,0.050313007,1.0354896,"up","OSBPL6",114880,"0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation","","0005543 // phospholipid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation","chr2:179059226-179247502 (+) // 98.97 // q31.2"]
["11730575_at",11.044719,11.490319,9.52989,12.166608,13.739185,12.811246,-0.09831643,-0.041254044,-0.3111415,0.041254044,0.2166233,0.115737915,0.24739525,0.04661684,-1.209806,-0.27477568,1.209806,"down","ZNF470",388566,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:57078879-57094261 (+) // 67.41 // q13.43"]
["11716820_x_at",17.578085,17.15373,16.666508,17.132727,16.594818,16.834229,0.04970169,0.014446259,-0.027124405,0.012678623,-0.033343315,-0.012678623,0.7138373,0.4161197,1.016391,0.02345556,1.016391,"up","PRSS1",5644,"0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // inferred from direct assay /// 0007586 // digestion // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030307 // positive regulation of cell growth // traceable author statement /// 0030574 // collagen catabolic process // inferred from direct assay /// 0030574 // collagen catabolic process // inferred from mutant phenotype /// 0045087 // innate immune response // traceable author statement /// 0045785 // positive regulation of cell adhesion // traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005576 // extracellular region // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // inferred from mutant phenotype /// 0031012 // extracellular matrix // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // traceable author statement /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from direct assay /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:142457317-142460922 (+) // 96.33 // q34"]
["11720929_a_at",426.72296,321.22223,335.8895,264.63815,245.34601,259.3048,0.5495033,0.13977528,0.20419025,-0.13977528,-0.24897861,-0.16914749,0.1669812,0.021130782,1.3984126,0.48379007,1.3984126,"up","DLST",1743,"0006091 // generation of precursor metabolites and energy // traceable author statement /// 0006099 // tricarboxylic acid cycle // traceable author statement /// 0006099 // tricarboxylic acid cycle // inferred from electronic annotation /// 0006103 // 2-oxoglutarate metabolic process // inferred from electronic annotation /// 0006554 // lysine catabolic process // traceable author statement /// 0006734 // NADH metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0033512 // L-lysine catabolic process to acetyl-CoA via saccharopine // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005792 // microsome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045252 // oxoglutarate dehydrogenase complex // inferred from electronic annotation","0004149 // dihydrolipoyllysine-residue succinyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0031072 // heat shock protein binding // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from electronic annotation","chr14:75348595-75370443 (+) // 98.64 // q24.3"]
["11762503_at",12.033138,10.885001,13.778132,13.235605,13.744061,14.771412,-0.16460323,-0.30927467,0.030763865,-0.027192116,0.027192354,0.13119149,0.4502399,0.1536796,-1.1418991,-0.19143519,1.1418991,"down","GPR126",57211,"0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement","chr6:142726824-142764664 (+) // 65.95 // q24.1"]
["11728191_x_at",390.88916,368.88837,359.99872,496.05597,510.0559,477.08633,-0.14374542,-0.22732067,-0.26251316,0.1999979,0.24015045,0.14374542,0.037763942,0.00083504117,-1.3248457,-0.4058243,1.3248457,"down","CXCR4",7852,"0000187 // activation of MAPK activity // traceable author statement /// 0001569 // patterning of blood vessels // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from expression pattern /// 0001667 // ameboidal cell migration // inferred from electronic annotation /// 0001764 // neuron migration // inferred from electronic annotation /// 0002407 // dendritic cell chemotaxis // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // traceable author statement /// 0007281 // germ cell development // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from electronic annotation /// 0008354 // germ cell migration // inferred from electronic annotation /// 0009615 // response to virus // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0019059 // initiation of viral infection // traceable author statement /// 0019722 // calcium-mediated signaling // inferred from mutant phenotype /// 0030260 // entry into host cell // traceable author statement /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0042098 // T cell proliferation // inferred from electronic annotation /// 0043217 // myelin maintenance // inferred from sequence or structural similarity /// 0043217 // myelin maintenance // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0048699 // generation of neurons // inferred from electronic annotation /// 0048714 // positive regulation of oligodendrocyte differentiation // inferred from sequence or structural similarity /// 0048714 // positive regulation of oligodendrocyte differentiation // inferred from electronic annotation /// 0050920 // regulation of chemotaxis // inferred from mutant phenotype /// 0061351 // neural precursor cell proliferation // inferred from electronic annotation /// 0070098 // chemokine-mediated signaling pathway // inferred from electronic annotation","0005737 // cytoplasm // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0030426 // growth cone // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from direct assay","0003779 // actin binding // inferred from direct assay /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004950 // chemokine receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015026 // coreceptor activity // traceable author statement /// 0016494 // C-X-C chemokine receptor activity // non-traceable author statement /// 0016494 // C-X-C chemokine receptor activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0032027 // myosin light chain binding // inferred from direct assay /// 0043130 // ubiquitin binding // inferred from direct assay","chr2:136871919-136874273 (-) // 97.21 // q22.1"]
["11718698_at",255.97969,273.3514,249.45306,264.24207,255.22292,262.38953,-0.017839909,0.07688713,-0.055101395,0.027990341,-0.02211237,0.017840385,0.95908535,0.8833421,-1.0045788,-0.006590776,1.0045788,"down","C6orf89",221477,"0042060 // wound healing // inferred from direct assay /// 0045787 // positive regulation of cell cycle // inferred from direct assay /// 0050673 // epithelial cell proliferation // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:36853685-36896740 (+) // 91.22 // p21.2"]
["11726188_at",13.038129,15.561595,14.072588,18.009108,17.431149,16.537426,-0.29912543,-0.043872356,-0.18897486,0.1668644,0.119805336,0.043872356,0.1814879,0.024893304,-1.2205276,-0.28750497,1.2205276,"down","SHISA3",152573,"0007275 // multicellular organismal development // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr4:42399798-42404504 (+) // 98.45 // p13"]
["11751074_x_at",614.6484,528.0333,484.31207,645.582,539.78766,597.223,0.11443043,-0.104701996,-0.22939396,0.18526936,-0.07293892,0.07293892,0.6573002,0.34181738,-1.0980763,-0.13497835,1.0980763,"down","ARHGDIA",396,"0006916 // anti-apoptosis // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0007162 // negative regulation of cell adhesion // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // inferred from electronic annotation /// 0007266 // Rho protein signal transduction // traceable author statement /// 0032880 // regulation of protein localization // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050770 // regulation of axonogenesis // traceable author statement /// 0050771 // negative regulation of axonogenesis // traceable author statement /// 0050772 // positive regulation of axonogenesis // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0001772 // immunological synapse // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement","0005094 // Rho GDP-dissociation inhibitor activity // inferred from electronic annotation /// 0005094 // Rho GDP-dissociation inhibitor activity // traceable author statement /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr17:79825672-79829252 (-) // 97.3 // q25.3"]
["11729181_at",62.393944,56.89027,63.13329,71.75911,62.801136,71.10146,-0.0131902695,-0.14641428,0.0038051605,0.18856573,-0.0038056374,0.17528248,0.3499291,0.09255279,-1.1265781,-0.17194732,1.1265781,"down","DHRSX",207063,"0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0000228 // nuclear chromosome // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004803 // transposase activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chrX:2137546-2419015 (-) // 80.53 // p22.33 /// chrY:2087546-2369015 (-) // 80.53 // p11.32"]
["11721278_s_at",748.6275,661.03625,625.2288,717.81714,640.96356,675.9613,0.16341305,-0.016105652,-0.096450806,0.102781296,-0.06059265,0.016105652,0.9925424,0.97937816,-1.00172,-0.0024792342,1.00172,"down","SUV39H1",6839,"0000183 // chromatin silencing at rDNA // inferred from direct assay /// 0006325 // chromatin organization // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006364 // rRNA processing // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016571 // histone methylation // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0034968 // histone lysine methylation // inferred from direct assay /// 0034968 // histone lysine methylation // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051567 // histone H3-K9 methylation // inferred from direct assay /// 0051567 // histone H3-K9 methylation // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000792 // heterochromatin // inferred from direct assay /// 0000792 // heterochromatin // inferred from electronic annotation /// 0000794 // condensed nuclear chromosome // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005677 // chromatin silencing complex // inferred from direct assay /// 0005677 // chromatin silencing complex // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0033553 // rDNA heterochromatin // inferred from direct assay","0003682 // chromatin binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008757 // S-adenosylmethionine-dependent methyltransferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from direct assay /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0042054 // histone methyltransferase activity // inferred from direct assay /// 0046974 // histone methyltransferase activity (H3-K9 specific) // inferred from direct assay /// 0046974 // histone methyltransferase activity (H3-K9 specific) // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from physical interaction","chrX:48554923-48567407 (+) // 89.98 // p11.23"]
["11751556_a_at",58.415794,57.252518,58.289757,50.341175,46.16315,45.345764,0.121819496,0.09280014,0.118703365,-0.09280014,-0.21779728,-0.24357128,0.07009711,0.0033744427,1.2275915,0.29583058,1.2275915,"up","NUDT13",25961,"","0005739 // mitochondrion // inferred from electronic annotation","0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:74870279-74890700 (+) // 99.91 // q22.1"]
["11715105_at",10.770332,13.5049095,15.583318,17.524298,15.780759,17.056677,-0.54202175,-0.21560049,-0.009082079,0.16027212,0.009082079,0.12125206,0.35396767,0.09467802,-1.2767153,-0.3524368,1.2767153,"down","C17orf78",284099,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr17:35732984-35749660 (+) // 98.15 // q12"]
["11740848_a_at",7.0854626,9.406102,8.570406,8.330941,7.6757264,9.4258,-0.25405955,0.15467548,0.020442009,-0.020442009,-0.13861799,0.15769362,0.9538428,0.86973137,-1.0180854,-0.025858527,1.0180854,"down","SLC30A10",55532,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006829 // zinc ion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008324 // cation transmembrane transporter activity // inferred from electronic annotation","chr1:220087605-220101993 (-) // 98.26 // q41"]
["11731270_a_at",11.993807,13.838913,13.311126,12.667574,13.116743,16.486322,-0.13973117,0.06670952,0.010611534,-0.060880423,-0.010611296,0.31924868,0.7608999,0.48405227,-1.0742941,-0.10338899,1.0742941,"down","MGAM",8972,"0005975 // carbohydrate metabolic process // traceable author statement /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005983 // starch catabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0044245 // polysaccharide digestion // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation","0003824 // catalytic activity // traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004339 // glucan 1,4-alpha-glucosidase activity // inferred from electronic annotation /// 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds // inferred from electronic annotation /// 0004558 // alpha-glucosidase activity // traceable author statement /// 0004558 // alpha-glucosidase activity // inferred from electronic annotation /// 0016160 // amylase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0032450 // maltose alpha-glucosidase activity // inferred from electronic annotation","chr7:141607612-141806547 (+) // 99.51 // q34"]
["11716332_a_at",412.6386,386.5415,365.2888,338.2757,328.89267,301.58136,0.2312603,0.13700485,0.05541897,-0.05541897,-0.096001625,-0.22107124,0.16363908,0.020321129,1.2019626,0.265392,1.2019626,"up","RPL28",6158,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr19:55896712-55903460 (+) // 74.45 // q13.42"]
["11735095_at",7.571888,9.96746,8.92611,8.123655,8.788438,8.851399,-0.22010303,0.17646956,0.017275572,-0.11862707,-0.005149603,0.0051493645,0.9310693,0.8131659,1.0215477,0.030756535,1.0215477,"up","LEP",3952,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001542 // ovulation from ovarian follicle // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001819 // positive regulation of cytokine production // inferred from electronic annotation /// 0001890 // placenta development // inferred from direct assay /// 0001932 // regulation of protein phosphorylation // inferred from electronic annotation /// 0002021 // response to dietary excess // inferred from electronic annotation /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006111 // regulation of gluconeogenesis // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006114 // glycerol biosynthetic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007260 // tyrosine phosphorylation of STAT protein // inferred from electronic annotation /// 0007565 // female pregnancy // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0008206 // bile acid metabolic process // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008343 // adult feeding behavior // inferred from sequence or structural similarity /// 0008343 // adult feeding behavior // inferred from electronic annotation /// 0009062 // fatty acid catabolic process // inferred from electronic annotation /// 0009892 // negative regulation of metabolic process // inferred from electronic annotation /// 0019222 // regulation of metabolic process // inferred from electronic annotation /// 0021954 // central nervous system neuron development // inferred from electronic annotation /// 0030073 // insulin secretion // inferred from electronic annotation /// 0030300 // regulation of intestinal cholesterol absorption // inferred from electronic annotation /// 0032099 // negative regulation of appetite // inferred from sequence or structural similarity /// 0032099 // negative regulation of appetite // inferred from electronic annotation /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0033197 // response to vitamin E // inferred from electronic annotation /// 0033210 // leptin-mediated signaling pathway // inferred from electronic annotation /// 0033686 // positive regulation of luteinizing hormone secretion // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0035630 // bone mineralization involved in bone maturation // inferred from electronic annotation /// 0042307 // positive regulation of protein import into nucleus // inferred from electronic annotation /// 0042445 // hormone metabolic process // inferred from electronic annotation /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from electronic annotation /// 0042755 // eating behavior // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043270 // positive regulation of ion transport // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0045639 // positive regulation of myeloid cell differentiation // inferred from electronic annotation /// 0045906 // negative regulation of vasoconstriction // inferred from electronic annotation /// 0046427 // positive regulation of JAK-STAT cascade // inferred from electronic annotation /// 0046628 // positive regulation of insulin receptor signaling pathway // inferred from electronic annotation /// 0046881 // positive regulation of follicle-stimulating hormone secretion // inferred from electronic annotation /// 0048639 // positive regulation of developmental growth // inferred from direct assay /// 0050796 // regulation of insulin secretion // inferred from electronic annotation /// 0050810 // regulation of steroid biosynthetic process // inferred from electronic annotation /// 0050867 // positive regulation of cell activation // inferred from electronic annotation /// 0050901 // leukocyte tethering or rolling // inferred from electronic annotation /// 0051956 // negative regulation of amino acid transport // inferred from electronic annotation /// 0060587 // regulation of lipoprotein lipid oxidation // inferred from electronic annotation /// 0060612 // adipose tissue development // inferred from electronic annotation /// 0061037 // negative regulation of cartilage development // inferred from electronic annotation /// 0070093 // negative regulation of glucagon secretion // inferred from electronic annotation /// 0071298 // cellular response to L-ascorbic acid // inferred from electronic annotation /// 0071300 // cellular response to retinoic acid // inferred from electronic annotation /// 2000366 // positive regulation of STAT protein import into nucleus // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from sequence or structural similarity /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005622 // intracellular // inferred from electronic annotation","0005179 // hormone activity // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation /// 0051428 // peptide hormone receptor binding // inferred from electronic annotation","chr7:127892041-127897681 (+) // 82.25 // q32.1"]
["11721154_a_at",95.50452,102.22291,101.67438,136.68402,122.0274,116.09307,-0.18985939,-0.091781616,-0.099544525,0.32734394,0.16370487,0.091781616,0.1346764,0.013676219,-1.2494894,-0.32133868,1.2494894,"down","STK3",6788,"0001841 // neural tube formation // inferred from electronic annotation /// 0003157 // endocardium development // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // inferred from direct assay /// 0007417 // central nervous system development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0035329 // hippo signaling cascade // inferred from direct assay /// 0035329 // hippo signaling cascade // traceable author statement /// 0035329 // hippo signaling cascade // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from sequence or structural similarity /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0046621 // negative regulation of organ growth // inferred from electronic annotation /// 0060215 // primitive hemopoiesis // inferred from electronic annotation /// 0060706 // cell differentiation involved in embryonic placenta development // inferred from electronic annotation /// 0071902 // positive regulation of protein serine/threonine kinase activity // inferred from direct assay /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from mutant phenotype /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // not recorded /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0043539 // protein serine/threonine kinase activator activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from sequence or structural similarity","chr8:99466860-99837950 (-) // 97.39 // q22.2"]
["11761389_at",15.197885,18.37368,18.593216,17.719124,19.06269,25.022608,-0.2823379,-0.00856781,0.00856781,-0.060901165,0.044543266,0.43702364,0.5790731,0.2593061,-1.176364,-0.23433447,1.176364,"down","CD3G",917,"0006461 // protein complex assembly // non-traceable author statement /// 0007163 // establishment or maintenance of cell polarity // inferred from mutant phenotype /// 0007166 // cell surface receptor signaling pathway // inferred from mutant phenotype /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0015031 // protein transport // inferred from mutant phenotype /// 0031295 // T cell costimulation // traceable author statement /// 0042110 // T cell activation // non-traceable author statement /// 0042981 // regulation of apoptotic process // inferred from mutant phenotype /// 0050776 // regulation of immune response // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042101 // T cell receptor complex // non-traceable author statement /// 0042105 // alpha-beta T cell receptor complex // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from mutant phenotype /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0030159 // receptor signaling complex scaffold activity // non-traceable author statement /// 0042608 // T cell receptor binding // non-traceable author statement /// 0046982 // protein heterodimerization activity // inferred from physical interaction","chr11:118215058-118220913 (+) // 84.62 // q23.3"]
["11733691_a_at",11.659923,10.211464,9.888506,10.110032,11.101646,11.176493,0.13107634,-0.060292244,-0.10665727,-0.07469392,0.060292006,0.06998563,0.9016288,0.7421667,-1.0213559,-0.030485626,1.0213559,"down","SIGLEC7",27036,"0007155 // cell adhesion // inferred from electronic annotation","0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // traceable author statement","chr19:51645557-51656783 (+) // 84.08 // q13.41"]
["11760793_x_at",44.99877,43.814972,45.680634,43.963135,44.987885,43.825573,0.016970158,-0.021491528,0.038667202,-0.016621113,0.016621113,-0.021142483,0.7268689,0.4345321,1.0128562,0.018429426,1.0128562,"up","TBC1D26",353149,"0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation","chr17:15635596-15647766 (+) // 93.39 // p12"]
["11746697_a_at",2019.5182,1822.7362,1794.6044,3261.2932,3185.433,3255.056,-0.32873917,-0.47664452,-0.49908447,0.3626938,0.32873917,0.35993195,0.020465193,0.00013517051,-1.723424,-0.7852776,1.723424,"down","SLC3A2",6520,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006816 // calcium ion transport // non-traceable author statement /// 0006865 // amino acid transport // traceable author statement /// 0006865 // amino acid transport // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0015804 // neutral amino acid transport // inferred from electronic annotation /// 0015827 // tryptophan transport // inferred from sequence or structural similarity /// 0016049 // cell growth // non-traceable author statement /// 0050900 // leukocyte migration // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0060356 // leucine import // inferred from sequence or structural similarity /// 0060356 // leucine import // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0005432 // calcium:sodium antiporter activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0015175 // neutral amino acid transmembrane transporter activity // inferred from sequence or structural similarity /// 0015175 // neutral amino acid transmembrane transporter activity // inferred from electronic annotation /// 0043169 // cation binding // inferred from electronic annotation","chr11:62648371-62656299 (+) // 95.22 // q12.3"]
["11720207_a_at",79.61217,102.851814,90.4672,95.42762,115.315796,115.87529,-0.3154626,0.054044247,-0.13105631,-0.054044247,0.2190671,0.2260499,0.42664358,0.13762808,-1.1984606,-0.26118246,1.1984606,"down","IL2RG",3561,"0006955 // immune response // traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0035771 // interleukin-4-mediated signaling pathway // traceable author statement /// 0038110 // interleukin-2-mediated signaling pathway // traceable author statement /// 0038111 // interleukin-7-mediated signaling pathway // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004896 // cytokine receptor activity // inferred from electronic annotation /// 0004911 // interleukin-2 receptor activity // traceable author statement /// 0004913 // interleukin-4 receptor activity // traceable author statement /// 0004917 // interleukin-7 receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0019976 // interleukin-2 binding // inferred from sequence or structural similarity","chrX:70327253-70331425 (-) // 90.97 // q13.1"]
["11742554_at",10.761463,11.716851,11.436788,10.799258,11.599126,12.520897,-0.09797454,0.024736166,-0.010167122,-0.09291649,0.010167122,0.12048912,0.83199424,0.60297054,-1.0283859,-0.040381704,1.0283859,"down","OR13C4",138804,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr9:107288533-107289490 (-) // 100.0 // q31.1"]
["11728953_a_at",8.85993,8.877425,11.799394,7.8563714,9.372489,9.40982,-0.041991472,-0.03914547,0.3713541,-0.21542358,0.03914547,0.04488039,0.7268143,0.43441242,1.1023164,0.14053835,1.1023164,"up","GPR98",84059,"0007154 // cell communication // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // non-traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007399 // nervous system development // non-traceable author statement /// 0007601 // visual perception // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from mutant phenotype /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0016337 // cell-cell adhesion // non-traceable author statement /// 0045494 // photoreceptor cell maintenance // inferred from mutant phenotype /// 0048496 // maintenance of organ identity // inferred from mutant phenotype /// 0048839 // inner ear development // inferred from electronic annotation /// 0050877 // neurological system process // inferred from mutant phenotype /// 0050877 // neurological system process // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050910 // detection of mechanical stimulus involved in sensory perception of sound // inferred from electronic annotation /// 0050953 // sensory perception of light stimulus // inferred from mutant phenotype /// 0060122 // inner ear receptor stereocilium organization // inferred from electronic annotation","0002142 // stereocilia ankle link complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // non-traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0017022 // myosin binding // inferred from electronic annotation","chr5:89854616-90460254 (+) // 99.59 // q14.3"]
["11739631_at",12.708438,15.102616,15.478899,11.599964,14.0073595,15.968759,-0.19470501,0.054306746,0.08981085,-0.3263712,-0.054306746,0.13476038,0.88510084,0.7066154,1.0461648,0.065110065,1.0461648,"up","RPGR",6103,"0006886 // intracellular protein transport // traceable author statement /// 0007601 // visual perception // inferred from mutant phenotype /// 0007601 // visual perception // inferred from electronic annotation /// 0030030 // cell projection organization // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from mutant phenotype /// 0042462 // eye photoreceptor cell development // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0001750 // photoreceptor outer segment // inferred from direct assay /// 0005622 // intracellular // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chrX:38143661-38186787 (-) // 70.77 // p11.4"]
["11754755_a_at",254.37537,239.0562,245.5782,247.36043,233.14392,246.76709,0.047293186,-0.04231596,-0.0034837723,0.006948471,-0.078445435,0.0034832954,0.8170482,0.575975,1.0161892,0.023169061,1.0161892,"up","POLR3B",55703,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0006385 // transcription elongation from RNA polymerase III promoter // traceable author statement /// 0006386 // termination of RNA polymerase III transcription // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0032728 // positive regulation of interferon-beta production // inferred from mutant phenotype /// 0045087 // innate immune response // inferred from electronic annotation /// 0045089 // positive regulation of innate immune response // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0032549 // ribonucleoside binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:106830833-106903974 (+) // 96.97 // q23.3"]
["11729284_x_at",36.64762,37.371212,37.161488,36.713734,35.00952,37.43863,-0.01134491,0.016863346,0.00874424,-0.00874424,-0.07731676,0.01946354,0.7160678,0.41881284,1.0188583,0.026953438,1.0188583,"up","MEF2B /// MEF2BNB /// MEF2BNB-MEF2B","100271849 /// 4207 /// 729991","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007507 // heart development // inferred from expression pattern /// 0007517 // muscle organ development // traceable author statement","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr19:19256375-19281098 (-) // 95.2 // p13.11"]
["11754786_s_at",65.78667,74.300385,82.97195,63.611794,86.051636,93.60752,-0.25520134,-0.07962704,0.07962656,-0.30370283,0.13220596,0.25362778,0.8278601,0.5948794,-1.0810583,-0.11244428,1.0810583,"down","MXRA8",54587,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:1288071-1297183 (-) // 93.67 // p36.33"]
["11733755_at",38.433445,45.63679,39.02356,43.052704,40.743874,42.686165,-0.11781359,0.13002157,-0.09583044,0.045928,-0.0335927,0.0335927,0.84690875,0.63020504,-1.030385,-0.04318352,1.030385,"down","PKD2L1",9033,"0001581 // detection of chemical stimulus involved in sensory perception of sour taste // inferred from sequence or structural similarity /// 0001581 // detection of chemical stimulus involved in sensory perception of sour taste // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from sequence or structural similarity /// 0006812 // cation transport // inferred from electronic annotation /// 0035725 // sodium ion transmembrane transport // inferred from direct assay /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from direct assay /// 0071468 // cellular response to acidity // inferred from sequence or structural similarity /// 0071468 // cellular response to acidity // inferred from electronic annotation /// 0071805 // potassium ion transmembrane transport // inferred from direct assay","0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from mutant phenotype /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from sequence or structural similarity /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005216 // ion channel activity // inferred from electronic annotation /// 0005227 // calcium activated cation channel activity // inferred from direct assay /// 0005261 // cation channel activity // inferred from direct assay /// 0005261 // cation channel activity // inferred from electronic annotation /// 0005272 // sodium channel activity // inferred from direct assay /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from physical interaction /// 0008324 // cation transmembrane transporter activity // inferred from sequence or structural similarity /// 0008324 // cation transmembrane transporter activity // inferred from electronic annotation /// 0015269 // calcium-activated potassium channel activity // inferred from direct assay /// 0033040 // sour taste receptor activity // inferred from sequence or structural similarity /// 0033040 // sour taste receptor activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from sequence or structural similarity /// 0042802 // identical protein binding // inferred from electronic annotation /// 0051371 // muscle alpha-actinin binding // inferred from physical interaction /// 0051393 // alpha-actinin binding // inferred from physical interaction","chr10:102047905-102090243 (-) // 94.79 // q24.31"]
["11717222_a_at",103.2031,113.945305,97.78697,101.91484,100.72289,101.15105,0.023548126,0.16640377,-0.054223537,0.005426407,-0.011546612,-0.005426407,0.76539356,0.49085853,1.0346133,0.049091574,1.0346133,"up","EXTL3",2137,"0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0015012 // heparan sulfate proteoglycan biosynthetic process // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031227 // intrinsic to endoplasmic reticulum membrane // inferred from electronic annotation","0001888 // glucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016758 // transferase activity, transferring hexosyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:28457985-28611204 (+) // 96.83 // p21.1"]
["11757517_x_at",440.22284,456.6967,433.05792,403.1837,455.68137,532.76935,-0.024895668,0.02810669,-0.04856968,-0.15169239,0.024895668,0.25038147,0.8618478,0.6595215,-1.039806,-0.056314398,1.039806,"down","POR",5447,"0003420 // regulation of growth plate cartilage chondrocyte proliferation // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0009437 // carnitine metabolic process // inferred from electronic annotation /// 0009812 // flavonoid metabolic process // inferred from electronic annotation /// 0018393 // internal peptidyl-lysine acetylation // inferred from electronic annotation /// 0019395 // fatty acid oxidation // inferred from electronic annotation /// 0032332 // positive regulation of chondrocyte differentiation // inferred from electronic annotation /// 0032770 // positive regulation of monooxygenase activity // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0043602 // nitrate catabolic process // inferred from electronic annotation /// 0045542 // positive regulation of cholesterol biosynthetic process // inferred from electronic annotation /// 0045880 // positive regulation of smoothened signaling pathway // inferred from electronic annotation /// 0046210 // nitric oxide catabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060192 // negative regulation of lipase activity // inferred from electronic annotation /// 0070988 // demethylation // inferred from electronic annotation /// 0071371 // cellular response to gonadotropin stimulus // inferred from electronic annotation /// 0071372 // cellular response to follicle-stimulating hormone stimulus // inferred from electronic annotation /// 0071375 // cellular response to peptide hormone stimulus // inferred from electronic annotation /// 0090031 // positive regulation of steroid hormone biosynthetic process // inferred from electronic annotation /// 0090181 // regulation of cholesterol metabolic process // inferred from electronic annotation /// 0090346 // cellular organofluorine metabolic process // inferred from direct assay","0005624 // membrane fraction // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from direct assay /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0003958 // NADPH-hemoprotein reductase activity // inferred from direct assay /// 0003958 // NADPH-hemoprotein reductase activity // traceable author statement /// 0003958 // NADPH-hemoprotein reductase activity // inferred from electronic annotation /// 0004128 // cytochrome-b5 reductase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0010181 // FMN binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0047726 // iron-cytochrome-c reductase activity // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation /// 0050661 // NADP binding // inferred from electronic annotation","chr7:75615812-75616172 (+) // 89.33 // q11.23"]
["11747400_a_at",419.16663,418.2477,413.2607,485.98325,489.91058,536.49786,-0.10669136,-0.10985756,-0.12716293,0.10669136,0.1183033,0.24935722,0.07660313,0.0041174474,-1.2080564,-0.27268785,1.2080564,"down","COPS7A",50813,"0010388 // cullin deneddylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008180 // signalosome // inferred from direct assay /// 0008180 // signalosome // inferred from electronic annotation","","chr12:6833425-6841000 (+) // 100.0 // p13.31"]
["11718961_a_at",132.08998,122.25427,99.57957,127.22283,106.76804,117.249916,0.14178514,0.030148983,-0.2658143,0.08762169,-0.16525602,-0.03014946,0.99155366,0.97550404,1.0032176,0.0046345317,1.0032176,"up","NUFIP2",57532,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0042788 // polysomal ribosome // inferred from direct assay","0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr17:27582857-27621166 (-) // 94.03 // q11.2"]
["11763683_a_at",679.34784,600.77716,595.0014,639.92804,552.74554,542.15784,0.18428898,0.006968498,-0.006968498,0.09804821,-0.113245964,-0.14114857,0.6273325,0.30859834,1.0818834,0.11354506,1.0818834,"up","ARL6IP4",51329,"0008380 // RNA splicing // traceable author statement","0005634 // nucleus // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr12:123465701-123466268 (+) // 69.12 // q24.31"]
["11729213_a_at",199.62823,186.729,180.07315,215.63016,210.99165,229.69064,-0.039935112,-0.13630438,-0.18866777,0.071308136,0.039935112,0.16244125,0.16308162,0.020199033,-1.1589867,-0.212864,1.1589867,"down","PCBP2",5094,"0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016071 // mRNA metabolic process // non-traceable author statement /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0050687 // negative regulation of defense response to virus // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr12:53845885-53874945 (+) // 91.59 // q13.13"]
["11741847_a_at",5.4201565,6.218395,6.0460267,5.9575768,5.538875,6.3505206,-0.14702201,0.051185846,0.010630846,-0.010630846,-0.115763426,0.08151841,0.95739627,0.87930435,-1.0093616,-0.013443142,1.0093616,"down","C2orf83",56918,"0006810 // transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation","0005542 // folic acid binding // inferred from electronic annotation /// 0008518 // reduced folate carrier activity // inferred from electronic annotation","chr2:228474805-228497888 (-) // 78.57 // q36.3"]
["11756596_a_at",32.28531,34.46264,39.53641,37.123188,39.858246,40.047077,-0.24687338,-0.15271807,0.04543066,-0.04543066,0.057127,0.06394577,0.50996846,0.1987633,-1.1044037,-0.14326768,1.1044037,"down","PDPR",55066,"0006090 // pyruvate metabolic process // traceable author statement /// 0006546 // glycine catabolic process // inferred from electronic annotation /// 0010510 // regulation of acetyl-CoA biosynthetic process from pyruvate // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0004047 // aminomethyltransferase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation","chr16:70154033-70192230 (+) // 94.27 // q22.1"]
["11715930_at",807.83777,793.9918,819.1015,850.0379,844.9248,856.71185,-0.04236698,-0.067308426,-0.022390366,0.031094551,0.022390366,0.042377472,0.090394676,0.0059183394,-1.0540739,-0.07597606,1.0540739,"down","SDHAF2",54949,"0006121 // mitochondrial electron transport, succinate to ubiquinone // inferred from mutant phenotype /// 0018293 // protein-FAD linkage // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr11:61197521-61214985 (+) // 89.99 // q12.2"]
["11735126_at",17.56965,18.792507,18.807726,17.707024,15.793668,16.122686,-0.0056180954,0.09145403,0.0926218,0.0056180954,-0.15935755,-0.12961149,0.28915295,0.063134216,1.1126009,0.1539362,1.1126009,"up","N4BP3",23138,"","0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","","chr5:177540443-177553402 (+) // 89.16 // q35.3"]
["11762111_x_at",120.17927,122.38466,116.556206,95.283585,111.69594,105.24278,0.07488632,0.101121426,0.030724525,-0.26000166,-0.030724525,-0.11658001,0.23792262,0.043002315,1.1524303,0.20467949,1.1524303,"up","EGFL8 /// PPT2 /// PPT2-EGFL8","100532746 /// 80864 /// 9374","0001701 // in utero embryonic development // inferred from sequence or structural similarity /// 0006464 // cellular protein modification process // non-traceable author statement /// 0006464 // cellular protein modification process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005764 // lysosome // non-traceable author statement /// 0005764 // lysosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0016021 // integral to membrane // non-traceable author statement","0005509 // calcium ion binding // inferred from electronic annotation /// 0008474 // palmitoyl-(protein) hydrolase activity // non-traceable author statement /// 0008474 // palmitoyl-(protein) hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016790 // thiolester hydrolase activity // non-traceable author statement","chr6:32121921-32134334 (+) // 99.61 // p21.32"]
["11745398_a_at",69.8855,89.922226,68.466606,51.060177,67.389565,74.05881,0.014796734,0.3784814,-0.014796257,-0.43799782,-0.03767109,0.09847498,0.6057503,0.28595653,1.1907676,0.2518919,1.1907676,"up","NF1",4763,"0000165 // MAPK cascade // inferred from sequence or structural similarity /// 0000165 // MAPK cascade // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from sequence or structural similarity /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001656 // metanephros development // inferred from sequence or structural similarity /// 0001656 // metanephros development // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from sequence or structural similarity /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001889 // liver development // inferred from sequence or structural similarity /// 0001889 // liver development // inferred from electronic annotation /// 0001937 // negative regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001937 // negative regulation of endothelial cell proliferation // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // inferred from electronic annotation /// 0001952 // regulation of cell-matrix adhesion // inferred from sequence or structural similarity /// 0001952 // regulation of cell-matrix adhesion // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // inferred from sequence or structural similarity /// 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0007154 // cell communication // inferred from sequence or structural similarity /// 0007154 // cell communication // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // inferred from sequence or structural similarity /// 0007265 // Ras protein signal transduction // inferred from electronic annotation /// 0007406 // negative regulation of neuroblast proliferation // inferred from sequence or structural similarity /// 0007406 // negative regulation of neuroblast proliferation // inferred from electronic annotation /// 0007420 // brain development // inferred from sequence or structural similarity /// 0007420 // brain development // inferred from electronic annotation /// 0007422 // peripheral nervous system development // inferred from sequence or structural similarity /// 0007422 // peripheral nervous system development // inferred from electronic annotation /// 0007507 // heart development // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008542 // visual learning // inferred from sequence or structural similarity /// 0008542 // visual learning // inferred from electronic annotation /// 0014044 // Schwann cell development // inferred from sequence or structural similarity /// 0014044 // Schwann cell development // inferred from electronic annotation /// 0014065 // phosphatidylinositol 3-kinase cascade // inferred from sequence or structural similarity /// 0014065 // phosphatidylinositol 3-kinase cascade // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from electronic annotation /// 0021510 // spinal cord development // inferred from sequence or structural similarity /// 0021510 // spinal cord development // inferred from electronic annotation /// 0021897 // forebrain astrocyte development // inferred from sequence or structural similarity /// 0021897 // forebrain astrocyte development // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from sequence or structural similarity /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0022011 // myelination in peripheral nervous system // inferred from sequence or structural similarity /// 0022011 // myelination in peripheral nervous system // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from sequence or structural similarity /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from sequence or structural similarity /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030199 // collagen fibril organization // inferred from sequence or structural similarity /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0030325 // adrenal gland development // inferred from sequence or structural similarity /// 0030325 // adrenal gland development // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from mutant phenotype /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0032228 // regulation of synaptic transmission, GABAergic // inferred from electronic annotation /// 0032318 // regulation of Ras GTPase activity // inferred from mutant phenotype /// 0032320 // positive regulation of Ras GTPase activity // inferred from direct assay /// 0032320 // positive regulation of Ras GTPase activity // inferred from mutant phenotype /// 0032320 // positive regulation of Ras GTPase activity // inferred from sequence or structural similarity /// 0032320 // positive regulation of Ras GTPase activity // inferred from electronic annotation /// 0035021 // negative regulation of Rac protein signal transduction // inferred from electronic annotation /// 0042060 // wound healing // inferred from sequence or structural similarity /// 0042060 // wound healing // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042992 // negative regulation of transcription factor import into nucleus // inferred from sequence or structural similarity /// 0042992 // negative regulation of transcription factor import into nucleus // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from sequence or structural similarity /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043407 // negative regulation of MAP kinase activity // inferred from sequence or structural similarity /// 0043407 // negative regulation of MAP kinase activity // inferred from electronic annotation /// 0043409 // negative regulation of MAPK cascade // inferred from mutant phenotype /// 0043409 // negative regulation of MAPK cascade // inferred from sequence or structural similarity /// 0043409 // negative regulation of MAPK cascade // inferred from electronic annotation /// 0043473 // pigmentation // inferred from sequence or structural similarity /// 0043473 // pigmentation // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from sequence or structural similarity /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0043535 // regulation of blood vessel endothelial cell migration // inferred from mutant phenotype /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0045124 // regulation of bone resorption // inferred from sequence or structural similarity /// 0045124 // regulation of bone resorption // inferred from electronic annotation /// 0045685 // regulation of glial cell differentiation // inferred from sequence or structural similarity /// 0045685 // regulation of glial cell differentiation // inferred from electronic annotation /// 0045762 // positive regulation of adenylate cyclase activity // inferred from sequence or structural similarity /// 0045762 // positive regulation of adenylate cyclase activity // inferred from electronic annotation /// 0045765 // regulation of angiogenesis // inferred from mutant phenotype /// 0045765 // regulation of angiogenesis // inferred from electronic annotation /// 0046580 // negative regulation of Ras protein signal transduction // not recorded /// 0046580 // negative regulation of Ras protein signal transduction // inferred from electronic annotation /// 0046929 // negative regulation of neurotransmitter secretion // inferred from electronic annotation /// 0048147 // negative regulation of fibroblast proliferation // inferred from electronic annotation /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048485 // sympathetic nervous system development // inferred from sequence or structural similarity /// 0048485 // sympathetic nervous system development // inferred from electronic annotation /// 0048593 // camera-type eye morphogenesis // inferred from sequence or structural similarity /// 0048593 // camera-type eye morphogenesis // inferred from electronic annotation /// 0048712 // negative regulation of astrocyte differentiation // inferred from electronic annotation /// 0048715 // negative regulation of oligodendrocyte differentiation // inferred from sequence or structural similarity /// 0048715 // negative regulation of oligodendrocyte differentiation // inferred from electronic annotation /// 0048745 // smooth muscle tissue development // inferred from sequence or structural similarity /// 0048745 // smooth muscle tissue development // inferred from electronic annotation /// 0048844 // artery morphogenesis // inferred from sequence or structural similarity /// 0048844 // artery morphogenesis // inferred from electronic annotation /// 0048853 // forebrain morphogenesis // inferred from sequence or structural similarity /// 0048853 // forebrain morphogenesis // inferred from electronic annotation /// 0050890 // cognition // inferred from mutant phenotype /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // not recorded /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030424 // axon // inferred from direct assay /// 0030425 // dendrite // inferred from direct assay /// 0031235 // intrinsic to internal side of plasma membrane // not recorded","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005099 // Ras GTPase activator activity // inferred from direct assay /// 0005099 // Ras GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr17:29421944-29546377 (+) // 90.31 // q11.2"]
["11759489_s_at",34.192303,37.11097,43.54051,35.926582,41.429028,47.056656,-0.19757223,-0.079398155,0.15111446,-0.1261921,0.079398155,0.26315498,0.7682211,0.4949151,-1.0822788,-0.114072256,1.0822788,"down","TXNL1",9352,"0006662 // glycerol ether metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0045454 // cell redox homeostasis // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0009055 // electron carrier activity // inferred from electronic annotation /// 0015035 // protein disulfide oxidoreductase activity // inferred from electronic annotation /// 0015036 // disulfide oxidoreductase activity // inferred from direct assay","chr18:54275509-54305933 (-) // 72.91 // q21.31"]
["11733453_at",104.30926,87.708725,100.435936,100.37006,91.407234,91.93923,0.11882734,-0.131248,0.06423521,0.06328869,-0.07166004,-0.06328821,0.8634598,0.6628349,1.0289394,0.04115797,1.0289394,"up","IRX5",10265,"0002027 // regulation of heart rate // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0042551 // neuron maturation // inferred from electronic annotation /// 0048468 // cell development // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0060040 // retinal bipolar neuron differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005499 // vitamin D binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr16:54965110-54968397 (+) // 93.75 // q12.2"]
["11755273_a_at",30.938986,34.36668,38.44981,35.25454,36.943035,39.903286,-0.22212982,-0.0705452,0.09142065,-0.03374672,0.03374672,0.14495182,0.64803135,0.33121166,-1.0832769,-0.11540202,1.0832769,"down","C16orf71",146562,"","","","chr16:4784502-4799395 (+) // 96.45 // p13.3"]
["11756013_a_at",19.846634,17.152008,18.89257,23.402931,21.378311,20.994967,-0.04057455,-0.25109148,-0.11164999,0.19722033,0.066679,0.04057455,0.22877443,0.039808,-1.1776656,-0.23592992,1.1776656,"down","BCL2L10",10017,"0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from direct assay /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // traceable author statement /// 0007283 // spermatogenesis // traceable author statement /// 0007292 // female gamete generation // traceable author statement /// 0042981 // regulation of apoptotic process // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr15:52401946-52404965 (-) // 100.0 // q21.2"]
["11733859_s_at",77.14847,76.792206,75.65785,71.99511,97.658646,81.407524,0.0033388138,-0.0033388138,-0.024808407,-0.09640026,0.34344912,0.080863,0.7098466,0.41047546,-1.0849085,-0.11757335,1.0849085,"down","CLASP2",23122,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007020 // microtubule nucleation // inferred from mutant phenotype /// 0007026 // negative regulation of microtubule depolymerization // non-traceable author statement /// 0007026 // negative regulation of microtubule depolymerization // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007163 // establishment or maintenance of cell polarity // traceable author statement /// 0007163 // establishment or maintenance of cell polarity // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0016477 // cell migration // inferred from electronic annotation /// 0031023 // microtubule organizing center organization // inferred from mutant phenotype /// 0031110 // regulation of microtubule polymerization or depolymerization // inferred from mutant phenotype /// 0032886 // regulation of microtubule-based process // inferred from mutant phenotype /// 0034453 // microtubule anchoring // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005828 // kinetochore microtubule // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation /// 0005881 // cytoplasmic microtubule // inferred from direct assay /// 0005881 // cytoplasmic microtubule // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005938 // cell cortex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from direct assay /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from electronic annotation /// 0008107 // galactoside 2-alpha-L-fucosyltransferase activity // non-traceable author statement /// 0051010 // microtubule plus-end binding // inferred from direct assay","chr3:33537680-33760236 (-) // 97.85 // p22.3"]
["11725412_s_at",434.5844,443.80768,475.75577,486.73135,482.30667,505.3537,-0.14044952,-0.11015129,-0.009864807,0.023039818,0.009864807,0.077207565,0.2574915,0.050081592,-1.0893941,-0.12352595,1.0893941,"down","TRIM14",9830,"","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:100846468-100881695 (-) // 79.6 // q22.33"]
["11738413_a_at",41.809155,42.993633,51.77016,39.888676,46.075138,35.990295,-0.020152092,0.020152092,0.28814983,-0.087991714,0.12001753,-0.23636293,0.62912965,0.31073743,1.1205152,0.16416225,1.1205152,"up","PUS10",150962,"0001522 // pseudouridine synthesis // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from electronic annotation /// 0009451 // RNA modification // inferred from electronic annotation","","0003723 // RNA binding // inferred from electronic annotation /// 0009982 // pseudouridine synthase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation","chr2:61167548-61245365 (-) // 94.35 // p16.1"]
["11746945_a_at",285.6438,319.29636,299.7689,331.17862,335.9992,367.09607,-0.18703556,-0.026356697,-0.11740208,0.026356697,0.04720497,0.17490482,0.23652998,0.042488724,-1.1432072,-0.19308689,1.1432072,"down","UBL4A",8266,"0006464 // cellular protein modification process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0071816 // tail-anchored membrane protein insertion into ER membrane // inferred from mutant phenotype","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0071818 // BAT3 complex // inferred from direct assay","0019787 // small conjugating protein ligase activity // traceable author statement","chrX:153713536-153714923 (-) // 99.53 // q28"]
["11734004_x_at",338.57748,340.21326,339.71478,476.73608,502.83252,497.96973,-0.25032902,-0.24337578,-0.24549103,0.24337578,0.3202629,0.30624294,0.012595721,2.2694992e-5,-1.4503078,-0.53635913,1.4503078,"down","TMEM192 /// ZNF320","162967 /// 201931","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:165997230-166034071 (-) // 71.47 // q32.3"]
["11719521_at",51.564297,49.572,45.41249,29.424253,31.37373,40.887558,0.25899696,0.20214987,0.075713634,-0.55036974,-0.4578185,-0.075713634,0.1824602,0.02524653,1.4542286,0.5402541,1.4542286,"up","SEMA5A",9037,"0001569 // patterning of blood vessels // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0008046 // axon guidance receptor activity // inferred from electronic annotation","chr5:9035141-9546233 (-) // 95.93 // p15.31"]
["11747003_x_at",23.673136,25.606382,19.796452,35.253048,32.05013,25.735638,-0.11688471,-0.0036320686,-0.37489367,0.4576125,0.32019472,0.0036320686,0.3040027,0.07030874,-1.3431464,-0.4256166,1.3431464,"down","LRRC31",79782,"","","","chr3:169556966-169587723 (-) // 99.04 // q26.2"]
["11755972_a_at",524.10614,454.05615,453.2225,528.8689,437.5384,404.05588,0.20831394,0.0013256073,-0.0013256073,0.22136497,-0.052135468,-0.16699028,0.8499412,0.6364385,1.0487651,0.06869153,1.0487651,"up","MGEA5",10724,"0006044 // N-acetylglucosamine metabolic process // inferred from electronic annotation /// 0006516 // glycoprotein catabolic process // traceable author statement /// 0006612 // protein targeting to membrane // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010524 // positive regulation of calcium ion transport into cytosol // inferred from electronic annotation /// 0010616 // negative regulation of cardiac muscle adaptation // inferred from electronic annotation /// 0016573 // histone acetylation // inferred from electronic annotation /// 0031343 // positive regulation of cell killing // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0043243 // positive regulation of protein complex disassembly // inferred from electronic annotation /// 0045862 // positive regulation of proteolysis // inferred from electronic annotation /// 0046060 // dATP metabolic process // inferred from electronic annotation /// 0046326 // positive regulation of glucose import // inferred from electronic annotation /// 0048545 // response to steroid hormone stimulus // inferred from electronic annotation /// 0051054 // positive regulation of DNA metabolic process // inferred from electronic annotation /// 0051901 // positive regulation of mitochondrial depolarization // inferred from electronic annotation /// 0051928 // positive regulation of calcium ion transport // inferred from electronic annotation /// 0060051 // negative regulation of protein glycosylation // inferred from electronic annotation /// 0060124 // positive regulation of growth hormone secretion // inferred from electronic annotation /// 0070265 // necrotic cell death // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0004415 // hyalurononglucosaminidase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation","chr10:103558999-103578191 (-) // 95.59 // q24.32"]
["11722015_at",3013.992,2798.4788,2773.2698,567.5987,539.2227,535.6555,1.26441,1.1573772,1.1443224,-1.1443224,-1.2183123,-1.2278881,0.0052464344,8.49711e-7,5.2254095,2.385544,5.2254095,"up","OLR1",4973,"0006508 // proteolysis // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007159 // leukocyte cell-cell adhesion // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008015 // blood circulation // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0042157 // lipoprotein metabolic process // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005041 // low-density lipoprotein receptor activity // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr12:10310899-10324802 (-) // 78.55 // p13.2"]
["11727071_at",16.060215,20.460314,18.020319,14.910606,21.733976,21.644955,-0.25773525,0.09160185,-0.09160185,-0.36488748,0.17872572,0.17280436,0.88758683,0.71341133,-1.0580877,-0.08145922,1.0580877,"down","ENPP6",133121,"0008152 // metabolic process // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0019695 // choline metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0008889 // glycerophosphodiester phosphodiesterase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr4:185009859-185139114 (-) // 91.17 // q35.1"]
["11728657_at",11.007157,15.148199,14.0307865,20.01908,13.912033,17.307713,-0.40542912,0.0552752,-0.0552752,0.4575045,-0.06753802,0.24754405,0.46890992,0.16724846,-1.2724831,-0.3476465,1.2724831,"down","IGFBP5",3488,"0001558 // regulation of cell growth // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0014912 // negative regulation of smooth muscle cell migration // inferred from direct assay /// 0017148 // negative regulation of translation // inferred from direct assay /// 0030336 // negative regulation of cell migration // inferred from direct assay /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0043569 // negative regulation of insulin-like growth factor receptor signaling pathway // inferred from direct assay /// 0043569 // negative regulation of insulin-like growth factor receptor signaling pathway // inferred from electronic annotation /// 0048630 // skeletal muscle tissue growth // inferred from electronic annotation /// 0048662 // negative regulation of smooth muscle cell proliferation // inferred from direct assay /// 0051146 // striated muscle cell differentiation // inferred from electronic annotation /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0060056 // mammary gland involution // inferred from electronic annotation /// 0071320 // cellular response to cAMP // inferred from direct assay /// 0071407 // cellular response to organic cyclic compound // inferred from direct assay","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0016942 // insulin-like growth factor binding protein complex // inferred by curator","0001968 // fibronectin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005520 // insulin-like growth factor binding // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from electronic annotation /// 0031994 // insulin-like growth factor I binding // inferred from physical interaction","chr2:217536827-217560272 (-) // 94.34 // q35"]
["11735458_a_at",12.228667,14.1871395,16.446848,10.717082,14.825305,16.497583,-0.2460556,-0.031738997,0.18148828,-0.43641067,0.031738997,0.18593192,0.95123947,0.86438656,1.028692,0.0408111,1.028692,"up","FBXO39",162517,"","","","chr17:6679541-6690965 (+) // 95.07 // p13.1"]
["11726666_a_at",82.407906,80.08947,80.028244,77.58217,84.030815,79.88955,0.041721344,0.0005517006,-0.0005517006,-0.045336246,0.069858074,-0.0030536652,0.9503491,0.86190796,1.0046904,0.0067510093,1.0046904,"up","MFSD8",256471,"0006810 // transport // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","","chr4:128838960-128887139 (-) // 92.95 // q28.2"]
["11726448_at",19.595558,27.4541,34.177727,27.521057,29.285414,28.643854,-0.51885414,-0.032359123,0.28367567,-0.028844833,0.060801506,0.028844833,0.86451584,0.66547537,-1.0788141,-0.10944635,1.0788141,"down","ZNF614",80110,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:52516762-52531926 (-) // 69.5 // q13.41"]
["11731855_at",7.1053257,7.154805,7.06983,7.560066,7.7925987,8.635806,-0.04975462,-0.039742947,-0.056979895,0.039743185,0.083449125,0.23167562,0.24490152,0.045618765,-1.1228111,-0.1671152,1.1228111,"down","C10orf107",219621,"","","","chr10:63422541-63526524 (+) // 94.67 // q21.2"]
["11734547_a_at",17.348955,21.264732,18.290339,24.398214,22.103102,23.188314,-0.32150698,-0.027893066,-0.24527407,0.1704197,0.027893066,0.097042084,0.22223909,0.037843645,-1.2283114,-0.29667637,1.2283114,"down","TGM4",7047,"0018149 // peptide cross-linking // non-traceable author statement /// 0018149 // peptide cross-linking // inferred from electronic annotation /// 0018184 // protein polyamination // non-traceable author statement","","0003810 // protein-glutamine gamma-glutamyltransferase activity // non-traceable author statement /// 0003810 // protein-glutamine gamma-glutamyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:44916097-44956086 (+) // 96.08 // p21.31"]
["11740693_a_at",79.79035,80.07216,81.87616,75.32677,82.38952,92.05618,-0.021157742,-0.01607132,0.016070843,-0.10420942,0.02508831,0.18514252,0.8529518,0.6422134,-1.0298207,-0.042393148,1.0298207,"down","FAM83C",128876,"","","","chr20:33873286-33880225 (-) // 87.15 // q11.22"]
["11722354_at",1438.4222,1385.3971,1497.7124,1486.6255,1563.1029,1424.7885,-0.023777008,-0.07796478,0.034496307,0.023777008,0.09614849,-0.037516594,0.68579453,0.37886348,-1.0351822,-0.049884766,1.0351822,"down","SEC23A",10484,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0016192 // vesicle-mediated transport // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0048208 // COPII vesicle coating // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030127 // COPII vesicle coat // inferred from electronic annotation /// 0030868 // smooth endoplasmic reticulum membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation","chr14:39501122-39572732 (-) // 98.24 // q21.1"]
["11717998_a_at",692.79333,650.27875,636.11414,685.8871,654.2913,611.097,0.08692932,-0.0044374466,-0.03621006,0.07247543,0.0044374466,-0.09409428,0.9031119,0.74554497,1.0147711,0.021154344,1.0147711,"up","MPLKIP",136647,"0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr7:40172344-40174486 (-) // 86.28 // p14.1"]
["11746623_a_at",6.867941,7.343736,7.8273034,6.647999,7.297389,7.3763394,-0.092069626,0.004566908,0.09656811,-0.13902712,-0.004566908,0.010957718,0.8018717,0.54943514,1.0332819,0.047233935,1.0332819,"up","NR3C2",4306,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006883 // cellular sodium ion homeostasis // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007588 // excretion // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0031959 // mineralocorticoid receptor signaling pathway // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // traceable author statement /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005496 // steroid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0017082 // mineralocorticoid receptor activity // inferred from electronic annotation /// 0042562 // hormone binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr4:149001343-149365850 (-) // 98.55 // q31.23"]
["11716197_a_at",110.774315,131.85387,112.53779,96.08128,98.848564,106.42298,0.028906822,0.28022385,0.05169344,-0.17638874,-0.13542461,-0.028906822,0.28864673,0.06291169,1.1759675,0.23384812,1.1759675,"up","ADIPOR2",79602,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0009755 // hormone-mediated signaling pathway // inferred from sequence or structural similarity /// 0019395 // fatty acid oxidation // inferred from sequence or structural similarity","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0042562 // hormone binding // inferred from sequence or structural similarity /// 0042802 // identical protein binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr12:1800188-1897845 (+) // 96.29 // p13.33"]
["11742047_s_at",10.190841,9.027295,8.777222,10.282131,9.897128,10.097677,0.027720451,-0.147187,-0.18771648,0.04058671,-0.014470816,0.014470816,0.4637163,0.16337797,-1.0836684,-0.11592329,1.0836684,"down","ERMN",57471,"0001763 // morphogenesis of a branching structure // inferred from electronic annotation /// 0007015 // actin filament organization // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0031344 // regulation of cell projection organization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0033269 // internode region of axon // inferred from electronic annotation /// 0033270 // paranode region of axon // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043209 // myelin sheath // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from electronic annotation","chr2:158175125-158184218 (-) // 92.68 // q24.1"]
["11751503_a_at",32.514046,46.75997,48.125763,29.430109,44.301777,47.825607,-0.4852562,0.038954735,0.08049011,-0.6290264,-0.038954735,0.07146406,0.92489463,0.7996795,1.0547506,0.07690185,1.0547506,"up","FGF17",8822,"0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement","0005105 // type 1 fibroblast growth factor receptor binding // inferred from direct assay /// 0005111 // type 2 fibroblast growth factor receptor binding // inferred from direct assay /// 0008083 // growth factor activity // inferred from electronic annotation /// 0008083 // growth factor activity // traceable author statement","chr8:21900425-21906317 (+) // 99.08 // p21.3"]
["11755159_a_at",24.212059,26.964828,28.562956,36.73994,40.666084,34.859554,-0.38212395,-0.22677088,-0.14370441,0.21949959,0.36597633,0.14370441,0.09607793,0.006665818,-1.4082725,-0.49392653,1.4082725,"down","COG3",83548,"0006486 // protein glycosylation // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from direct assay /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // inferred from mutant phenotype /// 0006891 // intra-Golgi vesicle-mediated transport // inferred from direct assay /// 0015031 // protein transport // inferred from direct assay /// 0015031 // protein transport // inferred from electronic annotation /// 0033365 // protein localization to organelle // inferred from mutant phenotype /// 0050821 // protein stabilization // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005801 // cis-Golgi network // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0017119 // Golgi transport complex // inferred from direct assay /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008565 // protein transporter activity // inferred from direct assay","chr13:46039070-46110759 (+) // 96.57 // q14.13"]
["11721924_s_at",77.88869,53.224964,51.558094,41.926018,45.05364,37.0094,0.6924925,0.1431818,0.09727764,-0.20107555,-0.09727764,-0.3810296,0.28474504,0.061403662,1.4513998,0.53744495,1.4513998,"up","PRKCB",5579,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010829 // negative regulation of glucose transport // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0035408 // histone H3-T6 phosphorylation // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042113 // B cell activation // inferred from sequence or structural similarity /// 0042953 // lipoprotein transport // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from sequence or structural similarity /// 0045766 // positive regulation of angiogenesis // inferred from sequence or structural similarity /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0050853 // B cell receptor signaling pathway // inferred from sequence or structural similarity /// 0050861 // positive regulation of B cell receptor signaling pathway // inferred from sequence or structural similarity /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004697 // protein kinase C activity // inferred from electronic annotation /// 0004697 // protein kinase C activity // traceable author statement /// 0005080 // protein kinase C binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from mutant phenotype /// 0035403 // histone kinase activity (H3-T6 specific) // inferred from direct assay /// 0042393 // histone binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050681 // androgen receptor binding // inferred from direct assay","chr16:23846527-24231932 (+) // 90.25 // p12.2"]
["11759355_x_at",36.3598,58.311707,46.600945,37.68403,52.883167,57.106354,-0.44923973,0.23220205,-0.09122467,-0.3976307,0.09122467,0.2020669,0.93107504,0.81334656,-1.0482439,-0.0679744,1.0482439,"down","GPR32",2854,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004982 // N-formyl peptide receptor activity // inferred from electronic annotation","chr19:51273720-51275252 (+) // 84.38 // q13.33"]
["11720638_a_at",683.1757,667.93414,607.3698,717.7279,652.056,607.4276,0.049905777,0.017354965,-0.11977577,0.12108612,-0.017354965,-0.11963844,0.962755,0.8952306,-1.008494,-0.012202528,1.008494,"down","ACBD6",84320,"","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000062 // fatty-acyl-CoA binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation","chr1:180257364-180472102 (-) // 92.92 // q25.2"]
["11743485_s_at",143.4825,128.31947,140.15079,173.29092,162.22295,155.6112,-0.058535576,-0.2196703,-0.09243059,0.21378517,0.11856747,0.0585351,0.15822738,0.019008428,-1.1923778,-0.25384143,1.1923778,"down","NAA25",80018,"","0005737 // cytoplasm // inferred from electronic annotation","","chr12:112464492-112546826 (-) // 97.81 // q24.13"]
["11762983_a_at",38.30157,27.675114,27.67677,33.452168,31.036358,28.783447,0.3578043,-0.111010075,-0.11092377,0.16250038,0.054359913,-0.054359913,0.9865086,0.96047294,-1.0061718,-0.008876693,1.0061718,"down","MED25",81857,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0035563 // positive regulation of chromatin binding // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048147 // negative regulation of fibroblast proliferation // inferred from mutant phenotype /// 0071158 // positive regulation of cell cycle arrest // inferred from mutant phenotype /// 2001178 // positive regulation of mediator complex assembly // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0042974 // retinoic acid receptor binding // inferred from physical interaction /// 0042974 // retinoic acid receptor binding // inferred from electronic annotation /// 0046965 // retinoid X receptor binding // inferred from physical interaction /// 0046965 // retinoid X receptor binding // inferred from electronic annotation","chr19:50321598-50340219 (+) // 100.0 // q13.33"]
["11731791_a_at",31.823195,31.65333,33.201572,39.6411,33.169556,27.78945,-0.029890537,-0.03761196,0.031282425,0.28702784,0.029890537,-0.22543192,0.9215482,0.7900184,-1.0299461,-0.04256882,1.0299461,"down","SLC27A6",28965,"0000038 // very long-chain fatty acid metabolic process // traceable author statement /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0015909 // long-chain fatty acid transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004467 // long-chain fatty acid-CoA ligase activity // traceable author statement /// 0016874 // ligase activity // inferred from electronic annotation /// 0031957 // very long-chain fatty acid-CoA ligase activity // inferred from electronic annotation","chr5:128300819-128369328 (+) // 96.5 // q23.3"]
["11742685_a_at",327.22308,294.62262,299.7808,284.3627,258.5705,244.8826,0.1769743,0.025568008,0.05060768,-0.025568008,-0.16274261,-0.24121046,0.24129154,0.044213578,1.1708506,0.22755703,1.1708506,"up","LAMP2",3920,"0002576 // platelet degranulation // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement","0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0005770 // late endosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // inferred from electronic annotation /// 0031088 // platelet dense granule membrane // inferred from direct assay /// 0031088 // platelet dense granule membrane // traceable author statement /// 0031902 // late endosome membrane // inferred from direct assay","","chrX:119560002-119603201 (-) // 92.06 // q24"]
["11715314_at",40.298748,31.142412,38.424503,33.191216,32.446606,32.178883,0.2963004,-0.075553894,0.22759199,0.016366959,-0.016366959,-0.028320312,0.55800354,0.239288,1.1164249,0.15888622,1.1164249,"up","","","","","","chr7:66136417-66148154 (+) // 96.52 // q11.21"]
["11747404_a_at",51.837982,36.64262,43.24486,51.218487,41.042126,47.553852,0.19296408,-0.30752277,-0.06851673,0.17561913,-0.14393997,0.06851673,0.83683544,0.6129339,-1.0676389,-0.09442374,1.0676389,"down","ZNF586",54807,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:58281019-58291912 (+) // 99.9 // q13.43"]
["11717364_a_at",795.18207,751.5793,755.6044,836.0443,818.11664,808.85785,-0.012300491,-0.093660355,-0.085954666,0.059993744,0.028720856,0.012300491,0.19709326,0.029543042,-1.0700243,-0.097643495,1.0700243,"down","BCL2L12",83596,"0006915 // apoptotic process // inferred from electronic annotation","","","chr19:50168398-50177173 (+) // 97.73 // q13.33"]
["11727026_a_at",1024.3528,982.79016,1047.3064,1128.2966,1048.556,924.29956,-0.015985489,-0.07574272,0.015985489,0.12344837,0.017705917,-0.16426563,0.9470465,0.85206383,-1.0122347,-0.017543819,1.0122347,"down","NDUFB5",4711,"0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0006120 // mitochondrial electron transport, NADH to ubiquinone // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation","0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement /// 0008137 // NADH dehydrogenase (ubiquinone) activity // traceable author statement","chr3:179322581-179342288 (+) // 90.18 // q26.33"]
["11740871_a_at",6.4539876,5.419155,5.6823,5.7645683,5.6371455,5.6750326,0.18463898,-0.0674839,0.00092315674,0.021660805,-0.010586977,-0.00092315674,0.8620609,0.6601397,1.0252501,0.03597585,1.0252501,"up","MS4A7",58475,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr11:60145957-60163424 (+) // 76.67 // q12.2"]
["11742007_x_at",161.46294,177.38953,188.08228,174.80257,172.299,192.88965,-0.12512064,0.010597229,0.095039845,-0.010597229,-0.031409264,0.13145208,0.87217957,0.6809516,-1.0254874,-0.036309797,1.0254874,"down","KRTAP12-2",353323,"","0005882 // intermediate filament // inferred from electronic annotation /// 0045095 // keratin filament // inferred from electronic annotation","","chr21:46086106-46086844 (-) // 96.98 // q22.3"]
["11757452_x_at",328.9179,297.55182,284.82587,259.8898,262.8492,226.3043,0.2655697,0.120983124,0.057922363,-0.07425785,-0.057922363,-0.27389383,0.22196764,0.037747305,1.217158,0.2835164,1.217158,"up","INO80B",83444,"0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0031011 // Ino80 complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:74684458-74685071 (+) // 84.83 // p13.1"]
["11753433_a_at",128.75671,113.00478,119.71764,97.708435,102.22288,97.88955,0.26059628,0.072333336,0.15558529,-0.137496,-0.072333336,-0.13482428,0.11032696,0.008977656,1.2122799,0.27772287,1.2122799,"up","C1orf216",127703,"","","","chr1:36181068-36184423 (-) // 100.0 // p34.3"]
["11722526_at",42.5708,40.758636,42.497414,56.34838,50.89361,48.891888,-0.09986544,-0.16262388,-0.10235453,0.30464506,0.1577549,0.09986544,0.10829846,0.008613199,-1.2388799,-0.30903634,1.2388799,"down","PTPN21",11099,"0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr14:88932121-89021123 (-) // 97.22 // q31.3"]
["11740913_a_at",69.82826,69.67513,72.888306,69.55622,76.72285,75.80839,-0.030938148,-0.0341053,0.030938148,-0.036569595,0.104907036,0.08760834,0.58783865,0.26841196,-1.0448895,-0.06335031,1.0448895,"down","SKOR1",390598,"0000122 // negative regulation of transcription from RNA polymerase II promoter // not recorded /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // not recorded /// 0030514 // negative regulation of BMP signaling pathway // inferred from direct assay","0005634 // nucleus // not recorded /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded /// 0030425 // dendrite // inferred from direct assay /// 0043025 // neuronal cell body // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0046332 // SMAD binding // inferred from physical interaction /// 0046332 // SMAD binding // inferred from electronic annotation","chr15:68118273-68126174 (+) // 86.78 // q23"]
["11750066_x_at",144.03249,137.91002,130.3048,146.36159,141.55621,140.54707,0.030180454,-0.03248644,-0.114323616,0.05332327,0.0051612854,-0.0051608086,0.6018778,0.28154755,-1.0400487,-0.056651108,1.0400487,"down","FLJ42709",441094,"","","","chr5:92746994-92916713 (-) // 89.21 // q15"]
["11752699_a_at",112.80856,87.65158,97.55622,116.33152,112.722916,107.28128,0.036787033,-0.3272376,-0.17278433,0.08115244,0.03569126,-0.03569126,0.48171464,0.17691264,-1.1340328,-0.18146242,1.1340328,"down","ARHGEF4",50649,"0006915 // apoptotic process // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0030032 // lamellipodium assembly // inferred from mutant phenotype /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // non-traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042060 // wound healing // inferred from direct assay /// 0045787 // positive regulation of cell cycle // inferred from direct assay /// 0046847 // filopodium assembly // inferred from mutant phenotype /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050673 // epithelial cell proliferation // inferred from direct assay /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // non-traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from mutant phenotype /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // non-traceable author statement /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0030676 // Rac guanyl-nucleotide exchange factor activity // inferred from mutant phenotype","chr2:131674537-131804281 (+) // 99.94 // q21.1"]
["11734184_a_at",9.4929905,12.27745,11.382292,10.046348,11.518916,13.996308,-0.2704637,0.10061264,-0.008606911,-0.18872666,0.008606911,0.28964853,0.83900136,0.6166952,-1.0688027,-0.095995575,1.0688027,"down","PRDM5",11107,"0000278 // mitotic cell cycle // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016575 // histone deacetylation // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0051567 // histone H3-K9 methylation // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0000976 // transcription regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070491 // repressing transcription factor binding // inferred from direct assay","chr4:121614918-121844013 (-) // 97.37 // q27"]
["11717932_at",326.38556,309.55615,308.66855,463.22272,411.70218,394.47937,-0.13668633,-0.21306229,-0.21720505,0.36844254,0.19833755,0.13668633,0.080269374,0.004633019,-1.3411525,-0.42347333,1.3411525,"down","TBK1",29110,"0002218 // activation of innate immune response // inferred from electronic annotation /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0009615 // response to virus // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0032606 // type I interferon production // traceable author statement /// 0032727 // positive regulation of interferon-alpha production // inferred from direct assay /// 0032728 // positive regulation of interferon-beta production // inferred from direct assay /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0045359 // positive regulation of interferon-beta biosynthetic process // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004672 // protein kinase activity // non-traceable author statement /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0051219 // phosphoprotein binding // inferred from physical interaction","chr12:64845659-64895894 (+) // 98.91 // q14.2"]
["11763173_s_at",228.38489,226.22383,211.57526,252.71085,230.29993,237.90973,-0.006023407,-0.019739628,-0.11631966,0.13999748,0.006023407,0.05292368,0.35570246,0.095847756,-1.0819814,-0.11367572,1.0819814,"down","PGM3",5238,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006041 // glucosamine metabolic process // non-traceable author statement /// 0006048 // UDP-N-acetylglucosamine biosynthetic process // not recorded /// 0006048 // UDP-N-acetylglucosamine biosynthetic process // inferred from electronic annotation /// 0006048 // UDP-N-acetylglucosamine biosynthetic process // traceable author statement /// 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0019255 // glucose 1-phosphate metabolic process // inferred from electronic annotation /// 0030097 // hemopoiesis // not recorded /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005829 // cytosol // not recorded /// 0005829 // cytosol // traceable author statement","0000287 // magnesium ion binding // inferred from electronic annotation /// 0004610 // phosphoacetylglucosamine mutase activity // inferred from direct assay /// 0004610 // phosphoacetylglucosamine mutase activity // inferred from electronic annotation /// 0004614 // phosphoglucomutase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0016868 // intramolecular transferase activity, phosphotransferases // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:83875908-83903633 (-) // 75.49 // q14.1"]
["11733519_a_at",18.08149,16.064844,17.920647,16.586643,16.863832,20.449017,0.056735992,-0.11387062,0.043845177,-0.0677557,-0.043845177,0.23425388,0.8840744,0.70493275,-1.0319078,-0.04531407,1.0319078,"down","KCNK10",54207,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0071805 // potassium ion transmembrane transport // traceable author statement /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005267 // potassium channel activity // inferred from electronic annotation /// 0005267 // potassium channel activity // traceable author statement","chr14:88646453-88789595 (-) // 92.82 // q31.3"]
["11725803_a_at",132.88954,123.55621,121.95558,110.872665,98.72286,96.94025,0.19259739,0.08753729,0.068725586,-0.06872606,-0.2361741,-0.26246262,0.13205785,0.013169692,1.2357678,0.30540773,1.2357678,"up","C21orf91",54149,"","","","chr21:19161290-19191703 (-) // 97.48 // q21.1"]
["11732987_x_at",9.940814,12.184415,10.659512,10.301851,10.042626,10.839906,-0.07608652,0.21751451,0.024619102,-0.024618864,-0.06138563,0.048829794,0.77345306,0.5025135,1.048074,0.06774059,1.048074,"up","IFNA6",3443,"0006952 // defense response // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0009615 // response to virus // non-traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement /// 0060338 // regulation of type I interferon-mediated signaling pathway // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0005126 // cytokine receptor binding // non-traceable author statement /// 0005126 // cytokine receptor binding // inferred from electronic annotation","chr9:21350316-21350886 (-) // 100.0 // p21.3"]
["11733294_at",21.40078,29.406248,30.802608,30.729496,31.538143,34.347797,-0.52367496,-0.06521559,0.0017142296,-0.0017142296,0.03575945,0.15887928,0.518102,0.20530033,-1.1975065,-0.26003355,1.1975065,"down","PHF20L1",51105,"","","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:133787576-133825437 (+) // 96.07 // q24.22"]
["11744612_a_at",788.67664,823.51105,810.1148,701.5124,749.6799,766.1479,0.020905495,0.08325958,0.05959797,-0.14805984,-0.052253723,-0.020905495,0.2252881,0.03875895,1.0930257,0.1283273,1.0930257,"up","NUDCD1",84955,"","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","","chr8:110254909-110346347 (-) // 97.62 // q23.1"]
["11738934_at",18.376736,17.525398,18.290894,23.694803,17.365496,20.14583,0.0033774376,-0.06505585,-0.0033774376,0.3700676,-0.078279495,0.13597822,0.5987167,0.27902538,-1.1206021,-0.16427414,1.1206021,"down","GSX1",219409,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0021527 // spinal cord association neuron differentiation // inferred from electronic annotation /// 0021854 // hypothalamus development // inferred from electronic annotation /// 0021984 // adenohypophysis development // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048663 // neuron fate commitment // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr13:28366779-28368089 (+) // 92.68 // q12.2"]
["11727118_a_at",16.584204,21.320845,21.125418,18.105913,19.604841,22.151363,-0.29528522,0.06716967,0.053884983,-0.16863394,-0.053884983,0.122300625,0.95531183,0.87379265,-1.0172476,-0.024670817,1.0172476,"down","CFP",5199,"0006955 // immune response // traceable author statement /// 0006956 // complement activation // traceable author statement /// 0006957 // complement activation, alternative pathway // traceable author statement /// 0006957 // complement activation, alternative pathway // inferred from electronic annotation /// 0030449 // regulation of complement activation // traceable author statement /// 0042742 // defense response to bacterium // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0031012 // extracellular matrix // inferred from direct assay","","chrX:47483611-47489704 (-) // 89.24 // p11.23"]
["11723196_at",460.1683,423.62183,451.0914,481.4307,449.63147,447.20142,0.031080246,-0.08830452,0.0023384094,0.09624672,-0.0023384094,-0.0101566315,0.70587766,0.40478113,-1.0325506,-0.046212446,1.0325506,"down","C2orf15 /// MRPL30","150590 /// 51263","0006412 // translation // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from electronic annotation","chr2:99797541-99814351 (+) // 66.41 // q11.2"]
["11739399_s_at",357.73584,350.28467,342.23178,348.50256,365.4383,375.17014,0.015183449,-0.015183449,-0.048737526,-0.022542,0.045916557,0.083833694,0.54081637,0.22424254,-1.0366881,-0.051981892,1.0366881,"down","C20orf194 /// UBE2F","140739 /// 25943","0045116 // protein neddylation // inferred from direct assay /// 0045116 // protein neddylation // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation /// 0019788 // NEDD8 ligase activity // inferred from direct assay","chr2:238875586-238950957 (+) // 98.4 // q37.3"]
["11747089_a_at",65.60406,68.43367,62.65702,54.842216,66.91391,62.389652,0.033154488,0.09407568,-0.033154488,-0.2253437,0.06167555,-0.039323807,0.65680134,0.34114042,1.0710475,0.09902252,1.0710475,"up","PTPRS",5802,"0006470 // protein dephosphorylation // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0021510 // spinal cord development // inferred from electronic annotation /// 0021549 // cerebellum development // inferred from electronic annotation /// 0021766 // hippocampus development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0022038 // corpus callosum development // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005001 // transmembrane receptor protein tyrosine phosphatase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr19:5273074-5286399 (-) // 82.68 // p13.3"]
["11719967_at",279.18494,272.97583,239.73026,238.84785,235.48834,258.9545,0.16416597,0.13171816,-0.05564356,-0.060963154,-0.08139944,0.05564356,0.5676102,0.24827471,1.0784703,0.10898651,1.0784703,"up","HTT",3064,"0000050 // urea cycle // inferred from electronic annotation /// 0000052 // citrulline metabolic process // inferred from electronic annotation /// 0000132 // establishment of mitotic spindle orientation // inferred from mutant phenotype /// 0006606 // protein import into nucleus // inferred from electronic annotation /// 0006839 // mitochondrial transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from electronic annotation /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // inferred from mutant phenotype /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0007005 // mitochondrion organization // inferred from electronic annotation /// 0007029 // endoplasmic reticulum organization // inferred from electronic annotation /// 0007030 // Golgi organization // inferred from mutant phenotype /// 0007212 // dopamine receptor signaling pathway // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007369 // gastrulation // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007569 // cell aging // inferred from electronic annotation /// 0007610 // behavior // inferred from electronic annotation /// 0007611 // learning or memory // inferred from electronic annotation /// 0007612 // learning // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0008088 // axon cargo transport // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008306 // associative learning // inferred from electronic annotation /// 0008340 // determination of adult lifespan // inferred from electronic annotation /// 0008542 // visual learning // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0016197 // endosomal transport // inferred from electronic annotation /// 0019244 // lactate biosynthetic process from pyruvate // inferred from electronic annotation /// 0019805 // quinolinate biosynthetic process // inferred from electronic annotation /// 0021756 // striatum development // inferred from electronic annotation /// 0021988 // olfactory lobe development // inferred from electronic annotation /// 0021990 // neural plate formation // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from electronic annotation /// 0030072 // peptide hormone secretion // inferred from electronic annotation /// 0030073 // insulin secretion // inferred from electronic annotation /// 0034047 // regulation of protein phosphatase type 2A activity // inferred from mutant phenotype /// 0035176 // social behavior // inferred from electronic annotation /// 0042445 // hormone metabolic process // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0046902 // regulation of mitochondrial membrane permeability // inferred from electronic annotation /// 0047496 // vesicle transport along microtubule // inferred from mutant phenotype /// 0047496 // vesicle transport along microtubule // inferred from electronic annotation /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0048341 // paraxial mesoderm formation // inferred from electronic annotation /// 0048513 // organ development // not recorded /// 0048666 // neuron development // inferred from electronic annotation /// 0051402 // neuron apoptotic process // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from electronic annotation /// 0051881 // regulation of mitochondrial membrane potential // inferred from electronic annotation /// 0051938 // L-glutamate import // inferred from electronic annotation /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0005776 // autophagic vacuole // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0016234 // inclusion body // inferred from electronic annotation /// 0030424 // axon // inferred from direct assay /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from direct assay /// 0030659 // cytoplasmic vesicle membrane // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay","0002039 // p53 binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // not recorded /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0034452 // dynactin binding // inferred from physical interaction /// 0045505 // dynein intermediate chain binding // inferred from direct assay /// 0048487 // beta-tubulin binding // inferred from direct assay /// 0050809 // diazepam binding // inferred from electronic annotation","chr4:3076236-3245684 (+) // 97.61 // p16.3"]
["11742227_at",35.751163,33.408535,39.67222,29.50637,29.622252,37.092403,0.048886776,-0.048886776,0.19902563,-0.22807693,-0.22242212,0.10202026,0.55377436,0.23532811,1.1348499,0.1825015,1.1348499,"up","CLDN22",53842,"0016338 // calcium-independent cell-cell adhesion // inferred from sequence or structural similarity /// 0034329 // cell junction assembly // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement /// 0070830 // tight junction assembly // traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from sequence or structural similarity","chr4:184239219-184241927 (-) // 98.86 // q35.1"]
["11744134_at",639.4997,669.2158,659.7833,620.65594,644.8057,620.2331,-0.0059604645,0.05956745,0.03908825,-0.049110413,0.0059604645,-0.05009365,0.3284152,0.081713185,1.0438972,0.06197958,1.0438972,"up","ZSWIM6",57688,"","","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:60628099-60841999 (+) // 91.81 // q12.1"]
["11716818_a_at",10.221865,10.658703,10.239392,10.661042,12.0630045,11.4048395,-0.060531855,-0.00015854836,-0.05806017,0.00015830994,0.17839909,0.09745574,0.31566247,0.07557494,-1.0954988,-0.13158791,1.0954988,"down","VSIG4",11326,"0006957 // complement activation, alternative pathway // inferred from electronic annotation /// 0032703 // negative regulation of interleukin-2 production // inferred from electronic annotation /// 0042130 // negative regulation of T cell proliferation // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chrX:65241579-65259967 (-) // 98.46 // q12"]
["11741873_a_at",698.53046,665.36896,676.9522,739.53015,712.0232,680.1881,0.019194603,-0.050973892,-0.02607441,0.101480484,0.046795845,-0.019194603,0.5097685,0.19859247,-1.0441376,-0.062311843,1.0441376,"down","CSNK1E",1454,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0034613 // cellular protein localization // inferred from electronic annotation /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from sequence or structural similarity /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr22:38686697-38714089 (-) // 92.37 // q13.1"]
["11763684_x_at",85.03763,98.63073,113.53685,70.541245,106.903885,107.623,-0.27203846,-0.058102608,0.14494944,-0.5416727,0.058102608,0.067774296,0.9094268,0.759773,1.0547259,0.0768681,1.0547259,"up","IGK@ /// IGKC","3514 /// 50802","0006955 // immune response // non-traceable author statement /// 0006956 // complement activation // traceable author statement /// 0006958 // complement activation, classical pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0050776 // regulation of immune response // traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005886 // plasma membrane // traceable author statement","0003823 // antigen binding // non-traceable author statement /// 0003823 // antigen binding // inferred from electronic annotation","chr2:89246821-89246950 (-) // 99.22 // p11.2"]
["11719431_a_at",129.44786,118.68153,109.02355,116.09084,104.57907,112.94313,0.17694616,0.051669598,-0.07078552,0.019828796,-0.13083124,-0.019828796,0.63637644,0.31860694,1.0689694,0.096220516,1.0689694,"up","TMC6",11322,"","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr17:76106543-76124866 (-) // 90.7 // q25.3"]
["11736477_a_at",399.8038,396.22592,381.44537,505.02643,481.64047,435.46722,-0.06163597,-0.07460499,-0.12945175,0.27543068,0.20702839,0.06163597,0.14225398,0.015263869,-1.2057487,-0.26992923,1.2057487,"down","ELL2",22936,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006368 // transcription elongation from RNA polymerase II promoter // inferred from electronic annotation /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006414 // translational elongation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0008023 // transcription elongation factor complex // inferred from electronic annotation /// 0008023 // transcription elongation factor complex // traceable author statement","0003746 // translation elongation factor activity // inferred from electronic annotation","chr5:95220804-95297982 (-) // 94.81 // q15"]
["11723114_s_at",92.30025,91.70667,105.55624,96.82516,93.114265,83.21533,-0.006333828,-0.01564169,0.18727207,0.06271362,0.006333828,-0.15581894,0.7151681,0.41776416,1.0599694,0.08402265,1.0599694,"up","CENPC1",1060,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // inferred from mutant phenotype /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from mutant phenotype /// 0007067 // mitosis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 0051382 // kinetochore assembly // inferred from mutant phenotype","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000776 // kinetochore // inferred from electronic annotation /// 0000776 // kinetochore // traceable author statement /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0000780 // condensed nuclear chromosome, centromeric region // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005721 // centromeric heterochromatin // inferred from direct assay /// 0005829 // cytosol // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement","chr4:68337520-68411324 (-) // 90.09 // q13.2"]
["11744031_at",12.578661,12.203099,13.99311,23.77049,21.543661,16.475275,-0.2715311,-0.31526184,-0.117792845,0.64666224,0.50475407,0.11779308,0.15259284,0.017645719,-1.577819,-0.6579317,1.577819,"down","MMP7",4316,"0002779 // antibacterial peptide secretion // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030574 // collagen catabolic process // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation /// 0050829 // defense response to Gram-negative bacterium // inferred from electronic annotation /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0031012 // extracellular matrix // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:102391238-102401483 (-) // 83.18 // q22.2"]
["11738800_a_at",97.14106,86.645256,95.71792,97.389015,87.47166,79.03501,0.086278915,-0.078681946,0.064986706,0.08995676,-0.064986706,-0.21130991,0.73247534,0.44196245,1.0616497,0.08630779,1.0616497,"up","BRWD3",254065,"0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0008360 // regulation of cell shape // inferred from mutant phenotype","","","chrX:79931682-80065233 (-) // 95.44 // q21.1"]
["11726628_a_at",20.341497,21.660011,23.621729,20.860453,23.11438,24.594658,-0.13748646,-0.046878338,0.07820225,-0.10114193,0.046878338,0.13643265,0.79440063,0.53798676,-1.0444745,-0.06277724,1.0444745,"down","SEMA4A",64218,"0001525 // angiogenesis // inferred from electronic annotation /// 0002292 // T cell differentiation involved in immune response // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0010594 // regulation of endothelial cell migration // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045063 // T-helper 1 cell differentiation // inferred from electronic annotation /// 0071526 // semaphorin-plexin signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr1:156119473-156147613 (+) // 97.22 // q22"]
["11736073_a_at",445.73697,407.7247,400.30917,304.8323,269.02423,274.74704,0.35162735,0.22303009,0.19654942,-0.19654942,-0.37682915,-0.3464613,0.049534615,0.0015523754,1.4780369,0.56368226,1.4780369,"up","ALDH1B1",219,"0005975 // carbohydrate metabolic process // non-traceable author statement /// 0006068 // ethanol catabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0004029 // aldehyde dehydrogenase (NAD) activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016620 // oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor // inferred from electronic annotation","chr9:38392646-38398655 (+) // 69.23 // p13.2"]
["11750741_a_at",183.52121,196.88608,183.1169,166.06433,158.27094,154.69595,0.073693275,0.17510748,0.07051182,-0.07051134,-0.13985729,-0.17281818,0.09717499,0.006868488,1.176227,0.23416647,1.176227,"up","TAB2",23118,"0000187 // activation of MAPK activity // traceable author statement /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0007254 // JNK cascade // traceable author statement /// 0007507 // heart development // inferred from mutant phenotype /// 0008063 // Toll signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0045087 // innate immune response // traceable author statement /// 0045860 // positive regulation of protein kinase activity // inferred from direct assay /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070530 // K63-linked polyubiquitin binding // inferred from direct assay","chr6:149539776-149731075 (+) // 98.5 // q25.1"]
["11761977_at",12.750218,12.662583,10.885001,11.980279,11.949042,11.988098,0.0893898,0.07943964,-0.13879061,-0.00047063828,-0.004237175,0.00047063828,0.9597164,0.88549596,1.0079509,0.011425366,1.0079509,"up","CCDC171",203238,"","","","chr9:15552871-15660144 (+) // 74.54 // p22.3"]
["11734735_a_at",222.25925,291.41293,298.286,324.03244,382.72287,337.556,-0.48417377,-0.09335232,-0.059720993,0.059720993,0.2998829,0.118709564,0.31100115,0.07343896,-1.2940142,-0.37185347,1.2940142,"down","FAR1",84188,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0008611 // ether lipid biosynthetic process // traceable author statement /// 0010025 // wax biosynthetic process // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005777 // peroxisome // inferred from electronic annotation /// 0005778 // peroxisomal membrane // inferred from direct assay /// 0005778 // peroxisomal membrane // inferred from electronic annotation /// 0005782 // peroxisomal matrix // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016620 // oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0050062 // long-chain-fatty-acyl-CoA reductase activity // inferred from electronic annotation","chr11:13689891-13753889 (+) // 97.59 // p15.2"]
["11733221_a_at",171.6521,202.7729,207.46414,238.778,231.3783,197.25526,-0.256876,-0.016498566,0.016498566,0.21930695,0.17389011,-0.056299686,0.48304385,0.177929,-1.1470469,-0.1979244,1.1470469,"down","DLL3",10683,"0001501 // skeletal system development // inferred from mutant phenotype /// 0001501 // skeletal system development // inferred from electronic annotation /// 0001756 // somitogenesis // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007386 // compartment pattern specification // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0009888 // tissue development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045746 // negative regulation of Notch signaling pathway // inferred from electronic annotation /// 0048339 // paraxial mesoderm development // inferred from electronic annotation /// 0048712 // negative regulation of astrocyte differentiation // inferred from electronic annotation /// 0050768 // negative regulation of neurogenesis // inferred from electronic annotation /// 0050769 // positive regulation of neurogenesis // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005112 // Notch binding // non-traceable author statement /// 0005112 // Notch binding // inferred from electronic annotation","chr19:39989544-39999109 (+) // 98.51 // q13.2"]
["11751682_a_at",49.085815,64.766235,66.633995,54.29982,56.143482,66.392815,-0.29687405,0.103061676,0.14407825,-0.15123272,-0.103061676,0.13884735,0.9649277,0.9018866,1.0152987,0.021904264,1.0152987,"up","RNASEH2C",84153,"0006401 // RNA catabolic process // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0032299 // ribonuclease H2 complex // inferred from direct assay /// 0032299 // ribonuclease H2 complex // inferred from electronic annotation","","chr11:65486718-65488269 (-) // 99.9 // q13.1"]
["11726236_at",21.199057,23.346233,25.298044,24.518583,24.952242,24.80321,-0.21820116,-0.07901144,0.036824703,-0.008325577,0.01696825,0.008325577,0.6002751,0.2801815,-1.0661807,-0.09245198,1.0661807,"down","ACY3",91703,"0008152 // metabolic process // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation","0004046 // aminoacylase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation /// 0016811 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:67410025-67418419 (-) // 94.84 // q13.2"]
["11762876_x_at",16.01428,16.766998,16.951815,13.045129,16.022331,19.626911,-0.033495426,0.032770157,0.048585415,-0.32934332,-0.032770157,0.25997877,0.9194042,0.78570485,1.0352637,0.049998235,1.0352637,"up","CAPRIN2",65981,"0017148 // negative regulation of translation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0032092 // positive regulation of protein binding // inferred from direct assay /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from direct assay /// 0040008 // regulation of growth // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0050775 // positive regulation of dendrite morphogenesis // inferred from sequence or structural similarity /// 0061003 // positive regulation of dendritic spine morphogenesis // inferred from sequence or structural similarity /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0043235 // receptor complex // inferred from direct assay","0003723 // RNA binding // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction","chr12:30881312-30884382 (-) // 81.15 // p11.21"]
["11760155_a_at",103.69807,105.56391,100.1678,76.33985,95.087685,96.034836,0.08036423,0.10609245,0.030394554,-0.361516,-0.044693947,-0.030394554,0.397701,0.11958808,1.1629738,0.21781854,1.1629738,"up","FUBP1",8880,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation","chr1:78412168-78444753 (-) // 95.98 // p31.1"]
["11718703_a_at",209.34557,178.51534,162.10332,192.55624,174.71472,175.55626,0.24189615,0.012057781,-0.1270771,0.12128925,-0.018989563,-0.012057304,0.97246444,0.9218085,1.0085003,0.012211567,1.0085003,"up","INO80E",283899,"0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0031011 // Ino80 complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr16:30006913-30017111 (+) // 95.02 // p11.2"]
["11721498_a_at",106.23496,71.38747,63.688602,76.78396,55.310287,47.518986,0.6558337,0.08231735,-0.08231783,0.18745184,-0.28580523,-0.50484896,0.5569768,0.23821537,1.3376294,0.4196785,1.3376294,"up","TPST2",8459,"0006478 // peptidyl-tyrosine sulfation // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008476 // protein-tyrosine sulfotransferase activity // inferred from electronic annotation /// 0008476 // protein-tyrosine sulfotransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation","chr22:26920696-26961370 (-) // 70.34 // q12.1"]
["11732329_a_at",299.6443,216.62897,200.97899,211.89984,153.2428,157.94077,0.5380373,0.070013046,-0.038168907,0.038169384,-0.42939472,-0.38582993,0.40565294,0.124227196,1.3650738,0.44897893,1.3650738,"up","MAP7D1",55700,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","","chr1:36621801-36646448 (+) // 93.77 // p34.3"]
["11741461_a_at",35.128155,36.154636,44.74077,39.59743,43.89408,45.367603,-0.24708891,-0.20553589,0.1018734,-0.074309826,0.074309826,0.12194586,0.5960333,0.2757251,-1.1154035,-0.15756574,1.1154035,"down","PCDHGB2",56103,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr5:140739639-140742196 (+) // 99.96 // q31.3"]
["11744077_at",2582.8025,2580.4321,2532.5825,2188.1025,2315.6924,2323.614,0.090447426,0.08912277,0.062119484,-0.14880943,-0.067046165,-0.062119484,0.07760965,0.004247388,1.1275736,0.17322162,1.1275736,"up","ARPC1B",10095,"0006928 // cellular component movement // traceable author statement /// 0030833 // regulation of actin filament polymerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005885 // Arp2/3 protein complex // traceable author statement /// 0015629 // actin cytoskeleton // traceable author statement","0003779 // actin binding // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement","chr7:98972349-98992421 (+) // 71.18 // q22.1"]
["11717561_s_at",417.17276,325.23718,339.6937,422.55597,384.08157,355.05624,0.17591476,-0.18323803,-0.120495796,0.19441223,0.056682587,-0.056682587,0.7464153,0.46280923,-1.0772928,-0.107410416,1.0772928,"down","DTX3L",151636,"0006974 // response to DNA damage stimulus // inferred from mutant phenotype /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0010390 // histone monoubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0042393 // histone binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:122283084-122294050 (+) // 70.69 // q21.1"]
["11743116_s_at",4705.948,5000.485,5056.4004,3870.0222,4155.2446,4348.2,0.05703354,0.14461517,0.16065788,-0.22511005,-0.12251949,-0.05703354,0.1266311,0.012008873,1.193879,0.25565663,1.193879,"up","KPNB1",3837,"0000060 // protein import into nucleus, translocation // traceable author statement /// 0006309 // apoptotic DNA fragmentation // traceable author statement /// 0006606 // protein import into nucleus // inferred from direct assay /// 0006606 // protein import into nucleus // inferred from electronic annotation /// 0006607 // NLS-bearing substrate import into nucleus // traceable author statement /// 0006610 // ribosomal protein import into nucleus // inferred from direct assay /// 0006610 // ribosomal protein import into nucleus // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral reproduction // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0046796 // viral genome transport in host cell // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005643 // nuclear pore // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0031965 // nuclear membrane // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008139 // nuclear localization sequence binding // traceable author statement /// 0008270 // zinc ion binding // traceable author statement /// 0008565 // protein transporter activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction","chr17:45726830-45762180 (+) // 88.4 // q21.32"]
["11760895_a_at",19.80166,17.066618,14.341533,18.304943,18.245821,16.840656,0.16624975,-0.04819441,-0.29917264,0.05286169,0.04819441,-0.06742334,0.8499412,0.63636714,-1.0508693,-0.07158331,1.0508693,"down","SLC29A1",2030,"0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0015858 // nucleoside transport // inferred from direct assay /// 0015858 // nucleoside transport // inferred from electronic annotation /// 0015858 // nucleoside transport // traceable author statement /// 0015862 // uridine transport // inferred from electronic annotation /// 0030431 // sleep // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from electronic annotation","0005337 // nucleoside transmembrane transporter activity // inferred from electronic annotation /// 0005337 // nucleoside transmembrane transporter activity // traceable author statement","chr6:44194364-44201181 (+) // 85.54 // p21.1"]
["11728590_a_at",107.52519,111.88956,116.89853,114.79234,106.65454,117.4107,-0.075876236,-0.018475533,0.044705868,0.018475533,-0.087605,0.051012993,0.94858176,0.85633236,-1.0073115,-0.010509837,1.0073115,"down","TMEM180",79847,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr10:104221169-104236802 (+) // 81.95 // q24.32"]
["11749453_x_at",132.30351,163.22287,163.01767,164.88953,164.52571,175.53983,-0.30872726,-0.0057349205,-0.0075497627,0.008921623,0.0057349205,0.0992198,0.5582766,0.23958594,-1.1059576,-0.14529611,1.1059576,"down","ZFYVE27",118813,"0008219 // cell death // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from direct assay /// 0048011 // nerve growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0072659 // protein localization in plasma membrane // inferred from sequence or structural similarity","0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0032584 // growth cone membrane // inferred from sequence or structural similarity /// 0032584 // growth cone membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from sequence or structural similarity /// 0055038 // recycling endosome membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:99496877-99519260 (+) // 98.13 // q24.2"]
["11736124_a_at",101.23493,129.22287,117.69009,121.777916,128.55235,123.20054,-0.27492285,0.07723093,-0.057637215,-0.008377552,0.06972599,0.008378029,0.6725793,0.36160925,-1.077996,-0.10835184,1.077996,"down","CPLX2",10814,"0006810 // transport // inferred from electronic annotation /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0006904 // vesicle docking involved in exocytosis // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0016079 // synaptic vesicle exocytosis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031915 // positive regulation of synaptic plasticity // inferred from sequence or structural similarity /// 0031915 // positive regulation of synaptic plasticity // inferred from electronic annotation /// 0043303 // mast cell degranulation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031201 // SNARE complex // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0000149 // SNARE binding // inferred from electronic annotation /// 0017075 // syntaxin-1 binding // inferred from electronic annotation /// 0019905 // syntaxin binding // inferred from electronic annotation","chr5:175223010-175311024 (+) // 93.99 // q35.2"]
["11726291_a_at",23.41412,17.30708,15.561901,18.226612,18.37249,17.444094,0.3929863,-0.043030262,-0.19637442,0.03165388,0.043154716,-0.03165388,0.944832,0.84632474,1.0258423,0.03680898,1.0258423,"up","LRRC17",10234,"0001503 // ossification // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from sequence or structural similarity /// 0033687 // osteoblast proliferation // inferred from sequence or structural similarity /// 0045671 // negative regulation of osteoclast differentiation // inferred from sequence or structural similarity /// 0045671 // negative regulation of osteoclast differentiation // inferred from electronic annotation /// 0048539 // bone marrow development // inferred from sequence or structural similarity /// 0048539 // bone marrow development // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from sequence or structural similarity /// 0005615 // extracellular space // inferred from electronic annotation","","chr7:102553343-102585540 (+) // 97.74 // q22.1"]
["11758239_s_at",41.21594,40.425106,43.012936,53.040222,44.81693,39.628498,-0.03078413,-0.058734894,0.03078413,0.33310032,0.09005737,-0.08744812,0.66531223,0.35127732,-1.095418,-0.13148145,1.095418,"down","C9orf72",203228,"0008219 // cell death // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","","chr9:27547784-27548451 (-) // 97.01 // p21.2"]
["11761765_at",14.306962,13.51902,14.818755,15.927875,14.853482,15.261945,-0.052395344,-0.13412213,-0.0016884804,0.10244107,0.0016884804,0.04082632,0.33268347,0.08369789,-1.080017,-0.11105398,1.080017,"down","HOXA2",3199,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001709 // cell fate determination // inferred from electronic annotation /// 0002076 // osteoblast development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007379 // segment specification // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0009953 // dorsal/ventral pattern formation // inferred from electronic annotation /// 0021568 // rhombomere 2 development // inferred from electronic annotation /// 0021569 // rhombomere 3 development // inferred from electronic annotation /// 0021658 // rhombomere 3 morphogenesis // inferred from electronic annotation /// 0035284 // brain segmentation // inferred from electronic annotation /// 0042474 // middle ear morphogenesis // inferred from electronic annotation /// 0045165 // cell fate commitment // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048703 // embryonic viscerocranium morphogenesis // inferred from electronic annotation /// 0048704 // embryonic skeletal system morphogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr7:27141236-27142302 (-) // 92.69 // p15.2"]
["11717741_x_at",1216.5573,1126.3472,1111.0634,1232.4823,1223.3927,1200.9906,0.0092897415,-0.10186291,-0.12157345,0.02805233,0.017373085,-0.0092897415,0.39739507,0.119354784,-1.0595322,-0.083427384,1.0595322,"down","FUCA2",2519,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006004 // fucose metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004560 // alpha-L-fucosidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0043169 // cation binding // inferred from electronic annotation","chr6:143816063-143833027 (-) // 74.62 // q24.2"]
["11730896_a_at",176.94174,131.19394,137.27003,194.03537,112.923164,131.8266,0.39544535,-0.036127567,0.02918768,0.5284915,-0.25248766,-0.029187202,0.9535128,0.86880755,1.0332788,0.047229607,1.0332788,"up","MAPKAPK2",9261,"0000165 // MAPK cascade // traceable author statement /// 0000187 // activation of MAPK activity // traceable author statement /// 0002224 // toll-like receptor signaling pathway // inferred from sequence or structural similarity /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002224 // toll-like receptor signaling pathway // inferred from electronic annotation /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006692 // prostanoid metabolic process // traceable author statement /// 0006950 // response to stress // inferred from direct assay /// 0006954 // inflammatory response // inferred from sequence or structural similarity /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from mutant phenotype /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0019370 // leukotriene biosynthetic process // traceable author statement /// 0031572 // G2/M transition DNA damage checkpoint // inferred from mutant phenotype /// 0032496 // response to lipopolysaccharide // inferred from sequence or structural similarity /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032675 // regulation of interleukin-6 production // inferred from sequence or structural similarity /// 0032675 // regulation of interleukin-6 production // inferred from electronic annotation /// 0032680 // regulation of tumor necrosis factor production // inferred from direct assay /// 0032680 // regulation of tumor necrosis factor production // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0044351 // macropinocytosis // inferred from sequence or structural similarity /// 0044351 // macropinocytosis // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from mutant phenotype /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048255 // mRNA stabilization // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0070935 // 3'-UTR-mediated mRNA stabilization // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr1:206858288-206907626 (+) // 87.6 // q32.1"]
["11745315_a_at",667.5232,570.73914,591.42316,454.55588,488.55588,443.38922,0.3381405,0.11215401,0.16351318,-0.2162199,-0.11215401,-0.2521038,0.10302479,0.0077005266,1.3177668,0.39809507,1.3177668,"up","CTNNAL1",8727,"0007155 // cell adhesion // inferred from electronic annotation /// 0007266 // Rho protein signal transduction // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0045296 // cadherin binding // inferred from electronic annotation","chr9:111704894-111775778 (-) // 99.75 // q31.3"]
["11719825_a_at",248.03412,241.06065,243.47566,224.52257,267.69733,229.29364,0.033951283,-0.0071907043,0.0071902275,-0.109726906,0.14401531,-0.07939148,0.90980387,0.7609828,1.0184332,0.026351374,1.0184332,"up","ZAK",51776,"0000075 // cell cycle checkpoint // inferred from direct assay /// 0000077 // DNA damage checkpoint // inferred from mutant phenotype /// 0000165 // MAPK cascade // inferred from electronic annotation /// 0000186 // activation of MAPKK activity // inferred from direct assay /// 0000186 // activation of MAPKK activity // traceable author statement /// 0000186 // activation of MAPKK activity // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006950 // response to stress // non-traceable author statement /// 0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from mutant phenotype /// 0007243 // intracellular protein kinase cascade // inferred from direct assay /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // inferred from direct assay /// 0008219 // cell death // non-traceable author statement /// 0008283 // cell proliferation // non-traceable author statement /// 0009314 // response to radiation // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030154 // cell differentiation // non-traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004709 // MAP kinase kinase kinase activity // inferred from direct assay /// 0004709 // MAP kinase kinase kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:173940555-174091874 (+) // 80.78 // q31.1"]
["11741083_x_at",6023.5825,5460.787,5434.682,6279.397,5641.6357,5590.2944,0.10110378,-0.040409088,-0.047323227,0.16110706,0.006593704,-0.006594658,0.79241496,0.5335676,-1.0347232,-0.04924483,1.0347232,"down","EIF4G2",1982,"0006412 // translation // inferred from direct assay /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006446 // regulation of translational initiation // inferred from direct assay /// 0007050 // cell cycle arrest // traceable author statement /// 0008219 // cell death // traceable author statement /// 0016070 // RNA metabolic process // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016281 // eukaryotic translation initiation factor 4F complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008135 // translation factor activity, nucleic acid binding // inferred from direct assay /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement","chr11:10818592-10830582 (-) // 98.37 // p15.3"]
["11724046_a_at",813.2477,773.423,777.9953,692.55615,646.22284,637.05634,0.15210056,0.07966328,0.08816719,-0.07966328,-0.17956257,-0.20017338,0.07615812,0.004008261,1.1972934,0.25977674,1.1972934,"up","BID",637,"0001836 // release of cytochrome c from mitochondria // inferred from direct assay /// 0001836 // release of cytochrome c from mitochondria // inferred from electronic annotation /// 0006626 // protein targeting to mitochondrion // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008625 // induction of apoptosis via death domain receptors // traceable author statement /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0008637 // apoptotic mitochondrial changes // traceable author statement /// 0008637 // apoptotic mitochondrial changes // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032461 // positive regulation of protein oligomerization // inferred from direct assay /// 0032464 // positive regulation of protein homooligomerization // inferred from direct assay /// 0032464 // positive regulation of protein homooligomerization // inferred from electronic annotation /// 0034349 // glial cell apoptotic process // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0046902 // regulation of mitochondrial membrane permeability // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from electronic annotation /// 0051402 // neuron apoptotic process // traceable author statement /// 0090150 // establishment of protein localization in membrane // inferred from direct assay /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from genetic interaction /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from mutant phenotype /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from electronic annotation /// 2000045 // regulation of G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 2001238 // positive regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation /// 0032592 // integral to mitochondrial membrane // inferred from electronic annotation","0005123 // death receptor binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from electronic annotation","chr22:18216907-18256813 (-) // 99.14 // q11.21"]
["11732377_a_at",326.87286,495.1141,498.27234,296.06168,386.31622,437.5682,-0.33091545,0.268116,0.2772894,-0.47374725,-0.08986282,0.08986282,0.7230176,0.42904514,1.1723573,0.22941235,1.1723573,"up","BROX",148362,"","0016020 // membrane // inferred from electronic annotation","","chr1:222885894-222906109 (+) // 98.77 // q41"]
["11749480_a_at",977.60596,843.63226,766.11346,1002.5136,857.49713,809.9675,0.20088005,-0.011758804,-0.15081501,0.2371769,0.011758804,-0.07050896,0.9060337,0.75124276,-1.0329045,-0.046706878,1.0329045,"down","LONP1",9361,"0000002 // mitochondrial genome maintenance // non-traceable author statement /// 0001666 // response to hypoxia // inferred from expression pattern /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006515 // misfolded or incompletely synthesized protein catabolic process // not recorded /// 0007005 // mitochondrion organization // inferred from mutant phenotype /// 0032042 // mitochondrial DNA metabolic process // non-traceable author statement /// 0034599 // cellular response to oxidative stress // inferred by curator /// 0034599 // cellular response to oxidative stress // inferred from direct assay /// 0051260 // protein homooligomerization // inferred from direct assay /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from direct assay /// 0070407 // oxidation-dependent protein catabolic process // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from mutant phenotype /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0042645 // mitochondrial nucleoid // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // not recorded /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0003727 // single-stranded RNA binding // inferred from direct assay /// 0004176 // ATP-dependent peptidase activity // inferred from direct assay /// 0004176 // ATP-dependent peptidase activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // not recorded /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0043531 // ADP binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0051880 // G-quadruplex DNA binding // inferred from direct assay /// 0070182 // DNA polymerase binding // inferred from physical interaction /// 0070361 // mitochondrial light strand promoter anti-sense binding // inferred from direct assay /// 0070361 // mitochondrial light strand promoter anti-sense binding // inferred from electronic annotation /// 0070362 // mitochondrial heavy strand promoter anti-sense binding // inferred from direct assay /// 0070363 // mitochondrial light strand promoter sense binding // inferred from direct assay /// 0070364 // mitochondrial heavy strand promoter sense binding // inferred from direct assay","chr19:5691845-5720157 (-) // 96.88 // p13.3"]
["11716550_at",139.4915,151.58757,165.91478,193.18153,203.08096,208.55618,-0.3600235,-0.24004889,-0.10975742,0.10975695,0.18185472,0.22023582,0.096661255,0.0067801303,-1.3261333,-0.40722573,1.3261333,"down","HES1",3280,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0003151 // outflow tract morphogenesis // inferred from sequence or structural similarity /// 0003151 // outflow tract morphogenesis // inferred from electronic annotation /// 0003266 // regulation of secondary heart field cardioblast proliferation // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from sequence or structural similarity /// 0003281 // ventricular septum development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006461 // protein complex assembly // inferred from sequence or structural similarity /// 0006461 // protein complex assembly // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from direct assay /// 0007219 // Notch signaling pathway // inferred from mutant phenotype /// 0007219 // Notch signaling pathway // traceable author statement /// 0007224 // smoothened signaling pathway // inferred from electronic annotation /// 0007262 // STAT protein import into nucleus // inferred from sequence or structural similarity /// 0007262 // STAT protein import into nucleus // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from sequence or structural similarity /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0021537 // telencephalon development // inferred from electronic annotation /// 0021555 // midbrain-hindbrain boundary morphogenesis // inferred from electronic annotation /// 0021557 // oculomotor nerve development // inferred from electronic annotation /// 0021558 // trochlear nerve development // inferred from electronic annotation /// 0021575 // hindbrain morphogenesis // inferred from electronic annotation /// 0021861 // forebrain radial glial cell differentiation // inferred from sequence or structural similarity /// 0021915 // neural tube development // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0021984 // adenohypophysis development // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030513 // positive regulation of BMP signaling pathway // inferred from electronic annotation /// 0030901 // midbrain development // inferred from electronic annotation /// 0031016 // pancreas development // inferred from electronic annotation /// 0031018 // endocrine pancreas development // traceable author statement /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0042102 // positive regulation of T cell proliferation // inferred from electronic annotation /// 0042491 // auditory receptor cell differentiation // inferred from electronic annotation /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from sequence or structural similarity /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from electronic annotation /// 0042668 // auditory receptor cell fate determination // inferred from electronic annotation /// 0043388 // positive regulation of DNA binding // inferred from sequence or structural similarity /// 0043388 // positive regulation of DNA binding // inferred from electronic annotation /// 0045165 // cell fate commitment // inferred from electronic annotation /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045598 // regulation of fat cell differentiation // inferred from electronic annotation /// 0045608 // negative regulation of auditory receptor cell differentiation // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045747 // positive regulation of Notch signaling pathway // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046331 // lateral inhibition // inferred from electronic annotation /// 0046427 // positive regulation of JAK-STAT cascade // inferred from sequence or structural similarity /// 0046427 // positive regulation of JAK-STAT cascade // inferred from electronic annotation /// 0048469 // cell maturation // inferred from electronic annotation /// 0048505 // regulation of timing of cell differentiation // inferred from electronic annotation /// 0048538 // thymus development // inferred from sequence or structural similarity /// 0048538 // thymus development // inferred from electronic annotation /// 0048667 // cell morphogenesis involved in neuron differentiation // inferred from electronic annotation /// 0048711 // positive regulation of astrocyte differentiation // inferred from sequence or structural similarity /// 0048711 // positive regulation of astrocyte differentiation // inferred from electronic annotation /// 0048715 // negative regulation of oligodendrocyte differentiation // inferred from sequence or structural similarity /// 0048715 // negative regulation of oligodendrocyte differentiation // inferred from electronic annotation /// 0048844 // artery morphogenesis // inferred from sequence or structural similarity /// 0048844 // artery morphogenesis // inferred from electronic annotation /// 0050767 // regulation of neurogenesis // inferred from electronic annotation /// 0060037 // pharyngeal system development // inferred from sequence or structural similarity /// 0060037 // pharyngeal system development // inferred from electronic annotation /// 0060164 // regulation of timing of neuron differentiation // inferred from electronic annotation /// 0060253 // negative regulation of glial cell proliferation // inferred from sequence or structural similarity /// 0060253 // negative regulation of glial cell proliferation // inferred from electronic annotation /// 0060675 // ureteric bud morphogenesis // inferred from electronic annotation /// 0061009 // common bile duct development // inferred from electronic annotation /// 0061106 // negative regulation of stomach neuroendocrine cell differentiation // inferred from electronic annotation /// 0061309 // cardiac neural crest cell development involved in outflow tract morphogenesis // inferred from electronic annotation /// 0072012 // glomerulus vasculature development // inferred from electronic annotation /// 0072049 // comma-shaped body morphogenesis // inferred from electronic annotation /// 0072050 // S-shaped body morphogenesis // inferred from electronic annotation /// 0072141 // renal interstitial cell development // inferred from electronic annotation /// 0072282 // metanephric nephron tubule morphogenesis // inferred from electronic annotation /// 0090102 // cochlea development // inferred from electronic annotation /// 0097084 // vascular smooth muscle cell development // inferred from sequence or structural similarity /// 0097084 // vascular smooth muscle cell development // inferred from electronic annotation /// 0097150 // neuronal stem cell maintenance // inferred from expression pattern /// 0097150 // neuronal stem cell maintenance // inferred from electronic annotation /// 2000227 // negative regulation of pancreatic A cell differentiation // inferred from electronic annotation /// 2000737 // negative regulation of stem cell differentiation // inferred from mutant phenotype /// 2000974 // negative regulation of pro-B cell differentiation // inferred from mutant phenotype /// 2000978 // negative regulation of forebrain neuron differentiation // inferred from sequence or structural similarity /// 2000981 // negative regulation of inner ear receptor cell differentiation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from sequence or structural similarity /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // non-traceable author statement /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from sequence or structural similarity /// 0071820 // N-box binding // inferred from sequence or structural similarity /// 0071820 // N-box binding // inferred from electronic annotation","chr3:193853930-193856396 (+) // 91.83 // q29"]
["11734790_at",147.29604,133.64857,147.49094,137.91325,128.83177,141.90868,0.07435703,-0.06591749,0.07626486,-0.020600796,-0.11887264,0.020600796,0.6556804,0.33983347,1.0481601,0.06785906,1.0481601,"up","SRR",63826,"0006520 // cellular amino acid metabolic process // inferred from electronic annotation /// 0006563 // L-serine metabolic process // inferred from direct assay /// 0006563 // L-serine metabolic process // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009069 // serine family amino acid metabolic process // inferred from sequence or structural similarity /// 0009069 // serine family amino acid metabolic process // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from expression pattern /// 0042493 // response to drug // inferred from electronic annotation /// 0042866 // pyruvate biosynthetic process // inferred from direct assay /// 0043278 // response to morphine // inferred from electronic annotation /// 0051289 // protein homotetramerization // inferred from electronic annotation /// 0051289 // protein homotetramerization // inferred from sequence or structural similarity /// 0070178 // D-serine metabolic process // inferred from direct assay /// 0070178 // D-serine metabolic process // inferred from electronic annotation /// 0070179 // D-serine biosynthetic process // inferred from direct assay /// 0070179 // D-serine biosynthetic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from direct assay /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003941 // L-serine ammonia-lyase activity // inferred from direct assay /// 0003941 // L-serine ammonia-lyase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0008721 // D-serine ammonia-lyase activity // inferred from electronic annotation /// 0016594 // glycine binding // inferred from electronic annotation /// 0016594 // glycine binding // inferred from sequence or structural similarity /// 0016829 // lyase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0018114 // threonine racemase activity // inferred from electronic annotation /// 0018114 // threonine racemase activity // inferred from sequence or structural similarity /// 0030165 // PDZ domain binding // inferred from physical interaction /// 0030170 // pyridoxal phosphate binding // inferred from direct assay /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from sequence or structural similarity /// 0030378 // serine racemase activity // inferred from direct assay /// 0030378 // serine racemase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:2206959-2228553 (+) // 89.66 // p13.3"]
["11742967_a_at",29.434467,27.820072,29.74946,31.30046,32.130016,33.591724,-0.052017212,-0.13339758,-0.036660194,0.036660194,0.07439804,0.13858223,0.16435787,0.020463629,-1.1151506,-0.15723851,1.1151506,"down","MTERFD2",130916,"0006390 // transcription from mitochondrial promoter // inferred from electronic annotation /// 0006626 // protein targeting to mitochondrion // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0042255 // ribosome assembly // inferred from electronic annotation /// 0043010 // camera-type eye development // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005762 // mitochondrial large ribosomal subunit // inferred from direct assay","0019843 // rRNA binding // inferred from direct assay","chr2:242026510-242041714 (-) // 87.6 // q37.3"]
["11751461_a_at",8.088752,7.7088037,9.158651,7.1943326,8.027337,6.824614,0.040202856,-0.02920723,0.21942115,-0.12885332,0.02920723,-0.20496678,0.4491428,0.1528267,1.1315836,0.17834313,1.1315836,"up","C11orf65",160140,"","","","chr11:108179245-108338258 (-) // 100.0 // q22.3"]
["11730168_s_at",2472.576,2004.7065,2003.5381,2653.2935,2055.2366,2031.4158,0.27511978,-0.027503967,-0.028345108,0.37688923,0.0084095,-0.0084095,0.9097844,0.7609276,-1.0370889,-0.052539527,1.0370889,"down",-0.028345108,"LITAF",9516,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from mutant phenotype /// 0050699 // WW domain binding // inferred from physical interaction"]
["11728135_at",76.869125,75.19103,73.24986,85.43449,88.503685,88.85732,-0.076206684,-0.10804987,-0.14578533,0.07620716,0.1271267,0.13287973,0.044074457,0.0011900761,-1.1664182,-0.22208513,1.1664182,"down","NIPAL4",348938,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015693 // magnesium ion transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr5:156887026-156901729 (+) // 98.76 // q33.3"]
["11759292_at",36.635864,33.666786,38.792957,46.545654,33.348373,38.290432,-0.03186369,-0.15379429,0.05067444,0.31352615,-0.16750383,0.03186369,0.7898709,0.52944267,-1.0749651,-0.104289845,1.0749651,"down","FAM63A",55793,"","","","chr1:150965685-150980225 (-) // 78.72 // q21.3"]
["11762134_at",45.002876,49.972057,54.97183,52.00446,55.390762,62.903988,-0.24864674,-0.097542286,0.040028095,-0.040028572,0.05098152,0.23448753,0.49660105,0.18827662,-1.1359247,-0.1838672,1.1359247,"down","ZNF76",7629,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006359 // regulation of transcription from RNA polymerase III promoter // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:35226685-35256092 (+) // 93.64 // p21.31"]
["11732848_a_at",28.196596,23.354853,26.24669,25.547527,27.387089,29.151604,0.07270527,-0.19909334,-0.03068018,-0.06963205,0.03068018,0.12075949,0.74178904,0.45532665,-1.0567435,-0.07962524,1.0567435,"down","PRELID2",153768,"","0005739 // mitochondrion // inferred from electronic annotation","","chr5:145137894-145214899 (-) // 70.42 // q32"]
["11763606_a_at",76.508965,62.38421,67.68458,82.38957,68.88959,71.54545,0.12405586,-0.17039204,-0.052745342,0.23088884,-0.027287483,0.027287006,0.70032066,0.39732334,-1.0792208,-0.10999002,1.0792208,"down","VAV1",7409,"0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006909 // phagocytosis // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0031295 // T cell costimulation // traceable author statement /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042110 // T cell activation // inferred from electronic annotation /// 0043087 // regulation of GTPase activity // inferred from electronic annotation /// 0045785 // positive regulation of cell adhesion // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement","0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0030676 // Rac guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:6826689-6854111 (+) // 98.27 // p13.3"]
["11720257_a_at",128.24536,153.90984,154.34967,174.23227,161.31656,157.35947,-0.28122663,-0.01804781,-0.013930798,0.16087866,0.049761295,0.013930798,0.43654042,0.14402874,-1.1323019,-0.1792587,1.1323019,"down","TRAPPC6B",122553,"0006810 // transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation","","chr14:39617014-39640038 (-) // 67.79 // q21.1"]
["11744010_x_at",94.93535,104.80779,96.49195,90.750656,91.733315,101.94324,-0.011731625,0.13099718,0.011731625,-0.076768875,-0.061231136,0.09101772,0.73152155,0.44087526,1.0419792,0.05932647,1.0419792,"up","TMEM175",84286,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr4:926174-952444 (+) // 97.13 // p16.3"]
["11729079_s_at",9.300027,10.195529,9.074627,8.210396,10.304997,9.25801,0.0032663345,0.13589644,-0.032130003,-0.17651653,0.151304,-0.003266096,0.8797988,0.6962336,1.031805,0.045170397,1.031805,"up","ESRRG",2104,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0048384 // retinoic acid receptor signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0003708 // retinoic acid receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005496 // steroid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050682 // AF-2 domain binding // inferred from sequence or structural similarity","chr1:216676587-217262976 (-) // 94.01 // q41"]
["11720254_a_at",250.4454,195.27715,197.65552,223.96329,200.94046,210.87447,0.28291988,-0.07605314,-0.058588028,0.12168646,-0.03480816,0.03480816,0.981657,0.94700533,1.006163,0.008864044,1.006163,"up","CNNM4",26504,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0031214 // biomineral tissue development // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:97426638-97477611 (+) // 94.71 // q11.2"]
["11721834_a_at",193.7121,177.4551,172.10225,195.27055,178.0147,160.36694,0.1241889,-0.0022711754,-0.046459198,0.13574886,0.0022711754,-0.14834833,0.9176251,0.782141,1.0200187,0.028595597,1.0200187,"up","GET4 /// SUN1","23353 /// 51608","0006810 // transport // inferred from electronic annotation /// 0006998 // nuclear envelope organization // inferred from genetic interaction /// 0006998 // nuclear envelope organization // inferred from electronic annotation /// 0071816 // tail-anchored membrane protein insertion into ER membrane // inferred from mutant phenotype /// 0090286 // cytoskeletal anchoring at nuclear membrane // inferred from direct assay /// 0090292 // nuclear matrix anchoring at nuclear membrane // inferred from direct assay","0002080 // acrosomal membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005639 // integral to nuclear inner membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay /// 0034993 // SUN-KASH complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0071818 // BAT3 complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0005521 // lamin binding // inferred from electronic annotation","chr7:916185-936071 (+) // 90.3 // p22.3"]
["11742731_at",503.09717,525.8451,517.2904,511.74588,499.72964,522.4558,-0.03236389,0.03143692,0.0077733994,-0.0077733994,-0.042053223,0.022108078,0.87352455,0.6836584,1.0080181,0.0115215955,1.0080181,"up","SURF6",6838,"0042254 // ribosome biogenesis // inferred from electronic annotation","0001652 // granular component // inferred from sequence or structural similarity /// 0001652 // granular component // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // traceable author statement /// 0005730 // nucleolus // inferred from electronic annotation /// 0044451 // nucleoplasm part // inferred from electronic annotation","0003677 // DNA binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from sequence or structural similarity /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement","chr9:136196985-136203222 (-) // 93.3 // q34.2"]
["11718393_s_at",502.4584,626.9609,645.15106,575.05676,732.2233,642.5591,-0.33709812,-0.017726898,0.023534775,-0.14239788,0.20618153,0.017726898,0.7144364,0.41680157,-1.1000738,-0.13760033,1.1000738,"down","PREPL",9581,"0006508 // proteolysis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr2:44545902-44588010 (-) // 83.12 // p21"]
["11722510_at",2600.747,1917.688,1972.5505,2561.9568,2147.253,2061.099,0.30597305,-0.13358498,-0.09289074,0.28429317,0.029539108,-0.029539108,0.8857288,0.70870435,-1.0484552,-0.06826527,1.0484552,"down","CRTC3",64784,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0032793 // positive regulation of CREB transcription factor activity // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051289 // protein homotetramerization // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0008140 // cAMP response element binding protein binding // inferred from electronic annotation","chr15:91073156-91188577 (+) // 95.0 // q26.1"]
["11742801_a_at",328.38434,260.63388,254.3103,309.7879,271.44974,266.82703,0.2870903,-0.04627037,-0.08170509,0.20298576,0.012390137,-0.012390137,0.97157013,0.91940325,-1.0101879,-0.014623615,1.0101879,"down","MAP2K3",5606,"0000165 // MAPK cascade // inferred from electronic annotation /// 0000187 // activation of MAPK activity // traceable author statement /// 0000187 // activation of MAPK activity // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0042035 // regulation of cytokine biosynthetic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045860 // positive regulation of protein kinase activity // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0060048 // cardiac muscle contraction // inferred from electronic annotation","0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004708 // MAP kinase kinase activity // inferred from electronic annotation /// 0004708 // MAP kinase kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from electronic annotation","chr17:21187957-21218552 (+) // 93.66 // p11.2"]
["11757854_s_at",234.27618,251.03223,270.96695,266.17838,266.97418,263.64447,-0.17728376,-0.07762098,0.03262329,0.0068998337,0.011206627,-0.0068998337,0.58951145,0.27015248,-1.0554289,-0.07782934,1.0554289,"down","PLEKHA5",54477,"","","0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0005545 // 1-phosphatidylinositol binding // non-traceable author statement","chr12:19528638-19529334 (+) // 92.82 // p12.3"]
["11741257_x_at",20.328707,26.047552,27.48426,24.816132,21.853058,23.379799,-0.24475193,0.11287737,0.19033527,0.04300785,-0.14043522,-0.04300785,0.8664075,0.66934127,1.047027,0.066298634,1.047027,"up","APOBEC3F",200316,"0002230 // positive regulation of defense response to virus by host // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0009615 // response to virus // inferred from electronic annotation /// 0009972 // cytidine deamination // inferred from direct assay /// 0010529 // negative regulation of transposition // inferred from direct assay /// 0016553 // base conversion or substitution editing // inferred from direct assay /// 0045071 // negative regulation of viral genome replication // inferred from direct assay /// 0045087 // innate immune response // inferred from direct assay /// 0045869 // negative regulation of retroviral genome replication // inferred from direct assay /// 0048525 // negative regulation of viral reproduction // inferred from direct assay /// 0080111 // DNA demethylation // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030895 // apolipoprotein B mRNA editing enzyme complex // traceable author statement","0003723 // RNA binding // inferred from direct assay /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004126 // cytidine deaminase activity // inferred from direct assay /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016814 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr22:39436672-39451973 (+) // 43.37 // q13.1"]
["11746431_a_at",119.72287,99.648544,90.93931,113.38857,101.389534,81.099464,0.25228405,-0.012494087,-0.14443874,0.17386055,0.012494087,-0.3096509,0.8869665,0.7120512,1.0518161,0.072882496,1.0518161,"up","FBXO11",80204,"0006464 // cellular protein modification process // inferred from direct assay /// 0006511 // ubiquitin-dependent protein catabolic process // non-traceable author statement /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0016567 // protein ubiquitination // non-traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0035246 // peptidyl-arginine N-methylation // inferred from direct assay","0000151 // ubiquitin ligase complex // non-traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // non-traceable author statement /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016274 // protein-arginine N-methyltransferase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:48034775-48132932 (-) // 92.73 // p16.3"]
["11750480_a_at",123.0352,113.232925,123.22632,115.06132,94.34241,107.000885,0.10822296,-0.011554718,0.11046219,0.011554718,-0.27486992,-0.09322548,0.3869188,0.11309519,1.1390969,0.18789043,1.1390969,"up","ATF2",1386,"0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0003151 // outflow tract morphogenesis // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred by curator /// 0006366 // transcription from RNA polymerase II promoter // inferred by curator /// 0006970 // response to osmotic stress // inferred from direct assay /// 0008063 // Toll signaling pathway // traceable author statement /// 0032915 // positive regulation of transforming growth factor beta2 production // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0060612 // adipose tissue development // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay","0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from direct assay /// 0001076 // RNA polymerase II transcription factor binding transcription factor activity // inferred by curator /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0001102 // RNA polymerase II activating transcription factor binding // inferred from physical interaction /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred by curator /// 0003713 // transcription coactivator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008140 // cAMP response element binding protein binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0035497 // cAMP response element binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr2:175978970-176032897 (-) // 94.46 // q31.1"]
["11720501_a_at",950.6665,738.3939,722.2756,721.2374,636.5478,615.6813,0.39742756,0.032878876,0.0010375977,-0.0010375977,-0.18124294,-0.22932816,0.40593442,0.12450088,1.2150235,0.28098422,1.2150235,"up","UBE4B",10277,"0000209 // protein polyubiquitination // inferred from electronic annotation /// 0003222 // ventricular trabecula myocardium morphogenesis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from direct assay /// 0009411 // response to UV // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0034976 // response to endoplasmic reticulum stress // inferred from electronic annotation /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // traceable author statement /// 0044257 // cellular protein catabolic process // inferred from electronic annotation","0000151 // ubiquitin ligase complex // traceable author statement /// 0000151 // ubiquitin ligase complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from sequence or structural similarity /// 0019899 // enzyme binding // inferred from electronic annotation /// 0034450 // ubiquitin-ubiquitin ligase activity // inferred from electronic annotation","chr1:10093010-10241297 (+) // 99.01 // p36.22"]
["11739795_a_at",60.938908,77.52283,73.38792,65.89879,77.83076,81.75209,-0.30771828,0.039539337,-0.039539337,-0.19483042,0.045258045,0.116173744,0.8034288,0.5521628,-1.065433,-0.0914399,1.065433,"down","RHBDF2",79651,"0006508 // proteolysis // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0050709 // negative regulation of protein secretion // inferred from sequence or structural similarity /// 0050709 // negative regulation of protein secretion // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from sequence or structural similarity /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from electronic annotation","chr17:74466975-74497872 (-) // 99.55 // q25.1"]
["11742664_x_at",14.07043,13.45821,12.787495,14.367608,12.61693,12.736191,0.10105634,0.03687644,-0.03687668,0.13120961,-0.05624914,-0.04267621,0.9120859,0.76711655,1.0160166,0.022923976,1.0160166,"up","","","","","","chr7:28318841-28319318 (-) // 100.0 // p15.1"]
["11731638_a_at",34.351055,37.4695,37.190647,35.609955,35.90136,33.045937,-0.05780506,0.067557335,0.05678034,-0.0058789253,0.0058789253,-0.11368656,0.6543418,0.33831838,1.0425185,0.06007298,1.0425185,"up","GAB1",2549,"0000187 // activation of MAPK activity // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008544 // epidermis development // inferred from electronic annotation /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0060711 // labyrinthine layer development // inferred from electronic annotation /// 0070102 // interleukin-6-mediated signaling pathway // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation","chr4:144257557-144395718 (+) // 96.62 // q31.21"]
["11758163_s_at",305.00827,271.70645,272.15765,360.63324,302.67642,279.56036,0.068380356,-0.09841919,-0.09602547,0.31006432,0.057308197,-0.057308197,0.6184145,0.2984465,-1.106019,-0.14537619,1.106019,"down","ZFP62",643836,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:180274614-180276504 (-) // 99.63 // q35.3"]
["11759983_at",43.524395,47.47205,48.48012,37.87877,47.311417,46.517307,-0.10815382,0.017100334,0.047415257,-0.3085885,0.012210369,-0.012210369,0.7583701,0.48020127,1.0631291,0.08831675,1.0631291,"up","VTI1A",143187,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0042147 // retrograde transport, endosome to Golgi // inferred from direct assay /// 0042147 // retrograde transport, endosome to Golgi // inferred from mutant phenotype /// 0048280 // vesicle fusion with Golgi apparatus // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0031201 // SNARE complex // traceable author statement /// 0031201 // SNARE complex // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0005484 // SNAP receptor activity // inferred from direct assay","chr10:114207015-114497532 (+) // 60.61 // q25.2"]
["11753948_a_at",177.34761,190.55432,196.70505,147.49689,203.086,233.67723,-0.12653875,-0.022915363,0.02291584,-0.39243412,0.06897259,0.27139902,0.9671448,0.9078192,-1.0173565,-0.024825335,1.0173565,"down","FBXW8",26259,"0060712 // spongiotrophoblast layer development // inferred from electronic annotation /// 0060716 // labyrinthine layer blood vessel development // inferred from electronic annotation","0019005 // SCF ubiquitin ligase complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr12:117348769-117470625 (+) // 82.45 // q24.22"]
["11763598_a_at",29.01448,23.383911,29.888168,18.232836,26.773352,29.417854,0.05798769,-0.2532692,0.10078907,-0.6122465,-0.05798769,0.07790661,0.7872782,0.5252866,1.1219008,0.16594511,1.1219008,"up","","","","","","chr8:10983979-10987745 (-) // 61.36 // p23.1"]
["11750772_a_at",10.086448,9.588907,11.45619,9.735383,10.021788,9.989726,0.011590004,-0.061389685,0.19529915,-0.039518356,0.0023114681,-0.0023112297,0.75183845,0.47073162,1.043675,0.061672453,1.043675,"up","PDGFRA",5156,"0001553 // luteinization // inferred from sequence or structural similarity /// 0001553 // luteinization // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001775 // cell activation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from mutant phenotype /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008210 // estrogen metabolic process // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008585 // female gonad development // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // inferred from electronic annotation /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010035 // response to inorganic substance // inferred from electronic annotation /// 0010544 // negative regulation of platelet activation // inferred from direct assay /// 0010863 // positive regulation of phospholipase C activity // inferred from mutant phenotype /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0023019 // signal transduction involved in regulation of gene expression // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030325 // adrenal gland development // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0030539 // male genitalia development // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0033327 // Leydig cell differentiation // inferred from electronic annotation /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0035790 // platelet-derived growth factor receptor-alpha signaling pathway // inferred from direct assay /// 0035790 // platelet-derived growth factor receptor-alpha signaling pathway // inferred from mutant phenotype /// 0035790 // platelet-derived growth factor receptor-alpha signaling pathway // inferred from electronic annotation /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from electronic annotation /// 0038091 // positive regulation of cell proliferation by VEGF-activated platelet derived growth factor receptor signaling pathway // inferred from direct assay /// 0042060 // wound healing // inferred from sequence or structural similarity /// 0042060 // wound healing // inferred from electronic annotation /// 0042063 // gliogenesis // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from mutant phenotype /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from direct assay /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from electronic annotation /// 0048015 // phosphatidylinositol-mediated signaling // inferred from mutant phenotype /// 0048146 // positive regulation of fibroblast proliferation // inferred from direct assay /// 0048557 // embryonic digestive tract morphogenesis // inferred from sequence or structural similarity /// 0048557 // embryonic digestive tract morphogenesis // inferred from electronic annotation /// 0048701 // embryonic cranial skeleton morphogenesis // inferred from sequence or structural similarity /// 0048701 // embryonic cranial skeleton morphogenesis // inferred from electronic annotation /// 0048704 // embryonic skeletal system morphogenesis // inferred from sequence or structural similarity /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0050920 // regulation of chemotaxis // inferred from mutant phenotype /// 0055003 // cardiac myofibril assembly // inferred from sequence or structural similarity /// 0055003 // cardiac myofibril assembly // inferred from electronic annotation /// 0055093 // response to hyperoxia // inferred from electronic annotation /// 0060021 // palate development // inferred from electronic annotation /// 0060325 // face morphogenesis // inferred from electronic annotation /// 0060326 // cell chemotaxis // inferred from mutant phenotype /// 0060326 // cell chemotaxis // inferred from electronic annotation /// 0061298 // retina vasculature development in camera-type eye // inferred from sequence or structural similarity /// 0061298 // retina vasculature development in camera-type eye // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from mutant phenotype /// 0070527 // platelet aggregation // inferred from mutant phenotype /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation /// 0072277 // metanephric glomerular capillary formation // inferred from sequence or structural similarity /// 0072277 // metanephric glomerular capillary formation // inferred from electronic annotation /// 2000249 // regulation of actin cytoskeleton reorganization // traceable author statement /// 2000739 // regulation of mesenchymal stem cell differentiation // inferred from mutant phenotype","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031226 // intrinsic to plasma membrane // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from direct assay /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005018 // platelet-derived growth factor alpha-receptor activity // inferred from direct assay /// 0005018 // platelet-derived growth factor alpha-receptor activity // inferred from mutant phenotype /// 0005018 // platelet-derived growth factor alpha-receptor activity // inferred from electronic annotation /// 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from direct assay /// 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from electronic annotation /// 0005161 // platelet-derived growth factor receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0038085 // vascular endothelial growth factor binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation /// 0048407 // platelet-derived growth factor binding // inferred from direct assay /// 0048407 // platelet-derived growth factor binding // inferred from physical interaction /// 0048407 // platelet-derived growth factor binding // inferred from electronic annotation","chr4:55095446-55131514 (+) // 90.11 // q12"]
["11715767_s_at",1112.7009,1104.0305,1043.9672,974.96515,976.77136,982.1492,0.13602066,0.12473488,0.044031143,-0.05462265,-0.051952362,-0.044031143,0.094827026,0.0064749955,1.1109529,0.1517976,1.1109529,"up","ACAA2",10449,"0006084 // acetyl-CoA metabolic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006635 // fatty acid beta-oxidation // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // non-traceable author statement /// 0006916 // anti-apoptosis // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0003988 // acetyl-CoA C-acyltransferase activity // non-traceable author statement /// 0003988 // acetyl-CoA C-acyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation","chr18:47309728-47340330 (-) // 93.3 // q21.1"]
["11742445_at",14.891574,14.755995,11.766867,15.108086,13.453958,15.95929,0.0065977573,-0.006597519,-0.3331685,0.027421951,-0.13986826,0.106497526,0.7429156,0.45742628,-1.0785351,-0.1090731,1.0785351,"down","","","0007155 // cell adhesion // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr16:819427-832926 (-) // 100.0 // p13.3"]
["11736878_a_at",15.479343,17.513134,15.462787,15.227136,19.434834,15.031255,0.00077199936,0.17886496,-0.00077199936,-0.022928,0.32907248,-0.041606903,0.9433236,0.8422403,-1.0199918,-0.02855749,1.0199918,"down","GPLD1",2822,"0001503 // ossification // inferred from sequence or structural similarity /// 0002042 // cell migration involved in sprouting angiogenesis // inferred from mutant phenotype /// 0002062 // chondrocyte differentiation // inferred from sequence or structural similarity /// 0002430 // complement receptor mediated signaling pathway // inferred from direct assay /// 0006507 // GPI anchor release // inferred from direct assay /// 0006507 // GPI anchor release // inferred from mutant phenotype /// 0006507 // GPI anchor release // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008286 // insulin receptor signaling pathway // inferred from direct assay /// 0009749 // response to glucose stimulus // inferred from direct assay /// 0010595 // positive regulation of endothelial cell migration // inferred from mutant phenotype /// 0010694 // positive regulation of alkaline phosphatase activity // inferred from sequence or structural similarity /// 0010867 // positive regulation of triglyceride biosynthetic process // inferred from sequence or structural similarity /// 0010897 // negative regulation of triglyceride catabolic process // inferred from sequence or structural similarity /// 0010907 // positive regulation of glucose metabolic process // inferred from sequence or structural similarity /// 0010983 // positive regulation of high-density lipoprotein particle clearance // inferred from sequence or structural similarity /// 0032869 // cellular response to insulin stimulus // inferred from direct assay /// 0035690 // cellular response to drug // inferred from direct assay /// 0035701 // hematopoietic stem cell migration // traceable author statement /// 0035774 // positive regulation of insulin secretion involved in cellular response to glucose stimulus // inferred from sequence or structural similarity /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0045919 // positive regulation of cytolysis // inferred from direct assay /// 0046470 // phosphatidylcholine metabolic process // inferred from sequence or structural similarity /// 0046470 // phosphatidylcholine metabolic process // traceable author statement /// 0051044 // positive regulation of membrane protein ectodomain proteolysis // inferred from direct assay /// 0051047 // positive regulation of secretion // inferred from sequence or structural similarity /// 0070633 // transepithelial transport // inferred from sequence or structural similarity /// 0071277 // cellular response to calcium ion // inferred from direct assay /// 0071397 // cellular response to cholesterol // inferred from mutant phenotype /// 0071401 // cellular response to triglyceride // inferred from mutant phenotype /// 0071467 // cellular response to pH // inferred from direct assay /// 0097241 // hematopoietic stem cell migration to bone marrow // traceable author statement /// 1900076 // regulation of cellular response to insulin stimulus // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from sequence or structural similarity /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005622 // intracellular // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005792 // microsome // inferred from direct assay /// 0044444 // cytoplasmic part // inferred from direct assay","0004621 // glycosylphosphatidylinositol phospholipase D activity // inferred from direct assay /// 0004621 // glycosylphosphatidylinositol phospholipase D activity // traceable author statement /// 0004621 // glycosylphosphatidylinositol phospholipase D activity // inferred from electronic annotation /// 0004630 // phospholipase D activity // inferred from direct assay /// 0004630 // phospholipase D activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation /// 0017080 // sodium channel regulator activity // inferred from sequence or structural similarity","chr6:24428404-24489850 (-) // 90.09 // p22.3"]
["11742633_at",22.932419,30.26119,30.669588,25.097807,28.10597,32.63135,-0.3467841,0.05329609,0.07263613,-0.21661139,-0.05329609,0.16208601,0.942573,0.8402921,-1.0264596,-0.03767681,1.0264596,"down","OR4K13",390433,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr14:20502002-20502917 (-) // 100.0 // q11.2"]
["11749343_a_at",144.54105,157.77151,147.94754,148.71982,131.84651,154.0022,-0.0373621,0.08899498,-0.0037555695,0.0037555695,-0.16998196,0.054109573,0.79025406,0.5301311,1.0376582,0.053331323,1.0376582,"up","ABHD4",63874,"0016042 // lipid catabolic process // inferred from electronic annotation","","0016787 // hydrolase activity // inferred from electronic annotation","chr14:23067206-23073161 (+) // 93.19 // q11.2"]
["11726411_a_at",100.389534,110.388794,101.956215,97.376366,109.69027,142.33586,-0.07508373,0.061901093,-0.05274248,-0.119048595,0.05274248,0.4286065,0.7319032,0.4413349,-1.1040013,-0.14274184,1.1040013,"down","ZBTB7C",201501,"","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr18:45553257-45691937 (-) // 93.97 // q21.1"]
["11740863_at",9.88743,8.390952,10.560056,7.4963126,7.4934053,8.540831,0.22398996,-0.012770891,0.31893992,-0.17542458,-0.17598414,0.012770891,0.30012918,0.06846952,1.2223004,0.2895989,1.2223004,"up","TPH1",7166,"0006950 // response to stress // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009072 // aromatic amino acid family metabolic process // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042427 // serotonin biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046219 // indolalkylamine biosynthetic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060749 // mammary gland alveolus development // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0043005 // neuron projection // inferred from electronic annotation","0004497 // monooxygenase activity // inferred from electronic annotation /// 0004510 // tryptophan 5-monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016714 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:18041956-18063975 (-) // 99.5 // p15.1"]
["11752755_a_at",63.722965,55.092606,59.1413,77.52662,54.6752,52.156628,0.15880108,-0.051153183,0.05115366,0.44167948,-0.06212473,-0.13016129,0.9583943,0.8815841,-1.0211518,-0.03019732,1.0211518,"down","MTRF1",9617,"0006412 // translation // inferred from electronic annotation /// 0006415 // translational termination // inferred from electronic annotation /// 0006449 // regulation of translational termination // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement","0003747 // translation release factor activity // traceable author statement /// 0003747 // translation release factor activity // inferred from electronic annotation /// 0016149 // translation release factor activity, codon specific // inferred from electronic annotation","chr13:41826418-41837705 (-) // 72.7 // q14.11"]
["11728124_a_at",81.29424,69.6464,61.89769,82.28298,74.20624,70.98211,0.16365528,-0.059449196,-0.22961235,0.18109608,0.032042027,-0.032042503,0.7555028,0.47650373,-1.0733848,-0.10216731,1.0733848,"down","C16orf79",283870,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr16:2259253-2261317 (-) // 87.37 // p13.3"]
["11738984_x_at",1389.3801,1235.3893,1291.9169,1147.2402,973.08954,1001.38965,0.22287464,0.053399086,0.117946625,-0.053399086,-0.29092216,-0.24956322,0.16365589,0.020333156,1.256463,0.32936823,1.256463,"up","MAP1LC3B",81631,"0006914 // autophagy // inferred from electronic annotation","0000421 // autophagic vacuole membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005776 // autophagic vacuole // inferred from sequence or structural similarity /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031090 // organelle membrane // inferred from sequence or structural similarity /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr16:87425405-87438380 (+) // 86.34 // q24.2"]
["11757900_a_at",129.74474,103.55624,102.56656,115.500374,92.724594,92.9614,0.3321886,0.0069270134,-0.0069274902,0.16441011,-0.15246391,-0.1487832,0.6747456,0.36367553,1.1144576,0.15634173,1.1144576,"up","SEBOX /// VTN","645832 /// 7448","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from direct assay /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0010811 // positive regulation of cell-substrate adhesion // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from direct assay /// 0014911 // positive regulation of smooth muscle cell migration // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030195 // negative regulation of blood coagulation // inferred by curator /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // traceable author statement /// 0032092 // positive regulation of protein binding // inferred from direct assay /// 0033627 // cell adhesion mediated by integrin // inferred from direct assay /// 0048260 // positive regulation of receptor-mediated endocytosis // inferred from direct assay /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0061302 // smooth muscle cell-matrix adhesion // inferred from direct assay /// 0090303 // positive regulation of wound healing // inferred by curator","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0071062 // alphav-beta3 integrin-vitronectin complex // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005044 // scavenger receptor activity // inferred from electronic annotation /// 0005178 // integrin binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0030247 // polysaccharide binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050840 // extracellular matrix binding // inferred from electronic annotation","chr17:26694305-26694974 (-) // 96.45 // q11.2"]
["11722691_at",422.14194,409.43246,392.81372,360.84763,348.5081,336.88235,0.16511059,0.12100792,0.0612278,-0.0612278,-0.1114254,-0.16037273,0.08746394,0.005470318,1.170229,0.22679082,1.170229,"up","AVEN",57099,"0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from direct assay","0005622 // intracellular // inferred from direct assay /// 0005624 // membrane fraction // inferred from direct assay /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr15:34158194-34331406 (-) // 97.65 // q14"]
["11758372_s_at",1792.006,1909.726,1893.1622,1794.8062,1938.428,2142.1208,-0.08550644,0.00628376,-0.00628376,-0.08325386,0.027805328,0.17195797,0.73363644,0.44346425,-1.0477821,-0.06733867,1.0477821,"down","EI24",9538,"0006914 // autophagy // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","","chr11:125452238-125454066 (+) // 92.82 // q24.2"]
["11724590_a_at",70.537094,57.154015,58.977646,67.29517,57.578293,58.609364,0.2627325,-0.04079485,0.004518509,0.19485283,-0.030125141,-0.0045189857,0.9500268,0.86099964,1.0154241,0.022082452,1.0154241,"up","TCP10L",140290,"","0005634 // nucleus // inferred from electronic annotation","","chr21:33947151-33957837 (-) // 98.24 // q22.11"]
["11751673_a_at",133.05788,121.130135,122.2081,153.77026,120.52574,135.44855,0.0613575,-0.07413864,-0.06135702,0.2700796,-0.081355095,0.08704853,0.6641602,0.34989703,-1.0842047,-0.11663713,1.0842047,"down","ZMIZ2",83637,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0043596 // nuclear replication fork // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:44804012-44807583 (+) // 99.7 // p13"]
["11754663_s_at",626.4815,613.425,613.12823,699.34827,683.3266,731.8585,-0.062651634,-0.09303665,-0.09373474,0.096087456,0.062651634,0.16164112,0.07152375,0.0035215255,-1.1407119,-0.18993448,1.1407119,"down","COPS7A",50813,"0010388 // cullin deneddylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008180 // signalosome // inferred from direct assay /// 0008180 // signalosome // inferred from electronic annotation","","chr12:6833202-6841030 (+) // 99.3 // p13.31"]
["11719124_at",29.231125,41.518154,43.247448,32.965332,40.520767,46.551838,-0.48869658,0.017540455,0.076413155,-0.3152523,-0.017540455,0.18263626,0.9010799,0.7413318,-1.0581387,-0.08152878,1.0581387,"down","TIMELESS",8914,"0002009 // morphogenesis of an epithelium // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007623 // circadian rhythm // inferred from sequence or structural similarity /// 0007623 // circadian rhythm // traceable author statement /// 0009582 // detection of abiotic stimulus // traceable author statement /// 0009628 // response to abiotic stimulus // traceable author statement /// 0033261 // regulation of S phase // inferred from mutant phenotype /// 0042127 // regulation of cell proliferation // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0048511 // rhythmic process // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr12:56810157-56843191 (-) // 91.81 // q13.3"]
["11744454_a_at",507.79755,401.49005,393.8444,442.44208,369.5769,344.61816,0.3527584,0.013869286,-0.013869286,0.1539936,-0.105620384,-0.20649624,0.66060734,0.34565032,1.1252877,0.17029384,1.1252877,"up","PARD3",56288,"0006461 // protein complex assembly // traceable author statement /// 0006612 // protein targeting to membrane // inferred from sequence or structural similarity /// 0007049 // cell cycle // inferred from electronic annotation /// 0007163 // establishment or maintenance of cell polarity // traceable author statement /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // traceable author statement /// 0007409 // axonogenesis // traceable author statement /// 0008356 // asymmetric cell division // traceable author statement /// 0034329 // cell junction assembly // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0070830 // tight junction assembly // inferred from sequence or structural similarity /// 0070830 // tight junction assembly // traceable author statement /// 0090162 // establishment of epithelial cell polarity // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0005911 // cell-cell junction // inferred from sequence or structural similarity /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0005923 // tight junction // inferred from direct assay /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0005923 // tight junction // inferred from electronic annotation /// 0005923 // tight junction // traceable author statement /// 0005938 // cell cortex // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation","0005080 // protein kinase C binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from sequence or structural similarity /// 0005547 // phosphatidylinositol-3,4,5-trisphosphate binding // inferred from sequence or structural similarity /// 0008289 // lipid binding // inferred from electronic annotation /// 0032266 // phosphatidylinositol-3-phosphate binding // inferred from sequence or structural similarity","chr10:34601189-35104211 (-) // 92.45 // p11.21"]
["11746108_a_at",36.31153,39.74497,40.490414,41.611324,40.10381,40.28808,-0.14661837,-0.016273975,0.0105342865,0.049930096,-0.0033068657,0.0033068657,0.57909834,0.259376,-1.047848,-0.06742944,1.047848,"down","MPP2",4355,"0007165 // signal transduction // traceable author statement","0005624 // membrane fraction // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay","0004385 // guanylate kinase activity // traceable author statement","chr17:41953532-41977992 (-) // 97.74 // q21.31"]
["11754897_a_at",26.407784,26.147852,25.639784,26.072712,27.408966,26.931072,0.0071353912,-0.0071353912,-0.035443783,-0.011287212,0.060820103,0.035443783,0.48240724,0.17732702,-1.0282137,-0.040140193,1.0282137,"down","ACSF3",197322,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from direct assay /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0090410 // malonate catabolic process // inferred from direct assay","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016878 // acid-thiol ligase activity // inferred from direct assay /// 0090409 // malonyl-CoA synthetase activity // inferred from direct assay","chr16:89202955-89222254 (+) // 99.8 // q24.3"]
["11731440_a_at",181.22287,170.50813,176.04323,166.58096,153.2229,139.85732,0.10473299,0.01680851,0.06289768,-0.01680851,-0.13740015,-0.26907635,0.27760994,0.058437586,1.1507503,0.20257479,1.1507503,"up","IFT57",55081,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0042981 // regulation of apoptotic process // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from sequence or structural similarity /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr3:107879658-107941417 (-) // 94.57 // q13.12"]
["11718683_s_at",12.775362,10.27723,10.88627,12.282572,11.280662,12.181747,0.12407756,-0.18983507,-0.106776714,0.06732607,-0.055434704,0.055434465,0.75488514,0.4757996,-1.0569838,-0.079953305,1.0569838,"down","AFP",174,"0001542 // ovulation from ovarian follicle // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0019953 // sexual reproduction // inferred from electronic annotation /// 0031016 // pancreas development // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0042448 // progesterone metabolic process // inferred from electronic annotation /// 0060395 // SMAD protein signal transduction // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0046872 // metal ion binding // inferred from electronic annotation","chr4:74301879-74321891 (+) // 97.83 // q13.3"]
["11740271_at",12.637809,11.853192,12.553763,10.786483,11.206531,12.5634365,0.051048756,-0.041422367,0.04142213,-0.1774733,-0.12235808,0.042533398,0.54546136,0.22828875,1.0738423,0.10278212,1.0738423,"up","KIAA1383",54627,"","","","chr1:232940637-232946092 (+) // 94.45 // q42.2"]
["11743659_a_at",46.552933,44.17276,40.407726,46.646267,41.093517,40.407726,0.12783813,0.05212307,-0.076402664,0.13072777,-0.05212307,-0.076402664,0.89182734,0.72197396,1.0236946,0.033785425,1.0236946,"up","SNRNP27",11017,"0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // non-traceable author statement","chr2:70120691-70132348 (+) // 76.16 // p13.3"]
["11738627_a_at",31.950804,29.603811,26.29921,32.610703,30.704937,34.439762,0.028690815,-0.08137846,-0.25214195,0.058184147,-0.028690815,0.13691378,0.47531098,0.17239796,-1.1150272,-0.15707889,1.1150272,"down","ARHGAP6",395,"0007015 // actin filament organization // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007202 // activation of phospholipase C activity // inferred from direct assay /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // non-traceable author statement /// 0007266 // Rho protein signal transduction // traceable author statement /// 0010518 // positive regulation of phospholipase activity // inferred from direct assay /// 0030041 // actin filament polymerization // non-traceable author statement /// 0032321 // positive regulation of Rho GTPase activity // inferred from sequence or structural similarity /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0043087 // regulation of GTPase activity // inferred from sequence or structural similarity /// 0043087 // regulation of GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0048041 // focal adhesion assembly // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051497 // negative regulation of stress fiber assembly // inferred from mutant phenotype /// 0051895 // negative regulation of focal adhesion assembly // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from mutant phenotype /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005884 // actin filament // non-traceable author statement /// 0015629 // actin cytoskeleton // inferred from sequence or structural similarity /// 0015629 // actin cytoskeleton // inferred from electronic annotation","0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // inferred from sequence or structural similarity /// 0005100 // Rho GTPase activator activity // inferred from electronic annotation /// 0016004 // phospholipase activator activity // inferred from direct assay /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0043274 // phospholipase binding // inferred from physical interaction","chrX:11161516-11683821 (-) // 97.28 // p22.2"]
["11760539_a_at",8.035541,11.038026,7.4503756,7.4435363,6.8822136,7.616417,0.093182325,0.5511975,-0.01589942,-0.01722455,-0.1303401,0.015899658,0.5479861,0.2304437,1.191998,0.25338182,1.191998,"up","IBTK",25998,"0001933 // negative regulation of protein phosphorylation // inferred from direct assay /// 0051209 // release of sequestered calcium ion into cytosol // inferred from direct assay /// 0061099 // negative regulation of protein tyrosine kinase activity // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0019901 // protein kinase binding // inferred from direct assay /// 0030292 // protein tyrosine kinase inhibitor activity // inferred from direct assay","chr6:82901047-82957471 (-) // 100.0 // q14.1"]
["11715669_s_at",410.39737,262.57275,244.7368,360.75748,223.44342,221.33717,0.6950474,0.050743103,-0.050742626,0.50905514,-0.18206453,-0.1957283,0.8302067,0.59912616,1.1391269,0.18792847,1.1391269,"up","DCTN1",1639,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007067 // mitosis // non-traceable author statement /// 0007399 // nervous system development // non-traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement","0000776 // kinetochore // inferred from direct assay /// 0000922 // spindle pole // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005868 // cytoplasmic dynein complex // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation /// 0030286 // dynein complex // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from electronic annotation","0003774 // motor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr2:74588284-74607482 (-) // 92.76 // p13.1"]
["11726170_at",43.095028,55.338757,51.485043,49.83631,50.538795,55.027546,-0.24325085,0.11751795,0.013381004,-0.033575058,-0.013381004,0.109381676,0.8529782,0.6422678,-1.0412086,-0.058259167,1.0412086,"down","FLT4",2324,"0001525 // angiogenesis // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from mutant phenotype /// 0001938 // positive regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001944 // vasculature development // inferred from sequence or structural similarity /// 0001944 // vasculature development // inferred from electronic annotation /// 0001945 // lymph vessel development // inferred from sequence or structural similarity /// 0001945 // lymph vessel development // inferred from electronic annotation /// 0001946 // lymphangiogenesis // inferred from mutant phenotype /// 0001946 // lymphangiogenesis // inferred from sequence or structural similarity /// 0001946 // lymphangiogenesis // inferred from electronic annotation /// 0002040 // sprouting angiogenesis // inferred from sequence or structural similarity /// 0002040 // sprouting angiogenesis // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from mutant phenotype /// 0010595 // positive regulation of endothelial cell migration // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0030307 // positive regulation of cell growth // inferred from electronic annotation /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from direct assay /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from mutant phenotype /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from direct assay /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from mutant phenotype /// 0038084 // vascular endothelial growth factor signaling pathway // traceable author statement /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043410 // positive regulation of MAPK cascade // inferred from mutant phenotype /// 0046330 // positive regulation of JNK cascade // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from direct assay /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from genetic interaction /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from mutant phenotype /// 0048010 // vascular endothelial growth factor receptor signaling pathway // traceable author statement /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from electronic annotation /// 0048514 // blood vessel morphogenesis // inferred from sequence or structural similarity /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0060312 // regulation of blood vessel remodeling // inferred from sequence or structural similarity /// 0060312 // regulation of blood vessel remodeling // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from mutant phenotype /// 0090037 // positive regulation of protein kinase C signaling cascade // inferred from mutant phenotype","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from mutant phenotype /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from direct assay /// 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from mutant phenotype /// 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from electronic annotation /// 0005021 // vascular endothelial growth factor-activated receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from physical interaction /// 0019838 // growth factor binding // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from physical interaction","chr5:180028505-180076678 (-) // 99.74 // q35.3"]
["11752178_a_at",14.556154,16.863832,16.997086,16.468975,15.999773,15.231484,-0.15727186,0.0550313,0.06638622,0.020849705,-0.020849943,-0.09184456,0.93706894,0.8266202,1.0130206,0.018663561,1.0130206,"up","SEMA4D",10507,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0006916 // anti-apoptosis // traceable author statement /// 0006955 // immune response // traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0008360 // regulation of cell shape // inferred from mutant phenotype /// 0010693 // negative regulation of alkaline phosphatase activity // inferred from mutant phenotype /// 0010693 // negative regulation of alkaline phosphatase activity // inferred from electronic annotation /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // inferred from mutant phenotype /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from sequence or structural similarity /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031344 // regulation of cell projection organization // inferred from mutant phenotype /// 0032321 // positive regulation of Rho GTPase activity // inferred from mutant phenotype /// 0032321 // positive regulation of Rho GTPase activity // inferred from sequence or structural similarity /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0043931 // ossification involved in bone maturation // inferred from mutant phenotype /// 0043931 // ossification involved in bone maturation // inferred from electronic annotation /// 0045668 // negative regulation of osteoblast differentiation // inferred from sequence or structural similarity /// 0045668 // negative regulation of osteoblast differentiation // inferred from electronic annotation /// 0048672 // positive regulation of collateral sprouting // inferred from mutant phenotype /// 0048814 // regulation of dendrite morphogenesis // inferred from mutant phenotype /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from sequence or structural similarity /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050732 // negative regulation of peptidyl-tyrosine phosphorylation // inferred from sequence or structural similarity /// 0050732 // negative regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050772 // positive regulation of axonogenesis // inferred from electronic annotation /// 0061383 // trabecula morphogenesis // inferred from sequence or structural similarity /// 0061383 // trabecula morphogenesis // inferred from electronic annotation /// 0070486 // leukocyte aggregation // inferred from mutant phenotype /// 0071526 // semaphorin-plexin signaling pathway // inferred from mutant phenotype","0005615 // extracellular space // inferred from sequence or structural similarity /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from mutant phenotype /// 0005102 // receptor binding // inferred from direct assay /// 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030215 // semaphorin receptor binding // inferred from sequence or structural similarity /// 0030215 // semaphorin receptor binding // inferred from electronic annotation","chr9:91977153-92070868 (-) // 88.04 // q22.2"]
["11742535_x_at",92.695274,99.46339,123.85497,90.1049,101.154526,114.86655,-0.11383152,-0.012161732,0.30425262,-0.15472174,0.012161255,0.1955595,0.929084,0.8087423,1.0293641,0.041753385,1.0293641,"up","FAM58BP",339521,"0000079 // regulation of cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","","0019901 // protein kinase binding // inferred from electronic annotation","chr1:200182655-200183643 (+) // 94.74 // q32.1"]
["11723101_a_at",240.9559,224.19495,206.35716,253.97104,253.82225,216.92696,0.052007675,-0.052007675,-0.17161798,0.12790298,0.12705755,-0.09955263,0.65101886,0.33482832,-1.0784869,-0.10900868,1.0784869,"down","DDX10",1662,"","","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003724 // RNA helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr11:108535803-108811654 (+) // 96.83 // q22.3"]
["11721897_a_at",20.433105,26.709219,23.951834,23.181984,22.506659,21.944864,-0.16076946,0.22565985,0.06845808,0.021326065,-0.021326065,-0.05779457,0.8339043,0.6075663,1.0451531,0.06371435,1.0451531,"up","DHX58",79132,"0009615 // response to virus // inferred from sequence or structural similarity /// 0009615 // response to virus // inferred from electronic annotation /// 0032480 // negative regulation of type I interferon production // inferred from direct assay /// 0032481 // positive regulation of type I interferon production // inferred from sequence or structural similarity /// 0039534 // negative regulation of MDA-5 signaling pathway // inferred from mutant phenotype /// 0039536 // negative regulation of RIG-I signaling pathway // inferred from direct assay /// 0039536 // negative regulation of RIG-I signaling pathway // inferred from mutant phenotype /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation /// 0045088 // regulation of innate immune response // inferred from direct assay /// 0045824 // negative regulation of innate immune response // inferred from direct assay /// 1900245 // positive regulation of MDA-5 signaling pathway // inferred from sequence or structural similarity /// 1900246 // positive regulation of RIG-I signaling pathway // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0003727 // single-stranded RNA binding // inferred from direct assay /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016817 // hydrolase activity, acting on acid anhydrides // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:40253421-40264751 (-) // 96.64 // q21.2"]
["11753099_a_at",75.6495,67.73786,63.642605,58.508873,60.096367,65.42103,0.2294569,0.07008886,-0.019880772,-0.14121819,-0.10259628,0.019880772,0.41131932,0.1277967,1.1233957,0.16786616,1.1233957,"up","SORBS3",10174,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0031589 // cell-substrate adhesion // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0051495 // positive regulation of cytoskeleton organization // non-traceable author statement /// 0051496 // positive regulation of stress fiber assembly // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0017166 // vinculin binding // inferred from physical interaction","chr8:22409439-22424207 (+) // 99.92 // p21.3"]
["11757127_at",20.589022,25.693966,34.387474,24.839512,27.799704,27.987926,-0.37637424,-0.056819916,0.36363363,-0.105612755,0.056819916,0.06655502,0.9649277,0.90176743,-1.0203807,-0.029107567,1.0203807,"down","SNORA23",677808,"","","","chr11:9450312-9450501 (+) // 99.47 // p15.4"]
["11737769_a_at",457.82657,453.3166,429.34076,582.99005,565.3145,639.29425,-0.15212631,-0.16640854,-0.24480438,0.1965437,0.15212631,0.32955265,0.060326383,0.002403024,-1.33224,-0.41385397,1.33224,"down","MYO1C",4641,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation","0001725 // stress fiber // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005902 // microvillus // inferred from direct assay /// 0005903 // brush border // inferred from electronic annotation /// 0009925 // basal plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016328 // lateral plasma membrane // inferred from direct assay /// 0016459 // myosin complex // inferred from electronic annotation /// 0016461 // unconventional myosin complex // traceable author statement /// 0031941 // filamentous actin // inferred from direct assay /// 0032420 // stereocilium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045160 // myosin I complex // inferred from electronic annotation /// 0060171 // stereocilium membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from electronic annotation","chr17:1367481-1389495 (-) // 87.7 // p13.3"]
["11725994_a_at",104.340805,92.89524,92.40348,115.92497,102.83937,103.10627,0.019041061,-0.14858627,-0.15624332,0.17092896,-0.0018696785,0.0018696785,0.41893438,0.13242409,-1.111293,-0.15223919,1.111293,"down","MRPL11",65003,"0006412 // translation // non-traceable author statement /// 0006412 // translation // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005761 // mitochondrial ribosome // non-traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation","chr11:66202549-66206299 (-) // 84.49 // q13.2"]
["11734788_at",6.7198734,7.352891,7.5323386,6.9154773,6.681866,7.49758,-0.08563614,0.04424143,0.07902765,-0.04424143,-0.09381914,0.07235479,0.8565763,0.6496246,1.0241636,0.034446195,1.0241636,"up","OLFM3",118427,"0042462 // eye photoreceptor cell development // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation","","chr1:102268126-102462790 (-) // 96.6 // p21.1"]
["11734033_at",188.80858,200.47974,190.37592,224.71024,201.23961,205.53549,-0.089261055,-0.002728939,-0.077334404,0.1618805,0.002728939,0.03320217,0.35126287,0.0932932,-1.0885282,-0.12237872,1.0885282,"down","C15orf61",145853,"","0005576 // extracellular region // inferred from electronic annotation","","chr15:67813405-67819735 (+) // 100.0 // q23"]
["11722956_at",166.4864,161.29337,147.93463,127.120735,140.95808,167.29472,0.10808039,0.062363625,-0.062363625,-0.2811246,-0.13205719,0.115068436,0.658938,0.34394976,1.0983957,0.13539788,1.0983957,"up","GLTPD2",388323,"0046836 // glycolipid transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0017089 // glycolipid transporter activity // inferred from electronic annotation /// 0051861 // glycolipid binding // inferred from electronic annotation","chr17:4692253-4693685 (+) // 99.61 // p13.2"]
["11744500_a_at",479.98898,436.53275,429.28058,448.6348,437.0756,410.75998,0.13601494,-0.00089645386,-0.025065422,0.038555145,0.00089645386,-0.08869076,0.73507506,0.4452119,1.03749,0.053097446,1.03749,"up","ASXL1",171023,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from sequence or structural similarity /// 0035359 // negative regulation of peroxisome proliferator activated receptor signaling pathway // inferred from sequence or structural similarity /// 0035522 // monoubiquitinated histone H2A deubiquitination // inferred from direct assay /// 0045599 // negative regulation of fat cell differentiation // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0048386 // positive regulation of retinoic acid receptor signaling pathway // inferred from sequence or structural similarity /// 0048387 // negative regulation of retinoic acid receptor signaling pathway // inferred from sequence or structural similarity","0000790 // nuclear chromatin // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0035517 // PR-DUB complex // inferred from direct assay","0003713 // transcription coactivator activity // inferred from sequence or structural similarity /// 0003714 // transcription corepressor activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0042974 // retinoic acid receptor binding // inferred from sequence or structural similarity /// 0042975 // peroxisome proliferator activated receptor binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:30947549-31027121 (+) // 99.97 // q11.21"]
["11763440_at",62.044163,76.71914,77.04852,71.28413,81.397705,81.184105,-0.30938148,-0.0030899048,0.0030903816,-0.10909557,0.08231211,0.078520775,0.6837556,0.375973,-1.0870157,-0.12037284,1.0870157,"down","MLPH",79083,"0006605 // protein targeting // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0030318 // melanocyte differentiation // inferred from electronic annotation /// 0032400 // melanosome localization // inferred from electronic annotation /// 0043473 // pigmentation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0017022 // myosin binding // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0031489 // myosin V binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051010 // microtubule plus-end binding // inferred from electronic annotation","chr2:238457795-238460620 (+) // 73.7 // q37.3"]
["11761552_at",59.148026,59.49194,64.251755,93.629616,74.14892,66.03964,-0.13920403,-0.13083982,-0.019798279,0.5234308,0.18689156,0.019798279,0.346385,0.09042873,-1.2657458,-0.33998764,1.2657458,"down","C15orf29",79768,"","0005730 // nucleolus // inferred from direct assay","","chr15:34440436-34502262 (-) // 76.25 // q14"]
["11744354_a_at",121.98022,103.490265,100.93214,115.44671,106.1563,111.8209,0.16295719,-0.07419491,-0.110304356,0.083536625,-0.037499905,0.037499905,0.89321876,0.7246835,-1.0245755,-0.03502626,1.0245755,"down","TATDN2",9797,"0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0004518 // nuclease activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016888 // endodeoxyribonuclease activity, producing 5'-phosphomonoesters // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:10290218-10323014 (+) // 99.07 // p25.3"]
["11741030_a_at",110.48359,102.95865,121.7151,134.06175,142.69064,109.23933,-0.06983805,-0.17160511,0.06983805,0.20922756,0.29922056,-0.086177826,0.5344606,0.21871822,-1.147074,-0.19795844,1.147074,"down","PTCD2",79810,"0001822 // kidney development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0007005 // mitochondrion organization // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0048747 // muscle fiber development // inferred from electronic annotation /// 0050684 // regulation of mRNA processing // inferred from electronic annotation /// 0055010 // ventricular cardiac muscle tissue morphogenesis // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation","","chr5:71616199-71655180 (+) // 99.9 // q13.2"]
["11721240_at",136.93059,135.42667,127.89491,155.84782,142.47197,138.56769,-0.008573055,-0.024506092,-0.107058525,0.17812014,0.0486598,0.008573055,0.3699467,0.103535645,-1.0906314,-0.12516356,1.0906314,"down","ZNF787",126208,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:56598731-56632678 (-) // 86.34 // q13.43"]
["11718047_a_at",223.39491,215.76462,223.3828,246.66794,223.47112,229.43192,-0.00024604797,-0.050384045,-0.00032424927,0.14272833,0.00024604797,0.038223743,0.46741837,0.16605012,-1.0551032,-0.07738409,1.0551032,"down","ITPK1",3705,"0007165 // signal transduction // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032957 // inositol trisphosphate metabolic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003824 // catalytic activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047325 // inositol tetrakisphosphate 1-kinase activity // inferred from electronic annotation /// 0052725 // inositol-1,3,4-trisphosphate 6-kinase activity // inferred from electronic annotation /// 0052726 // inositol-1,3,4-trisphosphate 5-kinase activity // inferred from electronic annotation","chr14:93403258-93582263 (-) // 91.79 // q32.12"]
["11720597_s_at",164.14143,125.88958,136.7688,137.22989,110.16875,114.06023,0.32299042,-0.059790134,0.059790134,0.06464577,-0.25223446,-0.2021532,0.496384,0.1880521,1.1790112,0.23757745,1.1790112,"up","CSRNP2",81566,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0010923 // negative regulation of phosphatase activity // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019902 // phosphatase binding // inferred from direct assay","chr12:51454989-51477377 (-) // 97.08 // q13.12"]
["11717857_a_at",438.26382,404.33054,417.59793,437.14175,414.88934,407.6533,0.07437897,-0.041885376,0.004693985,0.07068062,-0.004693985,-0.030077934,0.9974226,0.99295026,1.0002955,0.000426282,1.0002955,"up","DHX29",54505,"0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr5:54551890-54603521 (-) // 96.85 // q11.2"]
["11723794_a_at",179.87418,197.34128,192.69873,173.30307,207.22305,210.87683,-0.116532326,0.017172813,-0.017172813,-0.17022324,0.08766413,0.11288023,0.8553208,0.6467279,-1.0345125,-0.048951104,1.0345125,"down","SLC29A2",3177,"0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0015853 // adenine transport // inferred from electronic annotation /// 0015854 // guanine transport // inferred from electronic annotation /// 0015858 // nucleoside transport // inferred from direct assay /// 0015858 // nucleoside transport // inferred from electronic annotation /// 0015858 // nucleoside transport // traceable author statement /// 0015862 // uridine transport // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0035344 // hypoxanthine transport // inferred from electronic annotation /// 0035364 // thymine transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","0005337 // nucleoside transmembrane transporter activity // inferred from electronic annotation /// 0005337 // nucleoside transmembrane transporter activity // traceable author statement","chr11:66129558-66139961 (-) // 85.71 // q13.2"]
["11744478_s_at",12.6735115,10.67128,12.665397,15.758222,15.583313,10.410232,0.0004620552,-0.24762106,-0.0004620552,0.3147502,0.29864764,-0.28335214,0.71520114,0.4178124,-1.1427863,-0.19255559,1.1427863,"down","HBG1 /// HBG2 /// LOC100653006 /// LOC100653319","100653006 /// 100653319 /// 3047 /// 3048","0002026 // regulation of the force of heart contraction // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0007517 // muscle organ development // non-traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0015671 // oxygen transport // inferred from electronic annotation /// 0030049 // muscle filament sliding // traceable author statement /// 0032781 // positive regulation of ATPase activity // inferred from mutant phenotype /// 0060048 // cardiac muscle contraction // inferred from mutant phenotype","0005829 // cytosol // traceable author statement /// 0005833 // hemoglobin complex // inferred from electronic annotation /// 0005859 // muscle myosin complex // non-traceable author statement /// 0016459 // myosin complex // inferred from electronic annotation /// 0031672 // A band // inferred from mutant phenotype","0003785 // actin monomer binding // inferred from direct assay /// 0005344 // oxygen transporter activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008307 // structural constituent of muscle // non-traceable author statement /// 0019825 // oxygen binding // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0032038 // myosin II heavy chain binding // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from mutant phenotype","chr11:5274421-5276011 (-) // 89.95 // p15.4"]
["11751574_a_at",137.8896,144.54372,148.29405,132.76294,174.67418,166.69354,-0.0864687,-0.01847744,0.01847744,-0.14113045,0.2546835,0.18721533,0.6747527,0.36373687,-1.0935954,-0.12907906,1.0935954,"down","TMEM119",338773,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:108985051-108991833 (-) // 97.52 // q23.3"]
["11758986_at",33.74826,42.61986,40.21637,37.577152,38.39552,43.01228,-0.21954727,0.117165565,0.03342247,-0.06450462,-0.03342247,0.13038826,0.92058146,0.78853285,-1.0237098,-0.033806764,1.0237098,"down","ZNF48",197407,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:30406770-30411429 (+) // 90.37 // p11.2"]
["11759807_a_at",10.628391,10.150525,11.257447,8.51706,9.887474,8.834409,0.08530903,0.01894021,0.16826558,-0.23418641,-0.018939972,-0.1814084,0.22574209,0.038882755,1.1774642,0.23568325,1.1774642,"up","TXLNG2P",246126,"","","","chrY:21729672-21751733 (+) // 84.18 // q11.222"]
["11722339_a_at",16.152945,14.858889,14.360036,14.248394,16.363005,13.8948765,0.14510465,0.024633408,-0.024633408,-0.03589344,0.16374516,-0.0721395,0.90729356,0.75458133,1.0208688,0.029797435,1.0208688,"up","DIAPH2",1730,"0000910 // cytokinesis // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007292 // female gamete generation // traceable author statement /// 0016043 // cellular component organization // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030041 // actin filament polymerization // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0048477 // oogenesis // inferred from electronic annotation","0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003779 // actin binding // inferred from electronic annotation /// 0005102 // receptor binding // traceable author statement /// 0017048 // Rho GTPase binding // inferred from electronic annotation","chrX:95939661-96724837 (+) // 99.5 // q21.33"]
["11726523_s_at",643.00867,563.8795,502.209,614.52893,521.06555,471.3978,0.24641228,0.05696106,-0.11013794,0.18105507,-0.05696106,-0.20148087,0.8215648,0.58433884,1.0645232,0.09020742,1.0645232,"up","ZFHX3",463,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007517 // muscle organ development // inferred from electronic annotation /// 0045662 // negative regulation of myoblast differentiation // inferred from direct assay /// 0045663 // positive regulation of myoblast differentiation // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:72816787-73082274 (-) // 95.7 // q22.2"]
["11728566_x_at",129.43532,116.45582,119.49397,133.71535,125.541466,114.02483,0.079679966,-0.07276821,-0.03561306,0.1266141,0.035612583,-0.10320282,0.8983779,0.7365444,-1.0204756,-0.029241724,1.0204756,"down","FAM210A",125228,"","0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr18:13663345-13726591 (-) // 82.65 // p11.21"]
["11746202_x_at",69.05624,85.320366,72.888306,70.6787,70.40564,65.00527,-0.030712128,0.27440643,0.047204018,0.0027923584,-0.0027923584,-0.1179266,0.5622266,0.24315606,1.0990636,0.13627492,1.0990636,"up","NAB1",4664,"0001958 // endochondral ossification // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0014037 // Schwann cell differentiation // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation /// 0045682 // regulation of epidermis development // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // non-traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0008134 // transcription factor binding // inferred from electronic annotation","chr2:191513759-191555999 (+) // 95.63 // q32.2"]
["11754138_s_at",1492.7595,1383.2036,1387.4747,1371.8739,1409.5729,1302.8523,0.10774422,-0.0022239685,0.0022239685,-0.014089584,0.0250206,-0.08856392,0.5961851,0.27585405,1.0437617,0.06179241,1.0437617,"up","PSPH",5723,"0006563 // L-serine metabolic process // inferred from direct assay /// 0006563 // L-serine metabolic process // traceable author statement /// 0006564 // L-serine biosynthetic process // not recorded /// 0006564 // L-serine biosynthetic process // traceable author statement /// 0006564 // L-serine biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // traceable author statement /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0033574 // response to testosterone stimulus // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005737 // cytoplasm // not recorded /// 0005829 // cytosol // traceable author statement /// 0019717 // synaptosome // inferred from electronic annotation","0000287 // magnesium ion binding // inferred from direct assay /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004647 // phosphoserine phosphatase activity // inferred from direct assay /// 0004647 // phosphoserine phosphatase activity // traceable author statement /// 0004647 // phosphoserine phosphatase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:56079260-56088925 (-) // 49.3 // p11.2"]
["11722719_s_at",369.4062,400.20786,402.18307,372.75668,397.81818,423.3889,-0.11122131,0.0043201447,0.011423111,-0.098195076,-0.0043201447,0.08555412,0.887512,0.71312183,-1.0183069,-0.02617236,1.0183069,"down","BAIAP2",10458,"0007165 // signal transduction // inferred from electronic annotation /// 0007409 // axonogenesis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0009617 // response to bacterium // inferred from mutant phenotype /// 0016358 // dendrite development // inferred from electronic annotation /// 0032956 // regulation of actin cytoskeleton organization // inferred from mutant phenotype /// 0046847 // filopodium assembly // inferred from electronic annotation /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0051017 // actin filament bundle assembly // inferred from electronic annotation","0001726 // ruffle // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0030175 // filopodium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // traceable author statement /// 0008093 // cytoskeletal adaptor activity // inferred from electronic annotation /// 0008093 // cytoskeletal adaptor activity // traceable author statement /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0070064 // proline-rich region binding // inferred from direct assay","chr17:79008946-79084378 (+) // 98.74 // q25.3"]
["11763392_at",23.15685,25.889135,24.101198,27.670788,24.728752,21.07184,-0.076208115,0.08469963,-0.01854229,0.18071651,0.01854229,-0.21233082,0.997648,0.99387777,1.0006983,0.0010071228,1.0006983,"up","LOC100132005",100132005,"","","","chr6:38147073-38149010 (+) // 99.64 // p21.2"]
["11763882_at",22.222084,21.490828,22.193129,20.80701,21.70443,25.279398,0.017942905,-0.030330181,0.016061783,-0.076981544,-0.016061783,0.20391083,0.88240206,0.7015658,-1.025076,-0.03573092,1.025076,"down","","","","","","chr9:128506035-128508208 (-) // 97.61 // q33.3"]
["11727631_s_at",82.61058,90.43641,89.537834,73.41213,78.51815,96.59642,-0.05808544,0.072491646,0.05808544,-0.22839355,-0.1313858,0.16755772,0.78567773,0.5227035,1.0630709,0.08823781,1.0630709,"up","APBA2",321,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation","0001540 // beta-amyloid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr15:29131174-29410518 (+) // 97.63 // q13.1"]
["11722485_a_at",247.81526,231.25705,234.41328,242.55623,234.88948,234.15558,0.078746796,-0.021020412,-0.0014638901,0.04780054,0.0014638901,-0.003051281,0.97444713,0.9274873,1.0023246,0.0033497699,1.0023246,"up","UTP14C",9724,"0006364 // rRNA processing // inferred from electronic annotation /// 0007126 // meiosis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0032040 // small-subunit processome // inferred from electronic annotation","","chr13:52586522-52607790 (+) // 88.83 // q14.3"]
["11724880_s_at",48.75424,50.061592,44.50373,53.637234,49.759315,47.316875,-0.014719486,0.02345705,-0.14632082,0.12298775,0.014719486,-0.057892323,0.6868267,0.38014284,-1.0515125,-0.07246597,1.0515125,"down","ZNF217",7764,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0000118 // histone deacetylase complex // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:52183609-52199636 (-) // 99.06 // q13.2"]
["11738336_at",19.307245,23.464197,21.422285,18.851957,22.135168,22.20522,-0.17358398,0.10773468,-0.02361393,-0.2080121,0.02361393,0.028172493,0.94757855,0.85300297,1.015545,0.022254184,1.015545,"up","C7orf65",401335,"","","","chr7:47694841-47701246 (+) // 87.67 // p12.3"]
["11715348_x_at",171.91469,180.58167,156.3472,165.70422,175.38963,192.69371,-0.014435291,0.056523323,-0.15137482,-0.067518234,0.014435291,0.15018082,0.756839,0.47826645,-1.0488402,-0.06879484,1.0488402,"down","HBB",3043,"0006810 // transport // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0010942 // positive regulation of cell death // inferred from direct assay /// 0015671 // oxygen transport // non-traceable author statement /// 0015671 // oxygen transport // traceable author statement /// 0015671 // oxygen transport // inferred from electronic annotation /// 0030185 // nitric oxide transport // non-traceable author statement /// 0042542 // response to hydrogen peroxide // inferred from direct assay /// 0042744 // hydrogen peroxide catabolic process // inferred from direct assay /// 0045429 // positive regulation of nitric oxide biosynthetic process // non-traceable author statement /// 0050880 // regulation of blood vessel size // inferred from electronic annotation /// 0051291 // protein heterooligomerization // inferred from direct assay /// 0070293 // renal absorption // inferred from mutant phenotype","0005829 // cytosol // traceable author statement /// 0005833 // hemoglobin complex // inferred from direct assay /// 0005833 // hemoglobin complex // non-traceable author statement /// 0005833 // hemoglobin complex // traceable author statement /// 0005833 // hemoglobin complex // inferred from electronic annotation /// 0031838 // haptoglobin-hemoglobin complex // inferred from direct assay","0004601 // peroxidase activity // inferred from direct assay /// 0005344 // oxygen transporter activity // non-traceable author statement /// 0005344 // oxygen transporter activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019825 // oxygen binding // inferred from direct assay /// 0019825 // oxygen binding // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0030492 // hemoglobin binding // inferred from direct assay /// 0031720 // haptoglobin binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:5246694-5248427 (-) // 79.06 // p15.4"]
["11739841_a_at",107.24324,102.38951,101.199005,99.58529,92.904915,93.41966,0.095286846,0.028468132,0.011595249,-0.011595249,-0.111773014,-0.10380173,0.23610765,0.04227902,1.0873679,0.12084013,1.0873679,"up","BCL6",604,"0000060 // protein import into nucleus, translocation // inferred from genetic interaction /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001953 // negative regulation of cell-matrix adhesion // inferred from electronic annotation /// 0002467 // germinal center formation // inferred from electronic annotation /// 0002634 // regulation of germinal center formation // non-traceable author statement /// 0002829 // negative regulation of type 2 immune response // inferred from electronic annotation /// 0002903 // negative regulation of B cell apoptotic process // non-traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0007266 // Rho protein signal transduction // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008104 // protein localization // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030183 // B cell differentiation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0030890 // positive regulation of B cell proliferation // inferred from electronic annotation /// 0032319 // regulation of Rho GTPase activity // inferred from electronic annotation /// 0032764 // negative regulation of mast cell cytokine production // inferred from electronic annotation /// 0035024 // negative regulation of Rho protein signal transduction // inferred from electronic annotation /// 0042092 // type 2 immune response // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043380 // regulation of memory T cell differentiation // inferred from electronic annotation /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045629 // negative regulation of T-helper 2 cell differentiation // inferred from electronic annotation /// 0045749 // negative regulation of S phase of mitotic cell cycle // non-traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // non-traceable author statement /// 0048294 // negative regulation of isotype switching to IgE isotypes // inferred from electronic annotation /// 0048821 // erythrocyte development // inferred from electronic annotation /// 0050727 // regulation of inflammatory response // inferred from electronic annotation /// 0050776 // regulation of immune response // non-traceable author statement /// 0051272 // positive regulation of cellular component movement // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005657 // replication fork // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0031490 // chromatin DNA binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:187439164-187459050 (-) // 96.21 // q27.3"]
["11750146_a_at",23.897247,20.144999,21.939817,19.963623,19.783867,19.096182,0.25294685,0.006524086,0.12965393,-0.006524086,-0.019573212,-0.070613384,0.35104856,0.09315751,1.1187946,0.16194515,1.1187946,"up","TKTL1",8277,"0006007 // glucose catabolic process // traceable author statement /// 0006772 // thiamine metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004802 // transketolase activity // inferred from electronic annotation /// 0004802 // transketolase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:153524123-153558282 (+) // 99.75 // q28"]
["11715895_at",82.82673,76.11079,76.87578,131.22972,93.93391,82.61626,0.0018353462,-0.1201601,-0.105731964,0.6657615,0.1833849,-0.0018353462,0.4491428,0.15284133,-1.2808686,-0.35712254,1.2808686,"down","SCARB2",950,"0006622 // protein targeting to lysosome // inferred from mutant phenotype /// 0006622 // protein targeting to lysosome // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from sequence or structural similarity /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043202 // lysosomal lumen // inferred from sequence or structural similarity /// 0043202 // lysosomal lumen // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from electronic annotation","chr4:77079889-77135039 (-) // 89.53 // q21.1"]
["11750080_a_at",925.36456,800.5792,824.4822,1138.321,1028.1443,1040.2458,-0.075974464,-0.28495216,-0.24250793,0.22283936,0.075974464,0.09285641,0.13441831,0.013630961,-1.2584969,-0.33170164,1.2584969,"down","DDB2",1643,"0000209 // protein polyubiquitination // inferred from direct assay /// 0000718 // nucleotide-excision repair, DNA damage removal // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006290 // pyrimidine dimer repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0009411 // response to UV // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0051865 // protein autoubiquitination // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0043234 // protein complex // inferred from direct assay","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // traceable author statement /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr11:47236644-47260400 (+) // 99.09 // p11.2"]
["11737213_at",24.363636,20.454782,17.426224,17.064898,19.849337,18.495394,0.346601,0.09430981,-0.13686848,-0.16709661,0.050962448,-0.050962448,0.6742601,0.36315447,1.115002,0.15704635,1.115002,"up","C12orf61",283416,"","","","chr12:62995530-62997470 (-) // 89.38 // q14.1"]
["11748483_a_at",9.327254,11.749792,12.23898,11.817292,10.374478,9.95575,-0.2433126,0.08979821,0.1486466,0.098062515,-0.08979821,-0.14923501,0.91197515,0.76690567,1.0319461,0.045367565,1.0319461,"up","P2RX7",5027,"0000187 // activation of MAPK activity // inferred from electronic annotation /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001845 // phagolysosome assembly // inferred from electronic annotation /// 0001916 // positive regulation of T cell mediated cytotoxicity // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0002028 // regulation of sodium ion transport // inferred from sequence or structural similarity /// 0002028 // regulation of sodium ion transport // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006509 // membrane protein ectodomain proteolysis // inferred from electronic annotation /// 0006649 // phospholipid transfer to membrane // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006884 // cell volume homeostasis // inferred from electronic annotation /// 0006900 // membrane budding // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007005 // mitochondrion organization // inferred from electronic annotation /// 0007009 // plasma membrane organization // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from sequence or structural similarity /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009617 // response to bacterium // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0010043 // response to zinc ion // inferred from electronic annotation /// 0010467 // gene expression // inferred from electronic annotation /// 0010524 // positive regulation of calcium ion transport into cytosol // inferred from direct assay /// 0014049 // positive regulation of glutamate secretion // inferred from electronic annotation /// 0014054 // positive regulation of gamma-aminobutyric acid secretion // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016079 // synaptic vesicle exocytosis // inferred from electronic annotation /// 0016485 // protein processing // inferred from electronic annotation /// 0019228 // regulation of action potential in neuron // inferred from electronic annotation /// 0019233 // sensory perception of pain // inferred from sequence or structural similarity /// 0019233 // sensory perception of pain // inferred from electronic annotation /// 0019835 // cytolysis // inferred from electronic annotation /// 0030501 // positive regulation of bone mineralization // inferred from sequence or structural similarity /// 0030501 // positive regulation of bone mineralization // inferred from electronic annotation /// 0031668 // cellular response to extracellular stimulus // inferred from electronic annotation /// 0032060 // bleb assembly // inferred from sequence or structural similarity /// 0032060 // bleb assembly // inferred from electronic annotation /// 0032308 // positive regulation of prostaglandin secretion // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032731 // positive regulation of interleukin-1 beta production // inferred from electronic annotation /// 0032755 // positive regulation of interleukin-6 production // inferred from electronic annotation /// 0032963 // collagen metabolic process // inferred from electronic annotation /// 0033198 // response to ATP // inferred from direct assay /// 0033198 // response to ATP // inferred from electronic annotation /// 0034405 // response to fluid shear stress // inferred from electronic annotation /// 0035590 // purinergic nucleotide receptor signaling pathway // inferred from direct assay /// 0035590 // purinergic nucleotide receptor signaling pathway // inferred from electronic annotation /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0042098 // T cell proliferation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from sequence or structural similarity /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043029 // T cell homeostasis // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // inferred from electronic annotation /// 0043132 // NAD transport // inferred from electronic annotation /// 0043409 // negative regulation of MAPK cascade // inferred from sequence or structural similarity /// 0043409 // negative regulation of MAPK cascade // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0044254 // multicellular organismal protein catabolic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045332 // phospholipid translocation // inferred from electronic annotation /// 0045778 // positive regulation of ossification // inferred from electronic annotation /// 0045779 // negative regulation of bone resorption // inferred from sequence or structural similarity /// 0045779 // negative regulation of bone resorption // inferred from electronic annotation /// 0045919 // positive regulation of cytolysis // inferred from sequence or structural similarity /// 0045919 // positive regulation of cytolysis // inferred from electronic annotation /// 0046513 // ceramide biosynthetic process // inferred from electronic annotation /// 0046931 // pore complex assembly // inferred from direct assay /// 0046931 // pore complex assembly // inferred from electronic annotation /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0048873 // homeostasis of number of cells within a tissue // inferred from electronic annotation /// 0050714 // positive regulation of protein secretion // inferred from electronic annotation /// 0050715 // positive regulation of cytokine secretion // inferred from electronic annotation /// 0050717 // positive regulation of interleukin-1 alpha secretion // inferred from electronic annotation /// 0050718 // positive regulation of interleukin-1 beta secretion // inferred from direct assay /// 0050718 // positive regulation of interleukin-1 beta secretion // inferred from electronic annotation /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation /// 0051209 // release of sequestered calcium ion into cytosol // inferred from electronic annotation /// 0051259 // protein oligomerization // inferred from electronic annotation /// 0051495 // positive regulation of cytoskeleton organization // inferred from sequence or structural similarity /// 0051495 // positive regulation of cytoskeleton organization // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from electronic annotation /// 0051602 // response to electrical stimulus // inferred from electronic annotation /// 0051709 // regulation of killing of cells of other organism // non-traceable author statement /// 0051899 // membrane depolarization // inferred from direct assay /// 0051899 // membrane depolarization // inferred from electronic annotation /// 0051901 // positive regulation of mitochondrial depolarization // inferred from electronic annotation /// 0072593 // reactive oxygen species metabolic process // inferred from electronic annotation","0005639 // integral to nuclear inner membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred by curator /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0032059 // bleb // inferred from sequence or structural similarity /// 0032059 // bleb // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043195 // terminal button // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation","0000287 // magnesium ion binding // inferred from electronic annotation /// 0001530 // lipopolysaccharide binding // inferred from sequence or structural similarity /// 0001530 // lipopolysaccharide binding // inferred from electronic annotation /// 0001614 // purinergic nucleotide receptor activity // inferred from direct assay /// 0001614 // purinergic nucleotide receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004931 // extracellular ATP-gated cation channel activity // inferred from direct assay /// 0004931 // extracellular ATP-gated cation channel activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from sequence or structural similarity /// 0005102 // receptor binding // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005507 // copper ion binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred by curator /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0015267 // channel activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // non-traceable author statement","chr12:121570682-121622605 (+) // 97.42 // q24.31"]
["11754111_s_at",51.14324,49.42149,56.76914,59.385323,57.201054,67.14159,-0.15603065,-0.20543575,-0.005467415,0.059532642,0.005467415,0.23663282,0.30945078,0.072872385,-1.1670413,-0.22285561,1.1670413,"down","PNOC",5368,"0007165 // signal transduction // traceable author statement /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007600 // sensory perception // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation","0001515 // opioid peptide activity // inferred from electronic annotation /// 0005184 // neuropeptide hormone activity // traceable author statement","chr8:28174801-28197003 (+) // 100.0 // p21.1"]
["11720167_at",7.703912,8.681335,8.814074,7.876156,8.78484,8.679224,-0.17215037,0.00017547607,0.022067308,-0.14024997,0.01727438,-0.0001757145,0.9699344,0.9156632,-1.0062011,-0.008918741,1.0062011,"down","SELL",6402,"0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0033198 // response to ATP // inferred from electronic annotation /// 0050776 // regulation of immune response // traceable author statement /// 0050900 // leukocyte migration // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0002020 // protease binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // traceable author statement /// 0030246 // carbohydrate binding // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0043208 // glycosphingolipid binding // traceable author statement /// 0050839 // cell adhesion molecule binding // inferred from electronic annotation","chr1:169659809-169680843 (-) // 97.84 // q24.2"]
["11743716_a_at",112.946976,108.535484,108.549904,75.69872,71.48895,72.409584,0.31739235,0.25991297,0.26010466,-0.25991297,-0.34246206,-0.3240013,0.014770908,4.8443915e-5,1.5030873,0.5879288,1.5030873,"up","BRWD1",54014,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0008360 // regulation of cell shape // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","","chr21:40557403-40685556 (-) // 99.26 // q22.2"]
["11719983_a_at",420.1253,417.42847,404.76913,282.05627,251.88954,231.01534,0.3142786,0.3049879,0.26055813,-0.26055813,-0.42374992,-0.548553,0.043581214,0.0011593424,1.6292732,0.7042285,1.6292732,"up","INPP5A",3632,"0007154 // cell communication // non-traceable author statement /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation","0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0004445 // inositol-polyphosphate 5-phosphatase activity // non-traceable author statement /// 0004445 // inositol-polyphosphate 5-phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042731 // PH domain binding // inferred from physical interaction /// 0052658 // inositol-1,4,5-trisphosphate 5-phosphatase activity // inferred from electronic annotation /// 0052659 // inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity // inferred from electronic annotation","chr10:134351334-134597211 (+) // 89.71 // q26.3"]
["11753289_s_at",8.907464,7.1505547,8.253989,9.037584,7.3836913,7.622189,0.16736627,-0.14959335,0.057442904,0.18828869,-0.10330629,-0.057443142,0.9672963,0.9084078,1.0110766,0.015892258,1.0110766,"up","LOC100506403 /// RUNX1","100506403 /// 861","0001501 // skeletal system development // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0002318 // myeloid progenitor cell differentiation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0009966 // regulation of signal transduction // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from direct assay /// 0030097 // hemopoiesis // traceable author statement /// 0030099 // myeloid cell differentiation // inferred from direct assay /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0030853 // negative regulation of granulocyte differentiation // inferred from mutant phenotype /// 0030854 // positive regulation of granulocyte differentiation // inferred from mutant phenotype /// 0030855 // epithelial cell differentiation // inferred from electronic annotation /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0035162 // embryonic hemopoiesis // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048266 // behavioral response to pain // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation /// 0048935 // peripheral nervous system neuron development // traceable author statement /// 0060216 // definitive hemopoiesis // inferred from electronic annotation /// 0071336 // regulation of hair follicle cell proliferation // inferred from electronic annotation /// 0071425 // hemopoietic stem cell proliferation // traceable author statement","0005604 // basement membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000975 // regulatory region DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0070491 // repressing transcription factor binding // inferred from electronic annotation","chr21:36206706-36259394 (-) // 69.17 // q22.12"]
["11746755_s_at",20.57775,21.841938,23.141127,19.152723,18.73713,29.820272,-0.04300785,0.04300785,0.12636614,-0.1465435,-0.17819309,0.49220037,0.98443776,0.9541244,-1.0095408,-0.013699212,1.0095408,"down","SLC28A3",64078,"0001895 // retina homeostasis // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0015860 // purine nucleoside transport // inferred from electronic annotation /// 0015864 // pyrimidine nucleoside transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0001882 // nucleoside binding // inferred from electronic annotation /// 0005415 // nucleoside:sodium symporter activity // inferred from electronic annotation /// 0015389 // pyrimidine- and adenine-specific:sodium symporter activity // inferred from electronic annotation /// 0015390 // purine-specific nucleoside:sodium symporter activity // inferred from electronic annotation","chr9:86892948-86955672 (-) // 98.76 // q21.32"]
["11746934_a_at",163.00496,150.56757,156.17728,140.0472,147.22478,141.05815,0.13070011,0.016195297,0.068968296,-0.08830261,-0.016195297,-0.07792616,0.19674987,0.02944377,1.0963912,0.13276266,1.0963912,"up","SPIRE1",56907,"0006810 // transport // inferred from electronic annotation /// 0048193 // Golgi vesicle transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation","chr18:12448630-12453113 (-) // 92.65 // p11.21"]
["11757250_x_at",8.522398,12.529982,10.228879,11.427702,9.914676,10.916826,-0.31026936,0.24578357,-0.046952486,0.11293459,-0.09196305,0.046952724,0.90289426,0.74505454,-1.0423123,-0.059787557,1.0423123,"down","INGX",27160,"","","","chrX:70711376-70712604 (-) // 75.0 // q13.1"]
["11753422_a_at",1294.0563,1181.2211,1196.6644,1149.3224,1028.7677,964.88947,0.1513691,0.019747734,0.038487434,-0.019747734,-0.17961407,-0.27209568,0.2691523,0.05466053,1.1704153,0.2270205,1.1704153,"up","BNIP3L",665,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0008634 // negative regulation of survival gene product expression // inferred from direct assay /// 0035694 // mitochondrial protein catabolic process // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005740 // mitochondrial envelope // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from mutant phenotype /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031224 // intrinsic to membrane // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0005521 // lamin binding // inferred from direct assay /// 0005521 // lamin binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay","chr8:26240606-26268126 (+) // 99.78 // p21.2"]
["11760915_a_at",8.485234,10.8006935,9.70606,12.752549,11.039598,11.287419,-0.36387944,-0.01578188,-0.16994834,0.22387958,0.015782118,0.047810078,0.3254656,0.08014907,-1.2133764,-0.27902716,1.2133764,"down","CYP3A5",1577,"0006805 // xenobiotic metabolic process // traceable author statement /// 0008202 // steroid metabolic process // traceable author statement /// 0009822 // alkaloid catabolic process // inferred from direct assay /// 0042737 // drug catabolic process // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070989 // oxidative demethylation // inferred from direct assay","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005792 // microsome // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0004497 // monooxygenase activity // inferred from sequence or structural similarity /// 0004497 // monooxygenase activity // inferred from electronic annotation /// 0004497 // monooxygenase activity // traceable author statement /// 0005506 // iron ion binding // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0016712 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen // inferred from electronic annotation /// 0019825 // oxygen binding // traceable author statement /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070330 // aromatase activity // inferred from electronic annotation","chr7:99270202-99277649 (-) // 39.33 // q22.1"]
["11745703_a_at",82.84855,75.92203,62.464596,45.56761,50.79587,56.934044,0.47431135,0.3483529,0.06687403,-0.3881564,-0.2314539,-0.06687355,0.18477026,0.025916917,1.4392734,0.5253406,1.4392734,"up","RCAN3",11123,"0009653 // anatomical structure morphogenesis // traceable author statement /// 0019722 // calcium-mediated signaling // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0031013 // troponin I binding // inferred from physical interaction","chr1:24840836-24861847 (+) // 100.0 // p36.11"]
["11734841_a_at",409.08807,394.16708,373.19037,351.22394,324.5525,321.96902,0.17626,0.12265587,0.0437603,-0.0437603,-0.15769958,-0.1692295,0.13038309,0.012828461,1.1791837,0.23778851,1.1791837,"up","RAD51",5888,"0000724 // double-strand break repair via homologous recombination // inferred from direct assay /// 0000724 // double-strand break repair via homologous recombination // inferred from electronic annotation /// 0000724 // double-strand break repair via homologous recombination // traceable author statement /// 0000730 // DNA recombinase assembly // traceable author statement /// 0006259 // DNA metabolic process // inferred from electronic annotation /// 0006268 // DNA unwinding involved in replication // inferred from direct assay /// 0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006302 // double-strand break repair // traceable author statement /// 0006310 // DNA recombination // traceable author statement /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006312 // mitotic recombination // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007126 // meiosis // inferred from electronic annotation /// 0007126 // meiosis // inferred from sequence or structural similarity /// 0007131 // reciprocal meiotic recombination // traceable author statement /// 0051106 // positive regulation of DNA ligation // inferred from direct assay /// 0051260 // protein homooligomerization // inferred from physical interaction","0000793 // condensed chromosome // inferred from sequence or structural similarity /// 0000794 // condensed nuclear chromosome // inferred from sequence or structural similarity /// 0000800 // lateral element // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0016605 // PML body // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from direct assay /// 0003697 // single-stranded DNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008094 // DNA-dependent ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0043142 // single-stranded DNA-dependent ATPase activity // inferred from direct assay","chr15:40987357-41024504 (+) // 87.94 // q15.1"]
["11716306_a_at",2049.3894,1892.7931,1799.2821,1955.9048,1736.5988,1757.2228,0.15122509,0.03654766,-0.03654766,0.08386707,-0.08770466,-0.070672035,0.69089663,0.385081,1.0535399,0.07524491,1.0535399,"up","ATXN10",25814,"0007399 // nervous system development // inferred from mutant phenotype /// 0008219 // cell death // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0030425 // dendrite // inferred from direct assay /// 0043025 // neuronal cell body // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from electronic annotation","chr22:46067682-46241189 (+) // 93.6 // q13.31"]
["11754933_s_at",720.31165,721.163,742.10846,818.3903,811.6945,738.53796,-0.0395298,-0.037825584,0.003479004,0.14463806,0.1327858,-0.003479004,0.323722,0.07941823,-1.0836812,-0.11594044,1.0836812,"down","TSC22D2",9819,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006970 // response to osmotic stress // inferred from electronic annotation","","0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation","chr3:150128994-150177903 (+) // 96.11 // q25.1"]
["11758650_s_at",4612.5825,5065.882,5027.0254,4309.4585,4536.304,4711.523,-0.015309334,0.11993027,0.108820915,-0.11337757,-0.039367676,0.015309334,0.3822719,0.11025094,1.0844468,0.11695926,1.0844468,"up","SNRPC",6631,"0000387 // spliceosomal snRNP assembly // inferred from direct assay /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005685 // U1 snRNP // inferred from direct assay /// 0005685 // U1 snRNP // inferred from electronic annotation /// 0015030 // Cajal body // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003727 // single-stranded RNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0030619 // U1 snRNA binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:34741238-34741551 (+) // 100.0 // p21.31"]
["11745820_s_at",638.99176,507.33118,500.06076,684.32465,582.76965,524.0674,0.20945835,-0.12341118,-0.14423561,0.30834198,0.07658672,-0.07658672,0.76327574,0.48804483,-1.0883758,-0.12217679,1.0883758,"down","PLAGL1",5325,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0007050 // cell cycle arrest // traceable author statement /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:144261436-144329543 (-) // 94.31 // q24.2"]
["11750538_x_at",5507.1772,5258.0166,5173.762,6569.9355,6091.059,5619.813,-0.0146045685,-0.08139992,-0.1047039,0.23996162,0.1307764,0.014603615,0.25775468,0.050173324,-1.1450019,-0.19534998,1.1450019,"down","TXN",7295,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006662 // glycerol ether metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006928 // cellular component movement // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0009314 // response to radiation // inferred from direct assay /// 0015949 // nucleobase-containing small molecule interconversion // traceable author statement /// 0022900 // electron transport chain // inferred from electronic annotation /// 0033158 // regulation of protein import into nucleus, translocation // inferred from direct assay /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0043388 // positive regulation of DNA binding // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 0046826 // negative regulation of protein export from nucleus // inferred from electronic annotation /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0015035 // protein disulfide oxidoreductase activity // inferred from electronic annotation /// 0015037 // peptide disulfide oxidoreductase activity // inferred from electronic annotation","chr9:113006307-113018763 (-) // 90.28 // q31.3"]
["11724469_at",539.19885,497.55875,512.1845,565.95166,529.5577,493.7959,0.050091743,-0.06585884,-0.024062157,0.119953156,0.024062157,-0.07681084,0.840059,0.6182926,-1.0250384,-0.035677902,1.0250384,"down","SLU7",10569,"0000375 // RNA splicing, via transesterification reactions // inferred from direct assay /// 0000380 // alternative nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0000389 // nuclear mRNA 3'-splice site recognition // inferred from direct assay /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from direct assay /// 0008380 // RNA splicing // inferred from electronic annotation /// 0033554 // cellular response to stress // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0030532 // small nuclear ribonucleoprotein complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0000386 // second spliceosomal transesterification activity // inferred from direct assay /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0030628 // pre-mRNA 3'-splice site binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:159828653-159846407 (-) // 86.7 // q33.3"]
["11738586_at",17.132416,15.116554,17.152178,16.335878,17.37433,18.16244,-0.000831604,-0.18143082,0.000831604,-0.06951618,0.019397259,0.083397865,0.69815123,0.39392993,-1.0508596,-0.07156989,1.0508596,"down","HGC6.3",100128124,"","","","chr6:168376603-168377619 (-) // 85.77 // q27"]
["11715422_a_at",2292.4854,2657.8909,2497.3914,2127.9019,2331.7812,2511.2043,-0.07401466,0.1393547,0.049494743,-0.18149567,-0.049494743,0.0574522,0.67034143,0.3585197,1.0688981,0.0961243,1.0688981,"up","BCAP31",10134,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0006955 // immune response // non-traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0032471 // reduction of endoplasmic reticulum calcium ion concentration // inferred from mutant phenotype /// 0035584 // calcium-mediated signaling using intracellular calcium source // inferred from mutant phenotype /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0051561 // elevation of mitochondrial calcium ion concentration // inferred from mutant phenotype /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype","0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005811 // lipid particle // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation /// 0071556 // integral to lumenal side of endoplasmic reticulum membrane // traceable author statement","0004872 // receptor activity // inferred from electronic annotation /// 0005102 // receptor binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chrX:152965951-152989802 (-) // 56.42 // q28"]
["11727584_a_at",81.65944,107.57542,88.605545,107.86381,130.88855,136.2457,-0.3995881,-0.0019311905,-0.28181076,0.0019316673,0.28105927,0.3389306,0.258495,0.050505824,-1.3519894,-0.43508384,1.3519894,"down","SPIN3",169981,"0007276 // gamete generation // inferred from electronic annotation","","","chrX:57017263-57021987 (-) // 90.02 // p11.21"]
["11759521_a_at",302.38004,300.4889,312.33865,313.64896,323.34238,312.87427,-0.047984123,-0.057035446,-0.0012359619,0.0048036575,0.04871559,0.0012359619,0.32592958,0.080527276,-1.037902,-0.053670224,1.037902,"down","SBNO1",55206,"","","","chr12:123778194-123849756 (-) // 96.01 // q24.31"]
["11743383_at",27.724232,30.528193,32.121758,31.89388,35.684464,37.832565,-0.20726776,-0.06827307,0.005135536,-0.005135536,0.15688086,0.24121332,0.3276452,0.08136241,-1.1656392,-0.22112125,1.1656392,"down","PRPF40A",55660,"0006397 // mRNA processing // inferred from electronic annotation /// 0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from mutant phenotype /// 0008380 // RNA splicing // inferred from electronic annotation /// 0016477 // cell migration // inferred from mutant phenotype /// 0032465 // regulation of cytokinesis // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016363 // nuclear matrix // inferred from direct assay /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr2:153508103-153574511 (-) // 95.18 // q23.3"]
["11746460_a_at",14.977519,15.838175,15.330342,14.293012,17.832014,13.04143,-0.016795635,0.06381154,0.016795635,-0.084284306,0.23487544,-0.21649218,0.9117688,0.76644325,1.0304236,0.043237597,1.0304236,"up","ZNF711",7552,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:84498996-84527248 (+) // 98.19 // q21.1"]
["11759209_at",9.847513,11.284933,10.750523,10.735006,9.815294,9.006033,-0.062245846,0.13432074,0.064329624,0.062245846,-0.06697416,-0.19111395,0.6197084,0.29978606,1.0797887,0.110749,1.0797887,"up","AKD1",221264,"0006139 // nucleobase-containing compound metabolic process // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0019205 // nucleobase-containing compound kinase activity // inferred from electronic annotation","chr6:109870886-110012415 (-) // 89.82 // q21"]
["11760920_x_at",260.91763,222.327,222.4518,237.23264,229.76118,231.2014,0.17895174,-0.05195999,-0.051150322,0.041659832,-0.0045075417,0.0045075417,0.9615908,0.8910997,1.0079288,0.011393799,1.0079288,"up","PHKG2",5261,"0005975 // carbohydrate metabolic process // traceable author statement /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005977 // glycogen metabolic process // traceable author statement /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0005978 // glycogen biosynthetic process // inferred from electronic annotation /// 0005980 // glycogen catabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006091 // generation of precursor metabolites and energy // traceable author statement /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045819 // positive regulation of glycogen catabolic process // traceable author statement","0005625 // soluble fraction // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005964 // phosphorylase kinase complex // traceable author statement /// 0005964 // phosphorylase kinase complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // non-traceable author statement /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004689 // phosphorylase kinase activity // traceable author statement /// 0004689 // phosphorylase kinase activity // inferred from electronic annotation /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0050321 // tau-protein kinase activity // traceable author statement /// 0050321 // tau-protein kinase activity // inferred from electronic annotation","chr16:30759590-30771712 (+) // 94.93 // p11.2"]
["11742899_a_at",454.9987,437.6197,455.27728,367.1793,337.43018,360.7701,0.18278122,0.12659645,0.18366432,-0.12659645,-0.24849224,-0.15200138,0.04441424,0.0012255615,1.2657952,0.34004402,1.2657952,"up","CGGBP1",8545,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // traceable author statement","chr3:88101094-88108218 (-) // 96.05 // p11.1"]
["11762554_at",24.62508,27.051622,22.310589,19.773466,22.781471,31.874344,0.056133747,0.19172049,-0.08626604,-0.2604289,-0.056133747,0.428401,0.98039234,0.9433945,1.0115609,0.016583202,1.0115609,"up","CPAMD8",27151,"0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004866 // endopeptidase inhibitor activity // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr19:17068361-17137625 (-) // 93.17 // p13.11"]
["11717906_s_at",2110.8672,1952.6171,1914.0862,1930.1106,1874.8761,1847.7953,0.13516617,0.02273941,-0.0060138702,0.0060138702,-0.035874367,-0.05686474,0.46575546,0.16495182,1.0566803,0.07953898,1.0566803,"up","STAU1",6780,"0008298 // intracellular mRNA localization // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005791 // rough endoplasmic reticulum // inferred from electronic annotation /// 0005791 // rough endoplasmic reticulum // traceable author statement /// 0005875 // microtubule associated complex // traceable author statement /// 0010494 // cytoplasmic stress granule // inferred from sequence or structural similarity /// 0010494 // cytoplasmic stress granule // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr20:47729875-47804907 (-) // 95.73 // q13.13"]
["11749926_a_at",14.658004,16.318895,16.863832,14.986055,16.863832,17.78896,-0.17854905,-0.023694515,0.023694515,-0.14661717,0.023694515,0.10074425,0.8370525,0.6132702,-1.0367899,-0.05212356,1.0367899,"down","C4A /// C4B /// LOC100293534","100293534 /// 720 /// 721","0006954 // inflammatory response // inferred from electronic annotation /// 0006956 // complement activation // inferred from electronic annotation /// 0006956 // complement activation // traceable author statement /// 0006958 // complement activation, classical pathway // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation /// 0030449 // regulation of complement activation // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement","0004866 // endopeptidase inhibitor activity // inferred from electronic annotation","chr6:31949851-31952468 (+) // 97.88 // p21.33 /// chr6:31982589-31985206 (+) // 97.88 // p21.33"]
["11735951_at",155.71667,141.58391,159.39568,122.03861,158.12302,140.67651,0.06863308,-0.06863308,0.10232258,-0.2829523,0.09075689,-0.077908516,0.67090863,0.35946208,1.0898595,0.12414214,1.0898595,"up","SSTR4",6754,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007187 // G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0038170 // somatostatin signaling pathway // traceable author statement /// 0038170 // somatostatin signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004994 // somatostatin receptor activity // inferred from electronic annotation /// 0004994 // somatostatin receptor activity // traceable author statement","chr20:23016056-23017314 (+) // 97.54 // p11.21"]
["11728198_at",65.01081,55.553703,59.223244,44.22621,58.240555,61.18608,0.14658546,-0.080210686,0.012069702,-0.4091921,-0.012069702,0.059109688,0.7097249,0.41029295,1.1071614,0.14686555,1.1071614,"up","ALG1",56052,"0006486 // protein glycosylation // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0009103 // lipopolysaccharide biosynthetic process // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000030 // mannosyltransferase activity // traceable author statement /// 0004578 // chitobiosyldiphosphodolichol beta-mannosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr16:5121809-5137378 (+) // 71.93 // p13.3"]
["11734897_a_at",13.519246,16.66854,17.315323,13.362106,12.478823,15.993962,-0.12125635,0.1808567,0.23577833,-0.13812375,-0.23678923,0.12125635,0.62028867,0.30045605,1.1352514,0.18301181,1.1352514,"up","MATN1",4146,"0002062 // chondrocyte differentiation // inferred from electronic annotation /// 0003429 // growth plate cartilage chondrocyte morphogenesis // inferred from electronic annotation /// 0006461 // protein complex assembly // traceable author statement /// 0030500 // regulation of bone mineralization // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // traceable author statement","0005201 // extracellular matrix structural constituent // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr1:31184125-31196434 (-) // 92.14 // p35.2"]
["11719916_at",58.47968,67.37527,72.997345,74.1411,69.00809,78.78724,-0.27936935,-0.07508564,0.040538788,0.06296873,-0.040539265,0.15065718,0.52329654,0.20938,-1.1190964,-0.16233431,1.1190964,"down","IL1B",3553,"0000165 // MAPK cascade // inferred from mutant phenotype /// 0000187 // activation of MAPK activity // inferred from direct assay /// 0001660 // fever generation // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0001934 // positive regulation of protein phosphorylation // non-traceable author statement /// 0002439 // chronic inflammatory response to antigenic stimulus // inferred from electronic annotation /// 0002711 // positive regulation of T cell mediated immunity // inferred by curator /// 0006915 // apoptotic process // traceable author statement /// 0006916 // anti-apoptosis // inferred from direct assay /// 0006954 // inflammatory response // inferred from direct assay /// 0006954 // inflammatory response // non-traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0007566 // embryo implantation // traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0007611 // learning or memory // inferred from electronic annotation /// 0007613 // memory // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0009408 // response to heat // inferred from electronic annotation /// 0010193 // response to ozone // inferred from electronic annotation /// 0010243 // response to organic nitrogen // inferred from electronic annotation /// 0010332 // response to gamma radiation // inferred from electronic annotation /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from direct assay /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from sequence or structural similarity /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010829 // negative regulation of glucose transport // inferred from sequence or structural similarity /// 0010829 // negative regulation of glucose transport // inferred from electronic annotation /// 0014050 // negative regulation of glutamate secretion // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014805 // smooth muscle adaptation // non-traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from direct assay /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0030213 // hyaluronan biosynthetic process // inferred from direct assay /// 0030593 // neutrophil chemotaxis // inferred from electronic annotation /// 0030728 // ovulation // inferred from electronic annotation /// 0030730 // sequestering of triglyceride // inferred from direct assay /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // inferred by curator /// 0031622 // positive regulation of fever generation // inferred from sequence or structural similarity /// 0031622 // positive regulation of fever generation // inferred from electronic annotation /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from direct assay /// 0032308 // positive regulation of prostaglandin secretion // inferred from sequence or structural similarity /// 0032308 // positive regulation of prostaglandin secretion // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032725 // positive regulation of granulocyte macrophage colony-stimulating factor production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from direct assay /// 0032755 // positive regulation of interleukin-6 production // traceable author statement /// 0032755 // positive regulation of interleukin-6 production // inferred from electronic annotation /// 0032755 // positive regulation of interleukin-6 production // inferred from direct assay /// 0032757 // positive regulation of interleukin-8 production // inferred from direct assay /// 0032874 // positive regulation of stress-activated MAPK cascade // inferred from electronic annotation /// 0033129 // positive regulation of histone phosphorylation // non-traceable author statement /// 0033198 // response to ATP // inferred from electronic annotation /// 0033280 // response to vitamin D // inferred from electronic annotation /// 0033591 // response to L-ascorbic acid // inferred from electronic annotation /// 0034116 // positive regulation of heterotypic cell-cell adhesion // inferred from direct assay /// 0034116 // positive regulation of heterotypic cell-cell adhesion // non-traceable author statement /// 0035066 // positive regulation of histone acetylation // non-traceable author statement /// 0035176 // social behavior // inferred from electronic annotation /// 0035505 // positive regulation of myosin light chain kinase activity // inferred from direct assay /// 0035690 // cellular response to drug // inferred from direct assay /// 0042060 // wound healing // inferred from electronic annotation /// 0042102 // positive regulation of T cell proliferation // inferred from direct assay /// 0042221 // response to chemical stimulus // inferred from electronic annotation /// 0042346 // positive regulation of NF-kappaB import into nucleus // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043122 // regulation of I-kappaB kinase/NF-kappaB cascade // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0043278 // response to morphine // inferred from electronic annotation /// 0043407 // negative regulation of MAP kinase activity // inferred from sequence or structural similarity /// 0043407 // negative regulation of MAP kinase activity // inferred from electronic annotation /// 0043491 // protein kinase B signaling cascade // inferred from mutant phenotype /// 0043507 // positive regulation of JUN kinase activity // inferred from electronic annotation /// 0045080 // positive regulation of chemokine biosynthetic process // inferred from electronic annotation /// 0045086 // positive regulation of interleukin-2 biosynthetic process // inferred from mutant phenotype /// 0045410 // positive regulation of interleukin-6 biosynthetic process // inferred from electronic annotation /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from direct assay /// 0045766 // positive regulation of angiogenesis // inferred from sequence or structural similarity /// 0045766 // positive regulation of angiogenesis // inferred from electronic annotation /// 0045833 // negative regulation of lipid metabolic process // inferred from sequence or structural similarity /// 0045833 // negative regulation of lipid metabolic process // inferred from electronic annotation /// 0045840 // positive regulation of mitosis // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046330 // positive regulation of JNK cascade // inferred from electronic annotation /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from electronic annotation /// 0046827 // positive regulation of protein export from nucleus // non-traceable author statement /// 0050796 // regulation of insulin secretion // inferred from direct assay /// 0050900 // leukocyte migration // inferred from electronic annotation /// 0050995 // negative regulation of lipid catabolic process // inferred from direct assay /// 0050996 // positive regulation of lipid catabolic process // inferred from sequence or structural similarity /// 0050996 // positive regulation of lipid catabolic process // inferred from electronic annotation /// 0051044 // positive regulation of membrane protein ectodomain proteolysis // inferred from direct assay /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0060355 // positive regulation of cell adhesion molecule production // non-traceable author statement /// 0060559 // positive regulation of calcidiol 1-monooxygenase activity // inferred from direct assay /// 0070164 // negative regulation of adiponectin secretion // inferred from sequence or structural similarity /// 0070164 // negative regulation of adiponectin secretion // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from electronic annotation /// 0070487 // monocyte aggregation // inferred from direct assay /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern /// 0071310 // cellular response to organic substance // inferred from direct assay /// 0071407 // cellular response to organic cyclic compound // inferred from direct assay /// 0071639 // positive regulation of monocyte chemotactic protein-1 production // inferred from direct assay","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from mutant phenotype /// 0005615 // extracellular space // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0030141 // secretory granule // inferred from electronic annotation /// 0031982 // vesicle // inferred from electronic annotation","0005125 // cytokine activity // inferred from direct assay /// 0005125 // cytokine activity // inferred from mutant phenotype /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005149 // interleukin-1 receptor binding // non-traceable author statement /// 0005149 // interleukin-1 receptor binding // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction","chr2:113587327-113594358 (-) // 94.91 // q13"]
["11749120_a_at",8.477709,10.330354,11.164575,8.179255,8.781359,11.195245,-0.16795659,0.117186785,0.22922516,-0.21966147,-0.117186785,0.23318315,0.8470902,0.6308651,1.067355,0.09404014,1.067355,"up","SCUBE2",57758,"","0005576 // extracellular region // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr11:9042121-9113093 (-) // 96.33 // p15.4"]
["11736867_x_at",7.2033935,6.39512,6.070463,5.8562727,6.763614,6.572919,0.1519239,-0.019781351,-0.094946146,-0.14677,0.061041594,0.019781351,0.90063274,0.74042326,1.0241175,0.034381207,1.0241175,"up","MMP16",4325,"0006508 // proteolysis // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030574 // collagen catabolic process // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005796 // Golgi lumen // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008047 // enzyme activator activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:89049461-89339717 (-) // 98.65 // q21.3"]
["11748194_a_at",32.645657,34.576412,25.122389,32.045376,26.689806,24.282673,0.15868855,0.24158573,-0.21922874,0.13191366,-0.13191366,-0.26827526,0.7457692,0.4616688,1.1093954,0.14977363,1.1093954,"up","POLL",27343,"0006260 // DNA replication // non-traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006289 // nucleotide-excision repair // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0016446 // somatic hypermutation of immunoglobulin genes // non-traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003887 // DNA-directed DNA polymerase activity // inferred from electronic annotation /// 0003887 // DNA-directed DNA polymerase activity // non-traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:103342749-103347916 (-) // 92.49 // q24.32"]
["11723018_at",425.37112,374.5192,363.88782,322.21686,377.28583,382.00226,0.17837334,-0.005309105,-0.046854973,-0.22231674,0.005309105,0.02323246,0.6775625,0.36734736,1.0767337,0.10666149,1.0767337,"up","LCMT2",9836,"0008033 // tRNA processing // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation","","0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr15:43619973-43622891 (-) // 87.55 // q15.3"]
["11751273_a_at",25.567057,27.524023,28.746607,29.120739,29.153616,28.728521,-0.16865158,-0.062246323,0.00045394897,0.01910925,0.020737171,-0.00045394897,0.43854815,0.14534815,-1.06433,-0.08994551,1.06433,"down","GPR34",2857,"0006886 // intracellular protein transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0035589 // G-protein coupled purinergic nucleotide receptor signaling pathway // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0045028 // G-protein coupled purinergic nucleotide receptor activity // inferred from electronic annotation","chrX:41548250-41556032 (+) // 90.89 // p11.4"]
["11763524_a_at",74.341995,67.823105,62.24646,59.5697,70.343254,69.96752,0.109945774,-0.022454739,-0.14623928,-0.20965195,0.030180931,0.022454262,0.9155485,0.7767751,1.0229646,0.032756217,1.0229646,"up","PPARA",5465,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006629 // lipid metabolic process // traceable author statement /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0008544 // epidermis development // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010745 // negative regulation of macrophage derived foam cell differentiation // inferred by curator /// 0010745 // negative regulation of macrophage derived foam cell differentiation // inferred from direct assay /// 0010871 // negative regulation of receptor biosynthetic process // inferred from direct assay /// 0010887 // negative regulation of cholesterol storage // inferred from direct assay /// 0010891 // negative regulation of sequestering of triglyceride // inferred from direct assay /// 0015908 // fatty acid transport // traceable author statement /// 0019217 // regulation of fatty acid metabolic process // inferred from electronic annotation /// 0030522 // intracellular receptor mediated signaling pathway // inferred from direct assay /// 0030522 // intracellular receptor mediated signaling pathway // inferred from electronic annotation /// 0032000 // positive regulation of fatty acid beta-oxidation // traceable author statement /// 0032099 // negative regulation of appetite // inferred from sequence or structural similarity /// 0032099 // negative regulation of appetite // inferred from electronic annotation /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation /// 0042157 // lipoprotein metabolic process // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // inferred from direct assay /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045776 // negative regulation of blood pressure // inferred from electronic annotation /// 0045820 // negative regulation of glycolysis // inferred by curator /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046321 // positive regulation of fatty acid oxidation // inferred from sequence or structural similarity /// 0046321 // positive regulation of fatty acid oxidation // inferred from electronic annotation /// 0072363 // regulation of glycolysis by positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0072366 // regulation of cellular ketone metabolic process by positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0072369 // regulation of lipid transport by positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0001103 // RNA polymerase II repressing transcription factor binding // inferred from physical interaction /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from direct assay /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008144 // drug binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from direct assay /// 0008289 // lipid binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0031624 // ubiquitin conjugating enzyme binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from sequence or structural similarity /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070215 // MDM2 binding // inferred from electronic annotation","chr22:46567042-46611227 (+) // 58.32 // q13.31"]
["11759314_at",44.197426,42.586716,43.771317,37.785328,45.112007,41.814323,0.0337677,-0.019791126,0.019791126,-0.1923685,0.06331682,-0.046197414,0.7094357,0.40990788,1.0494783,0.069672324,1.0494783,"up","CRHR2",1395,"0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // traceable author statement /// 0071376 // cellular response to corticotropin-releasing hormone stimulus // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015056 // corticotrophin-releasing factor receptor activity // traceable author statement","chr7:30691830-30722314 (-) // 96.93 // p14.3"]
["11746308_a_at",37.22914,34.23781,34.379055,35.692745,33.50845,34.031345,0.11787224,-0.0029697418,0.0029697418,0.057070732,-0.034035206,-0.011695862,0.77172124,0.49998128,1.0249196,0.035510782,1.0249196,"up","LINC00494",284749,"","","","chr20:46993631-46999381 (+) // 68.2 // q13.13"]
["11756679_a_at",579.88947,486.9441,527.4999,751.22266,627.9733,596.5775,-0.02046585,-0.27248764,-0.15707302,0.35299683,0.09445953,0.02046585,0.30283222,0.06966125,-1.2362607,-0.30598295,1.2362607,"down","ALDH3A2",224,"0006081 // cellular aldehyde metabolic process // inferred from direct assay /// 0006081 // cellular aldehyde metabolic process // non-traceable author statement /// 0006081 // cellular aldehyde metabolic process // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from mutant phenotype /// 0007422 // peripheral nervous system development // inferred from mutant phenotype /// 0008152 // metabolic process // inferred from electronic annotation /// 0008544 // epidermis development // inferred from mutant phenotype /// 0033306 // phytol metabolic process // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004029 // aldehyde dehydrogenase (NAD) activity // inferred from direct assay /// 0004029 // aldehyde dehydrogenase (NAD) activity // inferred from mutant phenotype /// 0004029 // aldehyde dehydrogenase (NAD) activity // inferred from electronic annotation /// 0004030 // aldehyde dehydrogenase [NAD(P)+] activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016620 // oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor // inferred from electronic annotation","chr17:19559457-19579055 (+) // 89.71 // p11.2"]
["11763695_a_at",52.780476,61.125076,57.723488,59.64139,67.056244,61.056404,-0.19322395,0.01853609,-0.06406975,-0.016914368,0.152143,0.016914845,0.48617202,0.18041366,-1.0945215,-0.13030033,1.0945215,"down","ABTB1",80325,"0006412 // translation // inferred from electronic annotation /// 0006414 // translational elongation // inferred from electronic annotation","0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0003746 // translation elongation factor activity // inferred from electronic annotation","chr3:127391808-127399766 (+) // 97.99 // q21.3"]
["11741065_a_at",157.21194,178.29768,157.53209,140.01976,134.18158,140.68149,0.08013916,0.26171637,0.083073616,-0.08694124,-0.14838505,-0.08013916,0.15424228,0.018061167,1.1865708,0.24679814,1.1865708,"up","EPHX1",2052,"0001889 // liver development // inferred from electronic annotation /// 0006725 // cellular aromatic compound metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009636 // response to toxin // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0019439 // aromatic compound catabolic process // inferred from electronic annotation /// 0071310 // cellular response to organic substance // inferred from electronic annotation /// 0071385 // cellular response to glucocorticoid stimulus // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004301 // epoxide hydrolase activity // inferred from electronic annotation /// 0004301 // epoxide hydrolase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from electronic annotation /// 0033961 // cis-stilbene-oxide hydrolase activity // inferred from electronic annotation","chr1:225997793-226033260 (+) // 98.11 // q42.12"]
["11742427_s_at",43.4923,53.69355,57.58638,51.919807,58.620853,67.34367,-0.35447836,-0.050489426,0.050489426,-0.09895325,0.07617617,0.27630377,0.6018778,0.28158802,-1.1508249,-0.20266834,1.1508249,"down","STRC",161497,"0007605 // sensory perception of sound // inferred from electronic annotation /// 0050910 // detection of mechanical stimulus involved in sensory perception of sound // inferred from electronic annotation /// 0060088 // auditory receptor cell stereocilium organization // inferred from electronic annotation /// 0060088 // auditory receptor cell stereocilium organization // inferred from sequence or structural similarity","0009986 // cell surface // inferred from electronic annotation /// 0032426 // stereocilium bundle tip // inferred from electronic annotation /// 0032426 // stereocilium bundle tip // inferred from sequence or structural similarity /// 0060091 // kinocilium // inferred from sequence or structural similarity","","chr15:43891760-43910998 (-) // 98.84 // q15.3 /// chr15:43991576-44010460 (-) // 98.4 // q15.3"]
["11747511_x_at",77.75856,88.44906,86.54282,81.35031,94.03962,88.35273,-0.169343,0.016501904,-0.014930248,-0.10419655,0.104923725,0.014930248,0.7746195,0.5044346,-1.0432919,-0.0611429,1.0432919,"down","HLA-DQB1",3119,"0002381 // immunoglobulin production involved in immunoglobulin mediated immune response // inferred from direct assay /// 0002455 // humoral immune response mediated by circulating immunoglobulin // inferred from direct assay /// 0002504 // antigen processing and presentation of peptide or polysaccharide antigen via MHC class II // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0031295 // T cell costimulation // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042613 // MHC class II protein complex // inferred from electronic annotation","0032395 // MHC class II receptor activity // non-traceable author statement","chr6:32628844-32634472 (-) // 88.93 // p21.32"]
["11736145_a_at",281.62292,224.24237,213.20596,239.82068,191.77864,175.74092,0.36511183,0.036405563,-0.036405563,0.13330269,-0.18921089,-0.3152032,0.56793267,0.24861643,1.1854278,0.24540778,1.1854278,"up","SPATA20",64847,"0006013 // mannose metabolic process // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004476 // mannose-6-phosphate isomerase activity // inferred from electronic annotation","chr17:48624449-48633211 (+) // 96.91 // q21.33"]
["11716111_x_at",10.598685,12.613884,12.970281,11.664438,12.494615,12.446534,-0.23463988,0.01648736,0.056684494,-0.096408606,0.0027811527,-0.0027811527,0.93983835,0.83347744,-1.0151454,-0.02168641,1.0151454,"down","PIGR",5284,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:207101863-207119811 (-) // 79.88 // q32.1"]
["11741641_a_at",78.93928,93.607086,74.22289,70.52203,87.43651,86.31672,-0.06444836,0.18142557,-0.15332747,-0.22711754,0.08304405,0.06444883,0.97312564,0.9238734,1.0100486,0.0144247515,1.0100486,"up","ZFX",7543,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003713 // transcription coactivator activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:24167152-24232628 (+) // 91.12 // p22.11"]
["11752497_a_at",349.95255,310.40817,305.22046,428.42587,342.33157,308.16068,0.102378845,-0.07061386,-0.09492874,0.39426517,0.07061386,-0.0810976,0.69167805,0.3862508,-1.1087866,-0.1489817,1.1087866,"down","MEF2D",4209,"0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001958 // endochondral ossification // inferred from electronic annotation /// 0002062 // chondrocyte differentiation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007512 // adult heart development // inferred from expression pattern /// 0007517 // muscle organ development // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from direct assay /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from electronic annotation /// 0033613 // activating transcription factor binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr1:156436007-156470545 (-) // 92.49 // q22"]
["11742429_x_at",7.077954,7.2023587,6.019191,7.116258,7.939823,7.887597,-0.01646185,0.008675337,-0.2502246,-0.008675337,0.14931273,0.13979173,0.42722896,0.1379726,-1.1324757,-0.17948014,1.1324757,"down","ZNF716",441234,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:57509882-57533265 (+) // 73.13 // p11.2"]
["11746471_s_at",165.57596,108.66122,115.960724,149.52078,124.88634,107.13925,0.46036673,-0.14728928,-0.053489685,0.31322002,0.053489685,-0.16763878,0.9773879,0.9355776,1.0140805,0.020172216,1.0140805,"up","MAP4K4",9448,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006950 // response to stress // inferred from direct assay /// 0007243 // intracellular protein kinase cascade // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0046328 // regulation of JNK cascade // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005083 // small GTPase regulator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr2:102413695-102508449 (+) // 95.66 // q11.2"]
["11721410_s_at",50.394165,54.25623,45.984524,61.68427,55.130276,66.64851,-0.11806011,-0.011528015,-0.25016832,0.17358589,0.011528015,0.2852559,0.2687745,0.05452757,-1.217039,-0.28337538,1.217039,"down","STK16",8576,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005798 // Golgi-associated vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr2:220110200-220115174 (+) // 99.32 // q35"]
["11729078_a_at",7.494877,7.646637,6.314419,6.097551,5.992129,6.80201,0.19359922,0.22251987,-0.053655624,-0.10407567,-0.12923694,0.053655624,0.45768854,0.15934548,1.1334391,0.18070683,1.1334391,"up","SLC26A7",115111,"0001696 // gastric acid secretion // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006820 // anion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from direct assay /// 0006821 // chloride transport // inferred from electronic annotation /// 0008272 // sulfate transport // inferred from direct assay /// 0008272 // sulfate transport // inferred from electronic annotation /// 0015701 // bicarbonate transport // inferred from sequence or structural similarity /// 0015701 // bicarbonate transport // inferred from electronic annotation /// 0019532 // oxalate transport // inferred from direct assay /// 0055085 // transmembrane transport // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from mutant phenotype /// 0016323 // basolateral plasma membrane // inferred from sequence or structural similarity /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from electronic annotation","0005253 // anion channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from direct assay /// 0005254 // chloride channel activity // inferred from electronic annotation /// 0015106 // bicarbonate transmembrane transporter activity // inferred from sequence or structural similarity /// 0015106 // bicarbonate transmembrane transporter activity // inferred from electronic annotation /// 0015116 // sulfate transmembrane transporter activity // inferred from direct assay /// 0015116 // sulfate transmembrane transporter activity // inferred from electronic annotation /// 0015301 // anion:anion antiporter activity // inferred from electronic annotation /// 0019531 // oxalate transmembrane transporter activity // inferred from direct assay","chr8:92261515-92410383 (+) // 98.58 // q21.3"]
["11726480_at",107.94933,108.18943,133.22285,106.18705,122.836426,136.96857,-0.09479475,-0.09158945,0.20869207,-0.11854124,0.09158945,0.24869585,0.86906993,0.6733865,-1.0471576,-0.06647865,1.0471576,"down","FATE1",89885,"","0005783 // endoplasmic reticulum // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chrX:150884507-150891666 (+) // 92.97 // q28"]
["11731581_a_at",225.0462,215.27168,228.94756,267.97314,226.54565,185.91875,-0.004790783,-0.0688529,0.020005703,0.24707699,0.004790306,-0.28033924,0.98604596,0.9593561,-1.0058315,-0.0083886115,1.0058315,"down","WASF1",8936,"0006461 // protein complex assembly // non-traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0030041 // actin filament polymerization // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0030027 // lamellipodium // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation","chr6:110421021-110501207 (-) // 99.66 // q21"]
["11716458_a_at",1019.10486,944.7595,983.86725,1147.5414,1121.3372,1109.3893,-0.061231613,-0.17051506,-0.11199856,0.110012054,0.076685905,0.061231613,0.08115887,0.0047305273,-1.1464909,-0.19722494,1.1464909,"down","MRPS35",60488,"0042769 // DNA damage response, detection of DNA damage // non-traceable author statement /// 0043043 // peptide biosynthetic process // inferred by curator","0005739 // mitochondrion // inferred from electronic annotation /// 0005763 // mitochondrial small ribosomal subunit // inferred from sequence or structural similarity /// 0005763 // mitochondrial small ribosomal subunit // non-traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","","chr12:27863715-27909228 (+) // 86.29 // p11.22"]
["11757069_s_at",1031.3414,937.3625,959.7362,1207.606,1102.6163,1015.35675,0.011267662,-0.12657547,-0.092544556,0.23889542,0.107676506,-0.011267662,0.3549444,0.095420726,-1.1337104,-0.18105213,1.1337104,"down","LOC100506562",100506562,"","","","chr2:222808882-222809530 (+) // 96.23 // q36.1 /// chr22:42072546-42073161 (-) // 90.95 // q13.2"]
["11731421_a_at",305.26688,328.72293,307.44183,395.67914,380.82635,394.3524,-0.21293163,-0.1061306,-0.20268917,0.16132832,0.1061306,0.1564827,0.044074457,0.0011912405,-1.2442108,-0.31523097,1.2442108,"down","UBE2G2",7327,"0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030433 // ER-associated protein catabolic process // inferred from electronic annotation /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation","chr21:46188494-46222170 (-) // 81.22 // q22.3"]
["11731066_x_at",10.945703,12.259043,10.107274,9.584183,10.000196,12.464856,0.057485342,0.22096682,-0.057485342,-0.1341517,-0.07285094,0.24498701,0.87709075,0.6908626,1.0431844,0.0609942,1.0431844,"up","GIMAP1",170575,"0030183 // B cell differentiation // inferred from electronic annotation /// 0030217 // T cell differentiation // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr7:150413644-150418881 (+) // 86.42 // q36.1"]
["11738896_a_at",13.767995,16.21112,17.380104,16.391304,18.756454,19.599173,-0.2938652,-0.058199883,0.042253017,-0.042253017,0.15220356,0.21560907,0.47040087,0.16875552,-1.1581247,-0.21179058,1.1581247,"down","CD200R1L",344807,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr3:112538618-112564797 (-) // 79.4 // q13.2"]
["11729057_at",13.871101,10.802693,12.613884,17.322908,13.871101,13.338621,0.02823639,-0.33245492,-0.10883355,0.348835,0.02823639,-0.028236628,0.48879698,0.1823643,-1.1924777,-0.25396228,1.1924777,"down","C19orf69",100170765,"","","","chr19:41949062-41950673 (+) // 70.1 // q13.2"]
["11754026_a_at",47.479816,44.783836,38.954296,77.07425,67.27551,61.24579,-0.18364811,-0.2679844,-0.4691801,0.51528597,0.31911945,0.18364763,0.09997388,0.0072802114,-1.5651366,-0.6462885,1.5651366,"down","IL8",3576,"0001525 // angiogenesis // traceable author statement /// 0002237 // response to molecule of bacterial origin // inferred from direct assay /// 0006928 // cellular component movement // traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0019722 // calcium-mediated signaling // traceable author statement /// 0030155 // regulation of cell adhesion // inferred from direct assay /// 0030593 // neutrophil chemotaxis // inferred from genetic interaction /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0031623 // receptor internalization // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0042119 // neutrophil activation // traceable author statement /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from expression pattern /// 0045091 // regulation of retroviral genome replication // inferred from direct assay /// 0045744 // negative regulation of G-protein coupled receptor protein signaling pathway // inferred from direct assay /// 0048566 // embryonic digestive tract development // inferred from expression pattern /// 0050930 // induction of positive chemotaxis // inferred from genetic interaction /// 0071222 // cellular response to lipopolysaccharide // inferred from direct assay /// 0071347 // cellular response to interleukin-1 // inferred from expression pattern /// 0071356 // cellular response to tumor necrosis factor // inferred from expression pattern /// 0090023 // positive regulation of neutrophil chemotaxis // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005622 // intracellular // inferred from direct assay","0005125 // cytokine activity // inferred from electronic annotation /// 0005153 // interleukin-8 receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008009 // chemokine activity // inferred from electronic annotation /// 0008009 // chemokine activity // traceable author statement","chr4:74606280-74608177 (+) // 70.26 // q13.3"]
["11745068_a_at",28.04785,33.74789,34.56469,26.812723,28.751282,31.205284,-0.094818115,0.17208862,0.20659065,-0.15979052,-0.05908203,0.05908203,0.58560646,0.26548678,1.1079432,0.14788389,1.1079432,"up","ZNF833P",401898,"","0005622 // intracellular // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:11750590-11797382 (+) // 70.58 // p13.2"]
["11743790_a_at",40.24763,34.232964,40.28904,39.44099,32.67856,34.28231,0.13032389,-0.10319376,0.13180733,0.1011157,-0.17023563,-0.1011157,0.69142467,0.38580072,1.079022,0.10972434,1.079022,"up","FRS2",10818,"0000186 // activation of MAPKK activity // traceable author statement /// 0000187 // activation of MAPK activity // inferred from electronic annotation /// 0001702 // gastrulation with mouth forming second // inferred from electronic annotation /// 0001759 // organ induction // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007185 // transmembrane receptor protein tyrosine phosphatase signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007405 // neuroblast proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from genetic interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0008595 // anterior/posterior axis specification, embryo // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0046619 // optic placode formation involved in camera-type eye formation // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050678 // regulation of epithelial cell proliferation // inferred from electronic annotation /// 0060527 // prostate epithelial cord arborization involved in prostate glandular acinus morphogenesis // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005068 // transmembrane receptor protein tyrosine kinase adaptor activity // traceable author statement /// 0005068 // transmembrane receptor protein tyrosine kinase adaptor activity // inferred from electronic annotation /// 0005104 // fibroblast growth factor receptor binding // inferred from physical interaction /// 0005158 // insulin receptor binding // inferred from electronic annotation /// 0005168 // neurotrophin TRKA receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0019211 // phosphatase activator activity // traceable author statement","chr12:69864128-69973573 (+) // 98.22 // q15"]
["11720383_a_at",489.9514,489.72052,494.22272,464.2972,458.24805,470.59204,0.029420853,0.028740883,0.04194355,-0.048169136,-0.06708908,-0.028740883,0.060012247,0.0023733838,1.058021,0.08136819,1.058021,"up","STX6",10228,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006906 // vesicle fusion // inferred from physical interaction /// 0007032 // endosome organization // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0042147 // retrograde transport, endosome to Golgi // inferred from mutant phenotype /// 0048193 // Golgi vesicle transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // traceable author statement /// 0032588 // trans-Golgi network membrane // inferred from sequence or structural similarity /// 0032588 // trans-Golgi network membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005484 // SNAP receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:180941851-180992257 (-) // 97.46 // q25.3"]
["11753303_a_at",110.98772,104.18776,103.81089,104.22289,88.389565,106.423615,0.09097195,-0.00024318695,-0.0054707527,0.00024318695,-0.23748064,0.030389786,0.6571992,0.34166893,1.0698204,0.09736862,1.0698204,"up","TMEM63A",9725,"","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from direct assay /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation","chr1:226048423-226054434 (-) // 97.25 // q42.12"]
["11747954_x_at",282.1426,243.62965,222.7455,280.14847,261.2162,255.7873,0.12633038,-0.085404396,-0.21469831,0.11609745,0.01515007,-0.015149593,0.71512985,0.41768256,-1.069268,-0.09662347,1.069268,"down","PYROXD1",79912,"0055114 // oxidation-reduction process // inferred from electronic annotation","","0016491 // oxidoreductase activity // inferred from electronic annotation","chr12:21590528-21621704 (+) // 95.89 // p12.1 /// chr11:106697101-106698748 (-) // 97.22 // q22.3"]
["11746234_a_at",276.91757,280.22293,249.3895,229.28871,233.531,194.69539,0.19844913,0.21556759,0.047393322,-0.07384205,-0.047393322,-0.3097887,0.22877915,0.039818086,1.2289941,0.29747802,1.2289941,"up","ZFP106",64397,"0008286 // insulin receptor signaling pathway // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0001515 // opioid peptide activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:42707320-42783397 (-) // 75.26 // q15.1"]
["11745038_s_at",45.222656,43.861305,40.38479,40.440247,38.767654,35.351818,0.16224384,0.1181469,-0.0009899139,0.0009899139,-0.059948444,-0.19301748,0.32099512,0.07810589,1.130629,0.17712553,1.130629,"up","FRAT1",10023,"0016055 // Wnt receptor signaling pathway // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","","chr10:99079021-99081580 (+) // 93.94 // q24.1"]
["11720283_at",214.0237,227.58342,239.20273,248.71713,234.36417,217.63734,-0.10980272,-0.021178246,0.050660133,0.10693216,0.021178246,-0.08564758,0.8319141,0.60255784,-1.0287753,-0.040927958,1.0287753,"down","JMY",133746,"0006281 // DNA repair // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from sequence or structural similarity /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from sequence or structural similarity /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0034314 // Arp2/3 complex-mediated actin nucleation // inferred from sequence or structural similarity /// 0034314 // Arp2/3 complex-mediated actin nucleation // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from sequence or structural similarity /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0070060 // 'de novo' actin filament nucleation // inferred from sequence or structural similarity /// 0070060 // 'de novo' actin filament nucleation // inferred from electronic annotation /// 0070358 // actin polymerization-dependent cell motility // inferred from sequence or structural similarity /// 0070358 // actin polymerization-dependent cell motility // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0031252 // cell leading edge // inferred from direct assay","0003713 // transcription coactivator activity // inferred from sequence or structural similarity /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr5:78531924-78623038 (+) // 95.08 // q14.1"]
["11758234_s_at",723.2388,761.1479,791.3117,624.66284,675.00354,627.9982,0.049788475,0.123493195,0.17956257,-0.16160583,-0.049788475,-0.15392303,0.116620935,0.010057803,1.1804911,0.23938715,1.1804911,"up","MED21",9412,"0001824 // blastocyst development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0016592 // mediator complex // inferred from direct assay /// 0016592 // mediator complex // inferred from electronic annotation","0003713 // transcription coactivator activity // inferred from direct assay /// 0003899 // DNA-directed RNA polymerase activity // traceable author statement","chr12:27182182-27182678 (+) // 83.08 // p11.23"]
["11725189_x_at",8.90012,8.140672,8.665204,7.377545,8.044561,7.03394,0.13724399,0.008567095,0.09865308,-0.13344002,-0.008567095,-0.20224786,0.24411705,0.045349084,1.1457082,0.19623965,1.1457082,"up","GPR126",57211,"0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement","chr6:142623055-142767401 (+) // 99.03 // q24.1"]
["11722974_a_at",679.34875,561.73285,551.3825,703.8897,640.5709,525.4886,0.1795311,-0.09473705,-0.121567726,0.23072815,0.09473705,-0.19096184,0.8976324,0.7347714,-1.0403669,-0.057092387,1.0403669,"down","WDR90",197335,"","","","chr16:699362-717830 (+) // 98.43 // p13.3"]
["11724200_a_at",17.760849,15.26396,15.498068,19.201542,16.00377,18.681555,0.07514429,-0.14342713,-0.12146807,0.18766594,-0.07514429,0.14805841,0.5528013,0.23450549,-1.1096543,-0.1501103,1.1096543,"down","PYGM",5837,"0001666 // response to hypoxia // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005977 // glycogen metabolic process // traceable author statement /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0005980 // glycogen catabolic process // traceable author statement /// 0005980 // glycogen catabolic process // inferred from electronic annotation /// 0006006 // glucose metabolic process // traceable author statement /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0051591 // response to cAMP // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016529 // sarcoplasmic reticulum // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004645 // phosphorylase activity // inferred from electronic annotation /// 0008144 // drug binding // inferred from electronic annotation /// 0008184 // glycogen phosphorylase activity // inferred from electronic annotation /// 0008184 // glycogen phosphorylase activity // traceable author statement /// 0016208 // AMP binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation","chr11:64513861-64528187 (-) // 98.03 // q13.1"]
["11751085_a_at",377.13794,345.36868,316.81003,375.8833,369.82373,404.94226,0.01653099,-0.11042404,-0.23494339,0.011723518,-0.011723518,0.11915493,0.44047683,0.14648044,-1.1090547,-0.1493305,1.1090547,"down","GBA",2629,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006665 // sphingolipid metabolic process // inferred from electronic annotation /// 0006680 // glucosylceramide catabolic process // inferred from mutant phenotype /// 0006687 // glycosphingolipid metabolic process // traceable author statement /// 0007040 // lysosome organization // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0023021 // termination of signal transduction // inferred from mutant phenotype /// 0032715 // negative regulation of interleukin-6 production // inferred from direct assay /// 0035307 // positive regulation of protein dephosphorylation // inferred from mutant phenotype /// 0043407 // negative regulation of MAP kinase activity // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0046512 // sphingosine biosynthetic process // inferred from mutant phenotype /// 0046513 // ceramide biosynthetic process // inferred from mutant phenotype /// 0050728 // negative regulation of inflammatory response // inferred by curator /// 0071356 // cellular response to tumor necrosis factor // inferred from mutant phenotype","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from sequence or structural similarity /// 0005765 // lysosomal membrane // traceable author statement /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043202 // lysosomal lumen // inferred from sequence or structural similarity /// 0043202 // lysosomal lumen // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004348 // glucosylceramidase activity // inferred from direct assay /// 0004348 // glucosylceramidase activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from sequence or structural similarity /// 0005102 // receptor binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0043169 // cation binding // inferred from electronic annotation","chr1:155204519-155211017 (-) // 99.88 // q22"]
["11723154_s_at",62.585903,57.2235,53.539112,68.23365,56.273247,49.352524,0.14130974,0.012079716,-0.083934784,0.26595592,-0.012079239,-0.2014041,0.99042434,0.9718169,1.0039314,0.005660696,1.0039314,"up","CAMTA1",23261,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr1:6845383-7829764 (+) // 97.28 // p36.31"]
["11763795_a_at",8.584593,8.072592,8.277253,8.558439,8.195137,8.489936,0.03429675,-0.054421186,-0.01830101,0.029894829,-0.032684803,0.018300772,0.8329996,0.60572284,-1.0125399,-0.017978707,1.0125399,"down","PICK1",9463,"0006200 // ATP catabolic process // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006605 // protein targeting // inferred from electronic annotation /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // non-traceable author statement /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007268 // synaptic transmission // traceable author statement /// 0015844 // monoamine transport // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0043045 // DNA methylation involved in embryo development // non-traceable author statement /// 0043046 // DNA methylation involved in gamete generation // traceable author statement /// 0043113 // receptor clustering // inferred from sequence or structural similarity /// 0043113 // receptor clustering // inferred from electronic annotation /// 0045161 // neuronal ion channel clustering // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0030666 // endocytic vesicle membrane // traceable author statement /// 0042734 // presynaptic membrane // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0045202 // synapse // inferred from sequence or structural similarity /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005080 // protein kinase C binding // inferred from sequence or structural similarity /// 0005080 // protein kinase C binding // inferred from electronic annotation /// 0005102 // receptor binding // inferred from sequence or structural similarity /// 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from sequence or structural similarity /// 0019899 // enzyme binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr22:38453401-38470948 (+) // 96.2 // q13.1"]
["11727667_at",22.833612,18.848007,20.701729,17.925085,20.66775,24.197298,0.1425929,-0.13415432,0.0011849403,-0.20658636,-0.0011849403,0.22627974,0.9944486,0.98502964,-1.0020549,-0.002961595,1.0020549,"down","DNAH7",56171,"0001539 // ciliary or flagellar motility // non-traceable author statement /// 0007018 // microtubule-based movement // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005858 // axonemal dynein complex // non-traceable author statement /// 0005874 // microtubule // inferred from electronic annotation /// 0005929 // cilium // inferred from direct assay /// 0005929 // cilium // inferred from electronic annotation /// 0030286 // dynein complex // inferred from electronic annotation /// 0035085 // cilium axoneme // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // non-traceable author statement /// 0003777 // microtubule motor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr2:196602432-196933554 (-) // 99.13 // q32.3"]
["11721026_a_at",180.29553,160.55634,149.23955,175.22293,169.83708,169.11852,0.08927059,-0.07801342,-0.1834631,0.048098564,0.0030584335,-0.0030579567,0.7137339,0.4160215,-1.052219,-0.07343505,1.052219,"down","OCEL1",79629,"","","","chr19:17337012-17340028 (+) // 82.65 // p13.11"]
["11754586_x_at",540.89996,541.88947,530.9447,726.05634,603.34576,600.8896,-0.07718754,-0.07455063,-0.103987694,0.34753227,0.08043575,0.07455063,0.2550619,0.049200624,-1.1914746,-0.25274813,1.1914746,"down","WDR82",80335,"0051568 // histone H3-K4 methylation // inferred from direct assay","0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0035097 // histone methyltransferase complex // inferred from direct assay /// 0048188 // Set1C/COMPASS complex // inferred from direct assay /// 0072357 // PTW/PP1 phosphatase complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from direct assay","chr3:52288282-52302154 (-) // 88.78 // p21.2"]
["11755263_s_at",6.5400133,8.15632,7.355908,6.8710775,6.7165294,7.2985854,-0.11478305,0.20384169,0.054826736,-0.04354024,-0.0763607,0.04354024,0.7706523,0.49850962,1.0522046,0.07341527,1.0522046,"up","HSPC072",29075,"","","","chr20:18768847-18774634 (-) // 31.16 // p11.23"]
["11756769_a_at",16.863832,18.885147,18.452328,18.86072,16.148071,19.423847,-0.14566135,0.017658234,-0.01579094,0.01579094,-0.20823193,0.05823517,0.99148506,0.97516793,-1.0022178,-0.0031960225,1.0022178,"down","IL12A",3592,"0001916 // positive regulation of T cell mediated cytotoxicity // inferred from direct assay /// 0002860 // positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target // inferred from direct assay /// 0006955 // immune response // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0009615 // response to virus // inferred from expression pattern /// 0010224 // response to UV-B // inferred from direct assay /// 0016477 // cell migration // inferred from direct assay /// 0032496 // response to lipopolysaccharide // inferred from direct assay /// 0032700 // negative regulation of interleukin-17 production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0032816 // positive regulation of natural killer cell activation // inferred from direct assay /// 0034393 // positive regulation of smooth muscle cell apoptotic process // inferred from direct assay /// 0042102 // positive regulation of T cell proliferation // inferred from electronic annotation /// 0042520 // positive regulation of tyrosine phosphorylation of Stat4 protein // inferred from direct assay /// 0042832 // defense response to protozoan // inferred from electronic annotation /// 0045785 // positive regulation of cell adhesion // inferred from direct assay /// 0045954 // positive regulation of natural killer cell mediated cytotoxicity // inferred from direct assay /// 0048662 // negative regulation of smooth muscle cell proliferation // inferred from direct assay /// 0050671 // positive regulation of lymphocyte proliferation // inferred from direct assay /// 0050830 // defense response to Gram-positive bacterium // inferred from expression pattern /// 0051135 // positive regulation of NK T cell activation // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0043514 // interleukin-12 complex // inferred from direct assay /// 0043514 // interleukin-12 complex // non-traceable author statement /// 0043514 // interleukin-12 complex // inferred from electronic annotation","0005125 // cytokine activity // inferred from direct assay /// 0005125 // cytokine activity // traceable author statement /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005143 // interleukin-12 receptor binding // non-traceable author statement /// 0005143 // interleukin-12 receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from direct assay /// 0008083 // growth factor activity // non-traceable author statement /// 0008083 // growth factor activity // inferred from electronic annotation /// 0042163 // interleukin-12 beta subunit binding // inferred from electronic annotation /// 0045513 // interleukin-27 binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from physical interaction","chr3:159706647-159713805 (+) // 86.87 // q25.33"]
["11760162_at",57.112434,44.182602,42.618286,43.775078,42.57492,38.923508,0.40301418,0.032687187,-0.01931858,0.01931858,-0.02078724,-0.15014935,0.5744972,0.25456032,1.1402369,0.18933353,1.1402369,"up","WSB1",26118,"0016310 // phosphorylation // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation","chr17:25629460-25639895 (+) // 91.82 // q11.1"]
["11732201_a_at",251.01581,232.5431,228.9235,184.92207,197.53934,201.55247,0.22476768,0.11448765,0.09185505,-0.21609306,-0.12087059,-0.09185505,0.096505746,0.0067275986,1.2197987,0.28664306,1.2197987,"up","TMEM39A",55254,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:119149700-119182529 (-) // 95.13 // q13.33"]
["11721905_a_at",926.8142,950.2544,965.9201,924.70416,997.05597,866.3861,-0.018016815,0.018016815,0.041606903,-0.021305084,0.08737755,-0.11528683,0.855109,0.64607966,1.0212059,0.03027378,1.0212059,"up","PSMA4",5685,"0000075 // cell cycle checkpoint // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from electronic annotation","0000502 // proteasome complex // traceable author statement /// 0000502 // proteasome complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005839 // proteasome core complex // inferred from electronic annotation /// 0019773 // proteasome core complex, alpha-subunit complex // inferred from electronic annotation","0004175 // endopeptidase activity // inferred from electronic annotation /// 0004298 // threonine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr15:78832746-78841546 (+) // 95.14 // q25.1"]
["11760676_at",52.487103,46.187572,50.01345,61.557224,57.20415,54.167175,-0.022727966,-0.20718622,-0.0923748,0.20723677,0.101428986,0.022727966,0.24400768,0.045301948,-1.1630348,-0.21789426,1.1630348,"down","NUPL2",11097,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006611 // protein export from nucleus // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0010827 // regulation of glucose transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0005049 // nuclear export signal receptor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:23221656-23228075 (+) // 78.52 // p15.3"]
["11748734_s_at",91.446335,72.859085,69.36471,89.67241,78.50237,78.3383,0.22169876,-0.1061182,-0.17702532,0.19343805,0.0015091896,-0.0015087128,0.81549776,0.5733075,-1.0606592,-0.08496114,1.0606592,"down","TBC1D25",4943,"0016242 // negative regulation of macroautophagy // inferred from mutant phenotype /// 0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from direct assay /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005776 // autophagic vacuole // inferred from direct assay","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008483 // transaminase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chrX:48398116-48419744 (+) // 99.85 // p11.23"]
["11762793_at",30.48655,29.996912,30.811905,24.5186,32.445545,36.16285,-0.007657528,-0.03101635,0.007657528,-0.32195377,0.08219004,0.23867798,0.98480535,0.9553336,-1.0069394,-0.009976877,1.0069394,"down","YWHAE",7531,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0001764 // neuron migration // inferred from electronic annotation /// 0006605 // protein targeting // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0021766 // hippocampus development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0035308 // negative regulation of protein dephosphorylation // inferred from electronic annotation /// 0035329 // hippo signaling cascade // traceable author statement /// 0035556 // intracellular signal transduction // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005871 // kinesin complex // inferred from electronic annotation /// 0033267 // axon part // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0050815 // phosphoserine binding // inferred from physical interaction /// 0051219 // phosphoprotein binding // inferred from physical interaction","chr17:1302126-1303500 (-) // 99.93 // p13.3"]
["11715575_x_at",1642.1409,1422.89,1336.0997,1564.3816,1463.5148,1424.4371,0.18566322,-0.021090508,-0.11188698,0.11567783,0.019522667,-0.019522667,0.94201624,0.83884805,-1.0146607,-0.020997398,1.0146607,"down","PPM1G",5496,"0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0035970 // peptidyl-threonine dephosphorylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008287 // protein serine/threonine phosphatase complex // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // inferred from direct assay /// 0004722 // protein serine/threonine phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:27604065-27632422 (-) // 49.13 // p23.3"]
["11724103_x_at",21.49514,20.314959,19.843584,44.507057,44.907333,33.74371,-0.32530403,-0.40677214,-0.44064188,0.7247195,0.73763657,0.32530403,0.05673671,0.002113484,-1.9817743,-0.9867927,1.9817743,"down","C8orf44-SGK3 /// SGK3","100533105 /// 23678","0001558 // regulation of cell growth // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006950 // response to stress // traceable author statement /// 0007154 // cell communication // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030334 // regulation of cell migration // traceable author statement /// 0042127 // regulation of cell proliferation // traceable author statement /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement","0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005246 // calcium channel regulator activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0015459 // potassium channel regulator activity // traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017080 // sodium channel regulator activity // traceable author statement /// 0017081 // chloride channel regulator activity // traceable author statement /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr8:67624652-67774257 (+) // 83.03 // q13.1"]
["11742203_x_at",36.732327,39.293503,41.5519,39.637524,38.72502,41.73279,-0.1035285,-0.0062880516,0.074335575,0.0062880516,-0.027312756,0.080602646,0.84555674,0.62814754,-1.0222062,-0.031686228,1.0222062,"down","PCDHGA11 /// PCDHGA5 /// PCDHGA7 /// PCDHGC3","5098 /// 56105 /// 56108 /// 56110","0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016339 // calcium-dependent cell-cell adhesion // non-traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr5:140800536-140892546 (+) // 100.0 // q31.3"]
["11718676_x_at",1384.2189,1371.4487,1338.9095,1228.6785,1100.9551,1043.6373,0.109989166,0.0966177,0.06197548,-0.06197548,-0.22032738,-0.29746246,0.14630704,0.016190296,1.216539,0.28278258,1.216539,"up","TMEM245",23731,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","","chr9:111777431-111882230 (-) // 82.14 // q31.3"]
["11736380_s_at",42.16192,51.30318,48.177933,47.11478,51.10627,48.40605,-0.1958394,0.08726835,-0.0034074783,-0.035600185,0.08172035,0.0034074783,0.82077765,0.5832097,-1.0380208,-0.05383542,1.0380208,"down","ZNF697",90874,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:120162044-120168767 (-) // 93.51 // p12"]
["11716547_s_at",45.6893,42.746662,45.423374,43.70593,44.73843,51.31724,0.019381523,-0.07666302,0.010960102,-0.044645786,-0.010960579,0.1869688,0.7664545,0.49255323,-1.041908,-0.05922793,1.041908,"down","TLR9",54106,"0002237 // response to molecule of bacterial origin // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007252 // I-kappaB phosphorylation // inferred from direct assay /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0030277 // maintenance of gastrointestinal epithelium // inferred from sequence or structural similarity /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0032715 // negative regulation of interleukin-6 production // inferred from sequence or structural similarity /// 0032717 // negative regulation of interleukin-8 production // inferred from direct assay /// 0032722 // positive regulation of chemokine production // inferred from direct assay /// 0032728 // positive regulation of interferon-beta production // inferred from sequence or structural similarity /// 0032733 // positive regulation of interleukin-10 production // inferred from sequence or structural similarity /// 0032735 // positive regulation of interleukin-12 production // inferred from sequence or structural similarity /// 0032741 // positive regulation of interleukin-18 production // inferred from sequence or structural similarity /// 0032755 // positive regulation of interleukin-6 production // inferred from direct assay /// 0032757 // positive regulation of interleukin-8 production // inferred from direct assay /// 0032760 // positive regulation of tumor necrosis factor production // inferred from sequence or structural similarity /// 0034122 // negative regulation of toll-like receptor signaling pathway // inferred from direct assay /// 0034123 // positive regulation of toll-like receptor signaling pathway // inferred from direct assay /// 0042346 // positive regulation of NF-kappaB import into nucleus // inferred from direct assay /// 0042742 // defense response to bacterium // non-traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from direct assay /// 0043507 // positive regulation of JUN kinase activity // inferred from direct assay /// 0045078 // positive regulation of interferon-gamma biosynthetic process // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0045356 // positive regulation of interferon-alpha biosynthetic process // inferred from direct assay /// 0045359 // positive regulation of interferon-beta biosynthetic process // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0046330 // positive regulation of JNK cascade // inferred by curator /// 0050729 // positive regulation of inflammatory response // inferred by curator /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051770 // positive regulation of nitric-oxide synthase biosynthetic process // inferred from sequence or structural similarity","0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // non-traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from sequence or structural similarity /// 0005764 // lysosome // inferred from electronic annotation /// 0005768 // endosome // inferred from sequence or structural similarity /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0016324 // apical plasma membrane // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032009 // early phagosome // inferred from sequence or structural similarity /// 0036020 // endolysosome membrane // traceable author statement /// 0045335 // phagocytic vesicle // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005149 // interleukin-1 receptor binding // inferred from physical interaction /// 0035197 // siRNA binding // inferred from mutant phenotype","chr3:52255096-52273276 (-) // 95.16 // p21.2"]
["11727286_a_at",70.517914,64.799034,69.04089,75.68646,66.3314,64.50117,0.05941868,-0.06259918,0.028879166,0.16146326,-0.028879166,-0.06924629,0.95902854,0.8830147,-1.0087345,-0.012546455,1.0087345,"down","ZNF323",64288,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:28292513-28304722 (-) // 72.72 // p22.1"]
["11738762_at",65.30007,70.80679,66.69393,57.7307,88.488945,87.71188,-0.07363701,0.04316616,-0.04316616,-0.25138283,0.36477566,0.3520503,0.72577655,0.4328652,-1.1326431,-0.17969334,1.1326431,"down","OR6Q1",219952,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:57798401-57799403 (+) // 100.0 // q12.1"]
["11720400_at",219.65617,162.15341,156.54544,210.59656,153.72295,165.84756,0.4216385,-0.01624918,-0.06702757,0.36087322,-0.093276024,0.01624918,0.97696453,0.93421674,1.0126754,0.018171817,1.0126754,"up","NCS1",23413,"0010975 // regulation of neuron projection development // inferred from sequence or structural similarity /// 0010975 // regulation of neuron projection development // inferred from electronic annotation /// 0045921 // positive regulation of exocytosis // inferred from electronic annotation /// 0048015 // phosphatidylinositol-mediated signaling // inferred from electronic annotation /// 0051927 // negative regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from sequence or structural similarity /// 0051927 // negative regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031045 // dense core granule // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005509 // calcium ion binding // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr9:132934641-132999581 (+) // 87.16 // q34.11"]
["11756540_x_at",76.48135,103.902374,87.52293,75.99091,85.97695,97.459724,-0.18169737,0.26035118,0.01285553,-0.190979,-0.01285553,0.1680007,0.9293511,0.809247,1.0298597,0.042447757,1.0298597,"up","TMPRSS5",80975,"0006508 // proteolysis // inferred from mutant phenotype /// 0006508 // proteolysis // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005044 // scavenger receptor activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from mutant phenotype /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr11:113558271-113577065 (-) // 95.05 // q23.2"]
["11756992_a_at",393.05634,389.40414,364.72324,418.77554,389.63538,380.92252,0.013039589,-0.00042819977,-0.09489441,0.10448074,0.00042819977,-0.032198906,0.6932911,0.3880817,-1.0364599,-0.05166433,1.0364599,"down","MARC2",54996,"0042126 // nitrate metabolic process // inferred from direct assay /// 0051410 // detoxification of nitrogen compound // non-traceable author statement /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005777 // peroxisome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0008940 // nitrate reductase activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0030151 // molybdenum ion binding // inferred from direct assay /// 0030151 // molybdenum ion binding // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0043546 // molybdopterin cofactor binding // inferred from direct assay","chr1:220921610-220957580 (+) // 98.74 // q41"]
["11719313_a_at",100.12133,98.73474,86.55203,91.5958,67.10484,69.05621,0.16925287,0.1491332,-0.04085684,0.04085684,-0.40800762,-0.36665344,0.36375737,0.09994767,1.2632246,0.33711118,1.2632246,"up","FAM111A",63901,"0008152 // metabolic process // inferred from electronic annotation","","0003824 // catalytic activity // inferred from electronic annotation","chr11:58910317-58922512 (+) // 78.28 // q12.1"]
["11733985_at",13.383964,13.878284,15.672103,10.261412,13.646816,12.858423,-0.014029503,0.038294315,0.21366382,-0.39730573,0.014029503,-0.07182121,0.4877012,0.1814057,1.1736553,0.23100872,1.1736553,"up","SLC5A8",160728,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation","chr12:101549278-101604185 (-) // 92.54 // q23.1"]
["11718173_a_at",17.942114,18.723919,16.088963,16.546206,18.105913,19.87984,-0.0065555573,0.05497694,-0.1638341,-0.12340498,0.0065555573,0.14140081,0.8649177,0.6664512,-1.0328672,-0.046654765,1.0328672,"down","PNKD",25953,"","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004416 // hydroxyacylglutathione hydrolase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:219135114-219211514 (+) // 83.14 // q35"]
["11735382_at",16.174294,16.85694,17.094133,17.579885,15.656628,17.338036,-0.069719315,-0.010079384,0.010079384,0.05050373,-0.116648436,0.030518532,0.94803894,0.8539449,-1.0079083,-0.011364451,1.0079083,"down","MARVELD3",91862,"0045216 // cell-cell junction organization // inferred from mutant phenotype","0005923 // tight junction // inferred from direct assay /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","","chr16:71660069-71669231 (+) // 81.29 // q22.2"]
["11724809_at",256.17435,366.68716,333.45706,266.2727,266.15955,272.1501,-0.07152748,0.44589615,0.30884743,-0.015748978,-0.01636219,0.015748978,0.5202367,0.20723103,1.1754334,0.23319279,1.1754334,"up","CBL",867,"0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // inferred from mutant phenotype /// 0016567 // protein ubiquitination // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0023051 // regulation of signaling // inferred from electronic annotation /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0048260 // positive regulation of receptor-mediated endocytosis // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016600 // flotillin complex // inferred from sequence or structural similarity /// 0016600 // flotillin complex // inferred from electronic annotation","0001784 // phosphotyrosine binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0004842 // ubiquitin-protein ligase activity // traceable author statement /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046875 // ephrin receptor binding // inferred from physical interaction /// 0046875 // ephrin receptor binding // inferred from electronic annotation","chr11:119076984-119178859 (+) // 95.88 // q23.3"]
["11761724_at",9.502265,9.443991,9.363661,9.517544,9.294358,9.967029,0.0044374466,-0.004437208,-0.016761303,0.006755352,-0.027478695,0.07332945,0.7626849,0.486939,-1.0161563,-0.02312235,1.0161563,"down","SCGB2A2",4250,"","","0005496 // steroid binding // inferred from electronic annotation","chr11:62037629-62039513 (+) // 77.86 // q12.3"]
["11749144_s_at",374.62146,360.31943,371.98376,395.06808,406.04233,405.04214,-0.038333893,-0.094491005,-0.048527718,0.038333893,0.07786274,0.07430458,0.07861495,0.0044125533,-1.0897154,-0.123951346,1.0897154,"down","ETFDH",2110,"0006810 // transport // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from sequence or structural similarity /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from direct assay /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0033539 // fatty acid beta-oxidation using acyl-CoA dehydrogenase // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031305 // integral to mitochondrial inner membrane // inferred from direct assay /// 0031966 // mitochondrial membrane // inferred from direct assay /// 0031966 // mitochondrial membrane // inferred from electronic annotation","0004174 // electron-transferring-flavoprotein dehydrogenase activity // inferred from direct assay /// 0004174 // electron-transferring-flavoprotein dehydrogenase activity // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0043783 // oxidoreductase activity, oxidizing metal ions with flavin as acceptor // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048038 // quinone binding // inferred from direct assay /// 0048039 // ubiquinone binding // inferred from direct assay /// 0050660 // flavin adenine dinucleotide binding // inferred from sequence or structural similarity /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from direct assay /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation","chr4:159602865-159629865 (+) // 91.13 // q32.1"]
["11754898_a_at",132.57828,123.32871,125.11841,148.6316,149.7353,143.01506,-0.054661274,-0.15899706,-0.1382122,0.11023569,0.12090874,0.054661274,0.08334051,0.0049770903,-1.1587415,-0.21255872,1.1587415,"down","ZNF573",126231,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:38229202-38270225 (-) // 91.64 // q13.12"]
["11736992_a_at",7.4235067,7.78568,7.9306893,6.630056,7.5844107,7.8666763,-0.049829245,0.018893003,0.045516253,-0.21290898,-0.018893003,0.033824205,0.7212312,0.42697558,1.0503372,0.070852555,1.0503372,"up","C3orf55",152078,"","","","chr3:157261034-157296674 (+) // 94.65 // q25.32"]
["11721052_at",36.152607,38.118675,51.29494,52.913975,39.567444,35.787945,-0.10330629,-0.02690792,0.40141058,0.4462428,0.02690792,-0.11793232,0.9674515,0.909281,-1.0196029,-0.028007373,1.0196029,"down","KLHDC5",57542,"","","","chr12:27932813-27955972 (+) // 90.33 // p11.22"]
["11746204_a_at",27.872799,24.801062,27.130966,25.763077,31.452784,30.12335,0.01945877,-0.1489973,-0.01945877,-0.09409428,0.19378853,0.13148308,0.5986697,0.27867624,-1.0918124,-0.12672494,1.0918124,"down","NFASC",23114,"0002175 // protein localization to paranode region of axon // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0007422 // peripheral nervous system development // inferred from sequence or structural similarity /// 0007422 // peripheral nervous system development // inferred from electronic annotation /// 0019226 // transmission of nerve impulse // inferred from electronic annotation /// 0030913 // paranodal junction assembly // inferred from electronic annotation /// 0042552 // myelination // inferred from sequence or structural similarity /// 0042552 // myelination // inferred from electronic annotation /// 0050808 // synapse organization // inferred from electronic annotation /// 0071205 // protein localization to juxtaparanode region of axon // inferred from electronic annotation","0005622 // intracellular // inferred from sequence or structural similarity /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0033010 // paranodal junction // inferred from electronic annotation /// 0033268 // node of Ranvier // inferred from sequence or structural similarity /// 0033268 // node of Ranvier // traceable author statement /// 0033268 // node of Ranvier // inferred from electronic annotation /// 0033270 // paranode region of axon // inferred from electronic annotation /// 0043194 // initial segment // inferred from sequence or structural similarity","","chr1:204797700-204946274 (+) // 98.54 // q32.1"]
["11729367_at",28.145403,21.744345,23.386656,18.35964,19.393953,21.107872,0.39368868,0.021429539,0.12647486,-0.22267294,-0.1436038,-0.021429539,0.30078033,0.06881344,1.2395071,0.3097665,1.2395071,"up","PRKAA2",5563,"0006112 // energy reserve metabolic process // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // inferred from electronic annotation /// 0006853 // carnitine shuttle // traceable author statement /// 0006914 // autophagy // inferred from electronic annotation /// 0006950 // response to stress // inferred from sequence or structural similarity /// 0006950 // response to stress // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008610 // lipid biosynthetic process // inferred from sequence or structural similarity /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0010508 // positive regulation of autophagy // inferred from sequence or structural similarity /// 0010508 // positive regulation of autophagy // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0019216 // regulation of lipid metabolic process // inferred from electronic annotation /// 0031000 // response to caffeine // inferred from electronic annotation /// 0031669 // cellular response to nutrient levels // inferred from sequence or structural similarity /// 0031669 // cellular response to nutrient levels // inferred from electronic annotation /// 0032007 // negative regulation of TOR signaling cascade // inferred from sequence or structural similarity /// 0032007 // negative regulation of TOR signaling cascade // inferred from electronic annotation /// 0035404 // histone-serine phosphorylation // inferred from sequence or structural similarity /// 0035404 // histone-serine phosphorylation // inferred from electronic annotation /// 0042149 // cellular response to glucose starvation // inferred from sequence or structural similarity /// 0042149 // cellular response to glucose starvation // inferred from electronic annotation /// 0042304 // regulation of fatty acid biosynthetic process // traceable author statement /// 0042593 // glucose homeostasis // inferred from sequence or structural similarity /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0042752 // regulation of circadian rhythm // inferred from sequence or structural similarity /// 0042752 // regulation of circadian rhythm // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from sequence or structural similarity /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045821 // positive regulation of glycolysis // inferred from sequence or structural similarity /// 0046320 // regulation of fatty acid oxidation // traceable author statement /// 0048511 // rhythmic process // inferred from electronic annotation /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0055089 // fatty acid homeostasis // inferred from sequence or structural similarity /// 0071417 // cellular response to organic nitrogen // inferred from electronic annotation /// 2000505 // regulation of energy homeostasis // inferred from sequence or structural similarity","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0031588 // AMP-activated protein kinase complex // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from sequence or structural similarity /// 0003682 // chromatin binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from sequence or structural similarity /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004679 // AMP-activated protein kinase activity // inferred from direct assay /// 0004679 // AMP-activated protein kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0030674 // protein binding, bridging // inferred from electronic annotation /// 0035174 // histone serine kinase activity // inferred from sequence or structural similarity /// 0035174 // histone serine kinase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:57110845-57181008 (+) // 89.25 // p32.2"]
["11740483_at",22.627283,22.50631,25.04513,22.586597,24.764513,28.832903,-0.06510544,-0.07283926,0.081361294,-0.06770182,0.06510544,0.28454733,0.6861676,0.37940297,-1.0813584,-0.1128448,1.0813584,"down","TNR",7143,"0007155 // cell adhesion // non-traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007158 // neuron cell-cell adhesion // inferred from electronic annotation /// 0007162 // negative regulation of cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007411 // axon guidance // non-traceable author statement /// 0008306 // associative learning // inferred from electronic annotation /// 0010977 // negative regulation of neuron projection development // inferred from electronic annotation /// 0022029 // telencephalon cell migration // inferred from electronic annotation /// 0022408 // negative regulation of cell-cell adhesion // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030517 // negative regulation of axon extension // inferred from electronic annotation /// 0035641 // locomotory exploration behavior // inferred from electronic annotation /// 0048692 // negative regulation of axon extension involved in regeneration // inferred from electronic annotation /// 0050804 // regulation of synaptic transmission // inferred from electronic annotation /// 0050805 // negative regulation of synaptic transmission // inferred from electronic annotation /// 0050808 // synapse organization // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation /// 0051968 // positive regulation of synaptic transmission, glutamatergic // inferred from electronic annotation /// 0051971 // positive regulation of transmission of nerve impulse // inferred from electronic annotation /// 0060291 // long-term synaptic potentiation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation /// 0072534 // perineuronal net // inferred from electronic annotation","0005102 // receptor binding // inferred from electronic annotation /// 0005178 // integrin binding // inferred from electronic annotation","chr1:175291877-175712906 (-) // 96.65 // q25.1"]
["11715220_s_at",125.23868,113.583885,119.53731,120.22802,112.40998,127.247856,0.06306267,-0.077858925,-0.0041561127,0.0041561127,-0.09284687,0.08602381,0.97852194,0.93820596,-1.0037699,-0.005428553,1.0037699,"down","C2orf44",80304,"","","","chr2:24252205-24270296 (-) // 99.92 // p23.3"]
["11753116_a_at",82.946724,78.150475,87.15911,75.1321,87.88066,83.88954,-0.008152962,-0.094083786,0.063313484,-0.15090895,0.07520771,0.008152962,0.9685549,0.9119402,1.0066357,0.00954162,1.0066357,"up","SOX10",6663,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0001755 // neural crest cell migration // inferred from electronic annotation /// 0002052 // positive regulation of neuroblast proliferation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007422 // peripheral nervous system development // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0014015 // positive regulation of gliogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030318 // melanocyte differentiation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048469 // cell maturation // inferred from electronic annotation /// 0048484 // enteric nervous system development // inferred from electronic annotation /// 0048546 // digestive tract morphogenesis // inferred from electronic annotation /// 0048589 // developmental growth // inferred from electronic annotation /// 0048709 // oligodendrocyte differentiation // inferred from electronic annotation /// 0048863 // stem cell differentiation // inferred from electronic annotation /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0031315 // extrinsic to mitochondrial outer membrane // inferred from electronic annotation","0000978 // RNA polymerase II core promoter proximal region sequence-specific DNA binding // inferred from electronic annotation /// 0000980 // RNA polymerase II distal enhancer sequence-specific DNA binding // inferred from electronic annotation /// 0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation","chr22:38369456-38380562 (-) // 94.53 // q13.1"]
["11727099_a_at",54.502857,36.254353,33.259842,50.46078,33.00123,37.61729,0.5615568,-0.026620865,-0.15099382,0.45038748,-0.16225529,0.026620865,0.978932,0.93934256,1.0161145,0.023062943,1.0161145,"up","NUMBL",9253,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007405 // neuroblast proliferation // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from direct assay /// 0019538 // protein metabolic process // inferred from direct assay /// 0021670 // lateral ventricle development // inferred from sequence or structural similarity /// 0021670 // lateral ventricle development // inferred from electronic annotation /// 0021849 // neuroblast division in subventricular zone // inferred from sequence or structural similarity /// 0021849 // neuroblast division in subventricular zone // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0034332 // adherens junction organization // inferred from electronic annotation /// 0050769 // positive regulation of neurogenesis // inferred from sequence or structural similarity /// 0050769 // positive regulation of neurogenesis // inferred from electronic annotation /// 0050775 // positive regulation of dendrite morphogenesis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr19:41171813-41196558 (-) // 86.81 // q13.2"]
["11723740_s_at",432.31055,462.1058,450.9471,580.0754,550.0523,549.22284,-0.22073936,-0.1245842,-0.15984917,0.20343304,0.12676144,0.1245842,0.04263758,0.0011135231,-1.2483165,-0.31998378,1.2483165,"down","WDR36",134430,"0006364 // rRNA processing // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0032040 // small-subunit processome // inferred from electronic annotation","","chr5:110427869-110466200 (+) // 82.61 // q22.1"]
["11716683_x_at",679.5203,773.21387,777.88324,563.7233,669.777,661.4939,0.010417938,0.19676876,0.20545483,-0.2591114,-0.010417938,-0.028370857,0.32791656,0.08149618,1.1784146,0.23684719,1.1784146,"up","SLC39A9",55334,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006829 // zinc ion transport // inferred from electronic annotation /// 0030001 // metal ion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0046873 // metal ion transmembrane transporter activity // inferred from electronic annotation","chr14:69865074-69929107 (+) // 97.91 // q24.1"]
["11754466_a_at",885.0351,644.91144,670.18665,801.977,649.76483,634.69696,0.42349434,-0.03313923,0.022322655,0.28132057,-0.022322655,-0.05617237,0.88912755,0.71657616,1.0496808,0.06995072,1.0496808,"up","SH3BP4",23677,"0006897 // endocytosis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr2:235887346-235964290 (+) // 99.53 // q37.2"]
["11760417_at",19.221956,17.452433,18.080486,15.957043,18.267488,16.55684,0.11382437,-0.025502682,0.025502682,-0.15473747,0.040347576,-0.10150337,0.50712955,0.19672279,1.0791578,0.109905876,1.0791578,"up","DUOXA1",90527,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr15:45409568-45422075 (-) // 87.29 // q21.1"]
["11718211_s_at",729.4913,754.6819,718.74536,636.3564,636.97253,757.8544,0.010704994,0.059682846,-0.010704994,-0.18635082,-0.18495464,0.06573486,0.5489151,0.23134556,1.0880548,0.12175119,1.0880548,"up","PYCR1",5831,"0006561 // proline biosynthetic process // inferred from direct assay /// 0006561 // proline biosynthetic process // inferred from electronic annotation /// 0006561 // proline biosynthetic process // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // traceable author statement /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0034599 // cellular response to oxidative stress // inferred from mutant phenotype /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0055129 // L-proline biosynthetic process // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004735 // pyrroline-5-carboxylate reductase activity // inferred from direct assay /// 0004735 // pyrroline-5-carboxylate reductase activity // traceable author statement /// 0004735 // pyrroline-5-carboxylate reductase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction","chr17:79890259-79894968 (-) // 90.68 // q25.3"]
["11759535_at",19.711033,16.745321,16.169455,17.533382,18.75871,17.299467,0.17858744,-0.05665779,-0.10714483,0.009688377,0.10714483,-0.009688377,0.9103378,0.76254594,-1.021569,-0.03078667,1.021569,"down","MRPS12",6183,"0006412 // translation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005761 // mitochondrial ribosome // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr19:39421187-39423802 (+) // 80.09 // q13.2"]
["11737536_a_at",14.831725,12.310869,13.257483,12.195339,12.19998,10.920433,0.2752807,0.006526947,0.113401175,-0.0070757866,-0.006526947,-0.1663754,0.38588884,0.11238783,1.1421317,0.191729,1.1421317,"up","SAMD12",401474,"","","","chr8:119390226-119634184 (-) // 77.77 // q24.12"]
["11735581_a_at",34.018536,34.296703,34.853367,31.936867,33.571327,32.933933,0.009545803,0.021294594,0.044522762,-0.081552505,-0.009545803,-0.03720045,0.24012826,0.04381769,1.0481806,0.067887284,1.0481806,"up","MBNL3",55796,"0006397 // mRNA processing // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0043484 // regulation of RNA splicing // inferred from direct assay /// 0045662 // negative regulation of myoblast differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:131513231-131573718 (-) // 100.0 // q26.2"]
["11748319_x_at",70.040726,69.139755,54.770775,82.64739,67.70825,75.11924,0.009339333,-0.009339333,-0.3454485,0.24811459,-0.039523125,0.110327244,0.5041659,0.19408268,-1.1659094,-0.2214557,1.1659094,"down","TP53",7157,"0000060 // protein import into nucleus, translocation // inferred from electronic annotation /// 0000075 // cell cycle checkpoint // traceable author statement /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // not recorded /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000733 // DNA strand renaturation // inferred from direct assay /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001836 // release of cytochrome c from mitochondria // inferred from electronic annotation /// 0002309 // T cell proliferation involved in immune response // inferred from electronic annotation /// 0002326 // B cell lineage commitment // inferred from electronic annotation /// 0002360 // T cell lineage commitment // inferred from electronic annotation /// 0006284 // base-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // inferred from mutant phenotype /// 0006302 // double-strand break repair // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006461 // protein complex assembly // inferred from direct assay /// 0006915 // apoptotic process // inferred from direct assay /// 0006915 // apoptotic process // inferred from mutant phenotype /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // inferred from electronic annotation /// 0006978 // DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator // inferred from mutant phenotype /// 0006983 // ER overload response // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007050 // cell cycle arrest // inferred from mutant phenotype /// 0007265 // Ras protein signal transduction // inferred from expression pattern /// 0007275 // multicellular organismal development // inferred from mutant phenotype /// 0007369 // gastrulation // inferred from electronic annotation /// 0007406 // negative regulation of neuroblast proliferation // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from electronic annotation /// 0007569 // cell aging // inferred from mutant phenotype /// 0007569 // cell aging // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008104 // protein localization // inferred from direct assay /// 0008156 // negative regulation of DNA replication // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008340 // determination of adult lifespan // inferred from sequence or structural similarity /// 0008340 // determination of adult lifespan // inferred from electronic annotation /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0009303 // rRNA transcription // inferred from electronic annotation /// 0009411 // response to UV // inferred from electronic annotation /// 0009792 // embryo development ending in birth or egg hatching // inferred from electronic annotation /// 0010165 // response to X-ray // not recorded /// 0010165 // response to X-ray // inferred from electronic annotation /// 0010332 // response to gamma radiation // inferred from mutant phenotype /// 0010332 // response to gamma radiation // inferred from electronic annotation /// 0030154 // cell differentiation // traceable author statement /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from direct assay /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from mutant phenotype /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0031065 // positive regulation of histone deacetylation // not recorded /// 0031065 // positive regulation of histone deacetylation // inferred from electronic annotation /// 0031571 // mitotic cell cycle G1/S transition DNA damage checkpoint // inferred from mutant phenotype /// 0031571 // mitotic cell cycle G1/S transition DNA damage checkpoint // inferred from electronic annotation /// 0032461 // positive regulation of protein oligomerization // inferred from direct assay /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0034613 // cellular protein localization // inferred from direct assay /// 0034644 // cellular response to UV // not recorded /// 0034644 // cellular response to UV // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0035690 // cellular response to drug // inferred from expression pattern /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042149 // cellular response to glucose starvation // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation /// 0042771 // DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis // inferred from direct assay /// 0042771 // DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043523 // regulation of neuron apoptotic process // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // not recorded /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046677 // response to antibiotic // inferred from expression pattern /// 0046902 // regulation of mitochondrial membrane permeability // traceable author statement /// 0046902 // regulation of mitochondrial membrane permeability // inferred from electronic annotation /// 0048147 // negative regulation of fibroblast proliferation // inferred from mutant phenotype /// 0048147 // negative regulation of fibroblast proliferation // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from sequence or structural similarity /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0051097 // negative regulation of helicase activity // traceable author statement /// 0051262 // protein tetramerization // traceable author statement /// 0051262 // protein tetramerization // inferred from electronic annotation /// 0051276 // chromosome organization // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0070245 // positive regulation of thymocyte apoptotic process // inferred from sequence or structural similarity /// 0070245 // positive regulation of thymocyte apoptotic process // inferred from electronic annotation /// 0071158 // positive regulation of cell cycle arrest // inferred from mutant phenotype /// 0071456 // cellular response to hypoxia // inferred from expression pattern /// 0071479 // cellular response to ionizing radiation // inferred from mutant phenotype /// 0071850 // mitotic cell cycle arrest // inferred from electronic annotation /// 0072332 // signal transduction by p53 class mediator resulting in induction of apoptosis // inferred from mutant phenotype /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from direct assay /// 0090343 // positive regulation of cell aging // inferred from electronic annotation /// 0090399 // replicative senescence // inferred from mutant phenotype /// 0090403 // oxidative stress-induced premature senescence // inferred from mutant phenotype /// 2000379 // positive regulation of reactive oxygen species metabolic process // inferred from mutant phenotype /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype","0000785 // chromatin // not recorded /// 0000790 // nuclear chromatin // inferred from direct assay /// 0005626 // insoluble fraction // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005657 // replication fork // not recorded /// 0005657 // replication fork // inferred from electronic annotation /// 0005669 // transcription factor TFIID complex // inferred from direct assay /// 0005678 // chromatin assembly complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // not recorded /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from direct assay /// 0016604 // nuclear body // inferred from direct assay /// 0016605 // PML body // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0000739 // DNA strand annealing activity // inferred from direct assay /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0001085 // RNA polymerase II transcription factor binding // inferred from physical interaction /// 0002020 // protease binding // inferred from physical interaction /// 0002039 // p53 binding // not recorded /// 0003677 // DNA binding // inferred from mutant phenotype /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005507 // copper ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // traceable author statement /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0035033 // histone deacetylase regulator activity // inferred from electronic annotation /// 0035035 // histone acetyltransferase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0051087 // chaperone binding // inferred from physical interaction /// 0051721 // protein phosphatase 2A binding // inferred from physical interaction /// 0070215 // MDM2 binding // inferred from electronic annotation","chr17:7576852-7579912 (-) // 85.89 // p13.1"]
["11757798_s_at",43.73129,50.328316,50.857674,45.33623,51.372463,48.199722,-0.17153168,0.031172752,0.046267986,-0.11953306,0.06079769,-0.031172752,0.9954135,0.9880378,-1.0009669,-0.0013942773,1.0009669,"down","MAFB",9935,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007379 // segment specification // inferred from electronic annotation /// 0007423 // sensory organ development // traceable author statement /// 0007585 // respiratory gaseous exchange // inferred from electronic annotation /// 0021571 // rhombomere 5 development // inferred from electronic annotation /// 0021572 // rhombomere 6 development // inferred from electronic annotation /// 0035284 // brain segmentation // inferred from electronic annotation /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0045647 // negative regulation of erythrocyte differentiation // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr20:39315595-39315960 (-) // 98.38 // q12"]
["11716029_a_at",3597.3108,3538.409,3660.2285,3506.4258,4017.1277,3734.7883,-0.012508392,-0.036325455,0.012508392,-0.049425125,0.14673805,0.041600227,0.6823884,0.373832,-1.0413196,-0.058412936,1.0413196,"down","NDUFB9",4715,"0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0006120 // mitochondrial electron transport, NADH to ubiquinone // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007605 // sensory perception of sound // traceable author statement /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation","0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement /// 0008137 // NADH dehydrogenase (ubiquinone) activity // traceable author statement","chr8:125551354-125562215 (+) // 66.99 // q24.13"]
["11756982_x_at",429.88943,370.01837,383.37817,422.88962,412.2411,413.22275,0.058761597,-0.15760708,-0.106435776,0.035077095,-0.0017156601,0.0017156601,0.6136585,0.29364172,-1.0571055,-0.08011942,1.0571055,"down","AP3S2 /// C15orf38-AP3S2","100526783 /// 10239","0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005794 // Golgi apparatus // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0008565 // protein transporter activity // inferred from electronic annotation","chr15:90377561-90437224 (-) // 79.11 // q26.1"]
["11731152_s_at",1377.1757,1389.2212,1411.5273,1427.6478,1337.2484,1313.8856,-0.0062818527,0.0062818527,0.029262543,0.045645714,-0.048727036,-0.074154854,0.7037466,0.4019518,1.0249116,0.03549954,1.0249116,"up","LOC100288963 /// MTRR","100288963 /// 4552","0006555 // methionine metabolic process // traceable author statement /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009086 // methionine biosynthetic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0005506 // iron ion binding // inferred from electronic annotation /// 0010181 // FMN binding // traceable author statement /// 0010181 // FMN binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016723 // oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor // inferred from direct assay /// 0030586 // [methionine synthase] reductase activity // traceable author statement /// 0030586 // [methionine synthase] reductase activity // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from direct assay /// 0050660 // flavin adenine dinucleotide binding // traceable author statement /// 0050661 // NADP binding // traceable author statement","chr5:7869216-7901237 (+) // 99.27 // p15.31"]
["11752980_x_at",473.7955,433.5566,397.24582,392.53314,393.07867,409.84433,0.23171043,0.103666306,-0.022521973,-0.03973961,-0.03773594,0.022521973,0.4893815,0.1828233,1.0886972,0.122602746,1.0886972,"up","ABHD12",26090,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016787 // hydrolase activity // inferred from electronic annotation /// 0047372 // acylglycerol lipase activity // inferred from electronic annotation","chr20:25281160-25371349 (-) // 99.56 // p11.21"]
["11761384_at",11.866399,17.868511,17.081274,13.824099,16.465328,20.142056,-0.49904132,0.09149599,0.026492119,-0.27873802,-0.026492119,0.26428747,0.8649177,0.66643834,-1.0817523,-0.11337019,1.0817523,"down","MPP3",4356,"0007165 // signal transduction // traceable author statement","0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay","0004385 // guanylate kinase activity // traceable author statement /// 0030165 // PDZ domain binding // inferred from electronic annotation","chr17:41892992-41910536 (-) // 99.25 // q21.31"]
["11755534_a_at",218.034,247.62302,253.55627,249.03111,278.24805,291.92636,-0.20476246,-0.021170616,0.012989998,-0.012990475,0.14705563,0.21628857,0.40130642,0.12161465,-1.1389983,-0.18776555,1.1389983,"down","ADCY7",113,"0006112 // energy reserve metabolic process // traceable author statement /// 0006171 // cAMP biosynthetic process // inferred from direct assay /// 0006171 // cAMP biosynthetic process // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway // traceable author statement /// 0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009190 // cyclic nucleotide biosynthetic process // inferred from electronic annotation /// 0030819 // positive regulation of cAMP biosynthetic process // inferred from direct assay /// 0034199 // activation of protein kinase A activity // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0071361 // cellular response to ethanol // inferred from direct assay /// 0071377 // cellular response to glucagon stimulus // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004016 // adenylate cyclase activity // inferred from direct assay /// 0004016 // adenylate cyclase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016849 // phosphorus-oxygen lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:50300461-50344439 (+) // 100.0 // q12.1"]
["11743468_at",3214.9155,3243.8196,3170.7607,3359.077,2892.0164,3196.695,0.0041007996,0.017012596,-0.015851974,0.06738472,-0.14860535,-0.004099846,0.8634598,0.66283584,1.0211494,0.030193951,1.0211494,"up","DKC1 /// SNORA56","1736 /// 677835","0000723 // telomere maintenance // traceable author statement /// 0001522 // pseudouridine synthesis // inferred from electronic annotation /// 0006364 // rRNA processing // inferred from electronic annotation /// 0006364 // rRNA processing // traceable author statement /// 0006396 // RNA processing // traceable author statement /// 0006396 // RNA processing // inferred from electronic annotation /// 0007004 // telomere maintenance via telomerase // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0009451 // RNA modification // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005697 // telomerase holoenzyme complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015030 // Cajal body // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003720 // telomerase activity // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0009982 // pseudouridine synthase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation","chrX:153991013-154005959 (+) // 95.17 // q28"]
["11718574_at",512.5486,562.4578,611.1435,667.0138,884.0458,803.5552,-0.31692505,-0.18286896,-0.06310272,0.06310272,0.46950722,0.3317833,0.19005562,0.027351683,-1.3906538,-0.47576335,1.3906538,"down","SERBP1",26135,"0043488 // regulation of mRNA stability // non-traceable author statement /// 0045767 // regulation of anti-apoptosis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr1:67873494-67896452 (-) // 83.45 // p31.3"]
["11750463_a_at",41.79165,40.446583,38.954308,46.658062,42.516045,58.6734,-0.012396336,-0.0595932,-0.11382818,0.14651537,0.012396336,0.4770956,0.4057314,0.1242863,-1.2091068,-0.2739417,1.2091068,"down","CLEC4M",10332,"0006897 // endocytosis // inferred from electronic annotation /// 0007159 // leukocyte cell-cell adhesion // non-traceable author statement /// 0009988 // cell-cell recognition // traceable author statement /// 0019048 // virus-host interaction // traceable author statement /// 0019062 // viral attachment to host cell // traceable author statement /// 0019079 // viral genome replication // non-traceable author statement /// 0019882 // antigen processing and presentation // non-traceable author statement /// 0035556 // intracellular signal transduction // non-traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation /// 0046795 // intracellular virion transport // traceable author statement /// 0046968 // peptide antigen transport // non-traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005622 // intracellular // traceable author statement /// 0005737 // cytoplasm // non-traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // non-traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005537 // mannose binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // non-traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0030369 // ICAM-3 receptor activity // non-traceable author statement /// 0042605 // peptide antigen binding // non-traceable author statement /// 0046790 // virion binding // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:7828129-7833874 (+) // 95.45 // p13.2"]
["11750057_a_at",170.55621,200.44879,188.0939,163.48247,165.70894,182.64801,-0.04940939,0.18357801,0.091796875,-0.110519886,-0.09100485,0.049409866,0.5238356,0.20982058,1.0912842,0.12602681,1.0912842,"up","SPSB3",90864,"0016567 // protein ubiquitination // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr16:1828064-1831498 (-) // 94.88 // p13.3"]
["11744305_a_at",47.106888,41.09577,50.315144,52.419662,45.26529,52.022408,-0.047527313,-0.24447536,0.047527313,0.10664272,-0.1050601,0.09566784,0.6709009,0.35942668,-1.0821561,-0.11390857,1.0821561,"down","LRRK1",79705,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:101459419-101610317 (+) // 96.93 // q26.3"]
["11744844_a_at",38.075626,38.09393,44.12653,43.306923,42.41284,39.06265,-0.096277714,-0.09558439,0.116500854,0.08945227,0.059355736,-0.059355736,0.8018465,0.54937387,-1.0388143,-0.054937787,1.0388143,"down","GON4L",54856,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation","chr1:155722633-155746250 (-) // 92.08 // q22"]
["11732552_a_at",9.51378,10.212355,10.133538,10.270512,11.046983,10.36661,-0.10632086,-0.0040962696,-0.015273571,0.0040962696,0.10924077,0.017532349,0.42747837,0.13816565,-1.0610701,-0.08551995,1.0610701,"down","ENKUR",219670,"","0005929 // cilium // inferred from electronic annotation /// 0019861 // flagellum // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005516 // calmodulin binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation","chr10:25270913-25305085 (-) // 75.02 // p12.1"]
["11761186_at",12.96823,18.432627,18.17466,15.655034,14.859004,16.597988,-0.31383562,0.19344425,0.17311096,-0.04219079,-0.11748004,0.04219103,0.9086946,0.75820655,1.0401078,0.056733124,1.0401078,"up","DDX31",64794,"","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr9:135535749-135545403 (-) // 98.02 // q34.13"]
["11731147_at",15.149005,19.899082,19.041388,17.66591,17.051687,20.783504,-0.27583027,0.1176486,0.054085255,-0.054085255,-0.10513878,0.18038559,0.9235288,0.79498434,-1.0293636,-0.04175272,1.0293636,"down","TLR7",51284,"0002224 // toll-like receptor signaling pathway // inferred from electronic annotation /// 0002282 // microglial cell activation involved in immune response // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007252 // I-kappaB phosphorylation // inferred from direct assay /// 0032722 // positive regulation of chemokine production // inferred from direct assay /// 0032755 // positive regulation of interleukin-6 production // inferred from electronic annotation /// 0032757 // positive regulation of interleukin-8 production // inferred from direct assay /// 0034154 // toll-like receptor 7 signaling pathway // inferred from electronic annotation /// 0042221 // response to chemical stimulus // inferred from electronic annotation /// 0042346 // positive regulation of NF-kappaB import into nucleus // inferred from direct assay /// 0045078 // positive regulation of interferon-gamma biosynthetic process // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0045356 // positive regulation of interferon-alpha biosynthetic process // inferred from direct assay /// 0045356 // positive regulation of interferon-alpha biosynthetic process // inferred from electronic annotation /// 0045359 // positive regulation of interferon-beta biosynthetic process // inferred from direct assay /// 0045416 // positive regulation of interleukin-8 biosynthetic process // inferred from mutant phenotype /// 0050729 // positive regulation of inflammatory response // inferred by curator /// 0051607 // defense response to virus // inferred from mutant phenotype /// 0051607 // defense response to virus // inferred from electronic annotation /// 0052033 // pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern","0000139 // Golgi membrane // traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005764 // lysosome // inferred from sequence or structural similarity /// 0005764 // lysosome // inferred from electronic annotation /// 0005768 // endosome // inferred from sequence or structural similarity /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032009 // early phagosome // inferred from sequence or structural similarity /// 0032009 // early phagosome // inferred from electronic annotation /// 0036020 // endolysosome membrane // traceable author statement /// 0045335 // phagocytic vesicle // inferred from electronic annotation","0003725 // double-stranded RNA binding // inferred from direct assay /// 0003727 // single-stranded RNA binding // inferred from sequence or structural similarity /// 0003727 // single-stranded RNA binding // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0008144 // drug binding // inferred from electronic annotation /// 0035197 // siRNA binding // inferred from sequence or structural similarity /// 0035197 // siRNA binding // inferred from electronic annotation","chrX:12885115-12908480 (+) // 93.51 // p22.2"]
["11755706_a_at",879.71844,1027.793,1039.6622,792.4136,893.6163,821.3641,-0.011306763,0.21312904,0.22969437,-0.16209507,0.011306763,-0.11032677,0.29986832,0.068366766,1.1735483,0.23087727,1.1735483,"up","BBX",56987,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr3:107429296-107491917 (+) // 82.37 // q13.12"]
["11716548_x_at",87.713974,75.83064,70.45527,52.954475,53.045113,51.697933,0.5208421,0.31081724,0.20474386,-0.2072115,-0.20474434,-0.24185753,0.074770756,0.0038445531,1.4777534,0.5634055,1.4777534,"up","FGFR1",2260,"0000165 // MAPK cascade // traceable author statement /// 0001501 // skeletal system development // traceable author statement /// 0001764 // neuron migration // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from genetic interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from physical interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0010518 // positive regulation of phospholipase activity // traceable author statement /// 0010863 // positive regulation of phospholipase C activity // inferred from direct assay /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // traceable author statement /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0043009 // chordate embryonic development // traceable author statement /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0043410 // positive regulation of MAPK cascade // inferred from mutant phenotype /// 0045595 // regulation of cell differentiation // traceable author statement /// 0045666 // positive regulation of neuron differentiation // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048705 // skeletal system morphogenesis // traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from direct assay /// 0005007 // fibroblast growth factor-activated receptor activity // traceable author statement /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from direct assay /// 0008201 // heparin binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017134 // fibroblast growth factor binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction","chr8:38267736-38326352 (-) // 88.37 // p11.23"]
["11755506_a_at",567.536,624.7289,682.61053,1089.8583,816.647,675.20215,-0.25847912,-0.119960785,0.007871628,0.68287754,0.26652145,-0.007871628,0.38478947,0.11170151,-1.3541291,-0.43736526,1.3541291,"down","PICALM",8301,"0006461 // protein complex assembly // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // inferred from direct assay /// 0006898 // receptor-mediated endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // inferred from sequence or structural similarity /// 0007409 // axonogenesis // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // traceable author statement /// 0016197 // endosomal transport // inferred from mutant phenotype /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0030100 // regulation of endocytosis // inferred from mutant phenotype /// 0031623 // receptor internalization // inferred from mutant phenotype /// 0032880 // regulation of protein localization // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0048261 // negative regulation of receptor-mediated endocytosis // inferred from direct assay /// 0048268 // clathrin coat assembly // inferred from mutant phenotype /// 0048268 // clathrin coat assembly // inferred from electronic annotation /// 0048813 // dendrite morphogenesis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005905 // coated pit // inferred from direct assay /// 0005905 // coated pit // inferred from electronic annotation /// 0005905 // coated pit // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0030118 // clathrin coat // inferred from electronic annotation /// 0030122 // AP-2 adaptor complex // inferred from direct assay /// 0030132 // clathrin coat of coated pit // inferred from direct assay /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042734 // presynaptic membrane // inferred from sequence or structural similarity /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0045211 // postsynaptic membrane // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0005545 // 1-phosphatidylinositol binding // inferred from sequence or structural similarity /// 0005545 // 1-phosphatidylinositol binding // inferred from electronic annotation /// 0030276 // clathrin binding // inferred from direct assay /// 0030276 // clathrin binding // inferred from electronic annotation /// 0030276 // clathrin binding // inferred from sequence or structural similarity /// 0032050 // clathrin heavy chain binding // inferred from direct assay","chr11:85669642-85693032 (-) // 93.19 // q14.2"]
["11727092_x_at",648.7155,558.16394,624.7413,932.0155,749.8454,606.1785,0.027163506,-0.1897335,-0.027163506,0.5499315,0.23617077,-0.070679665,0.49710876,0.18866484,-1.232612,-0.30171874,1.232612,"down","IL18",3606,"0000165 // MAPK cascade // inferred from mutant phenotype /// 0001525 // angiogenesis // inferred from direct assay /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from direct assay /// 0006955 // immune response // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0009314 // response to radiation // inferred from electronic annotation /// 0009409 // response to cold // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0030155 // regulation of cell adhesion // inferred from direct assay /// 0030324 // lung development // inferred from electronic annotation /// 0030431 // sleep // inferred from sequence or structural similarity /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from direct assay /// 0032722 // positive regulation of chemokine production // inferred from electronic annotation /// 0032725 // positive regulation of granulocyte macrophage colony-stimulating factor production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0032731 // positive regulation of interleukin-1 beta production // inferred from electronic annotation /// 0032740 // positive regulation of interleukin-17 production // inferred from direct assay /// 0032757 // positive regulation of interleukin-8 production // inferred from electronic annotation /// 0032760 // positive regulation of tumor necrosis factor production // inferred from electronic annotation /// 0032819 // positive regulation of natural killer cell proliferation // inferred from direct assay /// 0032930 // positive regulation of superoxide anion generation // inferred from electronic annotation /// 0032967 // positive regulation of collagen biosynthetic process // inferred from electronic annotation /// 0034105 // positive regulation of tissue remodeling // inferred by curator /// 0042033 // chemokine biosynthetic process // traceable author statement /// 0042088 // T-helper 1 type immune response // inferred from direct assay /// 0042092 // type 2 immune response // traceable author statement /// 0042094 // interleukin-2 biosynthetic process // traceable author statement /// 0042095 // interferon-gamma biosynthetic process // traceable author statement /// 0042095 // interferon-gamma biosynthetic process // inferred from electronic annotation /// 0042104 // positive regulation of activated T cell proliferation // inferred from direct assay /// 0042231 // interleukin-13 biosynthetic process // traceable author statement /// 0042253 // granulocyte macrophage colony-stimulating factor biosynthetic process // traceable author statement /// 0043117 // positive regulation of vascular permeability // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0048546 // digestive tract morphogenesis // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred by curator /// 0050966 // detection of mechanical stimulus involved in sensory perception of pain // inferred from electronic annotation /// 0051142 // positive regulation of NK T cell proliferation // inferred from direct assay /// 0055093 // response to hyperoxia // inferred from electronic annotation /// 0060312 // regulation of blood vessel remodeling // inferred from electronic annotation /// 0070301 // cellular response to hydrogen peroxide // inferred from electronic annotation /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from electronic annotation /// 0071320 // cellular response to cAMP // inferred from electronic annotation /// 0071346 // cellular response to interferon-gamma // inferred from electronic annotation /// 0071356 // cellular response to tumor necrosis factor // inferred from electronic annotation /// 0071374 // cellular response to parathyroid hormone stimulus // inferred from electronic annotation /// 0071375 // cellular response to peptide hormone stimulus // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from direct assay /// 2000256 // positive regulation of male germ cell proliferation // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016324 // apical plasma membrane // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0005125 // cytokine activity // traceable author statement","chr11:112013973-112034840 (-) // 70.23 // q23.1"]
["11739992_at",10.380187,10.42709,10.156146,11.12508,10.657068,10.378787,-0.0032520294,0.0032520294,-0.034731388,0.09673166,0.03472638,-0.0034463406,0.45820844,0.15972129,-1.0383176,-0.054247748,1.0383176,"down","PDZD7",79955,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005929 // cilium // inferred from direct assay /// 0005929 // cilium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr10:102777089-102790901 (-) // 86.57 // q24.31"]
["11726243_a_at",15.065668,18.202164,16.863838,18.380981,15.539977,16.757812,-0.15811872,0.11472654,0.0045495033,0.12883043,-0.11339903,-0.0045495033,0.95902854,0.8830637,-1.0115551,-0.01657487,1.0115551,"down","ANKDD1A",348094,"0007165 // signal transduction // inferred from electronic annotation","","","chr15:65204100-65603681 (+) // 70.35 // q22.31"]
["11722121_a_at",382.3974,303.14438,313.74164,382.0644,313.774,279.2582,0.28542137,-0.049646378,-7.43866e-5,0.28416443,7.43866e-5,-0.16805172,0.9361358,0.82448834,1.0279983,0.03983792,1.0279983,"up","PC",5091,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006090 // pyruvate metabolic process // inferred from electronic annotation /// 0006094 // gluconeogenesis // inferred from electronic annotation /// 0006094 // gluconeogenesis // traceable author statement /// 0006107 // oxaloacetate metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005625 // soluble fraction // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004075 // biotin carboxylase activity // inferred from electronic annotation /// 0004736 // pyruvate carboxylase activity // traceable author statement /// 0004736 // pyruvate carboxylase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // traceable author statement /// 0009374 // biotin binding // inferred from electronic annotation /// 0009374 // biotin binding // traceable author statement /// 0016874 // ligase activity // inferred from electronic annotation /// 0031406 // carboxylic acid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:66615703-66725815 (-) // 94.37 // q13.2"]
["11743919_a_at",595.3893,561.3928,519.5357,504.15787,529.76636,510.55585,0.18254375,0.0977211,-0.014066696,-0.057414055,0.014066696,-0.03922081,0.4126077,0.12862155,1.0839179,0.116255425,1.0839179,"up","MAP3K7",6885,"0000165 // MAPK cascade // inferred from electronic annotation /// 0000186 // activation of MAPKK activity // inferred from direct assay /// 0000186 // activation of MAPKK activity // traceable author statement /// 0000186 // activation of MAPKK activity // inferred from electronic annotation /// 0000187 // activation of MAPK activity // inferred from direct assay /// 0000187 // activation of MAPK activity // traceable author statement /// 0000187 // activation of MAPK activity // inferred from electronic annotation /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001841 // neural tube formation // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002726 // positive regulation of T cell cytokine production // inferred from mutant phenotype /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0007250 // activation of NF-kappaB-inducing kinase activity // inferred from mutant phenotype /// 0007252 // I-kappaB phosphorylation // inferred from direct assay /// 0007254 // JNK cascade // inferred from direct assay /// 0007254 // JNK cascade // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032743 // positive regulation of interleukin-2 production // inferred from mutant phenotype /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype /// 0043507 // positive regulation of JUN kinase activity // inferred from direct assay /// 0043507 // positive regulation of JUN kinase activity // inferred from mutant phenotype /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0050852 // T cell receptor signaling pathway // non-traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0050870 // positive regulation of T cell activation // inferred by curator /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // inferred from direct assay /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement","0005671 // Ada2/Gcn5/Ada3 transcription activator complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0008385 // IkappaB kinase complex // inferred from physical interaction /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004708 // MAP kinase kinase activity // inferred from electronic annotation /// 0004709 // MAP kinase kinase kinase activity // inferred from direct assay /// 0004709 // MAP kinase kinase kinase activity // inferred from electronic annotation /// 0004709 // MAP kinase kinase kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:91225352-91297020 (-) // 99.7 // q15"]
["11730232_s_at",126.68214,113.76125,108.080635,115.97084,107.87614,94.88471,0.19215488,0.03695059,-0.03695011,0.06470394,-0.039682865,-0.22481108,0.61411375,0.2940568,1.0947857,0.13064848,1.0947857,"up","TIAL1",7073,"0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0006952 // defense response // traceable author statement","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // traceable author statement /// 0010494 // cytoplasmic stress granule // inferred from sequence or structural similarity","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement","chr10:121332837-121356540 (-) // 93.82 // q26.11"]
["11728597_a_at",50.088257,48.544178,54.87373,64.900314,54.665844,58.175297,-0.12890577,-0.1740799,0.002737999,0.2448473,-0.002737999,0.0870285,0.32397598,0.07952645,-1.156524,-0.20979513,1.156524,"down","ZNF222",7673,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:44529493-44537263 (+) // 92.27 // q13.31"]
["11754321_x_at",387.16803,400.9318,387.9761,413.22275,406.38953,435.90356,-0.060150146,-0.009753227,-0.057142258,0.033809662,0.009753227,0.11089897,0.2655721,0.053417582,-1.0672039,-0.093835816,1.0672039,"down","SLC12A9",56996,"0006810 // transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0015377 // cation:chloride symporter activity // traceable author statement","chr7:100456357-100464632 (+) // 91.95 // q22.1"]
["11734047_s_at",16.505835,15.663804,12.409405,12.668702,13.299005,14.128922,0.2679913,0.19244981,-0.14355111,-0.113716125,-0.0436666,0.0436666,0.66067004,0.3457888,1.1046087,0.14353533,1.1046087,"up","SDR16C5",195814,"0008152 // metabolic process // inferred from electronic annotation /// 0042572 // retinol metabolic process // inferred from direct assay /// 0042572 // retinol metabolic process // inferred from electronic annotation /// 0042574 // retinal metabolic process // inferred from direct assay /// 0043616 // keratinocyte proliferation // inferred from mutant phenotype /// 0050908 // detection of light stimulus involved in visual perception // non-traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004745 // retinol dehydrogenase activity // inferred from direct assay /// 0004745 // retinol dehydrogenase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation","chr8:57212207-57233241 (-) // 94.25 // q12.1"]
["11756139_s_at",703.3046,657.70667,638.4133,693.66626,679.21716,704.0512,0.035092354,-0.061613083,-0.104566574,0.0151844025,-0.0151844025,0.036623,0.5920958,0.27229205,-1.0395099,-0.055903487,1.0395099,"down","LOC728554 /// THOC3","728554 /// 84321","0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0046784 // intronless viral mRNA export from host nucleus // inferred from direct assay /// 0051028 // mRNA transport // inferred from electronic annotation","0000346 // transcription export complex // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation","chr5:177302533-177311269 (+) // 95.89 // q35.3 /// chr5:175386533-175395273 (-) // 96.02 // q35.2"]
["11738248_a_at",112.644295,99.358536,100.699585,99.889595,91.377846,91.493805,0.17721319,-0.0038452148,0.015496731,0.0038452148,-0.12464476,-0.12281513,0.38789502,0.11376526,1.1050869,0.14415985,1.1050869,"up","C11orf71",54494,"","","","chr11:114270710-114271139 (-) // 48.15 // q23.2"]
["11762283_x_at",32.352276,27.686476,27.44463,24.08637,20.960285,21.627512,0.33149672,0.10681105,0.094153404,-0.094153404,-0.29471207,-0.24950266,0.1476266,0.016447587,1.3106445,0.39027643,1.3106445,"up","TMX3",54495,"0006662 // glycerol ether metabolic process // inferred from electronic annotation /// 0045454 // cell redox homeostasis // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003756 // protein disulfide isomerase activity // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0015035 // protein disulfide oxidoreductase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation","chr18:66364175-66382295 (-) // 88.02 // q22.1"]
["11734921_a_at",68.29367,63.048943,59.2836,69.03976,68.526245,73.47048,-0.0024528503,-0.11773205,-0.2065711,0.013223171,0.0024523735,0.10296011,0.34837246,0.09146513,-1.1083887,-0.14846386,1.1083887,"down","ZNF276",92822,"0006281 // DNA repair // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006461 // protein complex assembly // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007140 // male meiosis // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0008585 // female gonad development // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0043240 // Fanconi anaemia nuclear complex // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:89787394-89807330 (+) // 89.68 // q24.3"]
["11735254_at",91.889565,91.19066,95.55882,90.69287,99.75755,106.54282,-0.028244019,-0.039259434,0.028244019,-0.047155857,0.09028101,0.18521643,0.5953574,0.2751577,-1.0637804,-0.0892004,1.0637804,"down","NEK8",284086,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0072372 // primary cilium // inferred from sequence or structural similarity /// 0072372 // primary cilium // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:27055807-27069784 (+) // 86.08 // q11.2"]
["11739085_a_at",1180.9978,997.0388,908.4509,870.48206,711.7818,690.0364,0.40932274,0.16503811,0.030797005,-0.030797005,-0.32117653,-0.36593914,0.24224067,0.04463109,1.3575671,0.44102347,1.3575671,"up","PCID2",55795,"0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043488 // regulation of mRNA stability // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0048536 // spleen development // inferred from sequence or structural similarity /// 0090267 // positive regulation of mitotic cell cycle spindle assembly checkpoint // inferred from mutant phenotype /// 2000117 // negative regulation of cysteine-type endopeptidase activity // inferred from mutant phenotype","","","chr13:113831924-113863025 (-) // 91.72 // q34"]
["11732111_a_at",249.71324,214.17966,233.22299,199.72293,168.8896,161.03731,0.27186108,0.05041027,0.17329836,-0.050410748,-0.29233074,-0.36101627,0.18092789,0.024684139,1.3193029,0.39977583,1.3193029,"up","TNFRSF21",27242,"0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051402 // neuron apoptotic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:47199268-47277680 (-) // 92.51 // p12.3"]
["11741462_a_at",1608.206,1565.0612,1582.2239,1519.7238,1440.211,1444.745,0.060438156,0.021204948,0.03693962,-0.021204948,-0.0987339,-0.09419918,0.14486714,0.015860425,1.0799068,0.11090683,1.0799068,"up","PRKAG1",5571,"0006110 // regulation of glycolysis // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007283 // spermatogenesis // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // traceable author statement /// 0046320 // regulation of fatty acid oxidation // traceable author statement /// 0050790 // regulation of catalytic activity // inferred from electronic annotation /// 0051291 // protein heterooligomerization // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0031588 // AMP-activated protein kinase complex // inferred from sequence or structural similarity /// 0031588 // AMP-activated protein kinase complex // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004679 // AMP-activated protein kinase activity // inferred from sequence or structural similarity /// 0004691 // cAMP-dependent protein kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation /// 0008603 // cAMP-dependent protein kinase regulator activity // traceable author statement /// 0016208 // AMP binding // inferred from sequence or structural similarity /// 0016208 // AMP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from direct assay /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0043531 // ADP binding // inferred from sequence or structural similarity","chr12:49396131-49412531 (-) // 90.1 // q13.12"]
["11724872_a_at",68.73061,77.889565,78.79638,53.856926,42.82189,48.56353,0.17591,0.35638762,0.37308693,-0.17591047,-0.50669384,-0.3251691,0.08453397,0.0051067793,1.5558677,0.63771933,1.5558677,"up","CLDN2",9075,"0016338 // calcium-independent cell-cell adhesion // inferred from sequence or structural similarity /// 0016338 // calcium-independent cell-cell adhesion // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from sequence or structural similarity /// 0042802 // identical protein binding // inferred from electronic annotation","chrX:106163633-106174091 (+) // 84.73 // q22.3"]
["11718840_s_at",957.6158,907.1158,913.47614,906.6278,914.95917,825.3689,0.07312012,-0.0050401688,0.0050401688,-0.0058164597,0.0073804855,-0.1412878,0.575132,0.2552727,1.0504067,0.07094801,1.0504067,"up","PDHX",8050,"0006090 // pyruvate metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0010510 // regulation of acetyl-CoA biosynthetic process from pyruvate // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation","chr11:34937676-35017675 (+) // 98.17 // p13"]
["11736536_a_at",30.973969,35.297947,40.492836,32.1588,40.062077,34.75877,-0.17742443,0.01110363,0.20918608,-0.123267174,0.19375658,-0.01110363,0.99042434,0.97155684,-1.0038244,-0.005506852,1.0038244,"down","LEAP2",116842,"0042742 // defense response to bacterium // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","","chr5:132206869-132210700 (+) // 94.66 // q31.1"]
["11720645_at",209.12938,226.20612,239.01828,180.89864,194.32957,219.07527,-0.033515453,0.07972717,0.15920973,-0.24272966,-0.13940573,0.033515453,0.41944182,0.13284235,1.1365652,0.18468046,1.1365652,"up","SPTLC2",9517,"0006665 // sphingolipid metabolic process // traceable author statement /// 0006665 // sphingolipid metabolic process // inferred from electronic annotation /// 0006686 // sphingomyelin biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046511 // sphinganine biosynthetic process // inferred from electronic annotation /// 0046512 // sphingosine biosynthetic process // inferred from electronic annotation /// 0046513 // ceramide biosynthetic process // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0017059 // serine C-palmitoyltransferase complex // inferred from direct assay","0003824 // catalytic activity // inferred from electronic annotation /// 0004758 // serine C-palmitoyltransferase activity // inferred from direct assay /// 0004758 // serine C-palmitoyltransferase activity // inferred from electronic annotation /// 0004758 // serine C-palmitoyltransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation","chr14:77972340-78083116 (-) // 87.95 // q24.3"]
["11744080_x_at",13.161945,14.39828,16.85368,14.541233,14.813255,20.09196,-0.15714669,-0.0276227,0.19954443,-0.01336956,0.013369322,0.45309925,0.75192326,0.47088385,-1.1065801,-0.14610793,1.1065801,"down","PRSS1 /// PRSS2 /// PRSS3P2","154754 /// 5644 /// 5645","0006508 // proteolysis // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0007586 // digestion // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // traceable author statement /// 0030198 // extracellular matrix organization // traceable author statement /// 0030307 // positive regulation of cell growth // traceable author statement /// 0030574 // collagen catabolic process // inferred from direct assay /// 0030574 // collagen catabolic process // inferred from mutant phenotype /// 0045087 // innate immune response // traceable author statement /// 0045785 // positive regulation of cell adhesion // traceable author statement","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from mutant phenotype /// 0005615 // extracellular space // inferred from electronic annotation /// 0031012 // extracellular matrix // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from direct assay /// 0004252 // serine-type endopeptidase activity // traceable author statement /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:142456512-142482415 (+) // 83.87 // q34"]
["11745848_a_at",404.82907,368.1561,368.3474,341.65967,299.7261,314.64322,0.1908741,0.053878784,0.054628372,-0.053878784,-0.24279404,-0.17272186,0.17485249,0.023097733,1.1943773,0.25625867,1.1943773,"up","TJP2",9414,"0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0035329 // hippo signaling cascade // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0005923 // tight junction // inferred from direct assay /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation","0004385 // guanylate kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr9:71819713-71869646 (+) // 99.79 // q21.11"]
["11762322_at",24.165154,27.56214,27.596186,26.29436,26.925215,27.218466,-0.16384363,0.0259161,0.027697086,-0.042018414,-0.0078139305,0.0078139305,0.90288776,0.74499696,-1.0158851,-0.022737259,1.0158851,"down","APOL4",80832,"0006629 // lipid metabolic process // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0042157 // lipoprotein metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from sequence or structural similarity","0008289 // lipid binding // inferred from electronic annotation","chr22:36593501-36600789 (-) // 60.98 // q12.3"]
["11757247_s_at",25.86665,26.19917,26.619291,29.350056,30.515734,30.623602,-0.11182451,-0.09339666,-0.07044554,0.07044554,0.12663555,0.13172626,0.039552536,0.0009349659,-1.1498864,-0.2014913,1.1498864,"down","OR6W1P",89883,"","","","chr7:142759380-142760882 (-) // 90.75 // q34"]
["11729868_x_at",10.663273,12.722515,11.561538,10.773946,13.348277,13.310684,-0.18570828,0.06902552,-0.06902528,-0.17081165,0.13829517,0.13422632,0.7644151,0.48967755,-1.0686623,-0.09580601,1.0686623,"down","UGT3A1",133688,"0008152 // metabolic process // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0015020 // glucuronosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016758 // transferase activity, transferring hexosyl groups // inferred from electronic annotation","chr5:35953191-35991499 (-) // 93.03 // p13.2"]
["11718835_x_at",199.6696,122.97682,120.309944,166.99425,136.62431,122.25124,0.62331486,-0.075913906,-0.107543945,0.36549807,0.075913906,-0.0844512,0.9732362,0.9240966,1.0193377,0.02763202,1.0193377,"up","PELP1",27043,"0006351 // transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0071339 // MLL1 complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr17:4574678-4607632 (-) // 92.21 // p13.2"]
["11746193_a_at",250.59262,203.18019,230.58653,284.35876,271.70016,248.53644,0.0059432983,-0.29664087,-0.11409235,0.18831158,0.12261486,-0.005943775,0.3393812,0.08701131,-1.1782053,-0.23659089,1.1782053,"down","METTL3",56339,"0001510 // RNA methylation // inferred from mutant phenotype /// 0001510 // RNA methylation // inferred from electronic annotation /// 0006139 // nucleobase-containing compound metabolic process // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0032259 // methylation // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016422 // mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity // inferred from mutant phenotype /// 0016422 // mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr14:21966305-21979482 (-) // 99.51 // q11.2"]
["11720655_s_at",886.9033,958.979,953.6663,853.90186,972.2222,873.3149,-0.05235386,0.060368538,0.05235386,-0.10706043,0.08015537,-0.07462883,0.75346637,0.47321662,1.0381159,0.053967465,1.0381159,"up","BBX",56987,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr3:107241782-107530171 (+) // 98.21 // q13.12"]
["11760997_at",16.333109,15.316609,18.968628,18.42865,17.650957,16.333109,-0.05597353,-0.14867592,0.15984249,0.118177414,0.05597353,-0.05597353,0.8470902,0.631025,-1.0383754,-0.05432808,1.0383754,"down","ARHGAP27",201176,"0006897 // endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // inferred from sequence or structural similarity /// 0007165 // signal transduction // inferred from electronic annotation /// 0032855 // positive regulation of Rac GTPase activity // inferred from sequence or structural similarity /// 0043089 // positive regulation of Cdc42 GTPase activity // inferred from sequence or structural similarity /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from sequence or structural similarity /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from sequence or structural similarity /// 0030675 // Rac GTPase activator activity // inferred from sequence or structural similarity","chr17:43474753-43487765 (-) // 77.9 // q21.31"]
["11732850_x_at",252.94574,272.73468,277.3895,278.82214,254.36478,246.61348,-0.05837059,0.050299644,0.07471466,0.082146645,-0.050299644,-0.09494734,0.8044757,0.5542659,1.030431,0.043247946,1.030431,"up","CTAGE15P /// CTAGE4 /// CTAGE6P /// CTAGE8 /// CTAGE9","100128553 /// 100142659 /// 340307 /// 441294 /// 643854","","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr7:143880361-143883171 (+) // 98.87 // q35 /// chr7:143268675-143271467 (+) // 96.82 // q35 /// chr6:132029582-132032392 (-) // 99.29 // q23.2 /// chr7:143963768-143966578 (-) // 98.76 // q35 /// chr7:143452194-143454986 (-) // 96.68 // q35"]
["11716284_s_at",2767.3474,2804.4307,2866.1143,2694.6277,2538.9287,2593.185,0.019208908,0.038413048,0.06980133,-0.019208908,-0.10507488,-0.0745697,0.16328594,0.020250974,1.0783002,0.108758934,1.0783002,"up","GLO1",2739,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // non-traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006749 // glutathione metabolic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from direct assay /// 0006916 // anti-apoptosis // inferred from mutant phenotype /// 0006916 // anti-apoptosis // traceable author statement /// 0009438 // methylglyoxal metabolic process // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement","0004462 // lactoylglutathione lyase activity // inferred from direct assay /// 0004462 // lactoylglutathione lyase activity // inferred from electronic annotation /// 0004462 // lactoylglutathione lyase activity // traceable author statement /// 0016829 // lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:38643715-38670952 (-) // 94.12 // p21.2"]
["11733574_at",109.52352,135.18083,133.19432,110.47486,116.19633,118.517204,-0.0995903,0.2040596,0.18270159,-0.08711243,-0.014266014,0.014265537,0.6100926,0.29003072,1.0903273,0.124761224,1.0903273,"up","PGBD4",161779,"","","","chr15:34394273-34396591 (+) // 81.47 // q14"]
["11745263_x_at",841.5836,883.55615,881.63086,781.8894,766.89575,766.12,0.053071022,0.12328625,0.12013912,-0.053071022,-0.0810051,-0.08246517,0.059351683,0.0023243788,1.1258484,0.1710126,1.1258484,"up","SNX17",9784,"0006707 // cholesterol catabolic process // inferred by curator /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // non-traceable author statement /// 0006898 // receptor-mediated endocytosis // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016197 // endosomal transport // non-traceable author statement /// 0030100 // regulation of endocytosis // non-traceable author statement","0005622 // intracellular // non-traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005769 // early endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005102 // receptor binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from direct assay /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation /// 0050750 // low-density lipoprotein particle receptor binding // inferred from direct assay","chr2:27593362-27600100 (+) // 98.27 // p23.3"]
["11756435_a_at",667.4081,696.04144,696.78955,850.1874,807.76196,769.743,-0.13398075,-0.073376656,-0.071826935,0.21523094,0.14138031,0.071826935,0.09763451,0.006947774,-1.17762,-0.23587415,1.17762,"down","C1orf85",112770,"0030522 // intracellular receptor mediated signaling pathway // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 2001141 // regulation of RNA biosynthetic process // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from sequence or structural similarity /// 0016021 // integral to membrane // inferred from electronic annotation","0000988 // protein binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from mutant phenotype /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay","chr1:156262486-156265468 (-) // 98.24 // q22"]
["11733815_at",17.736012,18.495968,22.111542,15.231484,18.865639,22.188633,-0.074804306,-0.014275074,0.24331379,-0.2944293,0.014275074,0.24833488,0.9072873,0.7542635,1.0439249,0.062017966,1.0439249,"up","RPL22L1",200916,"0006412 // translation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from electronic annotation","chr3:170582666-170588045 (-) // 76.44 // q26.2"]
["11760885_a_at",20.609365,32.522827,23.26756,24.5186,24.745317,27.282007,-0.25721598,0.4009366,-0.082196236,-0.0066394806,0.0066394806,0.14743376,0.9627439,0.8945795,-1.0200475,-0.0286364,1.0200475,"down","RXRB",6257,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0030522 // intracellular receptor mediated signaling pathway // inferred from direct assay /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0048384 // retinoic acid receptor signaling pathway // inferred from electronic annotation /// 0055012 // ventricular cardiac muscle cell differentiation // inferred from electronic annotation /// 0060038 // cardiac muscle cell proliferation // inferred from electronic annotation /// 0071300 // cellular response to retinoic acid // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0004886 // 9-cis retinoic acid receptor activity // inferred from electronic annotation /// 0004886 // 9-cis retinoic acid receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0030375 // thyroid hormone receptor coactivator activity // inferred from electronic annotation /// 0042809 // vitamin D receptor binding // inferred from electronic annotation /// 0042974 // retinoic acid receptor binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046966 // thyroid hormone receptor binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr6:33163848-33168635 (-) // 97.99 // p21.32"]
["11716948_s_at",1424.2781,1465.1177,1569.7059,1750.8895,1562.3901,1545.8258,-0.12583542,-0.08504963,0.014428139,0.17202187,0.0076885223,-0.0076885223,0.4566701,0.15875053,-1.0888659,-0.122826256,1.0888659,"down","TM9SF3",56889,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005488 // binding // inferred from direct assay","chr10:98277867-98346797 (-) // 96.48 // q24.1"]
["11716170_at",56.393734,54.26046,55.386955,42.71271,43.90975,47.93767,0.14500427,0.08937073,0.11901569,-0.2558651,-0.21598911,-0.08937073,0.07875814,0.004436318,1.2353089,0.30487183,1.2353089,"up","LMNB2",84823,"","0005634 // nucleus // inferred from electronic annotation /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005638 // lamin filament // inferred from electronic annotation /// 0005652 // nuclear lamina // non-traceable author statement /// 0005882 // intermediate filament // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation","chr19:2428163-2456994 (-) // 98.03 // p13.3"]
["11750767_x_at",33.856026,42.940308,39.480404,34.519157,35.738865,39.466038,-0.14964008,0.19327974,0.07208395,-0.121655464,-0.07155895,0.07155895,0.7915991,0.53226,1.0563781,0.079126336,1.0563781,"up","SLC17A7",57030,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006817 // phosphate ion transport // traceable author statement /// 0006817 // phosphate ion transport // inferred from electronic annotation /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007269 // neurotransmitter secretion // traceable author statement /// 0007616 // long-term memory // inferred from electronic annotation /// 0014047 // glutamate secretion // traceable author statement /// 0015813 // L-glutamate transport // traceable author statement /// 0035249 // synaptic transmission, glutamatergic // inferred from electronic annotation /// 0042137 // sequestering of neurotransmitter // inferred from electronic annotation /// 0044341 // sodium-dependent phosphate transport // traceable author statement /// 0044341 // sodium-dependent phosphate transport // inferred from electronic annotation /// 0051938 // L-glutamate import // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0060079 // regulation of excitatory postsynaptic membrane potential // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // traceable author statement /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048786 // presynaptic active zone // inferred from electronic annotation /// 0060076 // excitatory synapse // inferred from electronic annotation /// 0060203 // clathrin sculpted glutamate transport vesicle membrane // traceable author statement","0005313 // L-glutamate transmembrane transporter activity // traceable author statement /// 0005315 // inorganic phosphate transmembrane transporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation /// 0015319 // sodium:inorganic phosphate symporter activity // inferred from direct assay /// 0015321 // sodium-dependent phosphate transmembrane transporter activity // inferred from electronic annotation /// 0015321 // sodium-dependent phosphate transmembrane transporter activity // traceable author statement","chr19:49933242-49945617 (-) // 99.96 // q13.33"]
["AFFX-DapX-5_at",342.78445,263.9894,317.00632,363.73654,278.47842,289.43018,0.17843819,-0.19838333,0.06564808,0.26403046,-0.12129784,-0.06564808,0.9836299,0.95223045,-1.007277,-0.010460494,1.007277,"down",0.06564808,"","","0001680 // tRNA 3'-terminal CCA addition // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006396 // RNA processing // inferred from electronic annotation /// 0006464 // cellular protein modification process // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009085 // lysine biosynthetic process // inferred from electronic annotation /// 0009089 // lysine biosynthetic process via diaminopimelate // inferred from electronic annotation /// 0019242 // methylglyoxal biosynthetic process // inferred from electronic annotation /// 0019877 // diaminopimelate biosynthetic process // inferred from electronic annotation /// 0042245 // RNA repair // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004077 // biotin-[acetyl-CoA-carboxylase] ligase activity // inferred from electronic annotation /// 0004810 // tRNA adenylyltransferase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008839 // dihydrodipicolinate reductase activity // inferred from electronic annotation /// 0008929 // methylglyoxal synthase activity // inferred from electronic annotation /// 0016437 // tRNA cytidylyltransferase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0052927 // CTP:tRNA cytidylyltransferase activity // inferred from electronic annotation /// 0052928 // CTP:3'-cytidine-tRNA cytidylyltransferase activity // inferred from electronic annotation /// 0052929 // ATP:3'-cytidine-cytidine-tRNA adenylyltransferase activity // inferred from electronic annotation /// 0070402 // NADPH binding // inferred from electronic annotation"]
["11749613_a_at",810.73785,671.06,685.2227,758.48083,661.556,685.2227,0.24266243,-0.03013134,0,0.14653969,-0.050709724,0,0.8948778,0.7289769,1.0273305,0.038900405,1.0273305,"up","OCIAD1",54940,"","0005739 // mitochondrion // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr4:48833075-48854521 (+) // 72.28 // p11"]
["11729308_at",224.0882,286.62167,290.77545,299.9685,395.4919,298.29428,-0.3942542,-0.039173126,-0.018415451,0.026490211,0.4253273,0.018415451,0.46660525,0.1654916,-1.23744,-0.30735856,1.23744,"down","CLMP",79827,"","0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","","chr11:122942175-123066013 (-) // 88.85 // q24.1"]
["11751327_a_at",184.8895,181.09904,179.38953,150.06532,165.7229,168.88948,0.08707619,0.05719185,0.04350853,-0.21399641,-0.07081413,-0.043508053,0.21240306,0.034129504,1.126644,0.17203175,1.126644,"up","FAM114A2",10827,"","","0017076 // purine nucleotide binding // non-traceable author statement","chr5:153372514-153418467 (-) // 99.71 // q33.2"]
["11745516_a_at",245.1539,224.46848,208.96715,210.02698,192.54428,198.86537,0.2267623,0.09958696,-0.0036497116,0.0036492348,-0.121735096,-0.07513332,0.3383159,0.08646715,1.1265981,0.17197296,1.1265981,"up","STX16",8675,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006891 // intra-Golgi vesicle-mediated transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0042147 // retrograde transport, endosome to Golgi // inferred from direct assay","0000139 // Golgi membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005792 // microsome // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031201 // SNARE complex // traceable author statement","0005484 // SNAP receptor activity // inferred from direct assay /// 0005484 // SNAP receptor activity // inferred from electronic annotation /// 0005484 // SNAP receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr20:57226308-57251581 (+) // 95.58 // q13.32"]
["11719702_a_at",1025.9541,862.05695,817.36743,696.7283,610.6774,611.05664,0.4431038,0.19199276,0.11519432,-0.11519432,-0.30537987,-0.30448437,0.13554753,0.013855014,1.4061818,0.49178314,1.4061818,"up","FARP1",10160,"0010923 // negative regulation of phosphatase activity // inferred from direct assay /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0019898 // extrinsic to membrane // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // traceable author statement /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation","chr13:98795363-99102023 (+) // 94.6 // q32.2"]
["11747978_a_at",31.618584,32.788948,31.05764,33.670235,35.190964,38.0167,-0.071568966,-0.019132137,-0.09739351,0.019132137,0.08286333,0.19429159,0.24361539,0.045157984,-1.1184188,-0.16146053,1.1184188,"down","MYRIP",25924,"0006886 // intracellular protein transport // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from sequence or structural similarity","0001750 // photoreceptor outer segment // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from electronic annotation /// 0031045 // dense core granule // inferred from sequence or structural similarity /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // non-traceable author statement /// 0017022 // myosin binding // inferred from electronic annotation /// 0017137 // Rab GTPase binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:40141501-40299833 (+) // 99.96 // p22.1"]
["11746987_a_at",6.8851,7.085605,7.6335163,7.34398,6.9592443,6.884665,-0.028433323,0.012980223,0.12043691,0.06465125,-0.012980223,-0.028524399,0.8483018,0.63328534,1.0190883,0.027279016,1.0190883,"up","ADAM2",2515,"0006508 // proteolysis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007342 // fusion of sperm to egg plasma membrane // traceable author statement /// 0008542 // visual learning // inferred from electronic annotation /// 0030534 // adult behavior // inferred from electronic annotation","0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0005178 // integrin binding // traceable author statement /// 0008237 // metallopeptidase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation","chr8:39601256-39695728 (-) // 99.18 // p11.22"]
["11752377_a_at",150.67914,147.8896,147.52547,129.5356,126.27526,145.40208,0.040973663,0.014015198,0.010458469,-0.17715645,-0.21393347,-0.010457993,0.30347988,0.06986888,1.113935,0.15566504,1.113935,"up","CASC3",22794,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0008298 // intracellular mRNA localization // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0035145 // exon-exon junction complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from direct assay","chr17:38296569-38328417 (+) // 90.72 // q21.1"]
["11737242_at",13.226824,13.242558,12.800656,12.252549,13.73447,12.785447,0.02362442,0.025339603,-0.02362442,-0.08676028,0.07795906,-0.025339603,0.88865453,0.7155137,1.0138378,0.01982688,1.0138378,"up","TMEM233",387890,"0009607 // response to biotic stimulus // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:120031263-120080654 (+) // 67.61 // q24.23"]
["11747575_a_at",55.932648,39.16074,46.991966,51.31507,49.959885,55.600746,0.14361477,-0.3706684,-0.1076622,0.019306183,-0.019306183,0.13502789,0.68058056,0.37105256,-1.1146426,-0.15658122,1.1146426,"down","SORBS3",10174,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0031589 // cell-substrate adhesion // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0051495 // positive regulation of cytoskeleton organization // non-traceable author statement /// 0051496 // positive regulation of stress fiber assembly // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0017166 // vinculin binding // inferred from physical interaction","chr8:22409460-22432561 (+) // 96.16 // p21.3"]
["11744492_x_at",1702.6355,1519.4917,1598.876,1958.7786,1774.0564,1646.9338,0.023993492,-0.14018726,-0.0667181,0.22617817,0.083275795,-0.023993492,0.43932062,0.1458764,-1.1142895,-0.15612413,1.1142895,"down","SRSF5",6430,"0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006376 // mRNA splice site selection // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0009611 // response to wounding // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0051726 // regulation of cell cycle // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016607 // nuclear speck // inferred from sequence or structural similarity","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0050733 // RS domain binding // inferred from electronic annotation","chr14:70233898-70238721 (+) // 96.54 // q24.2"]
["11726346_a_at",104.25032,101.97579,103.5562,102.22288,99.81256,107.06039,0.018986225,-0.0128388405,0.009347916,-0.009347916,-0.043772697,0.057359695,0.96769106,0.90992016,1.0026041,0.0037520777,1.0026041,"up","LAT2",7462,"0019722 // calcium-mediated signaling // inferred from genetic interaction /// 0035556 // intracellular signal transduction // inferred from genetic interaction /// 0042113 // B cell activation // inferred from direct assay /// 0042113 // B cell activation // traceable author statement /// 0043303 // mast cell degranulation // inferred from electronic annotation /// 0050853 // B cell receptor signaling pathway // inferred from direct assay","0005622 // intracellular // inferred from genetic interaction /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0042169 // SH2 domain binding // inferred from mutant phenotype","chr7:73624086-73644161 (+) // 92.78 // q11.23"]
["11760127_at",1157.945,1132.2236,1209.7185,1700.223,1520.5237,1276.8917,-0.10208702,-0.13449478,-0.03898239,0.45207024,0.29091454,0.03898239,0.24582621,0.046119478,-1.2767805,-0.3525105,1.2767805,"down","LIMS1",3987,"0007569 // cell aging // traceable author statement /// 0034329 // cell junction assembly // traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from expression pattern","0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:109150810-109303702 (+) // 82.8 // q12.3"]
["11716621_a_at",2271.1514,2401.8286,2412.2236,2036.5007,2173.123,2206.0303,0.020985603,0.10169506,0.107925415,-0.13634586,-0.042668343,-0.020985603,0.21039036,0.033525307,1.1046087,0.14353533,1.1046087,"up","TNPO1",3842,"0000060 // protein import into nucleus, translocation // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0008139 // nuclear localization sequence binding // traceable author statement /// 0008565 // protein transporter activity // inferred from electronic annotation","chr5:72112414-72210215 (+) // 90.72 // q13.2"]
["11727755_a_at",56.91258,54.6008,58.75442,61.998837,54.34537,64.05629,-0.022975445,-0.082800865,0.022974968,0.10051823,-0.089565754,0.14761734,0.67534053,0.36442003,-1.057353,-0.08045713,1.057353,"down","ZNF653",115950,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:11594241-11616821 (-) // 94.11 // p13.2"]
["11754381_a_at",100.40407,97.96729,93.396255,78.72286,86.63509,97.76467,0.07140684,0.03596115,-0.032974243,-0.27955675,-0.14138699,0.032974243,0.48817787,0.18176515,1.1127435,0.15412107,1.1127435,"up","TMOD1",7111,"0030049 // muscle filament sliding // traceable author statement /// 0030239 // myofibril assembly // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0008180 // signalosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030016 // myofibril // inferred from electronic annotation /// 0030863 // cortical cytoskeleton // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005523 // tropomyosin binding // inferred from electronic annotation","chr9:100360658-100364028 (+) // 91.78 // q22.33"]
["11735213_a_at",47.17312,50.36053,50.81233,47.767017,59.06453,56.525944,-0.10077095,-0.006442547,0.006442547,-0.08272123,0.22355604,0.16017723,0.56793267,0.24860701,-1.0972769,-0.13392767,1.0972769,"down","CCDC68",80323,"","","","chr18:52568741-52626739 (-) // 87.04 // q21.2"]
["11721319_s_at",396.50494,323.39603,331.49948,389.09692,353.89215,314.9687,0.21118069,-0.08285618,-0.047151566,0.1839714,0.047151566,-0.120949745,0.98039234,0.94337916,-1.0067229,-0.009666676,1.0067229,"down","LYRM4",57128,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","","chr6:5108253-5261157 (-) // 83.01 // p25.1"]
["11731475_a_at",9.071998,10.715656,9.796093,8.407539,10.030369,10.61636,-0.12783432,0.11239338,-0.01704812,-0.237571,0.01704812,0.098962784,0.9344565,0.8208726,1.020793,0.029690286,1.020793,"up","SFRP4",6424,"0001944 // vasculature development // not recorded /// 0002092 // positive regulation of receptor internalization // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007409 // axonogenesis // not recorded /// 0007420 // brain development // not recorded /// 0007565 // female pregnancy // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008406 // gonad development // not recorded /// 0009725 // response to hormone stimulus // non-traceable author statement /// 0009790 // embryo development // not recorded /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0022601 // menstrual cycle phase // non-traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0045606 // positive regulation of epidermal cell differentiation // inferred from direct assay /// 0046329 // negative regulation of JNK cascade // not recorded /// 0046329 // negative regulation of JNK cascade // inferred from electronic annotation /// 0046697 // decidualization // not recorded /// 0046697 // decidualization // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0055062 // phosphate ion homeostasis // inferred from direct assay /// 0060056 // mammary gland involution // not recorded /// 0060056 // mammary gland involution // inferred from electronic annotation /// 0060429 // epithelium development // not recorded /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from direct assay /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from mutant phenotype /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from genetic interaction /// 2000119 // negative regulation of sodium-dependent phosphate transport // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0032589 // neuron projection membrane // not recorded","0017147 // Wnt-protein binding // not recorded /// 0017147 // Wnt-protein binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // not recorded /// 0042813 // Wnt-activated receptor activity // not recorded","chr7:37945531-37956717 (-) // 87.37 // p14.1"]
["11728862_at",92.38525,62.364376,68.21329,83.684166,60.940357,63.102394,0.49378824,-0.07315159,0.056179047,0.35108042,-0.10647583,-0.056179047,0.8770685,0.69058776,1.0689024,0.09613009,1.0689024,"up","DCAF17",80067,"0016567 // protein ubiquitination // inferred by curator /// 0016567 // protein ubiquitination // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0080008 // CUL4-RING ubiquitin ligase complex // inferred from direct assay","","chr2:172290760-172341360 (+) // 78.07 // q31.1"]
["11760954_x_at",44.086704,62.491314,58.093155,69.0516,53.060562,55.193577,-0.36109066,0.14222097,0.0369339,0.28624105,-0.093794346,-0.0369339,0.826541,0.59247285,-1.0810872,-0.112482935,1.0810872,"down","EIF3G",8666,"0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred by curator /// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // traceable author statement /// 0006413 // translational initiation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from direct assay /// 0005852 // eukaryotic translation initiation factor 3 complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred by curator /// 0003743 // translation initiation factor activity // inferred from direct assay /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr19:10228701-10230578 (-) // 63.25 // p13.2"]
["11753188_a_at",13.108298,13.57204,13.803147,11.818345,13.365119,12.917142,-0.013996124,0.036160946,0.06052041,-0.16344881,0.013996124,-0.03518963,0.5044591,0.19464493,1.0637132,0.08910921,1.0637132,"up","DOC2A",8448,"0006810 // transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0016079 // synaptic vesicle exocytosis // inferred from electronic annotation /// 0017158 // regulation of calcium ion-dependent exocytosis // inferred from mutant phenotype /// 0017158 // regulation of calcium ion-dependent exocytosis // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0005488 // binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005544 // calcium-dependent phospholipid binding // inferred from electronic annotation","chr16:30017439-30022348 (-) // 92.12 // p11.2"]
["11753941_x_at",198.5534,210.53113,209.2824,241.1833,223.59494,225.77834,-0.1279335,-0.04342699,-0.052009583,0.15266943,0.04342699,0.05744648,0.1698297,0.02180504,-1.1164905,-0.15897095,1.1164905,"down","SFR1",119392,"0000724 // double-strand break repair via homologous recombination // inferred from mutant phenotype /// 0000724 // double-strand break repair via homologous recombination // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0032798 // Swi5-Sfr1 complex // inferred from direct assay /// 0032798 // Swi5-Sfr1 complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr10:105881938-105886138 (+) // 82.97 // q25.1"]
["11760185_s_at",35.53639,32.336613,33.067165,36.444996,34.240387,31.459698,0.07874775,-0.057380676,-0.025149822,0.11517143,0.025149822,-0.09704447,0.9434396,0.842382,-1.0109324,-0.015686594,1.0109324,"down","ARRB1",408,"0002031 // G-protein coupled receptor internalization // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007219 // Notch signaling pathway // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0009968 // negative regulation of signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0016567 // protein ubiquitination // inferred from mutant phenotype /// 0030168 // platelet activation // traceable author statement /// 0031397 // negative regulation of protein ubiquitination // inferred from direct assay /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0032715 // negative regulation of interleukin-6 production // inferred from direct assay /// 0032717 // negative regulation of interleukin-8 production // inferred from direct assay /// 0035025 // positive regulation of Rho protein signal transduction // inferred from mutant phenotype /// 0035066 // positive regulation of histone acetylation // inferred from mutant phenotype /// 0043086 // negative regulation of catalytic activity // traceable author statement /// 0043149 // stress fiber assembly // inferred from mutant phenotype /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0043547 // positive regulation of GTPase activity // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from direct assay /// 0090240 // positive regulation of histone H4 acetylation // inferred from mutant phenotype","0000139 // Golgi membrane // traceable author statement /// 0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005765 // lysosomal membrane // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005834 // heterotrimeric G-protein complex // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0031143 // pseudopodium // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0004402 // histone acetyltransferase activity // inferred from direct assay /// 0004857 // enzyme inhibitor activity // traceable author statement /// 0005096 // GTPase activator activity // inferred from mutant phenotype /// 0005159 // insulin-like growth factor receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0031701 // angiotensin receptor binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from mutant phenotype","chr11:74973500-74975376 (-) // 74.59 // q13.4"]
["11721355_a_at",83.05621,70.49964,77.222885,71.938354,50.826183,42.543736,0.22189951,-0.01457262,0.116839886,0.014573097,-0.4866166,-0.7432418,0.34964684,0.09221792,1.4271636,0.5131507,1.4271636,"up","YPEL3",83719,"","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation","","chr16:30103634-30107521 (-) // 86.37 // p11.2"]
["11715910_a_at",177.30371,141.84883,140.62486,159.0146,139.12973,131.1906,0.32811975,0.006251335,-0.006251335,0.17105627,-0.021672249,-0.10643864,0.7873401,0.5254096,1.0681084,0.09505812,1.0681084,"up","MYO6",4646,"0006605 // protein targeting // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from sequence or structural similarity /// 0006897 // endocytosis // inferred from mutant phenotype /// 0006897 // endocytosis // inferred from sequence or structural similarity /// 0006897 // endocytosis // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007416 // synapse assembly // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from direct assay /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0014047 // glutamate secretion // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016358 // dendrite development // inferred from electronic annotation /// 0030048 // actin filament-based movement // inferred from sequence or structural similarity /// 0030048 // actin filament-based movement // non-traceable author statement /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from direct assay /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0042491 // auditory receptor cell differentiation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0051046 // regulation of secretion // inferred from mutant phenotype /// 0071257 // cellular response to electrical stimulus // inferred from electronic annotation","0001726 // ruffle // inferred from direct assay /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005902 // microvillus // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0005938 // cell cortex // inferred from sequence or structural similarity /// 0012506 // vesicle membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0016459 // myosin complex // inferred from electronic annotation /// 0016461 // unconventional myosin complex // traceable author statement /// 0016461 // unconventional myosin complex // non-traceable author statement /// 0016591 // DNA-directed RNA polymerase II, holoenzyme // inferred from direct assay /// 0030139 // endocytic vesicle // inferred from sequence or structural similarity /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030665 // clathrin coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from direct assay /// 0031941 // filamentous actin // inferred from sequence or structural similarity /// 0031965 // nuclear membrane // inferred from direct assay /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation /// 0045334 // clathrin-coated endocytic vesicle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from sequence or structural similarity /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // traceable author statement /// 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from sequence or structural similarity /// 0005516 // calmodulin binding // traceable author statement /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0043531 // ADP binding // inferred from sequence or structural similarity /// 0051015 // actin filament binding // inferred from direct assay /// 0051015 // actin filament binding // inferred from sequence or structural similarity /// 0060001 // minus-end directed microfilament motor activity // non-traceable author statement","chr6:76458892-76629254 (+) // 91.39 // q14.1"]
["11742547_at",14.404585,12.836249,14.102289,10.568616,15.93935,14.461426,0.015299559,-0.15100503,-0.01529932,-0.43144202,0.16136432,0.020981073,0.9535564,0.869008,1.0229228,0.032697205,1.0229228,"up","SDR16C6P",442388,"","","","chr8:57285626-57307924 (-) // 100.0 // q12.1"]
["11742130_a_at",33.02505,34.601814,33.375237,32.772434,40.86898,46.065865,-0.041252136,0.026034832,-0.026034832,-0.052330017,0.2661934,0.4388852,0.49439216,0.18658687,-1.1739196,-0.23133355,1.1739196,"down","HTR4",3360,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007187 // G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger // traceable author statement /// 0007210 // serotonin receptor signaling pathway // inferred from direct assay /// 0007210 // serotonin receptor signaling pathway // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004993 // serotonin receptor activity // inferred from direct assay /// 0004993 // serotonin receptor activity // traceable author statement","chr5:147830594-148033741 (-) // 100.0 // q32"]
["11746164_a_at",431.07492,400.86658,383.88513,420.24753,409.05615,390.50977,0.09022808,-0.014588356,-0.077035904,0.053528786,0.014588356,-0.05235195,0.97404146,0.92588466,-1.003973,-0.0057204813,1.003973,"down","MEAF6",64769,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0043968 // histone H2A acetylation // inferred from direct assay /// 0043981 // histone H4-K5 acetylation // inferred from direct assay /// 0043982 // histone H4-K8 acetylation // inferred from direct assay /// 0043983 // histone H4-K12 acetylation // inferred from direct assay /// 0043984 // histone H4-K16 acetylation // inferred from direct assay /// 0044154 // histone H3-K14 acetylation // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0035267 // NuA4 histone acetyltransferase complex // inferred from direct assay /// 0070776 // MOZ/MORF histone acetyltransferase complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr1:37962146-37980334 (-) // 89.81 // p34.3"]
["11740730_a_at",359.47058,309.11203,331.72287,296.32776,292.22293,294.1476,0.24821186,0.030467987,0.13231659,-0.030467987,-0.050592422,-0.041121483,0.25181168,0.048144743,1.1310997,0.1777261,1.1310997,"up","C10orf125",282969,"0005996 // monosaccharide metabolic process // inferred from electronic annotation /// 0006004 // fucose metabolic process // inferred from sequence or structural similarity /// 0006004 // fucose metabolic process // inferred from electronic annotation","","0016853 // isomerase activity // inferred from electronic annotation /// 0016857 // racemase and epimerase activity, acting on carbohydrates and derivatives // inferred from sequence or structural similarity /// 0016857 // racemase and epimerase activity, acting on carbohydrates and derivatives // inferred from electronic annotation /// 0042806 // fucose binding // inferred from sequence or structural similarity /// 0042806 // fucose binding // inferred from electronic annotation /// 0048029 // monosaccharide binding // inferred from electronic annotation","chr10:135168577-135171529 (-) // 98.24 // q26.3"]
["11754670_x_at",616.49615,554.8366,543.79346,604.44476,564.4714,549.08563,0.13961029,-0.012418747,-0.041422844,0.11112881,0.012418747,-0.027450562,0.9873616,0.9629349,-1.0023892,-0.0034427652,1.0023892,"down","MIR4647 /// SLC35B2","100616124 /// 347734","0006810 // transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype /// 0046963 // 3'-phosphoadenosine 5'-phosphosulfate transport // inferred from direct assay /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0000139 // Golgi membrane // traceable author statement /// 0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from mutant phenotype /// 0046964 // 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity // inferred from direct assay","chr6:44221842-44225265 (-) // 95.31 // p21.1"]
["11719738_at",105.12472,116.4835,107.85906,217.55615,224.6985,196.58722,-0.5255456,-0.377522,-0.4885006,0.5237398,0.570343,0.3775215,0.02301539,0.00019925716,-1.9377613,-0.9543909,1.9377613,"down","DCP2",167227,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from mutant phenotype /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from electronic annotation /// 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement /// 0071044 // histone mRNA catabolic process // inferred from mutant phenotype","0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016442 // RNA-induced silencing complex // inferred from direct assay","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016896 // exoribonuclease activity, producing 5'-phosphomonoesters // traceable author statement /// 0030145 // manganese ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:112312398-112356761 (+) // 96.56 // q22.2"]
["11717782_s_at",951.54926,843.2743,881.7568,914.13153,825.36127,827.53174,0.14208698,-0.03218937,0.03218937,0.084210396,-0.063165665,-0.059376717,0.7314707,0.44047835,1.0425667,0.060139626,1.0425667,"up","PHF5A",84844,"0000398 // nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005686 // U2 snRNP // inferred from direct assay /// 0005689 // U12-type spliceosomal complex // inferred from direct assay /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from sequence or structural similarity /// 0016607 // nuclear speck // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation","chr22:41855720-41864691 (-) // 94.32 // q13.2"]
["11742862_a_at",10.699618,9.906676,11.369575,11.039806,13.320458,14.248392,-0.066387415,-0.17747355,0.021231651,-0.021231651,0.24969721,0.34685254,0.361977,0.09898526,-1.2024547,-0.26598254,1.2024547,"down","GPR116",221395,"0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement","chr6:46820246-46889742 (-) // 98.41 // p12.3"]
["AFFX-r2-TagA_at",8.9732895,9.602562,13.306576,12.291926,13.218365,15.318417,-0.5064187,-0.4086361,0.062011957,-0.052416325,0.052416325,0.26513982,0.42098516,0.13404706,-1.2947985,-0.37272757,1.2947985,"down",-0.052416325,0.052416325,0.26513982,-0.5064187,-0.4086361,0.062011957]
["11761923_a_at",29.19843,25.678295,29.250174,18.572111,25.164532,26.131662,0.17271662,-0.012624741,0.17527103,-0.48003626,-0.04178238,0.012624741,0.47042432,0.1688989,1.2154739,0.2815189,1.2154739,"up","RXFP1",59350,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007567 // parturition // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0060427 // lung connective tissue development // inferred from electronic annotation /// 0060658 // nipple morphogenesis // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from direct assay /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0042562 // hormone binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:159443042-159573932 (+) // 94.14 // q32.1"]
["11731386_a_at",9.861434,13.365583,12.268708,11.528314,12.061378,10.885003,-0.2579186,0.18073487,0.057195187,-0.0326066,0.032606363,-0.11544609,0.93782,0.82827526,1.0223005,0.031819306,1.0223005,"up","HYAL4",23553,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006027 // glycosaminoglycan catabolic process // traceable author statement /// 0007342 // fusion of sperm to egg plasma membrane // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004415 // hyalurononglucosaminidase activity // inferred from electronic annotation /// 0004415 // hyalurononglucosaminidase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation","chr7:123488141-123517534 (+) // 76.94 // q31.32"]
["11759795_at",8.009575,8.072311,8.19604,7.2039695,8.747496,8.02673,-0.007171631,0.004084587,0.026029587,-0.16010523,0.119972706,-0.0040848255,0.924228,0.7974313,1.0156382,0.022386609,1.0156382,"up","SLC22A2",6582,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // traceable author statement /// 0007589 // body fluid secretion // traceable author statement /// 0015695 // organic cation transport // inferred from direct assay /// 0015695 // organic cation transport // inferred from electronic annotation /// 0015695 // organic cation transport // traceable author statement /// 0034220 // ion transmembrane transport // inferred from electronic annotation /// 0042136 // neurotransmitter biosynthetic process // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0015075 // ion transmembrane transporter activity // inferred from electronic annotation /// 0015101 // organic cation transmembrane transporter activity // inferred from direct assay /// 0015101 // organic cation transmembrane transporter activity // inferred from electronic annotation /// 0015101 // organic cation transmembrane transporter activity // traceable author statement /// 0022857 // transmembrane transporter activity // inferred from electronic annotation","chr6:160670129-160680042 (-) // 96.55 // q25.3"]
["11728168_a_at",12.374478,19.54829,19.261456,17.523615,16.8688,18.626701,-0.54596853,0.11370611,0.09238052,-0.04403591,-0.098979,0.04403591,0.8973807,0.7340423,-1.0572386,-0.08030097,1.0572386,"down","KAZN",23254,"0031424 // keratinization // inferred from electronic annotation","0001533 // cornified envelope // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030057 // desmosome // inferred from direct assay /// 0030057 // desmosome // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","","chr1:14925183-15444539 (+) // 93.8 // p36.21"]
["11756714_a_at",1262.1538,1153.0916,1133.8706,1148.8439,1125.533,1083.6765,0.1451683,0.014787674,-0.00946331,0.00946331,-0.020111084,-0.07478523,0.5347331,0.21891636,1.0560235,0.07864191,1.0560235,"up","PPP2R2A",5520,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006470 // protein dephosphorylation // inferred from direct assay /// 0007165 // signal transduction // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement","0000159 // protein phosphatase type 2A complex // inferred from direct assay /// 0000159 // protein phosphatase type 2A complex // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004722 // protein serine/threonine phosphatase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008601 // protein phosphatase type 2A regulator activity // traceable author statement /// 0008601 // protein phosphatase type 2A regulator activity // inferred from electronic annotation","chr8:26222914-26228582 (+) // 99.02 // p21.2"]
["11761194_at",8.365948,8.380477,7.765548,6.4626155,8.582825,9.171064,-0.0012516975,0.0012516975,-0.108692646,-0.37366247,0.03567195,0.13130832,0.9450507,0.8473136,1.0228987,0.03266324,1.0228987,"up","TGOLN2",10618,"","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030133 // transport vesicle // traceable author statement","0005515 // protein binding // inferred from physical interaction","chr2:85551366-85555093 (-) // 61.38 // p11.2"]
["11733784_at",742.4588,701.2824,699.8801,701.52814,729.0541,654.5046,0.08206272,-0.0002527237,-0.0031404495,0.0002527237,0.05577755,-0.09984493,0.76299834,0.4872871,1.028704,0.040827986,1.028704,"up","PPP2R1B",5519,"0006886 // intracellular protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 2001241 // positive regulation of extrinsic apoptotic signaling pathway in absence of ligand // inferred from mutant phenotype","0030117 // membrane coat // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr11:111608604-111637169 (-) // 92.01 // q23.1"]
["11730337_at",93.99779,127.05621,131.48549,115.3238,102.90622,103.52143,-0.21711111,0.21765757,0.2670946,0.07788038,-0.08647919,-0.077879906,0.7772333,0.5086434,1.0852594,0.118039966,1.0852594,"up","SMAD6",4091,"0001657 // ureteric bud development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006955 // immune response // inferred from mutant phenotype /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0007352 // zygotic specification of dorsal/ventral axis // inferred from mutant phenotype /// 0010991 // negative regulation of SMAD protein complex assembly // inferred from direct assay /// 0030509 // BMP signaling pathway // traceable author statement /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from mutant phenotype /// 0030514 // negative regulation of BMP signaling pathway // inferred from direct assay /// 0031589 // cell-substrate adhesion // inferred from mutant phenotype /// 0034616 // response to laminar fluid shear stress // inferred from expression pattern /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0045750 // positive regulation of S phase of mitotic cell cycle // inferred from mutant phenotype /// 0060394 // negative regulation of pathway-restricted SMAD protein phosphorylation // inferred from direct assay /// 0060394 // negative regulation of pathway-restricted SMAD protein phosphorylation // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement","0003682 // chromatin binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030617 // transforming growth factor beta receptor, inhibitory cytoplasmic mediator activity // inferred from direct assay /// 0030617 // transforming growth factor beta receptor, inhibitory cytoplasmic mediator activity // inferred from mutant phenotype /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0034713 // type I transforming growth factor beta receptor binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0070410 // co-SMAD binding // inferred from physical interaction /// 0070411 // I-SMAD binding // inferred from physical interaction /// 0070412 // R-SMAD binding // inferred from physical interaction /// 0070698 // type I activin receptor binding // inferred from direct assay","chr15:66994545-67074326 (+) // 92.25 // q22.31"]
["11761735_a_at",45.05815,47.130386,40.594883,46.367954,44.063324,54.542614,-0.020669937,0.044199467,-0.17116022,0.020669937,-0.05287981,0.25492573,0.6508544,0.33454478,-1.0893359,-0.12344891,1.0893359,"down","RXRB",6257,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0030522 // intracellular receptor mediated signaling pathway // inferred from direct assay /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0048384 // retinoic acid receptor signaling pathway // inferred from electronic annotation /// 0055012 // ventricular cardiac muscle cell differentiation // inferred from electronic annotation /// 0060038 // cardiac muscle cell proliferation // inferred from electronic annotation /// 0071300 // cellular response to retinoic acid // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0004886 // 9-cis retinoic acid receptor activity // inferred from electronic annotation /// 0004886 // 9-cis retinoic acid receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0030375 // thyroid hormone receptor coactivator activity // inferred from electronic annotation /// 0042809 // vitamin D receptor binding // inferred from electronic annotation /// 0042974 // retinoic acid receptor binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046966 // thyroid hormone receptor binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr6:33163387-33168439 (-) // 97.45 // p21.32"]
["11740151_at",9.223754,10.570324,7.8827586,7.803317,7.8716326,8.641698,0.16034651,0.3569398,-0.06630707,-0.08091998,-0.06834483,0.06630707,0.5653334,0.24597926,1.131298,0.17797893,1.131298,"up","CYP7B1",9420,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006699 // bile acid biosynthetic process // inferred from electronic annotation /// 0006699 // bile acid biosynthetic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0007613 // memory // inferred from electronic annotation /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0008206 // bile acid metabolic process // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0033147 // negative regulation of intracellular estrogen receptor signaling pathway // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0060740 // prostate gland epithelium morphogenesis // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004497 // monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0008396 // oxysterol 7-alpha-hydroxylase activity // inferred from electronic annotation /// 0008396 // oxysterol 7-alpha-hydroxylase activity // traceable author statement /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0033783 // 25-hydroxycholesterol 7alpha-hydroxylase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:65508158-65711348 (-) // 94.25 // q12.3"]
["11745584_a_at",34.010174,45.115063,45.240208,58.555054,49.040928,51.786983,-0.46982956,-0.062186718,-0.058190346,0.31399775,0.058190346,0.13679361,0.3223326,0.0787668,-1.2891285,-0.36639613,1.2891285,"down","ZFP57",346171,"0006349 // regulation of gene expression by genetic imprinting // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0043045 // DNA methylation involved in embryo development // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:29640168-29644931 (-) // 100.0 // p22.1"]
["11726329_x_at",8.730898,9.449466,8.956514,10.199698,9.506784,8.937225,-0.07545495,0.03864765,-0.03864765,0.14886951,0.047372103,-0.04175806,0.6204063,0.3005784,-1.0545636,-0.076646164,1.0545636,"down","GBP1",2633,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement","0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0005525 // GTP binding // traceable author statement","chr1:89517986-89531043 (-) // 99.77 // p22.2"]
["11732089_a_at",11.473291,11.180838,11.335227,11.56817,10.634578,11.085094,0.027358294,-0.009892464,0.009892464,0.039239645,-0.08215809,-0.022299767,0.7366435,0.44731015,1.0216202,0.030858891,1.0216202,"up","ISX",91464,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr22:35462129-35483380 (+) // 85.37 // q12.3"]
["11744103_at",340.13184,355.09732,314.21173,289.45105,277.49863,272.34555,0.17356586,0.2356863,0.05920887,-0.05920887,-0.12004757,-0.14708996,0.117303744,0.010184946,1.2015826,0.26493576,1.2015826,"up","TLCD1",116238,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr17:27051375-27053275 (-) // 91.82 // q11.2"]
["11755659_x_at",136.155,142.43854,140.72943,138.63797,135.85826,129.63011,-0.013036251,0.052052975,0.034638405,0.013036728,-0.016183853,-0.08388519,0.5081176,0.19731727,1.0378245,0.053562514,1.0378245,"up","CTAGE5",4253,"0043085 // positive regulation of catalytic activity // traceable author statement","","0008047 // enzyme activator activity // traceable author statement","chr14:39745429-39819849 (+) // 98.63 // q21.1"]
["11735559_s_at",11.922436,11.185161,9.3356,9.200849,8.858562,10.464419,0.2705257,0.1784327,-0.08233881,-0.1033144,-0.15800858,0.08233905,0.546554,0.22925337,1.1343516,0.1818679,1.1343516,"up","TBC1D26 /// TBC1D28","254272 /// 353149","0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation","chr17:15635560-15652509 (+) // 97.58 // p12 /// chr17:18538838-18547740 (-) // 99.95 // p11.2"]
["11750002_a_at",1339.5452,1318.7278,1320.7518,1438.951,1225.8278,1189.4633,0.021490097,-0.0011062622,0.0011062622,0.12476444,-0.10649681,-0.1499424,0.8206109,0.58282244,1.0360222,0.0510549,1.0360222,"up","RAB2A",5862,"0006184 // GTP catabolic process // inferred from direct assay /// 0006184 // GTP catabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005626 // insoluble fraction // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0003924 // GTPase activity // traceable author statement /// 0005525 // GTP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from electronic annotation /// 0019003 // GDP binding // inferred from direct assay","chr8:61429494-61533547 (+) // 97.83 // q12.1"]
["11741701_x_at",35.481075,48.019848,43.84268,30.471216,27.847881,24.507582,0.10980129,0.5463824,0.4150877,-0.10980129,-0.23968077,-0.4240203,0.15301618,0.01774424,1.5314779,0.61492455,1.5314779,"up","HIST1H2BJ",8970,"0006334 // nucleosome assembly // non-traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation","0000786 // nucleosome // non-traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr6:27099769-27100575 (-) // 99.5 // p22.1"]
["11758501_s_at",69.06374,58.993397,52.89196,73.22287,64.564476,72.33806,0.04859352,-0.17878103,-0.33628607,0.13295937,-0.04859352,0.11542082,0.4482663,0.15222631,-1.1664195,-0.22208674,1.1664195,"down","NMNAT1",64802,"0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009435 // NAD biosynthetic process // inferred by curator /// 0009435 // NAD biosynthetic process // inferred from electronic annotation /// 0019363 // pyridine nucleotide biosynthetic process // inferred from electronic annotation /// 0019674 // NAD metabolic process // traceable author statement /// 0043526 // neuroprotection // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0000309 // nicotinamide-nucleotide adenylyltransferase activity // inferred from direct assay /// 0000309 // nicotinamide-nucleotide adenylyltransferase activity // traceable author statement /// 0000309 // nicotinamide-nucleotide adenylyltransferase activity // inferred from electronic annotation /// 0004515 // nicotinate-nucleotide adenylyltransferase activity // inferred from direct assay /// 0004515 // nicotinate-nucleotide adenylyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation","chr1:10045103-10045555 (+) // 72.25 // p36.22"]
["11741238_a_at",1778.7277,1460.7408,1352.7916,1408.256,1248.7123,1271.8154,0.36592102,0.081775665,-0.028985023,0.028985023,-0.14448357,-0.11803532,0.46981698,0.16820009,1.1626487,0.21741521,1.1626487,"up","COPE",11316,"0006810 // transport // inferred from electronic annotation /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // traceable author statement /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // inferred from electronic annotation /// 0006891 // intra-Golgi vesicle-mediated transport // inferred from sequence or structural similarity /// 0015031 // protein transport // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0048205 // COPI coating of Golgi vesicle // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030126 // COPI vesicle coat // inferred from sequence or structural similarity /// 0030126 // COPI vesicle coat // inferred from electronic annotation /// 0030137 // COPI-coated vesicle // inferred from electronic annotation /// 0030663 // COPI coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation","chr19:19010322-19030199 (-) // 99.8 // p13.11"]
["11741658_s_at",375.88977,306.74515,288.234,354.41467,281.48257,270.57837,0.3381691,0.04489994,-0.04489994,0.2532978,-0.07909489,-0.1360941,0.8206617,0.5829901,1.0717884,0.10002015,1.0717884,"up","SYDE1",85360,"0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0032862 // activation of Rho GTPase activity // inferred from sequence or structural similarity /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // inferred from sequence or structural similarity","chr19:15218213-15225789 (+) // 99.85 // p13.12"]
["11747174_x_at",10.007163,9.807202,9.606686,10.030377,9.59904,9.116517,0.04402089,0.0149014,-0.0149014,0.047363758,-0.016049862,-0.09045744,0.75236946,0.47162077,1.0241224,0.03438809,1.0241224,"up","ERO1LB",56605,"0006457 // protein folding // traceable author statement /// 0006467 // protein thiol-disulfide exchange // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0055114 // oxidation-reduction process // non-traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0016491 // oxidoreductase activity // non-traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016671 // oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // non-traceable author statement","chr1:236393410-236445319 (-) // 79.3 // q42.3"]
["11731170_s_at",22.741335,28.334253,24.452965,27.489794,24.961332,30.005678,-0.20397854,0.113251686,-0.09928608,0.06960058,-0.06960058,0.19594002,0.66132647,0.34685665,-1.0932709,-0.12865092,1.0932709,"down","DEFB126",81623,"0006952 // defense response // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0030112 // glycocalyx // inferred from electronic annotation","","chr20:123009-126392 (+) // 91.23 // p13"]
["11745460_at",407.12494,403.93384,378.14346,505.23447,523.45416,511.90457,-0.15574074,-0.16709328,-0.26227856,0.15574074,0.206851,0.17466259,0.032030836,0.00053433364,-1.2960509,-0.37412238,1.2960509,"down","NDUFV3",4731,"0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0006120 // mitochondrial electron transport, NADH to ubiquinone // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation","0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement /// 0008137 // NADH dehydrogenase (ubiquinone) activity // traceable author statement","chr21:44317034-44329779 (+) // 60.52 // q22.3"]
["11721883_at",372.20563,379.01987,348.5058,431.6957,382.05606,391.05612,-0.031929016,-0.0057554245,-0.12684631,0.18198586,0.0057554245,0.039346695,0.39305854,0.11647292,-1.0947031,-0.13053961,1.0947031,"down","TUBGCP3",10426,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0000278 // mitotic cell cycle // traceable author statement /// 0007020 // microtubule nucleation // non-traceable author statement /// 0007020 // microtubule nucleation // inferred from electronic annotation /// 0007338 // single fertilization // non-traceable author statement","0000922 // spindle pole // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // non-traceable author statement /// 0005814 // centriole // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // non-traceable author statement /// 0005827 // polar microtubule // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation","0005198 // structural molecule activity // non-traceable author statement /// 0005200 // structural constituent of cytoskeleton // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043015 // gamma-tubulin binding // inferred from direct assay","chr13:113139322-113242499 (-) // 99.44 // q34"]
["11750603_x_at",106.752556,110.11975,111.18066,101.24123,113.65501,108.41559,-0.03355217,0.011250973,0.025083065,-0.11002588,0.056838512,-0.011250973,0.87507945,0.6863514,1.0156524,0.022406759,1.0156524,"up","PLEKHG5",57449,"0006915 // apoptotic process // traceable author statement /// 0007165 // signal transduction // inferred from mutant phenotype /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype /// 0043542 // endothelial cell migration // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0004871 // signal transducer activity // inferred from mutant phenotype /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation","chr1:6527564-6557156 (-) // 98.02 // p36.31"]
["11735603_a_at",55.057453,48.14501,42.817772,49.168236,46.876724,48.463745,0.18879128,-0.0047597885,-0.17393637,0.025580406,-0.043274403,0.0047597885,0.9813522,0.94612724,1.0053351,0.0076764524,1.0053351,"up","OSBPL7",114881,"0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation","","0005543 // phospholipid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation","chr17:45884737-45899147 (-) // 99.32 // q21.32"]
["11742072_a_at",622.0347,546.3997,599.0462,505.29825,418.96384,413.502,0.24344921,0.05641079,0.18912125,-0.05641079,-0.32672024,-0.34565163,0.16309834,0.020212926,1.3249347,0.40592128,1.3249347,"up","PBX3",5090,"0002087 // regulation of respiratory gaseous exchange by neurological system process // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007387 // anterior compartment pattern formation // traceable author statement /// 0007388 // posterior compartment specification // traceable author statement /// 0007585 // respiratory gaseous exchange // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0021516 // dorsal spinal cord development // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr9:128510477-128729653 (+) // 98.62 // q33.3"]
["11760569_at",9.225798,10.9083605,10.068401,9.406102,12.573475,11.73363,-0.18388891,0.057799578,-0.057799816,-0.15596557,0.26274896,0.16301489,0.6665299,0.3537125,-1.1105152,-0.15122919,1.1105152,"down","EPGN",255324,"0000165 // MAPK cascade // inferred from sequence or structural similarity /// 0000187 // activation of MAPK activity // inferred from sequence or structural similarity /// 0001525 // angiogenesis // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0045741 // positive regulation of epidermal growth factor-activated receptor activity // inferred from direct assay /// 0045840 // positive regulation of mitosis // inferred from direct assay /// 0050679 // positive regulation of epithelial cell proliferation // inferred from sequence or structural similarity","0005576 // extracellular region // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004708 // MAP kinase kinase activity // inferred from sequence or structural similarity /// 0005154 // epidermal growth factor receptor binding // inferred from direct assay /// 0008083 // growth factor activity // inferred from direct assay /// 0008083 // growth factor activity // inferred from electronic annotation","chr4:75174189-75181669 (+) // 84.58 // q13.3"]
["200028_PM_s_at",1466.5916,1521.7665,1493.1188,2118.221,2128.0073,2260.2314,-0.29183292,-0.23855305,-0.26597118,0.23855305,0.24520302,0.3321705,0.017883934,9.203813e-5,-1.4513826,-0.5374279,1.4513826,"down","STARD7",56910,"","0005739 // mitochondrion // inferred from electronic annotation","","chr2:96850604-96874508 (-) // 95.78 // q11.2"]
["11747403_a_at",16.961258,16.753881,14.240744,13.712462,15.955571,14.240744,0.17020082,0.15245295,-0.0820179,-0.13655496,0.0820179,-0.0820179,0.6151533,0.2952517,1.0910599,0.12573034,1.0910599,"up","PTPN5",84867,"0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0001784 // phosphotyrosine binding // inferred from direct assay /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr11:18749482-18813348 (-) // 92.56 // p15.1"]
["11738783_at",14.345354,15.896968,15.598197,18.289444,16.481243,17.400991,-0.17420483,-0.026036978,-0.05340886,0.1762228,0.02603674,0.104381084,0.23257752,0.0411202,-1.1382077,-0.18676381,1.1382077,"down","HIST1H3A /// HIST1H3B /// HIST1H3C /// HIST1H3D /// HIST1H3E /// HIST1H3F /// HIST1H3G /// HIST1H3H /// HIST1H3I /// HIST1H3J","8350 /// 8351 /// 8352 /// 8353 /// 8354 /// 8355 /// 8356 /// 8357 /// 8358 /// 8968","0006334 // nucleosome assembly // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0051320 // S phase // non-traceable author statement /// 0060968 // regulation of gene silencing // inferred from direct assay","0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:26045611-26046166 (+) // 99.28 // p22.2"]
["11732246_a_at",219.8895,262.66928,261.16833,291.8461,313.5227,295.60077,-0.33244896,-0.07598019,-0.08424759,0.07598019,0.17934227,0.09442234,0.21574968,0.035481185,-1.2148744,-0.28080714,1.2148744,"down","HNRNPC /// LOC100652761 /// LOC100653343","100652761 /// 100653343 /// 3183","0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0045120 // pronucleus // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction","chr14:21677305-21737638 (-) // 95.15 // q11.2"]
["11753709_x_at",30.046368,32.834095,28.692728,38.076332,30.71398,35.89647,-0.07985449,0.048149586,-0.14635992,0.2618494,-0.048149586,0.17679691,0.45357886,0.15611488,-1.1403847,-0.18952055,1.1403847,"down","CIDEC",63924,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay","","chr3:9908746-9920172 (-) // 99.77 // p25.3"]
["11733352_a_at",82.574684,65.90029,73.98203,74.392876,70.99354,68.93095,0.18826771,-0.13714647,0.029743195,0.037733078,-0.029743671,-0.07227945,0.8576919,0.6514412,1.0341065,0.048384763,1.0341065,"up","NF2",4771,"0001707 // mesoderm formation // inferred from electronic annotation /// 0001953 // negative regulation of cell-matrix adhesion // traceable author statement /// 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0007398 // ectoderm development // inferred from electronic annotation /// 0008156 // negative regulation of DNA replication // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0014010 // Schwann cell proliferation // inferred from mutant phenotype /// 0022408 // negative regulation of cell-cell adhesion // inferred from direct assay /// 0030036 // actin cytoskeleton organization // inferred from mutant phenotype /// 0030336 // negative regulation of cell migration // traceable author statement /// 0035330 // regulation of hippo signaling cascade // inferred from mutant phenotype /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042518 // negative regulation of tyrosine phosphorylation of Stat3 protein // inferred from direct assay /// 0042524 // negative regulation of tyrosine phosphorylation of Stat5 protein // inferred from direct assay /// 0043409 // negative regulation of MAPK cascade // inferred from electronic annotation /// 0045216 // cell-cell junction organization // inferred from electronic annotation /// 0046426 // negative regulation of JAK-STAT cascade // inferred from direct assay /// 0051496 // positive regulation of stress fiber assembly // inferred from mutant phenotype /// 0070306 // lens fiber cell differentiation // inferred from electronic annotation","0001726 // ruffle // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019898 // extrinsic to membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0030864 // cortical actin cytoskeleton // inferred from electronic annotation /// 0031527 // filopodium membrane // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation","chr22:29999544-30094583 (+) // 84.95 // q12.2"]
["11723163_s_at",12.98371,12.511597,12.368582,16.168653,13.848268,15.016268,-0.046501637,-0.099938154,-0.11652398,0.26999545,0.046501637,0.16332221,0.17009187,0.02184903,-1.1872258,-0.24759437,1.1872258,"down","NR3C2",4306,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006883 // cellular sodium ion homeostasis // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007588 // excretion // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0031959 // mineralocorticoid receptor signaling pathway // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // traceable author statement /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005496 // steroid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0017082 // mineralocorticoid receptor activity // inferred from electronic annotation /// 0042562 // hormone binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr4:148999914-149363672 (-) // 96.64 // q31.23"]
["11723038_at",77.39928,76.367836,77.04445,86.55618,88.5048,84.72733,-0.065253735,-0.084608555,-0.0718832,0.09606266,0.12818146,0.065253735,0.03844363,0.00086090044,-1.1253817,-0.17041442,1.1253817,"down","SRSF3",6428,"0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043274 // phospholipase binding // inferred from electronic annotation","chr6:36562089-36572244 (+) // 95.77 // p21.31"]
["11721588_at",21.640827,17.747288,21.19874,21.19874,20.622461,26.04312,0.02977705,-0.25638008,0,0,-0.03976202,0.29692364,0.63126075,0.312838,-1.1182594,-0.16125493,1.1182594,"down","TRAF1",7185,"0006461 // protein complex assembly // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from direct assay /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from reviewed computational analysis /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay","0005737 // cytoplasm // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0031996 // thioesterase binding // inferred from physical interaction","chr9:123664431-123691047 (-) // 83.42 // q33.2"]
["11722851_at",87.20746,89.54044,81.95679,109.22492,99.39483,87.556175,-0.021922588,0.016165257,-0.11151028,0.30285645,0.16679668,-0.016165257,0.41416338,0.12949683,-1.1409628,-0.1902518,1.1409628,"down","BIRC3",330,"0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0034121 // regulation of toll-like receptor signaling pathway // traceable author statement /// 0038061 // NIK/NF-kappaB cascade // traceable author statement /// 0039535 // regulation of RIG-I signaling pathway // traceable author statement /// 0042326 // negative regulation of phosphorylation // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0045088 // regulation of innate immune response // traceable author statement /// 0050727 // regulation of inflammatory response // traceable author statement /// 0060546 // negative regulation of necroptosis // inferred from electronic annotation /// 0070266 // necroptosis // inferred from electronic annotation /// 0070424 // regulation of nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement /// 2000116 // regulation of cysteine-type endopeptidase activity // traceable author statement /// 2000378 // negative regulation of reactive oxygen species metabolic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:102188127-102209250 (+) // 88.29 // q22.2"]
["11733709_s_at",1605.6534,1478.7094,1424.3892,1450.4943,1301.7677,1321.108,0.1597166,0.04089451,-0.013100624,0.013100624,-0.14297199,-0.12169552,0.37681141,0.10708488,1.1067728,0.14635907,1.1067728,"up","TMEM189 /// TMEM189-UBE2V1 /// UBE2V1","387521 /// 387522 /// 7335","0000209 // protein polyubiquitination // traceable author statement /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0006282 // regulation of DNA repair // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0030154 // cell differentiation // non-traceable author statement /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement /// 0070534 // protein K63-linked ubiquitination // inferred from direct assay","0000151 // ubiquitin ligase complex // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031371 // ubiquitin conjugating enzyme complex // inferred from direct assay /// 0035370 // UBC13-UEV1A complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation","chr20:48697660-48732494 (-) // 87.97 // q13.13"]
["11718979_a_at",1994.9677,1832.4579,1893.8431,1584.4092,1588.3647,1408.1127,0.2257042,0.1031189,0.15065575,-0.106716156,-0.1031189,-0.27689838,0.10960957,0.008846132,1.2501236,0.32207075,1.2501236,"up","HTATIP2",10553,"0001525 // angiogenesis // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0006917 // induction of apoptosis // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045765 // regulation of angiogenesis // inferred from direct assay /// 0051170 // nuclear import // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation","chr11:20385342-20405414 (+) // 88.14 // p15.1"]
["11725032_a_at",252.94708,231.46933,226.80952,193.70422,199.81386,239.89607,0.14268446,0.014669895,-0.014669895,-0.24229622,-0.1974945,0.06625891,0.49262625,0.18535194,1.1266755,0.17207204,1.1266755,"up","TPP1",1200,"0006508 // proteolysis // inferred from mutant phenotype /// 0006508 // proteolysis // inferred from electronic annotation /// 0006629 // lipid metabolic process // traceable author statement /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007040 // lysosome organization // inferred from sequence or structural similarity /// 0007040 // lysosome organization // inferred from electronic annotation /// 0007399 // nervous system development // inferred from mutant phenotype /// 0008219 // cell death // inferred from electronic annotation /// 0030163 // protein catabolic process // non-traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0043171 // peptide catabolic process // inferred from mutant phenotype /// 0045453 // bone resorption // inferred from mutant phenotype /// 0050885 // neuromuscular process controlling balance // inferred from sequence or structural similarity /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from mutant phenotype /// 0005764 // lysosome // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043202 // lysosomal lumen // traceable author statement","0004175 // endopeptidase activity // inferred from direct assay /// 0004175 // endopeptidase activity // inferred from mutant phenotype /// 0004175 // endopeptidase activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from mutant phenotype /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from mutant phenotype /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0008240 // tripeptidyl-peptidase activity // inferred from direct assay /// 0008240 // tripeptidyl-peptidase activity // inferred from mutant phenotype /// 0008240 // tripeptidyl-peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042277 // peptide binding // inferred from sequence or structural similarity /// 0042277 // peptide binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:6634073-6640660 (-) // 73.44 // p15.4"]
["11717295_s_at",43.409733,57.87529,55.941765,55.485973,55.531544,65.74928,-0.3605976,0.054331303,0.005309105,-0.0064926147,-0.005309105,0.23835897,0.6355945,0.31768787,-1.1296204,-0.17583808,1.1296204,"down","APOD",347,"0000302 // response to reactive oxygen species // inferred from direct assay /// 0000302 // response to reactive oxygen species // inferred from electronic annotation /// 0001525 // angiogenesis // non-traceable author statement /// 0006006 // glucose metabolic process // inferred from direct assay /// 0006629 // lipid metabolic process // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // non-traceable author statement /// 0007420 // brain development // inferred from sequence or structural similarity /// 0007568 // aging // non-traceable author statement /// 0010642 // negative regulation of platelet-derived growth factor receptor signaling pathway // inferred from direct assay /// 0014012 // peripheral nervous system axon regeneration // inferred from sequence or structural similarity /// 0042246 // tissue regeneration // inferred from sequence or structural similarity /// 0042308 // negative regulation of protein import into nucleus // inferred from direct assay /// 0042493 // response to drug // inferred from sequence or structural similarity /// 0048662 // negative regulation of smooth muscle cell proliferation // inferred from direct assay /// 0048678 // response to axon injury // inferred from sequence or structural similarity /// 0051895 // negative regulation of focal adhesion assembly // inferred from mutant phenotype /// 0060588 // negative regulation of lipoprotein lipid oxidation // inferred from direct assay /// 0060588 // negative regulation of lipoprotein lipid oxidation // inferred from electronic annotation /// 0071638 // negative regulation of monocyte chemotactic protein-1 production // inferred from direct assay /// 1900016 // negative regulation of cytokine production involved in inflammatory response // inferred from direct assay /// 2000098 // negative regulation of smooth muscle cell-matrix adhesion // inferred from mutant phenotype /// 2000405 // negative regulation of T cell migration // inferred from direct assay","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0022626 // cytosolic ribosome // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0043025 // neuronal cell body // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005215 // transporter activity // inferred from electronic annotation /// 0005319 // lipid transporter activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0015485 // cholesterol binding // inferred from direct assay /// 0036094 // small molecule binding // inferred from electronic annotation","chr3:195295609-195311083 (-) // 72.39 // q29"]
["11760540_at",9.198535,8.358591,7.6860423,8.295874,9.619672,8.566308,0.12043762,-0.017706871,-0.13872552,-0.02857256,0.18502116,0.01770711,0.7833678,0.5185187,-1.0497532,-0.07005017,1.0497532,"down","PTCHD4",442213,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008158 // hedgehog receptor activity // inferred from electronic annotation","chr6:47868630-48036389 (-) // 41.59 // p12.3"]
["11731508_a_at",9.85127,10.312281,8.826148,10.661271,10.461427,9.269338,-0.032990932,0.032990694,-0.19151664,0.081007004,0.053707123,-0.12083435,0.7697901,0.4974196,-1.0486008,-0.06846554,1.0486008,"down","ZNF649",65251,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:52392996-52408305 (-) // 61.01 // q13.41"]
["11740786_a_at",65.301025,61.646057,58.88997,60.378845,60.151295,61.088802,0.10462999,0.021533012,-0.04445362,-0.008432388,-0.013880253,0.008432388,0.77549857,0.5058678,1.0223316,0.031863213,1.0223316,"up","SYNM",23336,"0045104 // intermediate filament cytoskeleton organization // traceable author statement","0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005882 // intermediate filament // inferred from direct assay /// 0005882 // intermediate filament // non-traceable author statement /// 0005882 // intermediate filament // inferred from electronic annotation /// 0005912 // adherens junction // inferred from direct assay /// 0005912 // adherens junction // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043034 // costamere // inferred from direct assay /// 0060053 // neurofilament cytoskeleton // traceable author statement /// 0060053 // neurofilament cytoskeleton // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // inferred from expression pattern /// 0005515 // protein binding // inferred from physical interaction /// 0008307 // structural constituent of muscle // inferred from direct assay /// 0017166 // vinculin binding // inferred from direct assay /// 0019215 // intermediate filament binding // inferred from sequence or structural similarity /// 0019215 // intermediate filament binding // inferred from electronic annotation","chr15:99645285-99675800 (+) // 99.42 // q26.3"]
["11743264_x_at",4130.201,3386.2693,3303.294,4404.1377,3470.9436,3443.2646,0.2566595,-0.029855728,-0.065647125,0.34930706,0.0057754517,-0.0057754517,0.8848139,0.7061494,-1.0444307,-0.06271681,1.0444307,"down","C14orf2",9556,"","0005739 // mitochondrion // inferred from electronic annotation /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","","chr14:104378624-104387868 (-) // 66.41 // q32.33"]
["11733714_a_at",85.38192,77.38956,85.172165,101.450615,88.19696,83.52017,0.0017743111,-0.14001751,-0.0017747879,0.25054932,0.048572063,-0.030031204,0.5445131,0.22737774,-1.0991356,-0.13636942,1.0991356,"down","NAA16",79612,"0006474 // N-terminal protein amino acid acetylation // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity","0005634 // nucleus // inferred from sequence or structural similarity /// 0005667 // transcription factor complex // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity","0004872 // receptor activity // inferred from electronic annotation /// 0016407 // acetyltransferase activity // inferred from sequence or structural similarity /// 0043022 // ribosome binding // inferred from sequence or structural similarity","chr13:41885340-41932853 (+) // 97.59 // q14.11"]
["11737671_at",6.2908874,5.6108794,5.969134,7.1893373,6.138591,6.413346,0.017678022,-0.14735866,-0.058063984,0.21027327,-0.017678022,0.045491695,0.4627601,0.16247544,-1.1033908,-0.14194387,1.1033908,"down","GLB1L3",112937,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation","","0003824 // catalytic activity // inferred from electronic annotation /// 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0043169 // cation binding // inferred from electronic annotation","chr11:134146060-134189457 (+) // 84.64 // q25"]
["11725596_a_at",102.18798,100.875374,86.92875,124.725624,136.45464,124.26185,-0.14107895,-0.15972996,-0.3743987,0.14645338,0.27611732,0.14107943,0.11019575,0.008959331,-1.3314079,-0.41295263,1.3314079,"down","ZDHHC23",254887,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:113666747-113681829 (+) // 95.26 // q13.31"]
["11718242_a_at",24.518583,18.740828,18.583471,15.63047,19.062267,22.78724,0.37542343,-0.01226759,-0.024432182,-0.274091,0.01226759,0.26977396,0.8401474,0.6187633,1.079421,0.110257715,1.079421,"up","PRUNE2",158471,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from mutant phenotype /// 0051318 // G1 phase // inferred from expression pattern","0005737 // cytoplasm // inferred from electronic annotation","0016462 // pyrophosphatase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:79226292-79521136 (-) // 97.03 // q21.2"]
["11755548_a_at",104.64791,110.49001,100.169556,149.56586,130.55638,118.45013,-0.12855387,-0.05018139,-0.19165325,0.38668346,0.1905756,0.050181866,0.21367058,0.034736045,-1.2592894,-0.33260983,1.2592894,"down","OSBPL8",114882,"0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation","","0005543 // phospholipid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation","chr12:76749459-76879888 (-) // 99.85 // q21.2"]
["11762928_a_at",9.289946,7.9742556,8.15496,8.15496,8.186416,8.390157,0.18521523,-0.03510499,-0.0027770996,-0.0027770996,0.0027770996,0.038242817,0.8469375,0.6302816,1.0255256,0.036363464,1.0255256,"up","DNAJC18",202052,"0006457 // protein folding // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0031072 // heat shock protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr5:138778004-138842292 (-) // 70.66 // q31.2"]
["11762323_at",93.29691,89.49547,97.46256,79.12694,80.267075,99.85942,0.030007362,-0.030007362,0.09302616,-0.20765352,-0.1870141,0.12807703,0.66636676,0.35345295,1.0866387,0.11987232,1.0866387,"up","HCN3",57657,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0035725 // sodium ion transmembrane transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005249 // voltage-gated potassium channel activity // inferred from electronic annotation /// 0005267 // potassium channel activity // inferred from electronic annotation /// 0005272 // sodium channel activity // inferred from electronic annotation /// 0030552 // cAMP binding // inferred from electronic annotation","chr1:155247263-155248128 (+) // 98.74 // q22"]
["11740704_a_at",47.09353,45.53595,46.401283,49.99484,47.39963,42.31788,0.010682106,-0.037840843,-0.010682106,0.09693241,0.020029068,-0.14357948,0.98679584,0.9612121,-1.0025964,-0.0037409277,1.0025964,"down","ARID4A",5926,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement","chr14:58765221-58840444 (+) // 97.91 // q23.1"]
["11735556_at",60.743244,86.485634,91.70082,62.91357,70.86774,93.03932,-0.36607075,0.14366531,0.22813988,-0.3154235,-0.14366579,0.24904585,0.92012745,0.78762686,1.051119,0.07192597,1.051119,"up","AMZ1",155185,"0006508 // proteolysis // inferred from electronic annotation","","0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:2719155-2755069 (+) // 78.82 // p22.3"]
["11733968_a_at",9.406102,9.110005,8.045459,8.522398,9.15655,8.764075,0.074070215,0.027925014,-0.15135217,-0.068267345,0.03527713,-0.027925014,0.9868197,0.96152735,1.0026741,0.0038527658,1.0026741,"up","ELF5",2001,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007398 // ectoderm development // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0060644 // mammary gland epithelial cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr11:34500341-34535347 (-) // 93.66 // p13"]
["11726405_a_at",22.70894,22.770443,25.824118,24.041107,24.041107,28.379204,-0.082242966,-0.07834101,0.103215694,0,0,0.23933077,0.6875186,0.38094163,-1.0709563,-0.09889968,1.0709563,"down","ASPA",443,"0006533 // aspartate catabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0022010 // central nervous system myelination // inferred from electronic annotation /// 0048714 // positive regulation of oligodendrocyte differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0004046 // aminoacylase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation /// 0016811 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides // inferred from electronic annotation /// 0019807 // aspartoacylase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:3379278-3403196 (+) // 64.05 // p13.2"]
["11715700_s_at",471.5742,426.686,413.61572,548.1985,413.60507,411.5476,0.16675186,0.022441864,-0.022441864,0.3839655,-0.022479057,-0.029673576,0.8948778,0.7291576,-1.0388738,-0.055020396,1.0388738,"down","WDR6",11180,"0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0010507 // negative regulation of autophagy // inferred from mutant phenotype","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008180 // signalosome // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0043560 // insulin receptor substrate binding // inferred from electronic annotation","chr3:49044494-49053382 (+) // 98.27 // p21.31"]
["11756774_a_at",9.390248,10.158297,11.14633,10.077259,10.82781,10.731602,-0.15302682,-0.03960347,0.094306946,-0.051158667,0.052479267,0.03960347,0.8228902,0.5864422,-1.0326961,-0.046415802,1.0326961,"down","SPATA18",132671,"0006974 // response to DNA damage stimulus // inferred from direct assay /// 0033554 // cellular response to stress // inferred from direct assay /// 0035694 // mitochondrial protein catabolic process // inferred from mutant phenotype /// 0035695 // mitochondrion degradation by induced vacuole formation // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from mutant phenotype /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0044447 // axoneme part // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr4:52917626-52961210 (+) // 99.9 // q12"]
["11736476_a_at",53.14003,55.185112,57.048607,69.463615,61.056244,64.51961,-0.15136623,-0.09688616,-0.04897356,0.23509264,0.04897356,0.12857246,0.15533732,0.01833732,-1.1782303,-0.23662154,1.1782303,"down","TCHP",84260,"0006915 // apoptotic process // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0045095 // keratin filament // inferred from direct assay /// 0045179 // apical cortex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr12:110338027-110355873 (+) // 94.51 // q24.11"]
["11760690_at",15.498173,17.034918,12.375399,19.066723,17.37433,19.381163,-0.15062809,-0.014231205,-0.4752512,0.14833069,0.014231205,0.17192888,0.34337026,0.08900724,-1.252549,-0.3248671,1.252549,"down","VWA2",340706,"","0005576 // extracellular region // inferred from electronic annotation","","chr10:115999088-116051794 (+) // 98.73 // q25.3"]
["11742381_at",330.1838,392.43143,389.25668,361.6158,424.58005,452.5564,-0.24331188,0.005859375,-0.005859375,-0.11212349,0.11945534,0.21151638,0.60823095,0.28834727,-1.1126913,-0.15405338,1.1126913,"down","OR5H1",26341,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr3:97851541-97852483 (+) // 100.0 // q11.2 /// chr3:97887543-97888485 (+) // 97.13 // q11.2"]
["11718021_s_at",1715.8538,1877.354,1993.7653,2282.2036,2514.2256,2207.4526,-0.29001236,-0.16023827,-0.07344341,0.12148857,0.26117516,0.07344341,0.1541263,0.018026248,-1.2540548,-0.32660037,1.2540548,"down","SSFA2",6744,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // non-traceable author statement","0003779 // actin binding // inferred from electronic annotation","chr2:182756442-182795465 (+) // 95.51 // q31.3"]
["11743517_a_at",988.32263,923.6558,1005.2756,1330.8057,1365.8619,1199.5687,-0.15199947,-0.24962616,-0.12746239,0.27724648,0.3147583,0.12746239,0.07278874,0.0036692775,-1.3343943,-0.41618505,1.3343943,"down","NNT",23530,"0006099 // tricarboxylic acid cycle // traceable author statement /// 0015992 // proton transport // traceable author statement /// 0015992 // proton transport // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005746 // mitochondrial respiratory chain // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003957 // NAD(P)+ transhydrogenase (B-specific) activity // traceable author statement /// 0008746 // NAD(P)+ transhydrogenase activity // not recorded /// 0008750 // NAD(P)+ transhydrogenase (AB-specific) activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0050661 // NADP binding // inferred from direct assay /// 0050661 // NADP binding // inferred from electronic annotation /// 0051287 // NAD binding // traceable author statement","chr5:43602790-43706244 (+) // 97.83 // p12"]
["11748644_x_at",144.65732,132.47986,130.47469,136.54929,115.02881,130.27348,0.13786793,0.011001587,-0.011001587,0.054650307,-0.1927762,-0.01322794,0.64771044,0.33082774,1.0691078,0.09640729,1.0691078,"up","BCAR1",9564,"0001558 // regulation of cell growth // traceable author statement /// 0007015 // actin filament organization // inferred from direct assay /// 0007015 // actin filament organization // inferred from sequence or structural similarity /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0007173 // epidermal growth factor receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from sequence or structural similarity /// 0007186 // G-protein coupled receptor signaling pathway // non-traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from direct assay /// 0007229 // integrin-mediated signaling pathway // inferred from sequence or structural similarity /// 0007596 // blood coagulation // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0008286 // insulin receptor signaling pathway // inferred from electronic annotation /// 0016477 // cell migration // inferred from direct assay /// 0016477 // cell migration // inferred from electronic annotation /// 0016477 // cell migration // inferred from sequence or structural similarity /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from sequence or structural similarity /// 0035729 // cellular response to hepatocyte growth factor stimulus // inferred from mutant phenotype /// 0042981 // regulation of apoptotic process // traceable author statement /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from mutant phenotype /// 0048011 // nerve growth factor receptor signaling pathway // inferred from sequence or structural similarity /// 0048011 // nerve growth factor receptor signaling pathway // inferred from electronic annotation /// 0048012 // hepatocyte growth factor receptor signaling pathway // inferred from mutant phenotype /// 0050851 // antigen receptor-mediated signaling pathway // inferred from direct assay /// 0050851 // antigen receptor-mediated signaling pathway // inferred from sequence or structural similarity /// 0050852 // T cell receptor signaling pathway // non-traceable author statement /// 0050853 // B cell receptor signaling pathway // inferred from direct assay /// 0050853 // B cell receptor signaling pathway // inferred from sequence or structural similarity /// 0051301 // cell division // non-traceable author statement /// 0060326 // cell chemotaxis // inferred from mutant phenotype","0001726 // ruffle // inferred from direct assay /// 0001726 // ruffle // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from sequence or structural similarity /// 0005925 // focal adhesion // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019903 // protein phosphatase binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation","chr16:75263408-75300280 (-) // 98.48 // q23.1"]
["11750349_x_at",51.214558,48.133606,52.460964,41.67443,49.670418,48.054077,0.066838264,-0.022671223,0.101528645,-0.23055315,0.022671223,-0.025056839,0.53137434,0.21632567,1.0914239,0.1262115,1.0914239,"up","GRID1",2894,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0035235 // ionotropic glutamate receptor signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030288 // outer membrane-bounded periplasmic space // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004970 // ionotropic glutamate receptor activity // inferred from electronic annotation /// 0005215 // transporter activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005234 // extracellular-glutamate-gated ion channel activity // inferred from electronic annotation","chr10:87361733-87551316 (-) // 98.5 // q23.1"]
["11748747_a_at",18.286783,16.078964,19.002245,17.159351,20.355204,22.242674,-0.027684212,-0.2133112,0.027684212,-0.11949062,0.12691212,0.25484467,0.61535037,0.29547283,-1.116146,-0.1585257,1.116146,"down","ARHGAP25",9938,"0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation","chr2:68961974-69053434 (+) // 99.26 // p13.3"]
["11727608_x_at",308.80896,293.8029,284.00165,285.57245,278.30545,273.5562,0.11683655,0.044970512,-0.0039787292,0.0039787292,-0.033208847,-0.05804062,0.37680936,0.107065886,1.0582641,0.08169976,1.0582641,"up","OGG1",4968,"0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006281 // DNA repair // non-traceable author statement /// 0006284 // base-excision repair // traceable author statement /// 0006284 // base-excision repair // inferred from electronic annotation /// 0006285 // base-excision repair, AP site formation // traceable author statement /// 0006289 // nucleotide-excision repair // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0009314 // response to radiation // inferred from direct assay /// 0033158 // regulation of protein import into nucleus, translocation // inferred from direct assay /// 0045007 // depurination // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from direct assay /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from direct assay /// 0016607 // nuclear speck // inferred from electronic annotation","0003684 // damaged DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003906 // DNA-(apurinic or apyrimidinic site) lyase activity // inferred from electronic annotation /// 0004519 // endonuclease activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008534 // oxidized purine base lesion DNA N-glycosylase activity // inferred from electronic annotation /// 0008534 // oxidized purine base lesion DNA N-glycosylase activity // traceable author statement /// 0008534 // oxidized purine base lesion DNA N-glycosylase activity // non-traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation","chr3:9791627-9799197 (+) // 99.21 // p25.3"]
["11729086_a_at",68.59728,73.73609,71.86276,68.664154,66.71699,73.57255,-0.034249306,0.06997013,0.03284359,-0.032844067,-0.07434702,0.066767216,0.78520477,0.521753,1.0255014,0.03632942,1.0255014,"up","TBX19",9095,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0045165 // cell fate commitment // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation","chr1:168250277-168283285 (+) // 67.63 // q24.2"]
["11754966_a_at",126.76406,128.68805,111.98119,93.25918,75.620476,75.82934,0.31085873,0.33259106,0.13196945,-0.13196993,-0.43443823,-0.43045855,0.102290176,0.007598342,1.506042,0.590762,1.506042,"up","AIF1L",83543,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005884 // actin filament // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from direct assay","chr9:133971968-133998639 (+) // 88.18 // q34.12"]
["11759222_at",121.9156,115.05166,131.62854,127.37699,106.79324,126.895355,-0.028878212,-0.11247921,0.08171129,0.03434372,-0.21994066,0.028878212,0.9110193,0.7646706,1.022682,0.032357544,1.022682,"up","KIAA1958",158405,"","","","chr9:115249247-115427580 (+) // 91.92 // q32"]
["11747208_a_at",7.5074196,7.9948797,8.106085,8.296609,8.1835985,8.288874,-0.117553234,-0.026793957,-0.006865263,0.026651382,0.006865263,0.025305748,0.38747117,0.11347888,-1.0497252,-0.07001167,1.0497252,"down","MYSM1",114803,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016578 // histone deubiquitination // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0016585 // chromatin remodeling complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0004221 // ubiquitin thiolesterase activity // inferred from direct assay /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from mutant phenotype /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042393 // histone binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:59125396-59134578 (-) // 99.86 // p32.1"]
["11748549_a_at",84.59403,106.05093,110.492386,97.38277,118.7672,112.58894,-0.35572433,-0.029594898,0.029594898,-0.15261412,0.13378477,0.056713104,0.7186341,0.42317867,-1.0952064,-0.13120276,1.0952064,"down","ZDHHC17",23390,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype /// 0015693 // magnesium ion transport // inferred from direct assay /// 0018345 // protein palmitoylation // inferred from electronic annotation /// 0042953 // lipoprotein transport // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype","0000139 // Golgi membrane // inferred from direct assay /// 0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0030660 // Golgi-associated vesicle membrane // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0004871 // signal transducer activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0015095 // magnesium ion transmembrane transporter activity // inferred from direct assay /// 0016409 // palmitoyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0019706 // protein-cysteine S-palmitoleyltransferase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:77157882-77220796 (+) // 100.0 // q21.2"]
["11755406_x_at",297.0878,316.85294,281.7244,263.40738,271.2216,300.32465,0.03830242,0.13122654,-0.03830242,-0.1352911,-0.09311485,0.053936005,0.5675384,0.24815999,1.0731851,0.10189891,1.0731851,"up","NPLOC4",55666,"0006944 // cellular membrane fusion // inferred from sequence or structural similarity /// 0006944 // cellular membrane fusion // inferred from electronic annotation /// 0007030 // Golgi organization // inferred from sequence or structural similarity /// 0007030 // Golgi organization // inferred from electronic annotation /// 0030433 // ER-associated protein catabolic process // inferred from sequence or structural similarity /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0042175 // nuclear outer membrane-endoplasmic reticulum membrane network // inferred from sequence or structural similarity","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:79525644-79526819 (-) // 81.11 // q25.3"]
["11724236_a_at",308.87204,266.56525,270.03607,271.01172,241.57701,237.68886,0.2031889,-0.009331703,0.009331703,0.01453495,-0.15133715,-0.17474604,0.415347,0.13042712,1.1262906,0.17157906,1.1262906,"up","RIPK2",8767,"0000187 // activation of MAPK activity // traceable author statement /// 0001961 // positive regulation of cytokine-mediated signaling pathway // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002250 // adaptive immune response // inferred from sequence or structural similarity /// 0002250 // adaptive immune response // inferred from electronic annotation /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006916 // anti-apoptosis // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB cascade // inferred from sequence or structural similarity /// 0007249 // I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0007254 // JNK cascade // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0031398 // positive regulation of protein ubiquitination // inferred from mutant phenotype /// 0031663 // lipopolysaccharide-mediated signaling pathway // inferred from electronic annotation /// 0032722 // positive regulation of chemokine production // inferred from electronic annotation /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0032743 // positive regulation of interleukin-2 production // inferred from electronic annotation /// 0032755 // positive regulation of interleukin-6 production // inferred from electronic annotation /// 0032760 // positive regulation of tumor necrosis factor production // inferred from electronic annotation /// 0032874 // positive regulation of stress-activated MAPK cascade // inferred from electronic annotation /// 0033091 // positive regulation of immature T cell proliferation // inferred from electronic annotation /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // inferred from direct assay /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // inferred from electronic annotation /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0042098 // T cell proliferation // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0043330 // response to exogenous dsRNA // inferred from electronic annotation /// 0045087 // innate immune response // inferred from sequence or structural similarity /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0045627 // positive regulation of T-helper 1 cell differentiation // inferred from electronic annotation /// 0046330 // positive regulation of JNK cascade // inferred from electronic annotation /// 0046641 // positive regulation of alpha-beta T cell proliferation // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation /// 0050852 // T cell receptor signaling pathway // inferred from sequence or structural similarity /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0050852 // T cell receptor signaling pathway // inferred from electronic annotation /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from electronic annotation /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from electronic annotation /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement /// 0070427 // nucleotide-binding oligomerization domain containing 1 signaling pathway // inferred from electronic annotation /// 0070431 // nucleotide-binding oligomerization domain containing 2 signaling pathway // inferred from electronic annotation /// 0070555 // response to interleukin-1 // inferred from electronic annotation /// 0070671 // response to interleukin-12 // inferred from electronic annotation /// 0070673 // response to interleukin-18 // inferred from electronic annotation /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation /// 0071223 // cellular response to lipoteichoic acid // inferred from electronic annotation /// 0071224 // cellular response to peptidoglycan // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0030274 // LIM domain binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0050700 // CARD domain binding // inferred from direct assay /// 0050700 // CARD domain binding // inferred from physical interaction","chr8:90769960-90803292 (+) // 97.09 // q21.3"]
["11743158_at",584.18823,543.9448,555.535,604.8193,545.49786,511.088,0.085707664,-0.01726532,0.0131521225,0.13577843,-0.0131521225,-0.10715389,0.9208683,0.78900456,1.0153947,0.022040617,1.0153947,"up","GTF2F2",2963,"0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from electronic annotation /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006370 // 7-methylguanosine mRNA capping // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0050434 // positive regulation of viral transcription // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005674 // transcription factor TFIIF complex // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr13:45694596-45858613 (+) // 98.34 // q14.12"]
["11746273_x_at",105.31161,99.074585,100.832405,93.0866,93.14301,89.05625,0.1326108,0.044533253,0.06990528,-0.04540825,-0.04453373,-0.10926485,0.12489479,0.011719554,1.1086102,0.14875212,1.1086102,"up","DUS4L",11062,"0008033 // tRNA processing // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","","0003824 // catalytic activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0017150 // tRNA dihydrouridine synthase activity // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation","chr7:107204401-107218750 (+) // 93.76 // q22.3"]
["11737005_a_at",7.735631,8.277323,7.1328216,9.558639,8.263036,7.8188305,-0.05529332,0.04235196,-0.17233944,0.24999285,0.039859533,-0.039859533,0.56384677,0.24445346,-1.1058006,-0.1450913,1.1058006,"down","ZNF782",158431,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:99578672-99616770 (-) // 95.74 // q22.33"]
["11720113_at",440.47607,543.709,534.1093,430.8493,560.9121,554.4018,-0.2909212,0.012849808,-0.012849808,-0.3228016,0.057789803,0.04094696,0.96269244,0.89445907,-1.0155671,-0.022285514,1.0155671,"down","SNTB2",6645,"","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0016010 // dystrophin-associated glycoprotein complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030658 // transport vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation","chr16:69221010-69342954 (+) // 86.23 // q22.1"]
["11731029_a_at",14.57398,21.855846,20.7615,16.453318,17.71704,22.099823,-0.39612913,0.18849516,0.11438656,-0.22114563,-0.11438656,0.20451069,0.98543245,0.9578461,1.0087658,0.012591294,1.0087658,"up","SLC25A18",83733,"0006810 // transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0015293 // symporter activity // inferred from electronic annotation","chr22:18043138-18073651 (+) // 94.34 // q11.21"]
["11721059_a_at",171.04916,162.56662,149.64705,195.13055,186.2404,187.01479,-0.061377525,-0.13475752,-0.25422525,0.12865114,0.061377525,0.06736374,0.15066957,0.017234195,-1.1776555,-0.23591751,1.1776555,"down","ZNF189",7743,"0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:104161135-104172935 (+) // 99.0 // q31.1"]
["11722875_s_at",147.88951,127.462906,134.22282,137.70238,135.42403,118.13804,0.13346338,-0.08097935,-0.006426811,0.030496597,0.006427288,-0.19058323,0.7833468,0.51831406,1.0472256,0.066572264,1.0472256,"up","LRBA",987,"","0005764 // lysosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation","","chr4:151185609-151936879 (-) // 98.7 // q31.3"]
["11754523_a_at",2246.48,2348.5437,2244.7878,2684.7349,2480.6765,2363.6792,-0.06873417,-0.0046339035,-0.06982136,0.18837929,0.07433319,0.0046339035,0.31818786,0.07677908,-1.0994983,-0.13684534,1.0994983,"down","DPM1",8813,"0006486 // protein glycosylation // inferred from electronic annotation /// 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0006501 // C-terminal protein lipidation // traceable author statement /// 0006506 // GPI anchor biosynthetic process // inferred from direct assay /// 0006506 // GPI anchor biosynthetic process // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0019348 // dolichol metabolic process // inferred from direct assay /// 0019348 // dolichol metabolic process // inferred from electronic annotation /// 0019673 // GDP-mannose metabolic process // inferred from electronic annotation /// 0035268 // protein mannosylation // inferred from direct assay /// 0035269 // protein O-linked mannosylation // inferred from direct assay /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0033185 // dolichol-phosphate-mannose synthase complex // inferred from direct assay","0004169 // dolichyl-phosphate-mannose-protein mannosyltransferase activity // inferred from direct assay /// 0004582 // dolichyl-phosphate beta-D-mannosyltransferase activity // inferred from direct assay /// 0004582 // dolichyl-phosphate beta-D-mannosyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005537 // mannose binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0043178 // alcohol binding // inferred from electronic annotation","chr20:49551410-49575039 (-) // 74.03 // q13.13"]
["11755907_a_at",546.6219,511.57507,471.7831,533.02405,509.2696,518.7152,0.085598946,-0.0099983215,-0.12682056,0.049256325,-0.016514778,0.0099983215,0.85777825,0.6518038,-1.0219467,-0.03131991,1.0219467,"down","ATP13A1",57130,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:19756011-19774878 (-) // 97.98 // p13.11"]
["11747464_a_at",854.9705,873.09033,870.6334,772.5839,730.9882,714.23315,0.07309151,0.10334778,0.099282265,-0.07309151,-0.15293503,-0.18638802,0.06432649,0.0027790815,1.17233,0.22937876,1.17233,"up","SERINC3",10955,"0006917 // induction of apoptosis // inferred from electronic annotation","0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","","chr20:43128607-43150737 (-) // 99.95 // q13.12"]
["11724635_at",651.3896,791.8894,828.9388,723.65625,736.41925,661.6649,-0.16439533,0.117383,0.18334961,-0.012611389,0.012611389,-0.14181519,0.7526144,0.47198418,1.0663769,0.09271747,1.0663769,"up","YOD1",55432,"0006508 // proteolysis // inferred from electronic annotation /// 0006520 // cellular amino acid metabolic process // inferred from sequence or structural similarity /// 0006986 // response to unfolded protein // inferred from electronic annotation /// 0030433 // ER-associated protein catabolic process // inferred from mutant phenotype /// 0030968 // endoplasmic reticulum unfolded protein response // inferred from mutant phenotype /// 0070536 // protein K63-linked deubiquitination // inferred from direct assay /// 0071108 // protein K48-linked deubiquitination // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation","0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:207217193-207224553 (-) // 98.23 // q32.2"]
["11737959_at",8.5134945,9.632171,11.769663,10.766999,9.824027,11.472114,-0.2726779,-0.09456849,0.19457197,0.0661149,-0.0661149,0.15762997,0.7755177,0.505896,-1.0793041,-0.11010141,1.0793041,"down","SCGB1D4",404552,"","0005576 // extracellular region // inferred from electronic annotation","","chr11:62063748-62066536 (-) // 100.0 // q12.3"]
["11750688_a_at",12.424421,15.612974,15.037416,16.3061,15.891152,20.880304,-0.3423059,-0.01273942,-0.06692791,0.049927235,0.0127391815,0.40665817,0.4304394,0.14020325,-1.2286716,-0.2970993,1.2286716,"down","EFR3B",22979,"","","","chr2:25338855-25377434 (+) // 96.12 // p23.3"]
["11730348_at",176.05621,206.5562,203.1307,195.05621,195.74673,215.22289,-0.17966127,0.050836563,0.026710033,-0.0318079,-0.026709557,0.11013365,0.82271254,0.5861338,-1.0361577,-0.05124363,1.0361577,"down","KIAA1609",57707,"","","0005515 // protein binding // inferred from physical interaction","chr16:84509965-84538364 (-) // 82.02 // q24.1"]
["11762498_at",16.279913,15.452472,18.46429,18.100498,17.791924,19.520508,-0.14053297,-0.21578836,0.041111946,0.012403488,-0.012403488,0.12136459,0.469867,0.16822751,-1.1061329,-0.14552468,1.1061329,"down",0.041111946,"","","0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation","0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation"]
["11725084_a_at",1195.0881,1155.5906,1152.2953,1176.1138,1110.76,1096.0746,0.050546646,0.0020599365,-0.0020599365,0.027457237,-0.055023193,-0.07422447,0.54224455,0.22551534,1.0358241,0.050778974,1.0358241,"up","UCHL5",51377,"0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from mutant phenotype /// 0016579 // protein deubiquitination // inferred from direct assay /// 0021670 // lateral ventricle development // inferred from electronic annotation /// 0030901 // midbrain development // inferred from electronic annotation /// 0048853 // forebrain morphogenesis // inferred from electronic annotation /// 0061136 // regulation of proteasomal protein catabolic process // inferred from mutant phenotype","0000502 // proteasome complex // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0031011 // Ino80 complex // inferred from direct assay","0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0004866 // endopeptidase inhibitor activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0008242 // omega peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0070628 // proteasome binding // inferred from direct assay","chr1:192984074-193028521 (-) // 99.88 // q31.2"]
["11754821_s_at",2452.0251,2580.9814,2580.2375,3132.194,3005.57,3117.252,-0.18380547,-0.10985947,-0.11027527,0.1693945,0.10985947,0.16249561,0.037290823,0.00080553314,-1.2157922,-0.28189665,1.2157922,"down","SLC38A1",81539,"0001504 // neurotransmitter uptake // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006865 // amino acid transport // traceable author statement /// 0006865 // amino acid transport // inferred from electronic annotation /// 0006868 // glutamine transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0015804 // neutral amino acid transport // non-traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation","0005283 // sodium:amino acid symporter activity // non-traceable author statement /// 0015175 // neutral amino acid transmembrane transporter activity // non-traceable author statement /// 0015186 // L-glutamine transmembrane transporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation","chr12:46581565-46662782 (-) // 92.55 // q13.11"]
["11738543_a_at",14.384724,14.50096,12.326188,15.3141775,12.682001,15.68919,-0.0058054924,0.0058054924,-0.22861624,0.08452487,-0.18756056,0.11942768,0.79856944,0.5443531,-1.0582418,-0.08166937,1.0582418,"down","TFAP2D",83741,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation","chr6:50681256-50740746 (+) // 97.5 // p12.3"]
["11730391_at",36.88033,42.040787,44.720352,35.157993,42.6901,37.15073,-0.0997386,0.08919954,0.17834139,-0.16873741,0.111311436,-0.08919954,0.71713156,0.4205859,1.0753522,0.10480924,1.0753522,"up","SEMA3A",10371,"0002027 // regulation of heart rate // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0007413 // axonal fasciculation // inferred from electronic annotation /// 0010633 // negative regulation of epithelial cell migration // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030517 // negative regulation of axon extension // inferred from electronic annotation /// 0048485 // sympathetic nervous system development // traceable author statement /// 0048841 // regulation of axon extension involved in axon guidance // inferred from direct assay /// 0048841 // regulation of axon extension involved in axon guidance // inferred from electronic annotation /// 0048843 // negative regulation of axon extension involved in axon guidance // inferred from electronic annotation /// 0048880 // sensory system development // traceable author statement /// 0050919 // negative chemotaxis // traceable author statement /// 0050919 // negative chemotaxis // inferred from electronic annotation /// 0060666 // dichotomous subdivision of terminal units involved in salivary gland branching // inferred from electronic annotation /// 0071526 // semaphorin-plexin signaling pathway // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0045499 // chemorepellent activity // traceable author statement /// 0045499 // chemorepellent activity // inferred from electronic annotation","chr7:83587074-83824459 (-) // 97.23 // q21.11"]
["11716360_a_at",1799.9115,1805.2711,1783.9241,2155.705,2134.6953,2114.0146,-0.11817455,-0.113884926,-0.1310463,0.14205933,0.12792969,0.113884926,0.011624988,1.3292393e-5,-1.1883775,-0.24899319,1.1883775,"down","CNIH",10175,"0006810 // transport // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr14:54893104-54908149 (-) // 98.63 // q22.2"]
["11748782_a_at",1181.2031,1154.1531,1142.0701,1143.1018,976.18854,1058.0133,0.04795456,0.014532089,-0.00065135956,0.00065135956,-0.22707081,-0.11094475,0.3970636,0.11914668,1.0966221,0.13306646,1.0966221,"up","CASP9",842,"0006508 // proteolysis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008635 // activation of cysteine-type endopeptidase activity involved in apoptotic process by cytochrome c // traceable author statement /// 0009411 // response to UV // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0071549 // cellular response to dexamethasone stimulus // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0043293 // apoptosome // inferred from direct assay","0004197 // cysteine-type endopeptidase activity // inferred from electronic annotation /// 0004197 // cysteine-type endopeptidase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008047 // enzyme activator activity // traceable author statement /// 0008233 // peptidase activity // inferred from direct assay /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr1:15818860-15850695 (-) // 89.02 // p36.21"]
["11719089_a_at",108.145744,125.68769,117.549675,127.044,135.77863,133.56406,-0.2246089,-0.007742405,-0.10431528,0.007742405,0.103671074,0.07994604,0.28971,0.06335664,-1.1297541,-0.17600875,1.1297541,"down","PCK2",5106,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // inferred from electronic annotation /// 0006094 // gluconeogenesis // traceable author statement /// 0006107 // oxaloacetate metabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004611 // phosphoenolpyruvate carboxykinase activity // traceable author statement /// 0004611 // phosphoenolpyruvate carboxykinase activity // inferred from electronic annotation /// 0004613 // phosphoenolpyruvate carboxykinase (GTP) activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation /// 0017076 // purine nucleotide binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:24563346-24573339 (+) // 97.34 // q11.2"]
["200059_PM_s_at",6398.485,6615.682,6495.4365,6782.691,6575.4404,6648.5234,-0.043758392,0.004401207,-0.022062302,0.040369034,-0.004401207,0.011545181,0.4153218,0.13036343,-1.0254881,-0.036310803,1.0254881,"down","RHOA",387,"0000902 // cell morphogenesis // inferred from electronic annotation /// 0006184 // GTP catabolic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007266 // Rho protein signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0030036 // actin cytoskeleton organization // traceable author statement /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030334 // regulation of cell migration // inferred from mutant phenotype /// 0030521 // androgen receptor signaling pathway // inferred from electronic annotation /// 0033144 // negative regulation of intracellular steroid hormone receptor signaling pathway // inferred from electronic annotation /// 0033688 // regulation of osteoblast proliferation // inferred from sequence or structural similarity /// 0033688 // regulation of osteoblast proliferation // inferred from electronic annotation /// 0042346 // positive regulation of NF-kappaB import into nucleus // non-traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0043149 // stress fiber assembly // inferred from electronic annotation /// 0043297 // apical junction assembly // inferred from mutant phenotype /// 0043297 // apical junction assembly // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043931 // ossification involved in bone maturation // inferred from sequence or structural similarity /// 0043931 // ossification involved in bone maturation // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from mutant phenotype /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0050770 // regulation of axonogenesis // traceable author statement /// 0050771 // negative regulation of axonogenesis // traceable author statement /// 0050772 // positive regulation of axonogenesis // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051496 // positive regulation of stress fiber assembly // inferred from direct assay /// 0061383 // trabecula morphogenesis // inferred from sequence or structural similarity /// 0061383 // trabecula morphogenesis // inferred from electronic annotation /// 0071777 // positive regulation of cell cycle cytokinesis // inferred from mutant phenotype /// 0090307 // spindle assembly involved in mitosis // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005938 // cell cortex // inferred from direct assay /// 0005938 // cell cortex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030496 // midbody // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from direct assay /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0043296 // apical junction complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0017022 // myosin binding // inferred from physical interaction","chr3:49396929-49449362 (-) // 98.12 // p21.31"]
["11728549_at",14.710979,17.494778,13.530037,16.411074,15.035652,17.047451,-0.09463525,0.15539575,-0.21536255,0.06314111,-0.06314111,0.11802745,0.7691576,0.49653056,-1.065017,-0.09087644,1.065017,"down","ZNF536",9745,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0048387 // negative regulation of retinoic acid receptor signaling pathway // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0044323 // retinoic acid-responsive element binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:30863318-31048966 (+) // 99.06 // q12"]
["11749239_s_at",139.98209,132.54323,134.61636,135.625,149.75026,144.77867,0.022809505,-0.055969715,-0.033578873,-0.022809982,0.12012577,0.071416855,0.48292306,0.1777415,-1.0559127,-0.07849061,1.0559127,"down","ZNF672",79894,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:249132490-249142142 (+) // 41.24 // q44"]
["11721004_x_at",1405.6537,1479.1335,1516.0575,1428.2228,1740.9526,1588.263,-0.09129715,-0.017786026,0.017786026,-0.06831741,0.21733856,0.08491135,0.6080956,0.28808632,-1.0780394,-0.10840992,1.0780394,"down","HEXIM1",10614,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0045736 // negative regulation of cyclin-dependent protein kinase activity // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0004861 // cyclin-dependent protein kinase inhibitor activity // inferred from direct assay /// 0004861 // cyclin-dependent protein kinase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017069 // snRNA binding // inferred from direct assay /// 0017069 // snRNA binding // inferred from electronic annotation","chr17:43224683-43229585 (+) // 92.36 // q21.31"]
["11756750_a_at",35.34461,37.77732,41.384495,40.41123,43.675762,43.541805,-0.210433,-0.11440277,0.017167091,-0.017167091,0.09490967,0.09047794,0.3697397,0.10340779,-1.1162264,-0.15862972,1.1162264,"down","TMEM30B",161291,"0070863 // positive regulation of protein exit from endoplasmic reticulum // inferred from direct assay","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr14:61746589-61748194 (-) // 99.53 // q23.1"]
["11760197_at",51.228897,44.268654,38.74078,40.93865,47.480335,44.751446,0.20284796,-0.007824421,-0.20025682,-0.12064648,0.093220234,0.007824421,0.99088055,0.9727861,1.0033253,0.0047894972,1.0033253,"up","EIF4E2 /// LOC100507948","100507948 /// 9470","0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005845 // mRNA cap binding complex // inferred from direct assay","0000339 // RNA cap binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr2:233415383-233433919 (+) // 91.65 // q37.1"]
["11730530_at",84.59087,81.850044,83.24879,96.0562,91.722885,91.389565,-0.0557642,-0.10328293,-0.07883644,0.12761307,0.06101656,0.0557642,0.07545992,0.0039328774,-1.1178752,-0.16075915,1.1178752,"down","ZNF684",127396,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:40997232-41013841 (+) // 95.02 // p34.2"]
["11732453_s_at",9.9750185,12.737132,12.252527,11.56283,11.37932,11.988356,-0.2391727,0.11347628,0.057515383,-0.026069641,-0.04914975,0.026069641,0.9853897,0.957419,-1.0044068,-0.006343715,1.0044068,"down","HGD",3081,"0006520 // cellular amino acid metabolic process // inferred from electronic annotation /// 0006559 // L-phenylalanine catabolic process // inferred from electronic annotation /// 0006559 // L-phenylalanine catabolic process // traceable author statement /// 0006570 // tyrosine metabolic process // inferred from electronic annotation /// 0006572 // tyrosine catabolic process // inferred from electronic annotation /// 0006572 // tyrosine catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005829 // cytosol // traceable author statement","0004411 // homogentisate 1,2-dioxygenase activity // not recorded /// 0004411 // homogentisate 1,2-dioxygenase activity // inferred from electronic annotation /// 0004411 // homogentisate 1,2-dioxygenase activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:120347014-120401328 (-) // 92.98 // q13.33"]
["11720345_a_at",329.0112,347.6818,353.83203,325.0551,351.0466,336.12027,-0.055235863,0.024394989,0.049692154,-0.0726881,0.038290024,-0.024394989,0.8289089,0.59657276,1.0181016,0.0258815,1.0181016,"up","USP4",7375,"0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0016579 // protein deubiquitination // inferred from direct assay /// 0031397 // negative regulation of protein ubiquitination // inferred from mutant phenotype /// 0031647 // regulation of protein stability // inferred from direct assay /// 0034394 // protein localization at cell surface // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // traceable author statement","0004221 // ubiquitin thiolesterase activity // inferred from mutant phenotype /// 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0031685 // adenosine receptor binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:49314576-49377594 (-) // 99.76 // p21.31"]
["11715625_a_at",54.55453,50.061607,49.40072,55.58987,46.61595,49.952755,0.12556458,0.0015702248,-0.017602444,0.15268755,-0.10131073,-0.0015702248,0.9381041,0.82914764,1.0138953,0.019908642,1.0138953,"up","SH3BGRL",6451,"","0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // traceable author statement","0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0017124 // SH3 domain binding // inferred from electronic annotation","chrX:80457257-80554046 (+) // 94.05 // q21.1"]
["11726141_at",20.37189,17.281025,17.747915,18.758718,21.122654,23.659353,0.059509277,-0.17788172,-0.13942099,-0.059509277,0.11172056,0.27534008,0.4903909,0.18350816,-1.1448153,-0.19511488,1.1448153,"down","FMN2",56776,"0007132 // meiotic metaphase I // inferred from sequence or structural similarity /// 0007132 // meiotic metaphase I // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016043 // cellular component organization // inferred from electronic annotation /// 0016344 // meiotic chromosome movement towards spindle pole // inferred from sequence or structural similarity /// 0016344 // meiotic chromosome movement towards spindle pole // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0040038 // polar body extrusion after meiotic divisions // inferred from sequence or structural similarity /// 0040038 // polar body extrusion after meiotic divisions // inferred from electronic annotation /// 0048477 // oogenesis // inferred from sequence or structural similarity /// 0048477 // oogenesis // inferred from electronic annotation /// 0051295 // establishment of meiotic spindle localization // inferred from sequence or structural similarity /// 0051295 // establishment of meiotic spindle localization // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation","chr1:240255184-240638489 (+) // 98.08 // q43"]
["11745977_a_at",52.679756,37.63694,37.458347,37.46153,30.161247,37.96558,0.48846912,0.0033698082,-0.0034923553,-0.0033698082,-0.31608343,0.015912533,0.5671142,0.2476646,1.2007722,0.26396245,1.2007722,"up","SOX12",6666,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // non-traceable author statement /// 0021510 // spinal cord development // inferred from sequence or structural similarity /// 0045165 // cell fate commitment // inferred from expression pattern /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity","0005634 // nucleus // inferred from electronic annotation","0000976 // transcription regulatory region sequence-specific DNA binding // inferred from sequence or structural similarity /// 0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from sequence or structural similarity /// 0001105 // RNA polymerase II transcription coactivator activity // inferred from sequence or structural similarity /// 0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr20:306214-309161 (+) // 90.48 // p13"]
["11724574_a_at",323.72308,331.2018,315.4054,283.53494,305.90662,309.0299,0.052283287,0.08523369,0.0147304535,-0.13895035,-0.029385567,-0.0147304535,0.29252422,0.06462834,1.0805541,0.11177134,1.0805541,"up","ECE2",9718,"0006508 // proteolysis // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0007420 // brain development // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from sequence or structural similarity /// 0008152 // metabolic process // inferred from electronic annotation /// 0010002 // cardioblast differentiation // inferred from sequence or structural similarity /// 0016486 // peptide hormone processing // inferred from direct assay /// 0032259 // methylation // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from direct assay","0003824 // catalytic activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // inferred from direct assay /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:183967385-183977406 (+) // 93.77 // q27.1"]
["11729548_x_at",65.26695,64.222984,58.440784,105.768745,72.1149,72.556244,-0.07197237,-0.09523535,-0.23134947,0.624516,0.07197237,0.08077431,0.37692872,0.10726768,-1.3121567,-0.39194,1.3121567,"down","AMH",268,"0001541 // ovarian follicle development // inferred from electronic annotation /// 0001546 // preantral ovarian follicle growth // inferred from electronic annotation /// 0001655 // urogenital system development // inferred from electronic annotation /// 0001880 // Mullerian duct regression // inferred from direct assay /// 0001880 // Mullerian duct regression // non-traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007506 // gonadal mesoderm development // inferred from electronic annotation /// 0007530 // sex determination // traceable author statement /// 0007548 // sex differentiation // traceable author statement /// 0007568 // aging // inferred from electronic annotation /// 0008406 // gonad development // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from electronic annotation","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0005102 // receptor binding // inferred from physical interaction /// 0005160 // transforming growth factor beta receptor binding // inferred from electronic annotation /// 0005179 // hormone activity // traceable author statement /// 0008083 // growth factor activity // inferred from electronic annotation","chr19:2248693-2252071 (+) // 95.37 // p13.3"]
["11750295_a_at",121.72286,123.6778,113.66143,141.88954,135.22289,150.53915,-0.087362766,-0.064376354,-0.18622065,0.13380527,0.06437588,0.21917582,0.12867047,0.012475004,-1.1906688,-0.2517722,1.1906688,"down","CLEC11A",6320,"0008284 // positive regulation of cell proliferation // inferred from direct assay","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay","0008083 // growth factor activity // inferred from direct assay /// 0008083 // growth factor activity // inferred from electronic annotation /// 0030246 // carbohydrate binding // non-traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr19:51226779-51228975 (+) // 91.51 // q13.33"]
["11757381_x_at",2071.2622,1981.4097,2103.211,2105.7024,2348.0425,2022.1392,-0.011041641,-0.075024605,0.011041641,0.012749672,0.16990662,-0.045669556,0.67630774,0.36581272,-1.0502046,-0.07067046,1.0502046,"down","GTF2A2",2958,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from electronic annotation /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051123 // RNA polymerase II transcriptional preinitiation complex assembly // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005672 // transcription factor TFIIA complex // inferred from direct assay /// 0005672 // transcription factor TFIIA complex // inferred from electronic annotation","0003713 // transcription coactivator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0017025 // TBP-class protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from physical interaction","chr15:59931064-59934462 (-) // 87.11 // q22.2"]
["11718296_a_at",634.2268,505.7534,513.17236,582.8455,467.8925,461.6219,0.31606007,-0.010504723,0.010504723,0.19417477,-0.12276173,-0.14222717,0.7335437,0.44327453,1.0935037,0.12895812,1.0935037,"up","SEMA4B",10509,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr15:90728146-90772892 (+) // 95.09 // q26.1"]
["11760592_x_at",90.44107,114.19716,99.34931,88.77084,117.81825,113.29585,-0.23028898,0.1061883,-0.0947566,-0.2571807,0.15122461,0.09475613,0.8762575,0.6891558,-1.0491487,-0.06921914,1.0491487,"down","SLC35E1",79939,"0006810 // transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr19:16676163-16683020 (-) // 52.15 // p13.11"]
["11723232_x_at",671.2765,709.7863,744.1195,774.0751,791.363,718.6841,-0.12353897,-0.043061256,0.02508831,0.082027435,0.11389351,-0.02508831,0.4560935,0.15824537,-1.0748347,-0.10411481,1.0748347,"down","RNF138",51444,"0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr18:29671843-29711523 (+) // 95.8 // q12.1"]
["11754985_a_at",138.6589,156.08882,173.0562,156.22292,176.20087,165.95564,-0.215662,-0.04483509,0.104038715,-0.04359579,0.13001919,0.04359579,0.712652,0.4148949,-1.0684301,-0.09549248,1.0684301,"down","ZNF180",7733,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:44979620-45004575 (-) // 99.55 // q13.31"]
["200043_PM_at",6677.8887,6361.2207,6393.2,6470.0503,6072.064,6296.7256,0.066470146,-0.0036172867,0.0036172867,0.020856857,-0.07073498,-0.018320084,0.58450717,0.26461685,1.0316042,0.04488951,1.0316042,"up","ERH",2079,"0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0006213 // pyrimidine nucleoside metabolic process // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation","0030496 // midbody // inferred from direct assay","","chr14:69846845-69865021 (-) // 97.55 // q24.1"]
["11749650_x_at",8.75106,14.03797,11.2464075,9.269924,10.615921,12.908893,-0.3203175,0.3614874,0.041617393,-0.23721743,-0.041617393,0.24051833,0.9559608,0.875032,1.0283761,0.04036799,1.0283761,"up","A2ML1",144568,"0010466 // negative regulation of peptidase activity // inferred from direct assay /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // inferred from electronic annotation /// 0052548 // regulation of endopeptidase activity // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation","0004866 // endopeptidase inhibitor activity // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from direct assay /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chr12:8997599-9029052 (+) // 97.95 // p13.31"]
["11725037_a_at",162.22278,191.08385,195.48592,181.22275,171.23402,166.14284,-0.118890285,0.117339134,0.15019798,0.04089737,-0.04089737,-0.084442616,0.7369272,0.4476252,1.0553317,0.07769653,1.0553317,"up","SEC23IP",11196,"0006886 // intracellular protein transport // traceable author statement /// 0007030 // Golgi organization // traceable author statement","0005737 // cytoplasm // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0046872 // metal ion binding // inferred from electronic annotation","chr10:121652224-121701833 (+) // 95.15 // q26.11"]
["11741427_a_at",679.55804,669.7389,648.73096,562.40875,512.3416,498.68488,0.16997719,0.14897919,0.10300064,-0.10300064,-0.23751354,-0.27649117,0.071380325,0.0035086838,1.2713144,0.34632084,1.2713144,"up","OSBPL1A",114876,"0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // non-traceable author statement /// 0016192 // vesicle-mediated transport // non-traceable author statement","0005622 // intracellular // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from direct assay /// 0005770 // late endosome // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // non-traceable author statement /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation","chr18:21742012-21977846 (-) // 99.79 // q11.2"]
["11728735_a_at",758.77673,602.91595,614.3531,793.3895,558.7963,519.2298,0.31816292,-0.013555527,0.013555527,0.38251686,-0.123189926,-0.22913933,0.8719312,0.68058157,1.0687999,0.095991716,1.0687999,"up","ZBTB38",253461,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarity /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:141043054-141168630 (+) // 92.23 // q23"]
["AFFX-r2-Ec-bioB-3_at",644.7226,644.24335,627.5297,688.63745,505.51105,494.7225,0.020033836,0.018960953,-0.018960953,0.11509991,-0.3309021,-0.36202526,0.58652663,0.2670049,1.1481309,0.19928713,1.1481309,"up",-0.018960953,"","","0008152 // metabolic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009102 // biotin biosynthetic process // inferred from direct assay /// 0009102 // biotin biosynthetic process // inferred from electronic annotation /// 0009102 // biotin biosynthetic process // inferred from mutant phenotype /// 0032259 // methylation // inferred from electronic annotation /// 0051186 // cofactor metabolic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004015 // adenosylmethionine-8-amino-7-oxononanoate transaminase activity // inferred from direct assay /// 0004015 // adenosylmethionine-8-amino-7-oxononanoate transaminase activity // inferred from electronic annotation /// 0004076 // biotin synthase activity // inferred from direct assay /// 0004076 // biotin synthase activity // inferred from electronic annotation /// 0004141 // dethiobiotin synthase activity // inferred from direct assay /// 0004141 // dethiobiotin synthase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008483 // transaminase activity // inferred from electronic annotation /// 0008710 // 8-amino-7-oxononanoate synthase activity // inferred from direct assay /// 0008710 // 8-amino-7-oxononanoate synthase activity // inferred from electronic annotation /// 0010340 // carboxyl-O-methyltransferase activity // inferred from mutant phenotype /// 0016740 // transferase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from direct assay /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from direct assay /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from direct assay /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation"]
["11755655_a_at",17.470404,14.687858,14.696871,15.740258,16.964544,15.813339,0.14711237,-0.103176355,-0.102291346,-0.0033416748,0.10472202,0.0033414364,0.8188972,0.5797351,-1.0383977,-0.05435905,1.0383977,"down","MICAL3",57553,"0006887 // exocytosis // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0030042 // actin filament depolymerization // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0003779 // actin binding // inferred from sequence or structural similarity /// 0003779 // actin binding // inferred from electronic annotation /// 0004497 // monooxygenase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016709 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0071949 // FAD binding // inferred from sequence or structural similarity","chr22:18273602-18298435 (-) // 88.81 // q11.21"]
["11762647_at",23.624166,22.153883,21.983501,26.371351,22.036846,21.7864,0.096524715,0.0038208961,-0.007317543,0.2552328,-0.0038208961,-0.020310879,0.85884243,0.6537322,-1.032416,-0.046024386,1.032416,"down",0.2552328,-0.0038208961,-0.020310879,0.096524715,0.0038208961,-0.007317543]
["11746784_a_at",16.838413,18.96399,23.027596,17.93257,18.96399,17.950827,-0.13190031,0.039606094,0.3197074,-0.041074276,0.039606094,-0.039606094,0.79679483,0.5416011,1.0639982,0.08949574,1.0639982,"up","C9orf84",158401,"","","","chr9:114500148-114557288 (-) // 94.17 // q31.3"]
["11742700_s_at",167.85995,168.6017,162.77722,207.20018,173.37749,179.32242,-0.026509762,-0.020148754,-0.07086897,0.27725744,0.020148754,0.06878853,0.39142442,0.11556906,-1.1182485,-0.16124077,1.1182485,"down","C1R",715,"0006508 // proteolysis // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0006956 // complement activation // traceable author statement /// 0006956 // complement activation // inferred from electronic annotation /// 0006958 // complement activation, classical pathway // traceable author statement /// 0006958 // complement activation, classical pathway // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // not recorded /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // traceable author statement /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr12:7187512-7245065 (-) // 89.76 // p13.31"]
["11757860_s_at",58.08722,67.98193,67.41189,24.099558,28.474316,38.00567,0.30600262,0.5329337,0.52078485,-0.96321106,-0.7225566,-0.3060031,0.08811884,0.0055695316,2.1692011,1.1171638,2.1692011,"up","QKI",9444,"0001570 // vasculogenesis // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008366 // axon ensheathment // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation /// 0042692 // muscle cell differentiation // inferred from electronic annotation /// 0042759 // long-chain fatty acid biosynthetic process // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017124 // SH3 domain binding // inferred from electronic annotation","chr6:163990768-163991477 (+) // 98.73 // q26"]
["11733527_at",11.799394,11.290679,11.470845,11.305099,12.673311,12.919994,0.020370483,-0.04320979,-0.020370483,-0.041368723,0.12345123,0.15126324,0.53189576,0.21677917,-1.0659835,-0.092185155,1.0659835,"down","GABRR1",2569,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from electronic annotation /// 0007214 // gamma-aminobutyric acid signaling pathway // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0034220 // ion transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0034707 // chloride channel complex // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004890 // GABA-A receptor activity // inferred from electronic annotation /// 0004890 // GABA-A receptor activity // traceable author statement /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from electronic annotation /// 0016917 // GABA receptor activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr6:89887222-89927496 (-) // 99.81 // q15"]
["11736484_a_at",77.056244,91.62284,103.35347,94.98396,118.69099,101.55626,-0.35003376,-0.1002388,0.07356882,-0.04826212,0.27319288,0.048261642,0.55459285,0.23602933,-1.1620177,-0.21663204,1.1620177,"down","AGFG1",3267,"0001675 // acrosome assembly // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007289 // spermatid nucleus differentiation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0032312 // regulation of ARF GTPase activity // inferred from electronic annotation /// 0045109 // intermediate filament organization // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008060 // ARF GTPase activator activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:228336887-228425938 (+) // 85.66 // q36.3"]
["11755566_a_at",99.83279,82.51834,87.52822,99.16251,72.841,90.05622,0.16922665,-0.10557222,-0.02053833,0.15950823,-0.2855363,0.02053833,0.9110193,0.7645914,1.0349315,0.049535338,1.0349315,"up","HEATR7A /// LOC100652949 /// LOC377711","100652949 /// 377711 /// 727957","","","","chr8:145294014-145316828 (+) // 98.41 // q24.3 /// chr8:145463067-145485881 (+) // 98.41 // q24.3"]
["11717595_s_at",156.91391,154.79814,136.75677,213.89655,214.9646,185.40187,-0.120340824,-0.13992596,-0.31870222,0.32659912,0.33378506,0.1203413,0.10823971,0.008587863,-1.3691036,-0.45323157,1.3691036,"down","ELF3",1999,"0001824 // blastocyst development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006954 // inflammatory response // inferred from expression pattern /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008544 // epidermis development // non-traceable author statement /// 0009653 // anatomical structure morphogenesis // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030855 // epithelial cell differentiation // inferred from expression pattern /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0060056 // mammary gland involution // inferred from sequence or structural similarity /// 0060056 // mammary gland involution // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr1:201979689-201986311 (+) // 91.6 // q32.1"]
["11756971_x_at",15.268226,17.000866,13.33494,19.781368,14.242108,15.565455,-0.013907909,0.14116812,-0.20922899,0.3597021,-0.11427736,0.013907671,0.8016708,0.54913515,-1.08205,-0.11376712,1.08205,"down","PKM",5315,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006096 // glycolysis // inferred from electronic annotation /// 0006096 // glycolysis // non-traceable author statement /// 0006096 // glycolysis // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0012501 // programmed cell death // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004743 // pyruvate kinase activity // inferred from electronic annotation /// 0004743 // pyruvate kinase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030955 // potassium ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:72492848-72521017 (-) // 99.74 // q23"]
["11751674_a_at",72.22291,74.431244,75.25766,69.848015,82.41384,100.380745,-0.051416397,-0.007964611,0.007965088,-0.0996542,0.13901281,0.42353773,0.64078724,0.3231772,-1.12618,-0.1714375,1.12618,"down","STOML1",9399,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0032934 // sterol binding // inferred from electronic annotation","chr15:74276277-74284564 (-) // 99.59 // q24.1"]
["11744418_a_at",227.55019,235.75873,261.77606,280.73074,263.95645,250.61739,-0.17072439,-0.11959839,0.03142357,0.13227749,0.043390274,-0.03142357,0.45313165,0.15567666,-1.0976219,-0.13438119,1.0976219,"down","PPAPDC1B",84513,"0008152 // metabolic process // inferred from electronic annotation /// 0046839 // phospholipid dephosphorylation // inferred from direct assay","0005737 // cytoplasm // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0008195 // phosphatidate phosphatase activity // inferred from direct assay /// 0008195 // phosphatidate phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr8:38120647-38127061 (-) // 85.15 // p11.23"]
["11752504_a_at",140.59024,141.90327,136.37315,125.21562,120.559845,141.39078,0.021968365,0.035379887,-0.021968365,-0.14511347,-0.19977856,0.03015995,0.48304385,0.17789343,1.0842549,0.11670391,1.0842549,"up","DUSP16",80824,"0000188 // inactivation of MAPK activity // not recorded /// 0000188 // inactivation of MAPK activity // traceable author statement /// 0000188 // inactivation of MAPK activity // inferred from electronic annotation /// 0006470 // protein dephosphorylation // not recorded /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // traceable author statement /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0043409 // negative regulation of MAPK cascade // inferred from electronic annotation /// 0045204 // MAPK export from nucleus // traceable author statement /// 0045209 // MAPK phosphatase export from nucleus, leptomycin B sensitive // traceable author statement","0005634 // nucleus // not recorded /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // not recorded /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // traceable author statement /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0017017 // MAP kinase tyrosine/serine/threonine phosphatase activity // not recorded /// 0017017 // MAP kinase tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation","chr12:12629692-12674059 (-) // 98.6 // p13.2"]
["11722964_a_at",652.2453,624.08417,626.4894,683.5692,673.8404,662.7676,-0.011544228,-0.0752182,-0.06966877,0.056128502,0.035448074,0.011544228,0.17417863,0.02294877,-1.0618039,-0.08651739,1.0618039,"down","AMMECR1",9949,"0051260 // protein homooligomerization // inferred from electronic annotation","","","chrX:109437413-109561467 (-) // 93.51 // q23"]
["11725662_a_at",11.907193,16.377148,13.879842,16.367365,15.812623,16.604607,-0.43411613,0.025734901,-0.2129581,0.02487278,-0.02487278,0.04563427,0.4769677,0.17347352,-1.1666118,-0.22232455,1.1666118,"down","SLC16A14",151473,"0006810 // transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0015293 // symporter activity // inferred from electronic annotation","chr2:230899695-230933715 (-) // 96.71 // q36.3"]
["11755212_a_at",14.941996,20.830654,19.045698,16.734621,20.208818,24.305477,-0.3928523,0.086483,-0.042759895,-0.22938919,0.042759895,0.30905628,0.7704243,0.49833092,-1.1151096,-0.15718547,1.1151096,"down","SVOPL",136306,"0006810 // transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0022857 // transmembrane transporter activity // inferred from electronic annotation","chr7:138279041-138348316 (-) // 80.42 // q34"]
["11739042_x_at",46.015312,44.382484,42.00598,32.858326,26.76731,26.115316,0.3086872,0.25656366,0.17716789,-0.17716789,-0.47295475,-0.5085306,0.081520505,0.0047738985,1.551529,0.6336907,1.551529,"up","LIMK2",3985,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016310 // phosphorylation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0042325 // regulation of phosphorylation // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005801 // cis-Golgi network // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr22:31644296-31676059 (+) // 99.13 // q12.2"]
["11759991_at",46.46135,60.769512,67.083206,53.465973,69.07621,63.381863,-0.41767788,-0.030361176,0.1122427,-0.21508789,0.15447998,0.030360699,0.84314775,0.62383187,-1.0731485,-0.10184971,1.0731485,"down","CFDP1",10428,"0006916 // anti-apoptosis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation","","","chr16:75428579-75467359 (-) // 81.66 // q23.1"]
["11726893_a_at",407.9393,373.68753,376.42886,394.10352,383.1018,365.26102,0.103302,-0.023220062,-0.012675285,0.05352211,0.012675285,-0.056124687,0.8950919,0.730063,1.0133351,0.01911135,1.0133351,"up","ST7 /// ST7-OT3","7982 /// 93655","","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr7:116593394-116870077 (+) // 93.29 // q31.2"]
["11745921_a_at",15.692751,18.427198,18.607872,17.374336,15.723721,19.10117,-0.1892991,0.04243946,0.056515694,-0.04243946,-0.18645477,0.09426355,0.9651862,0.90293485,1.0102849,0.01476219,1.0102849,"up","ZSCAN30",100101467,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr18:32830910-32870196 (-) // 83.68 // q12.2"]
["11739368_a_at",24.082438,29.113222,35.80975,28.166965,18.879742,24.71906,-0.1318326,0.14186049,0.4405384,0.09419012,-0.482975,-0.09419012,0.57921237,0.25953043,1.2407224,0.31118038,1.2407224,"up","DMXL2",23312,"","0008021 // synaptic vesicle // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0017137 // Rab GTPase binding // inferred from direct assay","chr15:51739907-51915030 (-) // 99.99 // q21.2"]
["11735874_x_at",80.81484,85.868126,102.22291,79.72289,85.51257,96.01688,-0.08450985,0.0029931068,0.25451708,-0.10413551,-0.0029931068,0.16415882,0.91621053,0.7780973,1.027157,0.03865664,1.027157,"up","ADAMTSL4",54507,"0006915 // apoptotic process // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005614 // interstitial matrix // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0002020 // protease binding // inferred from physical interaction /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation","chr1:150521897-150531221 (+) // 99.24 // q21.3"]
["11754667_a_at",54.956387,60.113274,62.249714,56.89029,75.891846,77.76701,-0.15458775,-0.025191784,0.02519226,-0.10469246,0.31107044,0.34628344,0.5138228,0.20148888,-1.1775184,-0.23574956,1.1775184,"down","CPNE6",9362,"0006629 // lipid metabolic process // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0016192 // vesicle-mediated transport // traceable author statement","0005624 // membrane fraction // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation","0001786 // phosphatidylserine binding // inferred from electronic annotation /// 0005215 // transporter activity // traceable author statement /// 0005509 // calcium ion binding // traceable author statement","chr14:24540056-24547295 (+) // 99.17 // q11.2"]
["11750005_a_at",28.862709,17.956127,20.90419,21.849634,21.600895,21.33376,0.42709208,-0.25763845,-0.03832245,0.025494576,0.0089764595,-0.0089764595,0.9539366,0.8701593,1.0247076,0.035212234,1.0247076,"up","CNTROB",116840,"0000910 // cytokinesis // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0007099 // centriole replication // inferred from mutant phenotype /// 0051299 // centrosome separation // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005814 // centriole // inferred from direct assay /// 0005814 // centriole // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction","chr17:7840520-7847914 (+) // 100.0 // p13.1"]
["11740385_x_at",38.421555,48.56093,44.49238,34.420155,38.691772,42.251534,-0.07359934,0.2642808,0.13804293,-0.23226166,-0.06348848,0.06348848,0.5422205,0.22542848,1.1383904,0.18699543,1.1383904,"up","METTL20",254013,"0006479 // protein methylation // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0008168 // methyltransferase activity // inferred from electronic annotation /// 0008276 // protein methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr12:31812608-31826879 (+) // 51.89 // p11.21"]
["11754053_x_at",5781.6245,5631.8213,5541.918,5363.2407,5480.242,5394.284,0.06916332,0.0312891,0.008072853,-0.039206505,-0.008072853,-0.030881882,0.2183174,0.036304466,1.0440775,0.062228825,1.0440775,"up","TPI1",7167,"0005975 // carbohydrate metabolic process // traceable author statement /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006006 // glucose metabolic process // traceable author statement /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006094 // gluconeogenesis // inferred from electronic annotation /// 0006094 // gluconeogenesis // traceable author statement /// 0006096 // glycolysis // inferred from electronic annotation /// 0006096 // glycolysis // traceable author statement /// 0006098 // pentose-phosphate shunt // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0019682 // glyceraldehyde-3-phosphate metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004807 // triose-phosphate isomerase activity // not recorded /// 0004807 // triose-phosphate isomerase activity // non-traceable author statement /// 0004807 // triose-phosphate isomerase activity // traceable author statement /// 0004807 // triose-phosphate isomerase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation","chr12:6976694-6979855 (+) // 97.57 // p13.31"]
["11740619_at",50.580925,52.825256,53.343067,45.38404,51.900986,56.11621,-0.049901485,0.012732983,0.026805878,-0.2063098,-0.012732983,0.09992266,0.88828295,0.7150455,1.0254467,0.03625244,1.0254467,"up","ADRA1D",146,"0001986 // negative regulation of the force of heart contraction involved in baroreceptor response to increased systemic arterial blood pressure // inferred from electronic annotation /// 0001994 // norepinephrine-epinephrine vasoconstriction involved in regulation of systemic arterial blood pressure // inferred from electronic annotation /// 0006259 // DNA metabolic process // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0071875 // adrenergic receptor signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004935 // adrenergic receptor activity // inferred from electronic annotation /// 0004937 // alpha1-adrenergic receptor activity // inferred from electronic annotation /// 0004937 // alpha1-adrenergic receptor activity // traceable author statement","chr20:4200906-4229662 (-) // 89.61 // p13"]
["11726022_a_at",712.2911,784.6808,783.81036,660.9742,665.2032,695.0295,0.01769638,0.15733528,0.15573406,-0.09017658,-0.08097553,-0.01769638,0.1931839,0.028366491,1.1275604,0.17320469,1.1275604,"up","FAM177A1",283635,"","","","chr14:35514112-35552584 (+) // 86.56 // q13.2"]
["11756505_s_at",143.69716,135.35292,135.45808,134.10527,102.00583,105.987076,0.09298563,0.0066800117,0.007800579,-0.0066804886,-0.40139437,-0.34615755,0.33746526,0.08595304,1.2202975,0.28723285,1.2202975,"up","CCDC144A /// USP32 /// USP32P1 /// USP32P2 /// USP6","162632 /// 220594 /// 84669 /// 9098 /// 9720","0006464 // cellular protein modification process // non-traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0016579 // protein deubiquitination // traceable author statement /// 0016579 // protein deubiquitination // inferred from direct assay /// 0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0060627 // regulation of vesicle-mediated transport // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // traceable author statement /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from direct assay","0003676 // nucleic acid binding // traceable author statement /// 0004197 // cysteine-type endopeptidase activity // traceable author statement /// 0004221 // ubiquitin thiolesterase activity // inferred from direct assay /// 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr17:20295053-20334331 (+) // 92.61 // p11.2 /// chr17:16665624-16705753 (+) // 90.52 // p11.2 /// chr17:18416591-18456689 (-) // 91.75 // p11.2"]
["11757430_s_at",2595.3252,2773.3962,2870.056,2117.227,2499.223,2401.535,0.027217865,0.122956276,0.1723814,-0.26652145,-0.027217865,-0.08474064,0.25540826,0.049328774,1.1758292,0.23367848,1.1758292,"up","TMED5",50999,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0090161 // Golgi ribbon formation // inferred from mutant phenotype","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005801 // cis-Golgi network // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation /// 0070971 // endoplasmic reticulum exit site // inferred from direct assay","","chr1:93617410-93618009 (-) // 99.17 // p22.1"]
["11750848_a_at",386.01065,347.748,350.88095,422.88962,432.78375,391.86478,-0.010857582,-0.16145611,-0.14851665,0.12078285,0.1541481,0.010857582,0.21574968,0.035470653,-1.1504564,-0.20220634,1.1504564,"down","TOMM70A",9868,"0006626 // protein targeting to mitochondrion // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005742 // mitochondrial outer membrane translocase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008320 // protein transmembrane transporter activity // traceable author statement","chr3:100084237-100120283 (-) // 100.0 // q12.2"]
["11734264_at",8.510766,8.983789,9.178238,7.043478,8.6464615,8.9174385,-0.04508066,0.032954454,0.06384754,-0.31808162,-0.022259712,0.022259712,0.64820117,0.33137515,1.0891991,0.12326765,1.0891991,"up","CERS3",204219,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0030148 // sphingolipid biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0050291 // sphingosine N-acyltransferase activity // inferred from electronic annotation","chr15:100940599-101069282 (-) // 88.63 // q26.3"]
["11749290_x_at",127.5088,119.88957,99.72291,166.5884,156.05627,180.76721,-0.14573479,-0.23462582,-0.5003352,0.2399559,0.14573431,0.35780144,0.12450908,0.011651777,-1.45538,-0.54139584,1.45538,"down","SH3GL1",6455,"0006897 // endocytosis // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007417 // central nervous system development // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation","chr19:4361312-4400512 (-) // 92.59 // p13.3"]
["11752401_x_at",14.725977,15.738733,15.95371,16.389072,18.914238,17.425976,-0.13494968,-0.038993597,-0.0194211,0.0194211,0.22615957,0.10792637,0.27910247,0.05912822,-1.134684,-0.18229052,1.134684,"down","POTEG /// POTEH","23784 /// 404785","","","","chr22:16256443-16287937 (-) // 87.52 // q11.1"]
["11763719_a_at",78.36438,88.4212,74.180855,66.419525,94.431816,96.01741,-0.08709717,0.08709717,-0.16624832,-0.3256879,0.18197823,0.2060008,0.8853485,0.7072591,-1.0542228,-0.076179825,1.0542228,"down","RPL18",6141,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // traceable author statement","chr19:49118590-49122888 (-) // 91.24 // q13.33"]
["11736959_a_at",19.779655,13.831736,17.336924,13.542331,14.109976,12.617003,0.50166845,-0.014366865,0.31149912,-0.04487276,0.014366627,-0.14697957,0.37852687,0.10828401,1.2530369,0.32542884,1.2530369,"up","TNFSF15",9966,"0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007250 // activation of NF-kappaB-inducing kinase activity // inferred from direct assay /// 0042107 // cytokine metabolic process // inferred from direct assay /// 0050715 // positive regulation of cytokine secretion // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005102 // receptor binding // traceable author statement /// 0005123 // death receptor binding // inferred from electronic annotation /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005164 // tumor necrosis factor receptor binding // inferred from electronic annotation","chr9:117551612-117568412 (-) // 81.01 // q32"]
["11744496_at",18.501635,21.025911,19.548193,14.982269,18.17024,17.300924,0.013037682,0.19755316,0.0924201,-0.29135895,-0.013037682,-0.08376598,0.32650873,0.080815785,1.173153,0.23039123,1.173153,"up","GDEP",118425,"","","","chr4:80782441-80784399 (+) // 80.22 // q21.21"]
["11724781_a_at",82.778534,72.32735,82.25562,82.17299,76.512634,66.71114,0.062075615,-0.13263988,0.05293274,0.051483154,-0.051483154,-0.24925327,0.7822795,0.516665,1.0549738,0.07720722,1.0549738,"up","HERC4",26091,"0006464 // cellular protein modification process // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from sequence or structural similarity /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // not recorded","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // not recorded /// 0005737 // cytoplasm // not recorded /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // not recorded /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation","chr10:69681661-69835105 (-) // 95.65 // q21.3"]
["11742928_a_at",768.77325,783.9373,775.77167,843.2604,784.9236,740.8772,-0.020627022,0.0075531006,-0.0075531006,0.11279297,0.009366989,-0.07395077,0.8797262,0.696016,-1.0160317,-0.022945475,1.0160317,"down","AP3D1",8943,"0006726 // eye pigment biosynthetic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0033365 // protein localization to organelle // inferred from electronic annotation /// 0048007 // antigen processing and presentation, exogenous lipid antigen via MHC class Ib // inferred from electronic annotation /// 0048499 // synaptic vesicle membrane organization // inferred from electronic annotation /// 0051138 // positive regulation of NK T cell differentiation // inferred from electronic annotation /// 0061088 // regulation of sequestering of zinc ion // inferred from mutant phenotype","0000139 // Golgi membrane // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from direct assay /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation","0005215 // transporter activity // traceable author statement /// 0008565 // protein transporter activity // inferred from electronic annotation","chr19:2100992-2151556 (-) // 93.16 // p13.3"]
["11754610_a_at",97.39938,106.47382,111.62294,66.83644,79.93947,87.556175,0.076851845,0.20536613,0.27350092,-0.4664259,-0.2081523,-0.076851845,0.18977869,0.027267206,1.3525822,0.43571627,1.3525822,"up","FICD",11153,"0018117 // protein adenylylation // inferred from direct assay /// 0034259 // negative regulation of Rho GTPase activity // traceable author statement","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0070733 // protein adenylyltransferase activity // inferred from direct assay","chr12:108909092-108913941 (+) // 99.96 // q23.3"]
["11740677_a_at",3662.1235,3702.8188,3782.1746,3619.7715,3543.247,3650.3533,0.002322197,0.01826477,0.04885769,-0.01445961,-0.04528618,-0.002322197,0.32298607,0.0790859,1.0308522,0.043837495,1.0308522,"up","GDI2",2665,"0007165 // signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0005093 // Rab GDP-dissociation inhibitor activity // inferred from electronic annotation /// 0005093 // Rab GDP-dissociation inhibitor activity // traceable author statement /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr10:5807186-5855512 (-) // 96.45 // p15.1"]
["11758831_at",614.1533,703.0564,670.6892,567.2412,674.54944,645.483,-0.09941292,0.09562874,0.027632713,-0.21404934,0.035912514,-0.027632713,0.74629,0.46253803,1.0544856,0.07653934,1.0544856,"up","POLR2C",5432,"0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0006370 // 7-methylguanosine mRNA capping // traceable author statement /// 0008380 // RNA splicing // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0050434 // positive regulation of viral transcription // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005665 // DNA-directed RNA polymerase II, core complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003899 // DNA-directed RNA polymerase activity // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr16:57496298-57506182 (+) // 91.48 // q21"]
["11730753_at",147.81499,135.44586,149.73076,143.96756,151.21036,124.255196,0.019024372,-0.10705137,0.0376029,-0.019024372,0.051789284,-0.23146152,0.8495959,0.63543737,1.0348518,0.04942416,1.0348518,"up","AGPAT5",55326,"0006639 // acylglycerol metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // non-traceable author statement /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0016024 // CDP-diacylglycerol biosynthetic process // inferred from electronic annotation /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003841 // 1-acylglycerol-3-phosphate O-acyltransferase activity // non-traceable author statement /// 0003841 // 1-acylglycerol-3-phosphate O-acyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation","chr8:6565865-6619019 (+) // 93.39 // p23.1"]
["11736399_at",17.374336,19.506834,17.866646,20.890852,20.37989,18.264791,-0.11956453,0.04745722,-0.07925367,0.14634895,0.11062384,-0.04745722,0.50876653,0.19770773,-1.086955,-0.12029215,1.086955,"down","RFT1",91869,"0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005319 // lipid transporter activity // inferred from electronic annotation","chr3:53122260-53164480 (-) // 84.32 // p21.1"]
["11762379_at",13.448011,16.77371,17.832174,13.094953,15.793666,20.120224,-0.27538133,0.043427944,0.13170862,-0.31376338,-0.043427944,0.30587244,0.9805126,0.9439172,-1.0113684,-0.016308598,1.0113684,"down","NOS1",4842,"0001666 // response to hypoxia // inferred from expression pattern /// 0002028 // regulation of sodium ion transport // inferred from electronic annotation /// 0006527 // arginine catabolic process // inferred by curator /// 0006809 // nitric oxide biosynthetic process // inferred from electronic annotation /// 0006809 // nitric oxide biosynthetic process // inferred from sequence or structural similarity /// 0006941 // striated muscle contraction // inferred from electronic annotation /// 0007520 // myoblast fusion // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0009408 // response to heat // inferred from direct assay /// 0010523 // negative regulation of calcium ion transport into cytosol // traceable author statement /// 0018119 // peptidyl-cysteine S-nitrosylation // inferred from electronic annotation /// 0033555 // multicellular organismal response to stress // inferred from mutant phenotype /// 0035066 // positive regulation of histone acetylation // inferred from electronic annotation /// 0042136 // neurotransmitter biosynthetic process // traceable author statement /// 0042738 // exogenous drug catabolic process // inferred from electronic annotation /// 0043267 // negative regulation of potassium ion transport // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045909 // positive regulation of vasodilation // inferred from direct assay /// 0045909 // positive regulation of vasodilation // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051346 // negative regulation of hydrolase activity // inferred from electronic annotation /// 0051612 // negative regulation of serotonin uptake // inferred from electronic annotation /// 0051926 // negative regulation of calcium ion transport // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0055117 // regulation of cardiac muscle contraction // traceable author statement /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation","0001917 // photoreceptor inner segment // inferred from sequence or structural similarity /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016529 // sarcoplasmic reticulum // inferred from direct assay /// 0042383 // sarcolemma // inferred from direct assay /// 0042383 // sarcolemma // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity","0004517 // nitric-oxide synthase activity // inferred from electronic annotation /// 0004517 // nitric-oxide synthase activity // inferred from sequence or structural similarity /// 0005506 // iron ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0010181 // FMN binding // inferred from sequence or structural similarity /// 0010181 // FMN binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0020037 // heme binding // inferred from sequence or structural similarity /// 0020037 // heme binding // inferred from electronic annotation /// 0034617 // tetrahydrobiopterin binding // non-traceable author statement /// 0034618 // arginine binding // traceable author statement /// 0046870 // cadmium ion binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from sequence or structural similarity /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation /// 0050661 // NADP binding // inferred from sequence or structural similarity /// 0050661 // NADP binding // inferred from electronic annotation","chr12:117645952-117799411 (-) // 99.68 // q24.22"]
["11718763_a_at",1847.2689,1555.569,1491.1765,2011.0908,1782.3586,1633.9807,0.11430454,-0.13364697,-0.19463825,0.23688889,0.062698364,-0.062698364,0.62573016,0.30657548,-1.1097925,-0.15028992,1.1097925,"down","POMP",51371,"0043248 // proteasome assembly // inferred from mutant phenotype","0000502 // proteasome complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","","chr13:29233140-29253091 (+) // 97.05 // q12.3"]
["11733684_a_at",13.291894,19.21521,19.43441,18.291481,16.469297,16.169724,-0.3849287,0.14677334,0.16313791,0.07569647,-0.07569647,-0.10218048,0.98786396,0.9639648,1.0062957,0.009054276,1.0062957,"up","FRMD7",90167,"0007399 // nervous system development // inferred from electronic annotation /// 0010975 // regulation of neuron projection development // inferred from sequence or structural similarity /// 0010975 // regulation of neuron projection development // inferred from electronic annotation","0005856 // cytoskeleton // inferred from electronic annotation /// 0030426 // growth cone // inferred from sequence or structural similarity /// 0030426 // growth cone // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from sequence or structural similarity /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from sequence or structural similarity /// 0043025 // neuronal cell body // inferred from electronic annotation","","chrX:131211017-131262050 (-) // 96.34 // q26.2"]
["11720765_s_at",868.056,830.1304,834.40015,894.88245,882.5521,810.56635,0.028524399,-0.035925865,-0.028524399,0.072434425,0.052417755,-0.07033348,0.8146935,0.57206744,-1.021117,-0.030148141,1.021117,"down","TOR1A",1861,"0006457 // protein folding // traceable author statement /// 0006986 // response to unfolded protein // traceable author statement /// 0051085 // chaperone mediated protein folding requiring cofactor // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from direct assay","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // inferred from direct assay /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // traceable author statement /// 0051082 // unfolded protein binding // traceable author statement","chr9:132574739-132586529 (-) // 98.21 // q34.11"]
["11728654_x_at",17.633919,19.122316,14.444962,19.568548,19.005648,18.81058,-0.100633144,0.016271114,-0.38841963,0.049550533,0.0074419975,-0.0074419975,0.5416826,0.22498553,-1.1282687,-0.17411071,1.1282687,"down","IGFBP5",3488,"0001558 // regulation of cell growth // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0014912 // negative regulation of smooth muscle cell migration // inferred from direct assay /// 0017148 // negative regulation of translation // inferred from direct assay /// 0030336 // negative regulation of cell migration // inferred from direct assay /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0043569 // negative regulation of insulin-like growth factor receptor signaling pathway // inferred from direct assay /// 0043569 // negative regulation of insulin-like growth factor receptor signaling pathway // inferred from electronic annotation /// 0048630 // skeletal muscle tissue growth // inferred from electronic annotation /// 0048662 // negative regulation of smooth muscle cell proliferation // inferred from direct assay /// 0051146 // striated muscle cell differentiation // inferred from electronic annotation /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0060056 // mammary gland involution // inferred from electronic annotation /// 0071320 // cellular response to cAMP // inferred from direct assay /// 0071407 // cellular response to organic cyclic compound // inferred from direct assay","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0016942 // insulin-like growth factor binding protein complex // inferred by curator","0001968 // fibronectin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005520 // insulin-like growth factor binding // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from electronic annotation /// 0031994 // insulin-like growth factor I binding // inferred from physical interaction","chr2:217536827-217560272 (-) // 94.34 // q35"]
["11721851_x_at",338.42197,318.69287,291.3881,292.17273,275.51654,267.53333,0.21394157,0.127285,-0.0019397736,0.0019397736,-0.08274269,-0.12516308,0.298455,0.06751915,1.1342597,0.181751,1.1342597,"up","CHCHD6",84303,"0006974 // response to DNA damage stimulus // inferred from direct assay /// 0042407 // cristae formation // inferred from mutant phenotype","0005739 // mitochondrion // inferred from mutant phenotype /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr3:126423062-126679241 (+) // 90.89 // q21.3"]
["11732003_a_at",16.66166,19.46524,19.68136,20.43037,21.410889,21.834503,-0.26724052,-0.04287243,-0.02694273,0.02694273,0.09457207,0.12283707,0.32263944,0.078914806,-1.1437744,-0.1938025,1.1437744,"down","CRHR1",1394,"0001666 // response to hypoxia // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // traceable author statement /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007190 // activation of adenylate cyclase activity // traceable author statement /// 0007200 // phospholipase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007565 // female pregnancy // non-traceable author statement /// 0007567 // parturition // traceable author statement /// 0007610 // behavior // inferred from electronic annotation /// 0007613 // memory // inferred from electronic annotation /// 0008542 // visual learning // inferred from electronic annotation /// 0009755 // hormone-mediated signaling pathway // inferred from electronic annotation /// 0030855 // epithelial cell differentiation // inferred from electronic annotation /// 0032099 // negative regulation of appetite // inferred from electronic annotation /// 0042755 // eating behavior // inferred from electronic annotation /// 0043306 // positive regulation of mast cell degranulation // inferred from electronic annotation /// 0043526 // neuroprotection // inferred from electronic annotation /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0048266 // behavioral response to pain // inferred from electronic annotation /// 0060291 // long-term synaptic potentiation // inferred from electronic annotation /// 0071376 // cellular response to corticotropin-releasing hormone stimulus // traceable author statement /// 0071376 // cellular response to corticotropin-releasing hormone stimulus // inferred from electronic annotation","0005771 // multivesicular body // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0031982 // vesicle // inferred from electronic annotation /// 0033267 // axon part // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015056 // corticotrophin-releasing factor receptor activity // inferred from electronic annotation /// 0015056 // corticotrophin-releasing factor receptor activity // traceable author statement /// 0042277 // peptide binding // inferred from electronic annotation /// 0043404 // corticotropin-releasing hormone receptor activity // inferred from electronic annotation /// 0051424 // corticotropin-releasing hormone binding // inferred from electronic annotation","chr17:43861645-43913191 (+) // 96.83 // q21.31"]
["11718259_at",34.63637,31.60757,33.2909,40.557076,41.147026,42.637108,-0.11383295,-0.24585056,-0.17099285,0.11383295,0.1346674,0.1859889,0.05342409,0.0018334879,-1.2498213,-0.32172182,1.2498213,"down","NOTCH1",4851,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001708 // cell fate specification // inferred from electronic annotation /// 0001837 // epithelial to mesenchymal transition // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0002040 // sprouting angiogenesis // inferred from electronic annotation /// 0002052 // positive regulation of neuroblast proliferation // inferred from electronic annotation /// 0002437 // inflammatory response to antigenic stimulus // inferred from electronic annotation /// 0003180 // aortic valve morphogenesis // inferred from mutant phenotype /// 0003219 // cardiac right ventricle formation // inferred from electronic annotation /// 0003264 // regulation of cardioblast proliferation // inferred from electronic annotation /// 0003270 // Notch signaling pathway involved in regulation of secondary heart field cardioblast proliferation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006955 // immune response // non-traceable author statement /// 0006959 // humoral immune response // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from mutant phenotype /// 0007219 // Notch signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007220 // Notch receptor processing // traceable author statement /// 0007221 // positive regulation of transcription of Notch receptor target // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0007386 // compartment pattern specification // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007440 // foregut morphogenesis // inferred from electronic annotation /// 0007492 // endoderm development // inferred from electronic annotation /// 0007507 // heart development // inferred from mutant phenotype /// 0007507 // heart development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0009912 // auditory receptor cell fate commitment // inferred from electronic annotation /// 0010001 // glial cell differentiation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from mutant phenotype /// 0010812 // negative regulation of cell-substrate adhesion // inferred from direct assay /// 0010832 // negative regulation of myotube differentiation // inferred from sequence or structural similarity /// 0014807 // regulation of somitogenesis // inferred from electronic annotation /// 0021515 // cell differentiation in spinal cord // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030513 // positive regulation of BMP signaling pathway // inferred from sequence or structural similarity /// 0030514 // negative regulation of BMP signaling pathway // inferred from sequence or structural similarity /// 0030900 // forebrain development // inferred from electronic annotation /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0031960 // response to corticosteroid stimulus // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042246 // tissue regeneration // inferred from electronic annotation /// 0042640 // anagen // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from sequence or structural similarity /// 0045165 // cell fate commitment // inferred from electronic annotation /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045603 // positive regulation of endothelial cell differentiation // inferred from electronic annotation /// 0045618 // positive regulation of keratinocyte differentiation // inferred from electronic annotation /// 0045662 // negative regulation of myoblast differentiation // inferred from mutant phenotype /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045668 // negative regulation of osteoblast differentiation // inferred from sequence or structural similarity /// 0045687 // positive regulation of glial cell differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0045955 // negative regulation of calcium ion-dependent exocytosis // inferred from electronic annotation /// 0046427 // positive regulation of JAK-STAT cascade // inferred from sequence or structural similarity /// 0046533 // negative regulation of photoreceptor cell differentiation // inferred from electronic annotation /// 0048103 // somatic stem cell division // inferred from electronic annotation /// 0048663 // neuron fate commitment // inferred from electronic annotation /// 0048708 // astrocyte differentiation // inferred from electronic annotation /// 0048709 // oligodendrocyte differentiation // inferred from electronic annotation /// 0048711 // positive regulation of astrocyte differentiation // inferred from sequence or structural similarity /// 0048715 // negative regulation of oligodendrocyte differentiation // inferred from sequence or structural similarity /// 0048754 // branching morphogenesis of a tube // inferred from electronic annotation /// 0050678 // regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050767 // regulation of neurogenesis // inferred from electronic annotation /// 0050768 // negative regulation of neurogenesis // inferred from sequence or structural similarity /// 0050793 // regulation of developmental process // inferred from electronic annotation /// 0060253 // negative regulation of glial cell proliferation // inferred from sequence or structural similarity /// 0060528 // secretory columnal luminar epithelial cell differentiation involved in prostate glandular acinus development // inferred from electronic annotation /// 0060548 // negative regulation of cell death // inferred from electronic annotation /// 0060740 // prostate gland epithelium morphogenesis // inferred from electronic annotation /// 0060768 // regulation of epithelial cell proliferation involved in prostate gland development // inferred from electronic annotation /// 0061419 // positive regulation of transcription from RNA polymerase II promoter in response to hypoxia // inferred from sequence or structural similarity /// 0072602 // interleukin-4 secretion // inferred from electronic annotation /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from electronic annotation /// 0097150 // neuronal stem cell maintenance // inferred from expression pattern /// 2000737 // negative regulation of stem cell differentiation // inferred from mutant phenotype /// 2000811 // negative regulation of anoikis // inferred from mutant phenotype /// 2000974 // negative regulation of pro-B cell differentiation // inferred from sequence or structural similarity","0000139 // Golgi membrane // traceable author statement /// 0001669 // acrosomal vesicle // inferred from electronic annotation /// 0002193 // MAML1-RBP-Jkappa- ICN1 complex // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0001047 // core promoter binding // inferred from sequence or structural similarity /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0004857 // enzyme inhibitor activity // inferred from sequence or structural similarity /// 0004872 // receptor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from sequence or structural similarity /// 0031490 // chromatin DNA binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:139388895-139438556 (-) // 97.71 // q34.3"]
["11760158_at",129.40521,124.60292,140.55618,129.88951,157.38715,149.22287,-0.06231928,-0.116877556,0.056931496,-0.05693102,0.22010231,0.1432538,0.5304802,0.21555357,-1.1041199,-0.14289685,1.1041199,"down","HMGB1",3146,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0001773 // myeloid dendritic cell activation // inferred from sequence or structural similarity /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0002407 // dendritic cell chemotaxis // inferred from sequence or structural similarity /// 0002437 // inflammatory response to antigenic stimulus // inferred from expression pattern /// 0006265 // DNA topological change // inferred from sequence or structural similarity /// 0006288 // base-excision repair, DNA ligation // inferred from direct assay /// 0006309 // apoptotic DNA fragmentation // traceable author statement /// 0006310 // DNA recombination // inferred from sequence or structural similarity /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0008156 // negative regulation of DNA replication // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009408 // response to heat // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0010942 // positive regulation of cell death // inferred from electronic annotation /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0014911 // positive regulation of smooth muscle cell migration // inferred from electronic annotation /// 0017055 // negative regulation of RNA polymerase II transcriptional preinitiation complex assembly // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0031532 // actin cytoskeleton reorganization // inferred from electronic annotation /// 0032392 // DNA geometric change // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0033034 // positive regulation of myeloid cell apoptotic process // inferred from electronic annotation /// 0033151 // V(D)J recombination // inferred from direct assay /// 0034341 // response to interferon-gamma // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0043388 // positive regulation of DNA binding // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0045663 // positive regulation of myoblast differentiation // inferred from electronic annotation /// 0045931 // positive regulation of mitotic cell cycle // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0050727 // regulation of inflammatory response // inferred from electronic annotation /// 0050831 // male-specific defense response to bacterium // inferred from electronic annotation /// 0050918 // positive chemotaxis // inferred from sequence or structural similarity /// 0050930 // induction of positive chemotaxis // inferred from electronic annotation /// 0051103 // DNA ligation involved in DNA repair // inferred from sequence or structural similarity /// 0051450 // myoblast proliferation // inferred from electronic annotation /// 0071347 // cellular response to interleukin-1 // inferred from electronic annotation","0000793 // condensed chromosome // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0017053 // transcriptional repressor complex // inferred from direct assay","0000400 // four-way junction DNA binding // inferred from electronic annotation /// 0000401 // open form four-way junction DNA binding // inferred from electronic annotation /// 0000402 // crossed form four-way junction DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003681 // bent DNA binding // inferred from electronic annotation /// 0003684 // damaged DNA binding // inferred from sequence or structural similarity /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from sequence or structural similarity /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from sequence or structural similarity /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005125 // cytokine activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0008097 // 5S rRNA binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0008301 // DNA binding, bending // inferred from electronic annotation /// 0008301 // DNA binding, bending // inferred from mutant phenotype /// 0008301 // DNA binding, bending // inferred from sequence or structural similarity /// 0042056 // chemoattractant activity // inferred from sequence or structural similarity /// 0042277 // peptide binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation /// 0050786 // RAGE receptor binding // inferred from electronic annotation /// 0050786 // RAGE receptor binding // inferred from sequence or structural similarity /// 0051861 // glycolipid binding // inferred from electronic annotation /// 0070491 // repressing transcription factor binding // inferred from physical interaction","chr13:31035032-31040073 (-) // 95.42 // q12.3"]
["11749405_a_at",131.30066,94.791115,80.48356,108.46,81.14182,93.00369,0.4837818,0.0137319565,-0.2223258,0.20807123,-0.21057367,-0.0137319565,0.88510084,0.70658916,1.0696515,0.09714081,1.0696515,"up","NCKIPSD",51517,"0006607 // NLS-bearing substrate import into nucleus // traceable author statement /// 0007010 // cytoskeleton organization // non-traceable author statement /// 0007165 // signal transduction // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005882 // intermediate filament // non-traceable author statement /// 0008180 // signalosome // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // non-traceable author statement /// 0017124 // SH3 domain binding // inferred from electronic annotation","chr3:48712067-48717243 (-) // 100.0 // p21.31"]
["11762670_at",10.86685,12.350449,12.544605,12.632309,13.561753,13.653936,-0.21215892,-0.02752924,-0.005025625,0.005025625,0.10745096,0.117224455,0.36768067,0.1019678,-1.1158463,-0.15813829,1.1158463,"down","DBIL5P2",100169989,"","","","chr2:63344985-63346677 (-) // 89.07 // p15"]
["11764046_x_at",73.52864,83.37234,75.056206,83.62395,70.66175,73.372444,-0.014832497,0.16643,0.014832497,0.17077732,-0.07220936,-0.017900467,0.91453904,0.77291924,1.020013,0.028587503,1.020013,"up","IGHM",3507,"0006955 // immune response // non-traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005624 // membrane fraction // non-traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0003823 // antigen binding // inferred from electronic annotation","chr14:106320352-106321906 (-) // 95.6 // q32.33"]
["11743577_s_at",5.2132554,5.92476,5.986751,5.6176505,5.571917,6.76477,-0.14617729,0.038394928,0.053411484,-0.038394928,-0.050187826,0.22967911,0.82551616,0.59088874,-1.0461979,-0.06515577,1.0461979,"down","CPE",1363,"0003214 // cardiac left ventricle morphogenesis // inferred from mutant phenotype /// 0006464 // cellular protein modification process // non-traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // non-traceable author statement /// 0008152 // metabolic process // traceable author statement /// 0030070 // insulin processing // inferred from electronic annotation /// 0072657 // protein localization in membrane // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030141 // secretory granule // traceable author statement /// 0030658 // transport vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0004180 // carboxypeptidase activity // traceable author statement /// 0004180 // carboxypeptidase activity // inferred from electronic annotation /// 0004181 // metallocarboxypeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042043 // neurexin family protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050839 // cell adhesion molecule binding // inferred from physical interaction","chr4:166299894-166419467 (+) // 78.98 // q32.3"]
["11758835_at",87.832306,90.38955,92.539154,91.222885,92.681175,103.533066,-0.06497812,-0.023574352,0.010334015,-0.010334492,0.012546539,0.17228985,0.56146973,0.24218321,-1.0601292,-0.08424005,1.0601292,"down","SKIV2L2",23517,"0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000460 // maturation of 5.8S rRNA // inferred from mutant phenotype /// 0006364 // rRNA processing // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0000178 // exosome (RNase complex) // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016817 // hydrolase activity, acting on acid anhydrides // inferred from electronic annotation /// 0016818 // hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides // inferred from electronic annotation","chr5:54603574-54721869 (+) // 97.24 // q11.2"]
["11716732_at",13.871014,12.070511,13.221494,12.363115,12.327723,12.247708,0.16809893,-0.03248763,0.09891081,0.0020680428,-0.0020680428,-0.01146245,0.55534315,0.2367014,1.0584806,0.081994854,1.0584806,"up","CRYBA4",1413,"0007601 // visual perception // inferred from mutant phenotype /// 0007601 // visual perception // non-traceable author statement /// 0043010 // camera-type eye development // inferred from mutant phenotype","0005625 // soluble fraction // inferred from direct assay","0005212 // structural constituent of eye lens // inferred from electronic annotation","chr22:27018547-27026633 (+) // 94.58 // q12.1"]
["11742671_x_at",9.593377,8.807542,8.763403,9.68083,10.8491535,11.768282,-0.0065460205,-0.12984538,-0.13709378,0.006545782,0.17092586,0.28824687,0.27055323,0.05537148,-1.1862444,-0.24640124,1.1862444,"down","GH1",2688,"0002092 // positive regulation of receptor internalization // inferred from direct assay /// 0007259 // JAK-STAT cascade // inferred from direct assay /// 0010535 // positive regulation of activation of JAK2 kinase activity // inferred from direct assay /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // inferred from direct assay /// 0015758 // glucose transport // inferred from direct assay /// 0032355 // response to estradiol stimulus // inferred from direct assay /// 0040018 // positive regulation of multicellular organism growth // inferred from direct assay /// 0040018 // positive regulation of multicellular organism growth // inferred from mutant phenotype /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from direct assay /// 0042523 // positive regulation of tyrosine phosphorylation of Stat5 protein // inferred from direct assay /// 0043406 // positive regulation of MAP kinase activity // traceable author statement /// 0043568 // positive regulation of insulin-like growth factor receptor signaling pathway // inferred from direct assay /// 0046427 // positive regulation of JAK-STAT cascade // inferred from direct assay /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0060396 // growth hormone receptor signaling pathway // inferred from direct assay /// 0060397 // JAK-STAT cascade involved in growth hormone signaling pathway // traceable author statement /// 0070977 // bone maturation // inferred from direct assay","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay","0005131 // growth hormone receptor binding // inferred from direct assay /// 0005131 // growth hormone receptor binding // inferred from physical interaction /// 0005148 // prolactin receptor binding // inferred from physical interaction /// 0005179 // hormone activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:61994562-61996198 (-) // 100.0 // q23.3 /// chr17:61957574-61959223 (-) // 96.81 // q23.3"]
["11719538_at",6.975244,6.5085745,6.9217324,7.6913333,8.557696,7.012245,-0.0038163662,-0.10371852,-0.01492691,0.13717365,0.2911625,0.0038163662,0.37486196,0.10589744,-1.1367157,-0.1848714,1.1367157,"down","BBOX1",8424,"0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045329 // carnitine biosynthetic process // inferred from direct assay /// 0045329 // carnitine biosynthetic process // inferred from electronic annotation /// 0045329 // carnitine biosynthetic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005506 // iron ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0008336 // gamma-butyrobetaine dioxygenase activity // inferred from direct assay /// 0008336 // gamma-butyrobetaine dioxygenase activity // inferred from sequence or structural similarity /// 0008336 // gamma-butyrobetaine dioxygenase activity // traceable author statement /// 0008336 // gamma-butyrobetaine dioxygenase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:27062251-27149354 (+) // 94.58 // p14.2"]
["11729108_a_at",29.023237,41.840424,38.217518,29.424545,40.942043,40.24348,-0.43428612,0.09340286,-0.037260532,-0.4144745,0.06208849,0.037260532,0.97515726,0.92907935,-1.0146668,-0.021006042,1.0146668,"down","MBP",4155,"0006955 // immune response // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0007417 // central nervous system development // traceable author statement /// 0008366 // axon ensheathment // traceable author statement /// 0009636 // response to toxin // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation /// 0050771 // negative regulation of axonogenesis // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0033269 // internode region of axon // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043209 // myelin sheath // inferred from electronic annotation /// 0043218 // compact myelin // inferred from electronic annotation","0002020 // protease binding // inferred from electronic annotation /// 0019911 // structural constituent of myelin sheath // inferred from electronic annotation","chr18:74690789-74844774 (-) // 98.75 // q23"]
["11747795_a_at",173.69937,169.1969,165.7229,169.06833,164.88702,146.58191,0.0534029,0.01551342,-0.014416695,0.014416695,-0.021711826,-0.19148254,0.59252644,0.27269772,1.0602657,0.08442579,1.0602657,"up","R3HCC1L",27291,"","","0000166 // nucleotide binding // inferred from electronic annotation","chr10:99894417-100004321 (+) // 92.3 // q24.2"]
["11762019_at",18.074387,15.237613,16.926895,16.863832,22.27146,18.365059,0.047314644,-0.19899511,-0.047314644,-0.052699566,0.34856415,0.07033157,0.5652823,0.24587691,-1.1394969,-0.18839702,1.1394969,"down","CENPI",2491,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006334 // nucleosome assembly // traceable author statement /// 0007548 // sex differentiation // traceable author statement /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0042699 // follicle-stimulating hormone signaling pathway // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005515 // protein binding // inferred from physical interaction","chrX:100353190-100396278 (+) // 97.58 // q22.1"]
["11729403_a_at",199.93198,229.3426,235.90349,228.70917,258.36206,283.32587,-0.21834183,-0.020346165,0.020346165,-0.024336338,0.15154362,0.2846117,0.4367973,0.14423087,-1.1567311,-0.21005356,1.1567311,"down","SLC30A3",7781,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006829 // zinc ion transport // inferred from electronic annotation /// 0051050 // positive regulation of transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0061088 // regulation of sequestering of zinc ion // inferred from direct assay","0005624 // membrane fraction // traceable author statement /// 0005768 // endosome // traceable author statement /// 0005770 // late endosome // inferred from direct assay /// 0005887 // integral to plasma membrane // traceable author statement /// 0008021 // synaptic vesicle // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0044444 // cytoplasmic part // inferred from direct assay /// 0045202 // synapse // inferred from electronic annotation","0008324 // cation transmembrane transporter activity // inferred from electronic annotation /// 0015633 // zinc transporting ATPase activity // traceable author statement","chr2:27477440-27486127 (-) // 95.66 // p23.3"]
["11733354_a_at",22.495674,22.25845,19.46894,20.429985,21.44127,19.407246,0.10410833,0.08881378,-0.10436487,-0.034851074,0.034851074,-0.10894394,0.7390361,0.45096242,1.0466896,0.06583371,1.0466896,"up","RFESD",317671,"0055114 // oxidation-reduction process // inferred from electronic annotation","","0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051537 // 2 iron, 2 sulfur cluster binding // inferred from electronic annotation","chr5:94982582-94992848 (+) // 76.03 // q15"]
["11722137_a_at",18.140375,17.249918,16.203207,15.033386,19.718142,17.986046,0.042470455,-0.030144215,-0.12045431,-0.22856379,0.16278982,0.030144215,0.9482469,0.85520756,-1.0168917,-0.024166064,1.0168917,"down","GUCY1A3",2982,"0006182 // cGMP biosynthetic process // traceable author statement /// 0006182 // cGMP biosynthetic process // inferred from electronic annotation /// 0007263 // nitric oxide mediated signal transduction // traceable author statement /// 0007263 // nitric oxide mediated signal transduction // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008015 // blood circulation // traceable author statement /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0009190 // cyclic nucleotide biosynthetic process // inferred from electronic annotation /// 0009635 // response to herbicide // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0030828 // positive regulation of cGMP biosynthetic process // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0052565 // response to defense-related host nitric oxide production // inferred from electronic annotation /// 0060087 // relaxation of vascular smooth muscle // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008074 // guanylate cyclase complex, soluble // traceable author statement /// 0008074 // guanylate cyclase complex, soluble // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004383 // guanylate cyclase activity // inferred from electronic annotation /// 0004383 // guanylate cyclase activity // traceable author statement /// 0004872 // receptor activity // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016849 // phosphorus-oxygen lyase activity // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0043167 // ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr4:156587876-156658211 (+) // 95.18 // q32.1"]
["11724947_a_at",16.45415,15.296338,18.23756,16.390003,18.020187,22.027496,-0.06558132,-0.17084646,0.08288002,-0.07121658,0.06558132,0.35527277,0.63209426,0.31373733,-1.1232884,-0.16772836,1.1232884,"down","MAGI2",9863,"0002092 // positive regulation of receptor internalization // inferred from direct assay /// 0003402 // planar cell polarity pathway involved in axis elongation // non-traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from sequence or structural similarity /// 0032516 // positive regulation of phosphoprotein phosphatase activity // inferred from direct assay /// 0032926 // negative regulation of activin receptor signaling pathway // inferred from sequence or structural similarity /// 0032926 // negative regulation of activin receptor signaling pathway // inferred from electronic annotation /// 0043113 // receptor clustering // inferred from sequence or structural similarity /// 0043113 // receptor clustering // inferred from electronic annotation /// 0051291 // protein heterooligomerization // inferred from sequence or structural similarity /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0051898 // negative regulation of protein kinase B signaling cascade // inferred from direct assay /// 0060395 // SMAD protein signal transduction // inferred from sequence or structural similarity /// 0060395 // SMAD protein signal transduction // inferred from electronic annotation /// 0071850 // mitotic cell cycle arrest // inferred from sequence or structural similarity /// 0072015 // glomerular visceral epithelial cell development // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from direct assay /// 0014069 // postsynaptic density // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0036057 // slit diaphragm // inferred from sequence or structural similarity /// 0043234 // protein complex // inferred from electronic annotation /// 0045202 // synapse // inferred from sequence or structural similarity /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity","0004871 // signal transducer activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0019902 // phosphatase binding // inferred from physical interaction /// 0030159 // receptor signaling complex scaffold activity // inferred from direct assay /// 0030165 // PDZ domain binding // inferred from electronic annotation /// 0031697 // beta-1 adrenergic receptor binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation /// 0046332 // SMAD binding // inferred from sequence or structural similarity /// 0046332 // SMAD binding // inferred from electronic annotation /// 0070699 // type II activin receptor binding // inferred from sequence or structural similarity /// 0070699 // type II activin receptor binding // inferred from electronic annotation","chr7:77646392-79083121 (-) // 93.95 // q21.11"]
["11731087_a_at",372.40695,335.4517,345.413,319.6932,349.15167,371.1391,0.10079193,-0.049983025,-0.00776577,-0.119400024,0.00776577,0.095871925,0.930398,0.8114822,1.0136796,0.019601757,1.0136796,"up","TM9SF1",10548,"0006914 // autophagy // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0000421 // autophagic vacuole membrane // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","","chr14:24658690-24664882 (-) // 95.43 // q12"]
["11753708_a_at",29.38498,42.178616,30.144096,36.260166,35.821186,36.90784,-0.29452038,0.2269125,-0.2577238,0.0087862015,-0.0087862015,0.034327984,0.78205264,0.51602495,-1.0866494,-0.11988656,1.0866494,"down","CIDEC",63924,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay","","chr3:9908746-9920172 (-) // 99.77 // p25.3"]
["11759379_at",10.464382,11.737433,9.765744,10.989547,9.7111225,10.555696,-0.006267071,0.15936255,-0.1059525,0.06437755,-0.11404443,0.006267309,0.91057456,0.7630864,1.0211401,0.030180814,1.0211401,"up","OR5L1",219437,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:55578842-55579952 (+) // 100.0 // q11"]
["11725427_a_at",16.41403,17.9811,17.802923,14.184379,14.686766,17.337624,-0.039488316,0.09206343,0.07769632,-0.25011468,-0.1999011,0.039488316,0.43228203,0.14146855,1.133093,0.18026628,1.133093,"up","ABLIM3",22885,"0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:148521045-148639999 (+) // 98.42 // q32"]
["11756240_a_at",84.029625,77.68067,76.995575,79.35705,71.01752,89.08422,0.0979414,-0.015401363,-0.028181076,0.015401363,-0.14478159,0.1822133,0.9983909,0.9962805,1.0003526,0.000508635,1.0003526,"up","SHISA4",149345,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:201858065-201861430 (+) // 96.23 // q32.1"]
["11738223_a_at",29.23897,33.56713,30.538527,34.291386,36.007656,34.70315,-0.21455526,-0.015398502,-0.15181732,0.015398502,0.08585596,0.032619,0.26054862,0.0513607,-1.1265267,-0.17188153,1.1265267,"down","IL17F",112744,"0006029 // proteoglycan metabolic process // inferred from direct assay /// 0006954 // inflammatory response // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from direct assay /// 0017015 // regulation of transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0042089 // cytokine biosynthetic process // inferred from direct assay /// 0042109 // lymphotoxin A biosynthetic process // inferred from direct assay /// 0045076 // regulation of interleukin-2 biosynthetic process // inferred from direct assay /// 0045408 // regulation of interleukin-6 biosynthetic process // inferred from direct assay /// 0045414 // regulation of interleukin-8 biosynthetic process // inferred from direct assay /// 0045423 // regulation of granulocyte macrophage colony-stimulating factor biosynthetic process // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051216 // cartilage development // inferred from direct assay","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0005125 // cytokine activity // inferred from direct assay /// 0005125 // cytokine activity // inferred from electronic annotation /// 0019955 // cytokine binding // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from direct assay","chr6:52101483-52109298 (-) // 93.44 // p12.2"]
["11749937_x_at",55.24994,51.68148,49.41796,61.954796,57.470642,54.19196,0.01394701,-0.08237791,-0.14698982,0.17919111,0.07079983,-0.013946533,0.37784904,0.107827455,-1.1099452,-0.15048842,1.1099452,"down","ZFP36L1",677,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // inferred from electronic annotation /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006402 // mRNA catabolic process // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0033077 // T cell differentiation in thymus // inferred from electronic annotation /// 0043488 // regulation of mRNA stability // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003729 // mRNA binding // inferred from direct assay /// 0003729 // mRNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0017091 // AU-rich element binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:69256108-69259784 (-) // 97.82 // q24.1"]
["11762502_at",7.06983,7.494877,6.6250815,6.85162,7.762211,6.4746428,0.022615194,0.106844425,-0.07112217,-0.022615194,0.15740752,-0.10425973,0.97389066,0.9252701,1.0064449,0.009268235,1.0064449,"up","DAOA-AS1",282706,"","","","chr13:106111407-106144526 (-) // 74.29 // q33.2"]
["11747917_a_at",36.966682,37.696423,41.477585,30.802181,37.14049,35.661472,-0.0033836365,0.02481842,0.16272259,-0.26657677,0.0033836365,-0.055243015,0.45615444,0.15828499,1.1231349,0.16753116,1.1231349,"up","ITGA11",22801,"0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // traceable author statement /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007517 // muscle organ development // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0008305 // integrin complex // inferred from electronic annotation /// 0008305 // integrin complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005518 // collagen binding // traceable author statement","chr15:68594809-68724749 (-) // 99.13 // q23"]
["11738889_at",63.183537,59.326157,60.55738,51.134113,42.561977,48.35055,0.19807148,0.107191086,0.13682556,-0.107191086,-0.371912,-0.18794489,0.12155411,0.011104833,1.292095,0.36971208,1.292095,"up","IQCD",115811,"","","","chr12:113633247-113658880 (-) // 91.49 // q24.13"]
["11746963_a_at",73.81153,73.40058,80.84257,66.50348,77.10702,82.19412,-0.03150797,-0.039562702,0.09976101,-0.18192434,0.03150797,0.12368107,0.95114094,0.8639506,1.0128884,0.018475272,1.0128884,"up","DNAJB2",3300,"0006457 // protein folding // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0006986 // response to unfolded protein // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from genetic interaction /// 0030308 // negative regulation of cell growth // inferred from genetic interaction /// 0030433 // ER-associated protein catabolic process // inferred from direct assay /// 0031398 // positive regulation of protein ubiquitination // inferred from direct assay /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0090084 // negative regulation of inclusion body assembly // inferred from direct assay /// 0090086 // negative regulation of protein deubiquitination // inferred from direct assay","0000502 // proteasome complex // inferred from direct assay /// 0016234 // inclusion body // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0030544 // Hsp70 protein binding // inferred from physical interaction /// 0031072 // heat shock protein binding // inferred from electronic annotation /// 0031593 // polyubiquitin binding // inferred from direct assay /// 0051082 // unfolded protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // traceable author statement /// 0070628 // proteasome binding // inferred from direct assay","chr2:220144088-220151596 (+) // 91.81 // q35"]
["11750684_a_at",239.82527,222.20865,217.53458,224.93524,229.70462,224.02843,0.09538889,-0.014680386,-0.04535103,0.0029144287,0.03318453,-0.0029139519,0.9953342,0.98770446,1.0005021,0.0007242091,1.0005021,"up","DDX31",64794,"","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr9:135470146-135538887 (-) // 99.88 // q34.13"]
["11719312_a_at",115.0263,73.26565,86.5961,62.235374,63.232235,49.083736,0.7569928,0.106238365,0.34740305,-0.12916327,-0.106238365,-0.47165346,0.24567351,0.046044704,1.5574974,0.6392297,1.5574974,"up","MAP2K5",5607,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0000165 // MAPK cascade // inferred from electronic annotation /// 0000187 // activation of MAPK activity // inferred from sequence or structural similarity /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from sequence or structural similarity /// 0034115 // negative regulation of heterotypic cell-cell adhesion // inferred from sequence or structural similarity /// 0043066 // negative regulation of apoptotic process // inferred from sequence or structural similarity /// 0043154 // negative regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from sequence or structural similarity /// 0045415 // negative regulation of interleukin-8 biosynthetic process // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0051247 // positive regulation of protein metabolic process // inferred from sequence or structural similarity /// 0060761 // negative regulation of response to cytokine stimulus // inferred from sequence or structural similarity /// 0070375 // ERK5 cascade // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from sequence or structural similarity /// 0071499 // cellular response to laminar fluid shear stress // traceable author statement /// 0090051 // negative regulation of cell migration involved in sprouting angiogenesis // inferred from sequence or structural similarity /// 2000342 // negative regulation of chemokine (C-X-C motif) ligand 2 production // inferred from sequence or structural similarity","0005634 // nucleus // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004707 // MAP kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:67834943-68099452 (+) // 91.8 // q23"]
["11763442_a_at",240.68958,234.91852,228.8567,228.30956,235.51683,231.55441,0.045418262,0.010404587,-0.027310848,-0.03076458,0.014074802,-0.010404587,0.76778066,0.494374,1.0129306,0.018535377,1.0129306,"up","NR2C1",7181,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // traceable author statement /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0048386 // positive regulation of retinoic acid receptor signaling pathway // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016605 // PML body // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // traceable author statement /// 0004872 // receptor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:95433799-95435993 (-) // 54.46 // q22"]
["11730522_a_at",10.081592,10.372269,9.806643,10.278644,10.247978,10.773364,-0.025771141,0.015237093,-0.06566334,0.002155304,-0.002155304,0.06997442,0.5292545,0.2142105,-1.0343497,-0.048723996,1.0343497,"down","SLITRK2",84631,"0007409 // axonogenesis // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chrX:144899346-144907358 (+) // 95.76 // q27.3"]
["11734322_at",9.068835,7.9037967,8.013001,8.345513,8.104786,9.111767,0.14102983,-0.057341576,-0.037544727,0.021113396,-0.021113396,0.14784336,0.8800324,0.6969719,-1.0237759,-0.0339,1.0237759,"down","BMP3",651,"0001501 // skeletal system development // traceable author statement /// 0001503 // ossification // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0040007 // growth // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051216 // cartilage development // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0031988 // membrane-bounded vesicle // inferred from electronic annotation","0005102 // receptor binding // traceable author statement /// 0005125 // cytokine activity // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation /// 0070700 // BMP receptor binding // inferred from physical interaction","chr4:81952118-81978685 (+) // 93.95 // q21.21"]
["11728561_a_at",18.168156,25.841946,25.396978,15.583315,19.559864,21.643095,-0.17948961,0.32881308,0.30375528,-0.4008994,-0.0730052,0.0730052,0.57909834,0.25941736,1.2181226,0.28465936,1.2181226,"up","TSNAXIP1",55815,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","","chr16:67841009-67861971 (+) // 97.37 // q22.1"]
["11764183_at",18.56654,21.847065,25.480915,26.191645,24.586466,24.27578,-0.39598608,-0.16125154,0.060726166,0.10041571,0.009173393,-0.009173393,0.53307825,0.21768,-1.147883,-0.19897567,1.147883,"down",0.10041571,0.009173393,-0.009173393,-0.39598608,-0.16125154,0.060726166]
["11757477_s_at",4423.976,4584.6255,4547.719,4749.689,5088.1494,4969.9136,-0.07697487,-0.025514603,-0.03717518,0.025514603,0.12482357,0.09090233,0.15576145,0.018425228,-1.0919967,-0.12696846,1.0919967,"down","LASP1",3927,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from sequence or structural similarity /// 0006811 // ion transport // inferred from electronic annotation /// 0034220 // ion transmembrane transport // inferred from sequence or structural similarity /// 0034220 // ion transmembrane transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0030864 // cortical actin cytoskeleton // inferred from sequence or structural similarity /// 0030864 // cortical actin cytoskeleton // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0015075 // ion transmembrane transporter activity // inferred from sequence or structural similarity /// 0015075 // ion transmembrane transporter activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from electronic annotation","chr17:37077627-37078023 (+) // 89.51 // q12"]
["11762960_at",29.43113,21.804243,22.374739,27.913042,26.816021,28.59336,0.1053257,-0.3274083,-0.29014635,0.028922081,-0.028922081,0.063663006,0.56432825,0.24518675,-1.1423178,-0.19196403,1.1423178,"down","C3orf67",200844,"","","","chr3:58873071-59035485 (-) // 99.89 // p14.2"]
["11762969_x_at",55.88614,54.724377,54.82819,58.47141,62.30115,72.05062,-0.03262043,-0.062927246,-0.06019354,0.032619953,0.12414789,0.33389997,0.31282267,0.074185744,-1.1610818,-0.2154696,1.1610818,"down","MEI1",150365,"0007126 // meiosis // inferred from electronic annotation /// 0007141 // male meiosis I // inferred from electronic annotation /// 0007276 // gamete generation // inferred from electronic annotation /// 0007286 // spermatid development // inferred from electronic annotation","","","chr22:42177418-42190052 (+) // 84.49 // q13.2"]
["11743298_a_at",319.73907,324.269,313.88956,371.05618,381.03787,374.3291,-0.11751938,-0.09722328,-0.14415741,0.09722328,0.13551998,0.109892845,0.022745857,0.00018759632,-1.1759652,-0.23384535,1.1759652,"down","CNOT6",57472,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003723 // RNA binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0004535 // poly(A)-specific ribonuclease activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:179921403-180005404 (+) // 97.37 // q35.3"]
["11716857_at",52.71649,57.05634,61.375153,64.97548,64.622284,66.26743,-0.25658846,-0.14245558,-0.03718853,0.04505253,0.03718853,0.073456764,0.22129269,0.03734963,-1.1465586,-0.19731015,1.1465586,"down","SUPT7L",9913,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0051457 // maintenance of protein location in nucleus // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0030914 // STAGA complex // inferred from direct assay","0003713 // transcription coactivator activity // inferred from direct assay /// 0004402 // histone acetyltransferase activity // inferred from direct assay","chr2:27873002-27886707 (-) // 84.48 // p23.3"]
["11756496_a_at",13.265019,14.806427,14.062027,13.4086485,13.3039,14.601845,-0.049857378,0.108739614,0.034320593,-0.034320593,-0.045634985,0.08866644,0.87074775,0.67719907,1.0197136,0.028164066,1.0197136,"up","SERPINA6",866,"0006810 // transport // inferred from electronic annotation /// 0008211 // glucocorticoid metabolic process // inferred from electronic annotation /// 0010951 // negative regulation of endopeptidase activity // not recorded /// 0030162 // regulation of proteolysis // not recorded","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // not recorded /// 0005615 // extracellular space // inferred from electronic annotation","0004867 // serine-type endopeptidase inhibitor activity // not recorded /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // traceable author statement /// 0005496 // steroid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation","chr14:94770585-94781004 (-) // 90.55 // q32.13"]
["11735093_a_at",134.14894,113.11711,124.592415,124.85059,123.64649,120.67662,0.11211681,-0.1339016,0.0054969788,0.008483887,-0.0054974556,-0.04057312,0.9742764,0.9269112,1.0049332,0.00709966,1.0049332,"up","TOM1L2",146691,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","","chr17:17746822-17875784 (-) // 99.02 // p11.2"]
["11761199_x_at",26.089806,25.490156,26.31854,32.174255,23.147408,27.675352,-0.0062966347,-0.039842606,0.0062966347,0.29612398,-0.17893219,0.0788188,0.8302448,0.5993327,-1.0560058,-0.078617804,1.0560058,"down","C5orf25",375484,"","","","chr5:175665402-175723323 (+) // 86.23 // q35.2"]
["11729888_a_at",8.25602,8.8262,9.75334,8.156002,10.219486,11.709676,-0.1683979,-0.07205176,0.072052,-0.18598199,0.13940644,0.33578515,0.7118199,0.41379175,-1.1115215,-0.15253583,1.1115215,"down","FAM5C",339479,"0007399 // nervous system development // inferred from electronic annotation /// 0045786 // negative regulation of cell cycle // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","","chr1:190066796-190447012 (-) // 99.49 // q31.1"]
["11731969_at",29.339514,39.021923,35.256054,36.598442,41.654972,43.505238,-0.3651886,0.046251297,-0.100162506,-0.046251297,0.14045525,0.20315552,0.46901444,0.16743802,-1.1800269,-0.23881973,1.1800269,"down","SPCS2",9789,"0006112 // energy reserve metabolic process // traceable author statement /// 0006412 // translation // traceable author statement /// 0006465 // signal peptide processing // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005787 // signal peptidase complex // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr11:74660291-74690076 (+) // 73.82 // q13.4"]
["11754285_a_at",73.92802,97.59124,93.81572,94.05621,105.72289,95.91515,-0.3615198,0.03911066,-0.017811775,-0.014118195,0.15457487,0.014118195,0.61078995,0.29066157,-1.1211132,-0.16493192,1.1211132,"down","TTR",7276,"0006810 // transport // inferred from electronic annotation /// 0006810 // transport // non-traceable author statement","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0005179 // hormone activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042562 // hormone binding // inferred from electronic annotation","chr18:29171911-29178783 (+) // 94.43 // q12.1"]
["11723381_a_at",100.866974,99.26315,97.13897,78.13798,86.7229,82.75001,0.13615036,0.11302662,0.08181858,-0.23220778,-0.08181858,-0.14947224,0.08007465,0.004603948,1.2014956,0.26483142,1.2014956,"up","DPY19L4",286148,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr8:95732106-95806064 (+) // 89.94 // q22.1"]
["11747908_s_at",50.24018,31.808369,29.469997,37.5937,25.528206,30.679333,0.6855049,0.026069641,-0.084089756,0.26715422,-0.2912445,-0.026069641,0.7570916,0.47867134,1.1694916,0.22588156,1.1694916,"up","CUL7",9820,"0001570 // vasculogenesis // inferred from sequence or structural similarity /// 0001570 // vasculogenesis // inferred from electronic annotation /// 0006508 // proteolysis // non-traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005680 // anaphase-promoting complex // non-traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0031461 // cullin-RING ubiquitin ligase complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from electronic annotation","chr6:43005357-43021637 (-) // 99.36 // p21.1"]
["11736117_a_at",2213.0747,1983.8894,1957.9487,2359.1292,2360.895,2255.056,-0.013555527,-0.17127609,-0.1902647,0.07864666,0.07972622,0.013555527,0.22501759,0.038685426,-1.1347241,-0.1823416,1.1347241,"down","ZFAND5",7763,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0001944 // vasculature development // inferred from electronic annotation /// 0003016 // respiratory system process // inferred from electronic annotation /// 0010761 // fibroblast migration // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0048745 // smooth muscle tissue development // inferred from electronic annotation /// 0060324 // face development // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:74966340-74980386 (-) // 86.52 // q21.13"]
["11751544_a_at",8.427611,8.973999,10.382991,8.882494,9.752258,9.0314865,-0.09523344,-0.004606247,0.2057929,-0.01939249,0.11537933,0.004606247,0.99492043,0.98637575,1.0012392,0.0017866528,1.0012392,"up","MYO1F",4542,"0002446 // neutrophil mediated immunity // inferred from electronic annotation /// 0007162 // negative regulation of cell adhesion // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0032956 // regulation of actin cytoskeleton organization // inferred from electronic annotation /// 0043312 // neutrophil degranulation // inferred from electronic annotation /// 0045088 // regulation of innate immune response // inferred from electronic annotation /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation","0016459 // myosin complex // inferred from electronic annotation /// 0016461 // unconventional myosin complex // non-traceable author statement /// 0030864 // cortical actin cytoskeleton // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // non-traceable author statement /// 0003779 // actin binding // inferred from electronic annotation /// 0005516 // calmodulin binding // non-traceable author statement /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation","chr19:8616549-8642322 (-) // 99.56 // p13.2"]
["11745694_x_at",12.677029,14.694763,14.856113,17.15388,17.33371,17.231108,-0.33257914,-0.11949372,-0.10373902,0.10373902,0.118784666,0.11021972,0.14541055,0.016040938,-1.2278932,-0.2961851,1.2278932,"down","DFFB",1677,"0006309 // apoptotic DNA fragmentation // inferred from direct assay /// 0006309 // apoptotic DNA fragmentation // inferred from electronic annotation /// 0006309 // apoptotic DNA fragmentation // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0030263 // apoptotic chromosome condensation // inferred from direct assay /// 0035556 // intracellular signal transduction // traceable author statement","0000790 // nuclear chromatin // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0004516 // nicotinate phosphoribosyltransferase activity // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004536 // deoxyribonuclease activity // inferred from electronic annotation /// 0004536 // deoxyribonuclease activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction","chr1:3774167-3800305 (+) // 99.9 // p36.32"]
["11722245_a_at",2742.8884,2723.3923,2734.2224,2398.6665,2517.72,2501.9653,0.066934586,0.056643486,0.062369347,-0.12652874,-0.056643486,-0.06569958,0.06465037,0.0028159635,1.1056845,0.14493981,1.1056845,"up","PTDSS2",81490,"0006659 // phosphatidylserine biosynthetic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from sequence or structural similarity /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003882 // CDP-diacylglycerol-serine O-phosphatidyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr11:450264-491399 (+) // 95.28 // p15.5"]
["11752436_x_at",10.717342,11.694388,11.306085,7.6216373,9.7044,10.523888,0.013139725,0.139009,0.090292215,-0.47863436,-0.13009644,-0.013139725,0.3935959,0.11700124,1.2210344,0.28810385,1.2210344,"up","MAP9",79884,"0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation","","chr4:156268892-156297988 (-) // 96.23 // q32.1"]
["11735399_at",50.512028,63.72444,55.500828,48.93458,60.087452,57.27495,-0.15857983,0.17664003,-0.022697449,-0.20435238,0.09185696,0.022697926,0.9426354,0.8404999,1.019871,0.028386677,1.019871,"up","VPS13A",23230,"0006810 // transport // inferred from electronic annotation /// 0006895 // Golgi to endosome transport // non-traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0008104 // protein localization // non-traceable author statement /// 0008104 // protein localization // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0035176 // social behavior // inferred from electronic annotation","0005622 // intracellular // non-traceable author statement","0005515 // protein binding // inferred from physical interaction","chr9:79792342-79999952 (+) // 99.02 // q21.2"]
["11726988_s_at",2848.7292,3022.7212,3026.252,3027.4285,3179.3997,3003.2266,-0.086372375,-0.0008420944,0.00084114075,0.0014019012,0.072063446,-0.010177612,0.5857438,0.26578966,-1.0351839,-0.049887095,1.0351839,"down","EIF2AK1",27102,"0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006950 // response to stress // inferred from expression pattern /// 0006950 // response to stress // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009605 // response to external stimulus // inferred from expression pattern /// 0010467 // gene expression // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0017148 // negative regulation of translation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031398 // positive regulation of protein ubiquitination // inferred from electronic annotation /// 0045993 // negative regulation of translational initiation by iron // non-traceable author statement /// 0046777 // protein autophosphorylation // inferred from sequence or structural similarity /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0046986 // negative regulation of hemoglobin biosynthetic process // inferred from sequence or structural similarity /// 0046986 // negative regulation of hemoglobin biosynthetic process // inferred from electronic annotation /// 0060510 // Type II pneumocyte differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004694 // eukaryotic translation initiation factor 2alpha kinase activity // inferred from direct assay /// 0004694 // eukaryotic translation initiation factor 2alpha kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0020037 // heme binding // inferred from sequence or structural similarity /// 0020037 // heme binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr7:6061879-6098860 (-) // 92.26 // p22.1"]
["11733624_at",13.387249,15.231484,16.627283,11.876116,13.775095,15.656625,-0.11369991,0.07249713,0.19899297,-0.2864964,-0.07249713,0.11221361,0.7094357,0.40994886,1.0979837,0.13485666,1.0979837,"up","ZNF831",128611,"","0005622 // intracellular // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:57766074-57834168 (+) // 97.27 // q13.32"]
["11755030_a_at",52.514416,53.186348,60.381878,51.49447,58.178066,58.73085,-0.08305216,-0.06470966,0.11835003,-0.11134815,0.06470966,0.07835293,0.93824977,0.8295613,-1.0142233,-0.020375377,1.0142233,"down","PRRT4",401399,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr7:127990383-128000144 (-) // 95.18 // q32.1"]
["11760926_at",43.26492,41.615616,37.866165,38.25734,38.80015,43.371887,0.1066041,0.050531387,-0.0856843,-0.07085705,-0.050531387,0.11016655,0.9056011,0.7503866,1.0192851,0.027557613,1.0192851,"up","CENPT",80152,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // inferred from mutant phenotype /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from mutant phenotype /// 0007067 // mitosis // inferred from electronic annotation /// 0051276 // chromosome organization // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation /// 0051382 // kinetochore assembly // inferred from mutant phenotype","0000775 // chromosome, centromeric region // inferred from direct assay /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr16:67863959-67867841 (-) // 100.0 // q22.1"]
["11735481_at",11.526803,11.3471,10.743069,11.577159,11.3435755,11.707487,0.011334419,-0.011334419,-0.09025216,0.017623425,-0.011782646,0.033773184,0.5861059,0.2665082,-1.0304601,-0.04328867,1.0304601,"down","NYAP1",222950,"0014065 // phosphatidylinositol 3-kinase cascade // inferred from sequence or structural similarity /// 0048812 // neuron projection morphogenesis // inferred from sequence or structural similarity","","0005515 // protein binding // inferred from sequence or structural similarity","chr7:100081549-100092422 (+) // 98.77 // q22.1"]
["11725344_a_at",111.422455,142.20259,145.47424,134.68286,137.05624,129.05624,-0.2861271,0.06578016,0.09859657,-0.012601376,0.012601376,-0.07416773,0.9662602,0.9057552,-1.0110546,-0.01586096,1.0110546,"down","VPS37A",137492,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral reproduction // traceable author statement /// 0016044 // cellular membrane organization // traceable author statement /// 0016197 // endosomal transport // traceable author statement /// 0046788 // egress of virus within host cell // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","","chr8:17104405-17155532 (+) // 93.26 // p22"]
["11741933_at",7.4070907,8.589596,8.940971,7.111692,7.089517,8.471824,-0.09688258,0.11680055,0.17464185,-0.15559697,-0.16010237,0.09688258,0.6278871,0.30936807,1.1002201,0.13779214,1.1002201,"up","RFPL1",5988,"","","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr22:29834571-29838444 (+) // 100.0 // q12.2"]
["11743032_at",71.7229,66.77699,62.056366,89.9879,84.109314,64.00791,0.05154133,-0.05154133,-0.15731335,0.37883854,0.28137302,-0.11264229,0.5363131,0.22030176,-1.1768748,-0.2349608,1.1768748,"down","CGA",1081,"0006590 // thyroid hormone generation // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0008406 // gonad development // inferred from electronic annotation /// 0016486 // peptide hormone processing // traceable author statement /// 0030878 // thyroid gland development // inferred from electronic annotation /// 0032275 // luteinizing hormone secretion // inferred from electronic annotation /// 0032870 // cellular response to hormone stimulus // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046621 // negative regulation of organ growth // inferred from electronic annotation /// 0046884 // follicle-stimulating hormone secretion // inferred from electronic annotation /// 0048589 // developmental growth // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005625 // soluble fraction // traceable author statement","0005179 // hormone activity // inferred from electronic annotation /// 0005179 // hormone activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr6:87795278-87805125 (-) // 74.04 // q14.3"]
["11750660_a_at",66.89182,60.70206,61.27063,64.0759,65.26085,62.797462,0.07658577,-0.0634985,-0.05004835,0.014538288,0.040973663,-0.014537811,0.8368127,0.61290026,-1.01817,-0.02597846,1.01817,"down","TEP1",7011,"0000722 // telomere maintenance via recombination // inferred from direct assay","0000781 // chromosome, telomeric region // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from sequence or structural similarity /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005697 // telomerase holoenzyme complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016363 // nuclear matrix // inferred from direct assay /// 0030529 // ribonucleoprotein complex // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003720 // telomerase activity // inferred from direct assay /// 0003723 // RNA binding // inferred from sequence or structural similarity /// 0003723 // RNA binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation","chr14:20839713-20850421 (-) // 98.45 // q11.2"]
["11726368_x_at",220.06224,222.32082,214.84003,214.56653,199.03989,206.30267,0.03556776,0.050299168,0.0009188652,-0.0009188652,-0.10928631,-0.057581425,0.30377015,0.069972605,1.060583,0.08485752,1.060583,"up","ERICH1",157697,"","","","chr8:614199-681239 (-) // 97.52 // p23.3"]
["11733342_at",44.44458,60.870064,53.766487,57.80891,51.51032,51.175472,-0.2437768,0.20994806,0.03092289,0.1355071,-0.03092289,-0.04033184,0.9591515,0.88380957,-1.0156379,-0.0223861,1.0156379,"down","IDI2",91734,"0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // traceable author statement /// 0006695 // cholesterol biosynthetic process // inferred from electronic annotation /// 0008299 // isoprenoid biosynthetic process // inferred from direct assay /// 0008299 // isoprenoid biosynthetic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0050992 // dimethylallyl diphosphate biosynthetic process // inferred from electronic annotation","0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004452 // isopentenyl-diphosphate delta-isomerase activity // inferred from direct assay /// 0004452 // isopentenyl-diphosphate delta-isomerase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:1064846-1070686 (-) // 94.4 // p15.3"]
["11718128_x_at",1570.5986,1558.147,1525.4043,1229.5194,1272.8516,1262.4534,0.17268658,0.16120338,0.13056374,-0.18053341,-0.13056374,-0.14239788,0.01829885,9.89127e-5,1.2362607,0.30598295,1.2362607,"up","TK1",7083,"0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0006206 // pyrimidine base metabolic process // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0009165 // nucleotide biosynthetic process // not recorded /// 0016310 // phosphorylation // inferred from electronic annotation /// 0043097 // pyrimidine nucleoside salvage // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051289 // protein homotetramerization // inferred from physical interaction /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004797 // thymidine kinase activity // inferred from electronic annotation /// 0004797 // thymidine kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0019206 // nucleoside kinase activity // not recorded /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:76169995-76183314 (-) // 90.46 // q25.3"]
["11718988_s_at",64.70414,43.463673,49.19452,52.61506,53.645977,58.574795,0.2843852,-0.28966284,-0.110975266,-0.013997078,0.013997078,0.14080715,0.85793716,0.6521261,-1.0611928,-0.08568672,1.0611928,"down","RNASE4",6038,"0006379 // mRNA cleavage // non-traceable author statement /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0004522 // pancreatic ribonuclease activity // non-traceable author statement /// 0004522 // pancreatic ribonuclease activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr14:21152371-21168753 (+) // 90.95 // q11.2"]
["11730247_a_at",28.144594,27.669443,25.20378,29.12715,29.03026,27.865633,0.007185459,-0.017378807,-0.15203238,0.056692123,0.051885128,-0.007185459,0.48113862,0.1763548,-1.0628017,-0.08787247,1.0628017,"down","PVRIG /// STAG3","10734 /// 79037","0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007126 // meiosis // inferred from electronic annotation /// 0007130 // synaptonemal complex assembly // traceable author statement","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000795 // synaptonemal complex // traceable author statement /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030893 // meiotic cohesin complex // inferred from direct assay","","chr7:99816867-99819111 (+) // 91.98 // q22.1"]
["11733434_a_at",6.86002,6.2109985,6.3143125,6.327121,6.184927,6.421388,0.11812544,-0.025262117,-0.0014617443,0.0014617443,-0.031330824,0.022797823,0.7865297,0.5240273,1.0230129,0.032824304,1.0230129,"up","MCF2",4168,"0006915 // apoptotic process // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0016358 // dendrite development // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation","chrX:138663928-138790386 (-) // 99.64 // q27.1"]
["11755530_x_at",21.823082,22.417444,21.70263,23.287031,21.545797,21.39428,0.0039925575,0.04275942,-0.0039925575,0.097664356,-0.014455795,-0.024637222,0.96616364,0.90564513,-1.00366,-0.005270572,1.00366,"down","ZNF34",80778,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:145998502-145999106 (-) // 98.13 // q24.3"]
["11729105_a_at",13.334824,10.388455,10.493803,10.336463,11.422355,12.956244,0.28450012,-0.07571745,-0.06116128,-0.082956076,0.061161518,0.24294877,0.95739627,0.87878364,-1.0171348,-0.02451087,1.0171348,"down","HPCAL4",51440,"0007417 // central nervous system development // traceable author statement","0005622 // intracellular // inferred from direct assay","0005246 // calcium channel regulator activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation","chr1:40144319-40157384 (-) // 91.22 // p34.2"]
["11758339_x_at",47.37155,50.993793,45.54439,40.369522,46.87756,50.797768,0.0075616837,0.113862514,-0.049185753,-0.22319269,-0.0075616837,0.10830593,0.81985474,0.58113897,1.0460093,0.06489568,1.0460093,"up","FLJ45445 /// LOC100128326 /// LOC100132050 /// LOC100132062 /// LOC100287894 /// LOC100289306 /// LOC100506479 /// LOC100508632 /// LOC100652872 /// LOC100652945 /// LOC100653176 /// LOC100653241 /// LOC100653346 /// LOC729737","100128326 /// 100132050 /// 100132062 /// 100287894 /// 100289306 /// 100506479 /// 100508632 /// 100652872 /// 100652945 /// 100653176 /// 100653241 /// 100653346 /// 399844 /// 729737","","","","chr1:326226-326732 (+) // 99.41 // p36.33 /// chr16:90234326-90234832 (+) // 99.01 // q24.3 /// chr3:197945953-197946450 (+) // 98.02 // q29 /// chr5:180752841-180753347 (+) // 99.41 // q35.3 /// chr7:128293015-128293521 (+) // 97.04 // q32.1 /// chr1:137402-137908 (-) // 99.41 // p36.33 /// chr1:662890-663396 (-) // 99.21 // p36.33 /// chr11:129079-129585 (-) // 99.8 // p15.5 /// chr19:200548-201054 (-) // 99.8 // p13.3"]
["11752386_a_at",136.22282,167.71692,155.38861,146.03548,136.05617,120.85644,-0.05017519,0.2498846,0.13973665,0.05017519,-0.051941395,-0.22284937,0.49573213,0.18753485,1.1391996,0.18802056,1.1391996,"up","NAB1",4664,"0001958 // endochondral ossification // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0014037 // Schwann cell differentiation // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation /// 0045682 // regulation of epidermis development // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // non-traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0008134 // transcription factor binding // inferred from electronic annotation","chr2:191513995-191555645 (+) // 99.95 // q32.2"]
["11741789_a_at",1386.3177,1453.7023,1492.8907,1645.3158,1643.5917,1469.5077,-0.0954628,-0.026988983,0.011387825,0.15164375,0.15013123,-0.011387825,0.36169153,0.09886015,-1.0971928,-0.13381702,1.0971928,"down","NDUFB6",4712,"0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0006120 // mitochondrial electron transport, NADH to ubiquinone // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from direct assay /// 0070469 // respiratory chain // inferred from electronic annotation","0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement /// 0008137 // NADH dehydrogenase (ubiquinone) activity // traceable author statement","chr9:32553522-32573182 (-) // 100.0 // p21.1"]
["11748140_s_at",929.22015,811.8893,788.7866,770.0285,748.22235,768.118,0.253747,0.059009552,0.01736164,-0.01736164,-0.05880642,-0.020945549,0.40988192,0.12680532,1.1037478,0.14241062,1.1037478,"up","AMD1",262,"0006557 // S-adenosylmethioninamine biosynthetic process // inferred from electronic annotation /// 0006595 // polyamine metabolic process // traceable author statement /// 0006596 // polyamine biosynthetic process // inferred from electronic annotation /// 0006597 // spermine biosynthetic process // inferred from electronic annotation /// 0006597 // spermine biosynthetic process // non-traceable author statement /// 0008295 // spermidine biosynthetic process // inferred from electronic annotation /// 0008295 // spermidine biosynthetic process // non-traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005829 // cytosol // traceable author statement","0004014 // adenosylmethionine decarboxylase activity // inferred from electronic annotation /// 0004014 // adenosylmethionine decarboxylase activity // traceable author statement /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation","chr6:111195986-111215033 (+) // 97.21 // q21"]
["11741704_x_at",21.994337,19.676527,15.876587,13.109453,12.797221,10.872522,0.60837793,0.44772148,0.13814688,-0.13814688,-0.1729238,-0.40806746,0.14970239,0.016986528,1.5559491,0.63779485,1.5559491,"up","HIST1H2BC /// HIST1H2BE /// HIST1H2BF /// HIST1H2BG /// HIST1H2BI","8339 /// 8343 /// 8344 /// 8346 /// 8347","0006334 // nucleosome assembly // non-traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from electronic annotation","0000786 // nucleosome // non-traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr6:26123583-26124154 (-) // 100.0 // p22.2"]
["11745242_a_at",98.67889,92.46684,77.160706,80.60796,71.39429,69.01368,0.3233466,0.22954178,-0.031527996,0.031527996,-0.14358568,-0.19251156,0.3535595,0.09436843,1.2102541,0.27530995,1.2102541,"up","TNFRSF21",27242,"0006915 // apoptotic process // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051402 // neuron apoptotic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:47200500-47277646 (-) // 97.17 // p12.3"]
["11745995_x_at",27.562832,24.589317,25.258392,23.165562,30.871069,30.98475,0.06298065,-0.10171175,-0.06298065,-0.18776178,0.22651196,0.23181486,0.7369759,0.44783977,-1.0898218,-0.12409227,1.0898218,"down","ADARB2",105,"0006396 // RNA processing // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay","0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // traceable author statement /// 0003727 // single-stranded RNA binding // traceable author statement /// 0004000 // adenosine deaminase activity // inferred from electronic annotation /// 0004000 // adenosine deaminase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:1228073-1246465 (-) // 87.06 // p15.3"]
["11723842_s_at",245.12553,235.56082,225.55621,258.77945,274.22287,266.9717,-0.039101124,-0.096521854,-0.15913486,0.039101124,0.12272692,0.08406496,0.13133888,0.012999611,-1.1330543,-0.18021694,1.1330543,"down","SNX11",29916,"0006810 // transport // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation","0008289 // lipid binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr17:46184910-46201135 (+) // 99.71 // q21.32"]
["11724740_x_at",6884.481,5973.541,6018.8657,5656.091,5188.057,5036.222,0.24415112,0.039390564,0.05029583,-0.03938961,-0.16400146,-0.20685482,0.23196788,0.04090374,1.1875825,0.24802773,1.1875825,"up","HMGN2",3151,"0006325 // chromatin organization // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement","0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0031492 // nucleosomal DNA binding // inferred from electronic annotation","chr1:26798901-26803131 (+) // 90.09 // p36.11"]
["11743434_a_at",168.36186,162.33885,178.8852,180.38959,154.79318,175.70793,-0.030806541,-0.08336401,0.056661606,0.068743706,-0.15203047,0.030807018,0.99432254,0.984177,-1.0011626,-0.0016763725,1.0011626,"down","CHST11",50515,"0002063 // chondrocyte development // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0007585 // respiratory gaseous exchange // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0016051 // carbohydrate biosynthetic process // inferred from electronic annotation /// 0030204 // chondroitin sulfate metabolic process // inferred from electronic annotation /// 0030206 // chondroitin sulfate biosynthetic process // inferred from direct assay /// 0030206 // chondroitin sulfate biosynthetic process // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0033037 // polysaccharide localization // inferred from electronic annotation /// 0035121 // tail morphogenesis // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0048589 // developmental growth // inferred from electronic annotation /// 0048703 // embryonic viscerocranium morphogenesis // inferred from electronic annotation /// 0048704 // embryonic skeletal system morphogenesis // inferred from electronic annotation /// 0051216 // cartilage development // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0001537 // N-acetylgalactosamine 4-O-sulfotransferase activity // inferred from direct assay /// 0008146 // sulfotransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0047756 // chondroitin 4-sulfotransferase activity // inferred from direct assay /// 0047756 // chondroitin 4-sulfotransferase activity // inferred from electronic annotation","chr12:104850777-105155792 (+) // 85.89 // q23.3"]
["11719615_s_at",803.9345,862.306,877.0151,662.35944,778.569,727.38947,0.023126602,0.124248505,0.14865017,-0.25633717,-0.023126602,-0.12122345,0.23062481,0.040476322,1.1746553,0.23223749,1.1746553,"up","LARP4",113251,"0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0022604 // regulation of cell morphogenesis // inferred from mutant phenotype","0030529 // ribonucleoprotein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr12:50794639-50873787 (+) // 97.82 // q13.12"]
["11725488_a_at",184.10214,171.72285,187.97911,165.65828,178.60463,158.30566,0.07208061,-0.028344154,0.102146626,-0.080215454,0.028343678,-0.14571333,0.44483232,0.14951949,1.0825918,0.114489324,1.0825918,"up","ATG14",22863,"0000045 // autophagic vacuole assembly // inferred from mutant phenotype /// 0006914 // autophagy // inferred from electronic annotation /// 0010508 // positive regulation of autophagy // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005776 // autophagic vacuole // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0034045 // pre-autophagosomal structure membrane // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr14:55833109-55878598 (-) // 87.47 // q22.3"]
["11741161_a_at",37.416496,44.27048,34.133812,36.874638,29.424263,38.129185,0.010522842,0.25319338,-0.12195015,-0.010522842,-0.3361454,0.037744045,0.7044452,0.403013,1.1097465,0.1502301,1.1097465,"up","SWT1",54823,"","","","chr1:185126290-185260912 (+) // 99.07 // q25.3"]
["11736515_a_at",29.463804,35.852135,36.035564,38.95432,35.650948,37.149208,-0.28679657,-0.0036811829,0.0036811829,0.11604309,-0.011799812,0.04759121,0.54399395,0.22692572,-1.1066587,-0.14621034,1.1066587,"down","HTR5A",3361,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007187 // G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger // inferred from electronic annotation /// 0007210 // serotonin receptor signaling pathway // inferred from direct assay /// 0007210 // serotonin receptor signaling pathway // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0019933 // cAMP-mediated signaling // inferred from electronic annotation /// 0021766 // hippocampus development // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation","0005791 // rough endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004993 // serotonin receptor activity // inferred from direct assay /// 0004993 // serotonin receptor activity // inferred from electronic annotation /// 0004993 // serotonin receptor activity // traceable author statement","chr7:154861775-154879100 (+) // 91.84 // q36.2"]
["11754774_s_at",425.14792,393.62262,365.79962,368.0928,342.8973,359.9954,0.2124033,0.1012516,-0.0045080185,0.0045080185,-0.097784996,-0.027583122,0.37852687,0.108258426,1.1044558,0.14333571,1.1044558,"up","NPAS2",4862,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007417 // central nervous system development // traceable author statement /// 0042745 // circadian sleep/wake cycle // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045475 // locomotor rhythm // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from genetic interaction /// 0048511 // rhythmic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from physical interaction /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003677 // DNA binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0051879 // Hsp90 protein binding // inferred from direct assay","chr2:101610452-101612446 (+) // 98.52 // q11.2"]
["11720404_at",76.729515,73.22287,77.99825,64.538506,69.654526,70.18886,0.098012924,0.030525684,0.12167406,-0.15160799,-0.04155159,-0.030526161,0.19504178,0.028895956,1.1157131,0.15796612,1.1157131,"up","EFNB2",1948,"0001525 // angiogenesis // inferred from electronic annotation /// 0001945 // lymph vessel development // inferred from electronic annotation /// 0002042 // cell migration involved in sprouting angiogenesis // inferred from direct assay /// 0007155 // cell adhesion // inferred from direct assay /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0048013 // ephrin receptor signaling pathway // inferred from direct assay /// 0050920 // regulation of chemotaxis // inferred from direct assay","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005102 // receptor binding // inferred from electronic annotation /// 0046875 // ephrin receptor binding // inferred from physical interaction /// 0046875 // ephrin receptor binding // traceable author statement","chr13:107142097-107187462 (-) // 96.83 // q33.3"]
["11716279_x_at",683.0565,447.59802,443.6836,540.7873,373.4749,403.6437,0.6161375,0.006336212,-0.006336212,0.27919388,-0.2548561,-0.14278507,0.7043326,0.40286484,1.1849791,0.24486159,1.1849791,"up","CBX5",23468,"0007596 // blood coagulation // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation","0000118 // histone deacetylase complex // inferred from sequence or structural similarity /// 0000118 // histone deacetylase complex // inferred from electronic annotation /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005720 // nuclear heterochromatin // traceable author statement /// 0005720 // nuclear heterochromatin // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0010369 // chromocenter // inferred from electronic annotation /// 0016605 // PML body // inferred from mutant phenotype /// 0017053 // transcriptional repressor complex // inferred from sequence or structural similarity /// 0017053 // transcriptional repressor complex // inferred from electronic annotation /// 0031618 // nuclear centromeric heterochromatin // non-traceable author statement /// 0035097 // histone methyltransferase complex // inferred from sequence or structural similarity /// 0035097 // histone methyltransferase complex // inferred from electronic annotation","0003682 // chromatin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0030674 // protein binding, bridging // inferred from sequence or structural similarity /// 0030674 // protein binding, bridging // inferred from electronic annotation /// 0035064 // methylated histone residue binding // inferred from direct assay /// 0042826 // histone deacetylase binding // inferred from electronic annotation /// 0070491 // repressing transcription factor binding // inferred from sequence or structural similarity /// 0070491 // repressing transcription factor binding // inferred from electronic annotation","chr12:54624727-54653329 (-) // 86.67 // q13.13"]
["11740011_at",32.36008,32.05032,28.72627,36.912144,47.12584,37.11136,-0.094940186,-0.10881662,-0.26678467,0.094940186,0.4473629,0.10270548,0.24199641,0.04450441,-1.2940111,-0.37185,1.2940111,"down","ZFP14",57677,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:36827161-36858875 (-) // 51.76 // q13.12"]
["11758061_s_at",23.913721,25.796026,23.620176,23.83653,28.961058,19.061474,0.0023322105,0.11164236,-0.015486717,-0.0023322105,0.27860785,-0.32484674,0.924228,0.7975516,1.0345616,0.049019597,1.0345616,"up","LINC00472",79940,"","","","chr6:72124150-72124589 (-) // 91.39 // q13"]
["11757510_x_at",775.1719,701.3473,693.43933,767.68805,743.8235,698.1265,0.10197163,-0.04241562,-0.058774948,0.0879755,0.04241562,-0.049056053,0.8821471,0.7009493,-1.0187862,-0.026851311,1.0187862,"down","HP1BP3",50809,"0006334 // nucleosome assembly // inferred from electronic annotation","0000786 // nucleosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation","chr1:21069454-21070150 (-) // 56.47 // p36.12"]
["11725743_s_at",13.314024,16.482012,15.135468,14.039419,17.292555,11.479812,-0.13076162,0.1771841,0.054224968,-0.054224968,0.2464428,-0.3446095,0.8739543,0.68415964,1.0602072,0.08434631,1.0602072,"up","SORBS1",10580,"0006810 // transport // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0007160 // cell-matrix adhesion // traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0015758 // glucose transport // inferred from sequence or structural similarity /// 0032869 // cellular response to insulin stimulus // inferred from sequence or structural similarity /// 0043149 // stress fiber assembly // inferred from sequence or structural similarity /// 0045725 // positive regulation of glycogen biosynthetic process // inferred from sequence or structural similarity /// 0046326 // positive regulation of glucose import // inferred from sequence or structural similarity /// 0046889 // positive regulation of lipid biosynthetic process // inferred from sequence or structural similarity /// 0048041 // focal adhesion assembly // inferred from sequence or structural similarity /// 0090004 // positive regulation of establishment of protein localization in plasma membrane // inferred from sequence or structural similarity","0001725 // stress fiber // inferred from sequence or structural similarity /// 0001725 // stress fiber // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005899 // insulin receptor complex // inferred from direct assay /// 0005912 // adherens junction // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from sequence or structural similarity /// 0005913 // cell-cell adherens junction // traceable author statement /// 0005915 // zonula adherens // traceable author statement /// 0005924 // cell-substrate adherens junction // inferred from sequence or structural similarity /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045121 // membrane raft // inferred from sequence or structural similarity","0003779 // actin binding // traceable author statement /// 0005070 // SH3/SH2 adaptor activity // inferred by curator /// 0005070 // SH3/SH2 adaptor activity // inferred from sequence or structural similarity /// 0005158 // insulin receptor binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // traceable author statement /// 0019901 // protein kinase binding // inferred from electronic annotation","chr10:97071530-97321171 (-) // 98.14 // q24.1"]
["11755523_a_at",122.65249,150.86586,152.91606,145.32161,137.83324,155.26535,-0.27168083,0.02700901,0.046482086,-0.02700901,-0.10333395,0.06847811,0.8866686,0.7113257,-1.031999,-0.04544156,1.031999,"down","RBM47",54502,"","0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr4:40426460-40468718 (-) // 93.19 // p14"]
["11753747_x_at",522.4527,536.8895,504.15186,502.72418,486.79605,483.7486,0.053487778,0.09281254,0.0020456314,-0.0020456314,-0.048495293,-0.0575552,0.26411343,0.0528815,1.0610412,0.08548073,1.0610412,"up","CHRAC1",54108,"0006338 // chromatin remodeling // non-traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0008622 // epsilon DNA polymerase complex // non-traceable author statement /// 0008623 // chromatin accessibility complex // non-traceable author statement","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003887 // DNA-directed DNA polymerase activity // non-traceable author statement /// 0003887 // DNA-directed DNA polymerase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr8:141521598-141525346 (+) // 100.0 // q24.3"]
["11736605_a_at",566.68427,461.45865,430.57825,612.37244,462.16507,445.5555,0.2952404,-0.0011034012,-0.101029396,0.4071045,0.0011034012,-0.05169964,0.91957176,0.7859039,-1.0384753,-0.054466866,1.0384753,"down","XPO7",23039,"0006611 // protein export from nucleus // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from direct assay /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005049 // nuclear export signal receptor activity // inferred from direct assay /// 0008565 // protein transporter activity // inferred from electronic annotation","chr8:21823748-21864091 (+) // 97.03 // p21.3"]
["11728770_at",6.857108,6.607591,6.9824247,6.190768,6.440218,6.879112,0.026737928,-0.026737928,0.052865744,-0.12074399,-0.06375289,0.03135991,0.5620782,0.24293563,1.0487477,0.06866759,1.0487477,"up","CFHR2",3080,"","0005576 // extracellular region // inferred from electronic annotation","","chr1:196912897-196928356 (+) // 97.8 // q31.3"]
["11746123_x_at",474.38342,487.49933,489.05573,501.31015,489.38947,504.5259,-0.04443741,-0.0050907135,-0.00049209595,0.035212517,0.00049209595,0.04443741,0.34171793,0.0881195,-1.0305307,-0.043387473,1.0305307,"down","YY1AP1",55249,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:155629246-155658085 (-) // 91.51 // q22"]
["11747846_s_at",9.422066,9.821738,9.2360525,7.623377,10.124046,9.406104,0.0012230873,0.06115794,-0.027544022,-0.3043902,0.10489392,-0.0012233257,0.8107047,0.56512165,1.0559335,0.07851895,1.0559335,"up","KHDRBS2",202559,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008143 // poly(A) RNA binding // inferred from electronic annotation /// 0008266 // poly(U) RNA binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0042169 // SH2 domain binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr6:62390261-62996132 (-) // 95.04 // q11.1"]
["11737290_at",6.0824733,7.458167,6.177817,6.09719,6.8476787,6.6363044,-0.07408047,0.22008252,-0.051641464,-0.07059407,0.09687638,0.051641464,0.9868538,0.96160054,1.0038049,0.0054789255,1.0038049,"up","OXGR1",27199,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0035589 // G-protein coupled purinergic nucleotide receptor signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0045028 // G-protein coupled purinergic nucleotide receptor activity // inferred from electronic annotation","chr13:97637972-97646604 (-) // 92.05 // q32.1"]
["11734188_x_at",8.877425,8.732241,8.949923,9.2460985,11.368394,9.497486,-0.035218716,-0.05900812,-0.023484707,0.023484707,0.32159686,0.062185764,0.42517292,0.1366786,-1.128959,-0.17499301,1.128959,"down","GP6",51206,"0007167 // enzyme linked receptor protein signaling pathway // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007596 // blood coagulation // inferred from electronic annotation /// 0007599 // hemostasis // inferred from electronic annotation /// 0030168 // platelet activation // non-traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0050900 // leukocyte migration // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // traceable author statement","chr19:55525212-55544233 (-) // 67.58 // q13.42"]
["11764176_at",10.476415,9.98389,10.827341,13.291982,10.308495,10.885001,-0.023766994,-0.093238354,0.023766756,0.31964397,-0.04707861,0.03142929,0.63690305,0.31935358,-1.096124,-0.13241108,1.096124,"down","","","","","","chr6:30644213-30644652 (+) // 100.0 // p21.33"]
["11733796_s_at",457.41394,454.1639,437.03082,360.3878,350.58975,370.0925,0.18568993,0.17540264,0.119924545,-0.15826035,-0.19802666,-0.119924545,0.030676428,0.00046718447,1.2475315,0.31907627,1.2475315,"up","RCAN1",1827,"0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007417 // central nervous system development // traceable author statement /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008015 // blood circulation // traceable author statement /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0019722 // calcium-mediated signaling // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0043666 // regulation of phosphoprotein phosphatase activity // inferred from electronic annotation /// 0048741 // skeletal muscle fiber development // inferred from electronic annotation /// 0051151 // negative regulation of smooth muscle cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr21:35888781-35899308 (-) // 98.83 // q22.12"]
["11737484_at",27.420185,26.141518,27.696041,32.902054,28.285074,32.40463,-0.029622078,-0.09851742,-0.015180588,0.23331738,0.015180588,0.21133947,0.2646268,0.0530624,-1.1495367,-0.20105256,1.1495367,"down","C9orf129",445577,"","","","chr9:96080471-96108696 (-) // 98.73 // q22.31"]
["11719784_x_at",88.1039,76.457344,72.94395,114.10476,93.45323,93.02681,-0.03922081,-0.24377108,-0.31163788,0.3338604,0.045818806,0.03922081,0.27256677,0.056422617,-1.2638658,-0.3378433,1.2638658,"down","RPS23",6228,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // non-traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from electronic annotation /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr5:81569560-81574396 (-) // 67.09 // q14.2"]
["11724811_at",53.175255,45.15525,45.15525,46.13074,39.231174,36.08437,0.2358613,0,0,0.030834675,-0.20289326,-0.3235197,0.4222962,0.13484068,1.1841183,0.24381319,1.1841183,"up","ZNF346",23567,"0006915 // apoptotic process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred from direct assay /// 0003725 // double-stranded RNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:176449689-176493947 (+) // 79.63 // q35.2"]
["11747394_a_at",189.98833,188.70122,198.46562,209.59204,222.1656,191.2631,-0.036313057,-0.046120167,0.02666521,0.10536003,0.18941116,-0.02666521,0.4882936,0.18185058,-1.0777018,-0.10795805,1.0777018,"down","ORC3",23595,"0000075 // cell cycle checkpoint // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation","0000808 // origin recognition complex // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005664 // nuclear origin of replication recognition complex // inferred from direct assay /// 0005664 // nuclear origin of replication recognition complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003688 // DNA replication origin binding // traceable author statement","chr6:88299853-88372760 (+) // 99.28 // q15"]
["AFFX-BkGr-GC19_at",60.23109,66.58455,65.12262,58.717575,61.257145,68.38365,-0.06850958,0.076169014,0.04414034,-0.10522604,-0.04414034,0.11463308,0.8967015,0.733046,1.0201946,0.028844438,1.0201946,"up",-0.10522604,-0.04414034,0.11463308,-0.06850958,0.076169014,0.04414034]
["11743755_s_at",186.3367,170.45123,168.55646,212.70158,173.13829,163.12326,0.11727047,-0.011282444,-0.027409554,0.30818892,0.011282921,-0.0746789,0.87168753,0.67977333,-1.0391506,-0.055404745,1.0391506,"down","ZFAND5",7763,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0001944 // vasculature development // inferred from electronic annotation /// 0003016 // respiratory system process // inferred from electronic annotation /// 0010761 // fibroblast migration // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0048745 // smooth muscle tissue development // inferred from electronic annotation /// 0060324 // face development // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:74966044-74980163 (-) // 85.1 // q21.13"]
["11752482_a_at",48.03448,59.19915,50.18198,45.82234,58.032013,58.93836,-0.16793823,0.13356781,-0.104839325,-0.23595762,0.1048398,0.12719822,0.9158275,0.777403,-1.0317523,-0.04509672,1.0317523,"down","FBN2",2201,"0009653 // anatomical structure morphogenesis // traceable author statement /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030501 // positive regulation of bone mineralization // inferred from sequence or structural similarity /// 0030501 // positive regulation of bone mineralization // inferred from electronic annotation /// 0035108 // limb morphogenesis // inferred from electronic annotation /// 0035583 // sequestering of TGFbeta in extracellular matrix // inferred from sequence or structural similarity /// 0035583 // sequestering of TGFbeta in extracellular matrix // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // inferred from sequence or structural similarity /// 0045669 // positive regulation of osteoblast differentiation // inferred from electronic annotation /// 0060346 // bone trabecula formation // inferred from sequence or structural similarity /// 0060346 // bone trabecula formation // inferred from electronic annotation","0001527 // microfibril // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation","0005201 // extracellular matrix structural constituent // inferred from electronic annotation /// 0005201 // extracellular matrix structural constituent // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation","chr5:127777694-127873916 (-) // 95.43 // q23.3"]
["11761283_at",74.56995,69.12284,63.870377,50.359715,55.057453,63.053192,0.23273611,0.12330437,0.009288788,-0.33358812,-0.20492077,-0.009288788,0.2719317,0.056130763,1.2348841,0.30437568,1.2348841,"up","SMYD3",64754,"0016568 // chromatin modification // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0034968 // histone lysine methylation // inferred from sequence or structural similarity /// 0034968 // histone lysine methylation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from sequence or structural similarity /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:246489117-246670614 (-) // 97.02 // q44"]
["11740955_a_at",40.28226,35.08289,33.030552,34.157772,32.668537,33.566,0.2505374,0.051160336,-0.03580618,0.012606621,-0.05170536,-0.012606621,0.60954624,0.28957903,1.0761399,0.10586568,1.0761399,"up","PLEKHN1",84069,"","","0005543 // phospholipid binding // inferred from electronic annotation","chr1:901876-910478 (+) // 98.84 // p36.33"]
["11757435_x_at",1811.4681,1660.5582,1576.0848,1704.47,1627.4462,1574.8195,0.14002037,0.014529228,-0.060793877,0.052184105,-0.014529228,-0.06195259,0.82488245,0.59001815,1.0276515,0.039351165,1.0276515,"up","BIN1",274,"0006897 // endocytosis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0030100 // regulation of endocytosis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042692 // muscle cell differentiation // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045807 // positive regulation of endocytosis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0043196 // varicosity // inferred from electronic annotation /// 0043679 // axon terminus // inferred from electronic annotation /// 0044300 // cerebellar mossy fiber // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0051020 // GTPase binding // inferred from electronic annotation","chr2:127805606-127806095 (-) // 99.8 // q14.3"]
["11727991_at",71.29358,62.917793,61.24587,69.84811,64.99595,64.00893,0.14446115,-0.035842896,-0.07469845,0.114910126,0.01103878,-0.011038303,0.903366,0.74634,-1.0188891,-0.026996987,1.0188891,"down","STX11",8676,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006944 // cellular membrane fusion // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005484 // SNAP receptor activity // inferred from electronic annotation /// 0005484 // SNAP receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr6:144471653-144513075 (+) // 80.96 // q24.2"]
["11732980_x_at",14.730987,13.972864,15.824403,13.375486,15.878776,15.173003,-0.021326303,-0.0975523,0.08197093,-0.16058874,0.086919546,0.021326542,0.9853897,0.9573821,1.0035726,0.005144963,1.0035726,"up","IFNA21",3452,"0006952 // defense response // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement /// 0060338 // regulation of type I interferon-mediated signaling pathway // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0005126 // cytokine receptor binding // inferred from electronic annotation /// 0005126 // cytokine receptor binding // traceable author statement","chr9:21165635-21166659 (-) // 86.94 // p21.3"]
["11730647_at",17.093643,19.278717,20.404755,14.075149,17.716665,16.790462,-0.025823593,0.14772558,0.22962189,-0.30613303,0.025823593,-0.051641464,0.43555915,0.14340517,1.1710681,0.22782494,1.1710681,"up","SIRPD",128646,"","0005576 // extracellular region // inferred from electronic annotation","","chr20:1514897-1538392 (-) // 88.83 // p13"]
["11761707_x_at",13.195129,14.257639,12.787173,16.867985,15.447733,13.679835,-0.08188748,0.029842138,-0.1271956,0.27239466,0.14550209,-0.029842138,0.41416338,0.12951435,-1.1400511,-0.18909852,1.1400511,"down","PTPLA",9200,"0006470 // protein dephosphorylation // traceable author statement /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0016829 // lyase activity // inferred from electronic annotation","chr10:17644904-17659373 (-) // 79.49 // p12.33"]
["11760263_x_at",61.317142,81.02953,73.02539,61.056404,69.46058,82.225945,-0.21600628,0.1861515,0.036101818,-0.22215319,-0.036101818,0.2072978,0.9704142,0.9165645,1.0133047,0.019068072,1.0133047,"up","STARD3",10948,"0006629 // lipid metabolic process // traceable author statement /// 0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006701 // progesterone biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006839 // mitochondrial transport // traceable author statement /// 0006869 // lipid transport // inferred from electronic annotation /// 0008202 // steroid metabolic process // traceable author statement /// 0008203 // cholesterol metabolic process // traceable author statement /// 0030301 // cholesterol transport // inferred from electronic annotation","0005737 // cytoplasm // traceable author statement /// 0005768 // endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","0008289 // lipid binding // inferred from electronic annotation /// 0015485 // cholesterol binding // inferred from direct assay /// 0015485 // cholesterol binding // inferred from electronic annotation /// 0017127 // cholesterol transporter activity // inferred from electronic annotation","chr17:37793391-37819708 (+) // 98.92 // q12"]
["11737751_x_at",234.29291,243.99068,236.79597,253.95323,221.88962,248.72298,-0.036921978,0.02159071,-0.02159071,0.07932711,-0.115392685,0.049304485,0.926857,0.8038485,-1.011657,-0.01672023,1.011657,"down","C10orf57",80195,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr10:81838418-81852306 (+) // 95.96 // q22.3"]
["11757332_x_at",4055.1013,3964.6692,3961.1877,4241.724,4262.2534,3988.7222,0.01190567,-0.020632744,-0.021899223,0.076818466,0.0837841,-0.01190567,0.4327329,0.14181876,-1.0423027,-0.059774354,1.0423027,"down","DDX5",1655,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000381 // regulation of alternative nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0016049 // cell growth // non-traceable author statement /// 0033148 // positive regulation of intracellular estrogen receptor signaling pathway // inferred from direct assay /// 0043517 // positive regulation of DNA damage response, signal transduction by p53 class mediator // inferred from mutant phenotype /// 0045667 // regulation of osteoblast differentiation // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0060765 // regulation of androgen receptor signaling pathway // inferred from mutant phenotype /// 0072332 // signal transduction by p53 class mediator resulting in induction of apoptosis // inferred from mutant phenotype /// 2001014 // regulation of skeletal muscle cell differentiation // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003712 // transcription cofactor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0003724 // RNA helicase activity // inferred from mutant phenotype /// 0003724 // RNA helicase activity // non-traceable author statement /// 0003724 // RNA helicase activity // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016818 // hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides // inferred from electronic annotation /// 0030331 // estrogen receptor binding // inferred from direct assay /// 0036002 // pre-mRNA binding // inferred from direct assay /// 0050681 // androgen receptor binding // inferred from direct assay","chr17:62495747-62498171 (-) // 80.03 // q23.3"]
["11746444_at",34.198856,41.74834,48.27505,42.05032,44.44671,46.638065,-0.3381486,-0.050377846,0.15918112,-0.039979935,0.039979935,0.10941124,0.76812714,0.4947482,-1.081414,-0.11291891,1.081414,"down","RPS20",6224,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from electronic annotation /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // inferred from direct assay /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation","chr8:56982261-56987066 (-) // 49.54 // q12.1"]
["11722006_a_at",46.00146,46.825962,47.09084,38.18383,49.931973,50.624897,-0.029697895,-0.0040688515,0.0040688515,-0.29841566,0.08858633,0.108469486,0.9518547,0.866025,1.0166953,0.023887318,1.0166953,"up","KLHL25",64410,"","0005737 // cytoplasm // inferred from direct assay","","chr15:86302556-86338261 (-) // 99.5 // q25.3"]
["11721345_at",282.55228,311.97568,332.471,276.5762,287.826,302.03784,-0.061445236,0.08147049,0.17326546,-0.09228611,-0.034766197,0.034766197,0.6067574,0.28688505,1.0682077,0.095192246,1.0682077,"up","PLEK2",26499,"0030036 // actin cytoskeleton organization // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031258 // lamellipodium membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation","chr14:67853189-67878917 (-) // 95.87 // q23.3"]
["11717524_s_at",789.3896,689.0491,719.26105,755.3866,667.8317,688.2229,0.16517639,-0.030954361,0.030954361,0.10165405,-0.07607651,-0.03268528,0.77605915,0.5066256,1.040609,0.05742809,1.040609,"up","RDX",5962,"0030033 // microvillus assembly // inferred from electronic annotation /// 0045176 // apical protein localization // inferred from electronic annotation /// 0051693 // actin filament capping // inferred from electronic annotation","0001726 // ruffle // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005902 // microvillus // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0019898 // extrinsic to membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0032420 // stereocilium // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation","chr11:110100174-110167701 (-) // 92.23 // q22.3"]
["11723392_a_at",35.96157,34.90926,31.585253,45.312607,36.06913,41.596916,-0.0021543503,-0.045000553,-0.18935919,0.33130217,0.0021543503,0.20786619,0.32594743,0.08058318,-1.1968803,-0.25927892,1.1968803,"down","ALPK3",57538,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007507 // heart development // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation","0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr15:85359910-85416787 (+) // 78.38 // q25.3"]
["11717236_x_at",14128.985,13494.351,13387.448,14720.189,13559.429,13693.552,0.052261353,-0.014041901,-0.025514603,0.11139965,-0.0071001053,0.0071001053,0.77238244,0.5010753,-1.0230653,-0.032898273,1.0230653,"down","RPS7",6201,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006364 // rRNA processing // inferred from mutant phenotype /// 0006412 // translation // inferred by curator /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0042274 // ribosomal small subunit biogenesis // inferred from mutant phenotype /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from direct assay /// 0005840 // ribosome // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // non-traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030686 // 90S preribosome // not recorded /// 0032040 // small-subunit processome // not recorded","0003723 // RNA binding // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr2:3622832-3628093 (+) // 43.59 // p25.3"]
["11745829_a_at",127.13876,109.91114,105.37327,115.609566,106.798256,99.88081,0.23079109,0.020724773,-0.040103912,0.09364796,-0.020724297,-0.11733341,0.73911494,0.45114517,1.0608891,0.085273884,1.0608891,"up","BTAF1",9044,"0045892 // negative regulation of transcription, DNA-dependent // non-traceable author statement","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr10:93683525-93790754 (+) // 97.92 // q23.32"]
["11728000_a_at",77.76825,86.45217,70.87015,72.61481,68.91469,67.586685,0.11645985,0.26918125,-0.017542839,0.017542362,-0.05790949,-0.085981846,0.4237685,0.13573118,1.1210229,0.1648158,1.1210229,"up","CERS1 /// GDF1","10715 /// 2657","0001701 // in utero embryonic development // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007492 // endoderm development // inferred from electronic annotation /// 0007498 // mesoderm development // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0030148 // sphingolipid biosynthetic process // traceable author statement /// 0040007 // growth // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046513 // ceramide biosynthetic process // inferred from electronic annotation /// 0046513 // ceramide biosynthetic process // inferred from sequence or structural similarity","0000139 // Golgi membrane // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005792 // microsome // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation /// 0050291 // sphingosine N-acyltransferase activity // inferred from electronic annotation /// 0050291 // sphingosine N-acyltransferase activity // inferred from sequence or structural similarity","chr19:18988717-19006953 (-) // 85.91 // p13.11"]
["11739424_a_at",9.270106,7.34398,7.3957887,7.290239,7.032875,8.011196,0.33095288,-0.0050709248,0.0050709248,-0.015666962,-0.06751847,0.12038469,0.75344956,0.47311965,1.0702277,0.09791783,1.0702277,"up","DPYSL5",56896,"0006208 // pyrimidine base catabolic process // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0030182 // neuron differentiation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0016787 // hydrolase activity // inferred from electronic annotation /// 0016810 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds // inferred from electronic annotation /// 0016812 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides // inferred from electronic annotation","chr2:27070968-27173219 (+) // 89.78 // p23.3"]
["11727295_a_at",157.12447,151.6701,153.6564,176.28522,160.17609,179.22429,-0.013875961,-0.064846516,-0.04607582,0.15212822,0.0138754845,0.17598248,0.23492081,0.04181443,-1.1138808,-0.1555948,1.1138808,"down","ZNF434",54925,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:3432085-3447793 (-) // 96.36 // p13.3"]
["11760347_x_at",97.7219,110.81844,117.0562,106.982635,130.18929,149.74734,-0.22094584,-0.039501667,0.039501667,-0.09032297,0.19291115,0.39483023,0.5238816,0.20986454,-1.1805464,-0.23945475,1.1805464,"down","HES1",3280,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0003151 // outflow tract morphogenesis // inferred from sequence or structural similarity /// 0003151 // outflow tract morphogenesis // inferred from electronic annotation /// 0003266 // regulation of secondary heart field cardioblast proliferation // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from sequence or structural similarity /// 0003281 // ventricular septum development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006461 // protein complex assembly // inferred from sequence or structural similarity /// 0006461 // protein complex assembly // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from direct assay /// 0007219 // Notch signaling pathway // inferred from mutant phenotype /// 0007219 // Notch signaling pathway // traceable author statement /// 0007224 // smoothened signaling pathway // inferred from electronic annotation /// 0007262 // STAT protein import into nucleus // inferred from sequence or structural similarity /// 0007262 // STAT protein import into nucleus // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from sequence or structural similarity /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0021537 // telencephalon development // inferred from electronic annotation /// 0021555 // midbrain-hindbrain boundary morphogenesis // inferred from electronic annotation /// 0021557 // oculomotor nerve development // inferred from electronic annotation /// 0021558 // trochlear nerve development // inferred from electronic annotation /// 0021575 // hindbrain morphogenesis // inferred from electronic annotation /// 0021861 // forebrain radial glial cell differentiation // inferred from sequence or structural similarity /// 0021915 // neural tube development // inferred from electronic annotation /// 0021983 // pituitary gland development // inferred from electronic annotation /// 0021984 // adenohypophysis development // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030513 // positive regulation of BMP signaling pathway // inferred from electronic annotation /// 0030901 // midbrain development // inferred from electronic annotation /// 0031016 // pancreas development // inferred from electronic annotation /// 0031018 // endocrine pancreas development // traceable author statement /// 0035019 // somatic stem cell maintenance // inferred from electronic annotation /// 0042102 // positive regulation of T cell proliferation // inferred from electronic annotation /// 0042491 // auditory receptor cell differentiation // inferred from electronic annotation /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from sequence or structural similarity /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from electronic annotation /// 0042668 // auditory receptor cell fate determination // inferred from electronic annotation /// 0043388 // positive regulation of DNA binding // inferred from sequence or structural similarity /// 0043388 // positive regulation of DNA binding // inferred from electronic annotation /// 0045165 // cell fate commitment // inferred from electronic annotation /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045598 // regulation of fat cell differentiation // inferred from electronic annotation /// 0045608 // negative regulation of auditory receptor cell differentiation // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045747 // positive regulation of Notch signaling pathway // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046331 // lateral inhibition // inferred from electronic annotation /// 0046427 // positive regulation of JAK-STAT cascade // inferred from sequence or structural similarity /// 0046427 // positive regulation of JAK-STAT cascade // inferred from electronic annotation /// 0048469 // cell maturation // inferred from electronic annotation /// 0048505 // regulation of timing of cell differentiation // inferred from electronic annotation /// 0048538 // thymus development // inferred from sequence or structural similarity /// 0048538 // thymus development // inferred from electronic annotation /// 0048667 // cell morphogenesis involved in neuron differentiation // inferred from electronic annotation /// 0048711 // positive regulation of astrocyte differentiation // inferred from sequence or structural similarity /// 0048711 // positive regulation of astrocyte differentiation // inferred from electronic annotation /// 0048715 // negative regulation of oligodendrocyte differentiation // inferred from sequence or structural similarity /// 0048715 // negative regulation of oligodendrocyte differentiation // inferred from electronic annotation /// 0048844 // artery morphogenesis // inferred from sequence or structural similarity /// 0048844 // artery morphogenesis // inferred from electronic annotation /// 0050767 // regulation of neurogenesis // inferred from electronic annotation /// 0060037 // pharyngeal system development // inferred from sequence or structural similarity /// 0060037 // pharyngeal system development // inferred from electronic annotation /// 0060164 // regulation of timing of neuron differentiation // inferred from electronic annotation /// 0060253 // negative regulation of glial cell proliferation // inferred from sequence or structural similarity /// 0060253 // negative regulation of glial cell proliferation // inferred from electronic annotation /// 0060675 // ureteric bud morphogenesis // inferred from electronic annotation /// 0061009 // common bile duct development // inferred from electronic annotation /// 0061106 // negative regulation of stomach neuroendocrine cell differentiation // inferred from electronic annotation /// 0061309 // cardiac neural crest cell development involved in outflow tract morphogenesis // inferred from electronic annotation /// 0072012 // glomerulus vasculature development // inferred from electronic annotation /// 0072049 // comma-shaped body morphogenesis // inferred from electronic annotation /// 0072050 // S-shaped body morphogenesis // inferred from electronic annotation /// 0072141 // renal interstitial cell development // inferred from electronic annotation /// 0072282 // metanephric nephron tubule morphogenesis // inferred from electronic annotation /// 0090102 // cochlea development // inferred from electronic annotation /// 0097084 // vascular smooth muscle cell development // inferred from sequence or structural similarity /// 0097084 // vascular smooth muscle cell development // inferred from electronic annotation /// 0097150 // neuronal stem cell maintenance // inferred from expression pattern /// 0097150 // neuronal stem cell maintenance // inferred from electronic annotation /// 2000227 // negative regulation of pancreatic A cell differentiation // inferred from electronic annotation /// 2000737 // negative regulation of stem cell differentiation // inferred from mutant phenotype /// 2000974 // negative regulation of pro-B cell differentiation // inferred from mutant phenotype /// 2000978 // negative regulation of forebrain neuron differentiation // inferred from sequence or structural similarity /// 2000981 // negative regulation of inner ear receptor cell differentiation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from sequence or structural similarity /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // non-traceable author statement /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0042826 // histone deacetylase binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from sequence or structural similarity /// 0071820 // N-box binding // inferred from sequence or structural similarity /// 0071820 // N-box binding // inferred from electronic annotation","chr3:193853936-193855073 (+) // 99.21 // q29"]
["11755631_x_at",104.60261,90.82411,94.41259,95.19186,97.453674,88.389565,0.14193773,-0.06183386,-0.00592947,0.005928993,0.03980732,-0.10103321,0.8261664,0.59172213,1.0303662,0.04315715,1.0303662,"up","RMND1",55005,"","0005739 // mitochondrion // inferred from electronic annotation","","chr6:151726023-151765760 (-) // 72.76 // q25.1"]
["11734898_at",100.92373,93.64682,103.94252,94.853355,101.03972,74.92747,0.044747353,-0.063216686,0.0872674,-0.04474783,0.04640436,-0.3849511,0.6543418,0.33831698,1.1101061,0.15069759,1.1101061,"up","IPP",3652,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement","0003779 // actin binding // inferred from electronic annotation /// 0003779 // actin binding // traceable author statement","chr1:46162729-46216485 (-) // 84.53 // p34.1"]
["11736559_a_at",10.371298,8.797395,9.529327,9.930735,8.682646,9.554065,0.120280266,-0.11716795,-0.0018701553,0.05765629,-0.13610935,0.0018701553,0.9198382,0.7864109,1.018144,0.025941638,1.018144,"up","MAP2",4133,"0001578 // microtubule bundle formation // inferred from electronic annotation /// 0007026 // negative regulation of microtubule depolymerization // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0016358 // dendrite development // inferred from electronic annotation /// 0018107 // peptidyl-threonine phosphorylation // inferred from electronic annotation /// 0021954 // central nervous system neuron development // inferred from expression pattern /// 0031175 // neuron projection development // inferred from expression pattern /// 0048813 // dendrite morphogenesis // inferred from expression pattern /// 0071310 // cellular response to organic substance // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005875 // microtubule associated complex // traceable author statement /// 0005875 // microtubule associated complex // non-traceable author statement /// 0019718 // rough microsome // inferred from electronic annotation /// 0019719 // smooth microsome // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0034399 // nuclear periphery // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043198 // dendritic shaft // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation","0002162 // dystroglycan binding // inferred from physical interaction /// 0005198 // structural molecule activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0015631 // tubulin binding // inferred from electronic annotation","chr2:210444144-210598834 (+) // 98.23 // q34"]
["11737288_a_at",80.54064,81.209785,79.197266,97.86063,91.1498,94.354004,-0.095229626,-0.08329344,-0.119496346,0.18578196,0.08329344,0.13313723,0.05278257,0.0017588846,-1.1756109,-0.23341064,1.1756109,"down","TIRAP",114609,"0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from sequence or structural similarity /// 0008063 // Toll signaling pathway // traceable author statement /// 0030099 // myeloid cell differentiation // inferred from sequence or structural similarity /// 0030890 // positive regulation of B cell proliferation // inferred from sequence or structural similarity /// 0032496 // response to lipopolysaccharide // inferred from direct assay /// 0032648 // regulation of interferon-beta production // inferred from sequence or structural similarity /// 0032735 // positive regulation of interleukin-12 production // inferred from sequence or structural similarity /// 0032738 // positive regulation of interleukin-15 production // inferred from direct assay /// 0032757 // positive regulation of interleukin-8 production // inferred from mutant phenotype /// 0032760 // positive regulation of tumor necrosis factor production // inferred from mutant phenotype /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034137 // positive regulation of toll-like receptor 2 signaling pathway // inferred from mutant phenotype /// 0034141 // positive regulation of toll-like receptor 3 signaling pathway // inferred from sequence or structural similarity /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034145 // positive regulation of toll-like receptor 4 signaling pathway // inferred from mutant phenotype /// 0035665 // TIRAP-dependent toll-like receptor 4 signaling pathway // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype /// 0044130 // negative regulation of growth of symbiont in host // inferred from sequence or structural similarity /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0045088 // regulation of innate immune response // inferred by curator /// 0045410 // positive regulation of interleukin-6 biosynthetic process // inferred from mutant phenotype /// 0046330 // positive regulation of JNK cascade // inferred from mutant phenotype /// 0050830 // defense response to Gram-positive bacterium // inferred from sequence or structural similarity /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from mutant phenotype /// 0070935 // 3'-UTR-mediated mRNA stabilization // inferred from direct assay /// 0071221 // cellular response to bacterial lipopeptide // inferred from sequence or structural similarity /// 0071223 // cellular response to lipoteichoic acid // inferred from sequence or structural similarity /// 0090023 // positive regulation of neutrophil chemotaxis // inferred from sequence or structural similarity /// 0090073 // positive regulation of protein homodimerization activity // inferred from direct assay /// 2000340 // positive regulation of chemokine (C-X-C motif) ligand 1 production // inferred from sequence or structural similarity /// 2000343 // positive regulation of chemokine (C-X-C motif) ligand 2 production // inferred from sequence or structural similarity","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0030139 // endocytic vesicle // inferred from sequence or structural similarity /// 0032587 // ruffle membrane // inferred from sequence or structural similarity","0005080 // protein kinase C binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from sequence or structural similarity /// 0030674 // protein binding, bridging // non-traceable author statement /// 0035662 // Toll-like receptor 4 binding // inferred from physical interaction /// 0035663 // Toll-like receptor 2 binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0046982 // protein heterodimerization activity // inferred from direct assay","chr11:126152981-126164828 (+) // 92.73 // q24.2"]
["11750600_x_at",6.9515524,5.598222,5.7177596,5.5603747,5.583962,5.8298073,0.29712582,-0.015240669,0.015240669,-0.025027275,-0.018920183,0.04323888,0.69067615,0.38465047,1.0712373,0.09927814,1.0712373,"up","CLCA3P",9629,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0034707 // chloride channel complex // inferred from electronic annotation","0005215 // transporter activity // traceable author statement /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from electronic annotation","chr1:87099958-87121059 (+) // 98.62 // p22.3"]
["11740024_a_at",320.51294,320.30197,310.71017,307.75558,324.97928,280.18015,0.022881508,0.021931648,-0.021931648,-0.035716057,0.04284668,-0.1711464,0.6923829,0.38694665,1.0441284,0.06229916,1.0441284,"up","RUFY1",80230,"0006810 // transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:178986692-179037019 (+) // 99.25 // q35.3"]
["11747399_x_at",93.72392,86.62911,92.36931,71.06216,74.57485,77.8002,0.19110394,0.07753897,0.17010117,-0.20823145,-0.13862371,-0.07753897,0.08352079,0.0050016097,1.2207035,0.2877128,1.2207035,"up","PLAT",5327,"0001666 // response to hypoxia // inferred from electronic annotation /// 0006464 // cellular protein modification process // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0014909 // smooth muscle cell migration // inferred from electronic annotation /// 0031639 // plasminogen activation // inferred from direct assay /// 0035249 // synaptic transmission, glutamatergic // inferred from electronic annotation /// 0042730 // fibrinolysis // traceable author statement /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0045861 // negative regulation of proteolysis // inferred from direct assay /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0030141 // secretory granule // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from direct assay /// 0004252 // serine-type endopeptidase activity // traceable author statement /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr8:42033078-42065083 (-) // 99.75 // p11.21"]
["11717496_a_at",1348.0719,1345.9883,1290.7363,1721.5321,1710.8896,1760.455,-0.17192459,-0.17415619,-0.23462772,0.18087101,0.17192459,0.21312618,0.017883934,9.163144e-5,-1.303337,-0.38221014,1.303337,"down","IMPA2",3613,"0006021 // inositol biosynthetic process // inferred from electronic annotation /// 0006796 // phosphate-containing compound metabolic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation /// 0046855 // inositol phosphate dephosphorylation // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay","0008934 // inositol monophosphate 1-phosphatase activity // inferred from direct assay /// 0008934 // inositol monophosphate 1-phosphatase activity // inferred from electronic annotation /// 0008934 // inositol monophosphate 1-phosphatase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0052832 // inositol monophosphate 3-phosphatase activity // inferred from electronic annotation /// 0052833 // inositol monophosphate 4-phosphatase activity // inferred from electronic annotation /// 0052834 // inositol monophosphate phosphatase activity // inferred from electronic annotation","chr18:11981426-12030876 (+) // 90.6 // p11.21"]
["11739708_x_at",7.8003473,8.53896,9.178149,9.252532,9.393692,9.406102,-0.24048734,-0.109965324,-0.0058226585,0.00582242,0.027666569,0.029571295,0.38207096,0.11016206,-1.101736,-0.1397785,1.101736,"down","CACYBP",27101,"0007507 // heart development // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0060416 // response to growth hormone stimulus // inferred from electronic annotation /// 0060548 // negative regulation of cell death // inferred from electronic annotation /// 0071277 // cellular response to calcium ion // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005641 // nuclear envelope lumen // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030877 // beta-catenin destruction complex // inferred from direct assay /// 0043005 // neuron projection // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction","chr1:174968299-174981163 (+) // 81.99 // q25.1"]
["11756227_s_at",414.0244,399.4609,419.93207,360.54028,381.06583,380.05304,0.085668564,0.034007072,0.106108665,-0.11388683,-0.034007072,-0.037846565,0.14224653,0.015242654,1.0997494,0.13717487,1.0997494,"up","PEX2",5828,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0001764 // neuron migration // inferred from electronic annotation /// 0006635 // fatty acid beta-oxidation // inferred from mutant phenotype /// 0006699 // bile acid biosynthetic process // inferred from electronic annotation /// 0007031 // peroxisome organization // inferred from mutant phenotype /// 0007031 // peroxisome organization // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0016558 // protein import into peroxisome matrix // inferred from mutant phenotype /// 0031648 // protein destabilization // inferred from mutant phenotype /// 0042632 // cholesterol homeostasis // inferred from electronic annotation /// 0045540 // regulation of cholesterol biosynthetic process // inferred from electronic annotation /// 0048147 // negative regulation of fibroblast proliferation // inferred from mutant phenotype /// 0050680 // negative regulation of epithelial cell proliferation // inferred from mutant phenotype","0005624 // membrane fraction // inferred from electronic annotation /// 0005777 // peroxisome // inferred from electronic annotation /// 0005778 // peroxisomal membrane // inferred from direct assay /// 0005778 // peroxisomal membrane // inferred from electronic annotation /// 0005779 // integral to peroxisomal membrane // inferred from mutant phenotype /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016593 // Cdc73/Paf1 complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:77895084-77896020 (-) // 95.08 // q21.11"]
["11750999_a_at",110.13471,109.71797,99.113556,113.222855,104.876785,113.78558,0.002735138,-0.002734661,-0.1493802,0.042630672,-0.067839146,0.04978323,0.707801,0.40741366,-1.0410106,-0.057984784,1.0410106,"down","TBXAS1",6916,"0001516 // prostaglandin biosynthetic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006690 // icosanoid metabolic process // traceable author statement /// 0006692 // prostanoid metabolic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0030644 // cellular chloride ion homeostasis // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045907 // positive regulation of vasoconstriction // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004497 // monooxygenase activity // inferred from electronic annotation /// 0004796 // thromboxane-A synthase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:139529071-139716629 (+) // 99.94 // q34"]
["11755383_a_at",629.87744,516.053,474.77994,721.0391,542.62573,561.4634,0.19049644,-0.097055435,-0.21731567,0.38550282,-0.024617195,0.024617195,0.696536,0.39189234,-1.1248966,-0.16979246,1.1248966,"down","SEC24C",9632,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // non-traceable author statement /// 0006888 // ER to Golgi vesicle-mediated transport // traceable author statement /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0048208 // COPII vesicle coating // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0030127 // COPII vesicle coat // non-traceable author statement /// 0030127 // COPII vesicle coat // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation","chr10:75504135-75531917 (+) // 99.34 // q22.2"]
["11720205_a_at",162.76855,163.05077,160.26262,130.44489,133.32227,160.0534,0.023326874,0.025825024,0.0009422302,-0.29605532,-0.26457787,-0.0009422302,0.3553542,0.09566758,1.1517997,0.20388982,1.1517997,"up","CLDN12",9069,"0016338 // calcium-independent cell-cell adhesion // inferred from sequence or structural similarity /// 0034329 // cell junction assembly // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement /// 0070830 // tight junction assembly // traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from sequence or structural similarity","chr7:90032647-90045268 (+) // 97.33 // q21.13"]
["11751493_a_at",13.73449,17.222448,15.103126,11.000445,13.388538,14.080293,-0.017936945,0.30854988,0.11910677,-0.3381784,-0.05474186,0.017936945,0.436008,0.14365223,1.1987807,0.2615677,1.1987807,"up","PRKG1",5592,"0001764 // neuron migration // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016358 // dendrite development // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // traceable author statement /// 0030900 // forebrain development // inferred from electronic annotation /// 0043087 // regulation of GTPase activity // inferred from mutant phenotype /// 0090331 // negative regulation of platelet aggregation // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004692 // cGMP-dependent protein kinase activity // inferred from direct assay /// 0004692 // cGMP-dependent protein kinase activity // inferred from electronic annotation /// 0005246 // calcium channel regulator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0030553 // cGMP binding // inferred from electronic annotation","chr10:52834328-53822616 (+) // 97.12 // q11.23"]
["11755599_x_at",40.64774,46.280342,44.531555,51.38508,46.318798,35.882378,-0.15943861,0.027785778,-0.027785778,0.17873573,0.02898407,-0.3393383,0.9853897,0.9575245,-1.0064485,-0.009273361,1.0064485,"down","POU5F1",5460,"0001714 // endodermal cell fate specification // inferred from direct assay /// 0001824 // blastocyst development // inferred from sequence or structural similarity /// 0003130 // BMP signaling pathway involved in heart induction // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006366 // transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0009611 // response to wounding // inferred from expression pattern /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0009786 // regulation of asymmetric cell division // inferred from sequence or structural similarity /// 0010468 // regulation of gene expression // inferred from mutant phenotype /// 0035019 // somatic stem cell maintenance // inferred from direct assay /// 0035019 // somatic stem cell maintenance // inferred from mutant phenotype /// 0035413 // positive regulation of catenin import into nucleus // inferred from direct assay /// 0042789 // mRNA transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0060391 // positive regulation of SMAD protein import into nucleus // inferred from direct assay /// 0060795 // cell fate commitment involved in formation of primary germ layer // inferred from mutant phenotype /// 0060913 // cardiac cell fate determination // inferred from direct assay /// 0060965 // negative regulation of gene silencing by miRNA // inferred from mutant phenotype /// 0090081 // regulation of heart induction by regulation of canonical Wnt receptor signaling pathway // inferred from mutant phenotype /// 0090308 // regulation of methylation-dependent chromatin silencing // inferred from direct assay","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005667 // transcription factor complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay","0000981 // sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0035198 // miRNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay","chr6:31132128-31134615 (-) // 87.02 // p21.33"]
["11734524_at",14.45583,15.897788,16.195263,19.237007,15.793666,16.669653,-0.1505475,-0.013372898,0.013372898,0.26168537,-0.022852898,0.0550251,0.52229005,0.20861433,-1.108136,-0.14813502,1.108136,"down","C6orf15",29113,"0030198 // extracellular matrix organization // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005614 // interstitial matrix // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0001968 // fibronectin binding // inferred from electronic annotation /// 0005518 // collagen binding // inferred from electronic annotation /// 0005539 // glycosaminoglycan binding // inferred from electronic annotation /// 0005540 // hyaluronic acid binding // inferred from electronic annotation /// 0008201 // heparin binding // inferred from electronic annotation /// 0043236 // laminin binding // inferred from electronic annotation /// 0070052 // collagen V binding // inferred from electronic annotation","chr6:31078999-31080299 (-) // 89.22 // p21.33"]
["11721399_a_at",14.9164915,19.28973,14.383036,11.030858,17.27902,18.180637,-0.10605645,0.26486826,-0.15859652,-0.54142,0.10605669,0.17943811,0.9106004,0.7634332,1.0609673,0.08538023,1.0609673,"up","SLIT2",9353,"0001656 // metanephros development // inferred from electronic annotation /// 0001657 // ureteric bud development // inferred from mutant phenotype /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001933 // negative regulation of protein phosphorylation // inferred from direct assay /// 0002042 // cell migration involved in sprouting angiogenesis // inferred from mutant phenotype /// 0002689 // negative regulation of leukocyte chemotaxis // inferred from direct assay /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007411 // axon guidance // inferred from direct assay /// 0007411 // axon guidance // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0010593 // negative regulation of lamellipodium assembly // inferred from direct assay /// 0010596 // negative regulation of endothelial cell migration // inferred from direct assay /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0014912 // negative regulation of smooth muscle cell migration // inferred from direct assay /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0021772 // olfactory bulb development // inferred from electronic annotation /// 0021834 // chemorepulsion involved in embryonic olfactory bulb interneuron precursor migration // inferred from direct assay /// 0021836 // chemorepulsion involved in postnatal olfactory bulb interneuron migration // inferred from direct assay /// 0021972 // corticospinal neuron axon guidance through spinal cord // inferred from mutant phenotype /// 0022029 // telencephalon cell migration // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0030336 // negative regulation of cell migration // inferred from direct assay /// 0030336 // negative regulation of cell migration // inferred from mutant phenotype /// 0030837 // negative regulation of actin filament polymerization // inferred from direct assay /// 0031290 // retinal ganglion cell axon guidance // inferred from direct assay /// 0031290 // retinal ganglion cell axon guidance // inferred from electronic annotation /// 0032870 // cellular response to hormone stimulus // inferred from expression pattern /// 0033563 // dorsal/ventral axon guidance // inferred from electronic annotation /// 0035385 // Roundabout signaling pathway // inferred by curator /// 0035385 // Roundabout signaling pathway // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043116 // negative regulation of vascular permeability // inferred from direct assay /// 0048754 // branching morphogenesis of a tube // inferred from direct assay /// 0048754 // branching morphogenesis of a tube // inferred from mutant phenotype /// 0048812 // neuron projection morphogenesis // inferred from electronic annotation /// 0048846 // axon extension involved in axon guidance // inferred from direct assay /// 0050772 // positive regulation of axonogenesis // traceable author statement /// 0050919 // negative chemotaxis // inferred from direct assay /// 0050919 // negative chemotaxis // inferred from mutant phenotype /// 0050919 // negative chemotaxis // inferred from electronic annotation /// 0050929 // induction of negative chemotaxis // inferred from direct assay /// 0051058 // negative regulation of small GTPase mediated signal transduction // inferred from direct assay /// 0051414 // response to cortisol stimulus // inferred from expression pattern /// 0060603 // mammary gland duct morphogenesis // inferred from electronic annotation /// 0060763 // mammary duct terminal end bud growth // inferred from electronic annotation /// 0061364 // apoptotic process involved in luteolysis // inferred from expression pattern /// 0070100 // negative regulation of chemokine-mediated signaling pathway // inferred from mutant phenotype /// 0071504 // cellular response to heparin // inferred from direct assay /// 0071672 // negative regulation of smooth muscle cell chemotaxis // inferred from direct assay /// 0071676 // negative regulation of mononuclear cell migration // inferred from direct assay /// 0090024 // negative regulation of neutrophil chemotaxis // inferred from direct assay /// 0090027 // negative regulation of monocyte chemotaxis // inferred from sequence or structural similarity /// 0090260 // negative regulation of retinal ganglion cell axon guidance // inferred from direct assay /// 0090288 // negative regulation of cellular response to growth factor stimulus // inferred from direct assay","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // non-traceable author statement","0005095 // GTPase inhibitor activity // inferred from direct assay /// 0005509 // calcium ion binding // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from direct assay /// 0008201 // heparin binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043237 // laminin-1 binding // inferred from direct assay /// 0043394 // proteoglycan binding // inferred from physical interaction /// 0045499 // chemorepellent activity // inferred from electronic annotation /// 0048495 // Roundabout binding // inferred from physical interaction","chr4:20254882-20621341 (+) // 99.81 // p15.31"]
["11751024_a_at",71.64834,68.495964,79.419136,59.18217,76.1584,74.22289,-0.025465488,-0.09038019,0.12308788,-0.30123615,0.06260395,0.025465488,0.8337795,0.60676384,1.0522443,0.0734697,1.0522443,"up","XYLB",9942,"0005975 // carbohydrate metabolic process // traceable author statement /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0005998 // xylulose catabolic process // traceable author statement /// 0006091 // generation of precursor metabolites and energy // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0042732 // D-xylose metabolic process // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0004856 // xylulokinase activity // inferred from electronic annotation /// 0004856 // xylulokinase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation","chr3:38388345-38454767 (+) // 99.83 // p22.2"]
["11751219_x_at",314.50598,374.57538,404.38028,373.60355,467.91724,397.30884,-0.29467106,-0.042502403,0.06795406,-0.046250343,0.27849483,0.042502403,0.5980611,0.27811444,-1.1339226,-0.18132214,1.1339226,"down","GOLGA4",2803,"0000042 // protein targeting to Golgi // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // traceable author statement /// 0043001 // Golgi to plasma membrane protein transport // inferred from direct assay","0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0051020 // GTPase binding // inferred from physical interaction","chr3:37284737-37408236 (+) // 97.57 // p22.2"]
["11722242_at",142.5089,147.24258,171.78456,149.98009,148.52716,148.7739,-0.060872078,-0.013728619,0.20867634,0.01284647,-0.0011973381,0.0011973381,0.858284,0.652692,1.0284059,0.0404098,1.0284059,"up","TSPAN12",23554,"0001525 // angiogenesis // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from sequence or structural similarity /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0010842 // retina layer formation // inferred from sequence or structural similarity /// 0010842 // retina layer formation // inferred from electronic annotation /// 0045765 // regulation of angiogenesis // inferred from sequence or structural similarity /// 0045765 // regulation of angiogenesis // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from sequence or structural similarity /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0042813 // Wnt-activated receptor activity // inferred from sequence or structural similarity","chr7:120427373-120498411 (-) // 98.9 // q31.31"]
["11732671_s_at",110.89667,94.812645,90.44902,119.334755,110.54148,99.4152,0.08115244,-0.14491177,-0.21288633,0.18695164,0.076524734,-0.076524734,0.5773465,0.25773346,-1.1130608,-0.15453245,1.1130608,"down","CCDC107",203260,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr9:35658309-35661183 (+) // 97.14 // p13.3"]
["11749474_a_at",629.7346,568.3195,552.8899,524.37024,480.9507,485.43164,0.22595501,0.077913284,0.03820324,-0.03820324,-0.16289997,-0.14952087,0.19614512,0.029273856,1.1735656,0.23089851,1.1735656,"up","AACS",65985,"0001889 // liver development // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0010243 // response to organic nitrogen // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014074 // response to purine-containing compound // inferred from electronic annotation /// 0032024 // positive regulation of insulin secretion // inferred from electronic annotation /// 0034201 // response to oleic acid // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042594 // response to starvation // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation /// 0050872 // white fat cell differentiation // inferred from electronic annotation /// 0060612 // adipose tissue development // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0071394 // cellular response to testosterone stimulus // inferred from electronic annotation /// 0071397 // cellular response to cholesterol // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0030729 // acetoacetate-CoA ligase activity // inferred from electronic annotation /// 0047760 // butyrate-CoA ligase activity // inferred from electronic annotation","chr12:125589683-125627861 (+) // 93.79 // q24.31"]
["11736760_a_at",125.722885,129.69286,140.53705,137.18123,135.93651,153.15268,-0.11926079,-0.07440901,0.04144287,0.0065751076,-0.0065751076,0.16546297,0.5374016,0.22119011,-1.076163,-0.10589668,1.076163,"down","FKBP11",51303,"0000413 // protein peptidyl-prolyl isomerization // not recorded /// 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006457 // protein folding // inferred from electronic annotation /// 0018208 // peptidyl-proline modification // not recorded","0016020 // membrane // not recorded /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003755 // peptidyl-prolyl cis-trans isomerase activity // not recorded /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0005528 // FK506 binding // not recorded /// 0016853 // isomerase activity // inferred from electronic annotation","chr12:49316778-49320024 (-) // 76.77 // q13.12"]
["11748701_s_at",28.982182,32.209198,37.19908,30.283854,37.74617,41.932182,-0.25620365,-0.103897095,0.103897095,-0.19282103,0.12496042,0.2766881,0.71765304,0.4215926,-1.1134297,-0.15501043,1.1134297,"down","FUT6",2528,"0006486 // protein glycosylation // inferred from electronic annotation /// 0006486 // protein glycosylation // traceable author statement /// 0036065 // fucosylation // traceable author statement /// 0036065 // fucosylation // inferred from electronic annotation /// 0042355 // L-fucose catabolic process // non-traceable author statement","0005794 // Golgi apparatus // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0008417 // fucosyltransferase activity // traceable author statement /// 0008417 // fucosyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0017060 // 3-galactosyl-N-acetylglucosaminide 4-alpha-L-fucosyltransferase activity // inferred from electronic annotation /// 0046920 // alpha-(1->3)-fucosyltransferase activity // traceable author statement","chr19:5831388-5832578 (-) // 99.73 // p13.3"]
["11753664_x_at",68.98189,73.25705,71.87233,51.708633,52.89196,37.254276,0.19158411,0.27833462,0.25080347,-0.2242279,-0.19158459,-0.697227,0.16613849,0.020903952,1.5275863,0.6112539,1.5275863,"up","RDM1",201299,"0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015030 // Cajal body // inferred from electronic annotation /// 0016605 // PML body // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr17:34245345-34257731 (-) // 100.0 // q12"]
["11745303_at",19.447878,20.924942,21.566267,24.443787,21.664085,27.963608,-0.15242815,-0.046817303,-0.0032644272,0.17742682,0.0032644272,0.37150955,0.35355157,0.09435915,-1.1905022,-0.25157025,1.1905022,"down","PFN1P2",767846,"0007010 // cytoskeleton organization // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation","0015629 // actin cytoskeleton // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation","chr1:148349176-148350899 (+) // 38.06 // q21.2"]
["11749667_a_at",16.295078,14.421915,14.590396,13.656297,16.776405,17.088558,0.079708576,-0.09646511,-0.079708815,-0.17516112,0.12170601,0.14830303,0.83923405,0.61729026,-1.0451943,-0.063771114,1.0451943,"down","AFAP1L2",84632,"0006954 // inflammatory response // inferred from direct assay /// 0007346 // regulation of mitotic cell cycle // inferred from direct assay /// 0032675 // regulation of interleukin-6 production // inferred from direct assay /// 0032757 // positive regulation of interleukin-8 production // inferred from direct assay /// 0045742 // positive regulation of epidermal growth factor receptor signaling pathway // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0061098 // positive regulation of protein tyrosine kinase activity // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016235 // aggresome // inferred from direct assay","0005543 // phospholipid binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from physical interaction /// 0030296 // protein tyrosine kinase activator activity // inferred from direct assay /// 0042169 // SH2 domain binding // inferred from physical interaction","chr10:116055530-116164260 (-) // 99.8 // q25.3"]
["11744554_at",29.070915,31.951723,35.049244,34.42936,25.28482,28.026073,-0.06815863,0.06815863,0.20164824,0.17590427,-0.26946354,-0.12096548,0.71186125,0.41400528,1.1009312,0.13872427,1.1009312,"up","CROT",54677,"0006091 // generation of precursor metabolites and energy // inferred from direct assay /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from mutant phenotype /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006635 // fatty acid beta-oxidation // inferred from direct assay /// 0006635 // fatty acid beta-oxidation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0010243 // response to organic nitrogen // inferred from electronic annotation /// 0015908 // fatty acid transport // inferred from electronic annotation /// 0033540 // fatty acid beta-oxidation using acyl-CoA oxidase // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051791 // medium-chain fatty acid metabolic process // inferred from direct assay","0005625 // soluble fraction // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // non-traceable author statement /// 0005777 // peroxisome // inferred from electronic annotation /// 0005782 // peroxisomal matrix // traceable author statement /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005102 // receptor binding // inferred from physical interaction /// 0008458 // carnitine O-octanoyltransferase activity // inferred from direct assay /// 0008458 // carnitine O-octanoyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation","chr7:86974969-86989370 (+) // 82.66 // q21.12"]
["11738003_s_at",117.43915,134.75134,129.87706,125.38136,137.6511,134.78453,-0.17180967,0.026576519,-0.026576519,-0.07739973,0.057293415,0.02693224,0.7411876,0.4545119,-1.0421371,-0.05954515,1.0421371,"down","SLC35E2 /// SLC35E2B","728661 /// 9906","","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:1660748-1677493 (-) // 92.67 // p36.33"]
["11723847_a_at",490.2002,535.424,568.4315,432.93826,471.19873,453.36395,0.028517723,0.15582848,0.24213314,-0.15069199,-0.028517723,-0.08418369,0.206228,0.03224492,1.1728004,0.22995752,1.1728004,"up","ATP11C",286410,"0006812 // cation transport // inferred from electronic annotation /// 0015914 // phospholipid transport // inferred from electronic annotation /// 0034220 // ion transmembrane transport // traceable author statement /// 0045332 // phospholipid translocation // non-traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004012 // phospholipid-translocating ATPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:138808504-138914447 (-) // 98.96 // q27.1"]
["11722682_at",133.22722,113.80488,102.59894,173.64232,139.83092,134.005,-0.004199028,-0.2315259,-0.38107204,0.37803078,0.06559563,0.004199028,0.34528762,0.089944646,-1.278874,-0.35487416,1.278874,"down","MECP2",4204,"0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0000792 // heterochromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0010385 // double-stranded methylated DNA binding // inferred from mutant phenotype /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0047485 // protein N-terminus binding // inferred from physical interaction","chrX:153287024-153363205 (-) // 98.23 // q28"]
["11741782_s_at",11.264363,10.12146,9.352807,9.752256,10.310059,12.674534,0.14103079,-0.013317585,-0.12726355,-0.066926956,0.013317347,0.311198,0.81358325,0.570393,-1.0612121,-0.08571298,1.0612121,"down","TSPY1 /// TSPY10 /// TSPY2 /// TSPY3 /// TSPY4 /// TSPY8","100289087 /// 64591 /// 7258 /// 728137 /// 728395 /// 728403","0006334 // nucleosome assembly // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007283 // spermatogenesis // traceable author statement /// 0007506 // gonadal mesoderm development // inferred from electronic annotation /// 0007548 // sex differentiation // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chrY:6114263-6117053 (+) // 100.0 // p11.2 /// chrY:9215684-9218479 (+) // 99.57 // p11.2 /// chrY:9236029-9238825 (+) // 99.48 // p11.2 /// chrY:9304563-9307357 (+) // 99.48 // p11.2 /// chrY:9365488-9368284 (+) // 99.48 // p11.2 /// chrY:9175072-9177886 (+) // 97.24 // p11.2 /// chrY:9195405-9198201 (+) // 99.4 // p11.2 /// chrY:9324875-9327689 (+) // 97.16 // p11.2 /// chrY:9345158-9347971 (+) // 96.98 // p11.2"]
["11737806_a_at",47.913498,48.190403,55.33437,37.806377,47.355675,47.606724,0.0046334267,0.0129470825,0.21237707,-0.33716917,-0.012261391,-0.0046334267,0.5182532,0.2055701,1.1444654,0.19467391,1.1444654,"up","PIWIL2",55124,"0000966 // RNA 5'-end processing // inferred from sequence or structural similarity /// 0000966 // RNA 5'-end processing // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0007126 // meiosis // inferred from electronic annotation /// 0007128 // meiotic prophase I // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030718 // germ-line stem cell maintenance // inferred from sequence or structural similarity /// 0030718 // germ-line stem cell maintenance // inferred from electronic annotation /// 0031047 // gene silencing by RNA // inferred from sequence or structural similarity /// 0031047 // gene silencing by RNA // inferred from electronic annotation /// 0034587 // piRNA metabolic process // inferred from sequence or structural similarity /// 0034587 // piRNA metabolic process // inferred from electronic annotation /// 0043046 // DNA methylation involved in gamete generation // inferred from sequence or structural similarity /// 0043046 // DNA methylation involved in gamete generation // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from sequence or structural similarity /// 0045727 // positive regulation of translation // inferred from electronic annotation /// 0048477 // oogenesis // inferred from sequence or structural similarity /// 0048477 // oogenesis // inferred from electronic annotation","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005844 // polysome // inferred from electronic annotation /// 0033391 // chromatoid body // inferred from sequence or structural similarity /// 0033391 // chromatoid body // inferred from electronic annotation /// 0043186 // P granule // inferred from sequence or structural similarity /// 0043186 // P granule // inferred from electronic annotation /// 0071546 // pi-body // inferred from sequence or structural similarity /// 0071546 // pi-body // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from electronic annotation /// 0034584 // piRNA binding // inferred from direct assay /// 0034584 // piRNA binding // inferred from sequence or structural similarity /// 0034584 // piRNA binding // inferred from electronic annotation","chr8:22132809-22213584 (+) // 91.89 // p21.3"]
["11751067_x_at",559.5311,525.71234,533.42834,576.5911,504.50623,506.12363,0.079434395,-0.010510445,0.010510445,0.12276459,-0.06991196,-0.065294266,0.87185204,0.6802723,1.0214548,0.03062538,1.0214548,"up","AKIRIN1",79647,"","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","","chr1:39456959-39470995 (+) // 87.1 // p34.3"]
["11750179_s_at",64.939064,53.370102,55.623486,68.37206,64.8633,64.18988,0.009212971,-0.27384186,-0.21417904,0.08353329,0.007528305,-0.007527828,0.37725323,0.10746696,-1.138747,-0.18744722,1.138747,"down","ECHDC2",55268,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation","chr1:53362074-53392851 (-) // 86.17 // p32.3"]
["11750093_a_at",1975.4056,1747.1321,1679.3463,2471.2866,2369.557,1947.3953,0.01030159,-0.16685867,-0.22394753,0.33341503,0.27276993,-0.01030159,0.288474,0.06279325,-1.2530662,-0.3254626,1.2530662,"down","PRICKLE4 /// TOMM6","100188893 /// 29964","0006626 // protein targeting to mitochondrion // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement","0005634 // nucleus // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:41755449-41757379 (+) // 71.7 // p21.1"]
["11751150_a_at",155.06744,165.49126,158.91483,171.22723,165.59828,177.56386,-0.09432602,-0.00046682358,-0.05896759,0.048690796,0.00046634674,0.10111666,0.29132962,0.06407485,-1.072773,-0.1013448,1.072773,"down","SNIP1",79753,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007249 // I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0031047 // gene silencing by RNA // inferred from electronic annotation /// 0035196 // production of miRNAs involved in gene silencing by miRNA // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr1:38002927-38019890 (-) // 99.61 // p34.3"]
["11735075_at",31.396675,46.481407,46.40039,40.42531,42.682934,48.924686,-0.50328636,0.062755585,0.06023884,-0.13863945,-0.06023884,0.13666439,0.8480488,0.632786,-1.0762595,-0.106025964,1.0762595,"down","C15orf37",283687,"","","","chr15:80215112-80217268 (+) // 84.74 // q25.1"]
["11757504_a_at",574.49066,529.72925,548.8008,302.3155,246.81375,251.36533,0.5216284,0.40460014,0.45562744,-0.40460014,-0.69723225,-0.67086935,0.030254524,0.0004520263,2.0727115,1.0515193,2.0727115,"up","DDAH1",23576,"0000052 // citrulline metabolic process // inferred from direct assay /// 0003073 // regulation of systemic arterial blood pressure // inferred from sequence or structural similarity /// 0003073 // regulation of systemic arterial blood pressure // inferred from electronic annotation /// 0006525 // arginine metabolic process // inferred from electronic annotation /// 0006527 // arginine catabolic process // traceable author statement /// 0007263 // nitric oxide mediated signal transduction // traceable author statement /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from sequence or structural similarity /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation","0003824 // catalytic activity // traceable author statement /// 0016403 // dimethylargininase activity // inferred from direct assay /// 0016403 // dimethylargininase activity // inferred from electronic annotation /// 0016597 // amino acid binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016813 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:85784167-85784590 (-) // 92.34 // p22.3"]
["11723843_a_at",9.374944,8.684797,9.804253,9.240121,10.23225,10.330624,-0.032298803,-0.14261651,0.032298803,-0.053197384,0.09394288,0.10774636,0.5718697,0.2519144,-1.0695739,-0.09703614,1.0695739,"down","ADGB",79747,"0006508 // proteolysis // inferred from electronic annotation /// 0015671 // oxygen transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0004198 // calcium-dependent cysteine-type endopeptidase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0019825 // oxygen binding // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation","chr6:146920102-147136598 (+) // 97.4 // q24.3"]
["11746990_x_at",47.44896,42.756382,43.427227,38.54966,38.064075,40.681664,0.18611717,0.035880566,0.05834055,-0.113541126,-0.13182926,-0.035880566,0.19075735,0.02759851,1.138549,0.18719634,1.138549,"up","PEX14",5195,"0006461 // protein complex assembly // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0007031 // peroxisome organization // inferred from genetic interaction /// 0007031 // peroxisome organization // inferred from sequence or structural similarity /// 0007031 // peroxisome organization // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016558 // protein import into peroxisome matrix // inferred from mutant phenotype /// 0016558 // protein import into peroxisome matrix // inferred from electronic annotation /// 0016558 // protein import into peroxisome matrix // inferred from direct assay /// 0016561 // protein import into peroxisome matrix, translocation // inferred from direct assay /// 0032091 // negative regulation of protein binding // inferred from direct assay /// 0034453 // microtubule anchoring // inferred from direct assay /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from direct assay /// 0072384 // organelle transport along microtubule // inferred from direct assay","0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation /// 0005778 // peroxisomal membrane // inferred from direct assay /// 0005778 // peroxisomal membrane // inferred from sequence or structural similarity /// 0005778 // peroxisomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from sequence or structural similarity /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from sequence or structural similarity /// 0043234 // protein complex // inferred from electronic annotation","0003714 // transcription corepressor activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from direct assay /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0048487 // beta-tubulin binding // inferred from physical interaction","chr1:10535007-10690756 (+) // 89.94 // p36.22"]
["11749737_a_at",11.687083,13.910048,13.485592,10.875936,12.698963,11.440052,-0.059898138,0.1913147,0.14660597,-0.1636734,0.0598979,-0.09071946,0.50623524,0.19595444,1.1153572,0.15750577,1.1153572,"up","CPEB1",64506,"0006397 // mRNA processing // inferred from electronic annotation /// 0006412 // translation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation","0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // inferred from electronic annotation","chr15:83213044-83241961 (-) // 99.95 // q25.2"]
["11719063_a_at",147.5794,138.3212,135.11504,175.93294,181.97482,184.47528,-0.12676716,-0.2202363,-0.2540698,0.12676764,0.17548084,0.19516945,0.04180886,0.0010580235,-1.2889209,-0.3661637,1.2889209,"down","SESN1",27244,"0006974 // response to DNA damage stimulus // traceable author statement /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0007050 // cell cycle arrest // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement","","chr6:109307644-109416093 (-) // 98.19 // q21"]
["11715833_a_at",1388.3114,1239.3105,1246.034,1456.12,1248.5356,1148.8453,0.15454102,-0.009252548,-0.0014467239,0.22333908,0.0014467239,-0.11860561,0.97077656,0.91724086,1.0087396,0.012553786,1.0087396,"up","RUVBL1",8607,"0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006334 // nucleosome assembly // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0007283 // spermatogenesis // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // inferred from direct assay /// 0032508 // DNA duplex unwinding // inferred from electronic annotation /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0040008 // regulation of growth // inferred from electronic annotation /// 0043967 // histone H4 acetylation // inferred from direct assay /// 0043968 // histone H2A acetylation // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0031011 // Ino80 complex // inferred from direct assay /// 0035267 // NuA4 histone acetyltransferase complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0071339 // MLL1 complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003678 // DNA helicase activity // inferred from direct assay /// 0003678 // DNA helicase activity // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr3:127799651-127842723 (-) // 86.95 // q21.3"]
["11745617_x_at",46.683483,56.302773,52.80511,44.78964,48.728703,52.89198,-0.11981249,0.15048075,0.05795288,-0.17955971,-0.05795288,0.060324192,0.73672956,0.4474214,1.0633402,0.08860322,1.0633402,"up","TRIM15",89870,"0007500 // mesodermal cell fate determination // traceable author statement","0005622 // intracellular // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:30131461-30140462 (+) // 99.77 // p22.1"]
["11720583_s_at",136.70084,109.362366,109.89755,140.4511,105.37957,90.81676,0.31838417,-0.0035214424,0.0035214424,0.35743046,-0.0570426,-0.2716074,0.8692711,0.67383367,1.0692021,0.09653453,1.0692021,"up","TCF12",6938,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006955 // immune response // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007517 // muscle organ development // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0070888 // E-box binding // inferred from electronic annotation","chr15:57210832-57580716 (+) // 99.35 // q21.3"]
["11744174_a_at",363.39792,285.04605,264.87302,332.96255,275.63733,245.44829,0.37456703,0.024211884,-0.081682205,0.24837685,-0.024211884,-0.19156456,0.8522556,0.6409372,1.0679411,0.09483204,1.0679411,"up","UBQLN4",56893,"0032434 // regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from sequence or structural similarity /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation /// 0031595 // nuclear proteasome complex // inferred from direct assay /// 0031597 // cytosolic proteasome complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0031593 // polyubiquitin binding // inferred from direct assay","chr1:156005091-156023576 (-) // 95.57 // q22 /// chr3:148701961-148705537 (-) // 94.39 // q24"]
["11737501_at",8.237354,9.248689,7.6102567,9.485468,7.7989016,9.081646,-0.07038617,0.09668136,-0.18462229,0.1331513,-0.14929628,0.07038641,0.8201577,0.58159053,-1.0503398,-0.07085616,1.0503398,"down","TRPC5",7224,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // traceable author statement /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from direct assay /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0034704 // calcium channel complex // inferred from direct assay","0004872 // receptor activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from direct assay /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015279 // store-operated calcium channel activity // traceable author statement /// 0070679 // inositol 1,4,5 trisphosphate binding // inferred from electronic annotation","chrX:111017541-111326004 (-) // 97.95 // q23"]
["11724494_x_at",668.3891,529.38934,469.9768,679.36804,385.14227,480.18607,0.40672684,0.07036781,-0.101371765,0.43023205,-0.38856983,-0.07036781,0.8604269,0.6566558,1.0979478,0.13480951,1.0979478,"up","SF3B4",10262,"0000375 // RNA splicing, via transesterification reactions // traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005681 // spliceosomal complex // traceable author statement /// 0005689 // U12-type spliceosomal complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:149895209-149900522 (-) // 98.88 // q21.2"]
["11746787_a_at",30.761301,32.20197,38.24743,32.44547,33.077934,33.24453,-0.09082651,-0.024794102,0.22341967,-0.013926029,0.013926029,0.021173954,0.916607,0.77913916,1.0202162,0.028874952,1.0202162,"up","USP37",57695,"0000082 // G1/S transition of mitotic cell cycle // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0035871 // protein K11-linked deubiquitination // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation /// 0071108 // protein K48-linked deubiquitination // inferred from direct assay","0005634 // nucleus // inferred from direct assay","0004197 // cysteine-type endopeptidase activity // inferred from direct assay /// 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction","chr2:219392994-219433053 (-) // 73.52 // q35"]
["11762309_a_at",27.554499,24.398237,27.106289,23.546976,23.751312,27.944897,0.09958553,-0.07592535,0.07592535,-0.12716055,-0.11469507,0.11988258,0.76497096,0.49037433,1.0525239,0.07385293,1.0525239,"up","ZNF589",51385,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:48282595-48328120 (+) // 96.07 // p21.31"]
["11745742_s_at",72.99269,81.774574,70.33846,73.02406,72.1706,85.351364,-0.00030946732,0.16359043,-0.05374813,0.00030994415,-0.016650677,0.22535229,0.9097844,0.7609016,-1.0232507,-0.03315965,1.0232507,"down","FGD3",89846,"0006915 // apoptotic process // traceable author statement /// 0007010 // cytoskeleton organization // inferred from sequence or structural similarity /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0008360 // regulation of cell shape // inferred from sequence or structural similarity /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0030036 // actin cytoskeleton organization // inferred from sequence or structural similarity /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0043088 // regulation of Cdc42 GTPase activity // inferred from sequence or structural similarity /// 0046847 // filopodium assembly // inferred from sequence or structural similarity /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0001726 // ruffle // inferred from sequence or structural similarity /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from sequence or structural similarity","0005085 // guanyl-nucleotide exchange factor activity // inferred from sequence or structural similarity /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0031267 // small GTPase binding // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:95726242-95798307 (+) // 95.84 // q22.31"]
["11740707_a_at",1128.0901,957.2519,963.0237,1183.1145,952.2339,938.713,0.23257542,-0.004336357,0.004336357,0.30128288,-0.011919022,-0.03255081,0.9845536,0.9544655,-1.0056158,-0.008079266,1.0056158,"down","PPP6C",5537,"0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0006470 // protein dephosphorylation // inferred from direct assay /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006470 // protein dephosphorylation // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // inferred from direct assay /// 0004722 // protein serine/threonine phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:127908852-127952218 (-) // 96.37 // q33.3"]
["11755838_a_at",68.27606,69.722885,76.28421,85.27436,93.91199,87.03625,-0.24036837,-0.21011591,-0.08036375,0.08036375,0.2195611,0.10986853,0.10743776,0.008417535,-1.2427595,-0.31354707,1.2427595,"down","PCDHB13",56123,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007416 // synapse assembly // traceable author statement /// 0016339 // calcium-dependent cell-cell adhesion // non-traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr5:140593508-140596591 (+) // 99.83 // q31.3"]
["11748745_a_at",156.8323,107.99429,78.19251,163.93709,104.01958,98.82805,0.56531763,0.027050018,-0.43880272,0.6292367,-0.027050495,-0.10091257,0.91367924,0.7706403,-1.083653,-0.115902826,1.083653,"down","SF1",7536,"0000245 // spliceosomal complex assembly // non-traceable author statement /// 0000389 // nuclear mRNA 3'-splice site recognition // traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0022402 // cell cycle process // inferred from electronic annotation /// 0030238 // male sex determination // inferred from electronic annotation /// 0033327 // Leydig cell differentiation // inferred from electronic annotation /// 0048662 // negative regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050810 // regulation of steroid biosynthetic process // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005840 // ribosome // non-traceable author statement","0003676 // nucleic acid binding // non-traceable author statement /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // traceable author statement /// 0003723 // RNA binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:64533123-64545233 (-) // 98.75 // q13.1"]
["11716951_at",1466.6361,1506.4979,1436.8951,1144.0452,1177.7593,1209.5553,0.15379524,0.19248295,0.12423897,-0.20457172,-0.16267109,-0.12423897,0.030541899,0.00046113713,1.2489072,0.32066628,1.2489072,"up","NANS",54187,"0009103 // lipopolysaccharide biosynthetic process // non-traceable author statement /// 0016051 // carbohydrate biosynthetic process // inferred from electronic annotation","0005737 // cytoplasm // non-traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0008781 // N-acylneuraminate cytidylyltransferase activity // non-traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0047444 // N-acylneuraminate-9-phosphate synthase activity // inferred from electronic annotation /// 0050462 // N-acetylneuraminate synthase activity // inferred from electronic annotation","chr9:100818680-100845359 (+) // 80.57 // q22.33"]
["11751009_s_at",406.1022,317.96732,352.83984,463.8898,406.2998,363.4025,0.08013725,-0.27282715,-0.12269211,0.2720766,0.08083916,-0.08013725,0.5652823,0.2458248,-1.1455604,-0.1960535,1.1455604,"down","IK",3550,"0006955 // immune response // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement","0005615 // extracellular space // traceable author statement /// 0005625 // soluble fraction // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","","chr5:140027425-140042063 (+) // 92.11 // q31.3"]
["11726504_at",196.32379,198.10313,191.09485,198.18369,192.90036,189.27269,0.01268959,0.025706291,-0.026256561,0.026292324,-0.01268959,-0.040079117,0.8470902,0.63099444,1.008962,0.01287189,1.008962,"up","PGBD3",267004,"","","","chr10:50723150-50741024 (-) // 93.44 // q11.23"]
["11723563_at",2299.958,2277.9126,2412.7673,2605.6685,2356.0432,2582.5054,-0.051919937,-0.06581497,0.01716137,0.12812614,-0.01716137,0.11524391,0.3800946,0.10927671,-1.0784261,-0.10892735,1.0784261,"down","VWA5A",4013,"","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay","","chr11:123986110-123995543 (+) // 82.14 // q24.2"]
["11733230_a_at",23.546446,28.17029,24.100122,25.944162,25.542664,26.257998,-0.12865019,0.1300149,-0.095119,0.011250496,-0.011250496,0.028597355,0.8546636,0.6451364,-1.0286726,-0.04078385,1.0286726,"down","PTPRB",5787,"0001525 // angiogenesis // inferred from electronic annotation /// 0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006796 // phosphate-containing compound metabolic process // traceable author statement /// 0016311 // dephosphorylation // inferred from direct assay /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0005001 // transmembrane receptor protein tyrosine phosphatase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr12:70910629-71031220 (-) // 96.36 // q15"]
["11742030_s_at",33.89501,36.243652,41.10857,37.55483,41.569233,42.349262,-0.21314621,-0.116490364,0.065220356,-0.065220356,0.0812974,0.10811806,0.57558924,0.25584176,-1.0939426,-0.12953709,1.0939426,"down","ZMIZ2",83637,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0043596 // nuclear replication fork // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:44795786-44809477 (+) // 96.73 // p13"]
["11719960_a_at",1271.1732,894.9907,822.9505,1340.0969,966.9793,971.69025,0.39109802,-0.11511803,-0.23618507,0.46727467,-0.0035057068,0.0035057068,0.8282831,0.5954042,-1.103811,-0.1424932,1.103811,"down","CTBP1",1487,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0019079 // viral genome replication // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0031065 // positive regulation of histone deacetylation // inferred from mutant phenotype /// 0034401 // regulation of transcription by chromatin organization // inferred from mutant phenotype /// 0035067 // negative regulation of histone acetylation // inferred from mutant phenotype /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0050872 // white fat cell differentiation // inferred from sequence or structural similarity /// 0050872 // white fat cell differentiation // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0090241 // negative regulation of histone H4 acetylation // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from direct assay /// 0017053 // transcriptional repressor complex // inferred from sequence or structural similarity /// 0017053 // transcriptional repressor complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0001106 // RNA polymerase II transcription corepressor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // traceable author statement /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0048037 // cofactor binding // inferred from electronic annotation /// 0051287 // NAD binding // inferred from sequence or structural similarity /// 0051287 // NAD binding // inferred from electronic annotation","chr4:1205232-1242909 (-) // 88.65 // p16.3"]
["11734901_a_at",25.72335,34.739098,37.830463,27.600264,35.29929,38.397663,-0.44502115,-0.011539459,0.111448765,-0.34341764,0.011539459,0.13291883,0.94098663,0.8364291,-1.034345,-0.04871751,1.034345,"down","CYP4V2",285440,"0007601 // visual perception // inferred from electronic annotation /// 0010430 // fatty acid omega-oxidation // inferred from direct assay /// 0050896 // response to stimulus // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004497 // monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr4:187112470-187134612 (+) // 83.43 // q35.2"]
["11760518_at",21.84064,16.27243,19.894802,20.552776,19.894802,21.606165,0.11115265,-0.3134327,-0.023470879,0.023470879,-0.023470879,0.09558058,0.74208546,0.45616996,-1.0770689,-0.107110575,1.0770689,"down","SEC11C",90701,"0006112 // energy reserve metabolic process // traceable author statement /// 0006412 // translation // traceable author statement /// 0006465 // signal peptide processing // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr18:56807097-56824178 (+) // 77.11 // q21.32"]
["11723730_at",142.41614,152.8545,148.73029,163.68776,161.36897,175.2004,-0.14114904,-0.039102077,-0.07856321,0.059684753,0.039102077,0.15774441,0.17016181,0.02188902,-1.1264489,-0.17178182,1.1264489,"down","KREMEN1",83999,"0007154 // cell communication // traceable author statement /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0060828 // regulation of canonical Wnt receptor signaling pathway // non-traceable author statement","0005624 // membrane fraction // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr22:29469065-29542807 (+) // 88.98 // q12.1"]
["11756940_a_at",143.47824,143.17581,153.07352,114.96826,132.27002,128.44278,0.06019497,0.05715084,0.15358782,-0.25940084,-0.05715084,-0.09951067,0.19766785,0.029729333,1.1720212,0.2289986,1.1720212,"up","ZSCAN21",7589,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:99647421-99662660 (+) // 95.85 // q22.1"]
["11727349_at",42.573486,50.5057,52.32835,51.228188,60.705273,54.28877,-0.28231,-0.035819054,0.015327454,-0.015327454,0.22955656,0.06838846,0.47164983,0.16965835,-1.144835,-0.19513968,1.144835,"down","TBC1D21",161514,"0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation","chr15:74165950-74181553 (+) // 95.92 // q24.1"]
["11721525_s_at",83.39565,95.11798,87.97926,68.222916,79.88957,73.49463,0.030982494,0.2207284,0.10817385,-0.25873327,-0.030982494,-0.15135098,0.21682474,0.035817396,1.2032895,0.26698378,1.2032895,"up","BOLA2 /// BOLA2B /// LOC440354","440354 /// 552900 /// 654483","0016310 // phosphorylation // inferred from electronic annotation","","0016301 // kinase activity // inferred from electronic annotation","chr16:30204252-30205682 (-) // 87.78 // p11.2 /// chr16:29464910-29466340 (-) // 87.78 // p11.2"]
["11732394_at",48.09178,69.05619,77.38953,47.71059,70.172455,76.73479,-0.5335474,-0.011567116,0.15280104,-0.5450282,0.011567116,0.1405425,0.99977064,0.9994873,1.0001398,0.00020172154,1.0001398,"up","CLDN22 /// WWC2","53842 /// 80014","0016338 // calcium-independent cell-cell adhesion // inferred from sequence or structural similarity /// 0034329 // cell junction assembly // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement /// 0070830 // tight junction assembly // traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from sequence or structural similarity","chr4:184020445-184241927 (+) // 98.19 // q35.1"]
["11732252_x_at",100.152145,101.82726,111.78498,108.615005,124.82448,111.598335,-0.13657618,-0.1126461,0.021956444,-0.019546032,0.18113136,0.019546032,0.45727625,0.15908068,-1.098955,-0.13613236,1.098955,"down","RCOR3",55758,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:211432622-211489723 (+) // 97.13 // q32.2"]
["11717049_s_at",184.78033,218.40631,213.29922,173.82072,217.80884,216.65788,-0.21833754,0.02286625,-0.011269569,-0.30654907,0.018913746,0.011270046,0.9530683,0.8680575,1.0162168,0.023208156,1.0162168,"up","DES /// FAM48A","1674 /// 55578","0006914 // autophagy // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0007010 // cytoskeleton organization // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007369 // gastrulation // inferred from electronic annotation /// 0008016 // regulation of heart contraction // traceable author statement /// 0030049 // muscle filament sliding // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005626 // insoluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005882 // intermediate filament // traceable author statement /// 0005882 // intermediate filament // inferred from electronic annotation /// 0005916 // fascia adherens // inferred from electronic annotation /// 0030018 // Z disc // inferred from direct assay /// 0030018 // Z disc // inferred from electronic annotation /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation /// 0043292 // contractile fiber // inferred from electronic annotation /// 0045098 // type III intermediate filament // inferred from electronic annotation /// 0070461 // SAGA-type complex // inferred from direct assay","0005198 // structural molecule activity // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from physical interaction","chr2:220283098-220291456 (+) // 83.37 // q35"]
["11745377_x_at",629.5769,503.57098,488.95294,501.40396,402.14294,382.23996,0.34654808,0.024360657,-0.018138885,0.018138885,-0.30012608,-0.37335587,0.3876326,0.113601975,1.262285,0.33603767,1.262285,"up","PTRF",284119,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006353 // transcription termination, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006360 // transcription from RNA polymerase I promoter // traceable author statement /// 0006361 // transcription initiation from RNA polymerase I promoter // inferred from direct assay /// 0006361 // transcription initiation from RNA polymerase I promoter // inferred from electronic annotation /// 0006363 // termination of RNA polymerase I transcription // inferred from direct assay /// 0006363 // termination of RNA polymerase I transcription // traceable author statement /// 0006363 // termination of RNA polymerase I transcription // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005901 // caveola // inferred from direct assay /// 0005901 // caveola // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019843 // rRNA binding // inferred from electronic annotation /// 0042134 // rRNA primary transcript binding // inferred from direct assay /// 0042134 // rRNA primary transcript binding // inferred from electronic annotation","chr17:40555653-40575189 (-) // 80.98 // q21.2"]
["11716065_at",624.0326,621.4392,643.32495,652.2229,692.73193,659.3286,-0.053834915,-0.059843063,-0.009908676,0.009908676,0.09684086,0.025541306,0.26080337,0.05149609,-1.0609028,-0.085292526,1.0609028,"down","SLC37A4",2542,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // non-traceable author statement /// 0006810 // transport // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0015758 // glucose transport // traceable author statement /// 0015760 // glucose-6-phosphate transport // inferred from direct assay /// 0015760 // glucose-6-phosphate transport // inferred from mutant phenotype /// 0042593 // glucose homeostasis // inferred from direct assay /// 0044281 // small molecule metabolic process // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005783 // endoplasmic reticulum // non-traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // inferred from direct assay","0005215 // transporter activity // non-traceable author statement /// 0005215 // transporter activity // inferred from electronic annotation /// 0015152 // glucose-6-phosphate transmembrane transporter activity // inferred from direct assay /// 0015152 // glucose-6-phosphate transmembrane transporter activity // inferred from mutant phenotype","chr11:118895063-118901622 (-) // 94.39 // q23.3"]
["11746533_a_at",39.906704,27.87245,25.842901,29.844006,22.341736,24.115294,0.57232714,0.054535866,-0.054535866,0.1531372,-0.2645626,-0.15435553,0.6117908,0.29171997,1.2136643,0.2793694,1.2136643,"up","KIAA1217",56243,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0048706 // embryonic skeletal system development // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation","","chr10:24738361-24834197 (+) // 97.67 // p12.1"]
["11724631_at",10.482699,13.533346,13.899525,11.018587,15.476387,17.30689,-0.38776684,-0.0192585,0.01925826,-0.31583786,0.17429161,0.33556938,0.74191433,0.45549887,-1.1438755,-0.19393001,1.1438755,"down","SYT13",57586,"0016192 // vesicle-mediated transport // inferred from electronic annotation","0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from direct assay","","chr11:45261728-45307884 (-) // 85.81 // p11.2"]
["11755124_a_at",657.07874,603.44147,592.3739,423.75876,374.92072,381.83893,0.39119053,0.2683382,0.24163246,-0.24163246,-0.41829014,-0.3919115,0.037384983,0.00081791054,1.5702546,0.6509985,1.5702546,"up","SLCO3A1",28232,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0043252 // sodium-independent organic anion transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation","chr15:92397564-92715666 (+) // 99.87 // q26.1"]
["11724692_a_at",78.05623,82.77648,71.38955,76.32976,77.39983,88.37136,0.0060915947,0.090798855,-0.12270975,-0.026176453,-0.0060915947,0.18515682,0.8027534,0.5509004,-1.0421547,-0.059569407,1.0421547,"down","CAPN13",92291,"0006508 // proteolysis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0004198 // calcium-dependent cysteine-type endopeptidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr2:30945636-31030324 (-) // 99.19 // p23.1"]
["11741586_a_at",91.42346,102.12251,91.35405,88.07313,75.32993,95.55965,0.0005478859,0.16021204,-0.00054740906,-0.053314686,-0.27879333,0.06438494,0.5987051,0.27891088,1.1039274,0.14264525,1.1039274,"up","ERLIN2",11160,"0008219 // cell death // inferred from electronic annotation /// 0030433 // ER-associated protein catabolic process // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr8:37594096-37604070 (+) // 94.28 // p11.23"]
["11750136_a_at",35.45438,35.524445,34.62552,32.980217,32.845684,38.80347,0.017064095,0.019912243,-0.017064095,-0.08729887,-0.093195915,0.14728594,0.94088227,0.8358344,1.0123492,0.017707087,1.0123492,"up","ARHGAP36",158763,"0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0005096 // GTPase activator activity // inferred from electronic annotation","chrX:130192237-130223228 (+) // 99.91 // q26.1"]
["11732442_s_at",329.05142,243.90521,270.54617,378.72284,260.88968,236.04207,0.30865574,-0.12333727,0.02621746,0.5114851,-0.02621746,-0.17061329,0.962677,0.8944055,-1.0241115,-0.03437281,1.0241115,"down","BPTF /// LOC146880","146880 /// 2186","0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006606 // protein import into nucleus // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007420 // brain development // inferred from mutant phenotype /// 0016568 // chromatin modification // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0016589 // NURF complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008094 // DNA-dependent ATPase activity // inferred from direct assay /// 0008134 // transcription factor binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008565 // protein transporter activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from mutant phenotype /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:65821638-65980494 (+) // 95.57 // q24.2"]
["11760577_at",17.805948,16.68051,16.733273,17.682787,19.593012,18.978172,0.00500679,-0.08918905,-0.08463287,-0.00500679,0.14298677,0.09698868,0.29408133,0.06535935,-1.0977843,-0.13459459,1.0977843,"down","ZNF610",162963,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:52839564-52871030 (+) // 77.78 // q13.41"]
["11741904_at",25.097824,31.304785,30.247742,31.170668,32.332615,31.92911,-0.3157239,0.0030970573,-0.04645872,-0.0030970573,0.049704075,0.03158617,0.53545755,0.21965738,-1.106313,-0.1457596,1.106313,"down","FOLR4",390243,"","0005576 // extracellular region // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005542 // folic acid binding // inferred from electronic annotation","chr11:94038824-94040858 (+) // 85.2 // q21"]
["11749977_a_at",21.107384,24.256138,22.66201,32.288574,27.422287,26.330486,-0.25979424,-0.05919218,-0.15726614,0.35348177,0.11780691,0.05919218,0.21423388,0.03494194,-1.2618827,-0.33557776,1.2618827,"down","RNF6",6049,"0006355 // regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from mutant phenotype /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030517 // negative regulation of axon extension // inferred from sequence or structural similarity /// 0030517 // negative regulation of axon extension // inferred from electronic annotation /// 0044314 // protein K27-linked ubiquitination // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0060765 // regulation of androgen receptor signaling pathway // inferred from mutant phenotype /// 0070936 // protein K48-linked ubiquitination // inferred from sequence or structural similarity /// 0070936 // protein K48-linked ubiquitination // inferred from electronic annotation /// 0085020 // protein K6-linked ubiquitination // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016605 // PML body // inferred from electronic annotation /// 0030424 // axon // inferred from sequence or structural similarity /// 0030424 // axon // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from mutant phenotype /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0050681 // androgen receptor binding // inferred from physical interaction","chr13:26706252-26796398 (-) // 97.86 // q12.13"]
["11753355_a_at",576.1941,485.82712,516.1444,543.60297,457.737,458.60623,0.20244598,-0.043665886,0.043665886,0.11844444,-0.12959003,-0.12685299,0.6698181,0.3578601,1.0818357,0.11348147,1.0818357,"up","VPS45",11311,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // non-traceable author statement /// 0006904 // vesicle docking involved in exocytosis // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0000299 // integral to membrane of membrane fraction // inferred from sequence or structural similarity /// 0000299 // integral to membrane of membrane fraction // inferred from electronic annotation /// 0005622 // intracellular // non-traceable author statement /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","","chr1:150039399-150054008 (+) // 99.9 // q21.2"]
["11739274_s_at",100.160324,85.88266,80.52174,93.20368,84.30166,82.28156,0.23527479,0.013402939,-0.07958555,0.131423,-0.013402939,-0.04839468,0.91494304,0.7749838,1.0232478,0.033155616,1.0232478,"up","LOC646214 /// PAK2","5062 /// 646214","0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006469 // negative regulation of protein kinase activity // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016032 // viral reproduction // traceable author statement /// 0016310 // phosphorylation // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0031295 // T cell costimulation // traceable author statement /// 0040008 // regulation of growth // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0050690 // regulation of defense response to virus by virus // traceable author statement /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0061098 // positive regulation of protein tyrosine kinase activity // inferred from direct assay /// 2001238 // positive regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype /// 2001271 // negative regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0030296 // protein tyrosine kinase activator activity // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction","chr3:196466727-196559516 (+) // 93.28 // q29"]
["11726686_a_at",209.39339,189.12906,193.22151,186.54253,196.81308,226.86755,0.10267544,-0.044169903,-0.01328516,-0.06403637,0.013284683,0.2183094,0.8771266,0.6909467,-1.0286692,-0.040779166,1.0286692,"down","IRF5",3663,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0009615 // response to virus // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000975 // regulatory region DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr7:128577990-128590089 (+) // 90.34 // q32.1"]
["11751128_x_at",299.28143,293.0625,296.7033,401.14545,394.5216,436.80032,-0.19930077,-0.22959518,-0.21178246,0.22332191,0.19930077,0.34617043,0.032030836,0.00053221104,-1.3849404,-0.46982387,1.3849404,"down","SHISA5",51246,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype","0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from mutant phenotype /// 0050699 // WW domain binding // inferred from physical interaction","chr3:48509713-48520968 (-) // 91.12 // p21.31"]
["11746405_at",46.605797,50.849186,51.004955,49.764248,51.315376,60.03939,-0.12792158,-0.0022063255,0.0022063255,-0.03332138,0.010960102,0.23747826,0.6111481,0.29109186,-1.0824844,-0.114346184,1.0824844,"down","C14orf162",56936,"","","","chr14:70036530-70038088 (-) // 80.5 // q24.1"]
["11724552_s_at",2445.8896,2583.2651,2620.0562,2296.11,2466.7869,2611.654,-0.045555115,0.033281326,0.05368328,-0.13672256,-0.033281326,0.049049377,0.7237233,0.42975053,1.0382266,0.05412136,1.0382266,"up","HPCAL1",3241,"","","0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement","chr2:10443009-10567730 (+) // 92.6 // p25.1"]
["11750572_a_at",136.30452,141.47066,146.32507,137.02083,124.572525,126.137146,-0.0037813187,0.049887657,0.09856224,0.0037808418,-0.13362885,-0.11562157,0.29880083,0.06764543,1.0943286,0.13004607,1.0943286,"up","NPAT",4863,"0000083 // regulation of transcription involved in G1/S phase of mitotic cell cycle // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0015030 // Cajal body // inferred from direct assay /// 0015030 // Cajal body // inferred from electronic annotation /// 0044428 // nuclear part // inferred from direct assay","0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0003714 // transcription corepressor activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0047485 // protein N-terminus binding // inferred from physical interaction","chr11:108032304-108093343 (-) // 87.81 // q22.3"]
["11763260_at",67.29617,87.05604,92.30406,64.226166,89.54926,98.43409,-0.39178848,-0.020368576,0.064080715,-0.45915222,0.020368576,0.1568451,0.9752763,0.92930263,-1.0153984,-0.022045868,1.0153984,"down","PIGP",51227,"0006501 // C-terminal protein lipidation // traceable author statement /// 0006506 // GPI anchor biosynthetic process // inferred from electronic annotation /// 0016254 // preassembly of GPI anchor in ER membrane // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0000506 // glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0017176 // phosphatidylinositol N-acetylglucosaminyltransferase activity // inferred from direct assay /// 0017176 // phosphatidylinositol N-acetylglucosaminyltransferase activity // inferred from electronic annotation","chr21:38437850-38444871 (-) // 88.82 // q22.13"]
["11718266_s_at",268.0426,203.94781,212.7449,218.78279,212.46579,204.41684,0.33428478,-0.05997801,0.00094652176,0.04132223,-0.0009469986,-0.056663513,0.76020384,0.48285526,1.0696809,0.09718052,1.0696809,"up","SMAD3",4088,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001501 // skeletal system development // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001657 // ureteric bud development // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from mutant phenotype /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001707 // mesoderm formation // inferred from electronic annotation /// 0001756 // somitogenesis // inferred from electronic annotation /// 0001836 // release of cytochrome c from mitochondria // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0001933 // negative regulation of protein phosphorylation // inferred from mutant phenotype /// 0001947 // heart looping // inferred from electronic annotation /// 0002076 // osteoblast development // inferred from electronic annotation /// 0002520 // immune system development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006810 // transport // inferred from direct assay /// 0006917 // induction of apoptosis // inferred from mutant phenotype /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from mutant phenotype /// 0006955 // immune response // inferred from mutant phenotype /// 0007050 // cell cycle arrest // inferred from mutant phenotype /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007179 // transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0007183 // SMAD protein complex assembly // inferred from direct assay /// 0007369 // gastrulation // inferred from electronic annotation /// 0007492 // endoderm development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008633 // activation of pro-apoptotic gene products // inferred from electronic annotation /// 0008637 // apoptotic mitochondrial changes // inferred from electronic annotation /// 0009880 // embryonic pattern specification // inferred from electronic annotation /// 0010694 // positive regulation of alkaline phosphatase activity // inferred from electronic annotation /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from mutant phenotype /// 0016202 // regulation of striated muscle tissue development // inferred from electronic annotation /// 0017015 // regulation of transforming growth factor beta receptor signaling pathway // inferred from mutant phenotype /// 0017015 // regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0019049 // evasion of host defenses by virus // inferred from direct assay /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0030501 // positive regulation of bone mineralization // inferred from electronic annotation /// 0030878 // thyroid gland development // inferred from electronic annotation /// 0031053 // primary miRNA processing // traceable author statement /// 0032332 // positive regulation of chondrocyte differentiation // inferred from electronic annotation /// 0032731 // positive regulation of interleukin-1 beta production // inferred from electronic annotation /// 0032909 // regulation of transforming growth factor beta2 production // inferred from mutant phenotype /// 0032916 // positive regulation of transforming growth factor beta3 production // inferred from electronic annotation /// 0032924 // activin receptor signaling pathway // inferred from mutant phenotype /// 0033689 // negative regulation of osteoblast proliferation // inferred from electronic annotation /// 0035413 // positive regulation of catenin import into nucleus // inferred from mutant phenotype /// 0038092 // nodal signaling pathway // inferred from mutant phenotype /// 0042060 // wound healing // traceable author statement /// 0042110 // T cell activation // inferred from electronic annotation /// 0042177 // negative regulation of protein catabolic process // inferred from mutant phenotype /// 0042993 // positive regulation of transcription factor import into nucleus // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045216 // cell-cell junction organization // inferred from mutant phenotype /// 0045668 // negative regulation of osteoblast differentiation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045930 // negative regulation of mitotic cell cycle // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048340 // paraxial mesoderm morphogenesis // inferred from electronic annotation /// 0048589 // developmental growth // inferred from electronic annotation /// 0048617 // embryonic foregut morphogenesis // inferred from electronic annotation /// 0048701 // embryonic cranial skeleton morphogenesis // inferred from electronic annotation /// 0050678 // regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050728 // negative regulation of inflammatory response // inferred from electronic annotation /// 0050776 // regulation of immune response // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from mutant phenotype /// 0050927 // positive regulation of positive chemotaxis // inferred from electronic annotation /// 0051098 // regulation of binding // inferred from electronic annotation /// 0051496 // positive regulation of stress fiber assembly // inferred from electronic annotation /// 0051894 // positive regulation of focal adhesion assembly // inferred from electronic annotation /// 0060039 // pericardium development // inferred from electronic annotation /// 0060290 // transdifferentiation // inferred from electronic annotation /// 0061045 // negative regulation of wound healing // inferred from electronic annotation /// 0070306 // lens fiber cell differentiation // inferred from electronic annotation /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005637 // nuclear inner membrane // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0043235 // receptor complex // inferred from mutant phenotype /// 0071141 // SMAD protein complex // inferred from direct assay","0000987 // core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0000988 // protein binding transcription factor activity // inferred from direct assay /// 0001102 // RNA polymerase II activating transcription factor binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005160 // transforming growth factor beta receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from electronic annotation /// 0008013 // beta-catenin binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0019901 // protein kinase binding // inferred from physical interaction /// 0019902 // phosphatase binding // inferred from physical interaction /// 0030618 // transforming growth factor beta receptor, pathway-specific cytoplasmic mediator activity // inferred from direct assay /// 0031490 // chromatin DNA binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0043130 // ubiquitin binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046332 // SMAD binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070410 // co-SMAD binding // inferred from physical interaction /// 0070412 // R-SMAD binding // inferred from physical interaction","chr15:67357955-67487510 (+) // 95.19 // q22.33"]
["11728066_at",13.38928,13.225757,12.836249,12.889273,13.393936,11.980277,0.036318064,0.018589735,-0.024537086,-0.018589735,0.036819458,-0.124099016,0.7166459,0.41967428,1.0319788,0.045413397,1.0319788,"up","PTGDR2",11251,"0006935 // chemotaxis // inferred from direct assay /// 0006935 // chemotaxis // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0019722 // calcium-mediated signaling // inferred from direct assay /// 0019722 // calcium-mediated signaling // inferred from electronic annotation /// 0045745 // positive regulation of G-protein coupled receptor protein signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0001785 // prostaglandin J receptor activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from direct assay /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004956 // prostaglandin D receptor activity // inferred from direct assay /// 0004956 // prostaglandin D receptor activity // inferred from electronic annotation /// 0004958 // prostaglandin F receptor activity // inferred from electronic annotation /// 0004982 // N-formyl peptide receptor activity // inferred from electronic annotation","chr11:60618396-60623444 (-) // 81.26 // q12.2"]
["11757321_a_at",1182.5985,980.2488,907.35986,1157.0688,933.325,968.95264,0.27910137,0.008360863,-0.10311222,0.24761581,-0.062407494,-0.008360863,0.99521893,0.98736113,1.001735,0.0025008665,1.001735,"up","TAPBP",6892,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006461 // protein complex assembly // traceable author statement /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // non-traceable author statement /// 0006955 // immune response // traceable author statement /// 0019885 // antigen processing and presentation of endogenous peptide antigen via MHC class I // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0050823 // peptide antigen stabilization // inferred from sequence or structural similarity","0000139 // Golgi membrane // inferred from direct assay /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0042824 // MHC class I peptide loading complex // non-traceable author statement /// 0042825 // TAP complex // inferred from direct assay /// 0071556 // integral to lumenal side of endoplasmic reticulum membrane // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0015433 // peptide antigen-transporting ATPase activity // traceable author statement /// 0042288 // MHC class I protein binding // traceable author statement /// 0042605 // peptide antigen binding // traceable author statement /// 0046978 // TAP1 binding // inferred from physical interaction /// 0046978 // TAP1 binding // traceable author statement /// 0046979 // TAP2 binding // inferred from physical interaction /// 0046979 // TAP2 binding // traceable author statement /// 0051082 // unfolded protein binding // traceable author statement","chr6:33267470-33267918 (-) // 41.03 // p21.32"]
["11725464_a_at",292.59213,283.4911,266.56384,271.30353,208.72472,270.93542,0.10996246,0.06437492,-0.024447441,0.0009794235,-0.37732697,-0.0009794235,0.57327724,0.25334448,1.1295428,0.17573898,1.1295428,"up","SLC4A2",6522,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006820 // anion transport // traceable author statement /// 0006820 // anion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from electronic annotation /// 0015701 // bicarbonate transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0005452 // inorganic anion exchanger activity // inferred from electronic annotation /// 0008509 // anion transmembrane transporter activity // traceable author statement /// 0008509 // anion transmembrane transporter activity // inferred from electronic annotation /// 0015108 // chloride transmembrane transporter activity // inferred from electronic annotation /// 0015297 // antiporter activity // inferred from electronic annotation /// 0015301 // anion:anion antiporter activity // inferred from electronic annotation","chr7:150756667-150773614 (+) // 97.5 // q36.1"]
["11730323_at",66.23555,67.26004,70.42565,72.705826,84.58693,71.296196,-0.09735727,-0.07521343,-0.008862019,0.037107468,0.2554717,0.008862019,0.4022928,0.12226378,-1.1180292,-0.16095792,1.1180292,"down","RPS29",6235,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // inferred by curator /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0015935 // small ribosomal subunit // inferred from direct assay /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from direct assay /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:50043494-50053094 (-) // 50.7 // q21.3"]
["11715339_at",11.587372,10.660599,11.000756,10.716688,11.288153,11.71291,0.05634737,-0.06391764,-0.018603325,-0.05634713,0.018603325,0.07189345,0.8879806,0.7141278,-1.0140352,-0.020107768,1.0140352,"down","TTN",7273,"0002576 // platelet degranulation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006936 // muscle contraction // non-traceable author statement /// 0006936 // muscle contraction // traceable author statement /// 0006941 // striated muscle contraction // traceable author statement /// 0007076 // mitotic chromosome condensation // inferred from expression pattern /// 0007596 // blood coagulation // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030049 // muscle filament sliding // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0030240 // skeletal muscle thin filament assembly // inferred from mutant phenotype /// 0030241 // skeletal muscle myosin thick filament assembly // inferred from mutant phenotype /// 0045214 // sarcomere organization // inferred from mutant phenotype /// 0045859 // regulation of protein kinase activity // inferred from mutant phenotype /// 0048739 // cardiac muscle fiber development // inferred from mutant phenotype /// 0048769 // sarcomerogenesis // inferred from mutant phenotype /// 0050790 // regulation of catalytic activity // inferred from mutant phenotype /// 0051592 // response to calcium ion // inferred from direct assay /// 0055003 // cardiac myofibril assembly // inferred from mutant phenotype /// 0055008 // cardiac muscle tissue morphogenesis // inferred from mutant phenotype","0000794 // condensed nuclear chromosome // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005865 // striated muscle thin filament // inferred from direct assay /// 0030018 // Z disc // inferred from direct assay /// 0031430 // M band // inferred from direct assay /// 0031674 // I band // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0002020 // protease binding // inferred from physical interaction /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from physical interaction /// 0005516 // calmodulin binding // traceable author statement /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008307 // structural constituent of muscle // inferred from mutant phenotype /// 0008307 // structural constituent of muscle // traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0031433 // telethonin binding // inferred from sequence or structural similarity /// 0042802 // identical protein binding // inferred from physical interaction /// 0042805 // actinin binding // inferred from direct assay /// 0043621 // protein self-association // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from direct assay /// 0051371 // muscle alpha-actinin binding // inferred from physical interaction","chr2:179610044-179672150 (-) // 99.85 // q31.2"]
["11755582_x_at",28.999392,30.214428,31.333563,34.556705,34.26832,30.991203,-0.103761196,-0.044546127,0.007925034,0.14918184,0.13709164,-0.007925034,0.32560775,0.08025,-1.101582,-0.13957696,1.101582,"down","ZFP30",22835,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:38123462-38146312 (-) // 68.43 // q13.12"]
["11716822_a_at",533.22284,513.80646,505.88913,530.55597,482.20782,433.65576,0.064715385,0.0112018585,-0.0112018585,0.057481766,-0.08036804,-0.23347282,0.6057503,0.28601182,1.0770049,0.107024826,1.0770049,"up","BDH2 /// SLC9B2","133308 /// 56898","0006635 // fatty acid beta-oxidation // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009239 // enterobactin biosynthetic process // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0019290 // siderophore biosynthetic process // inferred from sequence or structural similarity /// 0019290 // siderophore biosynthetic process // inferred from electronic annotation /// 0042168 // heme metabolic process // inferred from sequence or structural similarity /// 0055072 // iron ion homeostasis // inferred from sequence or structural similarity /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003858 // 3-hydroxybutyrate dehydrogenase activity // inferred from direct assay /// 0003858 // 3-hydroxybutyrate dehydrogenase activity // inferred from electronic annotation /// 0008667 // 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase activity // inferred from electronic annotation /// 0015297 // antiporter activity // inferred from electronic annotation /// 0015299 // solute:hydrogen antiporter activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016628 // oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor // inferred from sequence or structural similarity /// 0016628 // oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0051287 // NAD binding // inferred from direct assay","chr4:103998764-104021064 (-) // 75.83 // q24"]
["11750944_a_at",177.25743,183.42534,189.8265,155.55618,159.70132,168.74725,0.03549099,0.08483744,0.13432598,-0.15291977,-0.114979744,-0.035491467,0.13753802,0.014284239,1.1376171,0.18601507,1.1376171,"up","EXOC2",55770,"0006810 // transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0000145 // exocyst // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0017160 // Ral GTPase binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from electronic annotation","chr6:486517-693117 (-) // 99.84 // p25.3"]
["11759604_s_at",49.419235,57.83305,56.94658,50.84519,51.22685,55.057472,-0.10384655,0.12297487,0.100690365,-0.06280804,-0.05201912,0.05201912,0.767347,0.4937927,1.0430986,0.060875494,1.0430986,"up","BCL2L13",23786,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // non-traceable author statement /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // non-traceable author statement /// 0042981 // regulation of apoptotic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005739 // mitochondrion // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","0008656 // cysteine-type endopeptidase activator activity involved in apoptotic process // non-traceable author statement","chr22:18121569-18213677 (+) // 94.84 // q11.21"]
["11732127_a_at",6454.219,7161.147,7196.053,7870.865,7632.226,7082.078,-0.15345573,-0.0035076141,0.0035066605,0.13282394,0.08840561,-0.019524574,0.45602724,0.15813006,-1.0855207,-0.1183873,1.0855207,"down","CCT4",10575,"0006457 // protein folding // traceable author statement /// 0006457 // protein folding // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044267 // cellular protein metabolic process // inferred from electronic annotation /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005832 // chaperonin-containing T-complex // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0042470 // melanosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // traceable author statement","chr2:62095223-62116028 (-) // 98.32 // p15"]
["11751365_x_at",91.49918,82.81321,91.08866,87.11565,85.544685,87.71406,0.06588936,-0.07800913,0.059401512,-0.004937649,-0.031191349,0.0049381256,0.83835864,0.61577755,1.0182964,0.026157498,1.0182964,"up","SLC47A1",55244,"0006810 // transport // inferred from electronic annotation /// 0006855 // drug transmembrane transport // inferred from electronic annotation /// 0015695 // organic cation transport // inferred from electronic annotation /// 0015893 // drug transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005451 // monovalent cation:hydrogen antiporter activity // inferred from electronic annotation /// 0015238 // drug transmembrane transporter activity // inferred from electronic annotation /// 0015297 // antiporter activity // inferred from electronic annotation","chr17:19458885-19481250 (+) // 99.78 // p11.2"]
["11719357_at",140.07414,154.3314,151.93372,129.94872,152.77951,168.7655,-0.1212554,0.018584728,-0.0040049553,-0.22950411,0.0040049553,0.147573,0.97891057,0.9392349,-1.0066646,-0.009583135,1.0066646,"down","FAM109B",150368,"0001881 // receptor recycling // inferred from mutant phenotype /// 0007032 // endosome organization // inferred from mutant phenotype /// 0042147 // retrograde transport, endosome to Golgi // inferred from mutant phenotype","0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005769 // early endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0030136 // clathrin-coated vesicle // inferred from direct assay /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0055037 // recycling endosome // inferred from direct assay /// 0055037 // recycling endosome // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction","chr22:42470254-42475442 (+) // 93.62 // q13.2"]
["11742281_at",24.606367,23.666016,22.745508,23.781963,25.258385,24.556173,0.02605486,-0.03015995,-0.08739519,-0.02310896,0.06378555,0.02310896,0.59800994,0.2779885,-1.03653,-0.051761895,1.03653,"down","NAF1",92345,"0006364 // rRNA processing // inferred from electronic annotation /// 0031120 // snRNA pseudouridine synthesis // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from direct assay /// 0042254 // ribosome biogenesis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005732 // small nucleolar ribonucleoprotein complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0030054 // cell junction // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030515 // snoRNA binding // inferred from electronic annotation","chr4:164054303-164088073 (-) // 72.29 // q32.2"]
["11761969_x_at",13.040555,13.783755,14.646896,14.093614,14.58585,13.689354,-0.095999956,-0.016036272,0.07158971,0.016036272,0.065564156,-0.025950909,0.8265853,0.5925242,-1.0224512,-0.032031935,1.0224512,"down","FLJ39061 /// LOC100652824","100652824 /// 165057","","","","chr2:203000438-203062436 (+) // 57.57 // q33.1"]
["11759197_at",9.943417,10.745707,12.543983,10.283051,10.616358,9.803061,-0.071465015,0.040481567,0.26371694,-0.023010254,0.023010254,-0.0919745,0.6690115,0.35690093,1.0779095,0.108236015,1.0779095,"up","RAB9B",51209,"0006810 // transport // inferred from electronic annotation /// 0006895 // Golgi to endosome transport // non-traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // non-traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation","chrX:103077254-103087212 (-) // 89.7 // q22.2"]
["11754043_a_at",2718.3257,2686.9116,2670.303,2839.6934,2636.9988,2596.6123,0.021242142,0.0044727325,-0.0044727325,0.08425903,-0.022579193,-0.04484558,0.9909082,0.97283334,1.001019,0.0014693592,1.001019,"up","RHOA",387,"0000902 // cell morphogenesis // inferred from electronic annotation /// 0006184 // GTP catabolic process // traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007266 // Rho protein signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0030036 // actin cytoskeleton organization // traceable author statement /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030334 // regulation of cell migration // inferred from mutant phenotype /// 0030521 // androgen receptor signaling pathway // inferred from electronic annotation /// 0033144 // negative regulation of intracellular steroid hormone receptor signaling pathway // inferred from electronic annotation /// 0033688 // regulation of osteoblast proliferation // inferred from sequence or structural similarity /// 0033688 // regulation of osteoblast proliferation // inferred from electronic annotation /// 0042346 // positive regulation of NF-kappaB import into nucleus // non-traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0043149 // stress fiber assembly // inferred from electronic annotation /// 0043297 // apical junction assembly // inferred from mutant phenotype /// 0043297 // apical junction assembly // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0043931 // ossification involved in bone maturation // inferred from sequence or structural similarity /// 0043931 // ossification involved in bone maturation // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from mutant phenotype /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0050770 // regulation of axonogenesis // traceable author statement /// 0050771 // negative regulation of axonogenesis // traceable author statement /// 0050772 // positive regulation of axonogenesis // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051301 // cell division // inferred from electronic annotation /// 0051496 // positive regulation of stress fiber assembly // inferred from direct assay /// 0061383 // trabecula morphogenesis // inferred from sequence or structural similarity /// 0061383 // trabecula morphogenesis // inferred from electronic annotation /// 0071777 // positive regulation of cell cycle cytokinesis // inferred from mutant phenotype /// 0090307 // spindle assembly involved in mitosis // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005938 // cell cortex // inferred from direct assay /// 0005938 // cell cortex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030496 // midbody // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from direct assay /// 0032154 // cleavage furrow // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0043296 // apical junction complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0017022 // myosin binding // inferred from physical interaction","chr3:49397620-49449360 (-) // 97.65 // p21.31"]
["11717147_a_at",152.42543,207.68025,188.70322,168.90858,207.00215,213.88127,-0.37477827,0.07148123,-0.066762924,-0.22663927,0.0667634,0.113927364,0.8071482,0.5586313,-1.0777609,-0.108037196,1.0777609,"down","PTPN1",5770,"0006470 // protein dephosphorylation // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from electronic annotation /// 0009966 // regulation of signal transduction // inferred from mutant phenotype /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0030100 // regulation of endocytosis // inferred from direct assay /// 0030168 // platelet activation // traceable author statement /// 0030968 // endoplasmic reticulum unfolded protein response // inferred from direct assay /// 0031532 // actin cytoskeleton reorganization // inferred from mutant phenotype /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from direct assay /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0046626 // regulation of insulin receptor signaling pathway // inferred from electronic annotation /// 0046627 // negative regulation of insulin receptor signaling pathway // non-traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060334 // regulation of interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement /// 0060338 // regulation of type I interferon-mediated signaling pathway // traceable author statement /// 0060397 // JAK-STAT cascade involved in growth hormone signaling pathway // traceable author statement","0005626 // insoluble fraction // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005158 // insulin receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0046875 // ephrin receptor binding // inferred from physical interaction","chr20:49126533-49201656 (+) // 97.36 // q13.13"]
["11758717_x_at",4623.8047,4050.8896,3785.2234,5048.8354,4429.3135,4527.9067,0.04611683,-0.14472485,-0.24258518,0.17298698,-0.015880585,0.015881538,0.4738535,0.17121848,-1.1261458,-0.17139368,1.1261458,"down","NDUFA4",4697,"0006120 // mitochondrial electron transport, NADH to ubiquinone // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005747 // mitochondrial respiratory chain complex I // inferred from direct assay /// 0005747 // mitochondrial respiratory chain complex I // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation","0008137 // NADH dehydrogenase (ubiquinone) activity // non-traceable author statement /// 0008137 // NADH dehydrogenase (ubiquinone) activity // traceable author statement","chr7:10971577-10979804 (-) // 64.93 // p21.3"]
["11731886_at",15.074099,16.173235,15.5694895,13.8969965,13.102286,17.421202,-0.023324966,0.078211546,0.023324966,-0.14062381,-0.22557807,0.18544745,0.7950881,0.5390283,1.0616602,0.08632204,1.0616602,"up","SCGB1D2",10647,"","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement","","chr11:62009681-62012279 (+) // 90.71 // q12.3"]
["11751449_x_at",46.62712,49.62516,50.888363,39.089176,41.658924,43.074535,0.057167053,0.14706945,0.1833334,-0.1972332,-0.10537672,-0.057167053,0.12110021,0.011003092,1.1884784,0.24911562,1.1884784,"up","CEP41",95681,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0018095 // protein polyglutamylation // inferred from sequence or structural similarity /// 0030030 // cell projection organization // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from mutant phenotype /// 0042384 // cilium assembly // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005814 // centriole // inferred from direct assay /// 0005814 // centriole // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0036064 // cilium basal body // inferred from direct assay /// 0036064 // cilium basal body // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0072372 // primary cilium // inferred from direct assay /// 0072372 // primary cilium // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr7:130038371-130080867 (-) // 99.84 // q32.2"]
["11748590_x_at",8.722445,9.450885,9.686056,8.269831,9.513421,9.611615,-0.1204741,-0.0047574043,0.03070283,-0.1973486,0.0047574043,0.019572496,0.9133236,0.76979405,1.0183005,0.02616341,1.0183005,"up","EFCAB6",64800,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr22:43936054-44208117 (-) // 99.88 // q13.2"]
["11754682_a_at",69.203285,52.21039,59.81373,59.14369,62.38941,71.57693,0.17995071,-0.22655249,-0.030412674,-0.04666519,0.030412197,0.22860527,0.79412395,0.5374223,-1.0691435,-0.09645555,1.0691435,"down","PLA2G6",8398,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0032049 // cardiolipin biosynthetic process // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0004623 // phospholipase A2 activity // traceable author statement /// 0004623 // phospholipase A2 activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0047499 // calcium-independent phospholipase A2 activity // inferred from electronic annotation","chr22:38507502-38577835 (-) // 99.17 // q13.1"]
["11755542_a_at",20.83373,21.537546,19.970327,23.611044,20.866507,22.432898,-0.025100231,0.022832394,-0.08616352,0.15544033,-0.022832394,0.08159447,0.47379804,0.17116967,-1.0724258,-0.10087789,1.0724258,"down","ZNF671",79891,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:58231122-58238992 (-) // 98.34 // q13.43"]
["11749263_a_at",267.37915,314.26947,297.3434,202.6302,234.86371,272.2165,-0.012933731,0.22018147,0.14030933,-0.4129715,-0.19999695,0.012933731,0.34171793,0.088125534,1.2447568,0.3158639,1.2447568,"up","SLC2A6",11182,"0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0015758 // glucose transport // non-traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0005355 // glucose transmembrane transporter activity // non-traceable author statement /// 0022857 // transmembrane transporter activity // inferred from electronic annotation /// 0022891 // substrate-specific transmembrane transporter activity // inferred from electronic annotation","chr9:136340163-136344196 (-) // 74.76 // q34.2"]
["11747435_s_at",18.809174,15.125863,15.7936735,18.809174,18.973707,17.475359,0.053057194,-0.26136184,-0.19903255,0.053057194,0.06562233,-0.053057194,0.5136764,0.20140441,-1.1154711,-0.15765317,1.1154711,"down","LOC647859 /// OCLN","100506658 /// 647859","0006461 // protein complex assembly // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0033574 // response to testosterone stimulus // inferred from electronic annotation /// 0045216 // cell-cell junction organization // inferred from mutant phenotype /// 0046498 // S-adenosylhomocysteine metabolic process // inferred from electronic annotation /// 0046500 // S-adenosylmethionine metabolic process // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0005923 // tight junction // inferred from direct assay /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016327 // apicolateral plasma membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008119 // thiopurine S-methyltransferase activity // inferred from electronic annotation /// 0008757 // S-adenosylmethionine-dependent methyltransferase activity // inferred from electronic annotation","chr5:68788589-68850125 (+) // 92.85 // q13.2"]
["11739271_s_at",702.0157,572.259,617.3399,1047.78,953.82837,957.3962,-0.2211132,-0.5159483,-0.40655136,0.3566475,0.2211132,0.22649956,0.062272374,0.0025699267,-1.5683973,-0.64929104,1.5683973,"down","PAK2",5062,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006469 // negative regulation of protein kinase activity // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016032 // viral reproduction // traceable author statement /// 0016310 // phosphorylation // inferred from direct assay /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0031295 // T cell costimulation // traceable author statement /// 0040008 // regulation of growth // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0050690 // regulation of defense response to virus by virus // traceable author statement /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0061098 // positive regulation of protein tyrosine kinase activity // inferred from direct assay /// 2001238 // positive regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype /// 2001271 // negative regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0030296 // protein tyrosine kinase activator activity // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction","chr3:196466727-196559516 (+) // 93.28 // q29"]
["11738428_a_at",7.085282,6.510629,7.107952,6.5938883,6.494233,6.47105,0.11286211,-0.009166241,0.11747074,0.009166241,-0.012804031,-0.01796341,0.412062,0.128236,1.0576942,0.080922574,1.0576942,"up","POU1F1",5449,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0001102 // RNA polymerase II activating transcription factor binding // inferred from physical interaction /// 0001105 // RNA polymerase II transcription coactivator activity // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr3:87308782-87325737 (-) // 99.53 // p11.2"]
["11763045_x_at",10.674841,12.868282,9.59039,10.513449,9.727716,9.999153,0.058157682,0.32776237,-0.09639573,0.036178827,-0.075883865,-0.036179066,0.6991978,0.39587626,1.0880938,0.121802874,1.0880938,"up",0.036178827,-0.075883865,-0.036179066,0.058157682,0.32776237,-0.09639573]
["11734549_s_at",248.67168,218.55614,226.55614,212.58858,181.11737,166.34735,0.20620775,0.01996994,0.071834564,-0.01996994,-0.25110912,-0.3738351,0.27084488,0.05571269,1.2434158,0.31430885,1.2434158,"up","LOC100652886 /// LOC100653157 /// TGFBI","100652886 /// 100653157 /// 7045","0001525 // angiogenesis // inferred from expression pattern /// 0002062 // chondrocyte differentiation // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007162 // negative regulation of cell adhesion // traceable author statement /// 0007601 // visual perception // inferred from electronic annotation /// 0007601 // visual perception // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity","0005178 // integrin binding // traceable author statement /// 0050840 // extracellular matrix binding // inferred from electronic annotation","chr5:135364583-135399507 (+) // 97.57 // q31.1"]
["11724139_s_at",239.33598,275.38965,295.33453,282.25937,368.08698,341.9186,-0.27064848,-0.068211555,0.0326643,-0.0326643,0.35036087,0.24396706,0.39305854,0.11651004,-1.2220358,-0.2892865,1.2220358,"down","SACS",26278,"0006457 // protein folding // non-traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0090084 // negative regulation of inclusion body assembly // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0030424 // axon // traceable author statement /// 0030425 // dendrite // traceable author statement /// 0070852 // cell body fiber // traceable author statement","0005524 // ATP binding // inferred from electronic annotation /// 0030544 // Hsp70 protein binding // inferred from physical interaction /// 0031072 // heat shock protein binding // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from direct assay /// 0070628 // proteasome binding // inferred from physical interaction","chr13:23902965-24007867 (-) // 99.21 // q12.12"]
["11731912_s_at",27.983746,34.877613,29.812536,30.876366,32.49546,42.00606,-0.17878151,0.1389308,-0.08745146,-0.03686762,0.03686762,0.40722704,0.6603969,0.3454176,-1.1314528,-0.1781764,1.1314528,"down","GPR12",2835,"0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0031210 // phosphatidylcholine binding // inferred from electronic annotation","chr13:27329340-27334922 (-) // 88.68 // q12.13"]
["11726731_a_at",213.65956,192.9802,203.24258,210.35912,178.90848,176.42534,0.109485626,-0.037374973,0.037374973,0.08702612,-0.14660597,-0.16676998,0.6097861,0.2897553,1.0806843,0.11194514,1.0806843,"up","AGGF1",55109,"0001525 // angiogenesis // inferred from electronic annotation /// 0001570 // vasculogenesis // traceable author statement /// 0001938 // positive regulation of endothelial cell proliferation // inferred from direct assay /// 0006396 // RNA processing // traceable author statement /// 0007155 // cell adhesion // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from direct assay","0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043499 // eukaryotic cell surface binding // inferred from direct assay","chr5:76326192-76361038 (+) // 95.95 // q13.3"]
["11750787_a_at",11.595386,12.220889,11.058517,9.9918375,11.800288,11.108301,0.030956268,0.10675454,-0.037436724,-0.1837728,0.056227207,-0.030956507,0.6641602,0.3499299,1.0616136,0.0862587,1.0616136,"up","SLC24A2",25769,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0007612 // learning // inferred from electronic annotation /// 0007613 // memory // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0060291 // long-term synaptic potentiation // inferred from electronic annotation /// 0060292 // long term synaptic depression // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005262 // calcium channel activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation /// 0015297 // antiporter activity // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr9:19515977-19786926 (-) // 97.74 // p22.1"]
["11751416_a_at",16.286802,19.79916,20.194817,18.55636,19.583826,23.867039,-0.27384758,0.007888317,0.036434174,-0.08563709,-0.007888317,0.27746868,0.7061308,0.40526548,-1.1002434,-0.13782278,1.1002434,"down","ERBB2",2064,"0001889 // liver development // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from sequence or structural similarity /// 0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // inferred from direct assay /// 0007166 // cell surface receptor signaling pathway // inferred from direct assay /// 0007167 // enzyme linked receptor protein signaling pathway // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from direct assay /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // non-traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007422 // peripheral nervous system development // inferred from electronic annotation /// 0007507 // heart development // traceable author statement /// 0007507 // heart development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0007528 // neuromuscular junction development // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0010001 // glial cell differentiation // inferred from electronic annotation /// 0014065 // phosphatidylinositol 3-kinase cascade // inferred from direct assay /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // traceable author statement /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation /// 0030307 // positive regulation of cell growth // inferred from mutant phenotype /// 0030879 // mammary gland development // traceable author statement /// 0032321 // positive regulation of Rho GTPase activity // inferred from sequence or structural similarity /// 0032321 // positive regulation of Rho GTPase activity // inferred from electronic annotation /// 0032570 // response to progesterone stimulus // inferred from electronic annotation /// 0032886 // regulation of microtubule-based process // inferred from direct assay /// 0033088 // negative regulation of immature T cell proliferation in thymus // inferred from electronic annotation /// 0042060 // wound healing // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043406 // positive regulation of MAP kinase activity // inferred from direct assay /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0043586 // tongue development // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from mutant phenotype /// 0045765 // regulation of angiogenesis // non-traceable author statement /// 0045785 // positive regulation of cell adhesion // inferred from direct assay /// 0045943 // positive regulation of transcription from RNA polymerase I promoter // inferred from mutant phenotype /// 0045945 // positive regulation of transcription from RNA polymerase III promoter // inferred from direct assay /// 0046579 // positive regulation of Ras protein signal transduction // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement /// 0048485 // sympathetic nervous system development // inferred from electronic annotation /// 0048678 // response to axon injury // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from direct assay /// 0060056 // mammary gland involution // inferred from electronic annotation /// 0060209 // estrus // inferred from electronic annotation /// 0070372 // regulation of ERK1 and ERK2 cascade // inferred from mutant phenotype","0005576 // extracellular region // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // non-traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005902 // microvillus // inferred from electronic annotation /// 0009925 // basal plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0043219 // lateral loop // inferred from electronic annotation /// 0043235 // receptor complex // inferred from direct assay /// 0043235 // receptor complex // traceable author statement /// 0045121 // membrane raft // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0001042 // RNA polymerase I core binding // inferred from direct assay /// 0001948 // glycoprotein binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from genetic interaction /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from direct assay /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from direct assay /// 0004716 // receptor signaling protein tyrosine kinase activity // inferred from electronic annotation /// 0004716 // receptor signaling protein tyrosine kinase activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from direct assay /// 0005006 // epidermal growth factor-activated receptor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from direct assay /// 0019903 // protein phosphatase binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0043125 // ErbB-3 class receptor binding // traceable author statement /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction /// 0046982 // protein heterodimerization activity // non-traceable author statement /// 0046982 // protein heterodimerization activity // inferred from electronic annotation /// 0046983 // protein dimerization activity // non-traceable author statement /// 0051879 // Hsp90 protein binding // inferred from electronic annotation","chr17:37856479-37868583 (+) // 99.77 // q12"]
["11752690_a_at",157.19266,128.04654,135.22284,123.26526,115.12462,117.07013,0.32331705,0.027451038,0.10612202,-0.027450562,-0.12602043,-0.101843834,0.2904049,0.063701525,1.1788676,0.23740166,1.1788676,"up","RBCK1",10616,"0000209 // protein polyubiquitination // inferred from direct assay /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0042346 // positive regulation of NF-kappaB import into nucleus // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from mutant phenotype /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0050852 // T cell receptor signaling pathway // inferred from direct assay /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0097039 // protein linear polyubiquitination // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0071797 // LUBAC complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005080 // protein kinase C binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0043130 // ubiquitin binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:388947-411115 (+) // 100.0 // p13"]
["11719725_at",406.15024,431.72253,434.66742,463.2261,483.0967,447.88925,-0.11951351,-0.031422615,-0.021615028,0.070189476,0.13078499,0.021615028,0.23257752,0.041124243,-1.0955942,-0.1317135,1.0955942,"down","KIAA0020",9933,"","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay","0003723 // RNA binding // inferred from electronic annotation","chr9:2804162-2844224 (-) // 95.8 // p24.2"]
["11723300_at",86.88715,105.83228,98.02563,92.32923,100.42189,80.60045,-0.13083029,0.15373468,0.04318571,-0.043186188,0.07802868,-0.23918486,0.7766861,0.5078292,1.0644765,0.09014408,1.0644765,"up","RPS6KB1",6198,"0000082 // G1/S transition of mitotic cell cycle // inferred from mutant phenotype /// 0003009 // skeletal muscle contraction // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007281 // germ cell development // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0007584 // response to nutrient // inferred from electronic annotation /// 0007616 // long-term memory // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0009408 // response to heat // inferred from electronic annotation /// 0009611 // response to wounding // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009636 // response to toxin // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014732 // skeletal muscle atrophy // inferred from electronic annotation /// 0014878 // response to electrical stimulus involved in regulation of muscle adaptation // inferred from electronic annotation /// 0014911 // positive regulation of smooth muscle cell migration // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0031929 // TOR signaling cascade // inferred from direct assay /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0032870 // cellular response to hormone stimulus // inferred from electronic annotation /// 0033574 // response to testosterone stimulus // inferred from electronic annotation /// 0033762 // response to glucagon stimulus // inferred from electronic annotation /// 0034612 // response to tumor necrosis factor // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043200 // response to amino acid stimulus // inferred from electronic annotation /// 0043201 // response to leucine // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from mutant phenotype /// 0045931 // positive regulation of mitotic cell cycle // inferred from mutant phenotype /// 0045948 // positive regulation of translational initiation // inferred from mutant phenotype /// 0046324 // regulation of glucose import // inferred from electronic annotation /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from mutant phenotype /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from electronic annotation /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0048633 // positive regulation of skeletal muscle tissue growth // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from direct assay","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004711 // ribosomal protein S6 kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation","chr17:57970442-58027923 (+) // 98.94 // q23.1"]
["11759621_at",26.41228,30.423857,26.3937,29.461563,29.755852,31.102304,-0.16479492,0.039199352,-0.16581011,-0.0071697235,0.0071697235,0.07101774,0.47215438,0.1699641,-1.0873436,-0.120807864,1.0873436,"down","TCL6",27004,"","","","chr14:96131202-96136751 (+) // 60.7 // q32.13"]
["11749853_a_at",76.47448,67.21444,77.86704,70.614426,63.93782,62.62199,0.1506114,-0.035595894,0.17664576,0.035595894,-0.10769796,-0.1376977,0.40263858,0.12254005,1.122841,0.16715364,1.122841,"up","DTNB",1838,"","0005737 // cytoplasm // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:25655753-25861963 (-) // 87.22 // p23.3"]
["11722119_at",37.90269,41.571583,41.257767,39.559376,41.822643,50.335533,-0.12783146,0.0054659843,-0.0054659843,-0.06611204,0.014152527,0.2814455,0.6659656,0.35290644,-1.0860615,-0.11910577,1.0860615,"down","LZTS1",11178,"0006351 // transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0006385 // transcription elongation from RNA polymerase III promoter // traceable author statement /// 0006386 // termination of RNA polymerase III transcription // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016242 // negative regulation of macroautophagy // inferred from mutant phenotype /// 0048814 // regulation of dendrite morphogenesis // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr8:20103680-20161462 (-) // 93.11 // p21.3"]
["11740738_x_at",41.06077,54.27201,53.012985,41.881462,51.050304,63.5967,-0.341372,0.061075687,0.027213097,-0.3128209,-0.027213097,0.28981924,0.9136106,0.7704514,-1.0479884,-0.067622766,1.0479884,"down","ECE2",9718,"0006508 // proteolysis // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0007420 // brain development // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from sequence or structural similarity /// 0008152 // metabolic process // inferred from electronic annotation /// 0010002 // cardioblast differentiation // inferred from sequence or structural similarity /// 0016486 // peptide hormone processing // inferred from direct assay /// 0032259 // methylation // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from direct assay","0003824 // catalytic activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // inferred from direct assay /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:183993798-184010818 (+) // 96.15 // q27.1"]
["11720995_at",13.315049,10.661235,12.249223,12.588888,13.345429,12.09419,0.100637436,-0.22004557,-0.01973033,0.019730568,0.10392523,-0.038106203,0.7746044,0.50434357,-1.0532851,-0.07489602,1.0532851,"down","ADCY2",108,"0006112 // energy reserve metabolic process // traceable author statement /// 0006171 // cAMP biosynthetic process // inferred from sequence or structural similarity /// 0006171 // cAMP biosynthetic process // non-traceable author statement /// 0006171 // cAMP biosynthetic process // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // inferred from sequence or structural similarity /// 0007189 // adenylate cyclase-activating G-protein coupled receptor signaling pathway // traceable author statement /// 0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0009190 // cyclic nucleotide biosynthetic process // inferred from electronic annotation /// 0034199 // activation of protein kinase A activity // traceable author statement /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0071377 // cellular response to glucagon stimulus // traceable author statement","0005622 // intracellular // inferred from sequence or structural similarity /// 0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045121 // membrane raft // inferred from sequence or structural similarity","0000166 // nucleotide binding // inferred from electronic annotation /// 0004016 // adenylate cyclase activity // inferred from sequence or structural similarity /// 0004016 // adenylate cyclase activity // non-traceable author statement /// 0004016 // adenylate cyclase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008179 // adenylate cyclase binding // inferred from sequence or structural similarity /// 0008294 // calcium- and calmodulin-responsive adenylate cyclase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016849 // phosphorus-oxygen lyase activity // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from sequence or structural similarity","chr5:7396320-7830194 (+) // 87.29 // p15.31"]
["11728820_a_at",207.12302,223.69754,223.88957,242.3027,235.7977,207.30142,-0.11168051,-0.00061893463,0.00061893463,0.11464214,0.0753808,-0.11043882,0.74700177,0.46368197,-1.0451825,-0.06375483,1.0451825,"down","HAUS2",55142,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0051225 // spindle assembly // inferred from mutant phenotype /// 0051297 // centrosome organization // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0070652 // HAUS complex // inferred from direct assay","","chr15:42841007-42862188 (+) // 46.98 // q15.2"]
["11745381_a_at",53.249565,42.726604,41.963795,49.720318,38.67207,41.75135,0.33062983,0.012994766,-0.012994766,0.23169565,-0.13084793,-0.020317078,0.8390479,0.6169835,1.0594873,0.08336635,1.0594873,"up","COBLL1",22837,"","","0003779 // actin binding // inferred from electronic annotation","chr2:165599744-165698650 (-) // 96.76 // q24.3"]
["11752491_x_at",122.98906,109.40286,118.33508,132.83711,122.38955,123.477745,0.0035247803,-0.1653552,-0.05212736,0.11465216,-0.003525257,0.009245396,0.4424005,0.14774448,-1.0803086,-0.11144343,1.0803086,"down","TOM1",10043,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006897 // endocytosis // non-traceable author statement /// 0015031 // protein transport // non-traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016197 // endosomal transport // non-traceable author statement /// 0016197 // endosomal transport // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // traceable author statement /// 0005768 // endosome // traceable author statement /// 0005769 // early endosome // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr22:35695886-35743621 (+) // 98.88 // q12.3"]
["11738144_a_at",103.59054,118.55458,127.220726,128.59706,142.7162,151.41396,-0.30420256,-0.1095438,-0.0077619553,0.0077619553,0.1580534,0.24340296,0.29782042,0.06704652,-1.2115961,-0.27690887,1.2115961,"down","SSX2IP",117178,"0007155 // cell adhesion // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation","chr1:85109598-85156180 (-) // 91.25 // p22.3"]
["11744106_x_at",94.61248,89.90151,98.601555,82.14613,90.81325,101.6175,0.029563904,-0.044121265,0.089143276,-0.17427397,-0.029563904,0.13261032,0.8526082,0.64148325,1.034264,0.04860444,1.034264,"up","ATP9B",374868,"0006812 // cation transport // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0015914 // phospholipid transport // inferred from electronic annotation /// 0015917 // aminophospholipid transport // non-traceable author statement /// 0045332 // phospholipid translocation // non-traceable author statement /// 0072600 // establishment of protein localization in Golgi // inferred from mutant phenotype","0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004012 // phospholipid-translocating ATPase activity // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0015247 // aminophospholipid transporter activity // non-traceable author statement /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0019829 // cation-transporting ATPase activity // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr18:76829391-77138280 (+) // 99.27 // q23"]
["11736447_at",686.5276,689.9981,658.46185,964.7523,971.9478,972.22736,-0.24905777,-0.24178314,-0.30927563,0.24178314,0.2525034,0.25291824,0.011758996,1.8568715e-5,-1.4297608,-0.51577383,1.4297608,"down","TMPO",7112,"0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005521 // lamin binding // traceable author statement","chr12:98909407-98928706 (+) // 97.94 // q23.1"]
["11751175_a_at",12.257262,16.46768,15.712312,14.753556,15.633532,14.567067,-0.3092165,0.116784096,0.049042225,-0.041790485,0.041790485,-0.060142756,0.9454119,0.848105,-1.0194204,-0.027749108,1.0194204,"down","SORCS3",22986,"0007218 // neuropeptide signaling pathway // non-traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0008188 // neuropeptide receptor activity // non-traceable author statement","chr10:106937524-107007093 (+) // 96.41 // q25.1"]
["11748470_a_at",120.96893,169.85555,155.69568,136.65056,155.82779,167.54955,-0.36470413,0.124967575,-0.0006117821,-0.18884945,0.0006117821,0.10524702,0.9147598,0.77333075,-1.0370264,-0.052452628,1.0370264,"down","MTA2",9219,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006333 // chromatin assembly or disassembly // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016575 // histone deacetylation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0000118 // histone deacetylase complex // traceable author statement /// 0000118 // histone deacetylase complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0016581 // NuRD complex // inferred from direct assay /// 0016581 // NuRD complex // inferred from electronic annotation /// 0016585 // chromatin remodeling complex // inferred from electronic annotation","0000989 // transcription factor binding transcription factor activity // inferred from electronic annotation /// 0001085 // RNA polymerase II transcription factor binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0004407 // histone deacetylase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:62361313-62368764 (-) // 95.88 // q12.3"]
["11755982_a_at",493.05972,427.18298,421.57806,369.97412,381.49832,350.29715,0.29802418,0.09111595,0.07206154,-0.116313934,-0.07206154,-0.19515896,0.1824602,0.025255196,1.2155243,0.28157875,1.2155243,"up","TNPO3",23534,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0035048 // splicing factor protein import into nucleus // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0004872 // receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr7:128595160-128622380 (-) // 93.94 // q32.1"]
["11729632_a_at",2293.648,2016.3755,2186.5786,2102.6826,1890.9323,1917.0555,0.15564632,-0.030233383,0.08667755,0.030233383,-0.12290001,-0.103105545,0.42092645,0.13399428,1.0988194,0.13595425,1.0988194,"up","CSDA",8531,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0009409 // response to cold // traceable author statement /// 0009566 // fertilization // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0046622 // positive regulation of organ growth // inferred from electronic annotation /// 0048642 // negative regulation of skeletal muscle tissue development // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005844 // polysome // inferred from electronic annotation /// 0005921 // gap junction // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // traceable author statement /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0003730 // mRNA 3'-UTR binding // inferred from electronic annotation","chr12:10851685-10876047 (-) // 90.76 // p13.2"]
["11729135_a_at",524.95703,411.5125,427.32703,455.55576,424.2776,431.05612,0.29059124,-0.060671806,-0.0062675476,0.086019516,-0.016599655,0.0062675476,0.87507945,0.6863063,1.0347781,0.04932145,1.0347781,"up","STK24",8428,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from mutant phenotype /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0008631 // induction of apoptosis by oxidative stress // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048679 // regulation of axon regeneration // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr13:99102454-99229400 (-) // 95.03 // q32.2"]
["11759487_at",14.483147,20.475351,13.826438,12.511597,13.920251,18.101515,0.02859521,0.5281081,-0.038350582,-0.18251419,-0.02859497,0.35033035,0.8433618,0.6245986,1.0915493,0.12637725,1.0915493,"up","ARHGEF40",55701,"0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation","chr14:21538526-21558407 (+) // 96.76 // q11.2"]
["11743084_s_at",2191.2986,2155.195,2091.3655,1921.3436,1818.8715,1781.5671,0.1285057,0.104537964,0.061164856,-0.061164856,-0.14023685,-0.17013359,0.077862546,0.004291948,1.1662804,0.22191466,1.1662804,"up","BNIP3",664,"0001666 // response to hypoxia // inferred from sequence or structural similarity /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0006309 // apoptotic DNA fragmentation // inferred from direct assay /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006915 // apoptotic process // inferred from direct assay /// 0006915 // apoptotic process // inferred from physical interaction /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0008219 // cell death // inferred from direct assay /// 0008219 // cell death // inferred from sequence or structural similarity /// 0008219 // cell death // inferred from electronic annotation /// 0008629 // induction of apoptosis by intracellular signals // inferred from electronic annotation /// 0008634 // negative regulation of survival gene product expression // inferred from direct assay /// 0010637 // negative regulation of mitochondrial fusion // inferred from direct assay /// 0035694 // mitochondrial protein catabolic process // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043243 // positive regulation of protein complex disassembly // inferred from direct assay /// 0043653 // mitochondrial fragmentation involved in apoptotic process // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045837 // negative regulation of membrane potential // inferred from direct assay /// 0046902 // regulation of mitochondrial membrane permeability // inferred from direct assay /// 0048102 // autophagic cell death // inferred from electronic annotation /// 0050873 // brown fat cell differentiation // inferred from electronic annotation /// 0051402 // neuron apoptotic process // inferred from sequence or structural similarity /// 0051402 // neuron apoptotic process // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from direct assay /// 0055093 // response to hyperoxia // inferred from electronic annotation /// 0070301 // cellular response to hydrogen peroxide // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern /// 0071279 // cellular response to cobalt ion // inferred from mutant phenotype /// 0071456 // cellular response to hypoxia // inferred from mutant phenotype /// 0072593 // reactive oxygen species metabolic process // inferred from direct assay /// 0090141 // positive regulation of mitochondrial fission // inferred from direct assay /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005654 // nucleoplasm // inferred from sequence or structural similarity /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005740 // mitochondrial envelope // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0031307 // integral to mitochondrial outer membrane // inferred from direct assay /// 0031966 // mitochondrial membrane // inferred from direct assay /// 0031966 // mitochondrial membrane // inferred from mutant phenotype /// 0031966 // mitochondrial membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay /// 0051020 // GTPase binding // inferred from physical interaction","chr10:133781190-133795488 (-) // 97.05 // q26.3"]
["11727560_a_at",31.508034,22.25578,26.130754,24.76222,24.665638,27.130678,0.30877495,-0.19276476,0.038804054,-0.038804054,-0.044442177,0.092980385,0.91161674,0.7658678,1.0340887,0.048359983,1.0340887,"up","FKBP7",51661,"0000413 // protein peptidyl-prolyl isomerization // not recorded /// 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006457 // protein folding // inferred from electronic annotation /// 0018208 // peptidyl-proline modification // not recorded","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // inferred from electronic annotation /// 0016020 // membrane // not recorded","0003755 // peptidyl-prolyl cis-trans isomerase activity // not recorded /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005528 // FK506 binding // not recorded /// 0016853 // isomerase activity // inferred from electronic annotation","chr2:179328314-179343356 (-) // 86.67 // q31.2"]
["11724663_at",100.094,96.92711,102.723976,105.526695,115.53894,88.33261,-0.018708706,-0.06509209,0.018709183,0.05754423,0.18831491,-0.19904661,0.9110193,0.7645158,-1.0261925,-0.03730145,1.0261925,"down","TMEM120B",144404,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:122150657-122219965 (+) // 71.93 // q24.31"]
["11723089_s_at",482.03128,463.32654,459.2445,582.3214,571.5732,528.05634,-0.06578255,-0.12287998,-0.13564682,0.20690632,0.18002892,0.06578255,0.08988967,0.005837178,-1.1966565,-0.25900903,1.1966565,"down","CXorf40A /// CXorf40B","541578 /// 91966","","","0005515 // protein binding // inferred from physical interaction","chrX:148622518-148629312 (+) // 98.57 // q28"]
["11723123_at",85.590866,71.95286,74.22287,87.05618,74.33359,68.56632,0.2045188,-0.045886993,-0.001074791,0.2290082,0.0010752678,-0.11543846,0.96998096,0.91586965,1.0099641,0.014304024,1.0099641,"up","SH3PXD2B",285590,"0001501 // skeletal system development // inferred from mutant phenotype /// 0001501 // skeletal system development // inferred from electronic annotation /// 0001654 // eye development // inferred from mutant phenotype /// 0001654 // eye development // inferred from electronic annotation /// 0006801 // superoxide metabolic process // inferred from direct assay /// 0007154 // cell communication // inferred from electronic annotation /// 0007507 // heart development // inferred from mutant phenotype /// 0007507 // heart development // inferred from electronic annotation /// 0022617 // extracellular matrix disassembly // inferred from mutant phenotype /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045600 // positive regulation of fat cell differentiation // inferred from electronic annotation /// 0060348 // bone development // inferred from mutant phenotype /// 0060348 // bone development // inferred from electronic annotation /// 0060612 // adipose tissue development // inferred from sequence or structural similarity /// 0060612 // adipose tissue development // inferred from electronic annotation /// 0071800 // podosome assembly // inferred from sequence or structural similarity /// 0071800 // podosome assembly // inferred from electronic annotation /// 0072657 // protein localization in membrane // inferred from direct assay","0002102 // podosome // inferred from sequence or structural similarity /// 0002102 // podosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0010314 // phosphatidylinositol-5-phosphate binding // inferred from sequence or structural similarity /// 0010314 // phosphatidylinositol-5-phosphate binding // inferred from electronic annotation /// 0032266 // phosphatidylinositol-3-phosphate binding // inferred from sequence or structural similarity /// 0032266 // phosphatidylinositol-3-phosphate binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation /// 0042169 // SH2 domain binding // inferred from sequence or structural similarity /// 0042169 // SH2 domain binding // inferred from electronic annotation /// 0070273 // phosphatidylinositol-4-phosphate binding // inferred from electronic annotation /// 0080025 // phosphatidylinositol-3,5-bisphosphate binding // inferred from sequence or structural similarity /// 0080025 // phosphatidylinositol-3,5-bisphosphate binding // inferred from electronic annotation","chr5:171760502-171881527 (-) // 91.29 // q35.1"]
["11728821_a_at",7.759464,7.332779,7.845732,7.1163945,8.045432,8.407898,-0.007975578,-0.08957243,0.007975578,-0.13278604,0.044237375,0.10781288,0.86489296,0.6662977,-1.0254655,-0.03627894,1.0254655,"down","HEPACAM2",253012,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr7:92817898-92855837 (-) // 98.58 // q21.3"]
["11715351_at",71.12878,81.52648,77.378426,78.90766,75.14012,73.22289,-0.100324154,0.096511364,0.021173954,0.04940796,-0.02117443,-0.05846262,0.9343656,0.8205048,1.0110563,0.01586334,1.0110563,"up","COL1A1",1277,"0001501 // skeletal system development // inferred from mutant phenotype /// 0001501 // skeletal system development // inferred from electronic annotation /// 0001503 // ossification // inferred from electronic annotation /// 0001568 // blood vessel development // inferred from mutant phenotype /// 0001568 // blood vessel development // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001957 // intramembranous ossification // inferred from electronic annotation /// 0001958 // endochondral ossification // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007584 // response to nutrient // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0007601 // visual perception // inferred from mutant phenotype /// 0007605 // sensory perception of sound // inferred from mutant phenotype /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0010035 // response to inorganic substance // inferred from electronic annotation /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from direct assay /// 0010812 // negative regulation of cell-substrate adhesion // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030199 // collagen fibril organization // inferred from mutant phenotype /// 0030335 // positive regulation of cell migration // inferred from direct assay /// 0031960 // response to corticosteroid stimulus // inferred from electronic annotation /// 0032964 // collagen biosynthetic process // inferred from mutant phenotype /// 0034504 // protein localization to nucleus // inferred from direct assay /// 0034505 // tooth mineralization // inferred from mutant phenotype /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0043588 // skin development // inferred from electronic annotation /// 0043589 // skin morphogenesis // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0048705 // skeletal system morphogenesis // inferred from electronic annotation /// 0048706 // embryonic skeletal system development // inferred from mutant phenotype /// 0050900 // leukocyte migration // traceable author statement /// 0051591 // response to cAMP // inferred from electronic annotation /// 0060325 // face morphogenesis // inferred from electronic annotation /// 0060346 // bone trabecula formation // inferred from electronic annotation /// 0060351 // cartilage development involved in endochondral bone morphogenesis // inferred from electronic annotation /// 0070208 // protein heterotrimerization // inferred from electronic annotation /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from electronic annotation /// 0071300 // cellular response to retinoic acid // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from direct assay","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005584 // collagen type I // inferred from mutant phenotype /// 0005584 // collagen type I // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0031012 // extracellular matrix // inferred from electronic annotation","0005201 // extracellular matrix structural constituent // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from direct assay /// 0048407 // platelet-derived growth factor binding // inferred from direct assay","chr17:48260649-48279005 (-) // 87.66 // q21.33"]
["11729376_x_at",20.545279,14.901864,15.583315,13.655132,14.552414,15.793671,0.43105936,-0.032254696,0.032254696,-0.15830421,-0.06648922,0.051599026,0.5884846,0.26909584,1.1498278,0.20141786,1.1498278,"up","TAC3",6866,"0007217 // tachykinin receptor signaling pathway // inferred from electronic annotation /// 0007217 // tachykinin receptor signaling pathway // traceable author statement /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007565 // female pregnancy // traceable author statement /// 0043278 // response to morphine // inferred from electronic annotation /// 0045777 // positive regulation of blood pressure // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005625 // soluble fraction // traceable author statement","0005102 // receptor binding // traceable author statement","chr12:57403783-57410318 (-) // 89.79 // q13.3"]
["11756341_a_at",353.04095,332.42596,331.19217,421.66782,402.58792,403.21515,-0.09473419,-0.18153667,-0.18690109,0.16153717,0.09473419,0.096980095,0.05342409,0.001827174,-1.2075987,-0.2721411,1.2075987,"down","RBM23",55147,"0006397 // mRNA processing // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr14:23369907-23388361 (-) // 96.22 // q11.2"]
["11729406_a_at",330.11615,333.96024,342.77222,383.50037,336.32562,335.36923,-0.024830818,-0.008128166,0.029445648,0.19142342,0.0020542145,-0.0020542145,0.6861511,0.3793313,-1.0460696,-0.064978875,1.0460696,"down","IFNGR1",3459,"0007165 // signal transduction // traceable author statement /// 0009615 // response to virus // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060334 // regulation of interferon-gamma-mediated signaling pathway // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004906 // interferon-gamma receptor activity // traceable author statement /// 0019955 // cytokine binding // inferred from electronic annotation","chr6:137518620-137540567 (-) // 98.65 // q23.3"]
["11748406_a_at",281.67355,336.86765,343.2706,391.0742,382.31476,371.65762,-0.3426361,-0.08447838,-0.05731392,0.13078213,0.09810066,0.05731392,0.26041245,0.05131277,-1.1948878,-0.2568751,1.1948878,"down","SCAF8",22828,"0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016363 // nuclear matrix // inferred from sequence or structural similarity /// 0016363 // nuclear matrix // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0043175 // RNA polymerase core enzyme binding // inferred from physical interaction /// 0070063 // RNA polymerase binding // inferred from electronic annotation","chr6:155054549-155155131 (+) // 98.89 // q25.2"]
["11723489_at",60.087273,58.659462,52.89198,82.948586,63.813805,54.306732,0.017347813,-0.017347813,-0.1666627,0.4825058,0.10415697,-0.12858057,0.6443295,0.32738903,-1.1552846,-0.20824835,1.1552846,"down","GCLM",2730,"0000096 // sulfur amino acid metabolic process // traceable author statement /// 0006534 // cysteine metabolic process // inferred from electronic annotation /// 0006536 // glutamate metabolic process // inferred from direct assay /// 0006749 // glutathione metabolic process // inferred from electronic annotation /// 0006750 // glutathione biosynthetic process // inferred from direct assay /// 0006750 // glutathione biosynthetic process // inferred from electronic annotation /// 0006750 // glutathione biosynthetic process // inferred from mutant phenotype /// 0006750 // glutathione biosynthetic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0006979 // response to oxidative stress // inferred from direct assay /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0035229 // positive regulation of glutamate-cysteine ligase activity // inferred from electronic annotation /// 0042493 // response to drug // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0050880 // regulation of blood vessel size // inferred from mutant phenotype /// 0051409 // response to nitrosative stress // inferred from electronic annotation /// 0051900 // regulation of mitochondrial depolarization // inferred from electronic annotation","0005625 // soluble fraction // inferred from direct assay /// 0005829 // cytosol // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0017109 // glutamate-cysteine ligase complex // inferred from electronic annotation","0004357 // glutamate-cysteine ligase activity // inferred from direct assay /// 0004357 // glutamate-cysteine ligase activity // inferred from mutant phenotype /// 0035226 // glutamate-cysteine ligase catalytic subunit binding // inferred from physical interaction /// 0035226 // glutamate-cysteine ligase catalytic subunit binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr1:94352059-94375320 (-) // 84.58 // p22.1"]
["11725191_s_at",26.757048,28.636972,30.39477,24.912933,25.116678,24.543516,0.045636654,0.14359665,0.22954082,-0.057387352,-0.045636654,-0.07894039,0.16535924,0.020702697,1.1488944,0.20024623,1.1488944,"up","GPR126",57211,"0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement","chr6:142623055-142767401 (+) // 99.03 // q24.1"]
["11725062_at",71.41296,73.02314,72.06098,84.705414,78.66335,87.00492,-0.08583641,-0.053668976,-0.07280445,0.16043186,0.053668976,0.19907475,0.11277267,0.009392586,-1.1554823,-0.20849515,1.1554823,"down","USP7",7874,"0006281 // DNA repair // inferred from electronic annotation /// 0006283 // transcription-coupled nucleotide-excision repair // inferred from mutant phenotype /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016579 // protein deubiquitination // inferred from direct assay /// 0016579 // protein deubiquitination // inferred from mutant phenotype /// 0031647 // regulation of protein stability // inferred from electronic annotation /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation","0002039 // p53 binding // inferred from direct assay /// 0004197 // cysteine-type endopeptidase activity // traceable author statement /// 0004221 // ubiquitin thiolesterase activity // inferred from mutant phenotype /// 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0004843 // ubiquitin-specific protease activity // inferred from mutant phenotype /// 0004843 // ubiquitin-specific protease activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr16:8985953-9057341 (-) // 95.32 // p13.2"]
["11746819_a_at",14.248394,14.340853,12.997428,14.650086,14.852015,16.619827,-0.024720907,-0.015388966,-0.15729403,0.015389204,0.035138845,0.19738531,0.38853905,0.114083655,-1.1083696,-0.14843903,1.1083696,"down","FGB",2244,"0002576 // platelet degranulation // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0007596 // blood coagulation // inferred from electronic annotation /// 0007599 // hemostasis // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0030168 // platelet activation // inferred from electronic annotation /// 0051258 // protein polymerization // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from direct assay","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005577 // fibrinogen complex // inferred from electronic annotation /// 0005577 // fibrinogen complex // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005625 // soluble fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005938 // cell cortex // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0031091 // platelet alpha granule // inferred from direct assay /// 0031093 // platelet alpha granule lumen // traceable author statement","0005102 // receptor binding // inferred from electronic annotation /// 0030674 // protein binding, bridging // inferred from electronic annotation /// 0043499 // eukaryotic cell surface binding // inferred from direct assay /// 0051087 // chaperone binding // inferred from physical interaction","chr4:155484162-155492138 (+) // 96.95 // q31.3"]
["11741119_a_at",84.93414,80.55621,82.727905,71.22288,68.52192,69.82041,0.16517591,0.08882761,0.12720585,-0.08882713,-0.14460278,-0.11751938,0.03844363,0.0008654434,1.1843151,0.24405296,1.1843151,"up","ANKRD5",63926,"","","0005509 // calcium ion binding // inferred from electronic annotation","chr20:10015471-10037405 (+) // 82.95 // p12.2"]
["11747355_a_at",1556.5513,896.9126,753.7819,1228.7792,695.99036,760.64136,0.91418934,0.1188755,-0.13194466,0.57306194,-0.24702454,-0.1188755,0.8300892,0.59875643,1.1739081,0.23131949,1.1739081,"up","FSCN1 /// LOC100653350","100653350 /// 6624","0008283 // cell proliferation // traceable author statement /// 0016477 // cell migration // inferred from mutant phenotype /// 0016477 // cell migration // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from direct assay /// 0030036 // actin cytoskeleton organization // traceable author statement /// 0048870 // cell motility // inferred from direct assay /// 0051017 // actin filament bundle assembly // inferred from direct assay /// 0051017 // actin filament bundle assembly // inferred from electronic annotation /// 0051017 // actin filament bundle assembly // traceable author statement","0001725 // stress fiber // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0015629 // actin cytoskeleton // traceable author statement /// 0030054 // cell junction // inferred from electronic annotation /// 0030175 // filopodium // inferred from direct assay /// 0030175 // filopodium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0071437 // invadopodium // inferred from direct assay /// 0071437 // invadopodium // inferred from electronic annotation","0003779 // actin binding // inferred from direct assay /// 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008144 // drug binding // inferred from direct assay /// 0008144 // drug binding // inferred from electronic annotation /// 0030674 // protein binding, bridging // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from direct assay /// 0051015 // actin filament binding // inferred from electronic annotation","chr7:5632455-5646279 (+) // 98.71 // p22.1"]
["11756802_a_at",16.730263,18.476562,20.3015,18.920866,18.050714,22.736818,-0.16037703,-0.017140865,0.11874914,0.017140865,-0.05078125,0.28219318,0.7536,0.47370234,-1.073588,-0.10244047,1.073588,"down","RD3",343035,"0007601 // visual perception // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0060041 // retina development in camera-type eye // inferred from electronic annotation","","","chr1:211649883-211665373 (-) // 65.81 // q32.3"]
["11720880_s_at",270.23087,235.91495,249.177,205.97331,193.45975,199.08383,0.29383087,0.09790516,0.17680931,-0.09790468,-0.18832827,-0.14698553,0.0906368,0.005958046,1.2604346,0.33392128,1.2604346,"up","EHD4",30844,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0006907 // pinocytosis // inferred from electronic annotation /// 0030100 // regulation of endocytosis // inferred from electronic annotation /// 0032456 // endocytic recycling // inferred from genetic interaction /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0051260 // protein homooligomerization // inferred from physical interaction /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation","0005634 // nucleus // traceable author statement /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0055038 // recycling endosome membrane // inferred from direct assay /// 0055038 // recycling endosome membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // traceable author statement /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr15:42191637-42264776 (-) // 89.84 // q15.1"]
["11750173_x_at",171.95981,122.25674,122.722885,148.38953,123.22282,121.05617,0.4837346,-0.008422852,-0.0029325485,0.27105236,0.0029330254,-0.022660255,0.88864255,0.71544766,1.0524011,0.07368461,1.0524011,"up","CLTCL1",8218,"0006886 // intracellular protein transport // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // inferred from direct assay /// 0006898 // receptor-mediated endocytosis // traceable author statement /// 0007067 // mitosis // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0046326 // positive regulation of glucose import // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005819 // spindle // inferred from direct assay /// 0005905 // coated pit // inferred from direct assay /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030130 // clathrin coat of trans-Golgi network vesicle // inferred from electronic annotation /// 0030132 // clathrin coat of coated pit // inferred from electronic annotation /// 0030135 // coated vesicle // inferred from direct assay /// 0030136 // clathrin-coated vesicle // inferred from direct assay /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0004871 // signal transducer activity // traceable author statement /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr22:19167287-19195184 (-) // 93.4 // q11.21"]
["11720003_at",296.41122,272.3214,281.21402,261.8562,244.49957,278.59406,0.10586262,-0.01642704,0.029931068,-0.07296276,-0.17190552,0.01642704,0.44434285,0.14919251,1.0836779,0.115935996,1.0836779,"up","NRARP",441478,"0001569 // patterning of blood vessels // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // inferred from electronic annotation /// 0002040 // sprouting angiogenesis // inferred from electronic annotation /// 0002043 // blood vessel endothelial cell proliferation involved in sprouting angiogenesis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0022407 // regulation of cell-cell adhesion // inferred from electronic annotation /// 0045581 // negative regulation of T cell differentiation // inferred from electronic annotation /// 0045746 // negative regulation of Notch signaling pathway // inferred from mutant phenotype /// 0045746 // negative regulation of Notch signaling pathway // inferred from electronic annotation /// 0090263 // positive regulation of canonical Wnt receptor signaling pathway // inferred from mutant phenotype","","","chr9:140194093-140196723 (-) // 81.17 // q34.3"]
["11754246_x_at",8021.3286,7669.5503,7656.2285,8323.888,7727.07,7845.1997,0.042975426,-0.021723747,-0.02423191,0.09639263,-0.010944366,0.010944366,0.737304,0.44833812,-1.0232257,-0.033124357,1.0232257,"down","PABPC1",26986,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from electronic annotation /// 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0006378 // mRNA polyadenylation // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006413 // translational initiation // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045727 // positive regulation of translation // traceable author statement /// 0048255 // mRNA stabilization // traceable author statement /// 2000623 // negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0010494 // cytoplasmic stress granule // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008143 // poly(A) RNA binding // inferred from direct assay /// 0008143 // poly(A) RNA binding // traceable author statement /// 0008494 // translation activator activity // traceable author statement","chr8:101715142-101734291 (-) // 96.44 // q22.3"]
["11761508_at",6.703082,8.720737,7.630714,7.1752305,6.4685307,9.552104,-0.1425972,0.23702836,0.04439664,-0.0443964,-0.19398355,0.368397,0.9958209,0.98902684,1.0020378,0.00293688,1.0020378,"up","FGF7",2252,"0001541 // ovarian follicle development // inferred from electronic annotation /// 0006656 // phosphatidylcholine biosynthetic process // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from genetic interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008544 // epidermis development // traceable author statement /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0009611 // response to wounding // traceable author statement /// 0010463 // mesenchymal cell proliferation // inferred from direct assay /// 0010838 // positive regulation of keratinocyte proliferation // inferred from direct assay /// 0030324 // lung development // inferred from electronic annotation /// 0031069 // hair follicle morphogenesis // inferred from electronic annotation /// 0031532 // actin cytoskeleton reorganization // inferred from direct assay /// 0034394 // protein localization at cell surface // inferred from direct assay /// 0042060 // wound healing // inferred from electronic annotation /// 0043129 // surfactant homeostasis // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from direct assay /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0050918 // positive chemotaxis // inferred from direct assay /// 0051549 // positive regulation of keratinocyte migration // inferred from direct assay /// 0051781 // positive regulation of cell division // inferred from electronic annotation /// 0060445 // branching involved in salivary gland morphogenesis // inferred from electronic annotation /// 0060501 // positive regulation of epithelial cell proliferation involved in lung morphogenesis // inferred from direct assay /// 0060665 // regulation of branching involved in salivary gland morphogenesis by mesenchymal-epithelial signaling // inferred from electronic annotation /// 0061033 // secretion by lung epithelial cell involved in lung growth // inferred from direct assay","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation","0005111 // type 2 fibroblast growth factor receptor binding // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation /// 0008083 // growth factor activity // traceable author statement /// 0008201 // heparin binding // inferred from electronic annotation /// 0042056 // chemoattractant activity // inferred from direct assay","chr15:49715438-49717708 (+) // 93.41 // q21.2"]
["11738013_a_at",29.011566,31.685694,31.463804,31.252289,34.858288,31.757126,-0.12213421,0.005069256,-0.005069256,-0.014800549,0.1427393,0.008317947,0.5680364,0.24873357,-1.061519,-0.08613023,1.061519,"down","CCDC7",221016,"","","","chr10:32735013-32863488 (+) // 92.45 // p11.22"]
["11723623_s_at",125.63561,137.47772,133.15106,127.047356,137.37561,143.9756,-0.10634899,0.023602962,-0.022531033,-0.090229034,0.022531033,0.09022999,0.8008208,0.54760814,-1.0299705,-0.042603053,1.0299705,"down","TRIM21",6737,"0000209 // protein polyubiquitination // inferred from direct assay /// 0006513 // protein monoubiquitination // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0031648 // protein destabilization // inferred from mutant phenotype /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0045787 // positive regulation of cell cycle // inferred from mutant phenotype /// 0051865 // protein autoubiquitination // inferred from direct assay /// 0070206 // protein trimerization // inferred from direct assay /// 0090086 // negative regulation of protein deubiquitination // inferred from mutant phenotype","0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0019005 // SCF ubiquitin ligase complex // inferred from direct assay /// 0030529 // ribonucleoprotein complex // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:4406131-4411690 (-) // 92.27 // p15.4"]
["11723315_a_at",57.72494,62.105877,66.79764,59.009525,63.722965,64.457794,-0.12407637,-0.018541813,0.08652592,-0.0923233,0.018541813,0.03508377,0.97924626,0.94032305,-1.0040271,-0.0057982504,1.0040271,"down","CAPN3",825,"0001896 // autolysis // inferred from electronic annotation /// 0006461 // protein complex assembly // inferred from electronic annotation /// 0006461 // protein complex assembly // inferred from sequence or structural similarity /// 0006508 // proteolysis // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007517 // muscle organ development // traceable author statement /// 0014718 // positive regulation of satellite cell activation involved in skeletal muscle regeneration // inferred from electronic annotation /// 0014718 // positive regulation of satellite cell activation involved in skeletal muscle regeneration // inferred from sequence or structural similarity /// 0014850 // response to muscle activity // inferred from sequence or structural similarity /// 0030239 // myofibril assembly // inferred from sequence or structural similarity /// 0030239 // myofibril assembly // traceable author statement /// 0030239 // myofibril assembly // inferred from electronic annotation /// 0033234 // negative regulation of protein sumoylation // inferred from direct assay /// 0042493 // response to drug // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043122 // regulation of I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0043122 // regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype /// 0045214 // sarcomere organization // inferred from electronic annotation /// 0045214 // sarcomere organization // inferred from sequence or structural similarity /// 0045661 // regulation of myoblast differentiation // inferred from electronic annotation /// 0045862 // positive regulation of proteolysis // inferred from electronic annotation /// 0045862 // positive regulation of proteolysis // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0046716 // muscle cell homeostasis // traceable author statement /// 0050790 // regulation of catalytic activity // inferred from direct assay /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from electronic annotation /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0051281 // positive regulation of release of sequestered calcium ion into cytosol // inferred from electronic annotation /// 0051281 // positive regulation of release of sequestered calcium ion into cytosol // inferred from sequence or structural similarity /// 0051592 // response to calcium ion // inferred from sequence or structural similarity /// 0051592 // response to calcium ion // inferred from electronic annotation /// 0061061 // muscle structure development // inferred from sequence or structural similarity /// 0061061 // muscle structure development // inferred from electronic annotation /// 0070315 // G1 to G0 transition involved in cell differentiation // inferred from electronic annotation /// 0071277 // cellular response to calcium ion // inferred from electronic annotation /// 0071277 // cellular response to calcium ion // inferred from sequence or structural similarity /// 0071472 // cellular response to salt stress // inferred from electronic annotation /// 0071472 // cellular response to salt stress // inferred from sequence or structural similarity /// 0072657 // protein localization in membrane // inferred from electronic annotation /// 0072657 // protein localization in membrane // inferred from sequence or structural similarity /// 0097264 // self proteolysis // inferred from direct assay","0005622 // intracellular // traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0030016 // myofibril // inferred from sequence or structural similarity /// 0030018 // Z disc // inferred from sequence or structural similarity /// 0030315 // T-tubule // inferred from sequence or structural similarity /// 0043234 // protein complex // inferred from electronic annotation /// 0043234 // protein complex // inferred from sequence or structural similarity","0003824 // catalytic activity // inferred from direct assay /// 0004198 // calcium-dependent cysteine-type endopeptidase activity // inferred from electronic annotation /// 0004198 // calcium-dependent cysteine-type endopeptidase activity // inferred from sequence or structural similarity /// 0004198 // calcium-dependent cysteine-type endopeptidase activity // traceable author statement /// 0004871 // signal transducer activity // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0008233 // peptidase activity // inferred from direct assay /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // traceable author statement /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0008307 // structural constituent of muscle // inferred from electronic annotation /// 0008307 // structural constituent of muscle // inferred from sequence or structural similarity /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0031402 // sodium ion binding // inferred from electronic annotation /// 0031402 // sodium ion binding // inferred from sequence or structural similarity /// 0031432 // titin binding // inferred from physical interaction /// 0032947 // protein complex scaffold // inferred from electronic annotation /// 0032947 // protein complex scaffold // inferred from sequence or structural similarity /// 0055103 // ligase regulator activity // inferred from direct assay","chr15:42694587-42704513 (+) // 96.51 // q15.1"]
["11749364_a_at",430.4075,426.5963,416.51752,423.7641,413.55722,420.12753,0.028658867,0.015827179,-0.018667221,0.006217003,-0.028957367,-0.006217003,0.6676729,0.3553278,1.0127364,0.018258767,1.0127364,"up","SAP30BP",29115,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr17:73663435-73702781 (+) // 95.45 // q25.1"]
["11733852_at",13.309118,12.166503,14.739373,14.5296545,15.754782,14.739373,-0.1369226,-0.26642323,0.010337353,-0.010337353,0.10645199,0.010337353,0.4153218,0.13039593,-1.1223221,-0.16648676,1.1223221,"down","EGLN3",112399,"0001666 // response to hypoxia // inferred from expression pattern /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from expression pattern /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from expression pattern /// 0018126 // protein hydroxylation // inferred from direct assay /// 0042127 // regulation of cell proliferation // inferred from expression pattern /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043523 // regulation of neuron apoptotic process // inferred from sequence or structural similarity /// 0043523 // regulation of neuron apoptotic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005506 // iron ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from electronic annotation /// 0031418 // L-ascorbic acid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:34393420-34420295 (-) // 88.82 // q13.1"]
["11740767_at",42.243088,55.057438,45.223045,55.55262,46.569305,70.17898,-0.26144314,0.12077904,-0.16310024,0.13369656,-0.12077904,0.470881,0.5915941,0.27180415,-1.199573,-0.262521,1.199573,"down","CCDC73",493860,"","","","chr11:32623625-32816203 (-) // 99.73 // p13"]
["11722543_at",262.273,239.44621,294.9617,241.83577,273.841,265.02417,-0.0075273514,-0.13889503,0.16193104,-0.12456894,0.05474186,0.0075273514,0.93076575,0.8123205,1.0181401,0.025936063,1.0181401,"up","TRPC1",7220,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // traceable author statement /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0051281 // positive regulation of release of sequestered calcium ion into cytosol // inferred from direct assay /// 0051480 // cytosolic calcium ion homeostasis // inferred from direct assay /// 0051592 // response to calcium ion // inferred from direct assay /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070588 // calcium ion transmembrane transport // traceable author statement /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // non-traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005261 // cation channel activity // not recorded /// 0005262 // calcium channel activity // traceable author statement /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015279 // store-operated calcium channel activity // traceable author statement /// 0044325 // ion channel binding // inferred from physical interaction /// 0070679 // inositol 1,4,5 trisphosphate binding // inferred from direct assay","chr3:142442901-142526730 (+) // 95.51 // q23"]
["11718025_at",26.27457,30.84502,25.391129,23.186712,21.373896,17.7221,0.11485577,0.34622622,0.065513134,-0.065513134,-0.18296146,-0.45326185,0.24706313,0.046478827,1.3281738,0.40944389,1.3281738,"up","IL1R1",3554,"0006955 // immune response // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0030728 // ovulation // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation /// 0070498 // interleukin-1-mediated signaling pathway // inferred from direct assay /// 0070498 // interleukin-1-mediated signaling pathway // traceable author statement /// 0070498 // interleukin-1-mediated signaling pathway // inferred from electronic annotation /// 0070555 // response to interleukin-1 // inferred from direct assay /// 0071731 // response to nitric oxide // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031224 // intrinsic to membrane // inferred from electronic annotation","0002020 // protease binding // inferred from electronic annotation /// 0004871 // signal transducer activity // traceable author statement /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004908 // interleukin-1 receptor activity // inferred from direct assay /// 0004908 // interleukin-1 receptor activity // inferred from electronic annotation /// 0004908 // interleukin-1 receptor activity // traceable author statement /// 0004909 // interleukin-1, Type I, activating receptor activity // inferred from electronic annotation /// 0004909 // interleukin-1, Type I, activating receptor activity // traceable author statement /// 0005161 // platelet-derived growth factor receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction","chr2:102721033-102796334 (+) // 93.64 // q12.1"]
["11735336_at",20.750269,24.060726,23.265013,21.421698,22.383402,29.208033,-0.13716555,0.076384544,0.027866364,-0.09122276,-0.027866364,0.35606956,0.82511544,0.59036803,-1.0643444,-0.08996506,1.0643444,"down","CPLX4",339302,"0006810 // transport // inferred from electronic annotation /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0046928 // regulation of neurotransmitter secretion // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0000149 // SNARE binding // inferred from electronic annotation /// 0019905 // syntaxin binding // inferred from electronic annotation","chr18:56962637-56985881 (-) // 92.08 // q21.32"]
["11745176_a_at",608.829,551.04913,592.25726,471.85828,456.8821,461.5453,0.25576973,0.11191368,0.21595669,-0.11191368,-0.15844536,-0.14379501,0.05302809,0.0017915904,1.259279,0.33259797,1.259279,"up","TPD52L2",7165,"0042127 // regulation of cell proliferation // traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay","chr20:62496599-62521544 (+) // 97.89 // q13.33"]
["11763262_at",23.122557,25.742027,30.066862,28.088009,20.771069,31.12571,-0.2177391,-0.06291437,0.16113424,0.06291437,-0.37246466,0.21106672,0.99143094,0.97457504,-1.0048721,-0.0070118634,1.0048721,"down","DCN",1634,"0001822 // kidney development // inferred from electronic annotation /// 0001890 // placenta development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009887 // organ morphogenesis // traceable author statement /// 0019800 // peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005589 // collagen type VI // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity","0005518 // collagen binding // inferred from electronic annotation /// 0005539 // glycosaminoglycan binding // inferred from electronic annotation /// 0047485 // protein N-terminus binding // inferred from electronic annotation /// 0050840 // extracellular matrix binding // inferred from electronic annotation","chr12:91566304-91573225 (-) // 92.27 // q21.33"]
["11727419_x_at",5175.2466,4745.747,4573.6855,5370.961,5212.4497,5106.1353,0.00969696,-0.11529541,-0.16857338,0.06324959,0.020030975,-0.009697914,0.38415745,0.11137805,-1.0836645,-0.11591822,1.0836645,"down","CNBP",7555,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from sequence or structural similarity /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003727 // single-stranded RNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:128886658-128902823 (-) // 71.45 // q21.3"]
["11748389_s_at",270.6642,227.64557,235.19214,252.33467,217.91302,238.45929,0.19271278,-0.057002544,-0.0099515915,0.09154749,-0.120038986,0.009952068,0.8569472,0.65027374,1.0339019,0.048099346,1.0339019,"up","GON4L /// YY1AP1","54856 /// 55249","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:155630240-155658823 (-) // 92.99 // q22"]
["11728412_x_at",68.68499,83.11102,77.39999,72.29871,80.13745,81.36784,-0.1974101,0.07763481,-0.025071621,-0.12343454,0.025071621,0.047053814,0.9103378,0.76272386,-1.021847,-0.031179212,1.021847,"down","CASZ1",54897,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:10696667-10856707 (-) // 92.73 // p36.22"]
["11739454_x_at",8.443076,7.6335163,7.85496,8.207628,8.269494,8.764075,0.035386562,-0.110034466,-0.068778515,-0.00541687,0.00541687,0.08921957,0.5294386,0.21439067,-1.0552236,-0.07754871,1.0552236,"down","C1QTNF9 /// SPATA13","221178 /// 338872","0016477 // cell migration // inferred from mutant phenotype /// 0030032 // lamellipodium assembly // inferred from mutant phenotype /// 0030334 // regulation of cell migration // inferred from mutant phenotype /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0046847 // filopodium assembly // inferred from mutant phenotype","0005576 // extracellular region // inferred from electronic annotation /// 0005581 // collagen // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from direct assay /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030175 // filopodium // inferred from direct assay /// 0030175 // filopodium // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from direct assay /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from mutant phenotype /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005179 // hormone activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0030676 // Rac guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0030676 // Rac guanyl-nucleotide exchange factor activity // inferred from mutant phenotype","chr13:24889029-24896668 (+) // 82.11 // q12.12"]
["11730788_a_at",5569.535,4992.162,4947.565,5687.923,5174.0664,5482.003,0.06455517,-0.09333801,-0.10628319,0.09489918,-0.041703224,0.04170227,0.6389325,0.32138714,-1.05457,-0.07665481,1.05457,"down","APLP2",334,"0001967 // suckling behavior // inferred from electronic annotation /// 0006878 // cellular copper ion homeostasis // inferred from electronic annotation /// 0007176 // regulation of epidermal growth factor-activated receptor activity // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // non-traceable author statement /// 0007617 // mating behavior // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0030901 // midbrain development // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0046914 // transition metal ion binding // inferred from electronic annotation","chr11:129939715-130014700 (+) // 96.31 // q24.3"]
["11720518_a_at",461.82455,326.80502,342.88983,436.38995,307.13147,309.60303,0.46425724,-0.03465748,0.03465748,0.3825302,-0.12423134,-0.11266804,0.86490697,0.66634345,1.0763959,0.10620876,1.0763959,"up","TACC2",10579,"0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from electronic annotation /// 0022027 // interkinetic nuclear migration // inferred from electronic annotation /// 0030953 // astral microtubule organization // inferred from electronic annotation /// 0032886 // regulation of microtubule-based process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0019904 // protein domain specific binding // inferred from electronic annotation /// 0035257 // nuclear hormone receptor binding // inferred from direct assay","chr10:123781450-124014057 (+) // 96.18 // q26.13"]
["11758376_s_at",33.319454,33.331768,30.210094,30.789417,30.430122,31.335924,0.10123873,0.10177183,-0.04009533,-0.012691498,-0.029625893,0.012691498,0.5784668,0.25857973,1.0454909,0.06418045,1.0454909,"up","C7orf63",79846,"","","","chr7:89939683-89940371 (+) // 53.57 // q21.13"]
["11721869_at",292.05627,269.18896,275.65063,262.42804,240.7385,260.38623,0.13597584,0.018348694,0.052570343,-0.018348694,-0.14280367,-0.02961731,0.29637125,0.06639124,1.0962332,0.1325548,1.0962332,"up","HIF1AN",55662,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0036138 // peptidyl-histidine hydroxylation // inferred from direct assay /// 0042264 // peptidyl-aspartic acid hydroxylation // inferred from direct assay /// 0042265 // peptidyl-asparagine hydroxylation // inferred from direct assay /// 0042265 // peptidyl-asparagine hydroxylation // inferred from mutant phenotype /// 0045663 // positive regulation of myoblast differentiation // inferred from direct assay /// 0045746 // negative regulation of Notch signaling pathway // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0061428 // negative regulation of transcription from RNA polymerase II promoter in response to hypoxia // inferred from direct assay /// 2001214 // positive regulation of vasculogenesis // non-traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005112 // Notch binding // inferred from physical interaction /// 0005506 // iron ion binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from electronic annotation /// 0019826 // oxygen sensor activity // non-traceable author statement /// 0031406 // carboxylic acid binding // inferred from direct assay /// 0036139 // peptidyl-histidine dioxygenase activity // inferred from direct assay /// 0036140 // peptidyl-asparagine 3-dioxygenase activity // inferred from direct assay /// 0036140 // peptidyl-asparagine 3-dioxygenase activity // inferred from mutant phenotype /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048037 // cofactor binding // inferred from direct assay /// 0051059 // NF-kappaB binding // inferred from physical interaction /// 0071532 // ankyrin repeat binding // inferred from physical interaction","chr10:102295615-102313681 (+) // 86.41 // q24.31"]
["11720067_a_at",91.37987,100.32608,107.37571,63.535057,76.54246,75.24418,0.12780762,0.26255608,0.36052704,-0.39651585,-0.1278081,-0.15248919,0.12682652,0.012045059,1.3907868,0.47590125,1.3907868,"up","APH1B",83464,"0006915 // apoptotic process // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007220 // Notch receptor processing // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0016485 // protein processing // inferred from direct assay /// 0016485 // protein processing // inferred from electronic annotation /// 0031293 // membrane protein intracellular domain proteolysis // traceable author statement /// 0043085 // positive regulation of catalytic activity // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from direct assay","chr15:63569717-63601318 (+) // 91.93 // q22.2"]
["11720038_at",136.15103,127.475845,124.62648,147.09413,144.8895,126.71806,0.04749155,-0.047492027,-0.08010578,0.15902328,0.1372366,-0.05609417,0.5639816,0.24468394,-1.0768052,-0.10675733,1.0768052,"down","VTA1",51534,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0016197 // endosomal transport // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","","chr6:142468218-142542083 (+) // 85.62 // q24.1"]
["11733855_a_at",143.3007,142.5562,134.23036,143.13919,144.38954,146.39725,0.0008134842,-0.0067014694,-0.09352112,-0.0008134842,0.011734009,0.031656265,0.5238816,0.20986395,-1.0333498,-0.047328636,1.0333498,"down","APOL1",8542,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from direct assay /// 0006869 // lipid transport // inferred from electronic annotation /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0019835 // cytolysis // inferred from direct assay /// 0031640 // killing of cells of other organism // inferred from direct assay /// 0042157 // lipoprotein metabolic process // inferred from electronic annotation /// 0045087 // innate immune response // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0031224 // intrinsic to membrane // inferred by curator /// 0034361 // very-low-density lipoprotein particle // inferred from direct assay /// 0034364 // high-density lipoprotein particle // inferred from direct assay /// 0034364 // high-density lipoprotein particle // inferred from electronic annotation","0005254 // chloride channel activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from direct assay /// 0008289 // lipid binding // inferred from electronic annotation","chr22:36649116-36663576 (+) // 69.27 // q12.3"]
["11748002_a_at",1291.0922,1171.8285,1148.3572,1223.4275,1110.7719,1106.9375,0.15442562,0.014595032,-0.014595032,0.0767622,-0.06260395,-0.06759262,0.6875131,0.38085943,1.0491978,0.069286674,1.0491978,"up","HPCAL1",3241,"","","0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement","chr2:10508692-10567217 (+) // 99.81 // p25.1"]
["11718248_a_at",63.65809,56.8036,48.648838,67.65183,57.922825,57.485954,0.14167261,-0.022688389,-0.24626589,0.22945786,0.005460739,-0.005461216,0.7245472,0.4313106,-1.0859164,-0.11891304,1.0859164,"down","KIAA0430",9665,"0007126 // meiosis // inferred from electronic annotation /// 0007143 // female meiosis // inferred from sequence or structural similarity /// 0010468 // regulation of gene expression // inferred from sequence or structural similarity /// 0010923 // negative regulation of phosphatase activity // inferred from direct assay /// 0030154 // cell differentiation // inferred from electronic annotation /// 0048477 // oogenesis // inferred from sequence or structural similarity /// 0048477 // oogenesis // inferred from electronic annotation","0005777 // peroxisome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr16:15688243-15733150 (-) // 96.88 // p13.11"]
["11749510_a_at",206.50221,234.99718,229.55692,165.2085,184.61478,197.2653,0.033010006,0.2194953,0.18570423,-0.28885984,-0.12862968,-0.033010006,0.2134702,0.03461765,1.2279369,0.29623637,1.2279369,"up","SAMHD1",25939,"0006955 // immune response // non-traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation /// 0045088 // regulation of innate immune response // inferred from mutant phenotype /// 0051607 // defense response to virus // inferred from mutant phenotype","0005622 // intracellular // non-traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from direct assay /// 0003824 // catalytic activity // inferred from electronic annotation /// 0008081 // phosphoric diester hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:35521053-35580075 (-) // 99.11 // q11.23"]
["11758928_at",378.67828,367.52365,371.65198,392.44855,277.99048,338.8988,0.03507805,-0.008057594,0.008057594,0.08660889,-0.4108591,-0.12504005,0.6438438,0.32697347,1.1184154,0.16145608,1.1184154,"up","NLN",57486,"0006508 // proteolysis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:65018022-65123628 (+) // 81.7 // q12.3"]
["11725876_at",75.17356,83.77654,87.43084,75.17356,90.53243,93.529526,-0.187119,-0.030797958,0.030797958,-0.187119,0.08109045,0.1280775,0.82220495,0.585356,-1.0495149,-0.06972263,1.0495149,"down","GPIHBP1",338328,"0006869 // lipid transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from sequence or structural similarity /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0017038 // protein import // inferred from sequence or structural similarity /// 0017038 // protein import // inferred from electronic annotation /// 0034394 // protein localization at cell surface // inferred from sequence or structural similarity /// 0034394 // protein localization at cell surface // inferred from electronic annotation /// 0042632 // cholesterol homeostasis // inferred from sequence or structural similarity /// 0042632 // cholesterol homeostasis // inferred from electronic annotation /// 0045056 // transcytosis // inferred from sequence or structural similarity /// 0045056 // transcytosis // inferred from electronic annotation /// 0050821 // protein stabilization // inferred from sequence or structural similarity /// 0050821 // protein stabilization // inferred from electronic annotation /// 0051006 // positive regulation of lipoprotein lipase activity // inferred from mutant phenotype /// 0051006 // positive regulation of lipoprotein lipase activity // inferred from electronic annotation /// 0070328 // triglyceride homeostasis // inferred from mutant phenotype /// 0070328 // triglyceride homeostasis // inferred from electronic annotation /// 0071503 // response to heparin // inferred from mutant phenotype /// 0090321 // positive regulation of chylomicron remnant clearance // inferred from sequence or structural similarity /// 0090321 // positive regulation of chylomicron remnant clearance // inferred from electronic annotation","0005622 // intracellular // inferred from sequence or structural similarity /// 0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from sequence or structural similarity /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from sequence or structural similarity /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0031362 // anchored to external side of plasma membrane // inferred from direct assay /// 0034364 // high-density lipoprotein particle // inferred from electronic annotation /// 0046658 // anchored to plasma membrane // inferred from electronic annotation","0008035 // high-density lipoprotein particle binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation /// 0008320 // protein transmembrane transporter activity // inferred from sequence or structural similarity /// 0008320 // protein transmembrane transporter activity // inferred from electronic annotation /// 0034185 // apolipoprotein binding // inferred from physical interaction /// 0035473 // lipase binding // inferred from physical interaction /// 0035473 // lipase binding // inferred from electronic annotation /// 0035478 // chylomicron binding // inferred from direct assay /// 0035478 // chylomicron binding // inferred from electronic annotation /// 0071813 // lipoprotein particle binding // inferred from direct assay /// 0071813 // lipoprotein particle binding // inferred from electronic annotation","chr8:144295067-144299044 (+) // 76.09 // q24.3"]
["11747313_a_at",725.60004,631.6487,627.44885,738.15137,648.112,650.85626,0.1598835,-0.040168762,-0.049793243,0.18462563,-0.003047943,0.003047943,0.8809309,0.6989922,-1.0268565,-0.03823464,1.0268565,"down","OXA1L",5018,"0006461 // protein complex assembly // non-traceable author statement /// 0009060 // aerobic respiration // inferred from mutant phenotype /// 0009060 // aerobic respiration // non-traceable author statement /// 0032780 // negative regulation of ATPase activity // inferred from mutant phenotype /// 0032981 // mitochondrial respiratory chain complex I assembly // inferred from mutant phenotype /// 0033615 // mitochondrial proton-transporting ATP synthase complex assembly // inferred from mutant phenotype /// 0051205 // protein insertion into membrane // inferred from electronic annotation /// 0051262 // protein tetramerization // inferred from direct assay /// 0051354 // negative regulation of oxidoreductase activity // inferred from mutant phenotype /// 0055114 // oxidation-reduction process // non-traceable author statement /// 0097031 // mitochondrial respiratory chain complex I biogenesis // inferred from mutant phenotype","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from mutant phenotype /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005746 // mitochondrial respiratory chain // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from direct assay /// 0032592 // integral to mitochondrial membrane // inferred from direct assay /// 0043234 // protein complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043022 // ribosome binding // inferred from direct assay","chr14:23235883-23238461 (+) // 54.89 // q11.2"]
["11737218_x_at",46.992233,43.44385,34.264187,30.508423,30.80553,30.665798,0.5324769,0.41920662,0.076756,-0.09073782,-0.076756,-0.083314896,0.21682474,0.0358219,1.3438909,0.426416,1.3438909,"up","HHLA3",11147,"","","0005515 // protein binding // inferred from physical interaction","chr1:70820490-70820893 (+) // 30.17 // p31.1"]
["11764044_a_at",75.761696,93.8298,87.05437,76.04604,85.038864,94.038345,-0.18355083,0.1250267,0.016897202,-0.17814636,-0.016896725,0.12822962,0.9830313,0.95026815,1.0058362,0.008395451,1.0058362,"up","ABTB1",80325,"0006412 // translation // inferred from electronic annotation /// 0006414 // translational elongation // inferred from electronic annotation","0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0003746 // translation elongation factor activity // inferred from electronic annotation","chr3:127398206-127398908 (+) // 72.42 // q21.3"]
["11744697_x_at",387.78534,453.53958,439.11057,379.83652,414.8984,403.08136,-0.07665634,0.14931393,0.102669716,-0.10653591,0.020843506,-0.020843506,0.6167483,0.29703057,1.0672916,0.09395442,1.0672916,"up","CCDC90B",60492,"","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:82970340-82997430 (-) // 71.65 // q14.1"]
["11745587_x_at",129.0562,132.28094,130.60333,118.7774,126.5332,122.556206,0.014241695,0.049847603,0.03143406,-0.10549736,-0.014241695,-0.06031418,0.20375648,0.031424575,1.0657425,0.09185889,1.0657425,"up","TUBD1",51174,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0007017 // microtubule-based process // inferred from electronic annotation /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0051258 // protein polymerization // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005814 // centriole // inferred from electronic annotation /// 0005814 // centriole // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr17:57937394-57970219 (-) // 87.81 // q23.1"]
["11763009_at",20.017265,15.665424,18.087145,17.286995,15.463137,12.766344,0.28260946,-0.0710516,0.13632917,0.0710516,-0.0898025,-0.3662901,0.5241906,0.21014318,1.1845256,0.24430938,1.1845256,"up",0.13632917,"","","","","0005216 // ion channel activity // inferred from electronic annotation"]
["11739350_a_at",6.526638,6.887841,6.7081943,6.668681,6.872778,7.2750106,-0.057068825,0.020642996,-0.017484426,-0.026007414,0.017484426,0.09954047,0.6424716,0.3251524,-1.0340524,-0.048309255,1.0340524,"down","AMOT",154796,"0001570 // vasculogenesis // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001702 // gastrulation with mouth forming second // inferred from electronic annotation /// 0003365 // establishment of cell polarity involved in ameboidal cell migration // inferred from electronic annotation /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007043 // cell-cell junction assembly // traceable author statement /// 0016525 // negative regulation of angiogenesis // inferred from direct assay /// 0030036 // actin cytoskeleton organization // traceable author statement /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030334 // regulation of cell migration // inferred from direct assay /// 0034260 // negative regulation of GTPase activity // inferred from electronic annotation /// 0034613 // cellular protein localization // inferred from direct assay /// 0034613 // cellular protein localization // inferred from electronic annotation /// 0035329 // hippo signaling cascade // inferred from genetic interaction /// 0035329 // hippo signaling cascade // traceable author statement /// 0040019 // positive regulation of embryonic development // inferred from electronic annotation /// 0042074 // cell migration involved in gastrulation // inferred from electronic annotation /// 0043116 // negative regulation of vascular permeability // inferred from direct assay /// 0043534 // blood vessel endothelial cell migration // inferred from electronic annotation /// 0043536 // positive regulation of blood vessel endothelial cell migration // inferred from direct assay /// 0045793 // positive regulation of cell size // traceable author statement /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation /// 0051496 // positive regulation of stress fiber assembly // traceable author statement","0001725 // stress fiber // inferred from direct assay /// 0001726 // ruffle // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005884 // actin filament // inferred from direct assay /// 0005923 // tight junction // inferred from direct assay /// 0005923 // tight junction // inferred from electronic annotation /// 0008180 // signalosome // inferred from direct assay /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0016021 // integral to membrane // inferred from direct assay /// 0030027 // lamellipodium // inferred from direct assay /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from direct assay /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0004872 // receptor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0043532 // angiostatin binding // inferred from direct assay","chrX:112018105-112068356 (-) // 89.21 // q23"]
["11744758_a_at",211.60645,242.68686,254.43784,272.49915,230.69928,262.49466,-0.23182154,-0.03410864,0.03410864,0.13304663,-0.10719204,0.079082966,0.6691503,0.35715762,-1.080915,-0.11225304,1.080915,"down","PSORS1C1",170679,"","","","chr6:31106157-31107867 (+) // 90.9 // p21.33"]
["11728741_at",561.60254,595.79407,578.4614,634.2478,588.3898,543.5049,-0.0549469,0.030317307,-0.012275696,0.120550156,0.012275696,-0.10220337,0.9094823,0.76014864,-1.0157245,-0.022509202,1.0157245,"down","COQ3",51805,"0006071 // glycerol metabolic process // inferred from genetic interaction /// 0006744 // ubiquinone biosynthetic process // inferred from electronic annotation /// 0006744 // ubiquinone biosynthetic process // inferred from genetic interaction /// 0008152 // metabolic process // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation","0005739 // mitochondrion // inferred from reviewed computational analysis /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0004395 // hexaprenyldihydroxybenzoate methyltransferase activity // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008171 // O-methyltransferase activity // traceable author statement /// 0008425 // 2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity // inferred from electronic annotation /// 0008689 // 3-demethylubiquinone-9 3-O-methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr6:99817276-99842080 (-) // 92.37 // q16.2"]
["11758250_s_at",318.4692,301.0559,326.40518,329.73666,368.10062,331.5924,-0.042835236,-0.123957634,-0.0073251724,0.0073251724,0.16611099,0.015421867,0.40399966,0.12322175,-1.0874823,-0.12099196,1.0874823,"down","FBXL3",26224,"0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // non-traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0031146 // SCF-dependent proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0042752 // regulation of circadian rhythm // inferred from mutant phenotype /// 0042752 // regulation of circadian rhythm // inferred from electronic annotation /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0048511 // rhythmic process // inferred from electronic annotation","0000151 // ubiquitin ligase complex // non-traceable author statement /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0019005 // SCF ubiquitin ligase complex // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // non-traceable author statement /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr13:77580302-77580889 (-) // 100.0 // q22.3"]
["11734761_a_at",35.034767,39.051777,39.115387,38.649555,37.96115,42.349304,-0.14913273,0.0074682236,0.00981617,-0.0074682236,-0.033396244,0.12441826,0.6823884,0.37383085,-1.0510277,-0.07180063,1.0510277,"down","HIP1",3092,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0008219 // cell death // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from direct assay /// 0048260 // positive regulation of receptor-mediated endocytosis // inferred from mutant phenotype /// 0048260 // positive regulation of receptor-mediated endocytosis // inferred from electronic annotation /// 0048268 // clathrin coat assembly // inferred from direct assay","0005624 // membrane fraction // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005856 // cytoskeleton // traceable author statement /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from direct assay /// 0030665 // clathrin coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003779 // actin binding // inferred from electronic annotation /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0030276 // clathrin binding // inferred from direct assay /// 0035091 // phosphatidylinositol binding // inferred from direct assay","chr7:75162618-75368283 (-) // 86.45 // q11.23"]
["11736716_s_at",7.0907383,7.3327284,6.551441,6.2425227,6.7809124,7.7089477,0.03222823,0.08064246,-0.08189535,-0.15157843,-0.03222823,0.15282631,0.94515395,0.84768844,1.0144178,0.02065192,1.0144178,"up","TMPRSS11E",28983,"0006508 // proteolysis // inferred from sequence or structural similarity /// 0006508 // proteolysis // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from sequence or structural similarity /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from sequence or structural similarity /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr4:69313166-69363322 (+) // 99.95 // q13.2"]
["11717672_s_at",9.071269,9.598223,10.375381,8.747878,9.539206,10.57688,-0.07701349,0.004449129,0.11677456,-0.129385,-0.0044488907,0.14452434,0.9691231,0.91391593,1.0077748,0.011173329,1.0077748,"up","ENPP2",5168,"0006796 // phosphate-containing compound metabolic process // traceable author statement /// 0006928 // cellular component movement // traceable author statement /// 0006935 // chemotaxis // non-traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0030334 // regulation of cell migration // inferred from direct assay /// 0034638 // phosphatidylcholine catabolic process // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from sequence or structural similarity /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004528 // phosphodiesterase I activity // traceable author statement /// 0004551 // nucleotide diphosphatase activity // traceable author statement /// 0004622 // lysophospholipase activity // inferred from direct assay /// 0005044 // scavenger receptor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0008134 // transcription factor binding // traceable author statement /// 0008270 // zinc ion binding // inferred from sequence or structural similarity /// 0016787 // hydrolase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030247 // polysaccharide binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047391 // alkylglycerophosphoethanolamine phosphodiesterase activity // inferred from electronic annotation","chr8:120569314-120651106 (-) // 99.85 // q24.12"]
["11758636_s_at",6.862215,7.4068384,6.847159,7.343979,7.749395,7.1488853,-0.0784657,0.031717777,-0.08163452,0.019421816,0.09694362,-0.019421816,0.52625835,0.21176697,-1.0534405,-0.07510877,1.0534405,"down","ASPN",54829,"0030282 // bone mineralization // inferred from direct assay /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from direct assay /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway // inferred from electronic annotation /// 0031214 // biomineral tissue development // inferred from electronic annotation /// 0070171 // negative regulation of tooth mineralization // inferred from sequence or structural similarity /// 0070171 // negative regulation of tooth mineralization // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from direct assay /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay","0005509 // calcium ion binding // inferred from direct assay","chr9:95218490-95218826 (-) // 98.82 // q22.31"]
["11716824_s_at",8.112265,9.412368,11.459866,8.6465845,11.65289,10.269597,-0.277328,-0.06287503,0.22108507,-0.18530273,0.24518299,0.062874794,0.87873083,0.694321,-1.0574756,-0.08062433,1.0574756,"down","BDH2",56898,"0006635 // fatty acid beta-oxidation // inferred from direct assay /// 0008152 // metabolic process // inferred from electronic annotation /// 0009239 // enterobactin biosynthetic process // inferred from electronic annotation /// 0019290 // siderophore biosynthetic process // inferred from sequence or structural similarity /// 0019290 // siderophore biosynthetic process // inferred from electronic annotation /// 0042168 // heme metabolic process // inferred from sequence or structural similarity /// 0055072 // iron ion homeostasis // inferred from sequence or structural similarity /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003858 // 3-hydroxybutyrate dehydrogenase activity // inferred from direct assay /// 0003858 // 3-hydroxybutyrate dehydrogenase activity // inferred from electronic annotation /// 0008667 // 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016628 // oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor // inferred from sequence or structural similarity /// 0016628 // oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0051287 // NAD binding // inferred from direct assay","chr4:103998764-104021064 (-) // 75.83 // q24"]
["11757145_x_at",18.33148,34.009396,30.729546,30.577421,28.651552,30.031513,-0.7251487,0.16646147,0.020154476,0.012994766,-0.08085871,-0.012994766,0.8361204,0.61171615,-1.1115385,-0.15255795,1.1115385,"down","SNORA13",654322,"","","","chr5:111497181-111497314 (+) // 100.0 // q22.1"]
["11715371_a_at",2576.8457,1879.9235,1720.8551,2216.3071,1483.5283,1620.191,0.5187063,0.06377411,-0.06377411,0.3012581,-0.27786732,-0.15073586,0.72846687,0.43634272,1.160986,0.21535051,1.160986,"up","UBA1",7317,"0006464 // cellular protein modification process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008641 // small protein activating enzyme activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation","chrX:47052901-47074527 (+) // 85.62 // p11.23"]
["11738502_s_at",9.307928,10.142126,9.528996,10.491462,9.198535,10.74285,-0.078846216,0.044981956,-0.044981718,0.09383798,-0.095901966,0.12799883,0.7275981,0.43541843,-1.0484517,-0.06826035,1.0484517,"down","OR2L3 /// OR2L8","391190 /// 391192","0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr1:248223950-248224975 (+) // 100.0 // q44 /// chr1:248112126-248113151 (+) // 95.9 // q44"]
["11750087_a_at",15.698621,22.181732,19.172852,19.553686,21.445593,18.105907,-0.3026147,0.19611931,-0.014187813,0.014187813,0.14742851,-0.09679222,0.8911334,0.7202675,-1.0437931,-0.061835743,1.0437931,"down","CALCB",797,"0006874 // cellular calcium ion homeostasis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0042311 // vasodilation // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005625 // soluble fraction // traceable author statement","0005179 // hormone activity // inferred from electronic annotation /// 0005184 // neuropeptide hormone activity // traceable author statement","chr11:15095107-15099018 (+) // 77.06 // p15.2"]
["11738820_a_at",19.978897,23.578781,24.241991,21.587854,29.025444,26.037523,-0.25902176,-0.020009518,0.020009518,-0.14727879,0.2798195,0.123093605,0.6399822,0.32256296,-1.1262695,-0.17155203,1.1262695,"down","PCDHA2",56146,"0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr5:140174443-140177062 (+) // 99.96 // q31.3"]
["11735106_at",28.414766,33.93483,36.825783,25.256014,35.54367,36.835293,-0.28953886,-0.033412933,0.08453655,-0.45955276,0.033412933,0.08490896,0.95627004,0.8757532,1.0240399,0.034271877,1.0240399,"up","CD40LG",959,"0002839 // positive regulation of immune response to tumor cell // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from direct assay /// 0006954 // inflammatory response // inferred from direct assay /// 0006955 // immune response // inferred from electronic annotation /// 0007159 // leukocyte cell-cell adhesion // non-traceable author statement /// 0030168 // platelet activation // inferred from direct assay /// 0030183 // B cell differentiation // inferred from electronic annotation /// 0030890 // positive regulation of B cell proliferation // inferred from electronic annotation /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0032733 // positive regulation of interleukin-10 production // inferred from electronic annotation /// 0032735 // positive regulation of interleukin-12 production // inferred from direct assay /// 0032735 // positive regulation of interleukin-12 production // inferred from electronic annotation /// 0042100 // B cell proliferation // inferred from direct assay /// 0045190 // isotype switching // inferred from sequence or structural similarity /// 0045190 // isotype switching // inferred from electronic annotation /// 0045348 // positive regulation of MHC class II biosynthetic process // inferred from electronic annotation /// 0048305 // immunoglobulin secretion // inferred from electronic annotation /// 0050776 // regulation of immune response // traceable author statement /// 0051023 // regulation of immunoglobulin secretion // inferred from electronic annotation /// 2000353 // positive regulation of endothelial cell apoptotic process // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005625 // soluble fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0005164 // tumor necrosis factor receptor binding // inferred from electronic annotation /// 0005174 // CD40 receptor binding // inferred from physical interaction","chrX:135730236-135742549 (+) // 90.46 // q26.3"]
["11763086_at",29.169462,33.738903,33.550316,34.290604,35.184696,34.412216,-0.22165442,-0.011700153,-0.019786835,0.011700153,0.0488348,0.016807556,0.4974696,0.18890652,-1.0793489,-0.11016132,1.0793489,"down",0.016807556,-0.22165442,-0.011700153,-0.019786835,"C5orf17",439936]
["11751484_x_at",37.91966,40.43212,41.75771,42.63536,42.54897,46.310516,-0.15263748,-0.060081482,-0.013540745,0.016467094,0.013540745,0.1357565,0.3357185,0.085018784,-1.0948056,-0.13067472,1.0948056,"down","BGN",633,"0001974 // blood vessel remodeling // inferred from electronic annotation /// 0019800 // peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0030133 // transport vesicle // inferred from direct assay /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity /// 0031012 // extracellular matrix // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation /// 0044424 // intracellular part // inferred from electronic annotation","0005201 // extracellular matrix structural constituent // non-traceable author statement /// 0005539 // glycosaminoglycan binding // inferred from electronic annotation /// 0050840 // extracellular matrix binding // inferred from electronic annotation","chrX:152760433-152774295 (+) // 98.7 // q28"]
["11721446_a_at",601.6678,522.1548,520.9746,437.80255,410.9536,398.96188,0.33322048,0.12873077,0.12546635,-0.12546635,-0.21677113,-0.25949574,0.10137578,0.0074890214,1.3162044,0.39638358,1.3162044,"up","SNX4",8723,"0006810 // transport // inferred from electronic annotation /// 0006897 // endocytosis // traceable author statement /// 0007154 // cell communication // inferred from electronic annotation /// 0015031 // protein transport // inferred from mutant phenotype /// 0015031 // protein transport // inferred from electronic annotation /// 0032456 // endocytic recycling // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005868 // cytoplasmic dynein complex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from direct assay /// 0031901 // early endosome membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from mutant phenotype /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr3:125165493-125239046 (-) // 93.38 // q21.2"]
["11755761_a_at",12.498731,9.604089,10.735535,8.754516,10.152837,10.542368,0.27274084,-0.10732007,0.05335331,-0.24094129,-0.027158022,0.02715826,0.64378417,0.32665578,1.1120629,0.15323843,1.1120629,"up","FANCM",57697,"0000712 // resolution of meiotic recombination intermediates // inferred from mutant phenotype /// 0006259 // DNA metabolic process // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006281 // DNA repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0031297 // replication fork processing // inferred from mutant phenotype /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0043240 // Fanconi anaemia nuclear complex // inferred from direct assay /// 0071821 // FANCM-MHF complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0004386 // helicase activity // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr14:45623961-45670092 (+) // 92.79 // q21.2"]
["11760667_at",66.078354,62.45043,63.65127,45.481304,68.18906,71.13561,0.026994228,-0.05447197,-0.026993752,-0.51190996,0.07235718,0.13338804,0.8847685,0.70608985,1.0598776,0.08389771,1.0598776,"up","TBXAS1",6916,"0001516 // prostaglandin biosynthetic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006690 // icosanoid metabolic process // traceable author statement /// 0006692 // prostanoid metabolic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0030644 // cellular chloride ion homeostasis // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045907 // positive regulation of vasoconstriction // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004497 // monooxygenase activity // inferred from electronic annotation /// 0004796 // thromboxane-A synthase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:139529047-139613828 (+) // 100.0 // q34"]
["11715534_a_at",292.1113,182.85121,186.64996,232.99663,169.99516,161.9555,0.66101503,-0.014832497,0.014832497,0.33480597,-0.1200099,-0.18990564,0.7608861,0.48384312,1.1583261,0.21204153,1.1583261,"up","LRP1",4035,"0006897 // endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // inferred from electronic annotation /// 0007205 // protein kinase C-activating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0010875 // positive regulation of cholesterol efflux // inferred from sequence or structural similarity /// 0010875 // positive regulation of cholesterol efflux // inferred from electronic annotation /// 0014912 // negative regulation of smooth muscle cell migration // inferred from sequence or structural similarity /// 0014912 // negative regulation of smooth muscle cell migration // inferred from electronic annotation /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from sequence or structural similarity /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0032370 // positive regulation of lipid transport // inferred from sequence or structural similarity /// 0032370 // positive regulation of lipid transport // inferred from electronic annotation /// 0032374 // regulation of cholesterol transport // inferred from sequence or structural similarity /// 0032374 // regulation of cholesterol transport // inferred from electronic annotation /// 0032429 // regulation of phospholipase A2 activity // inferred from sequence or structural similarity /// 0032429 // regulation of phospholipase A2 activity // inferred from electronic annotation /// 0032956 // regulation of actin cytoskeleton organization // inferred from sequence or structural similarity /// 0032956 // regulation of actin cytoskeleton organization // inferred from electronic annotation /// 0035909 // aorta morphogenesis // inferred from sequence or structural similarity /// 0035909 // aorta morphogenesis // inferred from electronic annotation /// 0042157 // lipoprotein metabolic process // inferred from electronic annotation /// 0042953 // lipoprotein transport // non-traceable author statement /// 0043277 // apoptotic cell clearance // inferred from sequence or structural similarity /// 0043277 // apoptotic cell clearance // inferred from electronic annotation /// 0045768 // positive regulation of anti-apoptosis // inferred from electronic annotation /// 0051222 // positive regulation of protein transport // inferred from electronic annotation /// 2000587 // negative regulation of platelet-derived growth factor receptor-beta signaling pathway // inferred from sequence or structural similarity /// 2000587 // negative regulation of platelet-derived growth factor receptor-beta signaling pathway // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from sequence or structural similarity /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0002020 // protease binding // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from direct assay /// 0034185 // apolipoprotein binding // inferred from physical interaction /// 0042954 // lipoprotein transporter activity // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070325 // lipoprotein particle receptor binding // inferred by curator","chr12:57522281-57607142 (+) // 99.36 // q13.3"]
["11740363_a_at",100.26644,96.0562,108.72283,95.18868,108.09207,104.552284,-0.030192852,-0.09208107,0.08662319,-0.10516977,0.07822895,0.030192852,0.9549032,0.8726244,-1.0090289,-0.012967512,1.0090289,"down","PTPN3",5774,"0006470 // protein dephosphorylation // inferred from direct assay /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006470 // protein dephosphorylation // traceable author statement /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from direct assay /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0045930 // negative regulation of mitotic cell cycle // inferred from direct assay /// 0051045 // negative regulation of membrane protein ectodomain proteolysis // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009898 // internal side of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0001784 // phosphotyrosine binding // inferred from physical interaction /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0051117 // ATPase binding // inferred from physical interaction","chr9:112137973-112225734 (-) // 87.82 // q31.3"]
["11721133_at",172.71208,175.91417,168.62956,160.86325,155.05621,167.22292,0.040554523,0.06705713,0.0060424805,-0.06197977,-0.11502266,-0.0060424805,0.2614701,0.051857065,1.0709563,0.09889968,1.0709563,"up","GFPT2",9945,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006002 // fructose 6-phosphate metabolic process // traceable author statement /// 0006048 // UDP-N-acetylglucosamine biosynthetic process // inferred from electronic annotation /// 0006048 // UDP-N-acetylglucosamine biosynthetic process // traceable author statement /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0006541 // glutamine metabolic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0016051 // carbohydrate biosynthetic process // inferred from electronic annotation /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004360 // glutamine-fructose-6-phosphate transaminase (isomerizing) activity // inferred from electronic annotation /// 0004360 // glutamine-fructose-6-phosphate transaminase (isomerizing) activity // traceable author statement /// 0008483 // transaminase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr5:179727697-179780387 (-) // 96.58 // q35.3"]
["11754708_s_at",9.697335,10.885003,9.613336,8.826947,10.073372,10.190774,-0.02744317,0.1392386,-0.03999448,-0.16311693,0.02744317,0.044160366,0.81331575,0.56996167,1.0384545,0.05443805,1.0384545,"up","GNN",253724,"","0005737 // cytoplasm // inferred from electronic annotation","","chr12:104237527-104276366 (-) // 98.26 // q23.3"]
["11730046_a_at",10.4892845,7.7985854,9.732884,7.6784315,7.8880286,9.406101,0.28421354,-0.14341831,0.17623663,-0.1658194,-0.126966,0.126966,0.6760993,0.36551383,1.1180234,0.16095038,1.1180234,"up","DSCAML1",57453,"0001709 // cell fate determination // non-traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from direct assay /// 0007162 // negative regulation of cell adhesion // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007409 // axonogenesis // non-traceable author statement /// 0007417 // central nervous system development // non-traceable author statement /// 0007420 // brain development // inferred from direct assay /// 0009953 // dorsal/ventral pattern formation // non-traceable author statement /// 0048704 // embryonic skeletal system morphogenesis // inferred from direct assay /// 0070593 // dendrite self-avoidance // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0042803 // protein homodimerization activity // inferred from direct assay","chr11:117298488-117667976 (-) // 99.93 // q23.3"]
["11730545_a_at",175.8995,155.42072,158.64189,137.43083,148.39325,112.203674,0.21194935,0.033376694,0.06297159,-0.1440959,-0.033376217,-0.43668175,0.32658154,0.0809062,1.2375474,0.30748376,1.2375474,"up","EFCAB11",90141,"","","0005509 // calcium ion binding // inferred from electronic annotation","chr14:90261932-90421089 (-) // 69.34 // q32.11"]
["11750663_x_at",256.349,228.30971,204.38968,227.29672,213.75916,229.35693,0.1703248,0.0032076836,-0.15646219,-0.0032076836,-0.091798306,0.009809971,0.905206,0.74937934,1.0239099,0.034088805,1.0239099,"up","SLC24A6",80024,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0015297 // antiporter activity // inferred from electronic annotation","chr12:113737165-113772835 (-) // 93.78 // q24.13"]
["11740311_at",141.16515,127.45747,133.63489,76.95253,78.76295,78.85648,0.49372625,0.34635735,0.414639,-0.38161755,-0.3480692,-0.34635687,0.0153656,6.09709e-5,1.7134714,0.7769221,1.7134714,"up","HAS2",3037,"0001822 // kidney development // inferred from sequence or structural similarity /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0030213 // hyaluronan biosynthetic process // inferred from direct assay /// 0030213 // hyaluronan biosynthetic process // inferred from electronic annotation /// 0030213 // hyaluronan biosynthetic process // inferred from mutant phenotype /// 0030213 // hyaluronan biosynthetic process // inferred from sequence or structural similarity /// 0035810 // positive regulation of urine volume // inferred from sequence or structural similarity /// 0036120 // cellular response to platelet-derived growth factor stimulus // inferred from direct assay /// 0070295 // renal water absorption // inferred from sequence or structural similarity /// 0071347 // cellular response to interleukin-1 // inferred from expression pattern /// 0071356 // cellular response to tumor necrosis factor // inferred from expression pattern /// 0071498 // cellular response to fluid shear stress // inferred from expression pattern /// 1900625 // positive regulation of monocyte aggregation // inferred from mutant phenotype /// 2000147 // positive regulation of cell motility // inferred from mutant phenotype","0005624 // membrane fraction // inferred from direct assay /// 0005625 // soluble fraction // inferred from direct assay /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016758 // transferase activity, transferring hexosyl groups // inferred from electronic annotation /// 0050501 // hyaluronan synthase activity // inferred from mutant phenotype /// 0050501 // hyaluronan synthase activity // inferred from sequence or structural similarity /// 0050501 // hyaluronan synthase activity // inferred from electronic annotation","chr8:122625149-122653659 (-) // 96.22 // q24.13"]
["11740100_x_at",110.80998,118.61247,119.20033,154.6873,132.03276,138.23285,-0.17905378,-0.080886364,-0.073753834,0.30221272,0.073753834,0.1399579,0.16332434,0.020268817,-1.2168963,-0.28320622,1.2168963,"down","ZNF37A",7587,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:38383264-38412276 (+) // 57.79 // p11.1"]
["11757751_s_at",53.927624,55.723934,57.71029,69.55622,62.365593,53.031475,-0.072538376,-0.02526617,0.02526617,0.2946167,0.13718748,-0.09671402,0.6290136,0.31058478,-1.0987599,-0.13587615,1.0987599,"down","NRP1",8829,"0001525 // angiogenesis // inferred from electronic annotation /// 0001569 // patterning of blood vessels // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // non-traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0007413 // axonal fasciculation // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0009611 // response to wounding // inferred from electronic annotation /// 0009887 // organ morphogenesis // traceable author statement /// 0010595 // positive regulation of endothelial cell migration // traceable author statement /// 0014911 // positive regulation of smooth muscle cell migration // traceable author statement /// 0016358 // dendrite development // inferred from electronic annotation /// 0016477 // cell migration // inferred from electronic annotation /// 0021636 // trigeminal nerve morphogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030517 // negative regulation of axon extension // inferred from electronic annotation /// 0035729 // cellular response to hepatocyte growth factor stimulus // inferred from mutant phenotype /// 0035767 // endothelial cell chemotaxis // inferred from mutant phenotype /// 0038084 // vascular endothelial growth factor signaling pathway // non-traceable author statement /// 0038084 // vascular endothelial growth factor signaling pathway // traceable author statement /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from electronic annotation /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from mutant phenotype /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from mutant phenotype /// 0048010 // vascular endothelial growth factor receptor signaling pathway // traceable author statement /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from electronic annotation /// 0048012 // hepatocyte growth factor receptor signaling pathway // inferred from mutant phenotype /// 0048485 // sympathetic nervous system development // inferred from electronic annotation /// 0048841 // regulation of axon extension involved in axon guidance // inferred from electronic annotation /// 0048843 // negative regulation of axon extension involved in axon guidance // inferred from electronic annotation /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from mutant phenotype /// 0060301 // positive regulation of cytokine activity // traceable author statement /// 0060627 // regulation of vesicle-mediated transport // traceable author statement /// 0060666 // dichotomous subdivision of terminal units involved in salivary gland branching // inferred from electronic annotation /// 0071526 // semaphorin-plexin signaling pathway // non-traceable author statement /// 0071526 // semaphorin-plexin signaling pathway // inferred from electronic annotation","0002116 // semaphorin receptor complex // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005883 // neurofilament // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030426 // growth cone // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // traceable author statement /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043235 // receptor complex // traceable author statement","0004872 // receptor activity // inferred from electronic annotation /// 0005021 // vascular endothelial growth factor-activated receptor activity // non-traceable author statement /// 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from electronic annotation /// 0005021 // vascular endothelial growth factor-activated receptor activity // traceable author statement /// 0008201 // heparin binding // inferred from electronic annotation /// 0015026 // coreceptor activity // traceable author statement /// 0017154 // semaphorin receptor activity // non-traceable author statement /// 0017154 // semaphorin receptor activity // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from physical interaction /// 0019838 // growth factor binding // traceable author statement /// 0019955 // cytokine binding // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:33466494-33467764 (-) // 95.38 // p11.22"]
["11754741_x_at",30.560377,44.279114,42.60089,37.27519,42.534035,48.05738,-0.47808838,0.056875706,0.0011329651,-0.191535,-0.0011329651,0.17500734,0.79526347,0.5393044,-1.0974382,-0.13413972,1.0974382,"down","DZANK1",55184,"","0005622 // intracellular // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:18364720-18447674 (-) // 86.94 // p11.23"]
["11762106_at",46.695366,46.23336,56.654236,41.486206,51.586372,50.905704,-0.06227398,-0.07661915,0.21663046,-0.23292208,0.081436634,0.06227398,0.8863462,0.71034354,1.039327,0.05564967,1.039327,"up","LOC100289580",100289580,"","","","chr16:88797587-88805596 (+) // 99.61 // q24.3"]
["11740733_a_at",8.255611,10.289908,7.3008633,7.2854657,8.713417,7.2406974,0.08865404,0.40643716,-0.08865404,-0.09169984,0.1665175,-0.100592375,0.73303354,0.44261009,1.1050186,0.14407067,1.1050186,"up","SLC9C1",285335,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030317 // sperm motility // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0009434 // microtubule-based flagellum // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019861 // flagellum // inferred from electronic annotation /// 0020017 // flagellar membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0015297 // antiporter activity // inferred from electronic annotation /// 0015299 // solute:hydrogen antiporter activity // inferred from electronic annotation","chr3:111859751-112013105 (-) // 98.71 // q13.2"]
["11736780_x_at",8.199305,8.877425,8.305533,7.9300003,9.43816,9.144205,-0.06660533,0.04803419,-0.04803443,-0.11478639,0.13639855,0.09075093,0.78517896,0.5216037,-1.0422174,-0.05965621,1.0422174,"down","ZNF486",90649,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:20278029-20311670 (+) // 69.94 // p12"]
["11752244_a_at",101.95183,97.623344,99.38484,83.97173,96.84958,113.07925,0.049689293,-0.012899876,0.012899876,-0.2302227,-0.024380207,0.19913626,0.92285484,0.79354864,1.0245937,0.035051942,1.0245937,"up","KIRREL3",84623,"0030097 // hemopoiesis // inferred from sequence or structural similarity /// 0030097 // hemopoiesis // inferred from electronic annotation","0005576 // extracellular region // inferred from sequence or structural similarity /// 0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from sequence or structural similarity /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0043198 // dendritic shaft // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr11:126300836-126870706 (-) // 98.1 // q24.2"]
["11746063_a_at",98.3497,83.94154,89.24156,84.08169,81.41406,98.189606,0.18316698,-0.04536915,0.042962074,-0.042962074,-0.08947563,0.18081665,0.8818516,0.7004467,1.031059,0.044126928,1.031059,"up","IKBKB",3551,"0001782 // B cell homeostasis // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0003009 // skeletal muscle contraction // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0007249 // I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0007252 // I-kappaB phosphorylation // traceable author statement /// 0007252 // I-kappaB phosphorylation // inferred from electronic annotation /// 0008063 // Toll signaling pathway // traceable author statement /// 0009615 // response to virus // traceable author statement /// 0009636 // response to toxin // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0043122 // regulation of I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0051092 // positive regulation of NF-kappaB transcription factor activity // traceable author statement /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from electronic annotation /// 0070423 // nucleotide-binding oligomerization domain containing signaling pathway // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0008385 // IkappaB kinase complex // traceable author statement /// 0008385 // IkappaB kinase complex // inferred from electronic annotation /// 0009898 // internal side of plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0035631 // CD40 receptor complex // inferred from sequence or structural similarity /// 0045121 // membrane raft // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008384 // IkappaB kinase activity // traceable author statement /// 0008384 // IkappaB kinase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr8:42128819-42179979 (+) // 100.0 // p11.21"]
["11762766_at",18.049688,15.856971,17.926968,16.224804,22.55165,17.801146,0.014923096,-0.17193365,0.0050807,-0.13884974,0.33618212,-0.0050807,0.7697901,0.497422,-1.0827702,-0.114727125,1.0827702,"down","NGRN",51335,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030182 // neuron differentiation // non-traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","","chr15:90809001-90815443 (+) // 97.27 // q26.1"]
["11764017_x_at",972.3694,1012.2559,829.2616,852.91016,836.9694,886.5364,0.16121769,0.2192154,-0.06845951,-0.027893066,-0.055111885,0.027893066,0.5702513,0.25067043,1.0885154,0.12236182,1.0885154,"up","APH1A",51107,"0001656 // metanephros development // inferred from electronic annotation /// 0006509 // membrane protein ectodomain proteolysis // inferred from direct assay /// 0006915 // apoptotic process // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007220 // Notch receptor processing // inferred from mutant phenotype /// 0007220 // Notch receptor processing // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0016485 // protein processing // inferred from direct assay /// 0016485 // protein processing // inferred from electronic annotation /// 0031293 // membrane protein intracellular domain proteolysis // inferred from mutant phenotype /// 0031293 // membrane protein intracellular domain proteolysis // traceable author statement /// 0042987 // amyloid precursor protein catabolic process // inferred from mutant phenotype /// 0042987 // amyloid precursor protein catabolic process // traceable author statement /// 0043085 // positive regulation of catalytic activity // inferred from direct assay /// 0043085 // positive regulation of catalytic activity // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0004175 // endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr1:150237803-150238705 (-) // 97.43 // q21.2"]
["11743684_a_at",1094.3638,1225.4705,1202.4673,924.7439,1048.6566,985.9422,0.03077507,0.19401836,0.16668034,-0.21219158,-0.03077507,-0.11974239,0.18477026,0.02591058,1.190357,0.25139427,1.190357,"up","RABGAP1",23637,"0007049 // cell cycle // inferred from electronic annotation /// 0007049 // cell cycle // traceable author statement /// 0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // traceable author statement /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005875 // microtubule associated complex // traceable author statement","0005096 // GTPase activator activity // traceable author statement /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015631 // tubulin binding // traceable author statement","chr9:125703287-125867145 (+) // 97.07 // q33.2"]
["11716709_s_at",754.9808,686.9371,674.8898,776.89294,583.5946,674.19684,0.14902496,0.012763023,-0.012763023,0.19030094,-0.22244835,-0.014245033,0.8522556,0.64090043,1.0461859,0.06513916,1.0461859,"up","DDR1 /// MIR4640","100616237 /// 780","0001558 // regulation of cell growth // inferred from electronic annotation /// 0001952 // regulation of cell-matrix adhesion // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007565 // female pregnancy // inferred from electronic annotation /// 0007566 // embryo implantation // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0010715 // regulation of extracellular matrix disassembly // inferred from mutant phenotype /// 0010715 // regulation of extracellular matrix disassembly // inferred from electronic annotation /// 0014909 // smooth muscle cell migration // inferred from mutant phenotype /// 0014909 // smooth muscle cell migration // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0038063 // collagen-activated tyrosine kinase receptor signaling pathway // inferred from direct assay /// 0038063 // collagen-activated tyrosine kinase receptor signaling pathway // inferred from mutant phenotype /// 0038063 // collagen-activated tyrosine kinase receptor signaling pathway // inferred from electronic annotation /// 0038083 // peptidyl-tyrosine autophosphorylation // inferred from direct assay /// 0043583 // ear development // inferred from electronic annotation /// 0043588 // skin development // inferred from electronic annotation /// 0044319 // wound healing, spreading of cells // inferred from mutant phenotype /// 0044319 // wound healing, spreading of cells // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0060444 // branching involved in mammary gland duct morphogenesis // inferred from electronic annotation /// 0060749 // mammary gland alveolus development // inferred from electronic annotation /// 0061302 // smooth muscle cell-matrix adhesion // inferred from mutant phenotype /// 0061302 // smooth muscle cell-matrix adhesion // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // traceable author statement /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from direct assay /// 0005518 // collagen binding // inferred from mutant phenotype /// 0005518 // collagen binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0038062 // protein tyrosine kinase collagen receptor activity // inferred from direct assay","chr6:30852326-30867933 (+) // 95.3 // p21.33"]
["11743998_s_at",302.76306,295.11813,286.7672,364.45572,274.7674,273.38974,0.057602882,0.020706177,-0.020706177,0.32515717,-0.08237553,-0.089627266,0.9383821,0.8299063,-1.0223225,-0.031850427,1.0223225,"down","SSBP4",170463,"","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from electronic annotation","chr19:18530106-18545459 (+) // 94.2 // p13.11"]
["11738869_at",42.45994,43.24536,47.3975,45.834015,46.86574,54.938553,-0.12637377,-0.09993076,0.032334805,-0.016057491,0.016057491,0.24534321,0.51345944,0.20122579,-1.1068331,-0.14643769,1.1068331,"down","TBX1",6899,"0001525 // angiogenesis // inferred from sequence or structural similarity /// 0001568 // blood vessel development // inferred from sequence or structural similarity /// 0001708 // cell fate specification // inferred from sequence or structural similarity /// 0001755 // neural crest cell migration // inferred from sequence or structural similarity /// 0001934 // positive regulation of protein phosphorylation // inferred from sequence or structural similarity /// 0001945 // lymph vessel development // inferred from sequence or structural similarity /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from sequence or structural similarity /// 0003007 // heart morphogenesis // inferred from sequence or structural similarity /// 0003148 // outflow tract septum morphogenesis // inferred from sequence or structural similarity /// 0003151 // outflow tract morphogenesis // inferred from sequence or structural similarity /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006357 // regulation of transcription from RNA polymerase II promoter // non-traceable author statement /// 0007368 // determination of left/right symmetry // inferred from sequence or structural similarity /// 0007389 // pattern specification process // inferred from sequence or structural similarity /// 0007498 // mesoderm development // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from mutant phenotype /// 0007517 // muscle organ development // inferred from sequence or structural similarity /// 0007605 // sensory perception of sound // inferred from sequence or structural similarity /// 0008283 // cell proliferation // inferred from sequence or structural similarity /// 0008284 // positive regulation of cell proliferation // inferred from sequence or structural similarity /// 0009952 // anterior/posterior pattern specification // inferred from sequence or structural similarity /// 0021644 // vagus nerve morphogenesis // inferred from sequence or structural similarity /// 0030855 // epithelial cell differentiation // inferred from sequence or structural similarity /// 0030878 // thyroid gland development // inferred from sequence or structural similarity /// 0035176 // social behavior // inferred from sequence or structural similarity /// 0035909 // aorta morphogenesis // inferred from sequence or structural similarity /// 0042471 // ear morphogenesis // inferred from sequence or structural similarity /// 0042472 // inner ear morphogenesis // inferred from sequence or structural similarity /// 0042473 // outer ear morphogenesis // inferred from sequence or structural similarity /// 0042474 // middle ear morphogenesis // inferred from sequence or structural similarity /// 0042475 // odontogenesis of dentin-containing tooth // inferred from sequence or structural similarity /// 0042693 // muscle cell fate commitment // inferred from sequence or structural similarity /// 0043410 // positive regulation of MAPK cascade // inferred from sequence or structural similarity /// 0043587 // tongue morphogenesis // inferred from sequence or structural similarity /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from sequence or structural similarity /// 0045596 // negative regulation of cell differentiation // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0048384 // retinoic acid receptor signaling pathway // inferred from sequence or structural similarity /// 0048514 // blood vessel morphogenesis // inferred from sequence or structural similarity /// 0048538 // thymus development // inferred from mutant phenotype /// 0048644 // muscle organ morphogenesis // inferred from sequence or structural similarity /// 0048701 // embryonic cranial skeleton morphogenesis // inferred from sequence or structural similarity /// 0048703 // embryonic viscerocranium morphogenesis // inferred from mutant phenotype /// 0048752 // semicircular canal morphogenesis // inferred from sequence or structural similarity /// 0048844 // artery morphogenesis // inferred from sequence or structural similarity /// 0050679 // positive regulation of epithelial cell proliferation // inferred from sequence or structural similarity /// 0060017 // parathyroid gland development // inferred from mutant phenotype /// 0060023 // soft palate development // inferred from mutant phenotype /// 0060037 // pharyngeal system development // inferred from mutant phenotype /// 0060325 // face morphogenesis // inferred from sequence or structural similarity /// 0060415 // muscle tissue morphogenesis // inferred from sequence or structural similarity /// 0060982 // coronary artery morphogenesis // inferred from sequence or structural similarity /// 0070166 // enamel mineralization // inferred from sequence or structural similarity /// 0071300 // cellular response to retinoic acid // inferred from sequence or structural similarity /// 0090103 // cochlea morphogenesis // inferred from sequence or structural similarity /// 0097152 // mesenchymal cell apoptotic process // inferred from sequence or structural similarity /// 2000027 // regulation of organ morphogenesis // inferred from sequence or structural similarity /// 2001037 // positive regulation of tongue muscle cell differentiation // inferred from sequence or structural similarity /// 2001054 // negative regulation of mesenchymal cell apoptotic process // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0046983 // protein dimerization activity // traceable author statement","chr22:19744225-19771110 (+) // 70.68 // q11.21"]
["11725450_a_at",61.49453,60.834,62.55635,57.712044,57.327824,63.65693,0.0077900887,-0.0077900887,0.03248787,-0.0837965,-0.0934329,0.057649136,0.6795751,0.3699244,1.0357597,0.050689314,1.0357597,"up","TMEM45B",120224,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:129722367-129729899 (+) // 61.82 // q24.3"]
["11733642_s_at",392.04846,417.10852,413.33667,229.22287,226.93933,248.54341,0.32876682,0.41815758,0.40505219,-0.4455142,-0.45995855,-0.32876778,0.017883934,9.139398e-5,1.7355654,0.79540575,1.7355654,"up","NECAP2",55707,"0006810 // transport // inferred from electronic annotation /// 0006897 // endocytosis // inferred from sequence or structural similarity /// 0006897 // endocytosis // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005622 // intracellular // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005905 // coated pit // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0030125 // clathrin vesicle coat // inferred from sequence or structural similarity /// 0030665 // clathrin coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","","chr1:16767166-16786582 (+) // 96.04 // p36.13"]
["11742854_x_at",871.36176,883.8938,880.8293,997.54974,1010.1036,873.7843,-0.01809597,0.0025053024,-0.0025053024,0.17702103,0.19506359,-0.014090538,0.4233687,0.13553455,-1.0907824,-0.12536334,1.0907824,"down","UGDH",7358,"0001702 // gastrulation with mouth forming second // inferred from electronic annotation /// 0006011 // UDP-glucose metabolic process // traceable author statement /// 0006024 // glycosaminoglycan biosynthetic process // traceable author statement /// 0006065 // UDP-glucuronate biosynthetic process // inferred from electronic annotation /// 0006065 // UDP-glucuronate biosynthetic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003979 // UDP-glucose 6-dehydrogenase activity // traceable author statement /// 0003979 // UDP-glucose 6-dehydrogenase activity // inferred from electronic annotation /// 0009055 // electron carrier activity // traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// 0051287 // NAD binding // inferred from electronic annotation","chr4:39500374-39529211 (-) // 89.42 // p14"]
["11744167_a_at",416.9307,382.09216,376.46716,394.89133,350.37753,374.26007,0.13658524,0.0106983185,-0.0106983185,0.05823326,-0.11431217,-0.019181252,0.6686424,0.35662282,1.0501643,0.07061511,1.0501643,"up","DPP3",10072,"0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0004177 // aminopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008239 // dipeptidyl-peptidase activity // inferred from electronic annotation /// 0008239 // dipeptidyl-peptidase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:66247481-66277128 (+) // 91.11 // q13.2"]
["11715804_s_at",184.33424,206.7957,237.05612,224.16531,243.99777,230.4804,-0.30227947,-0.13639736,0.060625076,-0.020040989,0.102264404,0.020040512,0.5388419,0.22229958,-1.1173686,-0.16010515,1.1173686,"down","MIR3661 /// PPP2CA","100500905 /// 5515","0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000188 // inactivation of MAPK activity // non-traceable author statement /// 0001932 // regulation of protein phosphorylation // inferred from electronic annotation /// 0006275 // regulation of DNA replication // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006672 // ceramide metabolic process // non-traceable author statement /// 0006917 // induction of apoptosis // traceable author statement /// 0007126 // meiosis // inferred from electronic annotation /// 0007498 // mesoderm development // inferred from electronic annotation /// 0008380 // RNA splicing // non-traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0010033 // response to organic substance // non-traceable author statement /// 0010467 // gene expression // traceable author statement /// 0010469 // regulation of receptor activity // inferred from electronic annotation /// 0010719 // negative regulation of epithelial to mesenchymal transition // inferred from mutant phenotype /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019932 // second-messenger-mediated signaling // non-traceable author statement /// 0030111 // regulation of Wnt receptor signaling pathway // non-traceable author statement /// 0030155 // regulation of cell adhesion // non-traceable author statement /// 0030308 // negative regulation of cell growth // non-traceable author statement /// 0031952 // regulation of protein autophosphorylation // inferred from electronic annotation /// 0040008 // regulation of growth // non-traceable author statement /// 0042176 // regulation of protein catabolic process // inferred from electronic annotation /// 0042518 // negative regulation of tyrosine phosphorylation of Stat3 protein // non-traceable author statement /// 0045595 // regulation of cell differentiation // non-traceable author statement /// 0070208 // protein heterotrimerization // inferred from electronic annotation /// 0071902 // positive regulation of protein serine/threonine kinase activity // inferred from mutant phenotype","0000159 // protein phosphatase type 2A complex // inferred from direct assay /// 0000159 // protein phosphatase type 2A complex // traceable author statement /// 0000159 // protein phosphatase type 2A complex // inferred from electronic annotation /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000922 // spindle pole // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // non-traceable author statement /// 0016020 // membrane // non-traceable author statement","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr5:133531482-133562009 (-) // 90.62 // q31.1"]
["11724323_a_at",174.7437,202.34978,210.38943,203.86801,188.43503,230.1015,-0.21700239,-0.0053925514,0.05081892,0.0053920746,-0.10817623,0.18002701,0.782588,0.5173012,-1.0591741,-0.08293969,1.0591741,"down","SLC12A6",9990,"0001525 // angiogenesis // non-traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from direct assay /// 0006811 // ion transport // traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0071477 // cellular hypotonic salinity response // inferred from direct assay","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from sequence or structural similarity /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation /// 0015377 // cation:chloride symporter activity // inferred from electronic annotation /// 0015379 // potassium:chloride symporter activity // inferred from direct assay /// 0015379 // potassium:chloride symporter activity // inferred from electronic annotation","chr15:34521985-34629961 (-) // 88.81 // q14"]
["11757626_x_at",15.660406,14.245331,15.882016,14.349057,16.64825,14.506884,0.055191994,-0.08144045,0.07546449,-0.07097387,0.14344096,-0.055191994,0.966449,0.90612,1.0074072,0.010646931,1.0074072,"up","SLC16A4",9122,"0006810 // transport // inferred from electronic annotation /// 0015718 // monocarboxylic acid transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008028 // monocarboxylic acid transmembrane transporter activity // traceable author statement /// 0015293 // symporter activity // inferred from electronic annotation","chr1:110905474-110907588 (-) // 77.35 // p13.3"]
["AFFX-DapX-3_at",820.21387,616.82556,736.7893,889.3268,653.6662,687.1378,0.20507431,-0.20606327,0.050326347,0.32178783,-0.12237167,-0.050326347,0.95123804,0.86430544,-1.0233153,-0.033250745,1.0233153,"down",0.050326347,"","","0001680 // tRNA 3'-terminal CCA addition // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006396 // RNA processing // inferred from electronic annotation /// 0006464 // cellular protein modification process // inferred from electronic annotation /// 0008033 // tRNA processing // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009085 // lysine biosynthetic process // inferred from electronic annotation /// 0009089 // lysine biosynthetic process via diaminopimelate // inferred from electronic annotation /// 0019242 // methylglyoxal biosynthetic process // inferred from electronic annotation /// 0019877 // diaminopimelate biosynthetic process // inferred from electronic annotation /// 0042245 // RNA repair // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004077 // biotin-[acetyl-CoA-carboxylase] ligase activity // inferred from electronic annotation /// 0004810 // tRNA adenylyltransferase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008839 // dihydrodipicolinate reductase activity // inferred from electronic annotation /// 0008929 // methylglyoxal synthase activity // inferred from electronic annotation /// 0016437 // tRNA cytidylyltransferase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0052927 // CTP:tRNA cytidylyltransferase activity // inferred from electronic annotation /// 0052928 // CTP:3'-cytidine-tRNA cytidylyltransferase activity // inferred from electronic annotation /// 0052929 // ATP:3'-cytidine-cytidine-tRNA adenylyltransferase activity // inferred from electronic annotation /// 0070402 // NADPH binding // inferred from electronic annotation"]
["11729698_a_at",604.14557,517.2227,507.57504,626.1379,525.4261,589.6201,0.11825943,-0.10585117,-0.13301563,0.16984367,-0.08314896,0.08314896,0.7191797,0.4240275,-1.0694114,-0.09681696,1.0694114,"down","PPP2R4",5524,"0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from direct assay /// 0006457 // protein folding // inferred from electronic annotation /// 0032515 // negative regulation of phosphoprotein phosphatase activity // inferred from direct assay /// 0032516 // positive regulation of phosphoprotein phosphatase activity // inferred from direct assay /// 0035307 // positive regulation of protein dephosphorylation // inferred from direct assay /// 0035308 // negative regulation of protein dephosphorylation // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0043666 // regulation of phosphoprotein phosphatase activity // inferred from direct assay","0000159 // protein phosphatase type 2A complex // traceable author statement /// 0005625 // soluble fraction // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0034704 // calcium channel complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0008160 // protein tyrosine phosphatase activator activity // inferred from direct assay /// 0008160 // protein tyrosine phosphatase activator activity // traceable author statement /// 0008601 // protein phosphatase type 2A regulator activity // inferred from direct assay /// 0008601 // protein phosphatase type 2A regulator activity // traceable author statement /// 0016853 // isomerase activity // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0019211 // phosphatase activator activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // traceable author statement /// 0051721 // protein phosphatase 2A binding // inferred from direct assay","chr9:131873594-131911223 (+) // 95.36 // q34.11"]
["11737692_a_at",246.28636,204.59041,166.36841,228.05615,176.60316,176.79431,0.37293148,0.10533333,-0.1930232,0.2619834,-0.106894016,-0.105333805,0.8912631,0.72048056,1.0559162,0.07849533,1.0559162,"up","PLEKHG4",25894,"0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation","chr16:67313491-67323402 (+) // 99.16 // q22.1"]
["11730290_x_at",138.22481,156.5099,154.65459,146.0877,156.5099,146.72282,-0.12405491,0.055182934,0.037978172,-0.044236183,0.055182934,-0.037977695,0.9945271,0.9852627,-1.0008929,-0.0012875753,1.0008929,"down","ARHGAP5",394,"0002053 // positive regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0006184 // GTP catabolic process // traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007266 // Rho protein signal transduction // traceable author statement /// 0008361 // regulation of cell size // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0032321 // positive regulation of Rho GTPase activity // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0003924 // GTPase activity // traceable author statement /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation /// 0042169 // SH2 domain binding // inferred from physical interaction","chr14:32546494-32628932 (+) // 98.56 // q12"]
["11763004_x_at",41.402527,49.759464,44.240322,39.173943,40.845417,50.860214,-0.04782152,0.21743059,0.04782152,-0.12764597,-0.06736612,0.24899721,0.88944906,0.71738595,1.038486,0.05448177,1.038486,"up","NPHP3",27031,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0045494 // photoreceptor cell maintenance // inferred from mutant phenotype /// 0048496 // maintenance of organ identity // inferred from mutant phenotype /// 0048496 // maintenance of organ identity // inferred from electronic annotation /// 0060271 // cilium morphogenesis // inferred from sequence or structural similarity /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from direct assay /// 2000095 // regulation of Wnt receptor signaling pathway, planar cell polarity pathway // inferred from sequence or structural similarity","0005871 // kinesin complex // inferred from electronic annotation /// 0005929 // cilium // inferred from direct assay /// 0005929 // cilium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0072372 // primary cilium // inferred from direct assay","0003777 // microtubule motor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr3:132440288-132441258 (-) // 71.92 // q22.1"]
["11726941_at",77.35421,71.03914,61.183712,93.056206,84.98211,85.72291,-0.06783962,-0.19070578,-0.4061718,0.19878292,0.0678401,0.08036089,0.21367058,0.034770116,-1.2633319,-0.3372337,1.2633319,"down","ZKSCAN2",342357,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:25247323-25268880 (-) // 89.18 // p12.1"]
["11741271_a_at",248.15483,259.88962,279.8536,289.91406,330.3303,294.99036,-0.19890833,-0.13224983,-0.025476456,0.025476456,0.21376038,0.05051899,0.25773838,0.05016064,-1.1610769,-0.21546353,1.1610769,"down","GOPC",57120,"0006810 // transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // non-traceable author statement /// 0006893 // Golgi to plasma membrane transport // non-traceable author statement /// 0007289 // spermatid nucleus differentiation // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0043004 // cytoplasmic sequestering of CFTR protein // non-traceable author statement /// 0045176 // apical protein localization // non-traceable author statement /// 0051260 // protein homooligomerization // inferred from physical interaction","0000139 // Golgi membrane // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // non-traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030140 // trans-Golgi network transport vesicle // inferred from direct assay /// 0030140 // trans-Golgi network transport vesicle // non-traceable author statement /// 0030425 // dendrite // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0005083 // small GTPase regulator activity // inferred from electronic annotation /// 0005109 // frizzled binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0042980 // cystic fibrosis transmembrane conductance regulator binding // inferred from physical interaction","chr6:117881431-117923693 (-) // 99.98 // q22.1"]
["11740202_at",110.27837,148.2599,141.94122,136.31381,136.25317,141.76306,-0.33405685,0.092921734,0.030086517,-0.028274536,-0.028917313,0.028274536,0.8696154,0.6749708,-1.0429792,-0.06071044,1.0429792,"down","KISS1R",84634,"0000186 // activation of MAPKK activity // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // non-traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // inferred from direct assay /// 0007610 // behavior // non-traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0019722 // calcium-mediated signaling // inferred from electronic annotation /// 0046887 // positive regulation of hormone secretion // inferred from electronic annotation /// 0050482 // arachidonic acid secretion // inferred from electronic annotation /// 0050806 // positive regulation of synaptic transmission // inferred from electronic annotation /// 0051496 // positive regulation of stress fiber assembly // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008188 // neuropeptide receptor activity // inferred from direct assay /// 0008528 // G-protein coupled peptide receptor activity // inferred from electronic annotation /// 0042923 // neuropeptide binding // inferred from electronic annotation","chr19:917341-921014 (+) // 94.31 // p13.3"]
["11733471_at",27.103773,29.91688,29.861942,30.156712,30.91801,33.172253,-0.14822578,-0.005759716,-0.0084114075,0.005759716,0.04172802,0.14325762,0.41944212,0.13285093,-1.0850143,-0.117714114,1.0850143,"down","PLEKHG4B",153478,"0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation","chr5:140372-190085 (+) // 77.03 // p15.33"]
["11736633_at",147.86234,134.66675,129.91354,137.65387,131.99226,126.38645,0.1493311,0.014470577,-0.037372112,0.046121597,-0.0144701,-0.0770812,0.72689706,0.4346372,1.0405068,0.05728645,1.0405068,"up","AAK1",22848,"0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006897 // endocytosis // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032880 // regulation of protein localization // inferred from direct assay /// 0045747 // positive regulation of Notch signaling pathway // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from sequence or structural similarity /// 0050821 // protein stabilization // inferred from direct assay /// 2000369 // regulation of clathrin-mediated endocytosis // inferred from direct assay /// 2000369 // regulation of clathrin-mediated endocytosis // inferred from mutant phenotype","0005886 // plasma membrane // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019897 // extrinsic to plasma membrane // inferred from sequence or structural similarity /// 0030136 // clathrin-coated vesicle // inferred from sequence or structural similarity /// 0031252 // cell leading edge // inferred from sequence or structural similarity /// 0043195 // terminal button // inferred from sequence or structural similarity","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from sequence or structural similarity /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005112 // Notch binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0035612 // AP-2 adaptor complex binding // inferred from direct assay","chr2:69685129-69870977 (-) // 85.73 // p13.3"]
["11729119_a_at",485.1474,699.12085,678.2306,702.7944,830.4185,852.2924,-0.53089905,-0.003780365,-0.047546387,0.003780365,0.24451637,0.2820263,0.40315342,0.122778356,-1.2931142,-0.37084967,1.2931142,"down","HSPA1A /// HSPA1B","3303 /// 3304","0006402 // mRNA catabolic process // inferred from direct assay /// 0006916 // anti-apoptosis // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0030308 // negative regulation of cell growth // inferred from mutant phenotype /// 0042026 // protein refolding // inferred from direct assay /// 0090084 // negative regulation of inclusion body assembly // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // traceable author statement /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0008180 // signalosome // inferred from direct assay /// 0016234 // inclusion body // inferred from direct assay /// 0016235 // aggresome // inferred from direct assay /// 0016607 // nuclear speck // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0044183 // protein binding involved in protein folding // inferred from direct assay /// 0047485 // protein N-terminus binding // inferred from physical interaction /// 0051082 // unfolded protein binding // traceable author statement","chr6:31795513-31798031 (+) // 94.62 // p21.33"]
["11738458_at",6.854311,8.392229,7.3137336,7.148886,7.841031,7.9857883,-0.14381409,0.1482284,-0.05021763,-0.08310723,0.05021763,0.076608896,0.9165143,0.77871144,-1.0208995,-0.029840898,1.0208995,"down","ZIM3",114026,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:57645463-57656570 (-) // 77.81 // q13.43"]
["11750909_a_at",224.3131,282.04062,257.2759,147.31088,178.88956,191.29239,0.11486721,0.44525576,0.31266928,-0.49178314,-0.21157789,-0.11486721,0.1584726,0.019082801,1.4780279,0.56367356,1.4780279,"up","SLC16A7",9194,"0006810 // transport // inferred from electronic annotation /// 0006848 // pyruvate transport // traceable author statement /// 0015711 // organic anion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005477 // pyruvate secondary active transmembrane transporter activity // traceable author statement /// 0015293 // symporter activity // inferred from electronic annotation /// 0015355 // secondary active monocarboxylate transmembrane transporter activity // inferred from electronic annotation","chr12:60083133-60173477 (+) // 89.21 // q14.1"]
["11744291_x_at",605.32965,589.7234,586.6382,684.86005,615.8689,635.07635,-0.012451172,-0.050133705,-0.05770111,0.16563702,0.012451172,0.056757927,0.29903585,0.067762084,-1.0855132,-0.11837731,1.0855132,"down","BRMS1",25855,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0019987 // negative regulation of anti-apoptosis // inferred from direct assay /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0090312 // positive regulation of protein deacetylation // inferred from direct assay /// 2000210 // positive regulation of anoikis // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0051059 // NF-kappaB binding // inferred from direct assay","chr11:66104809-66112596 (-) // 94.12 // q13.2"]
["11734815_a_at",12.332366,9.132089,18.262201,10.325549,11.561792,10.712359,0.14812922,-0.28530407,0.71454,-0.10810208,0.05504465,-0.055044413,0.7578856,0.4796739,1.1716073,0.22848903,1.1716073,"up","GSG1",83445,"","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:13237041-13248740 (-) // 91.68 // p13.1"]
["11743628_at",238.26431,233.40367,265.98456,190.72281,211.41986,196.05624,0.10109377,0.07135773,0.2598734,-0.21999168,-0.071358204,-0.180202,0.14042236,0.0148408,1.2322477,0.3012923,1.2322477,"up","IRS1",3667,"0002053 // positive regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from sequence or structural similarity /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // non-traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from direct assay /// 0008286 // insulin receptor signaling pathway // inferred from mutant phenotype /// 0008286 // insulin receptor signaling pathway // inferred from physical interaction /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0010907 // positive regulation of glucose metabolic process // inferred from mutant phenotype /// 0014065 // phosphatidylinositol 3-kinase cascade // inferred from direct assay /// 0016042 // lipid catabolic process // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0030879 // mammary gland development // inferred from electronic annotation /// 0032000 // positive regulation of fatty acid beta-oxidation // inferred from mutant phenotype /// 0032868 // response to insulin stimulus // inferred from direct assay /// 0032869 // cellular response to insulin stimulus // inferred from mutant phenotype /// 0032869 // cellular response to insulin stimulus // inferred from electronic annotation /// 0034504 // protein localization to nucleus // inferred from electronic annotation /// 0042327 // positive regulation of phosphorylation // inferred from electronic annotation /// 0042593 // glucose homeostasis // traceable author statement /// 0043434 // response to peptide hormone stimulus // inferred from sequence or structural similarity /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from sequence or structural similarity /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from electronic annotation /// 0045725 // positive regulation of glycogen biosynthetic process // inferred from mutant phenotype /// 0045725 // positive regulation of glycogen biosynthetic process // non-traceable author statement /// 0046326 // positive regulation of glucose import // inferred from mutant phenotype /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from electronic annotation /// 0046628 // positive regulation of insulin receptor signaling pathway // inferred from sequence or structural similarity /// 0046628 // positive regulation of insulin receptor signaling pathway // inferred from electronic annotation /// 0046676 // negative regulation of insulin secretion // inferred from direct assay /// 0046676 // negative regulation of insulin secretion // inferred from electronic annotation /// 0048009 // insulin-like growth factor receptor signaling pathway // inferred from physical interaction /// 0048009 // insulin-like growth factor receptor signaling pathway // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048015 // phosphatidylinositol-mediated signaling // traceable author statement /// 0051291 // protein heterooligomerization // inferred from electronic annotation /// 0060397 // JAK-STAT cascade involved in growth hormone signaling pathway // traceable author statement /// 0070094 // positive regulation of glucagon secretion // inferred from electronic annotation /// 0090275 // negative regulation of somatostatin secretion // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005792 // microsome // inferred from sequence or structural similarity /// 0005792 // microsome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005899 // insulin receptor complex // inferred from sequence or structural similarity /// 0005899 // insulin receptor complex // inferred from electronic annotation /// 0005901 // caveola // inferred from direct assay","0004871 // signal transducer activity // traceable author statement /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005010 // insulin-like growth factor-activated receptor activity // inferred from electronic annotation /// 0005068 // transmembrane receptor protein tyrosine kinase adaptor activity // inferred from sequence or structural similarity /// 0005068 // transmembrane receptor protein tyrosine kinase adaptor activity // inferred from electronic annotation /// 0005068 // transmembrane receptor protein tyrosine kinase adaptor activity // traceable author statement /// 0005080 // protein kinase C binding // inferred from sequence or structural similarity /// 0005080 // protein kinase C binding // inferred from electronic annotation /// 0005158 // insulin receptor binding // inferred from physical interaction /// 0005158 // insulin receptor binding // inferred from electronic annotation /// 0005159 // insulin-like growth factor receptor binding // inferred from physical interaction /// 0005159 // insulin-like growth factor receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0042169 // SH2 domain binding // inferred from sequence or structural similarity /// 0042169 // SH2 domain binding // inferred from electronic annotation /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from physical interaction /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from sequence or structural similarity /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation","chr2:227596033-227664496 (-) // 95.08 // q36.3"]
["11723936_a_at",73.57374,56.88841,47.291157,72.730965,57.3121,54.11453,0.36570406,-0.005352974,-0.27191687,0.349082,0.005352974,-0.077471256,0.9235288,0.795054,-1.0445222,-0.06284311,1.0445222,"down","SNX1",6642,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from mutant phenotype /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006897 // endocytosis // traceable author statement /// 0007154 // cell communication // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016197 // endosomal transport // inferred from electronic annotation /// 0034498 // early endosome to Golgi transport // inferred from mutant phenotype /// 0045732 // positive regulation of protein catabolic process // inferred from electronic annotation","0005622 // intracellular // inferred from mutant phenotype /// 0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from direct assay /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from direct assay /// 0031901 // early endosome membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008289 // lipid binding // inferred from electronic annotation /// 0008565 // protein transporter activity // inferred from electronic annotation /// 0035091 // phosphatidylinositol binding // inferred from direct assay /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr15:64388082-64436433 (+) // 65.62 // q22.31"]
["11728012_at",19.388184,20.216675,21.729853,21.478344,21.329613,22.143106,-0.14269257,-0.082324505,0.021808147,0.005012512,-0.005012512,0.04898739,0.4769677,0.17347212,-1.0600009,-0.08406548,1.0600009,"down","PRTG",283659,"0007275 // multicellular organismal development // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr15:55903737-56035317 (-) // 93.1 // q21.3"]
["11721045_x_at",876.83417,784.68494,749.3895,985.9956,956.23047,900.8509,-0.01949215,-0.17968273,-0.2460804,0.14978504,0.10556221,0.01949215,0.21771592,0.03613833,-1.1810185,-0.24003153,1.1810185,"down","UNC50",25972,"0006810 // transport // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005637 // nuclear inner membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation","chr2:99225051-99234978 (+) // 95.53 // q11.2"]
["11718044_s_at",69.322235,80.92122,70.94254,70.6949,88.68875,87.46859,-0.12826633,0.09493351,-0.09493351,-0.09997845,0.22716665,0.2071805,0.61039734,0.29030153,-1.1128134,-0.15421164,1.1128134,"down","RAB11B",9230,"0006184 // GTP catabolic process // inferred from direct assay /// 0006184 // GTP catabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0003924 // GTPase activity // traceable author statement /// 0005525 // GTP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from electronic annotation /// 0019003 // GDP binding // inferred from direct assay","chr19:8455081-8469318 (+) // 92.83 // p13.2"]
["11715911_at",48.423878,46.06964,38.954296,46.88641,42.215645,44.40354,0.09847307,0.026570797,-0.21546316,0.05192423,-0.099467754,-0.026570797,0.9867506,0.9610284,-1.0037744,-0.005435064,1.0037744,"down","MYO6",4646,"0006605 // protein targeting // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from sequence or structural similarity /// 0006897 // endocytosis // inferred from mutant phenotype /// 0006897 // endocytosis // inferred from sequence or structural similarity /// 0006897 // endocytosis // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007416 // synapse assembly // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from direct assay /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0014047 // glutamate secretion // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016358 // dendrite development // inferred from electronic annotation /// 0030048 // actin filament-based movement // inferred from sequence or structural similarity /// 0030048 // actin filament-based movement // non-traceable author statement /// 0030330 // DNA damage response, signal transduction by p53 class mediator // inferred from direct assay /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0042491 // auditory receptor cell differentiation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0048167 // regulation of synaptic plasticity // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0051046 // regulation of secretion // inferred from mutant phenotype /// 0071257 // cellular response to electrical stimulus // inferred from electronic annotation","0001726 // ruffle // inferred from direct assay /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005902 // microvillus // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0005938 // cell cortex // inferred from sequence or structural similarity /// 0012506 // vesicle membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0016459 // myosin complex // inferred from electronic annotation /// 0016461 // unconventional myosin complex // traceable author statement /// 0016461 // unconventional myosin complex // non-traceable author statement /// 0016591 // DNA-directed RNA polymerase II, holoenzyme // inferred from direct assay /// 0030139 // endocytic vesicle // inferred from sequence or structural similarity /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0030665 // clathrin coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031941 // filamentous actin // inferred from direct assay /// 0031941 // filamentous actin // inferred from sequence or structural similarity /// 0031965 // nuclear membrane // inferred from direct assay /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation /// 0045334 // clathrin-coated endocytic vesicle // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from sequence or structural similarity /// 0003774 // motor activity // inferred from electronic annotation /// 0003779 // actin binding // traceable author statement /// 0003779 // actin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from sequence or structural similarity /// 0005516 // calmodulin binding // traceable author statement /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0043531 // ADP binding // inferred from sequence or structural similarity /// 0051015 // actin filament binding // inferred from direct assay /// 0051015 // actin filament binding // inferred from sequence or structural similarity /// 0060001 // minus-end directed microfilament motor activity // non-traceable author statement","chr6:76458892-76629254 (+) // 91.39 // q14.1"]
["11755543_a_at",134.66318,125.72176,128.64459,105.0398,100.88955,95.45475,0.22877026,0.12964916,0.16280508,-0.12964916,-0.18780804,-0.26769638,0.0523178,0.0017332858,1.2912718,0.3687927,1.2912718,"up","TMC5",79838,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr16:19467838-19509462 (+) // 97.21 // p12.3"]
["11745102_a_at",49.089203,47.242367,48.234142,48.499577,46.52106,54.45658,0.021392345,-0.03393221,-0.003958702,0.003958702,-0.056129456,0.17109299,0.8039362,0.5532296,-1.0317835,-0.045140225,1.0317835,"down","NOX4",50507,"0000902 // cell morphogenesis // inferred from sequence or structural similarity /// 0000902 // cell morphogenesis // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0007569 // cell aging // inferred from sequence or structural similarity /// 0007569 // cell aging // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0035051 // cardiac cell differentiation // inferred from electronic annotation /// 0042554 // superoxide anion generation // inferred from sequence or structural similarity /// 0042554 // superoxide anion generation // inferred from electronic annotation /// 0043406 // positive regulation of MAP kinase activity // inferred from electronic annotation /// 0045453 // bone resorption // inferred from electronic annotation /// 0050667 // homocysteine metabolic process // inferred from direct assay /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0072593 // reactive oxygen species metabolic process // inferred from direct assay /// 0072593 // reactive oxygen species metabolic process // inferred from electronic annotation /// 2000573 // positive regulation of DNA biosynthetic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0071944 // cell periphery // inferred from electronic annotation","0000166 // nucleotide binding // traceable author statement /// 0009055 // electron carrier activity // traceable author statement /// 0016174 // NAD(P)H oxidase activity // traceable author statement /// 0016175 // superoxide-generating NADPH oxidase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0019826 // oxygen sensor activity // traceable author statement /// 0020037 // heme binding // traceable author statement /// 0050660 // flavin adenine dinucleotide binding // traceable author statement /// 0072341 // modified amino acid binding // inferred from direct assay","chr11:89223624-89224733 (-) // 73.87 // q14.3"]
["11739259_a_at",181.68953,137.15344,130.62997,132.72156,126.65166,120.76105,0.46453094,0.058846474,-0.01145792,0.011458397,-0.05607748,-0.12478876,0.52787316,0.21300876,1.1704872,0.22710912,1.1704872,"up","USP21",27005,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006464 // cellular protein modification process // non-traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016578 // histone deubiquitination // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003713 // transcription coactivator activity // inferred from sequence or structural similarity /// 0004221 // ubiquitin thiolesterase activity // inferred from direct assay /// 0004221 // ubiquitin thiolesterase activity // inferred from sequence or structural similarity /// 0004221 // ubiquitin thiolesterase activity // traceable author statement /// 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific protease activity // inferred from direct assay /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from mutant phenotype /// 0008234 // cysteine-type peptidase activity // inferred from sequence or structural similarity /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019784 // NEDD8-specific protease activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:161129272-161135515 (+) // 97.26 // q23.3"]
["11731117_s_at",170.6752,180.2419,201.74355,146.56651,139.15765,166.04079,0.019857883,0.098538876,0.261127,-0.19984007,-0.27467537,-0.019857883,0.2526009,0.04843337,1.2237417,0.29129902,1.2237417,"up","PLEKHA8P1",51054,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0046836 // glycolipid transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation /// 0017089 // glycolipid transporter activity // inferred from electronic annotation /// 0051861 // glycolipid binding // inferred from electronic annotation","chr12:45566816-45609789 (-) // 87.37 // q12"]
["11750407_a_at",13.503925,14.672736,11.574478,15.794853,15.419118,12.736856,-0.05987954,0.05987954,-0.28231144,0.16619611,0.13146162,-0.1442492,0.6707436,0.3591693,-1.1059146,-0.14523998,1.1059146,"down","FLT4",2324,"0001525 // angiogenesis // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from mutant phenotype /// 0001938 // positive regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001944 // vasculature development // inferred from sequence or structural similarity /// 0001944 // vasculature development // inferred from electronic annotation /// 0001945 // lymph vessel development // inferred from sequence or structural similarity /// 0001945 // lymph vessel development // inferred from electronic annotation /// 0001946 // lymphangiogenesis // inferred from mutant phenotype /// 0001946 // lymphangiogenesis // inferred from sequence or structural similarity /// 0001946 // lymphangiogenesis // inferred from electronic annotation /// 0002040 // sprouting angiogenesis // inferred from sequence or structural similarity /// 0002040 // sprouting angiogenesis // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from mutant phenotype /// 0010595 // positive regulation of endothelial cell migration // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0030307 // positive regulation of cell growth // inferred from electronic annotation /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from direct assay /// 0035924 // cellular response to vascular endothelial growth factor stimulus // inferred from mutant phenotype /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from direct assay /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from mutant phenotype /// 0038084 // vascular endothelial growth factor signaling pathway // traceable author statement /// 0038084 // vascular endothelial growth factor signaling pathway // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043410 // positive regulation of MAPK cascade // inferred from mutant phenotype /// 0046330 // positive regulation of JNK cascade // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from direct assay /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from genetic interaction /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from mutant phenotype /// 0048010 // vascular endothelial growth factor receptor signaling pathway // traceable author statement /// 0048010 // vascular endothelial growth factor receptor signaling pathway // inferred from electronic annotation /// 0048514 // blood vessel morphogenesis // inferred from sequence or structural similarity /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0060312 // regulation of blood vessel remodeling // inferred from sequence or structural similarity /// 0060312 // regulation of blood vessel remodeling // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from mutant phenotype /// 0090037 // positive regulation of protein kinase C signaling cascade // inferred from mutant phenotype","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from mutant phenotype /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from direct assay /// 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from mutant phenotype /// 0005021 // vascular endothelial growth factor-activated receptor activity // inferred from electronic annotation /// 0005021 // vascular endothelial growth factor-activated receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019838 // growth factor binding // inferred from physical interaction /// 0019838 // growth factor binding // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from physical interaction","chr5:180047974-180076545 (-) // 99.96 // q35.3"]
["11742565_at",28.279335,29.973969,29.523043,28.166231,31.292486,31.320662,-0.07302761,0.010934353,-0.010934353,-0.07880926,0.073040485,0.07433891,0.739596,0.45208266,-1.0332571,-0.047199313,1.0332571,"down","OR51L1",119682,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:5020212-5021160 (+) // 100.0 // p15.4"]
["11719569_a_at",1839.6174,1790.0063,1686.7214,1790.443,1697.3942,1675.8033,0.077762604,0.038321495,-0.047421455,0.0386734,-0.038321495,-0.056790352,0.72059065,0.42613658,1.0293263,0.041700423,1.0293263,"up","QARS",5859,"0006412 // translation // inferred from electronic annotation /// 0006418 // tRNA aminoacylation for protein translation // traceable author statement /// 0006418 // tRNA aminoacylation for protein translation // inferred from electronic annotation /// 0006425 // glutaminyl-tRNA aminoacylation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0043039 // tRNA aminoacylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// 0004819 // glutamine-tRNA ligase activity // traceable author statement /// 0004819 // glutamine-tRNA ligase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016876 // ligase activity, forming aminoacyl-tRNA and related compounds // inferred from electronic annotation","chr3:49133364-49142562 (-) // 97.77 // p21.31"]
["11752769_a_at",21.39044,27.387089,26.701275,27.087965,27.618761,27.224485,-0.3443122,0.012217522,-0.024369717,-0.0036263466,0.024370193,0.0036263466,0.643427,0.32618806,-1.0919788,-0.12694483,1.0919788,"down","PGBD5",79605,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:230458993-230513391 (-) // 96.18 // q42.13"]
["11751630_a_at",40.789093,56.44604,37.971478,42.74977,54.01389,48.231815,-0.15476751,0.31392145,-0.2580347,-0.087034225,0.25037956,0.087034225,0.8272685,0.5937676,-1.0840416,-0.11642011,1.0840416,"down","HDAC11",79885,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0014003 // oligodendrocyte development // inferred from electronic annotation /// 0016568 // chromatin modification // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016575 // histone deacetylation // inferred from direct assay","0000118 // histone deacetylase complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay","0004407 // histone deacetylase activity // inferred from direct assay /// 0008134 // transcription factor binding // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0031078 // histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0032041 // NAD-dependent histone deacetylase activity (H3-K14 specific) // inferred from electronic annotation /// 0032129 // histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0034739 // histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation /// 0046969 // NAD-dependent histone deacetylase activity (H3-K9 specific) // inferred from electronic annotation /// 0046970 // NAD-dependent histone deacetylase activity (H4-K16 specific) // inferred from electronic annotation","chr3:13521805-13546456 (+) // 99.61 // p25.1"]
["11752325_a_at",29.937246,33.296368,32.55293,26.244358,32.37879,36.39695,-0.11697674,0.03644657,0.0038690567,-0.306911,-0.0038690567,0.16489935,0.9585175,0.88184774,1.0161217,0.023073267,1.0161217,"up","NTRK3",4916,"0001764 // neuron migration // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019056 // modulation by virus of host transcription // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042490 // mechanoreceptor differentiation // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048665 // neuron fate specification // inferred from electronic annotation /// 0048678 // response to axon injury // inferred from electronic annotation /// 0048691 // positive regulation of axon extension involved in regeneration // inferred from electronic annotation /// 0048712 // negative regulation of astrocyte differentiation // inferred from electronic annotation /// 0051412 // response to corticosterone stimulus // inferred from electronic annotation /// 0060548 // negative regulation of cell death // inferred from electronic annotation /// 0071300 // cellular response to retinoic acid // inferred from electronic annotation /// 0090102 // cochlea development // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005030 // neurotrophin receptor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0043121 // neurotrophin binding // traceable author statement","chr15:88459503-88749164 (-) // 99.91 // q25.3"]
["11740630_a_at",21.912119,25.47226,22.772045,19.230135,23.313986,24.74935,-0.072500706,0.14469719,-0.016965866,-0.26086092,0.016965866,0.10316086,0.8497392,0.6359233,1.0463182,0.065321624,1.0463182,"up","ZNF780B",163131,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:40540227-40562082 (-) // 99.93 // q13.2"]
["11739712_a_at",250.25261,274.5978,276.35013,238.99892,275.61438,263.5091,-0.10420132,0.029733658,0.038910866,-0.1705823,0.035064697,-0.029733658,0.83133084,0.60133606,1.0304192,0.043231424,1.0304192,"up","PHACTR2",9749,"","","0003779 // actin binding // inferred from electronic annotation /// 0004864 // protein phosphatase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:143999101-144152321 (+) // 92.55 // q24.2"]
["11760403_at",113.222855,101.55296,94.519714,88.777145,89.944756,89.4792,0.29626608,0.13933325,0.03578806,-0.054638863,-0.03578806,-0.04327488,0.2728861,0.056577113,1.1500498,0.20169634,1.1500498,"up","SPTAN1",6709,"0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0051693 // actin filament capping // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005938 // cell cortex // inferred from electronic annotation /// 0008091 // spectrin // traceable author statement /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003779 // actin binding // inferred from electronic annotation /// 0003779 // actin binding // traceable author statement /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation","chr9:131314868-131361964 (+) // 88.58 // q34.11"]
["11739549_s_at",52.345665,28.09293,30.667683,65.428055,38.012592,30.664915,0.61647177,-0.28139114,-0.1548791,0.9383111,0.1548791,-0.15500927,0.82399315,0.5880637,-1.1914016,-0.2526598,1.1914016,"down","LOC100288142 /// NBPF1 /// NBPF10","100132406 /// 100288142 /// 55672","","0005737 // cytoplasm // inferred from electronic annotation","","chr1:146374089-146467746 (+) // 80.04 // q21.1 /// chr1:144593698-145370306 (+) // 80.33 // q21.1 /// chr1:16888813-16940092 (-) // 86.26 // p36.13 /// chr1:147574320-149138067 (-) // 79.93 // q21.2 /// chr1:146032539-147624275 (-) // 80.55 // q21.1"]
["11733880_a_at",111.153175,91.77947,104.99142,102.5246,95.31058,102.91694,0.11382437,-0.16248178,0.031546116,-0.002755165,-0.10801697,0.002755165,0.90637386,0.75192606,1.0212258,0.030301904,1.0212258,"up","HMGXB4",10042,"0008333 // endosome to lysosome transport // non-traceable author statement /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from sequence or structural similarity","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0016589 // NURF complex // inferred from direct assay","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation","chr22:35657846-35691800 (+) // 90.12 // q12.3"]
["11731013_a_at",22.449549,18.434875,16.866602,14.251835,17.254183,19.533777,0.33199453,0.047745705,-0.08052254,-0.32354426,-0.047745705,0.13127899,0.68274295,0.37421972,1.132682,0.17974284,1.132682,"up","SYN2",6854,"0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation","0008021 // synaptic vesicle // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation","chr3:12045861-12227227 (+) // 96.05 // p25.2"]
["11740137_s_at",59.68237,50.21312,52.528023,66.22077,58.732464,54.051144,0.08306265,-0.16617727,-0.10115433,0.23304224,0.059916973,-0.059916496,0.6060676,0.28629163,-1.1012208,-0.13910383,1.1012208,"down","MCTP2",55784,"0019722 // calcium-mediated signaling // non-traceable author statement","0005624 // membrane fraction // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from direct assay /// 0005544 // calcium-dependent phospholipid binding // inferred from direct assay","chr15:94774766-95027180 (+) // 79.27 // q26.2"]
["11741705_at",52.20906,48.557144,49.622585,46.11786,50.772892,49.586353,0.07383013,-0.030786514,0.00052690506,-0.1051445,0.03358841,-0.00052690506,0.7714563,0.49956048,1.0270818,0.03855115,1.0270818,"up","NR4A3",8013,"0001707 // mesoderm formation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0021766 // hippocampus development // inferred from electronic annotation /// 0030522 // intracellular receptor mediated signaling pathway // inferred from electronic annotation /// 0030534 // adult behavior // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0033554 // cellular response to stress // inferred from electronic annotation /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // traceable author statement /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0045787 // positive regulation of cell cycle // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048752 // semicircular canal morphogenesis // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation /// 0060005 // vestibular reflex // inferred from electronic annotation /// 2000108 // positive regulation of leukocyte apoptotic process // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation","0001077 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0004887 // thyroid hormone receptor activity // traceable author statement /// 0005488 // binding // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:102584136-102599346 (+) // 71.99 // q22.33"]
["11727167_at",58.868233,83.623116,70.7145,99.507774,98.49788,91.09062,-0.5681124,-0.061699867,-0.30359554,0.18920755,0.17449093,0.061700344,0.23062542,0.040494267,-1.3688226,-0.45293546,1.3688226,"down","FAM40B",57464,"0007010 // cytoskeleton organization // inferred from mutant phenotype /// 0008360 // regulation of cell shape // inferred from mutant phenotype /// 0016477 // cell migration // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","","chr7:129074271-129128240 (+) // 88.99 // q32.1"]
["11720072_a_at",322.17767,287.53543,293.00342,261.2205,260.00543,282.75388,0.17621326,0.012096405,0.039274216,-0.1263752,-0.13310146,-0.012096405,0.2825128,0.060557663,1.1222434,0.16638562,1.1222434,"up","RING1",6015,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0016568 // chromatin modification // non-traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016574 // histone ubiquitination // inferred from electronic annotation /// 0035518 // histone H2A monoubiquitination // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0048593 // camera-type eye morphogenesis // inferred from electronic annotation","0000151 // ubiquitin ligase complex // inferred from electronic annotation /// 0001739 // sex chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0016604 // nuclear body // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation /// 0031519 // PcG protein complex // inferred from direct assay /// 0031519 // PcG protein complex // inferred from electronic annotation /// 0035102 // PRC1 complex // inferred from direct assay","0003682 // chromatin binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:33176272-33180493 (+) // 90.34 // p21.32"]
["11753068_a_at",10.390176,10.092606,10.662121,13.270569,11.473288,12.402798,-0.09016633,-0.13208795,-0.052892208,0.26284337,0.052892208,0.16527915,0.15294036,0.017719965,-1.1909012,-0.25205368,1.1909012,"down","CFI",3426,"0006508 // proteolysis // inferred from electronic annotation /// 0006958 // complement activation, classical pathway // inferred from electronic annotation /// 0030449 // regulation of complement activation // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // traceable author statement /// 0005044 // scavenger receptor activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr4:110661853-110723196 (-) // 96.0 // q25"]
["11742266_a_at",8.461451,8.799055,9.068757,8.266683,9.521069,9.213426,-0.07822156,-0.021778345,0.021778107,-0.111818075,0.09199691,0.04461074,0.85182494,0.6403475,-1.0240861,-0.03433704,1.0240861,"down","C3orf35",339883,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:37440652-37476987 (+) // 47.28 // p22.2"]
["11716786_s_at",270.01266,294.54785,301.0559,268.30975,352.38928,297.99786,-0.1338749,-0.008399963,0.023129463,-0.14300251,0.25026798,0.008399963,0.8093651,0.5626481,-1.0557514,-0.07827022,1.0557514,"down","TRAK2",66008,"0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006493 // protein O-linked glycosylation // inferred from electronic annotation /// 0006605 // protein targeting // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity","0005102 // receptor binding // inferred from sequence or structural similarity /// 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from electronic annotation /// 0050811 // GABA receptor binding // inferred from electronic annotation /// 0050811 // GABA receptor binding // non-traceable author statement","chr2:202241929-202316334 (-) // 97.93 // q33.1"]
["11762377_at",55.06146,57.74555,57.20506,47.32396,61.82153,68.80505,-0.06188345,0.0067839622,-0.0067834854,-0.28035545,0.105183125,0.25958776,0.91629064,0.77829516,-1.0343798,-0.04876606,1.0343798,"down","KIAA0317",9870,"0006464 // cellular protein modification process // inferred from electronic annotation /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // not recorded","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // not recorded /// 0005737 // cytoplasm // not recorded /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // not recorded /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation","chr14:75119881-75179807 (-) // 88.46 // q24.3"]
["11724623_a_at",23.432514,36.42102,33.91264,31.338566,36.990738,36.923847,-0.58478546,0.051474094,-0.051474094,-0.16535807,0.073866844,0.071255684,0.7205803,0.42594397,-1.1393281,-0.1881833,1.1393281,"down","CLEC1A",51267,"0006952 // defense response // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement","0005622 // intracellular // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004888 // transmembrane signaling receptor activity // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr12:10222153-10251664 (-) // 92.63 // p13.2"]
["11752398_a_at",24.887445,25.705246,31.158575,21.815403,25.154552,28.568886,-0.031023026,0.015621662,0.2931881,-0.22109413,-0.015621662,0.16800356,0.7632485,0.48758593,1.0833502,0.11549965,1.0833502,"up","C1orf228",339541,"","","","chr1:45140393-45191261 (+) // 99.02 // p34.1"]
["11724982_s_at",95.33033,89.12642,88.486435,111.90283,86.12274,85.46824,0.10228109,0.0051989555,-0.0051984787,0.33351994,-0.0442605,-0.05526638,0.9080051,0.75666916,-1.0308996,-0.043903895,1.0308996,"down","PCDH7",5099,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr4:30722029-31148425 (+) // 95.21 // p15.1"]
["11755569_a_at",84.22287,81.7802,82.982155,72.332054,81.54899,90.05422,0.03193569,-0.01052475,0.010524273,-0.18764162,-0.01460886,0.12851763,0.89182734,0.7219329,1.024715,0.03522264,1.024715,"up","TMEM64",169200,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr8:91637293-91657936 (-) // 88.54 // q21.3"]
["11744644_s_at",60.417496,58.952816,63.764343,59.173016,66.69049,64.9093,-0.038891792,-0.07429743,0.038891792,-0.068918705,0.10362291,0.06456709,0.70503277,0.40367925,-1.0409179,-0.057856247,1.0409179,"down","HSFX1 /// HSFX2","100130086 /// 100506164","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chrX:148676926-148858525 (+) // 99.26 // q28 /// chrX:148674174-148855773 (-) // 99.21 // q28"]
["11760732_at",12.957157,13.864026,17.493412,11.234952,15.016268,16.549175,-0.15518713,-0.057590008,0.27787542,-0.36094236,0.057590008,0.19782305,0.92645484,0.80265504,1.0402107,0.056875814,1.0402107,"up","TUBB6",84617,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0007017 // microtubule-based process // inferred from electronic annotation /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0051258 // protein polymerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr18:12307667-12326557 (+) // 67.23 // p11.21"]
["11722710_at",306.08463,274.84915,245.28317,411.95398,341.46167,337.0447,-0.06950474,-0.22479534,-0.38898706,0.3590479,0.08828831,0.06950474,0.22342508,0.03820806,-1.3195469,-0.40004265,1.3195469,"down","CBX2",84733,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007548 // sex differentiation // inferred from electronic annotation /// 0016568 // chromatin modification // non-traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045137 // development of primary sexual characteristics // inferred from mutant phenotype /// 0045892 // negative regulation of transcription, DNA-dependent // non-traceable author statement","0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0031519 // PcG protein complex // inferred from direct assay /// 0031519 // PcG protein complex // inferred from electronic annotation /// 0035102 // PRC1 complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0035064 // methylated histone residue binding // inferred from electronic annotation","chr17:77751930-77762305 (+) // 96.17 // q25.3"]
["11739101_a_at",471.90005,482.16098,477.2961,538.6823,570.72595,540.02356,-0.110993385,-0.07995987,-0.09459019,0.07995987,0.1633234,0.08354759,0.05624008,0.0020509933,-1.1519873,-0.20412482,1.1519873,"down","SYF2",25949,"0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","","chr1:25548766-25559000 (-) // 87.73 // p36.11"]
["11721547_s_at",348.82315,337.89734,374.24796,405.15997,394.66638,405.2529,-0.13981819,-0.18572903,-0.038319588,0.0761776,0.038319588,0.07650852,0.14169143,0.015125801,-1.1367835,-0.18495749,1.1367835,"down","ZEB1",6935,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006955 // immune response // traceable author statement /// 0007399 // nervous system development // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0014823 // response to activity // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0071560 // cellular response to transforming growth factor beta stimulus // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003713 // transcription coactivator activity // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070888 // E-box binding // inferred from sequence or structural similarity","chr10:31610063-31818734 (+) // 91.87 // p11.22"]
["11746359_a_at",757.0993,738.55646,761.88983,740.9722,710.5421,681.9052,0.033418655,-0.0023555756,0.042518616,0.0023555756,-0.058143616,-0.117492676,0.34837246,0.091479234,1.0586953,0.08228745,1.0586953,"up","NUCB2",4925,"","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005640 // nuclear outer membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005797 // Golgi medial cisterna // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0005164 // tumor necrosis factor receptor binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr11:17298283-17352927 (+) // 90.54 // p15.1"]
["11762573_at",7.210175,8.986978,9.267803,7.4842014,7.505906,8.000796,-0.10405064,0.21375132,0.25814247,-0.050236702,-0.046058893,0.046058655,0.6239328,0.30410329,1.1014165,0.13936009,1.1014165,"up","BAGE",574,"","0005576 // extracellular region // inferred from electronic annotation","","chr5:180708399-180711301 (+) // 19.46 // q35.3"]
["11751116_a_at",1696.5461,1652.6124,1504.7075,1223.0321,1181.578,1306.0566,0.27525043,0.23739815,0.1021328,-0.19688797,-0.24663544,-0.1021328,0.079982474,0.0045937905,1.3075014,0.38681254,1.3075014,"up","ACTN1",87,"0002576 // platelet degranulation // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0034329 // cell junction assembly // traceable author statement /// 0042981 // regulation of apoptotic process // non-traceable author statement /// 0048041 // focal adhesion assembly // inferred from mutant phenotype /// 0051017 // actin filament bundle assembly // inferred from electronic annotation /// 0051271 // negative regulation of cellular component movement // inferred from mutant phenotype","0001725 // stress fiber // inferred from electronic annotation /// 0001726 // ruffle // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005916 // fascia adherens // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from mutant phenotype /// 0016020 // membrane // inferred from electronic annotation /// 0030018 // Z disc // inferred from electronic annotation /// 0030864 // cortical actin cytoskeleton // inferred from electronic annotation /// 0031093 // platelet alpha granule lumen // traceable author statement /// 0031143 // pseudopodium // traceable author statement /// 0042995 // cell projection // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005178 // integrin binding // inferred from direct assay /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017166 // vinculin binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0044325 // ion channel binding // inferred from physical interaction /// 0051015 // actin filament binding // inferred from electronic annotation","chr14:69350891-69444971 (-) // 96.75 // q24.1"]
["11715436_at",299.36176,172.27776,180.91992,223.8303,161.45236,146.65718,0.76184654,-0.03530693,0.035307407,0.34236193,-0.12893534,-0.26759577,0.72811955,0.43604475,1.2074851,0.27200535,1.2074851,"up","TIMP3",7078,"0007417 // central nervous system development // inferred from electronic annotation /// 0007568 // aging // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // non-traceable author statement /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0010033 // response to organic substance // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0042246 // tissue regeneration // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0043200 // response to amino acid stimulus // inferred from electronic annotation /// 0043627 // response to estrogen stimulus // inferred from electronic annotation /// 0045861 // negative regulation of proteolysis // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0051045 // negative regulation of membrane protein ectodomain proteolysis // inferred from mutant phenotype /// 0051593 // response to folic acid // inferred from electronic annotation /// 0071310 // cellular response to organic substance // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0005604 // basement membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from direct assay","0004857 // enzyme inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008191 // metalloendopeptidase inhibitor activity // traceable author statement /// 0008191 // metalloendopeptidase inhibitor activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr22:33193208-33259428 (+) // 89.71 // q12.3"]
["11748774_x_at",164.21632,174.39394,172.13007,163.33696,164.22282,165.13626,-0.004058838,0.08269405,0.06384373,-0.011804581,-0.0040006638,0.0040011406,0.40988192,0.12675726,1.0362899,0.051427692,1.0362899,"up","CTSL2",1515,"0006508 // proteolysis // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0009267 // cellular response to starvation // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0010259 // multicellular organismal aging // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0021675 // nerve development // inferred from electronic annotation /// 0034698 // response to gonadotropin stimulus // inferred from electronic annotation /// 0046697 // decidualization // inferred from electronic annotation /// 0048102 // autophagic cell death // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0060008 // Sertoli cell differentiation // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005773 // vacuole // inferred from electronic annotation /// 0005902 // microvillus // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0030141 // secretory granule // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from electronic annotation","0004177 // aminopeptidase activity // inferred from electronic annotation /// 0004197 // cysteine-type endopeptidase activity // inferred from electronic annotation /// 0004197 // cysteine-type endopeptidase activity // traceable author statement /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // traceable author statement /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0030984 // kininogen binding // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation","chr9:99794398-99801406 (-) // 81.74 // q22.33"]
["11733258_a_at",271.05615,213.65137,235.0507,303.08145,269.4635,230.03261,0.10706091,-0.23627234,-0.0985589,0.26817465,0.0985589,-0.12969255,0.67714405,0.36692858,-1.113373,-0.15493706,1.113373,"down","TAOK3",51347,"0000165 // MAPK cascade // inferred from mutant phenotype /// 0006281 // DNA repair // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0031572 // G2/M transition DNA damage checkpoint // inferred from mutant phenotype /// 0032874 // positive regulation of stress-activated MAPK cascade // inferred from mutant phenotype /// 0043507 // positive regulation of JUN kinase activity // inferred from mutant phenotype /// 0046329 // negative regulation of JNK cascade // inferred from direct assay /// 0046330 // positive regulation of JNK cascade // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004860 // protein kinase inhibitor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr12:118587605-118810750 (-) // 95.99 // q24.23"]
["11716570_a_at",122.94594,128.6391,117.6855,128.56714,126.41837,149.96478,-0.052339554,0.012965679,-0.11542702,0.012157917,-0.01215744,0.23426008,0.52297086,0.20912349,-1.0940564,-0.12968707,1.0940564,"down","NOTCH3",4854,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007220 // Notch receptor processing // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0042246 // tissue regeneration // inferred from electronic annotation /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0048663 // neuron fate commitment // inferred from electronic annotation /// 0050793 // regulation of developmental process // inferred from electronic annotation /// 0072104 // glomerular capillary formation // inferred from electronic annotation","0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr19:15270443-15311792 (-) // 87.98 // p13.12"]
["11762513_at",8.882743,8.565898,8.837894,8.034659,7.6888475,8.282929,0.0766325,0.024231672,0.06932998,-0.06813598,-0.13160539,-0.024231672,0.1633284,0.020272903,1.0953479,0.13138914,1.0953479,"up","PTK7",5754,"0001736 // establishment of planar polarity // inferred from electronic annotation /// 0001843 // neural tube closure // inferred from electronic annotation /// 0003401 // axis elongation // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0010976 // positive regulation of neuron projection development // inferred from mutant phenotype /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016477 // cell migration // inferred from mutant phenotype /// 0031532 // actin cytoskeleton reorganization // inferred from mutant phenotype /// 0045198 // establishment of epithelial cell apical/basal polarity // inferred from electronic annotation /// 0060026 // convergent extension // inferred from electronic annotation /// 0060070 // canonical Wnt receptor signaling pathway // inferred from mutant phenotype /// 0060484 // lung-associated mesenchyme development // inferred from electronic annotation /// 0071300 // cellular response to retinoic acid // inferred from mutant phenotype /// 0090103 // cochlea morphogenesis // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0005911 // cell-cell junction // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr6:43044102-43101458 (+) // 74.44 // p21.1"]
["11752124_a_at",697.71454,576.7432,560.90063,671.1567,524.0563,510.55618,0.2947998,0.02009201,-0.02009201,0.23881245,-0.118115425,-0.15576744,0.7900678,0.5296869,1.0791959,0.10995671,1.0791959,"up","SRRT",51593,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from sequence or structural similarity /// 0008283 // cell proliferation // inferred from electronic annotation /// 0031047 // gene silencing by RNA // inferred from electronic annotation /// 0031053 // primary miRNA processing // inferred from mutant phenotype /// 0031053 // primary miRNA processing // inferred from electronic annotation /// 0046685 // response to arsenic-containing substance // non-traceable author statement /// 0097150 // neuronal stem cell maintenance // inferred from sequence or structural similarity","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from sequence or structural similarity /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction","chr7:100472700-100486284 (+) // 99.86 // q22.1"]
["11725679_at",2481.5654,2345.0564,2363.7856,2577.406,2204.5564,2223.1052,0.07588959,-0.0057382584,0.0057382584,0.13055897,-0.094872475,-0.08278465,0.8436489,0.62494373,1.0288239,0.040995996,1.0288239,"up","SMC3",9126,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006275 // regulation of DNA replication // inferred from mutant phenotype /// 0006281 // DNA repair // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007052 // mitotic spindle organization // inferred from expression pattern /// 0007062 // sister chromatid cohesion // inferred from mutant phenotype /// 0007062 // sister chromatid cohesion // non-traceable author statement /// 0007067 // mitosis // traceable author statement /// 0007067 // mitosis // inferred from electronic annotation /// 0007091 // mitotic metaphase/anaphase transition // traceable author statement /// 0007126 // meiosis // inferred from direct assay /// 0007126 // meiosis // inferred from electronic annotation /// 0007165 // signal transduction // inferred from direct assay /// 0009294 // DNA mediated transformation // traceable author statement /// 0032876 // negative regulation of DNA endoreduplication // inferred from mutant phenotype /// 0051276 // chromosome organization // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000785 // chromatin // inferred from direct assay /// 0000800 // lateral element // inferred from electronic annotation /// 0000922 // spindle pole // inferred from direct assay /// 0005604 // basement membrane // inferred from electronic annotation /// 0005604 // basement membrane // traceable author statement /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0008278 // cohesin complex // non-traceable author statement /// 0016363 // nuclear matrix // inferred from direct assay /// 0030893 // meiotic cohesin complex // inferred from direct assay /// 0030893 // meiotic cohesin complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003777 // microtubule motor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0045502 // dynein binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from physical interaction","chr10:112327435-112364392 (+) // 99.16 // q25.2"]
["11715150_s_at",85.70982,99.761604,86.3404,78.780205,79.10892,91.31556,-0.0052876472,0.21373606,0.0052876472,-0.12691545,-0.12090778,0.0861125,0.59868413,0.27873144,1.0906203,0.12514889,1.0906203,"up","PCDHA4",56144,"0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr5:140186671-140189169 (+) // 100.0 // q31.3"]
["11738881_a_at",16.001259,19.23349,16.782923,15.54404,17.167515,19.161379,-0.08515215,0.18028307,-0.016343594,-0.12697601,0.016343594,0.17486382,0.98948133,0.9691718,1.0033689,0.004852061,1.0033689,"up","SLC26A5",375611,"0007605 // sensory perception of sound // inferred from mutant phenotype /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0008272 // sulfate transport // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0042391 // regulation of membrane potential // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016328 // lateral plasma membrane // inferred from electronic annotation","0008271 // secondary active sulfate transmembrane transporter activity // inferred from electronic annotation /// 0015116 // sulfate transmembrane transporter activity // inferred from electronic annotation /// 0030507 // spectrin binding // inferred from electronic annotation","chr7:102993176-103086598 (-) // 86.71 // q22.1"]
["11733188_at",358.39316,347.51636,363.5375,330.5531,380.70578,375.88953,-0.010280609,-0.054742813,0.010280609,-0.12694168,0.0768528,0.05848503,0.91419196,0.7719268,-1.0146952,-0.021046381,1.0146952,"down","INCENP",3619,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0000910 // cytokinesis // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0007059 // chromosome segregation // inferred from mutant phenotype /// 0007059 // chromosome segregation // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from direct assay /// 0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from direct assay /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0000795 // synaptonemal complex // inferred from electronic annotation /// 0000801 // central element // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005721 // centromeric heterochromatin // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005819 // spindle // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0030496 // midbody // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr11:61891427-61920635 (+) // 87.91 // q12.3"]
["11745217_a_at",18.479383,18.734924,18.262196,17.142849,17.864685,18.105907,0.023256302,0.04306984,0.0061998367,-0.085053444,-0.025549889,-0.0061998367,0.30830392,0.07225278,1.0447152,0.06310965,1.0447152,"up","MKL2",57496,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007517 // muscle organ development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0045844 // positive regulation of striated muscle tissue development // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr16:14173144-14360633 (+) // 97.56 // p13.12"]
["11723361_a_at",161.18086,128.82768,113.435616,144.89429,106.821236,100.31146,0.41502237,0.09178448,-0.09178448,0.261343,-0.17845964,-0.26917124,0.71321726,0.41548368,1.1490462,0.20043679,1.1490462,"up","MED12",9968,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0030178 // negative regulation of Wnt receptor signaling pathway // inferred from mutant phenotype /// 0030518 // intracellular steroid hormone receptor signaling pathway // inferred from direct assay /// 0030521 // androgen receptor signaling pathway // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016592 // mediator complex // inferred from direct assay /// 0016592 // mediator complex // inferred from electronic annotation","0001104 // RNA polymerase II transcription cofactor activity // inferred from direct assay /// 0001104 // RNA polymerase II transcription cofactor activity // inferred from electronic annotation /// 0003712 // transcription cofactor activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // traceable author statement /// 0004872 // receptor activity // inferred from direct assay /// 0008013 // beta-catenin binding // inferred from electronic annotation /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // non-traceable author statement /// 0042809 // vitamin D receptor binding // non-traceable author statement /// 0046966 // thyroid hormone receptor binding // inferred from direct assay","chrX:70338262-70362304 (+) // 94.83 // q13.1"]
["11743787_a_at",64.761635,65.69148,63.4047,71.45333,87.06427,69.943726,-0.065811634,-0.045244217,-0.09636116,0.07605028,0.36112976,0.04524374,0.3383159,0.08646562,-1.1727918,-0.22994697,1.1727918,"down","GORAB",92344,"","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:170501262-170522974 (+) // 97.66 // q24.2"]
["11753755_x_at",6445.006,5866.2886,5856.2227,6025.39,5479.224,5417.057,0.13697147,0.0012378693,-0.0012388229,0.039844513,-0.09723854,-0.11370087,0.50988585,0.19871044,1.0737725,0.102688424,1.0737725,"up","ATP5J2",9551,"0006200 // ATP catabolic process // inferred from direct assay /// 0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015992 // proton transport // non-traceable author statement /// 0015992 // proton transport // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0042776 // mitochondrial ATP synthesis coupled proton transport // inferred by curator /// 0042776 // mitochondrial ATP synthesis coupled proton transport // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005739 // mitochondrion // inferred by curator /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005753 // mitochondrial proton-transporting ATP synthase complex // inferred from direct assay /// 0005753 // mitochondrial proton-transporting ATP synthase complex // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045263 // proton-transporting ATP synthase complex, coupling factor F(o) // inferred from electronic annotation","0016887 // ATPase activity // inferred from direct assay /// 0022857 // transmembrane transporter activity // inferred by curator","chr7:99055816-99063784 (-) // 93.49 // q22.1"]
["11760114_s_at",178.97319,191.08057,189.44975,169.63051,159.38335,182.17738,-0.0128006935,0.08163738,0.069271564,-0.09014797,-0.18004274,0.012800217,0.37292793,0.10492789,1.0956849,0.13183294,1.0956849,"up","HERC2P2 /// HERC2P3","283755 /// 400322","0007283 // spermatogenesis // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation","0005743 // mitochondrial inner membrane // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:20643302-20667803 (-) // 97.81 // q11.1"]
["11718453_a_at",70.52115,79.33701,74.57934,79.492905,81.16109,74.89087,-0.12833595,0.041602135,-0.047616005,0.044433594,0.07439613,-0.041602135,0.62540835,0.30601338,-1.0500994,-0.070525855,1.0500994,"down","AXIN2",8313,"0001756 // somitogenesis // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from mutant phenotype /// 0001957 // intramembranous ossification // not recorded /// 0001957 // intramembranous ossification // inferred from electronic annotation /// 0003413 // chondrocyte differentiation involved in endochondral bone morphogenesis // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009950 // dorsal/ventral axis specification // not recorded /// 0010718 // positive regulation of epithelial to mesenchymal transition // inferred from mutant phenotype /// 0010942 // positive regulation of cell death // inferred from mutant phenotype /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0030111 // regulation of Wnt receptor signaling pathway // inferred from electronic annotation /// 0030282 // bone mineralization // inferred from electronic annotation /// 0032423 // regulation of mismatch repair // inferred from mutant phenotype /// 0034613 // cellular protein localization // inferred from direct assay /// 0035414 // negative regulation of catenin import into nucleus // inferred from mutant phenotype /// 0038032 // termination of G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0042476 // odontogenesis // inferred from mutant phenotype /// 0043547 // positive regulation of GTPase activity // not recorded /// 0043570 // maintenance of DNA repeat elements // inferred from mutant phenotype /// 0045668 // negative regulation of osteoblast differentiation // not recorded /// 0045668 // negative regulation of osteoblast differentiation // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from electronic annotation /// 0048255 // mRNA stabilization // inferred from mutant phenotype /// 0061181 // regulation of chondrocyte development // inferred from electronic annotation /// 0070602 // regulation of centromeric sister chromatid cohesion // inferred from mutant phenotype /// 0070602 // regulation of centromeric sister chromatid cohesion // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // not recorded /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from direct assay /// 0090090 // negative regulation of canonical Wnt receptor signaling pathway // inferred from mutant phenotype /// 0090244 // Wnt receptor signaling pathway involved in somitogenesis // not recorded /// 2000054 // negative regulation of Wnt receptor signaling pathway involved in dorsal/ventral axis specification // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // inferred from electronic annotation /// 0005881 // cytoplasmic microtubule // not recorded /// 0005886 // plasma membrane // not recorded /// 0005938 // cell cortex // not recorded /// 0014069 // postsynaptic density // not recorded /// 0016023 // cytoplasmic membrane-bounded vesicle // not recorded /// 0034747 // Axin-APC-beta-catenin-GSK3B complex // not recorded /// 0034747 // Axin-APC-beta-catenin-GSK3B complex // non-traceable author statement /// 0043234 // protein complex // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // not recorded /// 0008013 // beta-catenin binding // not recorded /// 0008013 // beta-catenin binding // non-traceable author statement /// 0008013 // beta-catenin binding // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0019901 // protein kinase binding // not recorded /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from electronic annotation /// 0070016 // armadillo repeat domain binding // not recorded /// 0070411 // I-SMAD binding // inferred from electronic annotation","chr17:63524680-63557766 (-) // 97.67 // q24.1"]
["11745726_x_at",867.9097,800.2506,775.84753,866.5173,841.112,888.3162,0.023781776,-0.09331131,-0.13799,0.021465302,-0.021465302,0.057310104,0.47660443,0.17326374,-1.0630994,-0.088276476,1.0630994,"down","GRN",2896,"0001835 // blastocyst hatching // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007566 // embryo implantation // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005125 // cytokine activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // traceable author statement","chr17:42422490-42430470 (+) // 97.27 // q21.31"]
["11756056_a_at",978.34424,1041.4265,972.69727,1204.0509,1271.8112,1427.0054,-0.19481468,-0.10466766,-0.20316601,0.10466766,0.18365574,0.34976196,0.10785426,0.00849335,-1.3015624,-0.3802445,1.3015624,"down","SLC2A1",6513,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006970 // response to osmotic stress // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0015758 // glucose transport // traceable author statement /// 0015758 // glucose transport // inferred from electronic annotation /// 0019852 // L-ascorbic acid metabolic process // traceable author statement /// 0042149 // cellular response to glucose starvation // inferred from electronic annotation /// 0042908 // xenobiotic transport // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070837 // dehydroascorbic acid transport // inferred from electronic annotation","0001939 // female pronucleus // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005901 // caveola // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0016020 // membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0031982 // vesicle // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation /// 0005355 // glucose transmembrane transporter activity // traceable author statement /// 0005355 // glucose transmembrane transporter activity // inferred from electronic annotation /// 0019900 // kinase binding // inferred from electronic annotation /// 0022857 // transmembrane transporter activity // inferred from electronic annotation /// 0022891 // substrate-specific transmembrane transporter activity // inferred from electronic annotation /// 0033300 // dehydroascorbic acid transporter activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042910 // xenobiotic transporter activity // inferred from electronic annotation /// 0055056 // D-glucose transmembrane transporter activity // inferred from electronic annotation","chr1:43393282-43394973 (-) // 100.0 // p34.2"]
["11732501_a_at",134.28255,123.70773,140.08261,97.396324,103.57975,105.781715,0.23125839,0.11292219,0.29226398,-0.23207474,-0.14327145,-0.11292267,0.07697279,0.0041510877,1.2967536,0.37490442,1.2967536,"up","TMOD1",7111,"0030049 // muscle filament sliding // traceable author statement /// 0030239 // myofibril assembly // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0008180 // signalosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030016 // myofibril // inferred from electronic annotation /// 0030863 // cortical cytoskeleton // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005523 // tropomyosin binding // inferred from electronic annotation","chr9:100286421-100363530 (+) // 94.07 // q22.33"]
["11756345_x_at",47.496033,55.928917,43.15378,57.059055,42.01381,40.831528,0.069159985,0.30494785,-0.069159985,0.3338089,-0.10778332,-0.14896345,0.8857112,0.7086086,1.0540636,0.07596186,1.0540636,"up","TMEM91",641649,"0009607 // response to biotic stimulus // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr19:41882677-41889947 (+) // 63.29 // q13.2"]
["11754216_x_at",573.33167,546.1946,561.66345,601.0564,528.6302,497.55646,0.049809456,-0.020145416,0.020145416,0.11793995,-0.06730175,-0.15470028,0.8130314,0.5695746,1.0361913,0.051290438,1.0361913,"up","ZBTB8OS",339487,"","","","chr1:33086224-33116614 (-) // 79.77 // p35.1"]
["11730371_a_at",8.93726,8.519688,8.8555765,7.34398,9.083984,8.1409,0.041138887,-0.027892828,0.027892828,-0.24213147,0.0646317,-0.09350538,0.6347731,0.31693688,1.074785,0.10404808,1.074785,"up","EIF4E3",317649,"0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005845 // mRNA cap binding complex // inferred from sequence or structural similarity","0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation","chr3:71728271-71803924 (-) // 86.94 // p13"]
["11755290_s_at",231.98462,189.86096,185.18887,189.13092,179.51485,167.77896,0.30983782,0.020751953,-0.015193462,0.015193462,-0.060088158,-0.15762949,0.518511,0.20576592,1.1271193,0.17264023,1.1271193,"up","FBXL18",80028,"","","","chr7:5515427-5520173 (-) // 72.97 // p22.1"]
["11750967_a_at",107.13812,85.275345,98.026276,105.889565,103.397026,103.16784,0.05287838,-0.2763934,-0.075353146,0.03596735,0.0016007423,-0.0016002655,0.6304459,0.3121364,-1.0804348,-0.111612014,1.0804348,"down","ZNF586",54807,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:58280996-58291611 (+) // 99.89 // q13.43"]
["11758970_a_at",268.7118,222.30304,242.9611,333.55627,261.3896,226.40134,0.092596054,-0.18093634,-0.05273819,0.40446663,0.05273819,-0.15458107,0.74490225,0.4603996,-1.107956,-0.14790066,1.107956,"down","PVRL3",25945,"0002089 // lens morphogenesis in camera-type eye // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from sequence or structural similarity /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0009566 // fertilization // inferred from electronic annotation /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0045216 // cell-cell junction organization // traceable author statement /// 0060042 // retina morphogenesis in camera-type eye // inferred from electronic annotation","0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005913 // cell-cell adherens junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043296 // apical junction complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from sequence or structural similarity /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0050839 // cell adhesion molecule binding // inferred from physical interaction","chr3:110790600-110854801 (+) // 91.74 // q13.13"]
["11730993_a_at",5.8468976,6.9718304,8.248034,6.8840895,7.5542774,7.4687557,-0.3035314,-0.049665213,0.19284749,-0.0679369,0.06609106,0.049665213,0.8649177,0.66645676,-1.0492725,-0.06938945,1.0492725,"down","NLGN4X",57502,"0003360 // brainstem development // inferred from sequence or structural similarity /// 0007155 // cell adhesion // inferred from electronic annotation /// 0021549 // cerebellum development // inferred from sequence or structural similarity /// 0035176 // social behavior // inferred from mutant phenotype /// 0045216 // cell-cell junction organization // non-traceable author statement /// 0046622 // positive regulation of organ growth // inferred from sequence or structural similarity /// 0050808 // synapse organization // inferred from mutant phenotype /// 0050808 // synapse organization // non-traceable author statement /// 0071625 // vocalization behavior // inferred from mutant phenotype /// 0071625 // vocalization behavior // inferred from sequence or structural similarity /// 0090394 // negative regulation of excitatory postsynaptic membrane potential // inferred from direct assay /// 0097105 // presynaptic membrane assembly // inferred from direct assay","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030425 // dendrite // inferred from direct assay /// 0045202 // synapse // not recorded /// 0045202 // synapse // inferred from sequence or structural similarity /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0060076 // excitatory synapse // inferred from direct assay","0004091 // carboxylesterase activity // not recorded /// 0004872 // receptor activity // not recorded /// 0005515 // protein binding // inferred from physical interaction /// 0031404 // chloride ion binding // inferred from direct assay /// 0042043 // neurexin family protein binding // inferred from direct assay /// 0042043 // neurexin family protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay","chrX:5808084-6145888 (-) // 97.04 // p22.32"]
["11728698_at",612.2631,599.55646,619.65485,541.15137,478.1737,459.4525,0.104187965,0.073931694,0.12150097,-0.073931694,-0.252429,-0.3100481,0.12910986,0.012563981,1.2414359,0.31200975,1.2414359,"up","HSPA4L",22824,"0006457 // protein folding // inferred from sequence or structural similarity /// 0006950 // response to stress // inferred from electronic annotation /// 0006986 // response to unfolded protein // inferred from sequence or structural similarity /// 0006986 // response to unfolded protein // traceable author statement","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from sequence or structural similarity /// 0005524 // ATP binding // inferred from electronic annotation","chr4:128702950-128755468 (+) // 99.85 // q28.1"]
["11731213_at",20.501287,15.858032,16.911354,16.581594,20.02493,20.099886,0.1558199,-0.21468091,-0.121902466,-0.15031195,0.121902466,0.12729263,0.8039266,0.55317754,-1.0667452,-0.09321557,1.0667452,"down","CCL25",6370,"0006935 // chemotaxis // inferred from electronic annotation /// 0006935 // chemotaxis // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0006955 // immune response // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0050900 // leukocyte migration // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005625 // soluble fraction // traceable author statement","0005125 // cytokine activity // inferred from electronic annotation /// 0005179 // hormone activity // traceable author statement /// 0008009 // chemokine activity // inferred from electronic annotation /// 0008009 // chemokine activity // traceable author statement /// 0031735 // CCR10 chemokine receptor binding // inferred from direct assay","chr19:8117645-8127534 (+) // 85.8 // p13.2"]
["11762518_s_at",31.032972,42.049484,34.8574,44.35364,43.508545,48.30383,-0.46289158,-0.024605274,-0.29522848,0.052359104,0.024605274,0.17544413,0.2909983,0.063967645,-1.2701902,-0.34504458,1.2701902,"down","FLJ39061 /// LOC100652824","100652824 /// 165057","","","","chr2:202938011-203019479 (+) // 96.63 // q33.1"]
["11740334_at",24.782812,24.435095,26.581978,23.407852,20.890203,24.309092,0.024114609,0.0037293434,0.12522316,-0.058232784,-0.22239876,-0.0037293434,0.4092643,0.12635775,1.1063511,0.14580934,1.1063511,"up","TUBAL3",79861,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0007017 // microtubule-based process // inferred from electronic annotation /// 0007018 // microtubule-based movement // inferred from electronic annotation /// 0051258 // protein polymerization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005198 // structural molecule activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr10:5435061-5446795 (-) // 98.57 // p15.1"]
["11724676_a_at",114.69659,109.574066,124.34735,141.1101,131.78513,110.98324,-0.058276176,-0.12419224,0.058276176,0.24072218,0.14208841,-0.10575724,0.6316495,0.31331196,-1.0971407,-0.13374852,1.0971407,"down","KLHL2",11275,"0006886 // intracellular protein transport // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement","0003779 // actin binding // inferred from electronic annotation /// 0005215 // transporter activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr4:166128769-166244299 (+) // 95.53 // q32.3"]
["11746786_a_at",344.64572,376.51495,358.92065,360.61392,359.73538,384.21237,-0.06358147,0.064011574,-0.005030632,0.0017595291,-0.0017595291,0.09320831,0.7935012,0.5361102,-1.0228559,-0.03260288,1.0228559,"down","STXBP1",6812,"0002576 // platelet degranulation // inferred from mutant phenotype /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006887 // exocytosis // inferred from electronic annotation /// 0006904 // vesicle docking involved in exocytosis // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007269 // neurotransmitter secretion // traceable author statement /// 0007269 // neurotransmitter secretion // inferred from electronic annotation /// 0007274 // neuromuscular synaptic transmission // inferred from electronic annotation /// 0007412 // axon target recognition // inferred from sequence or structural similarity /// 0007412 // axon target recognition // inferred from electronic annotation /// 0010807 // regulation of synaptic vesicle priming // inferred from sequence or structural similarity /// 0014047 // glutamate secretion // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016188 // synaptic vesicle maturation // inferred from sequence or structural similarity /// 0016188 // synaptic vesicle maturation // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0032229 // negative regulation of synaptic transmission, GABAergic // inferred from sequence or structural similarity /// 0032229 // negative regulation of synaptic transmission, GABAergic // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement /// 0060292 // long term synaptic depression // inferred from electronic annotation /// 0070527 // platelet aggregation // inferred from mutant phenotype","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0031091 // platelet alpha granule // inferred from direct assay /// 0043234 // protein complex // inferred from sequence or structural similarity","0000149 // SNARE binding // inferred from sequence or structural similarity /// 0017075 // syntaxin-1 binding // inferred from sequence or structural similarity /// 0017075 // syntaxin-1 binding // inferred from electronic annotation /// 0019905 // syntaxin binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from sequence or structural similarity","chr9:130374555-130453470 (+) // 98.72 // q34.11"]
["11738048_a_at",60.737766,77.02281,61.673424,52.448326,60.035816,58.475967,0.008385181,0.35107708,0.03044033,-0.20331144,-0.008385181,-0.046364307,0.46041915,0.16109776,1.1614989,0.21598779,1.1614989,"up","ELOVL7",79993,"0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0019367 // fatty acid elongation, saturated fatty acid // inferred from direct assay /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0034626 // fatty acid elongation, polyunsaturated fatty acid // inferred from direct assay /// 0035338 // long-chain fatty-acyl-CoA biosynthetic process // traceable author statement /// 0042761 // very long-chain fatty acid biosynthetic process // inferred from direct assay /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016747 // transferase activity, transferring acyl groups other than amino-acyl groups // inferred from electronic annotation","chr5:60047616-60140216 (-) // 86.79 // q12.1"]
["11718655_s_at",1710.3389,1923.8728,1995.0745,2247.851,2433.8706,2334.9912,-0.30821228,-0.13848114,-0.08605194,0.08605194,0.20075798,0.14092255,0.13040361,0.012834852,-1.2484684,-0.3201593,1.2484684,"down","CHMP5",51510,"0001919 // regulation of receptor recycling // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007040 // lysosome organization // inferred from electronic annotation /// 0008333 // endosome to lysosome transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0016197 // endosomal transport // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr9:33264876-33281511 (+) // 97.99 // p13.3"]
["11731645_a_at",514.4508,620.3778,628.7214,435.44077,614.282,637.09125,-0.26299095,0.0071229935,0.026396751,-0.50354767,-0.0071229935,0.04547596,0.88705003,0.7121362,1.0559741,0.078574486,1.0559741,"up","CAMKK2",10645,"0000165 // MAPK cascade // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019722 // calcium-mediated signaling // traceable author statement /// 0045859 // regulation of protein kinase activity // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // traceable author statement /// 0046777 // protein autophosphorylation // inferred from direct assay","0005622 // intracellular // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004683 // calmodulin-dependent protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0005509 // calcium ion binding // inferred from direct assay /// 0005516 // calmodulin binding // traceable author statement /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr12:121675499-121736111 (-) // 90.72 // q24.31"]
["11730393_at",9.76491,10.201409,11.7201185,10.717351,13.098437,11.240155,-0.16862679,-0.10553646,0.09468174,-0.034356833,0.25508928,0.034356833,0.6067574,0.28689158,-1.105621,-0.1448569,1.105621,"down","GPR4",2828,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement","chr19:46093021-46105466 (-) // 84.3 // q13.32"]
["11720844_at",378.61145,404.27603,433.6555,352.44238,350.95032,347.7358,0.051665306,0.14628792,0.2474966,-0.051665306,-0.057785988,-0.071061134,0.16786599,0.021363664,1.1556096,0.2086541,1.1556096,"up","N4BP1",9683,"0031397 // negative regulation of protein ubiquitination // inferred from sequence or structural similarity /// 0031397 // negative regulation of protein ubiquitination // inferred from electronic annotation /// 0032435 // negative regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0032435 // negative regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from sequence or structural similarity /// 0005730 // nucleolus // inferred from electronic annotation /// 0016605 // PML body // inferred from sequence or structural similarity /// 0016605 // PML body // inferred from electronic annotation","","chr16:48572636-48644125 (-) // 87.76 // q12.1"]
["11760764_at",18.770508,20.339676,20.073755,19.941952,20.061895,20.087301,-0.09641647,0.019412518,0.00042629242,-0.009077549,-0.00042629242,0.0013995171,0.8082443,0.56064117,-1.0159465,-0.022824442,1.0159465,"down","ADAMTS16",170690,"0006508 // proteolysis // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:5140442-5223840 (+) // 86.89 // p15.32"]
["11727057_a_at",156.45761,148.9952,158.22287,176.6226,159.88956,167.77852,-0.023745537,-0.094251156,-0.0075588226,0.15115261,0.0075588226,0.07704115,0.30523908,0.07085477,-1.0870633,-0.12043597,1.0870633,"down","RRP8",23378,"0000183 // chromatin silencing at rDNA // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006364 // rRNA processing // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0042149 // cellular response to glucose starvation // inferred from mutant phenotype /// 0046015 // regulation of transcription by glucose // inferred from mutant phenotype /// 0071158 // positive regulation of cell cycle arrest // inferred from mutant phenotype /// 0072332 // signal transduction by p53 class mediator resulting in induction of apoptosis // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005677 // chromatin silencing complex // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0033553 // rDNA heterochromatin // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008757 // S-adenosylmethionine-dependent methyltransferase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0035064 // methylated histone residue binding // inferred from direct assay","chr11:6616304-6624880 (-) // 65.43 // p15.4"]
["11752473_x_at",198.0831,197.38315,203.72467,193.95099,202.07562,207.32979,-0.01439476,-0.019501686,0.026120186,-0.044808865,0.01439476,0.05142641,0.91518354,0.775989,-1.0066737,-0.00959612,1.0066737,"down","MED24",9862,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016573 // histone acetylation // inferred from electronic annotation /// 0030518 // intracellular steroid hormone receptor signaling pathway // inferred from direct assay /// 0030521 // androgen receptor signaling pathway // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0051291 // protein heterooligomerization // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016592 // mediator complex // non-traceable author statement /// 0016592 // mediator complex // inferred from electronic annotation","0001104 // RNA polymerase II transcription cofactor activity // inferred from direct assay /// 0003712 // transcription cofactor activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0030374 // ligand-dependent nuclear receptor transcription coactivator activity // non-traceable author statement /// 0042809 // vitamin D receptor binding // non-traceable author statement /// 0046966 // thyroid hormone receptor binding // inferred from direct assay","chr17:38179384-38210661 (-) // 99.95 // q21.1"]
["11742515_at",19.011705,24.715385,21.761406,23.03683,22.193129,27.954367,-0.2501397,0.12838173,-0.05525589,0.026914597,-0.026914597,0.306046,0.6593953,0.34437865,-1.1180773,-0.1610199,1.1180773,"down","OR51T1",401665,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:4903048-4904113 (+) // 100.0 // p15.4"]
["11741192_a_at",282.91562,276.97632,264.5201,248.75562,220.18637,213.70929,0.14131832,0.11070919,0.04432392,-0.044324398,-0.22032785,-0.26340437,0.1606751,0.019585224,1.2098286,0.27480268,1.2098286,"up","RBKS",64080,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006014 // D-ribose metabolic process // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0019303 // D-ribose catabolic process // inferred from electronic annotation","","0000166 // nucleotide binding // inferred from electronic annotation /// 0004747 // ribokinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation","chr2:28004265-28113284 (-) // 99.84 // p23.2"]
["11759281_at",244.26494,222.33037,197.54005,326.26474,289.72287,238.98186,0.015773296,-0.119968414,-0.29052782,0.43336964,0.26200008,-0.01577282,0.3377881,0.086117335,-1.2817427,-0.35810667,1.2817427,"down","SERINC5",256987,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006658 // phosphatidylserine metabolic process // inferred from sequence or structural similarity /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0051347 // positive regulation of transferase activity // inferred from sequence or structural similarity","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr5:79441912-79551870 (-) // 71.53 // q14.1"]
["11755786_a_at",178.52507,145.4267,134.38951,164.12766,148.3493,153.8895,0.24068022,-0.0551548,-0.1690259,0.11937189,-0.026447773,0.02644825,0.9269472,0.8039923,-1.0240535,-0.034291025,1.0240535,"down","FGFR3",2261,"0000165 // MAPK cascade // traceable author statement /// 0001501 // skeletal system development // traceable author statement /// 0001958 // endochondral ossification // traceable author statement /// 0002062 // chondrocyte differentiation // traceable author statement /// 0003416 // endochondral bone growth // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007259 // JAK-STAT cascade // traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008284 // positive regulation of cell proliferation // inferred from mutant phenotype /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from direct assay /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from genetic interaction /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from mutant phenotype /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // inferred from electronic annotation /// 0010518 // positive regulation of phospholipase activity // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0035988 // chondrocyte proliferation // traceable author statement /// 0042511 // positive regulation of tyrosine phosphorylation of Stat1 protein // inferred from mutant phenotype /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from mutant phenotype /// 0042981 // regulation of apoptotic process // inferred from mutant phenotype /// 0043410 // positive regulation of MAPK cascade // inferred from mutant phenotype /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from mutant phenotype /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // traceable author statement /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048640 // negative regulation of developmental growth // inferred from sequence or structural similarity /// 0060349 // bone morphogenesis // traceable author statement /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from mutant phenotype /// 0070977 // bone maturation // inferred from sequence or structural similarity","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // traceable author statement /// 0005925 // focal adhesion // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016023 // cytoplasmic membrane-bounded vesicle // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from mutant phenotype /// 0005007 // fibroblast growth factor-activated receptor activity // inferred from electronic annotation /// 0005007 // fibroblast growth factor-activated receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017134 // fibroblast growth factor binding // inferred from direct assay /// 0017134 // fibroblast growth factor binding // inferred from physical interaction","chr4:1795033-1810592 (+) // 95.61 // p16.3"]
["11722500_a_at",70.378136,71.31236,68.288704,63.728947,57.131104,62.379406,0.09332895,0.11235428,0.049849033,-0.049849033,-0.20752144,-0.08072853,0.15646164,0.01861999,1.1470093,0.19787703,1.1470093,"up","LYSMD3",116068,"0016998 // cell wall macromolecule catabolic process // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr5:89811442-89825405 (-) // 94.76 // q14.3"]
["11758932_at",26.761559,31.213287,24.432001,23.328215,26.761559,29.397036,0,0.22199821,-0.1313901,-0.19808626,0,0.13550854,0.89832455,0.7364243,1.0360272,0.05106187,1.0360272,"up","CHAF1B /// MORC3","23515 /// 8208","0006260 // DNA replication // inferred from electronic annotation /// 0006281 // DNA repair // inferred from electronic annotation /// 0006335 // DNA replication-dependent nucleosome assembly // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006461 // protein complex assembly // traceable author statement /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007569 // cell aging // inferred from direct assay /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0031497 // chromatin assembly // inferred from direct assay /// 0048147 // negative regulation of fibroblast proliferation // inferred from direct assay /// 0050821 // protein stabilization // inferred from direct assay /// 0051457 // maintenance of protein location in nucleus // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005678 // chromatin assembly complex // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0016235 // aggresome // inferred from direct assay /// 0016605 // PML body // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation /// 0033186 // CAF-1 complex // inferred from direct assay /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0003682 // chromatin binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0042393 // histone binding // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // traceable author statement","chr21:37756487-37789124 (+) // 95.78 // q22.12"]
["11748208_a_at",84.81341,80.94214,67.50975,66.48673,64.10708,77.891464,0.22601223,0.15861082,-0.10318422,-0.12521362,-0.17779636,0.1031847,0.61211014,0.29219446,1.1176136,0.16042142,1.1176136,"up","ZNF317",57693,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:9251058-9272109 (+) // 97.24 // p13.2"]
["11721791_a_at",30.217875,32.031925,33.91448,30.787514,27.224493,25.438194,-0.013471603,0.07063675,0.15302753,0.013471603,-0.16396856,-0.26187754,0.34837246,0.09145406,1.1547035,0.20752245,1.1547035,"up","PTPRD",5789,"0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006796 // phosphate-containing compound metabolic process // non-traceable author statement /// 0007157 // heterophilic cell-cell adhesion // inferred from sequence or structural similarity /// 0007185 // transmembrane receptor protein tyrosine phosphatase signaling pathway // traceable author statement /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from sequence or structural similarity /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0050775 // positive regulation of dendrite morphogenesis // inferred from sequence or structural similarity /// 0097105 // presynaptic membrane assembly // inferred from sequence or structural similarity","0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005001 // transmembrane receptor protein tyrosine phosphatase activity // traceable author statement /// 0005102 // receptor binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0050839 // cell adhesion molecule binding // inferred from sequence or structural similarity","chr9:8314246-10612509 (-) // 96.91 // p24.1"]
["11730997_at",15.619259,22.640217,18.758705,16.99578,16.640587,20.632402,-0.19304252,0.34251928,0.07119179,-0.07119179,-0.10166216,0.2085433,0.9070464,0.75365925,1.0436658,0.061659764,1.0436658,"up","LRRN1",57633,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:3841085-3889900 (+) // 97.23 // p26.2"]
["11761071_at",11.87748,15.829851,11.495983,10.791152,12.759335,15.858179,-0.051662207,0.36275697,-0.09876084,-0.19004202,0.051662207,0.36533618,0.9940077,0.9832013,-1.0033842,-0.0048741726,1.0033842,"down","HLA-DOB",3112,"0002504 // antigen processing and presentation of peptide or polysaccharide antigen via MHC class II // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0031295 // T cell costimulation // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042613 // MHC class II protein complex // inferred from electronic annotation","0032395 // MHC class II receptor activity // traceable author statement","chr6:32781741-32784854 (-) // 99.56 // p21.32"]
["11750894_a_at",12.782386,17.482529,13.193051,12.169433,14.01079,14.831032,-0.08900118,0.36275554,-0.043380022,-0.15989637,0.043380022,0.12546062,0.87217957,0.6809386,1.0524925,0.07380995,1.0524925,"up","TBX5",6910,"0002009 // morphogenesis of an epithelium // inferred from electronic annotation /// 0003166 // bundle of His development // inferred from electronic annotation /// 0003181 // atrioventricular valve morphogenesis // inferred from electronic annotation /// 0003197 // endocardial cushion development // inferred from electronic annotation /// 0003218 // cardiac left ventricle formation // inferred from sequence or structural similarity /// 0003218 // cardiac left ventricle formation // inferred from electronic annotation /// 0003229 // ventricular cardiac muscle tissue development // inferred from electronic annotation /// 0003281 // ventricular septum development // inferred from sequence or structural similarity /// 0003281 // ventricular septum development // inferred from electronic annotation /// 0003283 // atrial septum development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006917 // induction of apoptosis // inferred from direct assay /// 0007267 // cell-cell signaling // inferred from direct assay /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0007507 // heart development // inferred from direct assay /// 0007507 // heart development // inferred from mutant phenotype /// 0007507 // heart development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0010467 // gene expression // traceable author statement /// 0010719 // negative regulation of epithelial to mesenchymal transition // traceable author statement /// 0030324 // lung development // inferred from electronic annotation /// 0030326 // embryonic limb morphogenesis // inferred from mutant phenotype /// 0030326 // embryonic limb morphogenesis // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from direct assay /// 0035115 // embryonic forelimb morphogenesis // inferred from electronic annotation /// 0035117 // embryonic arm morphogenesis // inferred from mutant phenotype /// 0035136 // forelimb morphogenesis // inferred from mutant phenotype /// 0035136 // forelimb morphogenesis // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051891 // positive regulation of cardioblast differentiation // inferred from direct assay /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0060039 // pericardium development // inferred from direct assay /// 0060044 // negative regulation of cardiac muscle cell proliferation // inferred from direct assay /// 0060045 // positive regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0060980 // cell migration involved in coronary vasculogenesis // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement","0000977 // RNA polymerase II regulatory region sequence-specific DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay","chr12:114792810-114845846 (-) // 96.13 // q24.21"]
["11753871_a_at",25.048456,22.094126,23.827085,23.683887,23.897247,24.782682,0.069998264,-0.11106062,-0.0021209717,-0.010817528,0.0021209717,0.054608822,0.84420216,0.625747,-1.0207988,-0.029698541,1.0207988,"down","GNG7",2788,"0001662 // behavioral fear response // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007168 // receptor guanylyl cyclase signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045761 // regulation of adenylate cyclase activity // inferred from electronic annotation /// 0071377 // cellular response to glucagon stimulus // traceable author statement","0005834 // heterotrimeric G-protein complex // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation","chr19:2515019-2520686 (-) // 100.0 // p13.3"]
["11719097_a_at",2069.3887,1855.4795,1802.5166,2167.0322,1827.9296,1837.7068,0.16435528,0.006942749,-0.03483677,0.2308712,-0.014638901,-0.006942749,0.93489724,0.8216194,-1.0169693,-0.024276162,1.0169693,"down","TAF10",6881,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006352 // transcription initiation, DNA-dependent // inferred from direct assay /// 0006352 // transcription initiation, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // inferred by curator /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred by curator /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006368 // transcription elongation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016578 // histone deubiquitination // inferred from direct assay /// 0043966 // histone H3 acetylation // inferred from direct assay /// 0051260 // protein homooligomerization // inferred from direct assay","0000125 // PCAF complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005669 // transcription factor TFIID complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0030914 // STAGA complex // inferred from direct assay /// 0033276 // transcription factor TFTC complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0004402 // histone acetyltransferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0019899 // enzyme binding // inferred from physical interaction /// 0030331 // estrogen receptor binding // inferred from direct assay /// 0070063 // RNA polymerase binding // inferred from direct assay","chr11:6632075-6633900 (-) // 75.39 // p15.4"]
["11730479_a_at",61.27397,61.656204,60.4618,50.227463,58.635036,55.221348,0.041380882,0.050352573,0.02213049,-0.24541712,-0.02213049,-0.10866737,0.29810494,0.06727353,1.119892,0.16335961,1.119892,"up","DRD2",1813,"0001659 // temperature homeostasis // inferred from electronic annotation /// 0001659 // temperature homeostasis // inferred from sequence or structural similarity /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001963 // synaptic transmission, dopaminergic // inferred from electronic annotation /// 0001964 // startle response // inferred from electronic annotation /// 0001975 // response to amphetamine // inferred from electronic annotation /// 0001975 // response to amphetamine // inferred from sequence or structural similarity /// 0001976 // neurological system process involved in regulation of systemic arterial blood pressure // inferred from electronic annotation /// 0001976 // neurological system process involved in regulation of systemic arterial blood pressure // inferred from sequence or structural similarity /// 0002027 // regulation of heart rate // inferred from electronic annotation /// 0002027 // regulation of heart rate // inferred from sequence or structural similarity /// 0002028 // regulation of sodium ion transport // inferred from electronic annotation /// 0002028 // regulation of sodium ion transport // inferred from sequence or structural similarity /// 0002031 // G-protein coupled receptor internalization // inferred from electronic annotation /// 0002052 // positive regulation of neuroblast proliferation // inferred from electronic annotation /// 0002052 // positive regulation of neuroblast proliferation // inferred from sequence or structural similarity /// 0002092 // positive regulation of receptor internalization // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred by curator /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007188 // adenylate cyclase-modulating G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007194 // negative regulation of adenylate cyclase activity // inferred from direct assay /// 0007194 // negative regulation of adenylate cyclase activity // inferred from electronic annotation /// 0007195 // adenylate cyclase-inhibiting dopamine receptor signaling pathway // inferred from direct assay /// 0007195 // adenylate cyclase-inhibiting dopamine receptor signaling pathway // inferred from electronic annotation /// 0007212 // dopamine receptor signaling pathway // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // inferred from direct assay /// 0007270 // neuron-neuron synaptic transmission // inferred from sequence or structural similarity /// 0007270 // neuron-neuron synaptic transmission // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from electronic annotation /// 0007409 // axonogenesis // inferred from sequence or structural similarity /// 0007416 // synapse assembly // inferred from electronic annotation /// 0007416 // synapse assembly // inferred from sequence or structural similarity /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from sequence or structural similarity /// 0007616 // long-term memory // inferred from electronic annotation /// 0007625 // grooming behavior // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from sequence or structural similarity /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0007628 // adult walking behavior // inferred from electronic annotation /// 0007628 // adult walking behavior // inferred from sequence or structural similarity /// 0007631 // feeding behavior // inferred from electronic annotation /// 0008104 // protein localization // inferred from electronic annotation /// 0008104 // protein localization // inferred from sequence or structural similarity /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from sequence or structural similarity /// 0008306 // associative learning // inferred from sequence or structural similarity /// 0008306 // associative learning // inferred from electronic annotation /// 0008542 // visual learning // inferred from electronic annotation /// 0008542 // visual learning // inferred from sequence or structural similarity /// 0009416 // response to light stimulus // inferred from sequence or structural similarity /// 0009416 // response to light stimulus // inferred from electronic annotation /// 0009636 // response to toxin // inferred from electronic annotation /// 0010039 // response to iron ion // inferred from electronic annotation /// 0014059 // regulation of dopamine secretion // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0021853 // cerebral cortex GABAergic interneuron migration // inferred from electronic annotation /// 0021853 // cerebral cortex GABAergic interneuron migration // inferred from sequence or structural similarity /// 0021984 // adenohypophysis development // inferred from electronic annotation /// 0021984 // adenohypophysis development // inferred from sequence or structural similarity /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from sequence or structural similarity /// 0030432 // peristalsis // inferred from electronic annotation /// 0030432 // peristalsis // inferred from sequence or structural similarity /// 0030534 // adult behavior // inferred from electronic annotation /// 0030814 // regulation of cAMP metabolic process // inferred from direct assay /// 0030900 // forebrain development // inferred from electronic annotation /// 0031223 // auditory behavior // inferred from electronic annotation /// 0032147 // activation of protein kinase activity // inferred from electronic annotation /// 0032228 // regulation of synaptic transmission, GABAergic // inferred from electronic annotation /// 0032228 // regulation of synaptic transmission, GABAergic // inferred from sequence or structural similarity /// 0032922 // circadian regulation of gene expression // inferred from electronic annotation /// 0032922 // circadian regulation of gene expression // inferred from sequence or structural similarity /// 0034776 // response to histamine // inferred from direct assay /// 0035094 // response to nicotine // inferred from electronic annotation /// 0035810 // positive regulation of urine volume // inferred from electronic annotation /// 0035815 // positive regulation of renal sodium excretion // inferred from electronic annotation /// 0040018 // positive regulation of multicellular organism growth // inferred from electronic annotation /// 0042220 // response to cocaine // inferred from sequence or structural similarity /// 0042220 // response to cocaine // inferred from electronic annotation /// 0042321 // negative regulation of circadian sleep/wake cycle, sleep // inferred from electronic annotation /// 0042417 // dopamine metabolic process // inferred by curator /// 0042417 // dopamine metabolic process // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042493 // response to drug // inferred from sequence or structural similarity /// 0043266 // regulation of potassium ion transport // inferred from electronic annotation /// 0043266 // regulation of potassium ion transport // inferred from sequence or structural similarity /// 0043278 // response to morphine // inferred from electronic annotation /// 0043278 // response to morphine // inferred from sequence or structural similarity /// 0043408 // regulation of MAPK cascade // inferred from electronic annotation /// 0043473 // pigmentation // inferred from electronic annotation /// 0043666 // regulation of phosphoprotein phosphatase activity // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045745 // positive regulation of G-protein coupled receptor protein signaling pathway // inferred from electronic annotation /// 0045776 // negative regulation of blood pressure // inferred from electronic annotation /// 0045776 // negative regulation of blood pressure // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046488 // phosphatidylinositol metabolic process // inferred from electronic annotation /// 0046488 // phosphatidylinositol metabolic process // inferred from sequence or structural similarity /// 0046676 // negative regulation of insulin secretion // inferred from electronic annotation /// 0046717 // acid secretion // inferred from electronic annotation /// 0048148 // behavioral response to cocaine // inferred from electronic annotation /// 0048148 // behavioral response to cocaine // inferred from sequence or structural similarity /// 0048149 // behavioral response to ethanol // inferred from electronic annotation /// 0048149 // behavioral response to ethanol // inferred from sequence or structural similarity /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from sequence or structural similarity /// 0048678 // response to axon injury // inferred from electronic annotation /// 0048755 // branching morphogenesis of a nerve // inferred from electronic annotation /// 0048755 // branching morphogenesis of a nerve // inferred from sequence or structural similarity /// 0050482 // arachidonic acid secretion // inferred from direct assay /// 0050709 // negative regulation of protein secretion // inferred from direct assay /// 0050804 // regulation of synaptic transmission // inferred from electronic annotation /// 0051209 // release of sequestered calcium ion into cytosol // inferred from electronic annotation /// 0051209 // release of sequestered calcium ion into cytosol // inferred from sequence or structural similarity /// 0051481 // reduction of cytosolic calcium ion concentration // inferred from electronic annotation /// 0051482 // elevation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway // inferred from direct assay /// 0051584 // regulation of dopamine uptake involved in synaptic transmission // inferred by curator /// 0051584 // regulation of dopamine uptake involved in synaptic transmission // inferred from electronic annotation /// 0051586 // positive regulation of dopamine uptake involved in synaptic transmission // inferred from electronic annotation /// 0051586 // positive regulation of dopamine uptake involved in synaptic transmission // inferred from sequence or structural similarity /// 0051898 // negative regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0051898 // negative regulation of protein kinase B signaling cascade // inferred from sequence or structural similarity /// 0051927 // negative regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from direct assay /// 0051927 // negative regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from electronic annotation /// 0051967 // negative regulation of synaptic transmission, glutamatergic // inferred from electronic annotation /// 0051967 // negative regulation of synaptic transmission, glutamatergic // inferred from sequence or structural similarity /// 0060124 // positive regulation of growth hormone secretion // inferred from electronic annotation /// 0060124 // positive regulation of growth hormone secretion // inferred from sequence or structural similarity /// 0060134 // prepulse inhibition // inferred from electronic annotation /// 0060134 // prepulse inhibition // inferred from sequence or structural similarity /// 0060158 // phospholipase C-activating dopamine receptor signaling pathway // inferred from electronic annotation /// 0060158 // phospholipase C-activating dopamine receptor signaling pathway // inferred from genetic interaction /// 0060160 // negative regulation of dopamine receptor signaling pathway // inferred from electronic annotation /// 0060160 // negative regulation of dopamine receptor signaling pathway // inferred from sequence or structural similarity /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from electronic annotation","0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred by curator /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016328 // lateral plasma membrane // inferred from electronic annotation /// 0019861 // flagellum // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0030424 // axon // inferred from sequence or structural similarity /// 0030424 // axon // inferred from electronic annotation /// 0030425 // dendrite // inferred from sequence or structural similarity /// 0030425 // dendrite // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0043204 // perikaryon // inferred from electronic annotation /// 0043679 // axon terminus // inferred from electronic annotation","0001591 // dopamine receptor activity, coupled via Gi/Go // inferred from direct assay /// 0001591 // dopamine receptor activity, coupled via Gi/Go // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004952 // dopamine receptor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008144 // drug binding // inferred from direct assay /// 0008144 // drug binding // inferred from electronic annotation /// 0015459 // potassium channel regulator activity // non-traceable author statement /// 0035240 // dopamine binding // inferred from electronic annotation /// 0035255 // ionotropic glutamate receptor binding // inferred from electronic annotation","chr11:113280335-113346111 (-) // 93.96 // q23.2"]
["11759920_at",49.393303,54.524338,57.15003,53.903816,57.556812,47.991222,-0.13432837,0.008256435,0.07611036,-0.008256435,0.08634281,-0.17587328,0.9574621,0.8794036,1.0111113,0.015941756,1.0111113,"up","PHC3",80012,"0007275 // multicellular organismal development // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0031519 // PcG protein complex // inferred from direct assay /// 0035102 // PRC1 complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:169887507-169896726 (-) // 70.66 // q26.2"]
["11740041_at",41.924313,34.16937,32.279568,38.86245,41.28558,37.413467,0.13681984,-0.15826368,-0.24034595,0.027409554,0.11467075,-0.027409554,0.67210627,0.3609711,-1.0908757,-0.12548678,1.0908757,"down","ATP10A",57194,"0006812 // cation transport // inferred from electronic annotation /// 0008360 // regulation of cell shape // non-traceable author statement /// 0015914 // phospholipid transport // inferred from electronic annotation /// 0034220 // ion transmembrane transport // traceable author statement /// 0045332 // phospholipid translocation // non-traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000287 // magnesium ion binding // inferred from electronic annotation /// 0004012 // phospholipid-translocating ATPase activity // non-traceable author statement /// 0004012 // phospholipid-translocating ATPase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:25922419-26108870 (-) // 98.24 // q12"]
["11738645_a_at",56.130474,80.07848,74.5101,60.01848,72.30008,105.06712,-0.3869319,0.12569809,0.021719456,-0.29030895,-0.021718979,0.5175228,0.8462445,0.6295363,-1.1082908,-0.14833646,1.1082908,"down","SLC26A5",375611,"0007605 // sensory perception of sound // inferred from mutant phenotype /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0008272 // sulfate transport // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0042391 // regulation of membrane potential // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016328 // lateral plasma membrane // inferred from electronic annotation","0008271 // secondary active sulfate transmembrane transporter activity // inferred from electronic annotation /// 0015116 // sulfate transmembrane transporter activity // inferred from electronic annotation /// 0030507 // spectrin binding // inferred from electronic annotation","chr7:102993111-103086598 (-) // 87.62 // q22.1"]
["11722217_x_at",538.50964,426.142,427.81204,505.4987,459.05664,487.6853,0.18666077,-0.15097713,-0.14533424,0.09539604,-0.043639183,0.043639183,0.82848996,0.59577155,-1.048516,-0.06834892,1.048516,"down","GPR108",56927,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr19:6729924-6737620 (-) // 93.86 // p13.3"]
["11725016_at",6.5403476,6.987333,7.3274527,5.680094,5.998783,6.159321,0.043298006,0.13867259,0.20724249,-0.16015458,-0.08139944,-0.043298006,0.15650456,0.018635947,1.1685249,0.22468843,1.1685249,"up","MAP9",79884,"0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation","","chr4:156263809-156298122 (-) // 85.16 // q32.1"]
["11731209_s_at",83.36168,109.497604,102.92469,79.60067,105.87504,110.96233,-0.32451963,0.06892347,-0.020386696,-0.39112282,0.020386696,0.088094234,0.99676186,0.99129874,1.0015397,0.0022196195,1.0015397,"up","C15orf59",388135,"","","","chr15:74032140-74043943 (-) // 92.13 // q24.1"]
["11737403_at",154.95938,186.0904,160.02538,151.29074,200.62663,191.10374,-0.15526247,0.10885143,-0.10885191,-0.18982887,0.21736097,0.1472044,0.77389795,0.5033336,-1.079228,-0.10999974,1.079228,"down","TMEM89",440955,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:48658191-48659288 (-) // 99.85 // p21.31"]
["11717927_at",420.5118,350.5112,354.22287,447.73236,378.72284,417.3711,0.08090973,-0.18177605,-0.16657925,0.17140007,-0.07009411,0.07009411,0.5750688,0.2551793,-1.1067135,-0.14628184,1.1067135,"down","FOXK2",3607,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0007389 // pattern specification process // not recorded /// 0009790 // embryo development // not recorded /// 0009888 // tissue development // not recorded /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // not recorded","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // not recorded /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0000287 // magnesium ion binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // not recorded /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // not recorded /// 0008134 // transcription factor binding // not recorded /// 0008301 // DNA binding, bending // not recorded /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:80477593-80562483 (+) // 92.44 // q25.3"]
["11740095_a_at",8.498357,8.004452,8.13201,7.702431,6.8525963,7.4145255,0.11412573,0.027744293,0.050554037,-0.027744293,-0.19640756,-0.08270359,0.23237473,0.04103664,1.1222752,0.16642654,1.1222752,"up","LRRC2",79442,"","","","chr3:46556879-46608040 (-) // 69.36 // p21.31"]
["11729289_a_at",17.603073,19.089102,19.494942,20.076363,21.325157,19.494942,-0.14727259,-0.030350685,0,0.042397976,0.12945652,0,0.39693606,0.119038284,-1.0840961,-0.116492614,1.0840961,"down","BMX",660,"0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0007498 // mesoderm development // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0032587 // ruffle membrane // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from direct assay /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:15518697-15574652 (+) // 99.11 // p22.2"]
["11757788_s_at",21.05216,31.532045,34.185703,28.746075,31.276024,31.32152,-0.57213736,0.0107131,0.12728739,-0.122740746,-0.0010485649,0.0010485649,0.863084,0.661901,-1.0745993,-0.103798755,1.0745993,"down","DDR2",4921,"0001503 // ossification // inferred from electronic annotation /// 0003416 // endochondral bone growth // inferred from electronic annotation /// 0003416 // endochondral bone growth // inferred from sequence or structural similarity /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0010715 // regulation of extracellular matrix disassembly // traceable author statement /// 0010763 // positive regulation of fibroblast migration // inferred from electronic annotation /// 0010763 // positive regulation of fibroblast migration // inferred from sequence or structural similarity /// 0010763 // positive regulation of fibroblast migration // traceable author statement /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0030199 // collagen fibril organization // inferred from sequence or structural similarity /// 0030500 // regulation of bone mineralization // inferred from mutant phenotype /// 0031214 // biomineral tissue development // inferred from sequence or structural similarity /// 0035988 // chondrocyte proliferation // inferred from electronic annotation /// 0035988 // chondrocyte proliferation // inferred from sequence or structural similarity /// 0035988 // chondrocyte proliferation // traceable author statement /// 0038063 // collagen-activated tyrosine kinase receptor signaling pathway // inferred from direct assay /// 0045669 // positive regulation of osteoblast differentiation // inferred from mutant phenotype /// 0045860 // positive regulation of protein kinase activity // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0048146 // positive regulation of fibroblast proliferation // inferred from electronic annotation /// 0048146 // positive regulation of fibroblast proliferation // inferred from sequence or structural similarity /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0090091 // positive regulation of extracellular matrix disassembly // inferred from electronic annotation /// 0090091 // positive regulation of extracellular matrix disassembly // inferred from sequence or structural similarity","0005887 // integral to plasma membrane // traceable author statement","0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from direct assay /// 0005518 // collagen binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0038062 // protein tyrosine kinase collagen receptor activity // inferred from direct assay /// 0038062 // protein tyrosine kinase collagen receptor activity // inferred from electronic annotation","chr1:162755999-162756409 (+) // 97.85 // q23.3 /// chr10:38640803-38641213 (+) // 96.42 // p11.1"]
["11754175_x_at",10.173225,8.767021,10.173225,10.478689,9.956336,9.466025,0.015545368,-0.19907331,0.015545368,0.05822611,-0.01554513,-0.08840132,0.8565763,0.6496115,-1.0286514,-0.040754087,1.0286514,"down","LOC100508797",100508797,"","","","chr14:106174931-106586667 (-) // 80.2 // q32.33"]
["11747205_a_at",133.41069,136.38953,132.74113,115.22904,120.69401,119.98916,0.075888634,0.107747555,0.068630695,-0.1354804,-0.068630695,-0.07708168,0.05342409,0.0018290506,1.1311733,0.17781991,1.1311733,"up","PDK2",5164,"0000160 // two-component signal transduction system (phosphorelay) // inferred from electronic annotation /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006006 // glucose metabolic process // inferred from electronic annotation /// 0006006 // glucose metabolic process // traceable author statement /// 0006090 // pyruvate metabolic process // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0010510 // regulation of acetyl-CoA biosynthetic process from pyruvate // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018106 // peptidyl-histidine phosphorylation // inferred from electronic annotation /// 0023014 // signal transduction by phosphorylation // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // traceable author statement /// 0005759 // mitochondrial matrix // inferred from electronic annotation /// 0045254 // pyruvate dehydrogenase complex // inferred from electronic annotation","0000155 // two-component sensor activity // inferred from electronic annotation /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004673 // protein histidine kinase activity // inferred from electronic annotation /// 0004740 // pyruvate dehydrogenase (acetyl-transferring) kinase activity // inferred from electronic annotation /// 0004740 // pyruvate dehydrogenase (acetyl-transferring) kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr17:48172739-48187763 (+) // 99.8 // q21.33"]
["11736506_at",6.6406918,6.3018775,5.8931727,5.962253,6.338616,6.794092,0.07135892,-0.004192829,-0.100929976,-0.084116936,0.0041930676,0.10430622,0.9278674,0.8058446,-1.0135252,-0.019382028,1.0135252,"down","TECRL",253017,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016627 // oxidoreductase activity, acting on the CH-CH group of donors // inferred from electronic annotation","chr4:65143424-65275398 (-) // 57.91 // q13.1"]
["11739050_s_at",18.233095,12.539173,15.901808,18.311018,16.84693,15.807076,0.15572119,-0.38439584,-0.041647434,0.16187382,0.041647434,-0.050267696,0.7391569,0.45125914,-1.1028159,-0.14119193,1.1028159,"down","ACPP",55,"","0005576 // extracellular region // inferred from electronic annotation /// 0005622 // intracellular // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0003993 // acid phosphatase activity // inferred from electronic annotation /// 0008253 // 5'-nucleotidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr3:132036212-132077761 (+) // 83.09 // q22.1"]
["11720766_a_at",2712.1064,2429.7393,2302.5562,2564.5034,2429.7393,2085.6816,0.15861225,0,-0.07756519,0.077878,0,-0.22028255,0.79988307,0.5463131,1.0529842,0.07448384,1.0529842,"up","METTL9",51108,"","","0005515 // protein binding // inferred from physical interaction","chr16:21610697-21669144 (+) // 98.5 // p12.2"]
["11715194_s_at",52.317867,60.744953,56.263855,50.28741,58.625404,63.68117,-0.13456297,0.080898285,-0.029658318,-0.19166946,0.029658794,0.14899969,0.9469011,0.85175115,-1.0163782,-0.023437286,1.0163782,"down","ZNF835",90485,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:57174952-57176628 (-) // 99.4 // q13.43"]
["11738629_a_at",519.38324,505.8898,485.38992,435.2258,499.88028,503.16968,0.05048561,0.012509346,-0.047169685,-0.20454979,-0.0047311783,0.0047311783,0.6842162,0.3765925,1.0522361,0.073458426,1.0522361,"up","ACPL2",92370,"","0005576 // extracellular region // inferred from electronic annotation","0003993 // acid phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr3:140950681-141013745 (+) // 90.58 // q23"]
["11736841_a_at",15.741392,15.017467,14.555492,12.806596,12.683716,15.248129,0.09046078,0.0225389,-0.0225389,-0.20721555,-0.22112513,0.044529676,0.46227735,0.16213165,1.1158094,0.15809067,1.1158094,"up","KLRAP1",10748,"0007166 // cell surface receptor signaling pathway // traceable author statement","0005886 // plasma membrane // traceable author statement","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation /// 0030246 // carbohydrate binding // traceable author statement","chr12:10741055-10752661 (-) // 68.51 // p13.2"]
["11763922_at",65.80744,62.594654,64.13067,62.781815,73.72212,69.122406,0.018618107,-0.053593636,-0.018618584,-0.04928541,0.18246508,0.08952093,0.5812501,0.26142427,-1.0659193,-0.09209819,1.0659193,"down","SNORA71C",677839,"","","","chr20:37058094-37058448 (-) // 99.72 // q11.23"]
["11740396_a_at",19.987581,22.478558,21.05216,15.974612,22.17677,24.44907,-0.11240482,0.05704069,-0.037540436,-0.43572807,0.037540436,0.17827082,0.94098663,0.8363332,1.0297809,0.042337365,1.0297809,"up","NLRP12",91662,"0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // non-traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0008588 // release of cytoplasmic sequestered NF-kappaB // inferred from direct assay /// 0009968 // negative regulation of signal transduction // inferred from direct assay /// 0031953 // negative regulation of protein autophosphorylation // inferred from direct assay /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0043124 // negative regulation of I-kappaB kinase/NF-kappaB cascade // inferred from direct assay /// 0045381 // regulation of interleukin-18 biosynthetic process // non-traceable author statement /// 0045409 // negative regulation of interleukin-6 biosynthetic process // inferred from direct assay /// 0045751 // negative regulation of Toll signaling pathway // inferred from direct assay /// 0050710 // negative regulation of cytokine secretion // inferred from direct assay /// 0050711 // negative regulation of interleukin-1 secretion // inferred from direct assay /// 0050718 // positive regulation of interleukin-1 beta secretion // non-traceable author statement /// 0050728 // negative regulation of inflammatory response // inferred from mutant phenotype /// 0050729 // positive regulation of inflammatory response // non-traceable author statement","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008656 // cysteine-type endopeptidase activator activity involved in apoptotic process // non-traceable author statement","chr19:54296856-54327648 (-) // 92.23 // q13.42"]
["11733820_at",36.513794,46.80051,41.56006,36.83366,46.3716,49.241043,-0.26577806,0.09230471,-0.07902193,-0.2531948,0.07902193,0.16564178,0.8553208,0.6465353,-1.0579866,-0.08132137,1.0579866,"down","CHRNA2",1135,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // non-traceable author statement /// 0006811 // ion transport // inferred from electronic annotation /// 0007165 // signal transduction // inferred from direct assay /// 0007268 // synaptic transmission // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005892 // acetylcholine-gated channel complex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004889 // acetylcholine-activated cation-selective channel activity // inferred from direct assay /// 0004889 // acetylcholine-activated cation-selective channel activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0015464 // acetylcholine receptor activity // inferred from direct assay","chr8:27317278-27336813 (-) // 96.06 // p21.2"]
["11745788_a_at",20.890493,20.267763,21.343287,19.881413,18.39364,20.815527,0.024423122,-0.019236565,0.055358887,-0.04700327,-0.1592164,0.019236565,0.5326264,0.21729906,1.0588583,0.0825095,1.0588583,"up","MUC12",10071,"0001558 // regulation of cell growth // non-traceable author statement /// 0016266 // O-glycan processing // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005796 // Golgi lumen // traceable author statement /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr7:100634912-100662230 (+) // 99.25 // q22.1"]
["11758936_at",51.824104,54.7889,62.29384,60.388046,69.889565,66.87283,-0.24305296,-0.16279268,0.022413254,-0.02241373,0.18840075,0.12474394,0.34293324,0.08874635,-1.1685513,-0.2247211,1.1685513,"down","HNRNPR",10236,"0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030530 // heterogeneous nuclear ribonucleoprotein complex // traceable author statement /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr1:23630893-23670857 (-) // 97.44 // p36.12"]
["11721984_at",83.60167,77.53144,84.459175,76.82808,77.86277,79.0561,0.091626644,-0.0171237,0.10634899,-0.030271053,-0.010971546,0.010971546,0.4571877,0.15899526,1.0499891,0.070374355,1.0499891,"up","C7orf29",113763,"","","","chr7:150026875-150029810 (+) // 95.13 // q36.1"]
["11742951_at",1320.4602,1264.4219,1201.1073,1441.0614,1334.7932,1279.6802,0.022628784,-0.03993416,-0.11404705,0.14871979,0.038204193,-0.022628784,0.5084797,0.1975448,-1.0706962,-0.09854923,1.0706962,"down","MED10",84246,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016592 // mediator complex // inferred from electronic annotation","0001104 // RNA polymerase II transcription cofactor activity // inferred from electronic annotation","chr5:6371997-6378707 (-) // 94.9 // p15.31"]
["11730253_a_at",240.41011,250.23839,270.58926,299.80853,342.25848,298.8641,-0.24230003,-0.18449354,-0.07169247,0.076244354,0.26728916,0.07169247,0.1633284,0.02027924,-1.235051,-0.30457065,1.235051,"down","AHCTF1",25909,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0000910 // cytokinesis // inferred from mutant phenotype /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation /// 0051292 // nuclear pore complex assembly // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from direct assay /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from direct assay /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016363 // nuclear matrix // inferred from electronic annotation /// 0031080 // nuclear pore outer ring // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation","chr1:247002399-247094665 (-) // 99.34 // q44"]
["11754846_a_at",36.007668,36.28937,37.15072,36.98405,39.587917,34.60911,-0.02492094,-0.013678074,0.020164967,0.013678074,0.111835,-0.08207321,0.8994423,0.7383655,-1.0143986,-0.020624623,1.0143986,"down","MLLT10",8028,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:21823677-21962972 (+) // 96.47 // p12.31"]
["11749165_a_at",11.9245615,13.161998,12.643723,10.401312,12.407074,11.404266,-0.02861309,0.113829136,0.055871964,-0.22578359,0.028613329,-0.09297562,0.4637163,0.16337702,1.1047689,0.14374457,1.1047689,"up","GLT1D1",144423,"0009058 // biosynthetic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay","0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr12:129338038-129468597 (+) // 97.42 // q24.33"]
["11740509_a_at",34.21774,32.10926,39.70257,29.16821,35.302193,39.055702,-0.022506714,-0.11426163,0.19198132,-0.25285435,0.022506714,0.16828203,0.9301871,0.811209,1.0274676,0.039092913,1.0274676,"up","ARHGAP26",23092,"0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007399 // nervous system development // non-traceable author statement /// 0030036 // actin cytoskeleton organization // non-traceable author statement /// 0032321 // positive regulation of Rho GTPase activity // non-traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0046847 // filopodium assembly // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008093 // cytoskeletal adaptor activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation","chr5:142149967-142608572 (+) // 86.49 // q31.3"]
["11720817_a_at",16.59608,18.758705,17.159004,16.120672,18.656065,16.863827,-0.035606384,0.14111137,0.012516975,-0.07753706,0.13319588,-0.012516975,0.91494304,0.7750389,1.0174515,0.02496006,1.0174515,"up","BAALC",79870,"","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","","chr8:104152602-104242700 (+) // 89.78 // q22.3"]
["11727412_a_at",115.68544,123.55625,113.69682,96.88957,108.26326,104.86018,0.060339928,0.15530014,0.03532362,-0.19545507,-0.035324097,-0.08140087,0.21513565,0.035242636,1.138958,0.18771452,1.138958,"up","CLN8",2055,"0001306 // age-dependent response to oxidative stress // inferred from electronic annotation /// 0006644 // phospholipid metabolic process // inferred from mutant phenotype /// 0006644 // phospholipid metabolic process // inferred from electronic annotation /// 0006672 // ceramide metabolic process // inferred from mutant phenotype /// 0006869 // lipid transport // non-traceable author statement /// 0007006 // mitochondrial membrane organization // inferred from electronic annotation /// 0007040 // lysosome organization // inferred from electronic annotation /// 0007399 // nervous system development // inferred from mutant phenotype /// 0007601 // visual perception // inferred from electronic annotation /// 0007628 // adult walking behavior // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from mutant phenotype /// 0008219 // cell death // inferred from electronic annotation /// 0008306 // associative learning // inferred from electronic annotation /// 0008344 // adult locomotory behavior // inferred from electronic annotation /// 0008361 // regulation of cell size // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // non-traceable author statement /// 0021522 // spinal cord motor neuron differentiation // inferred from electronic annotation /// 0021523 // somatic motor neuron differentiation // inferred from electronic annotation /// 0030163 // protein catabolic process // non-traceable author statement /// 0035176 // social behavior // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0044257 // cellular protein catabolic process // inferred from electronic annotation /// 0044265 // cellular macromolecule catabolic process // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // inferred from electronic annotation /// 0045494 // photoreceptor cell maintenance // inferred from electronic annotation /// 0045861 // negative regulation of proteolysis // non-traceable author statement /// 0046513 // ceramide biosynthetic process // non-traceable author statement /// 0050881 // musculoskeletal movement // inferred from electronic annotation /// 0050884 // neuromuscular process controlling posture // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation /// 0051348 // negative regulation of transferase activity // inferred from electronic annotation /// 0051935 // glutamate uptake involved in synaptic transmission // inferred from electronic annotation /// 0060041 // retina development in camera-type eye // inferred from electronic annotation /// 0060052 // neurofilament cytoskeleton organization // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation","","chr8:1711869-1734735 (+) // 76.41 // p23.3"]
["11753574_at",12.274865,12.192625,12.38348,11.059758,10.500818,10.931323,0.0800426,0.07034469,0.09275246,-0.07034445,-0.14516282,-0.08719635,0.049329404,0.0015159841,1.1344144,0.1819478,1.1344144,"up","RAB9BP1",9366,"","","","chr5:104435174-104435799 (+) // 98.56 // q21.2"]
["11728962_at",36.57005,32.95593,37.235588,36.316547,35.24948,37.81719,0.0050177574,-0.14510679,0.03103733,-0.0050177574,-0.048042774,0.05339718,0.8248075,0.5896124,-1.0255961,-0.03646274,1.0255961,"down","CTU1",90353,"0002098 // tRNA wobble uridine modification // non-traceable author statement /// 0008033 // tRNA processing // inferred from electronic annotation /// 0034227 // tRNA thio-modification // non-traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structural similarity","0000049 // tRNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr19:51600862-51611666 (-) // 82.0 // q13.41"]
["11760501_a_at",162.89282,173.01558,190.4423,130.98662,154.22203,159.38951,0.015683174,0.10266209,0.24111366,-0.29882002,-0.06323099,-0.015683174,0.34157616,0.088044286,1.1856934,0.24573098,1.1856934,"up","WSB1",26118,"0016310 // phosphorylation // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation","chr17:25621139-25635216 (+) // 98.48 // q11.1"]
["11750810_a_at",16.416601,23.438795,18.699873,20.244558,18.630703,22.57042,-0.24512577,0.26861715,-0.057252884,0.057252884,-0.06259918,0.21415186,0.8618478,0.6593904,-1.0576452,-0.08085574,1.0576452,"down","PTPN5",84867,"0006470 // protein dephosphorylation // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0001784 // phosphotyrosine binding // inferred from direct assay /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // traceable author statement /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr11:18750112-18793619 (-) // 97.15 // p15.1"]
["11715931_s_at",1816.119,1731.7347,1771.0568,1995.8896,2093.2202,2012.5564,-0.068086624,-0.13672733,-0.10433483,0.068086624,0.13677883,0.08008385,0.060374033,0.0024090945,-1.147133,-0.19803266,1.147133,"down","SGK1",6446,"0001558 // regulation of cell growth // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006814 // sodium ion transport // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006950 // response to stress // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007154 // cell communication // inferred from electronic annotation /// 0007616 // long-term memory // traceable author statement /// 0008217 // regulation of blood pressure // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030334 // regulation of cell migration // traceable author statement /// 0032411 // positive regulation of transporter activity // traceable author statement /// 0042127 // regulation of cell proliferation // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0050790 // regulation of catalytic activity // traceable author statement /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement /// 0060453 // regulation of gastric acid secretion // traceable author statement /// 0070294 // renal sodium ion absorption // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005246 // calcium channel regulator activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0015459 // potassium channel regulator activity // traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017080 // sodium channel regulator activity // traceable author statement /// 0017081 // chloride channel regulator activity // traceable author statement /// 0035091 // phosphatidylinositol binding // inferred from electronic annotation","chr6:134490385-134639250 (-) // 96.41 // q23.2"]
["11738437_at",6.8410716,6.6870337,6.8410716,8.061458,7.5773573,7.84249,-0.07373619,-0.10659218,-0.07373619,0.16308212,0.07373643,0.12335324,0.053835474,0.0018778929,-1.152483,-0.20474546,1.152483,"down","SRY",6736,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007548 // sex differentiation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030238 // male sex determination // non-traceable author statement /// 0030238 // male sex determination // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement /// 2000020 // positive regulation of male gonad development // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0008134 // transcription factor binding // inferred from physical interaction","chrY:2654895-2655792 (-) // 100.0 // p11.31"]
["11751033_a_at",97.955635,96.521355,89.757095,85.63705,83.29524,85.62872,0.15999794,0.13871717,0.033895493,-0.033895493,-0.07389641,-0.034035683,0.15583798,0.018460784,1.1158522,0.158146,1.1158522,"up","ABHD8",79575,"0008152 // metabolic process // inferred from electronic annotation","","0003824 // catalytic activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr19:17403185-17414235 (-) // 96.93 // p13.11"]
["11754934_a_at",1042.4652,971.8412,934.3899,1159.519,998.79224,1062.7229,0.030871391,-0.07033539,-0.12703133,0.18439865,-0.030871391,0.05863762,0.4849684,0.17942642,-1.0914303,-0.12622,1.0914303,"down","PTGES2",80142,"0001516 // prostaglandin biosynthetic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0045454 // cell redox homeostasis // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0046903 // secretion // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0015035 // protein disulfide oxidoreductase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0050220 // prostaglandin-E synthase activity // inferred from electronic annotation","chr9:130882972-130890008 (-) // 93.97 // q34.11"]
["11743646_at",8.296664,7.3439813,8.180305,8.011301,7.604564,9.954616,0.035435915,-0.14053321,0.015058994,-0.015058994,-0.09023023,0.29827,0.77955633,0.5122001,-1.0675766,-0.094339654,1.0675766,"down","C17orf105",284067,"","","","chr17:41857802-42647782 (+) // 29.4 // q21.31"]
["11761040_at",17.718145,16.205832,16.77842,17.226023,18.098207,19.289667,0.020318985,-0.10839558,-0.058301926,-0.020318985,0.05093813,0.14291954,0.44755068,0.15169336,-1.076717,-0.10663913,1.076717,"down","UPP1",7378,"0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0006206 // pyrimidine base metabolic process // traceable author statement /// 0006220 // pyrimidine nucleotide metabolic process // inferred from electronic annotation /// 0009116 // nucleoside metabolic process // inferred from electronic annotation /// 0009166 // nucleotide catabolic process // inferred from electronic annotation /// 0043097 // pyrimidine nucleoside salvage // traceable author statement /// 0044206 // UMP salvage // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046108 // uridine metabolic process // inferred from electronic annotation /// 0046135 // pyrimidine nucleoside catabolic process // traceable author statement /// 0055086 // nucleobase-containing small molecule metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004850 // uridine phosphorylase activity // inferred from electronic annotation /// 0004850 // uridine phosphorylase activity // traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016763 // transferase activity, transferring pentosyl groups // inferred from electronic annotation","chr7:48128823-48143567 (+) // 93.31 // p12.3"]
["11757055_x_at",179.07787,195.65154,180.50105,175.97377,175.64871,202.7467,-0.005709648,0.12198925,0.005709648,-0.030936718,-0.033604145,0.17338133,0.98597497,0.9588203,1.0030426,0.0043828487,1.0030426,"up","SH3BP5L",80851,"","","","chr1:249104649-249105099 (-) // 100.0 // q44"]
["11721915_a_at",279.13696,333.1409,330.0487,355.36526,375.36038,384.40594,-0.30174446,-0.046585083,-0.060038567,0.046585083,0.12555885,0.15991306,0.25944382,0.05086552,-1.1865792,-0.24680842,1.1865792,"down","MDM4",4194,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006461 // protein complex assembly // inferred from direct assay /// 0006915 // apoptotic process // inferred from expression pattern /// 0008283 // cell proliferation // inferred from expression pattern /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0042177 // negative regulation of protein catabolic process // inferred from mutant phenotype /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045023 // G0 to G1 transition // inferred from expression pattern /// 0050821 // protein stabilization // inferred from expression pattern /// 0071157 // negative regulation of cell cycle arrest // inferred from electronic annotation /// 0071456 // cellular response to hypoxia // inferred from expression pattern","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // traceable author statement /// 0019899 // enzyme binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:204485510-204527248 (+) // 61.4 // q32.1"]
["11742058_a_at",70.88955,63.16276,65.0843,64.19448,63.67612,64.58325,0.13876867,-0.027730465,0.015504837,-0.0043554306,-0.016052246,0.0043549538,0.7005528,0.3975827,1.0334954,0.047532003,1.0334954,"up","ECE2",9718,"0006508 // proteolysis // inferred from electronic annotation /// 0007267 // cell-cell signaling // traceable author statement /// 0007420 // brain development // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from sequence or structural similarity /// 0008152 // metabolic process // inferred from electronic annotation /// 0010002 // cardioblast differentiation // inferred from sequence or structural similarity /// 0016486 // peptide hormone processing // inferred from direct assay /// 0032259 // methylation // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from direct assay","0003824 // catalytic activity // inferred from electronic annotation /// 0004222 // metalloendopeptidase activity // inferred from direct assay /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:183993798-184010818 (+) // 96.6 // q27.1"]
["11761324_at",28.29218,34.019077,35.557545,24.794586,32.20408,31.554054,-0.17213106,0.093809605,0.15762138,-0.36250925,0.014708996,-0.014708996,0.70470315,0.40324798,1.1074716,0.14726968,1.1074716,"up","LOC100507646",100507646,"","","","chr19:40779395-40781458 (-) // 46.94 // q13.2"]
["11763385_x_at",701.06177,530.23865,535.09814,653.106,572.40576,518.21313,0.34112072,-0.061779022,-0.048617363,0.23889637,0.048617363,-0.094875336,0.9798307,0.94192284,1.0088385,0.012695288,1.0088385,"up","RPL7L1",285855,"0006412 // translation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from electronic annotation","chr6:42851188-42857179 (+) // 77.1 // p21.1"]
["11748231_a_at",52.635323,31.327888,28.523172,46.633564,43.616386,33.91234,0.45269108,-0.29589272,-0.43120575,0.2780285,0.18153,-0.18153,0.8204958,0.5826276,-1.1361437,-0.1841453,1.1361437,"down","UNC13B",10497,"0006887 // exocytosis // inferred from electronic annotation /// 0006917 // induction of apoptosis // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007588 // excretion // traceable author statement /// 0016081 // synaptic vesicle docking involved in exocytosis // inferred from electronic annotation /// 0016082 // synaptic vesicle priming // inferred from electronic annotation /// 0035249 // synaptic transmission, glutamatergic // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0048172 // regulation of short-term neuronal synaptic plasticity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0004871 // signal transducer activity // traceable author statement /// 0004872 // receptor activity // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:35162100-35404051 (+) // 99.62 // p13.3"]
["11723314_x_at",618.15295,723.3234,743.2823,734.7369,688.75586,641.8217,-0.19135284,0.035324097,0.074593544,0.05791092,-0.035324097,-0.13714409,0.97101074,0.9175771,1.0076822,0.011040723,1.0076822,"up","PXMP2",5827,"","0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005777 // peroxisome // inferred from electronic annotation /// 0005778 // peroxisomal membrane // inferred from direct assay /// 0005778 // peroxisomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr12:133264125-133281571 (+) // 97.22 // q24.33"]
["11720695_at",17.190544,17.820932,17.651133,16.89289,19.461702,19.910694,-0.045051575,0.0069060326,-0.0069060326,-0.07025051,0.13397121,0.1668768,0.6119477,0.2920302,-1.0657604,-0.0918831,1.0657604,"down","C1orf54",79630,"","0005576 // extracellular region // inferred from electronic annotation","","chr1:150240826-150253327 (+) // 93.53 // q21.2"]
["11717330_at",588.22253,522.1296,497.921,595.5924,542.28546,537.5785,0.1235981,-0.048356056,-0.11684704,0.14156151,0.0062885284,-0.0062885284,0.7820121,0.51583195,-1.0432287,-0.061055526,1.0432287,"down","BMS1",9790,"0006184 // GTP catabolic process // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0042255 // ribosome assembly // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from sequence or structural similarity /// 0005730 // nucleolus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr10:43277951-43330385 (+) // 87.09 // q11.21"]
["11733573_at",17.306559,16.384836,20.195164,16.744913,20.43566,19.826153,-0.098042965,-0.17700052,0.124648094,-0.14563894,0.14172697,0.098042965,0.80563277,0.5561691,-1.0581241,-0.08150879,1.0581241,"down","DMRT3",58524,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007548 // sex differentiation // non-traceable author statement /// 0007548 // sex differentiation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:976963-991732 (+) // 94.19 // p24.3"]
["11725257_at",410.1891,424.2557,436.64157,618.7891,640.038,605.80676,-0.32636452,-0.2777195,-0.23620415,0.2667942,0.31550407,0.23620415,0.017883934,9.184798e-5,-1.4670624,-0.5529302,1.4670624,"down","FZD10",11211,"0001944 // vasculature development // not recorded /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007420 // brain development // not recorded /// 0008406 // gonad development // not recorded /// 0009790 // embryo development // not recorded /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from sequence or structural similarity /// 0032855 // positive regulation of Rac GTPase activity // inferred from mutant phenotype /// 0032956 // regulation of actin cytoskeleton organization // inferred from mutant phenotype /// 0034259 // negative regulation of Rho GTPase activity // inferred from mutant phenotype /// 0038031 // non-canonical Wnt receptor signaling pathway via JNK cascade // inferred from mutant phenotype /// 0043507 // positive regulation of JUN kinase activity // inferred from mutant phenotype /// 0060070 // canonical Wnt receptor signaling pathway // not recorded /// 0071300 // cellular response to retinoic acid // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // not recorded /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042995 // cell projection // not recorded","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0017147 // Wnt-protein binding // not recorded /// 0017147 // Wnt-protein binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // not recorded /// 0042813 // Wnt-activated receptor activity // not recorded /// 0042813 // Wnt-activated receptor activity // traceable author statement","chr12:130647003-130650279 (+) // 96.07 // q24.33"]
["11756198_x_at",4169.2656,4211.775,4376.7085,3347.6343,3448.098,3386.8894,0.13699532,0.1516304,0.20704842,-0.17965698,-0.13699627,-0.16283703,0.02279028,0.00019193756,1.252712,0.3250548,1.252712,"up","SEC11A",23478,"0006112 // energy reserve metabolic process // traceable author statement /// 0006412 // translation // traceable author statement /// 0006465 // signal peptide processing // inferred from electronic annotation /// 0006508 // proteolysis // inferred from electronic annotation /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr15:85212774-85259691 (-) // 91.26 // q25.3"]
["11723586_a_at",343.27106,357.11493,392.54092,349.5558,339.38956,350.69357,-0.028518677,0.028521538,0.16497612,-0.0023441315,-0.044924736,0.0023441315,0.62350374,0.30370483,1.0496933,0.069967926,1.0496933,"up","GRB14",2888,"0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0046627 // negative regulation of insulin receptor signaling pathway // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005792 // microsome // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005070 // SH3/SH2 adaptor activity // inferred from electronic annotation /// 0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0051219 // phosphoprotein binding // inferred from electronic annotation","chr2:165349322-165478452 (-) // 93.21 // q24.3"]
["11760416_at",26.673138,17.564117,18.692791,19.618965,18.808508,24.15039,0.47357035,-0.12918615,-0.03933525,0.030431747,-0.030431747,0.33022928,0.99032444,0.9711776,-1.0058348,-0.008393399,1.0058348,"down","TMEM39B",55116,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:32538575-32568465 (+) // 78.59 // p35.1"]
["11741811_at",14.208188,14.003034,14.645908,12.959035,12.061268,16.614586,0.01049161,-0.01049161,0.05426693,-0.12227225,-0.22584915,0.23621964,0.88828295,0.7150177,1.0391396,0.05538952,1.0391396,"up","NME9",347736,"0006165 // nucleoside diphosphate phosphorylation // inferred from electronic annotation /// 0006183 // GTP biosynthetic process // inferred from electronic annotation /// 0006228 // UTP biosynthetic process // inferred from electronic annotation /// 0006241 // CTP biosynthetic process // inferred from electronic annotation /// 0045454 // cell redox homeostasis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0004550 // nucleoside diphosphate kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation","chr3:137980278-138048728 (-) // 89.78 // q22.3"]
["11740647_a_at",96.83041,102.57873,112.722916,106.94,95.55623,118.80434,-0.113235,-0.030035019,0.10601425,0.030035019,-0.13234472,0.18182087,0.9020049,0.74344414,-1.0273461,-0.038922336,1.0273461,"down","CREBBP",1387,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001666 // response to hypoxia // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006461 // protein complex assembly // traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008589 // regulation of smoothened signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016573 // histone acetylation // inferred from direct assay /// 0016573 // histone acetylation // inferred from electronic annotation /// 0018076 // N-terminal peptidyl-lysine acetylation // inferred from direct assay /// 0030718 // germ-line stem cell maintenance // inferred from electronic annotation /// 0033261 // regulation of S phase // inferred from electronic annotation /// 0042592 // homeostatic process // non-traceable author statement /// 0042733 // embryonic digit morphogenesis // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0000123 // histone acetyltransferase complex // inferred from electronic annotation /// 0000790 // nuclear chromatin // inferred from direct assay /// 0000940 // condensed chromosome outer kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0016604 // nuclear body // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation","0000987 // core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0001085 // RNA polymerase II transcription factor binding // inferred from physical interaction /// 0001102 // RNA polymerase II activating transcription factor binding // traceable author statement /// 0001105 // RNA polymerase II transcription coactivator activity // traceable author statement /// 0001191 // RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0002039 // p53 binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003712 // transcription cofactor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from physical interaction /// 0003713 // transcription coactivator activity // traceable author statement /// 0004402 // histone acetyltransferase activity // inferred from direct assay /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016407 // acetyltransferase activity // inferred from direct assay /// 0016407 // acetyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0042975 // peroxisome proliferator activated receptor binding // inferred from electronic annotation /// 0043426 // MRF binding // inferred from direct assay /// 0046332 // SMAD binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:3775054-3930121 (-) // 96.91 // p13.3"]
["11718032_a_at",292.56757,212.6152,215.87839,207.72289,176.38557,181.72424,0.47731686,0.016792297,0.038765907,-0.016792774,-0.25272036,-0.20970201,0.38654068,0.11285939,1.2634455,0.33736342,1.2634455,"up","ATP6V0A1",535,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0033572 // transferrin transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0000220 // vacuolar proton-transporting V-type ATPase, V0 domain // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0033177 // proton-transporting two-sector ATPase complex, proton-transporting domain // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation /// 0051117 // ATPase binding // inferred from physical interaction","chr17:40610862-40674597 (+) // 93.48 // q21.2"]
["11758626_s_at",1445.7673,1629.248,1762.121,2022.5536,2442.784,1907.1952,-0.34254742,-0.1701765,-0.05706978,0.14179516,0.41414356,0.05706978,0.24108928,0.044147234,-1.3142751,-0.39426732,1.3142751,"down","UBA2",10054,"0006464 // cellular protein modification process // inferred from electronic annotation /// 0016925 // protein sumoylation // inferred from direct assay /// 0016925 // protein sumoylation // inferred from electronic annotation /// 0043085 // positive regulation of catalytic activity // traceable author statement","0005634 // nucleus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008047 // enzyme activator activity // traceable author statement /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0008641 // small protein activating enzyme activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0019948 // SUMO activating enzyme activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from physical interaction","chr19:34960451-34960797 (+) // 98.86 // q13.11 /// chr6:142384515-142384859 (+) // 95.43 // q24.1"]
["11722791_s_at",106.39355,102.24038,101.16084,102.26654,75.288635,74.865974,0.065103054,0.007657051,-0.007657051,0.0080266,-0.43380356,-0.44192553,0.37712967,0.107363045,1.2405115,0.31093514,1.2405115,"up","LOC100506558 /// MATN2","100506558 /// 4147","","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0031012 // extracellular matrix // inferred from direct assay /// 0031012 // extracellular matrix // inferred from sequence or structural similarity","0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr8:98881310-99048933 (+) // 86.29 // q22.1"]
["11746339_a_at",19.347126,20.40675,18.293028,21.332418,20.281017,19.535326,-0.040988445,0.03593874,-0.121813774,0.09993982,0.027022362,-0.027022362,0.5859342,0.26615256,-1.0538,-0.07560106,1.0538,"down","MTSS1",9788,"0006928 // cellular component movement // non-traceable author statement /// 0007015 // actin filament organization // inferred from electronic annotation /// 0007155 // cell adhesion // non-traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0030035 // microspike assembly // non-traceable author statement /// 0030036 // actin cytoskeleton organization // traceable author statement /// 0030041 // actin filament polymerization // inferred from electronic annotation /// 0046847 // filopodium assembly // inferred from electronic annotation /// 0050680 // negative regulation of epithelial cell proliferation // inferred from sequence or structural similarity /// 0061333 // renal tubule morphogenesis // inferred from sequence or structural similarity /// 0071498 // cellular response to fluid shear stress // inferred from sequence or structural similarity /// 0072102 // glomerulus morphogenesis // inferred from sequence or structural similarity /// 0072160 // nephron tubule epithelial cell differentiation // inferred from sequence or structural similarity /// 2001013 // epithelial cell proliferation involved in renal tubule morphogenesis // inferred from sequence or structural similarity","0001726 // ruffle // non-traceable author statement /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from direct assay /// 0030139 // endocytic vesicle // traceable author statement","0003779 // actin binding // inferred from electronic annotation /// 0003785 // actin monomer binding // inferred from direct assay /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008093 // cytoskeletal adaptor activity // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation","chr8:125563030-125740379 (-) // 99.93 // q24.13"]
["11740684_at",22.193121,28.52602,26.447842,25.27172,23.892027,27.959448,-0.22022438,0.14194155,0.032813072,-0.032813072,-0.11380768,0.11299896,0.99182266,0.9765214,-1.0027412,-0.0039493307,1.0027412,"down","HEPHL1",341208,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006825 // copper ion transport // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005507 // copper ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:93754377-93847374 (+) // 95.42 // q21"]
["11726612_a_at",37.512115,47.540916,37.971478,45.074017,49.544464,44.09339,-0.24907255,0.092740536,-0.23151302,0.015866756,0.15229464,-0.015866756,0.5305777,0.21561468,-1.1329205,-0.18004663,1.1329205,"down","SLC22A6",9356,"0006820 // anion transport // inferred from electronic annotation /// 0015711 // organic anion transport // inferred from direct assay /// 0015711 // organic anion transport // inferred from mutant phenotype /// 0015711 // organic anion transport // inferred from electronic annotation /// 0015742 // alpha-ketoglutarate transport // inferred from direct assay /// 0031427 // response to methotrexate // inferred from electronic annotation /// 0034220 // ion transmembrane transport // inferred from electronic annotation /// 0043252 // sodium-independent organic anion transport // inferred from direct assay /// 0043252 // sodium-independent organic anion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0097254 // renal tubular secretion // inferred from mutant phenotype /// 0097254 // renal tubular secretion // non-traceable author statement","0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0005901 // caveola // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation","0005452 // inorganic anion exchanger activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008514 // organic anion transmembrane transporter activity // inferred from direct assay /// 0008514 // organic anion transmembrane transporter activity // inferred from mutant phenotype /// 0008514 // organic anion transmembrane transporter activity // inferred from electronic annotation /// 0015075 // ion transmembrane transporter activity // inferred from electronic annotation /// 0015347 // sodium-independent organic anion transmembrane transporter activity // inferred from direct assay /// 0015347 // sodium-independent organic anion transmembrane transporter activity // inferred from electronic annotation /// 0022857 // transmembrane transporter activity // inferred from electronic annotation","chr11:62744069-62752495 (-) // 91.34 // q12.3"]
["11727040_at",103.26807,87.28803,76.532005,96.86991,92.22246,84.668915,0.20287132,-0.03966713,-0.22938776,0.11059761,0.03966713,-0.08361864,0.9106004,0.76333874,-1.031166,-0.04427654,1.031166,"down","MAVS",57506,"0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0002218 // activation of innate immune response // inferred from mutant phenotype /// 0002230 // positive regulation of defense response to virus by host // inferred from direct assay /// 0002230 // positive regulation of defense response to virus by host // inferred from mutant phenotype /// 0007165 // signal transduction // inferred from mutant phenotype /// 0009615 // response to virus // inferred from electronic annotation /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0032727 // positive regulation of interferon-alpha production // inferred from direct assay /// 0032727 // positive regulation of interferon-alpha production // inferred from mutant phenotype /// 0032728 // positive regulation of interferon-beta production // inferred from direct assay /// 0032728 // positive regulation of interferon-beta production // inferred from mutant phenotype /// 0032757 // positive regulation of interleukin-8 production // inferred from direct assay /// 0032760 // positive regulation of tumor necrosis factor production // inferred from direct assay /// 0033160 // positive regulation of protein import into nucleus, translocation // inferred from direct assay /// 0042742 // defense response to bacterium // inferred from mutant phenotype /// 0042993 // positive regulation of transcription factor import into nucleus // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045071 // negative regulation of viral genome replication // inferred from direct assay /// 0045087 // innate immune response // inferred from mutant phenotype /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051607 // defense response to virus // inferred from direct assay /// 0060340 // positive regulation of type I interferon-mediated signaling pathway // inferred from direct assay /// 0071360 // cellular response to exogenous dsRNA // inferred from mutant phenotype /// 0071651 // positive regulation of chemokine (C-C motif) ligand 5 production // inferred from direct assay /// 0071660 // positive regulation of IP-10 production // inferred from direct assay /// 1900063 // regulation of peroxisome organization // inferred from mutant phenotype","0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005778 // peroxisomal membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from direct assay","0004871 // signal transducer activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0050700 // CARD domain binding // inferred from physical interaction","chr20:3827445-3856770 (+) // 56.91 // p13"]
["11716103_a_at",3799.8894,3619.4773,3699.7263,3982.523,3822.728,3783.0571,0.0032024384,-0.066973686,-0.035336494,0.07092762,0.011846542,-0.0032024384,0.40125597,0.12156925,-1.0421478,-0.059559837,1.0421478,"down","PCNA",5111,"0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000083 // regulation of transcription involved in G1/S phase of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0000278 // mitotic cell cycle // traceable author statement /// 0000722 // telomere maintenance via recombination // traceable author statement /// 0000723 // telomere maintenance // traceable author statement /// 0006260 // DNA replication // non-traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement /// 0006275 // regulation of DNA replication // inferred from electronic annotation /// 0006281 // DNA repair // non-traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006284 // base-excision repair // traceable author statement /// 0006287 // base-excision repair, gap-filling // inferred from electronic annotation /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006297 // nucleotide-excision repair, DNA gap filling // traceable author statement /// 0006298 // mismatch repair // inferred from direct assay /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0019985 // translesion synthesis // inferred from direct assay /// 0032077 // positive regulation of deoxyribonuclease activity // inferred from direct assay /// 0032201 // telomere maintenance via semi-conservative replication // traceable author statement /// 0033993 // response to lipid // inferred from electronic annotation /// 0046686 // response to cadmium ion // inferred from electronic annotation /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement","0000307 // cyclin-dependent protein kinase holoenzyme complex // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005652 // nuclear lamina // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005657 // replication fork // inferred from electronic annotation /// 0005663 // DNA replication factor C complex // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0043596 // nuclear replication fork // inferred from direct assay /// 0043626 // PCNA complex // inferred from electronic annotation /// 0070557 // PCNA-p21 complex // inferred from direct assay","0000701 // purine-specific mismatch base pair DNA N-glycosylase activity // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030337 // DNA polymerase processivity factor activity // inferred from electronic annotation /// 0030971 // receptor tyrosine kinase binding // inferred from physical interaction /// 0032139 // dinucleotide insertion or deletion binding // inferred from direct assay /// 0032405 // MutLalpha complex binding // inferred from direct assay /// 0042802 // identical protein binding // inferred from physical interaction","chr20:5095598-5107264 (-) // 90.17 // p13"]
["11746345_a_at",355.5403,321.90265,321.9984,342.4325,302.7,296.43768,0.14317417,-0.00021457672,0.00021457672,0.088980675,-0.08895016,-0.11911011,0.654958,0.33898172,1.0624669,0.08741784,1.0624669,"up","RANBP3",8498,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0046907 // intracellular transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008536 // Ran GTPase binding // traceable author statement /// 0070412 // R-SMAD binding // inferred from physical interaction","chr19:5916153-5976587 (-) // 88.35 // p13.3"]
["11723932_a_at",45.88106,43.64562,44.002605,42.96126,43.17725,52.988163,0.06618595,-0.0058760643,0.0058760643,-0.02867651,-0.02144146,0.27395725,0.8488969,0.63409555,-1.0370972,-0.052551135,1.0370972,"down","PNMA3",29944,"0006915 // apoptotic process // non-traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chrX:152224765-152228822 (+) // 70.29 // q28"]
["11740091_s_at",11.875059,9.372432,8.049069,9.880275,10.317303,10.328484,0.23409057,-0.10734868,-0.3269503,-0.03122139,0.03122139,0.032784224,0.8629101,0.6615973,-1.0553081,-0.07766426,1.0553081,"down","TMEM163",81615,"","0005768 // endosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030285 // integral to synaptic vesicle membrane // inferred from sequence or structural similarity /// 0030285 // integral to synaptic vesicle membrane // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from sequence or structural similarity /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0008270 // zinc ion binding // inferred from sequence or structural similarity","chr2:135213330-135476570 (-) // 96.16 // q21.3"]
["11716348_s_at",389.55606,419.90735,423.6042,432.38943,392.69275,391.47693,-0.059905052,0.048335075,0.060980797,0.090595245,-0.048335075,-0.05280876,0.9089302,0.75856906,1.01395,0.019986497,1.01395,"up","KIAA0494",9813,"","","0005509 // calcium ion binding // inferred from electronic annotation","chr1:47140830-47184792 (-) // 98.52 // p33"]
["11763361_at",28.712147,28.04644,28.427702,33.003838,35.208138,33.700943,-0.10048628,-0.1343298,-0.114850044,0.10048628,0.19376135,0.13064146,0.039068844,0.0009006826,-1.1959732,-0.258185,1.1959732,"down","VSIG2",23584,"","0005624 // membrane fraction // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:124618001-124622089 (-) // 97.46 // q24.2"]
["11736360_a_at",11.737916,13.063167,13.952261,12.68944,13.116511,13.756,-0.15726805,-0.002939701,0.092054605,-0.044816017,0.002939701,0.07161641,0.8838574,0.7046703,-1.0228759,-0.03263113,1.0228759,"down","LGI2",55203,"","0005576 // extracellular region // inferred from electronic annotation","","chr4:24999976-25032415 (-) // 95.34 // p15.2"]
["11721041_a_at",93.40558,105.8657,97.2435,106.655495,120.97641,109.46373,-0.18601608,-0.005361557,-0.12792301,0.005361557,0.18712902,0.042856216,0.31201482,0.07388046,-1.1367244,-0.18488245,1.1367244,"down","TRAPPC11",60684,"0006810 // transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005794 // Golgi apparatus // inferred from electronic annotation","","chr4:184580441-184634745 (+) // 98.03 // q35.1"]
["11760924_at",70.038734,68.38956,70.72287,78.08771,75.6211,77.05621,-0.062330723,-0.096707344,-0.048306465,0.094611645,0.04830599,0.07542801,0.054932237,0.0019603232,-1.1033548,-0.1418968,1.1033548,"down","RBM8A",9939,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from mutant phenotype /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from electronic annotation /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006369 // termination of RNA polymerase II transcription // traceable author statement /// 0006396 // RNA processing // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006406 // mRNA export from nucleus // traceable author statement /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031124 // mRNA 3'-end processing // traceable author statement /// 0051028 // mRNA transport // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016607 // nuclear speck // inferred from electronic annotation /// 0035145 // exon-exon junction complex // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr1:145507414-145508765 (+) // 99.58 // q21.1"]
["11733368_at",91.722885,83.389534,88.54146,60.229958,87.44214,91.18741,0.05994129,-0.077474594,0.009012222,-0.54685974,-0.009012222,0.05149412,0.73322827,0.4429946,1.1213881,0.16528563,1.1213881,"up","HIST1H4A /// HIST1H4B /// HIST1H4C /// HIST1H4D /// HIST1H4E /// HIST1H4F /// HIST1H4H /// HIST1H4I /// HIST1H4J /// HIST1H4K /// HIST1H4L /// HIST2H4A /// HIST2H4B /// HIST4H4","121504 /// 554313 /// 8294 /// 8359 /// 8360 /// 8361 /// 8362 /// 8363 /// 8364 /// 8365 /// 8366 /// 8367 /// 8368 /// 8370","0000723 // telomere maintenance // traceable author statement /// 0006325 // chromatin organization // non-traceable author statement /// 0006334 // nucleosome assembly // traceable author statement /// 0006334 // nucleosome assembly // inferred from electronic annotation /// 0034080 // CenH3-containing nucleosome assembly at centromere // traceable author statement /// 0045653 // negative regulation of megakaryocyte differentiation // inferred from direct assay /// 0048015 // phosphatidylinositol-mediated signaling // non-traceable author statement","0000786 // nucleosome // traceable author statement /// 0000786 // nucleosome // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr6:27107087-27108393 (+) // 86.42 // p22.1"]
["11740950_at",24.437332,28.632637,25.896486,22.891209,28.238592,28.001694,-0.1400485,0.088525295,-0.05637884,-0.23434162,0.068532944,0.05637884,0.9983981,0.9968013,1.0003531,0.0005093227,1.0003531,"up","HRH2",3274,"0006955 // immune response // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007187 // G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004969 // histamine receptor activity // inferred from electronic annotation /// 0004969 // histamine receptor activity // traceable author statement","chr5:175108463-175111558 (+) // 72.49 // q35.2"]
["11728767_s_at",493.83572,443.02332,421.8892,426.27524,400.46136,434.84534,0.19788742,0.041238785,-0.029279709,-0.0143585205,-0.10448074,0.0143585205,0.55939573,0.24049996,1.0753273,0.10477581,1.0753273,"up","KLHL5",51088,"","0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation","chr4:39063851-39123829 (+) // 98.06 // p14"]
["11740079_a_at",207.84245,153.98647,146.35632,197.1363,120.92072,157.73846,0.41532183,-0.017365456,-0.09068346,0.33902454,-0.36610746,0.017365456,0.8830777,0.7029126,1.0759891,0.1056635,1.0759891,"up","ZNF219",51222,"0006351 // transcription, DNA-dependent // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0004969 // histamine receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:21558204-21567173 (-) // 93.43 // q11.2"]
["11746466_a_at",301.78378,305.78815,281.8956,255.10535,239.34888,259.7608,0.15734291,0.17636013,0.05898857,-0.08507919,-0.17705679,-0.05898857,0.11363359,0.00957682,1.1793065,0.23793873,1.1793065,"up","PRMT2",3275,"0006479 // protein methylation // traceable author statement /// 0006479 // protein methylation // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0016571 // histone methylation // inferred from direct assay /// 0016571 // histone methylation // inferred from sequence or structural similarity /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0032259 // methylation // inferred from electronic annotation /// 0034969 // histone arginine methylation // inferred from sequence or structural similarity /// 0034969 // histone arginine methylation // inferred from electronic annotation /// 0035246 // peptidyl-arginine N-methylation // inferred from sequence or structural similarity /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0048588 // developmental cell growth // inferred from sequence or structural similarity /// 0060765 // regulation of androgen receptor signaling pathway // inferred from direct assay /// 2000134 // negative regulation of G1/S transition of mitotic cell cycle // inferred from sequence or structural similarity","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0035189 // Rb-E2F complex // inferred from sequence or structural similarity","0003713 // transcription coactivator activity // inferred from direct assay /// 0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008469 // histone-arginine N-methyltransferase activity // inferred from sequence or structural similarity /// 0008469 // histone-arginine N-methyltransferase activity // inferred from electronic annotation /// 0016274 // protein-arginine N-methyltransferase activity // inferred from sequence or structural similarity /// 0016740 // transferase activity // inferred from electronic annotation /// 0030331 // estrogen receptor binding // inferred from direct assay /// 0030331 // estrogen receptor binding // inferred from physical interaction /// 0033142 // progesterone receptor binding // inferred from physical interaction /// 0042054 // histone methyltransferase activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0042974 // retinoic acid receptor binding // inferred from physical interaction /// 0042975 // peroxisome proliferator activated receptor binding // inferred from physical interaction /// 0046966 // thyroid hormone receptor binding // inferred from physical interaction /// 0050681 // androgen receptor binding // inferred from physical interaction","chr21:48055561-48084856 (+) // 97.17 // q22.3"]
["11718413_a_at",1072.8219,1107.1608,1060.7219,1311.1951,1429.4071,1260.8354,-0.13921165,-0.09375763,-0.15557575,0.15025997,0.27479458,0.09375763,0.09031604,0.005904588,-1.2332389,-0.30245233,1.2332389,"down","C14orf166",51637,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation /// 0072669 // tRNA-splicing ligase complex // inferred from direct assay","0000993 // RNA polymerase II core binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction","chr14:52456192-52471414 (+) // 88.31 // q22.1"]
["11729706_x_at",73.22289,74.435715,74.113686,81.88309,80.88956,77.816666,-0.05574274,-0.032042503,-0.038297653,0.10552788,0.08791542,0.032042027,0.100019336,0.0072895964,-1.0846198,-0.117189355,1.0846198,"down","ZNF561",93134,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:9717824-9785762 (-) // 50.25 // p13.2"]
["11762968_a_at",10.682166,10.960439,10.41982,11.491333,12.671363,16.013592,-0.07122183,-0.03412032,-0.10709572,0.03412032,0.17514586,0.512871,0.35570428,0.09586264,-1.2410189,-0.31152508,1.2410189,"down","MEI1",150365,"0007126 // meiosis // inferred from electronic annotation /// 0007141 // male meiosis I // inferred from electronic annotation /// 0007276 // gamete generation // inferred from electronic annotation /// 0007286 // spermatid development // inferred from electronic annotation","","","chr22:42177418-42190052 (+) // 84.49 // q13.2"]
["11761062_at",13.823007,16.665642,18.251972,13.485859,17.162096,15.3055315,-0.20839357,0.061411858,0.19258738,-0.2440176,0.10376072,-0.061411858,0.8428373,0.62301195,1.0587962,0.08242488,1.0587962,"up","DISP1",84976,"0007224 // smoothened signaling pathway // inferred from sequence or structural similarity /// 0007224 // smoothened signaling pathway // non-traceable author statement /// 0007225 // patched ligand maturation // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0009880 // embryonic pattern specification // inferred from electronic annotation /// 0009953 // dorsal/ventral pattern formation // inferred from electronic annotation /// 0015833 // peptide transport // inferred from sequence or structural similarity /// 0015833 // peptide transport // inferred from electronic annotation /// 0050708 // regulation of protein secretion // inferred from sequence or structural similarity /// 0060539 // diaphragm development // inferred from mutant phenotype /// 0070207 // protein homotrimerization // inferred from sequence or structural similarity","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from sequence or structural similarity","0008158 // hedgehog receptor activity // inferred from electronic annotation /// 0015197 // peptide transporter activity // inferred from sequence or structural similarity /// 0015197 // peptide transporter activity // inferred from electronic annotation","chr1:222988430-223117373 (+) // 71.24 // q41"]
["11742660_x_at",44.99904,41.551746,42.79539,42.79539,42.746353,50.05001,0.07243872,-0.042546272,0,0,-0.0016541481,0.22591496,0.75585395,0.47716457,-1.0459323,-0.06478946,1.0459323,"down","PRHOXNB",646625,"0006144 // purine base metabolic process // inferred from electronic annotation /// 0019428 // allantoin biosynthetic process // inferred from electronic annotation /// 0019628 // urate catabolic process // inferred from electronic annotation","0005777 // peroxisome // inferred from electronic annotation","0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from sequence or structural similarity /// 0016831 // carboxy-lyase activity // inferred from electronic annotation","chr13:28552242-28562774 (-) // 100.0 // q12.2"]
["11753473_x_at",81.79734,99.13649,91.722885,67.59024,84.57144,88.898125,-0.0841074,0.19325447,0.08112049,-0.3593464,-0.035991192,0.035991192,0.597626,0.27740037,1.1354032,0.18320465,1.1354032,"up","TMEM180",79847,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr10:104221169-104232004 (+) // 76.09 // q24.32"]
["11753703_a_at",95.25777,84.005295,87.38733,75.55724,77.013336,87.04873,0.1556859,-0.025671482,0.03127289,-0.17858124,-0.15104342,0.025671482,0.42517292,0.13662116,1.1134835,0.15508024,1.1134835,"up","TMEM44",93109,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:194309257-194336405 (-) // 100.0 // q29"]
["11762812_at",6.897894,7.381466,6.9403214,6.6640816,6.18581,6.5879183,0.024874926,0.122626305,0.033721447,-0.024874926,-0.1323185,-0.04145837,0.25806603,0.0503277,1.0917366,0.12662476,1.0917366,"up","IL31RA",133396,"0000165 // MAPK cascade // non-traceable author statement /// 0006916 // anti-apoptosis // non-traceable author statement /// 0006952 // defense response // non-traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // non-traceable author statement /// 0007259 // JAK-STAT cascade // inferred from expression pattern /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0030224 // monocyte differentiation // inferred from expression pattern /// 0030225 // macrophage differentiation // non-traceable author statement /// 0042517 // positive regulation of tyrosine phosphorylation of Stat3 protein // inferred from expression pattern /// 0042523 // positive regulation of tyrosine phosphorylation of Stat5 protein // inferred from expression pattern /// 0042592 // homeostatic process // non-traceable author statement /// 0043031 // negative regulation of macrophage activation // non-traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // non-traceable author statement","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0003713 // transcription coactivator activity // non-traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004896 // cytokine receptor activity // traceable author statement /// 0019901 // protein kinase binding // non-traceable author statement /// 0019955 // cytokine binding // non-traceable author statement","chr5:55155336-55198288 (+) // 80.52 // q11.2"]
["11761029_at",20.029709,19.036415,16.531874,23.111073,18.811562,19.022139,0.07392073,0.0005412102,-0.2029705,0.28036356,-0.016601086,-0.0005412102,0.67345035,0.36235023,-1.0947311,-0.13057654,1.0947311,"down","SLC11A1",6556,"0000060 // protein import into nucleus, translocation // inferred from electronic annotation /// 0001818 // negative regulation of cytokine production // inferred from sequence or structural similarity /// 0001818 // negative regulation of cytokine production // inferred from electronic annotation /// 0001819 // positive regulation of cytokine production // inferred from sequence or structural similarity /// 0001819 // positive regulation of cytokine production // inferred from electronic annotation /// 0002309 // T cell proliferation involved in immune response // inferred from sequence or structural similarity /// 0002309 // T cell proliferation involved in immune response // inferred from electronic annotation /// 0002369 // T cell cytokine production // inferred from sequence or structural similarity /// 0002369 // T cell cytokine production // inferred from electronic annotation /// 0002606 // positive regulation of dendritic cell antigen processing and presentation // inferred from sequence or structural similarity /// 0002606 // positive regulation of dendritic cell antigen processing and presentation // inferred from electronic annotation /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from sequence or structural similarity /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006826 // iron ion transport // inferred from mutant phenotype /// 0006826 // iron ion transport // inferred from electronic annotation /// 0006828 // manganese ion transport // inferred from sequence or structural similarity /// 0006828 // manganese ion transport // inferred from electronic annotation /// 0006876 // cellular cadmium ion homeostasis // inferred from genetic interaction /// 0006879 // cellular iron ion homeostasis // inferred from mutant phenotype /// 0006909 // phagocytosis // inferred from sequence or structural similarity /// 0006909 // phagocytosis // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from sequence or structural similarity /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement /// 0007035 // vacuolar acidification // inferred from sequence or structural similarity /// 0007035 // vacuolar acidification // inferred from electronic annotation /// 0009617 // response to bacterium // inferred from direct assay /// 0010628 // positive regulation of gene expression // inferred from sequence or structural similarity /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0015707 // nitrite transport // inferred from sequence or structural similarity /// 0015707 // nitrite transport // inferred from electronic annotation /// 0032147 // activation of protein kinase activity // inferred from sequence or structural similarity /// 0032147 // activation of protein kinase activity // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from sequence or structural similarity /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032623 // interleukin-2 production // inferred from sequence or structural similarity /// 0032623 // interleukin-2 production // inferred from electronic annotation /// 0032632 // interleukin-3 production // inferred from sequence or structural similarity /// 0032632 // interleukin-3 production // inferred from electronic annotation /// 0032729 // positive regulation of interferon-gamma production // inferred from sequence or structural similarity /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0034341 // response to interferon-gamma // inferred from sequence or structural similarity /// 0034341 // response to interferon-gamma // inferred from electronic annotation /// 0042060 // wound healing // inferred from sequence or structural similarity /// 0042060 // wound healing // inferred from electronic annotation /// 0042116 // macrophage activation // inferred from sequence or structural similarity /// 0042116 // macrophage activation // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from sequence or structural similarity /// 0042742 // defense response to bacterium // inferred from electronic annotation /// 0042832 // defense response to protozoan // inferred from sequence or structural similarity /// 0042832 // defense response to protozoan // inferred from electronic annotation /// 0043091 // L-arginine import // inferred from sequence or structural similarity /// 0043091 // L-arginine import // inferred from electronic annotation /// 0045342 // MHC class II biosynthetic process // inferred from sequence or structural similarity /// 0045342 // MHC class II biosynthetic process // inferred from electronic annotation /// 0045730 // respiratory burst // inferred from sequence or structural similarity /// 0045730 // respiratory burst // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048002 // antigen processing and presentation of peptide antigen // inferred from sequence or structural similarity /// 0048002 // antigen processing and presentation of peptide antigen // inferred from electronic annotation /// 0048255 // mRNA stabilization // inferred from sequence or structural similarity /// 0048255 // mRNA stabilization // inferred from electronic annotation /// 0050766 // positive regulation of phagocytosis // inferred from sequence or structural similarity /// 0050766 // positive regulation of phagocytosis // inferred from electronic annotation /// 0050829 // defense response to Gram-negative bacterium // inferred from sequence or structural similarity /// 0050829 // defense response to Gram-negative bacterium // inferred from electronic annotation /// 0055072 // iron ion homeostasis // inferred from sequence or structural similarity /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0060586 // multicellular organismal iron ion homeostasis // inferred from sequence or structural similarity /// 0060586 // multicellular organismal iron ion homeostasis // inferred from electronic annotation /// 0070574 // cadmium ion transmembrane transport // inferred from genetic interaction /// 0070839 // divalent metal ion export // inferred from sequence or structural similarity /// 0070839 // divalent metal ion export // inferred from electronic annotation /// 0071421 // manganese ion transmembrane transport // inferred from sequence or structural similarity /// 0071421 // manganese ion transmembrane transport // inferred from electronic annotation","0005764 // lysosome // inferred from sequence or structural similarity /// 0005764 // lysosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from sequence or structural similarity /// 0005770 // late endosome // inferred from electronic annotation /// 0005773 // vacuole // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from mutant phenotype /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0009279 // cell outer membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // inferred from direct assay /// 0030670 // phagocytic vesicle membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // traceable author statement /// 0070821 // tertiary granule membrane // inferred from direct assay","0005215 // transporter activity // inferred from electronic annotation /// 0005384 // manganese ion transmembrane transporter activity // inferred from sequence or structural similarity /// 0005384 // manganese ion transmembrane transporter activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046915 // transition metal ion transmembrane transporter activity // inferred from genetic interaction /// 0051139 // metal ion:hydrogen antiporter activity // inferred from genetic interaction","chr2:219246973-219252721 (+) // 84.15 // q35"]
["11761555_at",27.6902,25.392925,22.534624,18.571884,26.441032,20.248045,0.21109056,0.08614159,-0.08614159,-0.36516476,0.14449358,-0.24050236,0.5915309,0.27174854,1.1680386,0.22408795,1.1680386,"up","CFB",629,"0006508 // proteolysis // inferred from electronic annotation /// 0006956 // complement activation // traceable author statement /// 0006956 // complement activation // inferred from electronic annotation /// 0006957 // complement activation, alternative pathway // non-traceable author statement /// 0006957 // complement activation, alternative pathway // traceable author statement /// 0006957 // complement activation, alternative pathway // inferred from electronic annotation /// 0030449 // regulation of complement activation // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement","0001848 // complement binding // traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // traceable author statement /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr6:31913751-31914897 (+) // 100.0 // p21.33"]
["11738512_a_at",11.506327,14.020935,14.018581,11.151674,15.322042,17.269958,-0.28503418,0.00012111664,-0.00012111664,-0.33020115,0.12814689,0.30080318,0.8176065,0.5768558,-1.092723,-0.12792775,1.092723,"down","GADL1",339896,"0019752 // carboxylic acid metabolic process // inferred from electronic annotation","","0003824 // catalytic activity // inferred from electronic annotation /// 0016829 // lyase activity // inferred from electronic annotation /// 0016831 // carboxy-lyase activity // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation","chr3:30767691-30936153 (-) // 90.49 // p24.1"]
["11740018_a_at",174.27974,185.23735,177.55623,164.0904,143.85588,149.36159,0.04345703,0.13142776,0.070328236,-0.043456554,-0.23332357,-0.17913866,0.16154572,0.01979626,1.1758554,0.23371065,1.1758554,"up","INSR",3643,"0000187 // activation of MAPK activity // inferred from mutant phenotype /// 0001933 // negative regulation of protein phosphorylation // inferred from electronic annotation /// 0001934 // positive regulation of protein phosphorylation // inferred from direct assay /// 0003007 // heart morphogenesis // inferred from mutant phenotype /// 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // inferred by curator /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008286 // insulin receptor signaling pathway // inferred from direct assay /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008286 // insulin receptor signaling pathway // inferred from electronic annotation /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0009887 // organ morphogenesis // inferred from electronic annotation /// 0010042 // response to manganese ion // inferred from electronic annotation /// 0010310 // regulation of hydrogen peroxide metabolic process // inferred from electronic annotation /// 0010560 // positive regulation of glycoprotein biosynthetic process // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0014823 // response to activity // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0019087 // transformation of host cell by virus // inferred from mutant phenotype /// 0023014 // signal transduction by phosphorylation // inferred from direct assay /// 0030238 // male sex determination // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from mutant phenotype /// 0031017 // exocrine pancreas development // inferred from electronic annotation /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0032147 // activation of protein kinase activity // inferred from mutant phenotype /// 0032148 // activation of protein kinase B activity // inferred from direct assay /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032410 // negative regulation of transporter activity // inferred from electronic annotation /// 0032868 // response to insulin stimulus // inferred from electronic annotation /// 0032869 // cellular response to insulin stimulus // inferred from direct assay /// 0033280 // response to vitamin D // inferred from electronic annotation /// 0033574 // response to testosterone stimulus // inferred from electronic annotation /// 0034612 // response to tumor necrosis factor // inferred from electronic annotation /// 0042327 // positive regulation of phosphorylation // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from mutant phenotype /// 0043410 // positive regulation of MAPK cascade // inferred from mutant phenotype /// 0045429 // positive regulation of nitric oxide biosynthetic process // inferred from mutant phenotype /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045725 // positive regulation of glycogen biosynthetic process // inferred from direct assay /// 0045740 // positive regulation of DNA replication // inferred from mutant phenotype /// 0045821 // positive regulation of glycolysis // inferred from mutant phenotype /// 0045840 // positive regulation of mitosis // inferred from mutant phenotype /// 0045995 // regulation of embryonic development // inferred from mutant phenotype /// 0046326 // positive regulation of glucose import // inferred from direct assay /// 0046326 // positive regulation of glucose import // non-traceable author statement /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048639 // positive regulation of developmental growth // inferred from mutant phenotype /// 0051290 // protein heterotetramerization // inferred from direct assay /// 0051290 // protein heterotetramerization // inferred from electronic annotation /// 0051384 // response to glucocorticoid stimulus // inferred from electronic annotation /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from mutant phenotype /// 0060267 // positive regulation of respiratory burst // inferred from direct assay /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005792 // microsome // inferred from direct assay /// 0005792 // microsome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred by curator /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0005899 // insulin receptor complex // inferred from mutant phenotype /// 0005901 // caveola // inferred from direct assay /// 0005901 // caveola // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from mutant phenotype /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004716 // receptor signaling protein tyrosine kinase activity // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0005009 // insulin-activated receptor activity // inferred from direct assay /// 0005009 // insulin-activated receptor activity // inferred from electronic annotation /// 0005159 // insulin-like growth factor receptor binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0019903 // protein phosphatase binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0031405 // lipoic acid binding // inferred from electronic annotation /// 0031994 // insulin-like growth factor I binding // inferred from physical interaction /// 0031995 // insulin-like growth factor II binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation /// 0042169 // SH2 domain binding // inferred from physical interaction /// 0043423 // 3-phosphoinositide-dependent protein kinase binding // inferred from electronic annotation /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from physical interaction /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation /// 0043559 // insulin binding // inferred from direct assay /// 0043559 // insulin binding // inferred from electronic annotation /// 0043559 // insulin binding // inferred from physical interaction /// 0043560 // insulin receptor substrate binding // inferred from physical interaction /// 0043560 // insulin receptor substrate binding // inferred from electronic annotation /// 0051425 // PTB domain binding // inferred from physical interaction","chr19:7112265-7294011 (-) // 98.37 // p13.2"]
["11731275_at",11.750544,15.548079,13.811019,11.277207,13.744774,15.591231,-0.2296238,0.17438483,0.003468275,-0.28894162,-0.003468275,0.17838335,0.969026,0.9135155,1.0144881,0.020751944,1.0144881,"up","CLEC4G",339390,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr19:7793842-7797009 (-) // 85.75 // p13.2"]
["11755755_a_at",7.85761,7.6335163,8.789759,6.4354367,6.857794,8.343287,0.0208714,-0.0208714,0.18260455,-0.26718116,-0.17547464,0.10739684,0.5704639,0.2508533,1.1271044,0.17262116,1.1271044,"up","DDX26B",203522,"","","","chrX:134654593-134716434 (+) // 97.64 // q26.3"]
["11736857_at",15.583318,16.00385,16.863838,15.89514,19.637987,19.18014,-0.076173544,-0.03775692,0.03775692,-0.047590256,0.25747108,0.22343731,0.47441372,0.17174533,-1.1249263,-0.16983052,1.1249263,"down","ODF1",4956,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // non-traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0001520 // outer dense fiber // non-traceable author statement /// 0001520 // outer dense fiber // inferred from electronic annotation","0005198 // structural molecule activity // non-traceable author statement /// 0019904 // protein domain specific binding // inferred from electronic annotation","chr8:103563799-103573245 (+) // 92.99 // q22.3"]
["11760880_a_at",119.889534,128.19434,140.22289,93.068695,121.61771,148.88954,-0.05863762,0.037990093,0.1673789,-0.4239745,-0.037990093,0.25389957,0.8299769,0.5982488,1.0854291,0.11826546,1.0854291,"up","STAT2",6773,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007259 // JAK-STAT cascade // traceable author statement /// 0009615 // response to virus // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement /// 0060338 // regulation of type I interferon-mediated signaling pathway // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004871 // signal transducer activity // traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr12:56742569-56754046 (-) // 96.85 // q13.3"]
["11744290_a_at",537.05634,514.6022,507.43515,584.223,542.8607,552.3894,-0.007754326,-0.06937027,-0.08960438,0.11369133,0.007754326,0.032857895,0.27339172,0.056821592,-1.0769944,-0.107010774,1.0769944,"down","BRMS1",25855,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0009987 // cellular process // inferred from electronic annotation /// 0019987 // negative regulation of anti-apoptosis // inferred from direct assay /// 0032088 // negative regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0090312 // positive regulation of protein deacetylation // inferred from direct assay /// 2000210 // positive regulation of anoikis // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0051059 // NF-kappaB binding // inferred from direct assay","chr11:66104809-66112596 (-) // 94.12 // q13.2"]
["11757347_s_at",9.914934,8.633972,8.752748,9.141183,10.249235,10.269597,0.058611155,-0.14096761,-0.12125635,-0.058611155,0.10645223,0.109315634,0.5441504,0.22703503,-1.0869281,-0.12025654,1.0869281,"down","RNF144A",9781,"0016567 // protein ubiquitination // inferred from electronic annotation","0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:7183541-7184310 (+) // 98.72 // p25.1"]
["11717721_s_at",39.41706,38.666817,49.06909,45.117733,54.624264,48.277943,-0.24370909,-0.27143335,0.072285175,-0.0488348,0.22701263,0.0488348,0.48271778,0.1776036,-1.1673927,-0.22328998,1.1673927,"down","ST6GAL1",6480,"0006464 // cellular protein modification process // non-traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006959 // humoral immune response // traceable author statement /// 0016266 // O-glycan processing // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030173 // integral to Golgi membrane // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation","0003835 // beta-galactoside alpha-2,6-sialyltransferase activity // inferred from electronic annotation /// 0008373 // sialyltransferase activity // inferred from direct assay /// 0008373 // sialyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr3:186756529-186796341 (+) // 81.64 // q27.3"]
["11731313_a_at",68.05624,68.89412,65.168526,56.82339,60.527184,54.17004,0.115848064,0.13350105,0.05329609,-0.1443944,-0.05329609,-0.21338415,0.118573986,0.01046624,1.1792803,0.23790665,1.1792803,"up","GCFC1",94104,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation","chr21:34115556-34144169 (-) // 88.54 // q22.11"]
["11748526_a_at",12.836249,13.508491,15.2696085,13.598093,15.417001,16.472862,-0.16681027,-0.093167305,0.08362913,-0.08362937,0.097488165,0.19305754,0.62883824,0.31014794,-1.0925921,-0.12775493,1.0925921,"down","HVCN1",84329,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0009268 // response to pH // inferred from sequence or structural similarity /// 0009268 // response to pH // inferred from electronic annotation /// 0010043 // response to zinc ion // inferred from direct assay /// 0010043 // response to zinc ion // inferred from sequence or structural similarity /// 0010043 // response to zinc ion // inferred from electronic annotation /// 0015992 // proton transport // inferred from sequence or structural similarity /// 0015992 // proton transport // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0030171 // voltage-gated proton channel activity // inferred from direct assay /// 0030171 // voltage-gated proton channel activity // inferred from sequence or structural similarity /// 0030171 // voltage-gated proton channel activity // inferred from electronic annotation","chr12:111065645-111127227 (-) // 87.06 // q24.11"]
["11728987_a_at",86.19743,84.849686,82.57548,92.144066,101.3368,84.82165,0.011367321,-0.011367798,-0.050563335,0.10761404,0.24480915,-0.011844635,0.46319905,0.16276745,-1.0945826,-0.13038076,1.0945826,"down","RNPC3",55599,"0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred by curator /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005689 // U12-type spliceosomal complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr1:104068577-104097861 (+) // 98.8 // p21.1"]
["11726748_at",80.36856,68.198746,81.14491,77.35519,83.56562,94.28629,-0.0069351196,-0.24382114,0.006934643,-0.062067986,0.04934311,0.22348213,0.5824243,0.26255372,-1.110744,-0.15152635,1.110744,"down","TMEM57",55219,"0007420 // brain development // inferred from electronic annotation","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from sequence or structural similarity /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0044306 // neuron projection terminus // inferred from sequence or structural similarity /// 0044306 // neuron projection terminus // inferred from electronic annotation /// 0044456 // synapse part // inferred from sequence or structural similarity /// 0044456 // synapse part // inferred from electronic annotation","","chr1:25757348-25826695 (+) // 97.83 // p36.11"]
["11745718_s_at",1970.4028,1543.9824,1620.703,1690.3188,1234.2163,1226.6984,0.31685257,-0.034981728,0.034981728,0.09565735,-0.35804272,-0.36685753,0.46808106,0.16660255,1.2443266,0.3153652,1.2443266,"up","GTF2I /// GTF2IP1 /// LOC100093631","100093631 /// 2969 /// 2970","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0009790 // embryo development // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0051019 // mitogen-activated protein kinase binding // inferred from electronic annotation","chr7:72569015-72621336 (+) // 93.08 // q11.23 /// chr7:74601103-74653455 (-) // 93.08 // q11.23"]
["11745955_a_at",521.2233,451.60907,410.924,443.4716,334.59906,425.26428,0.2633009,0.056473732,-0.07972908,0.030241013,-0.3761673,-0.030241013,0.5911924,0.27147335,1.1530094,0.2054043,1.1530094,"up","CLSTN1",22883,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr1:9789085-9884023 (-) // 97.06 // p36.22"]
["11754183_s_at",141.58531,126.89527,141.7617,285.16534,275.22293,249.45132,-0.40944147,-0.5674739,-0.40764523,0.6006861,0.54948807,0.4076457,0.024122445,0.00023441185,-1.9735506,-0.9807935,1.9735506,"down","HMGB3",3149,"0006310 // DNA recombination // inferred from sequence or structural similarity /// 0007275 // multicellular organismal development // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from sequence or structural similarity /// 0008301 // DNA binding, bending // inferred from sequence or structural similarity /// 0008301 // DNA binding, bending // traceable author statement","chrX:150151762-150159246 (+) // 87.43 // q28"]
["11762660_at",44.001427,43.579613,41.541023,29.424253,36.484573,45.35687,0.04845524,0.034558296,-0.034558296,-0.53208923,-0.22180843,0.09222603,0.5832267,0.26336414,1.1783017,0.23670897,1.1783017,"up",-0.034558296,"","","","","0016787 // hydrolase activity // inferred from electronic annotation"]
["11757361_x_at",1843.8262,1717.6332,1808.4961,2281.5671,1904.4828,1577.9706,0.01395607,-0.08832455,-0.01395607,0.32127857,0.060652733,-0.2106762,0.8351903,0.6099535,-1.0618107,-0.086526625,1.0618107,"down","PSMA2",5683,"0000075 // cell cycle checkpoint // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000209 // protein polyubiquitination // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006521 // regulation of cellular amino acid metabolic process // traceable author statement /// 0006915 // apoptotic process // traceable author statement /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest // traceable author statement /// 0009615 // response to virus // inferred from expression pattern /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0051436 // negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051603 // proteolysis involved in cellular protein catabolic process // inferred from electronic annotation","0000502 // proteasome complex // traceable author statement /// 0000502 // proteasome complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005839 // proteasome core complex // inferred from electronic annotation /// 0019773 // proteasome core complex, alpha-subunit complex // inferred from electronic annotation","0004175 // endopeptidase activity // inferred from electronic annotation /// 0004298 // threonine-type endopeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr7:42956486-42963006 (-) // 98.13 // p14.1"]
["11739383_a_at",980.9793,862.4685,952.28296,1068.1014,948.09094,883.3903,0.046014786,-0.13973618,0.0031824112,0.16876888,-0.0031824112,-0.1051569,0.8486203,0.633609,-1.0354966,-0.050322805,1.0354966,"down","IDI1",3422,"0006694 // steroid biosynthetic process // inferred from electronic annotation /// 0006695 // cholesterol biosynthetic process // traceable author statement /// 0006695 // cholesterol biosynthetic process // inferred from electronic annotation /// 0008299 // isoprenoid biosynthetic process // inferred from direct assay /// 0008299 // isoprenoid biosynthetic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0016126 // sterol biosynthetic process // inferred from electronic annotation /// 0035634 // response to stilbenoid // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0050992 // dimethylallyl diphosphate biosynthetic process // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005777 // peroxisome // inferred from direct assay /// 0005777 // peroxisome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000287 // magnesium ion binding // inferred from direct assay /// 0004452 // isopentenyl-diphosphate delta-isomerase activity // inferred from direct assay /// 0004452 // isopentenyl-diphosphate delta-isomerase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016853 // isomerase activity // inferred from electronic annotation /// 0030145 // manganese ion binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:1085968-1095061 (-) // 89.45 // p15.3"]
["11763566_at",7.7738323,7.1583414,6.643854,7.3899193,6.3872304,6.2302356,0.17280316,0.05380249,-0.05380249,0.09973574,-0.11063242,-0.14653611,0.6526412,0.3366331,1.079287,0.11007862,1.079287,"up","WDR48",57599,"0016579 // protein deubiquitination // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr3:39119626-39138154 (+) // 98.77 // p22.2"]
["11752751_s_at",61.555595,68.731636,73.801674,59.623337,60.4643,75.74497,-0.07954216,0.07954168,0.18222141,-0.12555504,-0.10534859,0.21971798,0.8614249,0.65865916,1.0456998,0.064468786,1.0456998,"up","LOC284889",284889,"","","","chr22:24237097-24316630 (-) // 89.11 // q11.23"]
["11717157_a_at",3030.7202,3008.488,3077.0818,2983.7393,3034.846,3034.5571,-0.00091171265,-0.011534691,0.020991325,-0.023450851,0.0010509491,0.0009126663,0.7515554,0.47042203,1.006963,0.010010694,1.006963,"up","ACP1",52,"0006470 // protein dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005625 // soluble fraction // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0009898 // internal side of plasma membrane // inferred from direct assay","0003993 // acid phosphatase activity // inferred from electronic annotation /// 0003993 // acid phosphatase activity // traceable author statement /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004726 // non-membrane spanning protein tyrosine phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation","chr2:264868-278283 (+) // 95.55 // p25.3"]
["11755394_a_at",24.716373,34.704334,26.106264,24.51859,28.225893,29.899157,-0.13524055,0.35440826,-0.056311607,-0.14683151,0.056311607,0.13939714,0.9414067,0.8378154,1.0266845,0.03799294,1.0266845,"up","ZNF575",284346,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:44029648-44040282 (+) // 73.27 // q13.31"]
["11753251_a_at",4845.1313,4492.719,4412.9883,4510.219,4150.8325,4179.3867,0.12186241,0.012916565,-0.012916565,0.01852417,-0.10127163,-0.09138107,0.4522084,0.15505727,1.0707811,0.09866359,1.0707811,"up","JTB",10899,"0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from mutant phenotype /// 0007067 // mitosis // inferred from electronic annotation /// 0033205 // cell cycle cytokinesis // inferred from mutant phenotype /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005819 // spindle // inferred from direct assay /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay","0019901 // protein kinase binding // inferred from direct assay","chr1:153946987-153950114 (-) // 98.3 // q21.3"]
["11742201_a_at",34.28776,52.46055,35.605423,24.518583,31.649376,26.818228,0.05775833,0.67129755,0.11216164,-0.42605972,-0.05775833,-0.29672146,0.31007338,0.07311343,1.4545629,0.5405857,1.4545629,"up","APAF1",317,"0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // non-traceable author statement /// 0006952 // defense response // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008635 // activation of cysteine-type endopeptidase activity involved in apoptotic process by cytochrome c // inferred from direct assay /// 0008635 // activation of cysteine-type endopeptidase activity involved in apoptotic process by cytochrome c // traceable author statement /// 0042981 // regulation of apoptotic process // traceable author statement /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0097193 // intrinsic apoptotic signaling pathway // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0043293 // apoptosome // inferred from direct assay","0000166 // nucleotide binding // traceable author statement /// 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008656 // cysteine-type endopeptidase activator activity involved in apoptotic process // non-traceable author statement /// 0008656 // cysteine-type endopeptidase activator activity involved in apoptotic process // traceable author statement /// 0043531 // ADP binding // inferred from electronic annotation","chr12:99039077-99129210 (+) // 81.31 // q23.1"]
["11720489_a_at",90.30641,104.78871,107.83269,53.3815,50.449677,59.823772,0.29705477,0.5116377,0.5529485,-0.4614339,-0.5429287,-0.29705477,0.04377438,0.0011662534,1.8502063,0.8876861,1.8502063,"up","ACTC1",70,"0006200 // ATP catabolic process // inferred from direct assay /// 0006915 // apoptotic process // inferred from sequence or structural similarity /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006936 // muscle contraction // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0014829 // vascular smooth muscle contraction // inferred from electronic annotation /// 0030048 // actin filament-based movement // inferred from direct assay /// 0030049 // muscle filament sliding // traceable author statement /// 0030240 // skeletal muscle thin filament assembly // inferred from sequence or structural similarity /// 0030240 // skeletal muscle thin filament assembly // inferred from electronic annotation /// 0031032 // actomyosin structure organization // inferred from sequence or structural similarity /// 0031032 // actomyosin structure organization // inferred from electronic annotation /// 0033275 // actin-myosin filament sliding // inferred from mutant phenotype /// 0042493 // response to drug // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation /// 0055003 // cardiac myofibril assembly // inferred from sequence or structural similarity /// 0055003 // cardiac myofibril assembly // inferred from electronic annotation /// 0055008 // cardiac muscle tissue morphogenesis // inferred from sequence or structural similarity /// 0055008 // cardiac muscle tissue morphogenesis // inferred from electronic annotation /// 0060047 // heart contraction // inferred from mutant phenotype /// 0060048 // cardiac muscle contraction // inferred from electronic annotation","0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005884 // actin filament // inferred from direct assay /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0030017 // sarcomere // inferred from direct assay /// 0030485 // smooth muscle contractile fiber // inferred from electronic annotation /// 0031674 // I band // inferred from sequence or structural similarity /// 0031674 // I band // inferred from electronic annotation /// 0042643 // actomyosin, actin part // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // inferred from direct assay /// 0017022 // myosin binding // inferred from direct assay /// 0017022 // myosin binding // inferred from physical interaction","chr15:35080293-35088340 (-) // 90.83 // q14"]
["11735621_x_at",7.8935237,8.876068,8.681092,7.163416,8.303826,8.876475,-0.1051569,0.064094305,0.032050133,-0.2451787,-0.032050133,0.06416035,0.80375,0.55282116,1.0482761,0.068018705,1.0482761,"up","SPO11",23626,"0000238 // zygotene // inferred from electronic annotation /// 0001541 // ovarian follicle development // inferred from electronic annotation /// 0006259 // DNA metabolic process // inferred from electronic annotation /// 0007126 // meiosis // inferred from electronic annotation /// 0007131 // reciprocal meiotic recombination // inferred from electronic annotation /// 0007131 // reciprocal meiotic recombination // traceable author statement /// 0007141 // male meiosis I // inferred from electronic annotation /// 0007283 // spermatogenesis // traceable author statement /// 0007286 // spermatid development // inferred from electronic annotation /// 0007292 // female gamete generation // traceable author statement /// 0034502 // protein localization to chromosome // inferred from electronic annotation","0000781 // chromosome, telomeric region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr20:55904814-55919049 (+) // 97.66 // q13.31"]
["11744044_s_at",355.76648,356.08905,353.09113,285.7284,296.76785,310.05402,0.1046505,0.105957985,0.09376049,-0.21163559,-0.15694523,-0.09376049,0.052273717,0.0017286221,1.1938074,0.25557005,1.1938074,"up","PCYT2",5833,"0006646 // phosphatidylethanolamine biosynthetic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // traceable author statement /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0009058 // biosynthetic process // inferred from electronic annotation","","0003824 // catalytic activity // inferred from electronic annotation /// 0004306 // ethanolamine-phosphate cytidylyltransferase activity // traceable author statement /// 0004306 // ethanolamine-phosphate cytidylyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation","chr17:79861998-79869340 (-) // 99.95 // q25.3"]
["11748953_a_at",7.5344996,6.5994925,6.0857625,7.2001204,7.593054,7.5958815,0.03274536,-0.15841126,-0.2753284,-0.03274536,0.04391384,0.044451,0.48371688,0.17844497,-1.1112664,-0.15220468,1.1112664,"down","SLC2A2",6514,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0015755 // fructose transport // inferred from electronic annotation /// 0015758 // glucose transport // not recorded /// 0015758 // glucose transport // traceable author statement /// 0015758 // glucose transport // inferred from electronic annotation /// 0031018 // endocrine pancreas development // traceable author statement /// 0035428 // hexose transmembrane transport // traceable author statement /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0070837 // dehydroascorbic acid transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0005903 // brush border // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0031526 // brush border membrane // inferred from electronic annotation","0005158 // insulin receptor binding // inferred from electronic annotation /// 0005215 // transporter activity // inferred from electronic annotation /// 0005355 // glucose transmembrane transporter activity // not recorded /// 0005355 // glucose transmembrane transporter activity // inferred from electronic annotation /// 0005355 // glucose transmembrane transporter activity // traceable author statement /// 0015149 // hexose transmembrane transporter activity // traceable author statement /// 0022857 // transmembrane transporter activity // inferred from electronic annotation /// 0022891 // substrate-specific transmembrane transporter activity // inferred from electronic annotation /// 0033300 // dehydroascorbic acid transporter activity // inferred from electronic annotation /// 0055056 // D-glucose transmembrane transporter activity // inferred from electronic annotation","chr3:170714608-170744509 (-) // 98.25 // q26.2"]
["11717673_a_at",1060.1332,993.7397,970.5283,986.4487,843.9658,921.69434,0.11566639,0.022360802,-0.01173687,0.01173687,-0.21332264,-0.086218834,0.43218967,0.14136833,1.1004027,0.1380316,1.1004027,"up","EIF2B2",8892,"0001541 // ovarian follicle development // inferred from mutant phenotype /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from direct assay /// 0006413 // translational initiation // traceable author statement /// 0006413 // translational initiation // inferred from electronic annotation /// 0006446 // regulation of translational initiation // not recorded /// 0006446 // regulation of translational initiation // traceable author statement /// 0007417 // central nervous system development // inferred from mutant phenotype /// 0009408 // response to heat // inferred from sequence or structural similarity /// 0009408 // response to heat // traceable author statement /// 0009408 // response to heat // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from sequence or structural similarity /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0014003 // oligodendrocyte development // inferred from mutant phenotype /// 0019509 // L-methionine salvage from methylthioadenosine // not recorded /// 0042552 // myelination // inferred from mutant phenotype /// 0043434 // response to peptide hormone stimulus // inferred from sequence or structural similarity /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0044237 // cellular metabolic process // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051716 // cellular response to stimulus // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005851 // eukaryotic translation initiation factor 2B complex // inferred from direct assay","0003743 // translation initiation factor activity // inferred from direct assay /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from direct assay /// 0046523 // S-methyl-5-thioribose-1-phosphate isomerase activity // not recorded","chr14:75469611-75476292 (+) // 98.09 // q24.3"]
["11721612_a_at",293.7551,298.27515,297.625,231.55609,219.20058,205.41624,0.17162609,0.19365597,0.19050789,-0.17162609,-0.2507367,-0.3444376,0.039562047,0.00094253826,1.3574165,0.44086346,1.3574165,"up","IPO11",51194,"0006610 // ribosomal protein import into nucleus // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0008565 // protein transporter activity // inferred from electronic annotation","chr5:61714710-61924409 (+) // 94.17 // q12.1"]
["11726825_at",34.148865,37.40836,35.255787,23.607477,33.651646,38.63847,-0.023011208,0.108511925,0.023011208,-0.55560493,-0.04417181,0.15518904,0.73085505,0.4398061,1.136318,0.18436658,1.136318,"up","VPS37D",155382,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral reproduction // traceable author statement /// 0016044 // cellular membrane organization // traceable author statement /// 0016197 // endosomal transport // traceable author statement /// 0046788 // egress of virus within host cell // traceable author statement","0005768 // endosome // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","","chr7:73082157-73086440 (+) // 82.07 // q11.23"]
["11760390_at",38.817776,44.28658,44.16819,38.817776,34.367783,31.847164,0,0.19015217,0.18629026,0,-0.17566061,-0.2855525,0.27022028,0.055214763,1.2135373,0.2792185,1.2135373,"up","CEP78",84131,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation","","chr9:80878965-80886791 (+) // 69.36 // q21.2"]
["11738956_x_at",6.8016777,7.252156,8.255642,6.7346597,8.714096,7.1751237,-0.08481622,0.007703066,0.19467354,-0.09910178,0.27264428,-0.007703066,0.969026,0.9132845,-1.0112172,-0.01609296,1.0112172,"down","XAGE5",170627,"","","","chrX:52841577-52847322 (+) // 88.91 // p11.22"]
["11763503_a_at",46.89828,30.809511,37.1518,32.198925,22.50468,18.33671,0.5743408,-0.03181839,0.23823786,0.03181839,-0.48496914,-0.7804594,0.33602053,0.08522181,1.5926805,0.6714568,1.5926805,"up","NF1",4763,"0000165 // MAPK cascade // inferred from sequence or structural similarity /// 0000165 // MAPK cascade // inferred from electronic annotation /// 0001649 // osteoblast differentiation // inferred from sequence or structural similarity /// 0001649 // osteoblast differentiation // inferred from electronic annotation /// 0001656 // metanephros development // inferred from sequence or structural similarity /// 0001656 // metanephros development // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from sequence or structural similarity /// 0001666 // response to hypoxia // inferred from electronic annotation /// 0001889 // liver development // inferred from sequence or structural similarity /// 0001889 // liver development // inferred from electronic annotation /// 0001937 // negative regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001937 // negative regulation of endothelial cell proliferation // inferred from electronic annotation /// 0001938 // positive regulation of endothelial cell proliferation // inferred from electronic annotation /// 0001952 // regulation of cell-matrix adhesion // inferred from sequence or structural similarity /// 0001952 // regulation of cell-matrix adhesion // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // inferred from sequence or structural similarity /// 0006469 // negative regulation of protein kinase activity // inferred from electronic annotation /// 0007154 // cell communication // inferred from sequence or structural similarity /// 0007154 // cell communication // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // inferred from sequence or structural similarity /// 0007265 // Ras protein signal transduction // inferred from electronic annotation /// 0007406 // negative regulation of neuroblast proliferation // inferred from sequence or structural similarity /// 0007406 // negative regulation of neuroblast proliferation // inferred from electronic annotation /// 0007420 // brain development // inferred from sequence or structural similarity /// 0007420 // brain development // inferred from electronic annotation /// 0007422 // peripheral nervous system development // inferred from sequence or structural similarity /// 0007422 // peripheral nervous system development // inferred from electronic annotation /// 0007507 // heart development // inferred from sequence or structural similarity /// 0007507 // heart development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0008542 // visual learning // inferred from sequence or structural similarity /// 0008542 // visual learning // inferred from electronic annotation /// 0014044 // Schwann cell development // inferred from sequence or structural similarity /// 0014044 // Schwann cell development // inferred from electronic annotation /// 0014065 // phosphatidylinositol 3-kinase cascade // inferred from sequence or structural similarity /// 0014065 // phosphatidylinositol 3-kinase cascade // inferred from electronic annotation /// 0016525 // negative regulation of angiogenesis // inferred from electronic annotation /// 0021510 // spinal cord development // inferred from sequence or structural similarity /// 0021510 // spinal cord development // inferred from electronic annotation /// 0021897 // forebrain astrocyte development // inferred from sequence or structural similarity /// 0021897 // forebrain astrocyte development // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from sequence or structural similarity /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0022011 // myelination in peripheral nervous system // inferred from sequence or structural similarity /// 0022011 // myelination in peripheral nervous system // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from sequence or structural similarity /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0030198 // extracellular matrix organization // inferred from sequence or structural similarity /// 0030198 // extracellular matrix organization // inferred from electronic annotation /// 0030199 // collagen fibril organization // inferred from sequence or structural similarity /// 0030199 // collagen fibril organization // inferred from electronic annotation /// 0030325 // adrenal gland development // inferred from sequence or structural similarity /// 0030325 // adrenal gland development // inferred from electronic annotation /// 0030336 // negative regulation of cell migration // inferred from mutant phenotype /// 0030336 // negative regulation of cell migration // inferred from electronic annotation /// 0032228 // regulation of synaptic transmission, GABAergic // inferred from electronic annotation /// 0032318 // regulation of Ras GTPase activity // inferred from mutant phenotype /// 0032320 // positive regulation of Ras GTPase activity // inferred from direct assay /// 0032320 // positive regulation of Ras GTPase activity // inferred from mutant phenotype /// 0032320 // positive regulation of Ras GTPase activity // inferred from sequence or structural similarity /// 0032320 // positive regulation of Ras GTPase activity // inferred from electronic annotation /// 0035021 // negative regulation of Rac protein signal transduction // inferred from electronic annotation /// 0042060 // wound healing // inferred from sequence or structural similarity /// 0042060 // wound healing // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042992 // negative regulation of transcription factor import into nucleus // inferred from sequence or structural similarity /// 0042992 // negative regulation of transcription factor import into nucleus // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from sequence or structural similarity /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043407 // negative regulation of MAP kinase activity // inferred from sequence or structural similarity /// 0043407 // negative regulation of MAP kinase activity // inferred from electronic annotation /// 0043409 // negative regulation of MAPK cascade // inferred from mutant phenotype /// 0043409 // negative regulation of MAPK cascade // inferred from sequence or structural similarity /// 0043409 // negative regulation of MAPK cascade // inferred from electronic annotation /// 0043473 // pigmentation // inferred from sequence or structural similarity /// 0043473 // pigmentation // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from sequence or structural similarity /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0043535 // regulation of blood vessel endothelial cell migration // inferred from mutant phenotype /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0045124 // regulation of bone resorption // inferred from sequence or structural similarity /// 0045124 // regulation of bone resorption // inferred from electronic annotation /// 0045685 // regulation of glial cell differentiation // inferred from sequence or structural similarity /// 0045685 // regulation of glial cell differentiation // inferred from electronic annotation /// 0045762 // positive regulation of adenylate cyclase activity // inferred from sequence or structural similarity /// 0045762 // positive regulation of adenylate cyclase activity // inferred from electronic annotation /// 0045765 // regulation of angiogenesis // inferred from mutant phenotype /// 0045765 // regulation of angiogenesis // inferred from electronic annotation /// 0046580 // negative regulation of Ras protein signal transduction // not recorded /// 0046580 // negative regulation of Ras protein signal transduction // inferred from electronic annotation /// 0046929 // negative regulation of neurotransmitter secretion // inferred from electronic annotation /// 0048147 // negative regulation of fibroblast proliferation // inferred from electronic annotation /// 0048169 // regulation of long-term neuronal synaptic plasticity // inferred from electronic annotation /// 0048485 // sympathetic nervous system development // inferred from sequence or structural similarity /// 0048485 // sympathetic nervous system development // inferred from electronic annotation /// 0048593 // camera-type eye morphogenesis // inferred from sequence or structural similarity /// 0048593 // camera-type eye morphogenesis // inferred from electronic annotation /// 0048712 // negative regulation of astrocyte differentiation // inferred from electronic annotation /// 0048715 // negative regulation of oligodendrocyte differentiation // inferred from sequence or structural similarity /// 0048715 // negative regulation of oligodendrocyte differentiation // inferred from electronic annotation /// 0048745 // smooth muscle tissue development // inferred from sequence or structural similarity /// 0048745 // smooth muscle tissue development // inferred from electronic annotation /// 0048844 // artery morphogenesis // inferred from sequence or structural similarity /// 0048844 // artery morphogenesis // inferred from electronic annotation /// 0048853 // forebrain morphogenesis // inferred from sequence or structural similarity /// 0048853 // forebrain morphogenesis // inferred from electronic annotation /// 0050890 // cognition // inferred from mutant phenotype /// 0051056 // regulation of small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005737 // cytoplasm // not recorded /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0030424 // axon // inferred from direct assay /// 0030425 // dendrite // inferred from direct assay /// 0031235 // intrinsic to internal side of plasma membrane // not recorded","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005099 // Ras GTPase activator activity // inferred from direct assay /// 0005099 // Ras GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr17:29527553-29701451 (+) // 99.91 // q11.2"]
["11751149_x_at",25.210327,21.328943,22.94025,30.155197,24.439213,29.59,0.022408485,-0.21879387,-0.113725185,0.28080034,-0.022408485,0.25350332,0.33217245,0.08338985,-1.2091572,-0.27400184,1.2091572,"down","STRN4",29888,"","0000159 // protein phosphatase type 2A complex // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // non-traceable author statement /// 0005516 // calmodulin binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from direct assay /// 0051721 // protein phosphatase 2A binding // inferred from direct assay /// 0070016 // armadillo repeat domain binding // inferred from physical interaction","chr19:47228589-47250120 (-) // 92.07 // q13.32"]
["11718841_s_at",141.57568,144.88959,154.32402,226.63814,227.07881,244.97545,-0.40160275,-0.36822224,-0.27721405,0.27721405,0.28001642,0.3894601,0.023745572,0.00022286079,-1.5851029,-0.66457653,1.5851029,"down","IL8",3576,"0001525 // angiogenesis // traceable author statement /// 0002237 // response to molecule of bacterial origin // inferred from direct assay /// 0006928 // cellular component movement // traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0007050 // cell cycle arrest // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0019722 // calcium-mediated signaling // traceable author statement /// 0030155 // regulation of cell adhesion // inferred from direct assay /// 0030593 // neutrophil chemotaxis // inferred from genetic interaction /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement /// 0031623 // receptor internalization // inferred from direct assay /// 0035556 // intracellular signal transduction // inferred from direct assay /// 0042119 // neutrophil activation // traceable author statement /// 0044344 // cellular response to fibroblast growth factor stimulus // inferred from expression pattern /// 0045091 // regulation of retroviral genome replication // inferred from direct assay /// 0045744 // negative regulation of G-protein coupled receptor protein signaling pathway // inferred from direct assay /// 0048566 // embryonic digestive tract development // inferred from expression pattern /// 0050930 // induction of positive chemotaxis // inferred from genetic interaction /// 0071222 // cellular response to lipopolysaccharide // inferred from direct assay /// 0071347 // cellular response to interleukin-1 // inferred from expression pattern /// 0071356 // cellular response to tumor necrosis factor // inferred from expression pattern /// 0090023 // positive regulation of neutrophil chemotaxis // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005622 // intracellular // inferred from direct assay","0005125 // cytokine activity // inferred from electronic annotation /// 0005153 // interleukin-8 receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008009 // chemokine activity // inferred from electronic annotation /// 0008009 // chemokine activity // traceable author statement","chr4:74606222-74609433 (+) // 67.34 // q13.3"]
["11764110_s_at",8.231554,7.279767,7.8187966,8.798099,7.8187966,7.84573,0.07173753,-0.10553479,-0.002480507,0.16776443,-0.002480507,0.002480507,0.7174537,0.42123446,-1.0482727,-0.06801411,1.0482727,"down","ID4",3400,"0000082 // G1/S transition of mitotic cell cycle // inferred from electronic annotation /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0007405 // neuroblast proliferation // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0021766 // hippocampus development // inferred from electronic annotation /// 0021895 // cerebral cortex neuron differentiation // inferred from electronic annotation /// 0022010 // central nervous system myelination // inferred from electronic annotation /// 0034613 // cellular protein localization // inferred from electronic annotation /// 0045444 // fat cell differentiation // inferred from electronic annotation /// 0045599 // negative regulation of fat cell differentiation // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045669 // positive regulation of osteoblast differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0048712 // negative regulation of astrocyte differentiation // inferred from electronic annotation /// 0048715 // negative regulation of oligodendrocyte differentiation // inferred from electronic annotation","0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0001085 // RNA polymerase II transcription factor binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr6:19841684-19842425 (+) // 95.87 // p22.3"]
["11731530_a_at",21.696058,25.32043,25.581097,25.856009,22.932238,25.559883,-0.2296586,-0.0067896843,0.007986546,0.023407936,-0.14971447,0.0067896843,0.89130294,0.7206173,-1.0254911,-0.036314998,1.0254911,"down","DOK1",1796,"0007165 // signal transduction // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0007265 // Ras protein signal transduction // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005057 // receptor signaling protein activity // inferred from electronic annotation /// 0005158 // insulin receptor binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation","chr2:74781228-74784673 (+) // 93.1 // p13.1"]
["11717894_s_at",945.56866,853.7478,926.8264,1751.7728,1723.6547,1530.6466,-0.34744358,-0.49481583,-0.37632656,0.5421181,0.5187731,0.34744358,0.027066398,0.00032660956,-1.8348222,-0.8756402,1.8348222,"down","PTP4A1",7803,"0006470 // protein dephosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // non-traceable author statement /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005819 // spindle // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009898 // internal side of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // non-traceable author statement /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr6:64281916-64293491 (+) // 94.31 // q12"]
["11716021_x_at",878.2287,790.53424,808.40137,842.98114,682.52844,698.70734,0.13564682,-0.016121864,0.016121864,0.07655048,-0.22806072,-0.19426155,0.5208842,0.20765696,1.1176534,0.16047281,1.1176534,"up","RAD23A",5886,"0006281 // DNA repair // inferred from electronic annotation /// 0006289 // nucleotide-excision repair // inferred from direct assay /// 0006289 // nucleotide-excision repair // inferred from electronic annotation /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0032434 // regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045070 // positive regulation of viral genome replication // inferred from mutant phenotype","0000502 // proteasome complex // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003684 // damaged DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0031593 // polyubiquitin binding // inferred from direct assay","chr19:13056627-13064456 (+) // 93.81 // p13.2"]
["11738045_a_at",26.025385,28.114796,35.36477,27.78911,30.217875,33.760933,-0.16344643,-0.052036285,0.27894688,-0.068846226,0.052036285,0.21198893,0.9223827,0.7920301,-1.0309004,-0.043904897,1.0309004,"down","LRAT",9227,"0001523 // retinoid metabolic process // traceable author statement /// 0006776 // vitamin A metabolic process // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0008202 // steroid metabolic process // traceable author statement /// 0009790 // embryo development // inferred from electronic annotation /// 0042572 // retinol metabolic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0050896 // response to stimulus // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005771 // multivesicular body // inferred from sequence or structural similarity /// 0005771 // multivesicular body // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005791 // rough endoplasmic reticulum // inferred from sequence or structural similarity /// 0005791 // rough endoplasmic reticulum // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from sequence or structural similarity /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0001972 // retinoic acid binding // inferred from electronic annotation /// 0008374 // O-acyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // traceable author statement /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0019841 // retinol binding // inferred from electronic annotation /// 0047173 // phosphatidylcholine-retinol O-acyltransferase activity // inferred from electronic annotation","chr4:155665122-155674270 (+) // 85.12 // q32.1"]
["11733881_at",377.4043,462.8294,464.76672,472.664,490.48026,471.94873,-0.31145763,-0.017087936,-0.011061668,0.013246536,0.06662655,0.011061668,0.54475325,0.22759536,-1.1045923,-0.143514,1.1045923,"down","TTF1",7270,"0006338 // chromatin remodeling // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006353 // transcription termination, DNA-dependent // non-traceable author statement /// 0006353 // transcription termination, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006360 // transcription from RNA polymerase I promoter // traceable author statement /// 0006361 // transcription initiation from RNA polymerase I promoter // inferred from electronic annotation /// 0006363 // termination of RNA polymerase I transcription // traceable author statement /// 0006363 // termination of RNA polymerase I transcription // inferred from electronic annotation /// 0008156 // negative regulation of DNA replication // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation","chr9:135250938-135278216 (-) // 87.84 // q34.13"]
["11735066_at",13.066066,12.624714,12.852832,12.750673,13.179366,11.84932,0.029495,-0.020079374,0.005756378,-0.0057566166,0.04195094,-0.111525536,0.80806553,0.5603046,1.0211308,0.030167678,1.0211308,"up","ITGB3",3690,"0001934 // positive regulation of protein phosphorylation // traceable author statement /// 0001938 // positive regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0002576 // platelet degranulation // traceable author statement /// 0007155 // cell adhesion // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // traceable author statement /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0010595 // positive regulation of endothelial cell migration // inferred from mutant phenotype /// 0010745 // negative regulation of macrophage derived foam cell differentiation // inferred from mutant phenotype /// 0010888 // negative regulation of lipid storage // inferred from mutant phenotype /// 0014909 // smooth muscle cell migration // inferred from mutant phenotype /// 0030168 // platelet activation // inferred from mutant phenotype /// 0030168 // platelet activation // traceable author statement /// 0030949 // positive regulation of vascular endothelial growth factor receptor signaling pathway // traceable author statement /// 0032147 // activation of protein kinase activity // inferred from mutant phenotype /// 0032369 // negative regulation of lipid transport // inferred from mutant phenotype /// 0035295 // tube development // traceable author statement /// 0042060 // wound healing // inferred by curator /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045124 // regulation of bone resorption // traceable author statement /// 0045715 // negative regulation of low-density lipoprotein particle receptor biosynthetic process // inferred from mutant phenotype /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from mutant phenotype /// 0050748 // negative regulation of lipoprotein metabolic process // inferred from mutant phenotype /// 0050900 // leukocyte migration // traceable author statement /// 0060055 // angiogenesis involved in wound healing // traceable author statement /// 0070527 // platelet aggregation // inferred from mutant phenotype","0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0008305 // integrin complex // inferred from direct assay /// 0008305 // integrin complex // inferred from electronic annotation /// 0008305 // integrin complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031092 // platelet alpha granule membrane // traceable author statement /// 0042470 // melanosome // inferred from direct assay /// 0071062 // alphav-beta3 integrin-vitronectin complex // traceable author statement","0003756 // protein disulfide isomerase activity // inferred from direct assay /// 0004872 // receptor activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from electronic annotation /// 0005161 // platelet-derived growth factor receptor binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0043184 // vascular endothelial growth factor receptor 2 binding // inferred from physical interaction /// 0043184 // vascular endothelial growth factor receptor 2 binding // traceable author statement /// 0050839 // cell adhesion molecule binding // inferred from physical interaction","chr17:45331192-45390501 (+) // 90.25 // q21.32"]
["11717889_s_at",806.28265,877.50507,892.26984,750.7228,760.7203,831.0687,-0.02184105,0.10028076,0.12435341,-0.12484646,-0.105760574,0.02184105,0.36553437,0.10078896,1.0997583,0.13718644,1.0997583,"up","GNAI2",2771,"0000186 // activation of MAPKK activity // inferred from electronic annotation /// 0001973 // adenosine receptor signaling pathway // not recorded /// 0001973 // adenosine receptor signaling pathway // inferred from electronic annotation /// 0006184 // GTP catabolic process // not recorded /// 0006184 // GTP catabolic process // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from sequence or structural similarity /// 0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // traceable author statement /// 0007193 // adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007194 // negative regulation of adenylate cyclase activity // traceable author statement /// 0007213 // G-protein coupled acetylcholine receptor signaling pathway // inferred from electronic annotation /// 0007214 // gamma-aminobutyric acid signaling pathway // not recorded /// 0007214 // gamma-aminobutyric acid signaling pathway // inferred from electronic annotation /// 0007243 // intracellular protein kinase cascade // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007584 // response to nutrient // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0043434 // response to peptide hormone stimulus // inferred from sequence or structural similarity /// 0050805 // negative regulation of synaptic transmission // inferred from electronic annotation /// 0051301 // cell division // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation /// 0051927 // negative regulation of calcium ion transport via voltage-gated calcium channel activity // not recorded /// 0051927 // negative regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from electronic annotation","0005624 // membrane fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005834 // heterotrimeric G-protein complex // not recorded /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from direct assay /// 0031234 // extrinsic to internal side of plasma membrane // not recorded /// 0045121 // membrane raft // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0001664 // G-protein coupled receptor binding // not recorded /// 0003924 // GTPase activity // not recorded /// 0003924 // GTPase activity // traceable author statement /// 0004871 // signal transducer activity // not recorded /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from sequence or structural similarity /// 0019001 // guanyl nucleotide binding // inferred from electronic annotation /// 0031683 // G-protein beta/gamma-subunit complex binding // not recorded /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:50266496-50296787 (+) // 53.5 // p21.31"]
["11760392_s_at",165.55002,128.54573,127.56743,162.35828,152.20477,130.72232,0.23100758,-0.13397789,-0.1449995,0.20292139,0.10975361,-0.109754086,0.83902645,0.61691624,-1.0596812,-0.08363027,1.0596812,"down","SUGP2",10147,"0006396 // RNA processing // inferred from electronic annotation /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chr19:19101701-19141839 (-) // 98.44 // p13.11"]
["11735307_at",15.678328,15.292607,14.426215,16.277863,14.988648,15.506817,0.025902987,-0.010034084,-0.09417558,0.08004284,-0.038998365,0.010034323,0.7262643,0.43354607,-1.0303457,-0.04312844,1.0303457,"down","C9orf139",401563,"","","","chr9:139921915-139931569 (+) // 92.95 // q34.3"]
["11722704_a_at",12.0119095,16.856232,16.367695,14.343877,16.478193,12.669508,-0.35117722,0.13763905,0.09520817,-0.09520793,0.10491514,-0.27428246,0.9300847,0.8110288,1.0343672,0.048748437,1.0343672,"up","DZIP1",22873,"0007275 // multicellular organismal development // inferred from electronic annotation /// 0007281 // germ cell development // non-traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0042384 // cilium assembly // inferred from mutant phenotype","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005814 // centriole // inferred from direct assay /// 0036064 // cilium basal body // inferred from direct assay /// 0043234 // protein complex // non-traceable author statement","0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr13:96230455-96296957 (-) // 85.27 // q32.1"]
["11747644_s_at",16.384842,14.865215,13.794847,15.554236,14.102294,18.32369,0.10773778,-0.03268361,-0.14049459,0.03268361,-0.10869408,0.26908612,0.8011656,0.54822665,-1.0615498,-0.08617203,1.0615498,"down","LIMS3 /// LIMS3-LOC440895 /// LIMS3L","100271835 /// 100288695 /// 96626","","0005737 // cytoplasm // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:110656239-110738377 (+) // 94.46 // q13 /// chr2:109271464-109297226 (+) // 91.74 // q12.3 /// chr2:111204661-111230421 (-) // 92.48 // q13"]
["11758854_at",1608.4122,1583.0294,1656.7513,1571.9967,1655.7233,1549.223,0.011474609,-0.011474609,0.05419445,-0.021564484,0.05329895,-0.042617798,0.8118268,0.5677959,1.0151498,0.021692678,1.0151498,"up","ATL3",25923,"0006184 // GTP catabolic process // non-traceable author statement /// 0006184 // GTP catabolic process // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from mutant phenotype /// 0007029 // endoplasmic reticulum organization // inferred from mutant phenotype /// 0007030 // Golgi organization // inferred from mutant phenotype /// 0051260 // protein homooligomerization // inferred from direct assay","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // non-traceable author statement /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from direct assay","chr11:63391553-63439385 (-) // 84.44 // q12.3"]
["11724162_a_at",132.33894,129.7945,126.43233,157.8579,142.33473,118.16073,0.0140042305,-0.0140042305,-0.051867962,0.26839304,0.11905432,-0.1494832,0.7570284,0.47855666,-1.0692586,-0.09661077,1.0692586,"down","GXYLT1",283464,"0016266 // O-glycan processing // inferred from direct assay","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation /// 0016763 // transferase activity, transferring pentosyl groups // inferred from electronic annotation /// 0035252 // UDP-xylosyltransferase activity // inferred from direct assay","chr12:42475646-42538673 (-) // 87.68 // q12"]
["11750409_a_at",8.3257265,10.95874,9.983405,11.012009,13.184708,9.300791,-0.32919526,0.06723881,-0.067239046,0.074234486,0.33402252,-0.16941786,0.6770118,0.36674726,-1.1402458,-0.18934485,1.1402458,"down","TMTC2",160335,"","0005783 // endoplasmic reticulum // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:83081259-83526365 (+) // 99.96 // q21.31"]
["11752164_x_at",191.22285,161.93185,155.24518,204.48279,173.00015,161.24007,0.19217491,-0.04769373,-0.108531475,0.28889942,0.04769373,-0.053869724,0.81936806,0.5804817,-1.0586736,-0.08225789,1.0586736,"down","KDM2B",84678,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from sequence or structural similarity /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016577 // histone demethylation // traceable author statement /// 0021555 // midbrain-hindbrain boundary morphogenesis // inferred from sequence or structural similarity /// 0021555 // midbrain-hindbrain boundary morphogenesis // inferred from electronic annotation /// 0021592 // fourth ventricle development // inferred from sequence or structural similarity /// 0021592 // fourth ventricle development // inferred from electronic annotation /// 0021670 // lateral ventricle development // inferred from sequence or structural similarity /// 0021670 // lateral ventricle development // inferred from electronic annotation /// 0021678 // third ventricle development // inferred from sequence or structural similarity /// 0021678 // third ventricle development // inferred from electronic annotation /// 0021993 // initiation of neural tube closure // inferred from sequence or structural similarity /// 0021993 // initiation of neural tube closure // inferred from electronic annotation /// 0030900 // forebrain development // inferred from sequence or structural similarity /// 0030900 // forebrain development // inferred from electronic annotation /// 0030901 // midbrain development // inferred from sequence or structural similarity /// 0030901 // midbrain development // inferred from electronic annotation /// 0030902 // hindbrain development // inferred from sequence or structural similarity /// 0030902 // hindbrain development // inferred from electronic annotation /// 0035518 // histone H2A monoubiquitination // inferred from direct assay /// 0043524 // negative regulation of neuron apoptotic process // inferred from sequence or structural similarity /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0048596 // embryonic camera-type eye morphogenesis // inferred from sequence or structural similarity /// 0048596 // embryonic camera-type eye morphogenesis // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation /// 0070544 // histone H3-K36 demethylation // inferred from electronic annotation /// 2000178 // negative regulation of neural precursor cell proliferation // inferred from sequence or structural similarity /// 2000178 // negative regulation of neural precursor cell proliferation // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0031519 // PcG protein complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0019843 // rRNA binding // inferred from electronic annotation /// 0032452 // histone demethylase activity // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051864 // histone demethylase activity (H3-K36 specific) // inferred from electronic annotation","chr12:121867673-122018859 (-) // 99.02 // q24.31"]
["11741773_x_at",444.66162,395.5782,424.3842,500.71567,453.0895,460.5137,-0.013544083,-0.18228912,-0.08088112,0.15773964,0.013544083,0.036992073,0.30651176,0.07144397,-1.118576,-0.16166334,1.118576,"down","TCEA2",6919,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006354 // transcription elongation, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006414 // translational elongation // inferred from electronic annotation /// 0032784 // regulation of transcription elongation, DNA-dependent // inferred from electronic annotation /// 0032784 // regulation of transcription elongation, DNA-dependent // non-traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0008023 // transcription elongation factor complex // non-traceable author statement","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:62688438-62703700 (+) // 93.92 // q13.33"]
["11747222_a_at",431.68573,342.22183,293.77667,363.64954,253.25058,321.72586,0.37959957,0.044549942,-0.17566204,0.13216686,-0.38981628,-0.044549942,0.7419523,0.45593056,1.1356846,0.18356223,1.1356846,"up","CAPN1",823,"0006508 // proteolysis // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0016540 // protein autoprocessing // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005626 // insoluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004198 // calcium-dependent cysteine-type endopeptidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr11:64949488-64979472 (+) // 95.23 // q13.1"]
["11762280_a_at",190.38957,219.08476,203.37611,193.12727,255.27716,230.75473,-0.14886475,0.053669453,-0.053668976,-0.12826777,0.2742448,0.12854052,0.65836716,0.3432919,-1.1027664,-0.14112721,1.1027664,"down","EIF4A1",1973,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006413 // translational initiation // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0031100 // organ regeneration // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0016281 // eukaryotic translation initiation factor 4F complex // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0000339 // RNA cap binding // traceable author statement /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // traceable author statement /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0004386 // helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation","chr17:7476143-7479039 (+) // 98.46 // p13.1"]
["11743444_s_at",1128.7524,817.42737,765.1973,2325.3872,1376.4058,1462.7217,-0.14308834,-0.608655,-0.7039137,0.89965343,0.14308834,0.23083782,0.21979862,0.036838397,-1.8787142,-0.90974563,1.8787142,"down","RHOB",388,"0001525 // angiogenesis // inferred from electronic annotation /// 0006184 // GTP catabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006927 // transformed cell apoptotic process // inferred from sequence or structural similarity /// 0006927 // transformed cell apoptotic process // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from sequence or structural similarity /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007266 // Rho protein signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0008333 // endosome to lysosome transport // inferred from direct assay /// 0015031 // protein transport // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030168 // platelet activation // traceable author statement /// 0033205 // cell cycle cytokinesis // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0045766 // positive regulation of angiogenesis // inferred from sequence or structural similarity /// 0045766 // positive regulation of angiogenesis // inferred from electronic annotation /// 0045786 // negative regulation of cell cycle // inferred from sequence or structural similarity /// 0045786 // negative regulation of cell cycle // inferred from electronic annotation /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0070301 // cellular response to hydrogen peroxide // inferred from direct assay /// 0071479 // cellular response to ionizing radiation // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation /// 0032154 // cleavage furrow // inferred from direct assay /// 0032154 // cleavage furrow // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // traceable author statement /// 0005525 // GTP binding // inferred from electronic annotation /// 0019003 // GDP binding // inferred from electronic annotation","chr2:20646831-20649206 (+) // 95.54 // p24.1"]
["11740072_s_at",191.65717,194.80635,202.2908,250.94753,213.20427,217.22844,-0.115805626,-0.092292786,-0.037902832,0.27305222,0.037902832,0.06487942,0.2719317,0.056132436,-1.1545084,-0.20727861,1.1545084,"down","MIER1",57708,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype /// 0031937 // positive regulation of chromatin silencing // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction","chr1:67390577-67454302 (+) // 96.16 // p31.3"]
["11750491_a_at",132.22285,167.26697,169.72597,128.54185,146.72287,165.1753,-0.23557472,0.1036067,0.124661446,-0.27630758,-0.08545256,0.08545256,0.82976097,0.59770674,1.0641246,0.08966707,1.0641246,"up","SEC14L1",6397,"0006810 // transport // inferred from electronic annotation","0005794 // Golgi apparatus // traceable author statement /// 0016020 // membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005488 // binding // traceable author statement","chr17:75202746-75210724 (+) // 100.0 // q25.2"]
["11737062_a_at",29.319176,40.517242,34.869823,39.778717,32.643692,41.13446,-0.34514332,0.121548176,-0.09500885,0.09500885,-0.19018364,0.14335966,0.77967894,0.5125566,-1.0884408,-0.12226291,1.0884408,"down","MTMR3",8897,"0006470 // protein dephosphorylation // inferred from direct assay /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from direct assay /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0046856 // phosphatidylinositol dephosphorylation // inferred from direct assay","0005624 // membrane fraction // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004438 // phosphatidylinositol-3-phosphatase activity // inferred from direct assay /// 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr22:30279157-30426855 (+) // 99.68 // q12.2"]
["11759705_x_at",32.603493,33.873108,23.424717,27.87936,23.876026,25.849548,0.2803583,0.3354721,-0.19663668,0.05452919,-0.16910553,-0.05452919,0.65517247,0.3392121,1.1455971,0.19609974,1.1455971,"up","IGLC1",3537,"0006955 // immune response // non-traceable author statement /// 0006956 // complement activation // traceable author statement /// 0006958 // complement activation, classical pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0050776 // regulation of immune response // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005886 // plasma membrane // traceable author statement","0003823 // antigen binding // non-traceable author statement /// 0003823 // antigen binding // inferred from electronic annotation","chr22:23154240-23243614 (+) // 84.89 // q11.22"]
["11726831_at",116.77322,96.88957,99.62743,72.59985,66.46691,76.22289,0.44235468,0.17305803,0.21326017,-0.2433157,-0.37064648,-0.17305803,0.09229032,0.006142842,1.4525263,0.5385643,1.4525263,"up","ANTXR1",84168,"0022414 // reproductive process // inferred from electronic annotation /// 0031532 // actin cytoskeleton reorganization // inferred from direct assay /// 0034446 // substrate adhesion-dependent cell spreading // inferred from direct assay","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031258 // lamellipodium membrane // inferred from direct assay /// 0031258 // lamellipodium membrane // inferred from electronic annotation /// 0031527 // filopodium membrane // inferred from direct assay /// 0031527 // filopodium membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005518 // collagen binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from direct assay","chr2:69240275-69373544 (+) // 90.14 // p13.3"]
["11720385_a_at",86.95217,89.51822,87.09918,90.545425,99.14885,96.90062,-0.05018902,-0.008230209,-0.047751427,0.008230686,0.13918543,0.106095314,0.24289748,0.044919394,-1.086655,-0.119894,1.086655,"down","MRC2",9902,"0006897 // endocytosis // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr17:60704761-60770953 (+) // 94.36 // q23.2"]
["11730855_a_at",1091.4956,913.66693,921.3782,1117.7988,889.4179,799.809,0.25050354,-0.0060625076,0.0060625076,0.28485775,-0.044869423,-0.1980753,0.8794943,0.6954406,1.0493749,0.06953024,1.0493749,"up","HMGN3",9324,"0016568 // chromatin modification // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0061178 // regulation of insulin secretion involved in cellular response to glucose stimulus // inferred from electronic annotation","0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0031492 // nucleosomal DNA binding // inferred from electronic annotation /// 0046966 // thyroid hormone receptor binding // non-traceable author statement","chr6:79910961-79944557 (-) // 97.71 // q14.1"]
["11751407_a_at",62.16977,75.07367,76.0091,53.13427,68.14542,79.25032,-0.20224857,0.0698452,0.08771038,-0.42881918,-0.0698452,0.14795494,0.8433199,0.62432784,1.0732644,0.102005474,1.0732644,"up","CHRND",1144,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006936 // muscle contraction // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007268 // synaptic transmission // traceable author statement /// 0048630 // skeletal muscle tissue growth // inferred from mutant phenotype /// 0050881 // musculoskeletal movement // inferred from mutant phenotype /// 0050905 // neuromuscular process // non-traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005892 // acetylcholine-gated channel complex // inferred from electronic annotation /// 0005892 // acetylcholine-gated channel complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // non-traceable author statement /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004889 // acetylcholine-activated cation-selective channel activity // inferred from electronic annotation /// 0004889 // acetylcholine-activated cation-selective channel activity // traceable author statement /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0042166 // acetylcholine binding // inferred from electronic annotation","chr2:233390897-233400076 (+) // 99.85 // q37.1"]
["11737356_a_at",12.966897,10.649208,10.665648,11.557374,11.629641,11.351101,0.17901015,-0.10507679,-0.10285115,0.012990475,0.021983624,-0.012990475,0.95236146,0.8668043,-1.0118302,-0.01696722,1.0118302,"down","C3orf55",152078,"","","","chr3:157261158-157319028 (+) // 81.68 // q25.32"]
["11758815_a_at",23.889524,17.044262,19.415394,21.275743,22.285067,18.24201,0.2331729,-0.25391912,-0.06600428,0.06600428,0.1328721,-0.15594053,0.9289443,0.80800414,-1.0304173,-0.043228753,1.0304173,"down","KDM5B",10765,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0034720 // histone H3-K4 demethylation // inferred from direct assay /// 0034720 // histone H3-K4 demethylation // inferred from electronic annotation /// 0034721 // histone H3-K4 demethylation, trimethyl-H3-K4-specific // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from electronic annotation /// 0032453 // histone demethylase activity (H3-K4 specific) // inferred from electronic annotation /// 0034647 // histone demethylase activity (H3-trimethyl-K4 specific) // inferred from direct assay /// 0034648 // histone demethylase activity (H3-dimethyl-K4 specific) // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:202696344-202778598 (-) // 90.96 // q32.1"]
["11761239_at",11.073777,13.617431,11.574461,14.220014,13.676211,16.083817,-0.30141425,-0.0031073093,-0.23761654,0.05936122,0.003107071,0.23704815,0.30554584,0.07103113,-1.2146591,-0.28055146,1.2146591,"down","ZDHHC20",253832,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr13:21928088-22033507 (-) // 72.91 // q12.11"]
["11763728_a_at",341.1519,375.12103,332.25372,367.6167,367.93713,395.1219,-0.10841656,0.028525352,-0.14654541,-0.0006284714,0.0006284714,0.10346699,0.45532733,0.15766613,-1.0792042,-0.10996787,1.0792042,"down","FKBP9",11328,"0000413 // protein peptidyl-prolyl isomerization // not recorded /// 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006457 // protein folding // inferred from sequence or structural similarity /// 0006457 // protein folding // inferred from electronic annotation /// 0018208 // peptidyl-proline modification // not recorded","0005783 // endoplasmic reticulum // not recorded /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0016020 // membrane // not recorded","0003755 // peptidyl-prolyl cis-trans isomerase activity // not recorded /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005528 // FK506 binding // not recorded /// 0016853 // isomerase activity // inferred from electronic annotation","chr7:32997049-33028710 (+) // 88.85 // p14.3"]
["11728722_s_at",903.6499,933.8903,977.4134,1089.5571,1124.5438,975.50665,-0.11179638,-0.06430721,0.001408577,0.15810966,0.2037077,-0.001408577,0.29153574,0.06419747,-1.131603,-0.17836791,1.131603,"down","VPS29",51699,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004647 // phosphoserine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:110928947-110939932 (-) // 50.61 // q24.11"]
["11753720_x_at",215.12787,199.97533,204.35435,173.5711,184.09052,177.16307,0.16507578,0.05970335,0.09095478,-0.14459229,-0.059703827,-0.11504078,0.091890976,0.006086998,1.1580442,0.21169034,1.1580442,"up","GMFB",2764,"0006468 // protein phosphorylation // traceable author statement /// 0006469 // negative regulation of protein kinase activity // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0043085 // positive regulation of catalytic activity // traceable author statement","0005622 // intracellular // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0004860 // protein kinase inhibitor activity // traceable author statement /// 0004871 // signal transducer activity // traceable author statement /// 0008047 // enzyme activator activity // traceable author statement /// 0008083 // growth factor activity // inferred from electronic annotation","chr14:54944808-54950486 (-) // 99.53 // q22.2"]
["11756765_x_at",345.88962,319.0436,329.92853,280.25647,281.79797,305.02,0.148983,0.032424927,0.08082485,-0.15458107,-0.14666748,-0.032424927,0.15709078,0.018740535,1.1476123,0.19863537,1.1476123,"up","BCL2L13",23786,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // non-traceable author statement /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // non-traceable author statement /// 0042981 // regulation of apoptotic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005739 // mitochondrion // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","0008656 // cysteine-type endopeptidase activator activity involved in apoptotic process // non-traceable author statement","chr22:18138424-18185210 (+) // 69.02 // q11.21"]
["11735160_at",48.273792,60.88936,55.175663,52.05918,63.769527,60.447674,-0.2586193,0.07633066,-0.06582737,-0.14970684,0.14300776,0.06582737,0.75585395,0.47720024,-1.0735689,-0.10241484,1.0735689,"down","KCNAB3",9196,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // traceable author statement /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005249 // voltage-gated potassium channel activity // inferred from electronic annotation /// 0015459 // potassium channel regulator activity // traceable author statement","chr17:7825176-7832753 (-) // 98.05 // p13.1"]
["11740643_a_at",8.355389,9.865383,6.437861,8.2423,10.966494,7.7668777,0.009829998,0.24949813,-0.36629558,-0.009829998,0.40215325,-0.095541954,0.8302067,0.59906524,-1.0977755,-0.134583,1.0977755,"down","CYP4F8",11283,"0006690 // icosanoid metabolic process // traceable author statement /// 0006693 // prostaglandin metabolic process // traceable author statement /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004497 // monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0018685 // alkane 1-monooxygenase activity // traceable author statement /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070330 // aromatase activity // inferred from electronic annotation","chr19:15726031-15740448 (+) // 97.1 // p13.12"]
["11720665_s_at",2730.3718,2845.972,2719.4543,3017.9075,2772.555,2813.397,-0.03266716,0.02715683,-0.03844738,0.11178303,-0.010548592,0.010548592,0.61553645,0.2956507,-1.036639,-0.05191354,1.036639,"down","SYNCRIP",10492,"0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0070934 // CRD-mediated mRNA stabilization // inferred from mutant phenotype","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // traceable author statement /// 0070937 // CRD-mediated mRNA stability complex // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay /// 0071204 // histone pre-mRNA 3'end processing complex // inferred from sequence or structural similarity /// 0071204 // histone pre-mRNA 3'end processing complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008143 // poly(A) RNA binding // inferred from electronic annotation","chr6:86323502-86353046 (-) // 92.96 // q14.3"]
["11761376_a_at",6.8607855,7.3765182,8.339146,6.7826447,7.706204,8.344945,-0.13610649,-0.031540155,0.14541936,-0.15263224,0.031540394,0.14642239,0.96477693,0.9010629,-1.0110488,-0.015852625,1.0110488,"down","ZNF90",7643,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006412 // translation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005840 // ribosome // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:20188805-20237885 (+) // 68.52 // p12"]
["11739418_at",15.871416,13.699697,14.180689,13.933599,14.269687,14.096443,0.16680121,-0.045485497,0.0042984486,-0.02106142,0.013324261,-0.0042984486,0.7833678,0.5183499,1.032315,0.045883283,1.032315,"up","IRGQ",126298,"","","","chr19:44088520-44100289 (-) // 54.34 // q13.31"]
["11737326_a_at",542.0041,484.9111,461.68933,641.69275,549.7237,539.057,0.003932953,-0.15665054,-0.22744846,0.24751186,0.024335861,-0.003932953,0.3791028,0.10859248,-1.1615304,-0.21602689,1.1615304,"down","SLC6A9",6536,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0006865 // amino acid transport // inferred from electronic annotation /// 0015816 // glycine transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005283 // sodium:amino acid symporter activity // inferred from electronic annotation /// 0005328 // neurotransmitter:sodium symporter activity // inferred from electronic annotation /// 0015187 // glycine transmembrane transporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation /// 0015375 // glycine:sodium symporter activity // traceable author statement","chr1:44462154-44482997 (-) // 99.88 // p34.1"]
["11733979_at",12.145353,10.383279,11.19587,11.148652,11.847997,11.763017,0.081792116,-0.14435029,-0.035645485,-0.04174304,0.046031237,0.035645723,0.80317765,0.55159825,-1.0324314,-0.046045873,1.0324314,"down","CD28",940,"0002863 // positive regulation of inflammatory response to antigenic stimulus // inferred from electronic annotation /// 0006955 // immune response // inferred from electronic annotation /// 0006959 // humoral immune response // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // inferred from electronic annotation /// 0016032 // viral reproduction // traceable author statement /// 0031295 // T cell costimulation // traceable author statement /// 0031295 // T cell costimulation // inferred from electronic annotation /// 0042089 // cytokine biosynthetic process // traceable author statement /// 0042102 // positive regulation of T cell proliferation // inferred from direct assay /// 0042102 // positive regulation of T cell proliferation // inferred from sequence or structural similarity /// 0042102 // positive regulation of T cell proliferation // traceable author statement /// 0042102 // positive regulation of T cell proliferation // inferred from electronic annotation /// 0042110 // T cell activation // inferred from electronic annotation /// 0045060 // negative thymic T cell selection // inferred from electronic annotation /// 0045066 // regulatory T cell differentiation // inferred from direct assay /// 0045070 // positive regulation of viral genome replication // non-traceable author statement /// 0045086 // positive regulation of interleukin-2 biosynthetic process // inferred from direct assay /// 0045086 // positive regulation of interleukin-2 biosynthetic process // inferred from sequence or structural similarity /// 0045086 // positive regulation of interleukin-2 biosynthetic process // inferred from electronic annotation /// 0045727 // positive regulation of translation // non-traceable author statement /// 0045768 // positive regulation of anti-apoptosis // traceable author statement /// 0045840 // positive regulation of mitosis // inferred from direct assay /// 0045840 // positive regulation of mitosis // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046641 // positive regulation of alpha-beta T cell proliferation // inferred from electronic annotation /// 0048304 // positive regulation of isotype switching to IgG isotypes // inferred from electronic annotation /// 0050690 // regulation of defense response to virus by virus // traceable author statement","0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation","0002020 // protease binding // inferred from physical interaction /// 0005070 // SH3/SH2 adaptor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0015026 // coreceptor activity // traceable author statement /// 0042802 // identical protein binding // non-traceable author statement /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr2:204571197-204602556 (+) // 85.71 // q33.2"]
["11731370_a_at",7.711767,8.787518,7.34398,7.6335163,9.568329,9.199252,-0.094197035,0.09419727,-0.16469622,-0.10891056,0.21700859,0.1602583,0.6362894,0.3184857,-1.1052332,-0.1443508,1.1052332,"down","NODAL",4838,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0001702 // gastrulation with mouth forming second // inferred from electronic annotation /// 0001707 // mesoderm formation // inferred from electronic annotation /// 0001829 // trophectodermal cell differentiation // inferred from electronic annotation /// 0001831 // trophectodermal cellular morphogenesis // inferred from electronic annotation /// 0001842 // neural fold formation // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0001892 // embryonic placenta development // inferred from electronic annotation /// 0001944 // vasculature development // inferred from electronic annotation /// 0001947 // heart looping // inferred from electronic annotation /// 0002085 // inhibition of neuroepithelial cell differentiation // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from electronic annotation /// 0007369 // gastrulation // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0007492 // endoderm development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0009880 // embryonic pattern specification // inferred from electronic annotation /// 0009948 // anterior/posterior axis specification // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0009966 // regulation of signal transduction // inferred from electronic annotation /// 0010085 // polarity specification of proximal/distal axis // inferred from electronic annotation /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from mutant phenotype /// 0016477 // cell migration // inferred from electronic annotation /// 0019827 // stem cell maintenance // inferred from electronic annotation /// 0022409 // positive regulation of cell-cell adhesion // inferred from mutant phenotype /// 0030324 // lung development // inferred from electronic annotation /// 0032924 // activin receptor signaling pathway // inferred from electronic annotation /// 0032927 // positive regulation of activin receptor signaling pathway // inferred from genetic interaction /// 0033505 // floor plate morphogenesis // inferred from electronic annotation /// 0035050 // embryonic heart tube development // inferred from electronic annotation /// 0040007 // growth // inferred from electronic annotation /// 0042074 // cell migration involved in gastrulation // inferred from electronic annotation /// 0043280 // positive regulation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0045165 // cell fate commitment // inferred from electronic annotation /// 0045596 // negative regulation of cell differentiation // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048327 // axial mesodermal cell fate specification // inferred from electronic annotation /// 0048382 // mesendoderm development // inferred from electronic annotation /// 0048546 // digestive tract morphogenesis // inferred from electronic annotation /// 0048646 // anatomical structure formation involved in morphogenesis // inferred from electronic annotation /// 0048701 // embryonic cranial skeleton morphogenesis // inferred from electronic annotation /// 0048729 // tissue morphogenesis // inferred from electronic annotation /// 0048859 // formation of anatomical boundary // inferred from electronic annotation /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from mutant phenotype /// 0055123 // digestive system development // inferred from electronic annotation /// 0060136 // embryonic process involved in female pregnancy // inferred from electronic annotation /// 0060395 // SMAD protein signal transduction // inferred from electronic annotation /// 0060460 // left lung morphogenesis // inferred from electronic annotation /// 0060802 // epiblast cell-extraembryonic ectoderm cell signaling involved in anterior/posterior axis specification // inferred from electronic annotation /// 0070374 // positive regulation of ERK1 and ERK2 cascade // inferred from mutant phenotype /// 0090009 // primitive streak formation // inferred from electronic annotation /// 0090010 // transforming growth factor beta receptor signaling pathway involved in primitive streak formation // inferred from electronic annotation /// 1900224 // positive regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry // inferred from sequence or structural similarity","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation","chr10:72191450-72201466 (-) // 84.95 // q22.1"]
["11717798_at",106.41194,100.35616,102.3818,75.72928,87.32266,92.66589,0.14204073,0.0575099,0.08633995,-0.3486967,-0.14319086,-0.057509422,0.21832891,0.0363108,1.2128736,0.27842918,1.2128736,"up","ZER1",10444,"0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from mutant phenotype /// 0051438 // regulation of ubiquitin-protein ligase activity // inferred from mutant phenotype","0000221 // vacuolar proton-transporting V-type ATPase, V1 domain // inferred from electronic annotation /// 0031462 // Cul2-RING ubiquitin ligase complex // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // inferred from mutant phenotype /// 0046961 // proton-transporting ATPase activity, rotational mechanism // inferred from electronic annotation","chr9:131492064-131534210 (-) // 95.8 // q34.11"]
["11759680_a_at",61.40372,62.096066,60.282074,74.708984,65.734985,63.145477,-0.028264523,-0.012088299,-0.05486107,0.2546916,0.07007122,0.012088776,0.40565294,0.124235004,-1.1049812,-0.1440218,1.1049812,"down","ATG3",64422,"0000045 // autophagic vacuole assembly // inferred from sequence or structural similarity /// 0000045 // autophagic vacuole assembly // inferred from electronic annotation /// 0006464 // cellular protein modification process // inferred from direct assay /// 0006612 // protein targeting to membrane // inferred from sequence or structural similarity /// 0006810 // transport // inferred from electronic annotation /// 0006914 // autophagy // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0043653 // mitochondrial fragmentation involved in apoptotic process // inferred from sequence or structural similarity /// 0043653 // mitochondrial fragmentation involved in apoptotic process // inferred from electronic annotation","0000153 // cytoplasmic ubiquitin ligase complex // inferred from physical interaction /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0016874 // ligase activity // inferred from electronic annotation /// 0019776 // Atg8 ligase activity // inferred from sequence or structural similarity /// 0019776 // Atg8 ligase activity // inferred from electronic annotation /// 0019777 // Atg12 ligase activity // inferred from sequence or structural similarity /// 0019777 // Atg12 ligase activity // inferred from electronic annotation /// 0019787 // small conjugating protein ligase activity // inferred from direct assay /// 0019899 // enzyme binding // inferred from physical interaction","chr3:112251356-112280759 (-) // 92.24 // q13.2"]
["11723802_at",44.156803,48.192204,51.837654,33.037636,41.002357,37.84233,0.053464413,0.17962837,0.28482914,-0.36506128,-0.053464413,-0.16917038,0.20194668,0.030941036,1.2910451,0.36853936,1.2910451,"up","F10",2159,"0006508 // proteolysis // traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0007596 // blood coagulation // inferred by curator /// 0007596 // blood coagulation // traceable author statement /// 0007596 // blood coagulation // inferred from electronic annotation /// 0007597 // blood coagulation, intrinsic pathway // traceable author statement /// 0007598 // blood coagulation, extrinsic pathway // traceable author statement /// 0007599 // hemostasis // inferred from electronic annotation /// 0017187 // peptidyl-glutamic acid carboxylation // traceable author statement /// 0030335 // positive regulation of cell migration // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from direct assay","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005792 // microsome // inferred from electronic annotation /// 0005796 // Golgi lumen // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0031233 // intrinsic to external side of plasma membrane // inferred by curator","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from direct assay /// 0004252 // serine-type endopeptidase activity // traceable author statement /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from direct assay /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr13:113777123-113803843 (+) // 93.39 // q34"]
["11743245_at",21.971182,19.479284,23.114319,17.438236,16.79461,19.838161,0.16050291,-0.013168812,0.23367739,-0.17285538,-0.22711134,0.013168812,0.29960874,0.0682242,1.1941106,0.2559365,1.1941106,"up","OR52E6",390078,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:5862157-5863127 (-) // 100.0 // p15.4"]
["11745294_a_at",88.02403,87.97697,86.82575,85.88953,86.88041,88.68184,0.009819508,0.009047508,-0.009954929,-0.025596142,-0.009047985,0.020560265,0.84965587,0.63558626,1.0053273,0.007665333,1.0053273,"up","OGFOD2",79676,"0055114 // oxidation-reduction process // inferred from electronic annotation","","0005506 // iron ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from electronic annotation /// 0031418 // L-ascorbic acid binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:123459249-123464309 (+) // 91.16 // q24.31"]
["11719654_a_at",18.240683,23.015347,26.588814,21.740858,29.267038,29.268654,-0.43954802,-0.10411167,0.10411167,-0.18629885,0.24256897,0.2426486,0.63126236,0.31285155,-1.1860424,-0.24615562,1.1860424,"down","SV2A",9900,"0006810 // transport // inferred from electronic annotation /// 0006836 // neurotransmitter transport // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0008021 // synaptic vesicle // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0031594 // neuromuscular junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0048786 // presynaptic active zone // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005215 // transporter activity // inferred from electronic annotation /// 0022857 // transmembrane transporter activity // inferred from electronic annotation","chr1:149874869-149889531 (-) // 85.65 // q21.2"]
["11749549_a_at",228.9322,226.48598,203.94841,265.36884,284.25784,243.08206,-0.043261528,-0.05875969,-0.20997715,0.16981697,0.26901817,0.043261528,0.21367058,0.034769878,-1.2013848,-0.2646983,1.2013848,"down","PIGX",54965,"0006501 // C-terminal protein lipidation // traceable author statement /// 0006506 // GPI anchor biosynthetic process // inferred from electronic annotation /// 0016254 // preassembly of GPI anchor in ER membrane // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:196439470-196461160 (+) // 89.66 // q29"]
["11734337_at",28.723764,29.00378,31.794147,23.67502,24.518583,25.086868,0.09765625,0.111652374,0.24417257,-0.18122292,-0.13071299,-0.09765625,0.08725871,0.005446272,1.2206851,0.28769112,1.2206851,"up","THSD7B",80731,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr2:137748461-138435287 (+) // 99.97 // q22.1"]
["11742392_s_at",32.124973,36.012928,36.312157,30.702875,34.985714,37.600586,-0.14394522,0.0208745,0.03281212,-0.20926666,-0.0208745,0.083114624,0.9507866,0.86295503,1.0132025,0.01892261,1.0132025,"up","OR1L4 /// OR1L6","254973 /// 392390","0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr9:125486268-125487204 (+) // 100.0 // q33.2"]
["11761017_x_at",479.88937,582.1763,566.433,501.74713,527.5417,492.4991,-0.10042095,0.17833328,0.1387825,-0.036162376,0.036162376,-0.06300163,0.6784243,0.36807558,1.0667574,0.09323217,1.0667574,"up","SDHAP2",727956,"0022900 // electron transport chain // inferred from electronic annotation /// 0055114 // oxidation-reduction process // inferred from electronic annotation","","0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016627 // oxidoreductase activity, acting on the CH-CH group of donors // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation","chr3:195384927-195399552 (+) // 94.03 // q29 /// chr3:195702573-195717169 (-) // 92.6 // q29"]
["11745022_a_at",132.89618,181.9987,200.50267,130.7062,192.6052,184.59683,-0.46385336,-0.010224819,0.12946844,-0.4878254,0.071493626,0.010224342,0.97879523,0.939045,1.0143104,0.020499157,1.0143104,"up","TRMT2B",79979,"0008033 // tRNA processing // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation","","0008168 // methyltransferase activity // inferred from electronic annotation /// 0009021 // tRNA (uracil-5-)-methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chrX:100264338-100307101 (-) // 90.57 // q22.1"]
["11763577_a_at",136.70052,125.40217,151.4107,120.10926,107.00333,110.987274,0.15556335,0.031107426,0.30301237,-0.031107903,-0.19779873,-0.14506054,0.21730776,0.036039785,1.2208478,0.2878834,1.2208478,"up","SLC25A23",79085,"0006810 // transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr19:6130374-6452399 (-) // 32.0 // p13.3"]
["11758742_x_at",427.7846,450.80823,433.04074,387.73303,414.94257,434.5729,-0.00880909,0.066820145,0.00880909,-0.15063,-0.05278206,0.0139045715,0.48846602,0.18197696,1.0610131,0.08544247,1.0610131,"up","RNF40",9810,"0006511 // ubiquitin-dependent protein catabolic process // inferred from sequence or structural similarity /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0010390 // histone monoubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0033523 // histone H2B ubiquitination // inferred from direct assay","0000151 // ubiquitin ligase complex // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0019717 // synaptosome // inferred from sequence or structural similarity /// 0019717 // synaptosome // inferred from electronic annotation /// 0033503 // HULC complex // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0017075 // syntaxin-1 binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:30773628-30786539 (+) // 77.44 // p11.2"]
["11746461_a_at",428.90646,402.11105,370.24985,293.10724,341.80243,353.98386,0.24457169,0.15150261,0.03240776,-0.3046627,-0.08292866,-0.03240776,0.26339874,0.052637085,1.2165765,0.282827,1.2165765,"up","TACC3",10460,"0000226 // microtubule cytoskeleton organization // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from electronic annotation /// 0022027 // interkinetic nuclear migration // inferred from electronic annotation /// 0030097 // hemopoiesis // inferred from electronic annotation /// 0030953 // astral microtubule organization // inferred from electronic annotation /// 0032886 // regulation of microtubule-based process // inferred from electronic annotation /// 0042994 // cytoplasmic sequestering of transcription factor // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // inferred from electronic annotation","0019904 // protein domain specific binding // inferred from electronic annotation","chr4:1723218-1740443 (+) // 94.08 // p16.3"]
["11759530_s_at",18.297092,19.472937,19.51656,15.989617,16.65649,22.329535,-0.044928074,0.044928074,0.04815626,-0.23940706,-0.18045807,0.24241066,0.858139,0.6524601,1.0535097,0.07520361,1.0535097,"up","NUDT22",84304,"","","0016787 // hydrolase activity // inferred from electronic annotation","chr11:63997013-64001752 (+) // 98.79 // q13.1"]
["11752719_a_at",99.95865,109.64004,109.74822,86.52524,105.13632,117.45961,-0.10311508,0.030256748,0.03167963,-0.3113246,-0.030256748,0.12964725,0.880433,0.6979297,1.0402415,0.056918472,1.0402415,"up","DHX34",9704,"","0005622 // intracellular // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr19:47852574-47876131 (+) // 100.0 // q13.32"]
["11762060_x_at",8521.465,8643.142,8584.562,10879.493,9737.961,10044.146,-0.10648632,-0.086031914,-0.09584236,0.24595165,0.086031914,0.13069534,0.09470189,0.0064495835,-1.1894928,-0.25034657,1.1894928,"down","CD55",1604,"0006958 // complement activation, classical pathway // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from direct assay /// 0030449 // regulation of complement activation // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation /// 0045730 // respiratory burst // non-traceable author statement","0005576 // extracellular region // traceable author statement /// 0005625 // soluble fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031225 // anchored to membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay","0004872 // receptor activity // inferred from electronic annotation","chr1:207495024-207533214 (+) // 99.83 // q32.2"]
["11736013_at",848.6399,868.1576,868.1576,942.72266,943.05365,828.5449,-0.03280449,0,0,0.11887646,0.11938286,-0.06737709,0.6580089,0.34265742,-1.0481867,-0.06789565,1.0481867,"down","GLE1",2733,"0006406 // mRNA export from nucleus // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016973 // poly(A)+ mRNA export from nucleus // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005643 // nuclear pore // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","","chr9:131266490-131304571 (+) // 98.21 // q34.11"]
["11723466_a_at",530.4136,485.05762,468.76178,485.45026,461.77356,478.69144,0.13849163,0.009530067,-0.03977108,0.010697365,-0.061440468,-0.009530067,0.6890104,0.38258955,1.0397053,0.05617463,1.0397053,"up","MRPS11",64963,"0006412 // translation // inferred from electronic annotation /// 0042769 // DNA damage response, detection of DNA damage // non-traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005763 // mitochondrial small ribosomal subunit // inferred from direct assay /// 0005763 // mitochondrial small ribosomal subunit // inferred from sequence or structural similarity /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from electronic annotation","chr15:89010683-89022215 (+) // 81.6 // q25.3"]
["11736929_at",11.165601,9.362574,10.449948,9.619272,9.55769,9.532974,0.21969414,-0.034389496,0.12412906,0.00463295,-0.0046331882,-0.008368492,0.54359406,0.22653668,1.076191,0.105934076,1.076191,"up","G6PC",2538,"0005975 // carbohydrate metabolic process // traceable author statement /// 0005977 // glycogen metabolic process // traceable author statement /// 0005977 // glycogen metabolic process // inferred from electronic annotation /// 0005980 // glycogen catabolic process // inferred from electronic annotation /// 0006094 // gluconeogenesis // inferred from electronic annotation /// 0006094 // gluconeogenesis // inferred from mutant phenotype /// 0006641 // triglyceride metabolic process // inferred from electronic annotation /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0015760 // glucose-6-phosphate transport // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from mutant phenotype /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0042632 // cholesterol homeostasis // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046415 // urate metabolic process // inferred from electronic annotation /// 0051156 // glucose 6-phosphate metabolic process // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004346 // glucose-6-phosphatase activity // inferred from direct assay /// 0004346 // glucose-6-phosphatase activity // inferred from electronic annotation /// 0016773 // phosphotransferase activity, alcohol group as acceptor // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042301 // phosphate ion binding // inferred from mutant phenotype","chr17:41052814-41065386 (+) // 82.52 // q21.31"]
["11759294_s_at",424.14832,407.30716,404.48077,441.08914,407.58997,389.38922,0.057950974,-0.000500679,-0.010546684,0.11445236,0.000500679,-0.06540489,0.9954968,0.9883422,-1.0006112,-0.0008814857,1.0006112,"down","MLL",4297,"0006306 // DNA methylation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006461 // protein complex assembly // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0032411 // positive regulation of transporter activity // inferred from mutant phenotype /// 0035162 // embryonic hemopoiesis // traceable author statement /// 0035162 // embryonic hemopoiesis // inferred from electronic annotation /// 0043984 // histone H4-K16 acetylation // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0051568 // histone H3-K4 methylation // inferred from direct assay /// 0051568 // histone H3-K4 methylation // inferred from mutant phenotype /// 0051568 // histone H3-K4 methylation // inferred from electronic annotation /// 0051569 // regulation of histone H3-K4 methylation // inferred from electronic annotation /// 0080182 // histone H3-K4 trimethylation // inferred from direct assay /// 2001040 // positive regulation of cellular response to drug // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0035097 // histone methyltransferase complex // inferred from direct assay /// 0035097 // histone methyltransferase complex // inferred from electronic annotation /// 0044428 // nuclear part // inferred from electronic annotation /// 0071339 // MLL1 complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003680 // AT DNA binding // non-traceable author statement /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from direct assay /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from mutant phenotype /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0045322 // unmethylated CpG binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070577 // histone acetyl-lysine binding // inferred from direct assay","chr11:118307204-118397546 (+) // 98.0 // q23.3"]
["11761487_x_at",14.660322,18.326004,20.700687,12.848429,18.699718,15.880665,-0.21866488,0.103310585,0.27909708,-0.4089899,0.13243484,-0.10331035,0.73472726,0.44486737,1.1338288,0.18120277,1.1338288,"up","PDS5B",23047,"0007049 // cell cycle // inferred from electronic annotation /// 0007064 // mitotic sister chromatid cohesion // inferred from mutant phenotype /// 0007067 // mitosis // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008285 // negative regulation of cell proliferation // inferred from direct assay /// 0008285 // negative regulation of cell proliferation // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from direct assay /// 0051301 // cell division // inferred from electronic annotation","0000785 // chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // traceable author statement","chr13:33160686-33226715 (+) // 83.1 // q13.1"]
["11731043_s_at",140.2972,101.56616,111.89166,120.613014,99.96979,96.5338,0.3962245,-0.069841385,0.069841385,0.17812443,-0.09269714,-0.1431551,0.71967167,0.42459098,1.1105832,0.15131746,1.1105832,"up","ERLIN2",11160,"0008219 // cell death // inferred from electronic annotation /// 0030433 // ER-associated protein catabolic process // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr8:37594096-37616619 (+) // 82.54 // p11.23"]
["11757121_x_at",280.46292,306.7358,289.15042,341.38245,334.06555,368.15,-0.19075394,-0.061567307,-0.14674377,0.092824936,0.061567307,0.20172977,0.1237196,0.011504082,-1.1906332,-0.251729,1.1906332,"down","EIF4A2 /// MIR1248 /// SNORA4 /// SNORA63 /// SNORA81 /// SNORD2","100302143 /// 1974 /// 6043 /// 619567 /// 619568 /// 677847","0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006413 // translational initiation // inferred from electronic annotation /// 0006446 // regulation of translational initiation // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0016281 // eukaryotic translation initiation factor 4F complex // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0003743 // translation initiation factor activity // traceable author statement /// 0004386 // helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr3:186505087-186505222 (+) // 100.0 // q27.3"]
["11748262_a_at",51.741405,52.89194,45.240177,31.44241,30.573742,40.103065,0.28066063,0.31238937,0.08694601,-0.4379468,-0.47836542,-0.08694601,0.15046896,0.017141879,1.4753782,0.56108475,1.4753782,"up","PMS1",5378,"0006200 // ATP catabolic process // not recorded /// 0006281 // DNA repair // inferred from electronic annotation /// 0006298 // mismatch repair // not recorded /// 0006298 // mismatch repair // inferred from electronic annotation /// 0006298 // mismatch repair // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007131 // reciprocal meiotic recombination // not recorded /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0032300 // mismatch repair complex // not recorded /// 0032389 // MutLalpha complex // not recorded","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // not recorded /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0016887 // ATPase activity // not recorded /// 0030983 // mismatched DNA binding // inferred from electronic annotation /// 0032407 // MutSalpha complex binding // not recorded","chr2:190649175-190671775 (+) // 76.61 // q32.2"]
["11752522_a_at",44.82558,44.95728,43.373363,45.15613,53.517033,43.005047,-0.0021162033,0.0021162033,-0.04962921,0.00848341,0.2535596,-0.061932564,0.7305589,0.43934107,-1.0593994,-0.08324655,1.0593994,"down","ST8SIA5",29906,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006486 // protein glycosylation // inferred from electronic annotation /// 0006688 // glycosphingolipid biosynthetic process // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030173 // integral to Golgi membrane // inferred from electronic annotation","0003828 // alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity // inferred from electronic annotation /// 0008373 // sialyltransferase activity // traceable author statement /// 0008373 // sialyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr18:44259630-44336772 (-) // 97.54 // q21.1"]
["11763653_at",24.796495,23.036846,35.365982,23.279074,30.217875,31.638685,-0.14263296,-0.24882603,0.36959314,-0.23373556,0.14263296,0.20892048,0.9475245,0.85289675,-1.0328002,-0.04656118,1.0328002,"down","TMC5",79838,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr16:19429029-19431584 (-) // 49.51 // p12.3"]
["11716666_a_at",1140.7964,1055.7344,1003.6833,960.60956,912.8791,858.0159,0.21637821,0.10458374,0.031641006,-0.031641006,-0.10516739,-0.19458675,0.20946991,0.033187803,1.1712097,0.22799939,1.1712097,"up","ID3",3399,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001656 // metanephros development // inferred from electronic annotation /// 0006275 // regulation of DNA replication // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0007417 // central nervous system development // inferred from electronic annotation /// 0009611 // response to wounding // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0030855 // epithelial cell differentiation // inferred from electronic annotation /// 0030903 // notochord development // inferred from electronic annotation /// 0042476 // odontogenesis // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0045668 // negative regulation of osteoblast differentiation // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0051726 // regulation of cell cycle // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred by curator /// 0005737 // cytoplasm // inferred from electronic annotation","0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // traceable author statement /// 0008134 // transcription factor binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation","chr1:23884424-23886335 (-) // 95.96 // p36.12"]
["11761050_at",19.926086,24.57004,22.970455,24.041695,23.071096,26.134174,-0.2411542,0.06108761,-0.036033154,0.029726028,-0.029726028,0.15012503,0.62387276,0.30402124,-1.0882989,-0.122074865,1.0882989,"down","FGR",2268,"0002768 // immune response-regulating cell surface receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from electronic annotation /// 0007229 // integrin-mediated signaling pathway // inferred from mutant phenotype /// 0007229 // integrin-mediated signaling pathway // inferred from sequence or structural similarity /// 0007596 // blood coagulation // traceable author statement /// 0008360 // regulation of cell shape // inferred from electronic annotation /// 0008360 // regulation of cell shape // inferred from sequence or structural similarity /// 0009615 // response to virus // traceable author statement /// 0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from direct assay /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from sequence or structural similarity /// 0043306 // positive regulation of mast cell degranulation // inferred from electronic annotation /// 0043306 // positive regulation of mast cell degranulation // inferred from sequence or structural similarity /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from mutant phenotype /// 0045087 // innate immune response // inferred from electronic annotation /// 0045088 // regulation of innate immune response // inferred from electronic annotation /// 0045088 // regulation of innate immune response // inferred from sequence or structural similarity /// 0045859 // regulation of protein kinase activity // inferred from electronic annotation /// 0045859 // regulation of protein kinase activity // inferred from sequence or structural similarity /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0050715 // positive regulation of cytokine secretion // inferred from electronic annotation /// 0050715 // positive regulation of cytokine secretion // inferred from sequence or structural similarity /// 0050764 // regulation of phagocytosis // inferred from electronic annotation /// 0050764 // regulation of phagocytosis // inferred from sequence or structural similarity /// 0050830 // defense response to Gram-positive bacterium // inferred from electronic annotation /// 0050830 // defense response to Gram-positive bacterium // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from sequence or structural similarity /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0001784 // phosphotyrosine binding // inferred from electronic annotation /// 0001784 // phosphotyrosine binding // inferred from sequence or structural similarity /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from direct assay /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from direct assay /// 0004715 // non-membrane spanning protein tyrosine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from sequence or structural similarity /// 0034987 // immunoglobulin receptor binding // inferred from electronic annotation /// 0034987 // immunoglobulin receptor binding // inferred from sequence or structural similarity /// 0034988 // Fc-gamma receptor I complex binding // inferred from direct assay","chr1:27943391-27953105 (-) // 96.47 // p36.11"]
["11729603_a_at",4560.6616,4802.797,4728.368,4060.0554,4274.1997,4556.0273,0.00073337555,0.07536411,0.05283165,-0.1670103,-0.09285545,-0.00073337555,0.3038422,0.0702041,1.0941744,0.12984268,1.0941744,"up","MCM7",4176,"0000075 // cell cycle checkpoint // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000216 // M/G1 transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0006268 // DNA unwinding involved in replication // inferred from electronic annotation /// 0006270 // DNA-dependent DNA replication initiation // inferred from electronic annotation /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from mutant phenotype /// 0007049 // cell cycle // inferred from electronic annotation /// 0008283 // cell proliferation // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // inferred from electronic annotation /// 0042325 // regulation of phosphorylation // inferred from mutant phenotype","0000785 // chromatin // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0042555 // MCM complex // inferred from direct assay /// 0042555 // MCM complex // inferred from mutant phenotype","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003678 // DNA helicase activity // inferred from electronic annotation /// 0003697 // single-stranded DNA binding // inferred from electronic annotation /// 0004003 // ATP-dependent DNA helicase activity // inferred from direct assay /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr7:99543354-99699427 (-) // 97.65 // q22.1"]
["11745828_x_at",861.8159,850.8817,879.69116,863.51416,773.05597,758.76215,0.009210587,-0.009210587,0.038827896,0.012050629,-0.14759636,-0.17452145,0.4054948,0.124074265,1.0839502,0.11629842,1.0839502,"up","BNIP3L",665,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0008634 // negative regulation of survival gene product expression // inferred from direct assay /// 0035694 // mitochondrial protein catabolic process // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0051607 // defense response to virus // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // inferred from direct assay /// 0005635 // nuclear envelope // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005740 // mitochondrial envelope // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // inferred from mutant phenotype /// 0005741 // mitochondrial outer membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031224 // intrinsic to membrane // traceable author statement","0005515 // protein binding // inferred from physical interaction /// 0005521 // lamin binding // inferred from direct assay /// 0005521 // lamin binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay","chr8:26247877-26268564 (+) // 98.61 // p21.2"]
["11722341_s_at",116.8592,110.3277,111.75144,133.92671,110.7272,118.01527,0.032238483,-0.05073738,-0.03223896,0.22891092,-0.045523167,0.04644108,0.6472142,0.3303485,-1.0669719,-0.093522176,1.0669719,"down","PRR12",57479,"","","0003677 // DNA binding // inferred from electronic annotation","chr19:50094903-50129695 (+) // 95.55 // q13.33"]
["11749999_x_at",39.060246,37.412888,36.492897,37.945534,42.675274,38.614338,0.029167652,-0.032998085,-0.06891775,-0.012603283,0.15686703,0.012603283,0.59134305,0.27157757,-1.0544848,-0.07653836,1.0544848,"down","TMEM150B",284417,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr19:55824168-55845417 (-) // 89.86 // q13.42"]
["11747525_a_at",318.7904,338.38953,334.11636,268.26807,308.2752,305.11456,0.024194717,0.110271454,0.091937065,-0.22473812,-0.024194717,-0.0390625,0.30239934,0.06947923,1.1262025,0.17146622,1.1262025,"up","C6orf89",221477,"0042060 // wound healing // inferred from direct assay /// 0045787 // positive regulation of cell cycle // inferred from direct assay /// 0050673 // epithelial cell proliferation // inferred from direct assay","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:36853730-36892099 (+) // 87.87 // p21.2"]
["11724618_a_at",39.565445,39.768135,35.77593,43.32326,43.638115,40.471256,-0.020014286,-0.012642384,-0.16526604,0.110886574,0.1213336,0.012642384,0.30651176,0.07143452,-1.1077214,-0.14759514,1.1077214,"down","MOCS1",4337,"0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0006777 // Mo-molybdopterin cofactor biosynthetic process // inferred from direct assay /// 0006777 // Mo-molybdopterin cofactor biosynthetic process // inferred from mutant phenotype /// 0006777 // Mo-molybdopterin cofactor biosynthetic process // traceable author statement /// 0006777 // Mo-molybdopterin cofactor biosynthetic process // inferred from electronic annotation /// 0032324 // molybdopterin cofactor biosynthetic process // traceable author statement /// 0032324 // molybdopterin cofactor biosynthetic process // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement","0005634 // nucleus // non-traceable author statement /// 0005829 // cytosol // traceable author statement /// 0019008 // molybdopterin synthase complex // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from direct assay /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation","chr6:39871940-39895455 (-) // 94.39 // p21.2"]
["11757976_s_at",1015.24,1182.056,1221.0481,1168.232,1301.809,1226.7227,-0.24288845,-0.023410797,0.023410797,-0.040382385,0.11580849,0.030099869,0.60325444,0.28286248,-1.0838298,-0.11613817,1.0838298,"down","HTATSF1",27336,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0019079 // viral genome replication // traceable author statement /// 0032784 // regulation of transcription elongation, DNA-dependent // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation","chrX:135594136-135594496 (+) // 100.0 // q26.3"]
["11761995_a_at",15.144995,14.418463,14.897447,14.211591,14.273038,15.3767805,0.04734993,-0.023573875,0.023573875,-0.044423103,-0.03819871,0.069262266,0.86112803,0.6579272,1.0141257,0.02023649,1.0141257,"up","IL1RAP",3556,"0006461 // protein complex assembly // traceable author statement /// 0006954 // inflammatory response // traceable author statement /// 0006955 // immune response // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0042094 // interleukin-2 biosynthetic process // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031224 // intrinsic to membrane // inferred from electronic annotation","0004871 // signal transducer activity // traceable author statement /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// 0004908 // interleukin-1 receptor activity // inferred from electronic annotation","chr3:190231890-190374985 (+) // 94.58 // q28"]
["11762079_at",20.686148,24.32491,22.193129,19.393587,22.568949,23.203993,-0.11356115,0.12020826,-0.012113094,-0.20664644,0.012113094,0.05214691,0.8751169,0.68654025,1.0321411,0.045640193,1.0321411,"up","NIT2",56954,"0006807 // nitrogen compound metabolic process // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay","0016787 // hydrolase activity // inferred from electronic annotation /// 0016810 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds // inferred from electronic annotation /// 0050152 // omega-amidase activity // inferred from electronic annotation","chr3:100053600-100068855 (+) // 77.58 // q12.2"]
["11730789_a_at",11.598482,15.129898,14.134432,18.173038,12.803381,13.807662,-0.2684052,0.11506128,0.016872406,0.37945843,-0.12581635,-0.016872168,0.8034288,0.55195767,-1.0900648,-0.12441385,1.0900648,"down","KLHL10",317719,"0000902 // cell morphogenesis // inferred from electronic annotation /// 0007286 // spermatid development // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0009566 // fertilization // inferred from electronic annotation /// 0048808 // male genitalia morphogenesis // inferred from electronic annotation /// 0048873 // homeostasis of number of cells within a tissue // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","","chr17:39994031-40004613 (+) // 99.36 // q21.2"]
["11725428_a_at",19.81334,25.64809,19.594017,21.202307,17.874891,16.937439,0.008029461,0.38040876,-0.008029461,0.105778694,-0.14050817,-0.21822691,0.5773465,0.25775367,1.1575879,0.21112172,1.1575879,"up","ABLIM3",22885,"0007010 // cytoskeleton organization // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr5:148521045-148639999 (+) // 98.42 // q32"]
["11735558_a_at",42.31378,42.420036,44.18663,33.969414,42.29619,46.295628,-0.0018091202,0.0018091202,0.060673237,-0.3187003,-0.0024094582,0.12793922,0.8092745,0.56243026,1.0604044,0.08461459,1.0604044,"up","TBC1D28",254272,"0032313 // regulation of Rab GTPase activity // inferred from electronic annotation /// 0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from electronic annotation /// 0005097 // Rab GTPase activator activity // inferred from electronic annotation","chr17:15635560-15652509 (+) // 97.58 // p12 /// chr17:18538838-18547740 (-) // 99.95 // p11.2"]
["11752796_x_at",20.462755,20.342123,21.44499,33.996742,34.73533,20.171768,-0.033820152,-0.042350292,0.033820152,0.698576,0.72958326,-0.054482937,0.4312604,0.14069894,-1.3870394,-0.4720088,1.3870394,"down","C3orf33",285315,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0016788 // hydrolase activity, acting on ester bonds // inferred from electronic annotation","chr3:155480552-155524076 (-) // 80.35 // q25.31"]
["11735281_a_at",141.85873,143.64014,146.7982,106.31052,115.39632,119.35736,0.12458372,0.14258718,0.17396307,-0.29158688,-0.17327404,-0.12458372,0.06343933,0.0026521352,1.2688541,0.34352624,1.2688541,"up","BTRC",8945,"0000209 // protein polyubiquitination // inferred from electronic annotation /// 0000278 // mitotic cell cycle // traceable author statement /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030163 // protein catabolic process // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0031648 // protein destabilization // inferred from mutant phenotype /// 0033598 // mammary gland epithelial cell proliferation // inferred from electronic annotation /// 0042753 // positive regulation of circadian rhythm // inferred from electronic annotation /// 0043122 // regulation of I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045862 // positive regulation of proteolysis // inferred from mutant phenotype /// 0045879 // negative regulation of smoothened signaling pathway // traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051726 // regulation of cell cycle // inferred from electronic annotation /// 0060444 // branching involved in mammary gland duct morphogenesis // inferred from electronic annotation /// 0061136 // regulation of proteasomal protein catabolic process // inferred from electronic annotation /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0019005 // SCF ubiquitin ligase complex // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008013 // beta-catenin binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0045309 // protein phosphorylated amino acid binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr10:103113821-103317070 (+) // 99.4 // q24.32"]
["11717019_x_at",3531.5833,3215.7446,3141.1392,3157.544,2852.0625,2776.1714,0.16526985,0.030107498,-0.0037574768,0.0037574768,-0.1430397,-0.18194866,0.34404123,0.0893553,1.1257998,0.17095026,1.1257998,"up","ATP1A1",476,"0002026 // regulation of the force of heart contraction // inferred from electronic annotation /// 0002028 // regulation of sodium ion transport // inferred from sequence or structural similarity /// 0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0015672 // monovalent inorganic cation transport // inferred from electronic annotation /// 0031947 // negative regulation of glucocorticoid biosynthetic process // inferred from electronic annotation /// 0034220 // ion transmembrane transport // traceable author statement /// 0042493 // response to drug // inferred from electronic annotation /// 0045822 // negative regulation of heart contraction // inferred from electronic annotation /// 0045823 // positive regulation of heart contraction // inferred from electronic annotation /// 0045989 // positive regulation of striated muscle contraction // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005624 // membrane fraction // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005792 // microsome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005890 // sodium:potassium-exchanging ATPase complex // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from sequence or structural similarity /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0003869 // 4-nitrophenylphosphatase activity // inferred from electronic annotation /// 0005391 // sodium:potassium-exchanging ATPase activity // inferred from electronic annotation /// 0005391 // sodium:potassium-exchanging ATPase activity // inferred from sequence or structural similarity /// 0005391 // sodium:potassium-exchanging ATPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0015077 // monovalent inorganic cation transmembrane transporter activity // inferred from electronic annotation /// 0015662 // ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051087 // chaperone binding // inferred from sequence or structural similarity","chr1:116915835-116947394 (+) // 94.22 // p13.1"]
["11754530_a_at",747.74963,749.17755,832.6827,972.1387,955.8235,793.0964,-0.12007618,-0.117323875,0.03513527,0.25853062,0.23411274,-0.03513527,0.38040182,0.10938814,-1.1646725,-0.21992432,1.1646725,"down","CCDC14",64770,"","0005813 // centrosome // inferred from direct assay","","chr3:123632565-123680089 (-) // 97.36 // q21.1"]
["11716990_at",33.11994,34.472733,32.547367,35.38234,33.94203,32.526363,-0.017686367,0.040069103,-0.042845726,0.07764292,0.017686367,-0.04377699,0.8327103,0.60474294,-1.0167782,-0.024005048,1.0167782,"down","KIAA0317",9870,"0006464 // cellular protein modification process // inferred from electronic annotation /// 0042787 // protein ubiquitination involved in ubiquitin-dependent protein catabolic process // not recorded","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // not recorded /// 0005737 // cytoplasm // not recorded /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004842 // ubiquitin-protein ligase activity // not recorded /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation","chr14:75127958-75179816 (-) // 99.49 // q24.3"]
["11729901_a_at",164.47662,140.62868,139.51018,147.72664,111.265976,140.53723,0.22646093,0.0004696846,-0.011051178,0.071508884,-0.33740902,-0.0004696846,0.6540966,0.3380923,1.117868,0.16074978,1.117868,"up","AGFG2",3268,"0032312 // regulation of ARF GTPase activity // inferred from electronic annotation","","0008060 // ARF GTPase activator activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:100136833-100165842 (+) // 95.66 // q22.1"]
["11747918_a_at",45.5104,52.480022,43.733227,42.829563,37.971478,45.85735,0.028733253,0.23430538,-0.028733253,-0.05885601,-0.2325468,0.039690018,0.5407829,0.22404945,1.1188418,0.16200602,1.1188418,"up","UBAP2",55833,"","","","chr9:33927357-34048947 (-) // 99.7 // p13.3"]
["11726321_a_at",576.91174,553.66345,585.4226,631.80023,619.55615,541.88873,-0.01056385,-0.06990528,0.01056385,0.12055397,0.09232044,-0.100917816,0.74236673,0.4566819,-1.0429143,-0.060620572,1.0429143,"down","ERO1L",30001,"0006457 // protein folding // traceable author statement /// 0006457 // protein folding // inferred from electronic annotation /// 0006464 // cellular protein modification process // traceable author statement /// 0006467 // protein thiol-disulfide exchange // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0009266 // response to temperature stimulus // traceable author statement /// 0022900 // electron transport chain // inferred from electronic annotation /// 0030968 // endoplasmic reticulum unfolded protein response // inferred from electronic annotation /// 0050873 // brown fat cell differentiation // inferred from electronic annotation /// 0051085 // chaperone mediated protein folding requiring cofactor // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // traceable author statement /// 0005788 // endoplasmic reticulum lumen // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0016491 // oxidoreductase activity // inferred from direct assay /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016671 // oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor // inferred from electronic annotation /// 0050660 // flavin adenine dinucleotide binding // inferred from electronic annotation","chr14:53108162-53162687 (-) // 77.92 // q22.1"]
["11735288_x_at",28.50442,30.118362,26.170141,24.037651,28.157742,26.054586,0.07045889,0.14991665,-0.052804947,-0.17543077,0.052804947,-0.05918932,0.5779801,0.2582101,1.084073,0.116461836,1.084073,"up","AP4S1",11154,"0006810 // transport // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005794 // Golgi apparatus // inferred from electronic annotation /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0005215 // transporter activity // traceable author statement /// 0008565 // protein transporter activity // inferred from electronic annotation","chr14:31494675-31555007 (+) // 82.19 // q12"]
["11724868_a_at",443.0564,365.50327,381.0666,402.91272,392.20917,365.22482,0.19665718,-0.08094883,-0.0207901,0.05963421,0.0207901,-0.082048416,0.90545434,0.7501265,1.0225567,0.03218079,1.0225567,"up","IPO8",10526,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008536 // Ran GTPase binding // traceable author statement /// 0008565 // protein transporter activity // inferred from electronic annotation","chr12:30781921-30848929 (-) // 98.68 // p11.21"]
["11723518_at",55.890606,41.199432,46.720856,42.91918,44.232777,42.013077,0.35923672,-0.08074474,0.10069752,-0.021746635,0.021746635,-0.052530766,0.6457159,0.32863885,1.1048931,0.14390677,1.1048931,"up","ELAC1",55520,"0008033 // tRNA processing // inferred from electronic annotation /// 0042779 // tRNA 3'-trailer cleavage // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016891 // endoribonuclease activity, producing 5'-phosphomonoesters // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr18:48494386-48514600 (+) // 86.84 // q21.2"]
["11724076_a_at",6.6643624,6.9530125,6.1482763,7.026374,5.8763456,5.6627975,0.058142424,0.11931372,-0.058142424,0.13445592,-0.12340522,-0.17680955,0.7262643,0.4336413,1.0680833,0.095024146,1.0680833,"up","DDX3Y",8653,"","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0004386 // helicase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008026 // ATP-dependent helicase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chrY:15016018-15032390 (+) // 99.32 // q11.21"]
["11722717_a_at",121.860214,107.47502,106.371216,122.470604,92.05618,93.92105,0.18867254,0.007446766,-0.007446766,0.19588041,-0.21596813,-0.18703413,0.7168439,0.41999862,1.0957597,0.13193151,1.0957597,"up","GABPA",2551,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005730 // nucleolus // inferred from direct assay","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003713 // transcription coactivator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046982 // protein heterodimerization activity // inferred from direct assay","chr21:27107328-27144771 (+) // 98.94 // q21.3"]
["11763984_s_at",155.31657,192.90054,221.59352,131.24663,166.20876,168.82446,-0.10904837,0.20359659,0.40365553,-0.3519802,-0.011263847,0.011263847,0.52392524,0.20990951,1.2170552,0.2833946,1.2170552,"up","PLEKHA8",84725,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0046836 // glycolipid transport // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation /// 0017089 // glycolipid transporter activity // inferred from electronic annotation /// 0051861 // glycolipid binding // inferred from electronic annotation","chr7:30123830-30124266 (+) // 96.67 // p14.3"]
["11742080_a_at",174.13043,178.6971,174.99773,172.48567,174.2298,168.49835,-0.00041103363,0.036936283,0.0067563057,-0.014102936,0.00041151047,-0.047845364,0.41320795,0.12901926,1.0245138,0.034939475,1.0245138,"up","SMARCD2",6603,"0006337 // nucleosome disassembly // inferred from direct assay /// 0006338 // chromatin remodeling // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // non-traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0016514 // SWI/SNF complex // inferred from direct assay","0003713 // transcription coactivator activity // non-traceable author statement","chr17:61909440-61920351 (-) // 99.56 // q23.3"]
["11717876_a_at",138.9095,107.22289,92.17139,160.05917,116.13521,87.80543,0.31593657,-0.057596207,-0.27581787,0.52039623,0.057596684,-0.34582663,0.924228,0.7979091,-1.0593759,-0.083214566,1.0593759,"down","PPFIA1",8500,"0007160 // cell-matrix adhesion // traceable author statement /// 0007165 // signal transduction // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement","0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr11:70116814-70230607 (+) // 97.34 // q13.3"]
["11738402_a_at",66.3741,62.55761,67.556244,63.835514,58.575336,55.72252,0.07084799,-0.0145869255,0.09631729,0.0145869255,-0.10947895,-0.18151188,0.3588987,0.097479194,1.1041943,0.14299403,1.1041943,"up","WDPCP",51057,"0016476 // regulation of embryonic cell shape // inferred from sequence or structural similarity /// 0030030 // cell projection organization // inferred from electronic annotation /// 0032185 // septin cytoskeleton organization // inferred from sequence or structural similarity /// 0032880 // regulation of protein localization // inferred from sequence or structural similarity /// 0060271 // cilium morphogenesis // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0005938 // cell cortex // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from sequence or structural similarity /// 0035085 // cilium axoneme // inferred from sequence or structural similarity /// 0035085 // cilium axoneme // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","","chr2:63348536-63665141 (-) // 88.61 // p15"]
["11730785_a_at",59.02355,53.549465,52.71825,45.287754,59.110504,48.699463,0.15170336,0.011284828,-0.011284828,-0.23046637,0.15382719,-0.1256814,0.7027089,0.400357,1.0852354,0.11800796,1.0852354,"up","TTC21A",199223,"","","","chr3:39149151-39180394 (+) // 99.58 // p22.2"]
["11734621_x_at",17.023075,20.891779,16.278519,22.648464,19.231304,18.435839,-0.14549303,0.1499505,-0.2100153,0.26642847,0.030471802,-0.030471802,0.64966905,0.33328503,-1.1152203,-0.15732874,1.1152203,"down","VPS13B",157680,"0006810 // transport // inferred from electronic annotation /// 0008104 // protein localization // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","","","chr8:100025494-100133985 (+) // 87.57 // q22.2"]
["11719893_a_at",37.67864,39.255833,41.226948,39.735825,38.948837,44.910187,-0.06792688,-0.008766651,0.061913967,0.008766651,-0.020093441,0.18536901,0.73497856,0.4451088,-1.0445927,-0.062940575,1.0445927,"down","VASH1",22846,"0001525 // angiogenesis // inferred from direct assay /// 0001525 // angiogenesis // inferred from electronic annotation /// 0001937 // negative regulation of endothelial cell proliferation // inferred from direct assay /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0010596 // negative regulation of endothelial cell migration // inferred from genetic interaction /// 0016525 // negative regulation of angiogenesis // inferred from direct assay /// 0016525 // negative regulation of angiogenesis // inferred from electronic annotation /// 0043537 // negative regulation of blood vessel endothelial cell migration // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0045177 // apical part of cell // inferred from direct assay","","chr14:77228234-77249365 (+) // 91.73 // q24.3"]
["11742442_a_at",524.7964,442.70187,432.76346,571.9606,416.73782,369.85306,0.26180077,0.016378403,-0.016378403,0.38595867,-0.07081699,-0.2430048,0.9150525,0.77546364,1.044796,0.06322126,1.044796,"up","USH1C",10083,"0000086 // G2/M transition of mitotic cell cycle // inferred from mutant phenotype /// 0007605 // sensory perception of sound // inferred from mutant phenotype /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0045494 // photoreceptor cell maintenance // inferred from mutant phenotype /// 0050953 // sensory perception of light stimulus // inferred from mutant phenotype /// 0050957 // equilibrioception // inferred from mutant phenotype","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0032420 // stereocilium // traceable author statement /// 0045177 // apical part of cell // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr11:17515441-17565963 (-) // 100.0 // p15.1"]
["11726718_a_at",612.59753,541.2884,538.25726,533.34973,506.38968,487.73755,0.19325066,0.014708519,0.0066070557,-0.0066070557,-0.081440926,-0.13558388,0.3827089,0.11047603,1.106548,0.14606597,1.106548,"up","GEMIN7",79760,"0000387 // spliceosomal snRNP assembly // traceable author statement /// 0000398 // nuclear mRNA splicing, via spliceosome // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0034660 // ncRNA metabolic process // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // traceable author statement /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0015030 // Cajal body // inferred from electronic annotation /// 0016604 // nuclear body // inferred from direct assay /// 0032797 // SMN complex // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr19:45582519-45594863 (+) // 99.65 // q13.32"]
["11721980_a_at",31.594128,37.44572,43.57218,38.389084,44.783836,40.8281,-0.32547283,-0.080328465,0.13827801,-0.044433117,0.17784882,0.044433117,0.6830291,0.37462643,-1.1083837,-0.14845733,1.1083837,"down","SLC36A1",206358,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006865 // amino acid transport // traceable author statement /// 0006865 // amino acid transport // inferred from electronic annotation /// 0015804 // neutral amino acid transport // inferred from electronic annotation /// 0015808 // L-alanine transport // inferred from electronic annotation /// 0015816 // glycine transport // inferred from electronic annotation /// 0015824 // proline transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0035524 // proline transmembrane transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0015078 // hydrogen ion transmembrane transporter activity // inferred from electronic annotation /// 0015175 // neutral amino acid transmembrane transporter activity // inferred from electronic annotation /// 0015180 // L-alanine transmembrane transporter activity // inferred from electronic annotation /// 0015187 // glycine transmembrane transporter activity // inferred from electronic annotation /// 0015193 // L-proline transmembrane transporter activity // inferred from electronic annotation /// 0015293 // symporter activity // inferred from electronic annotation","chr5:150827156-150871940 (+) // 97.93 // q33.1"]
["11754989_a_at",198.52092,200.61357,200.5042,232.21599,211.80566,182.05627,-0.014734745,0.00039339066,-0.00039339066,0.21144152,0.078715324,-0.13964176,0.84059215,0.619386,-1.0389191,-0.055083305,1.0389191,"down","DMXL2",23312,"","0008021 // synaptic vesicle // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030672 // synaptic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0017137 // Rab GTPase binding // inferred from direct assay","chr15:51739974-51773676 (-) // 99.31 // q21.2"]
["11717317_at",569.72253,499.52652,491.28174,558.6139,516.5048,534.8273,0.116332054,-0.073366165,-0.09737682,0.087924,-0.02514553,0.02514553,0.808925,0.5617924,-1.0334331,-0.04744497,1.0334331,"down","AGPAT6",137964,"0002071 // glandular epithelial cell maturation // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006637 // acyl-CoA metabolic process // inferred from direct assay /// 0006641 // triglyceride metabolic process // inferred from electronic annotation /// 0006656 // phosphatidylcholine biosynthetic process // inferred from direct assay /// 0007595 // lactation // inferred from sequence or structural similarity /// 0007595 // lactation // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008610 // lipid biosynthetic process // inferred from sequence or structural similarity /// 0008610 // lipid biosynthetic process // inferred from electronic annotation /// 0008654 // phospholipid biosynthetic process // inferred from electronic annotation /// 0016024 // CDP-diacylglycerol biosynthetic process // inferred from electronic annotation /// 0019432 // triglyceride biosynthetic process // inferred from direct assay /// 0019432 // triglyceride biosynthetic process // inferred from sequence or structural similarity /// 0019432 // triglyceride biosynthetic process // traceable author statement /// 0019432 // triglyceride biosynthetic process // inferred from electronic annotation /// 0030879 // mammary gland development // inferred from electronic annotation /// 0040014 // regulation of multicellular organism growth // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046339 // diacylglycerol metabolic process // inferred from electronic annotation","0005624 // membrane fraction // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0003841 // 1-acylglycerol-3-phosphate O-acyltransferase activity // inferred from direct assay /// 0004366 // glycerol-3-phosphate O-acyltransferase activity // inferred from direct assay /// 0004366 // glycerol-3-phosphate O-acyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation","chr8:41435706-41482520 (+) // 91.33 // p11.21"]
["11730625_at",11.746885,11.768768,12.515117,12.662131,12.0923605,12.852755,-0.06660533,-0.0639205,0.024787903,0.04163623,-0.024787903,0.06319356,0.50717276,0.19679064,-1.0438588,-0.06192653,1.0438588,"down","KLB",152831,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds // inferred from electronic annotation /// 0017134 // fibroblast growth factor binding // inferred from physical interaction /// 0043169 // cation binding // inferred from electronic annotation","chr4:39408472-39453143 (+) // 89.28 // p14"]
["11757134_at",42.114178,36.53877,33.845947,44.90864,43.74628,34.249294,0.10243893,-0.10243893,-0.21288395,0.19512606,0.15729332,-0.19579268,0.7522828,0.47133744,-1.0891255,-0.12317022,1.0891255,"down","SNORA65",26783,"","","","chr9:130210780-130210916 (-) // 99.27 // q33.3"]
["11749086_x_at",17.63481,20.471611,19.547327,16.49874,18.610455,21.976265,-0.113116264,0.10208225,0.035429,-0.20918655,-0.035429,0.20440388,0.9583943,0.88161796,1.0150393,0.021535622,1.0150393,"up","CACNA1C",775,"0006112 // energy reserve metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006816 // calcium ion transport // inferred from electronic annotation /// 0006874 // cellular calcium ion homeostasis // inferred from electronic annotation /// 0006939 // smooth muscle contraction // inferred from electronic annotation /// 0007204 // elevation of cytosolic calcium ion concentration // inferred from direct assay /// 0007268 // synaptic transmission // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007628 // adult walking behavior // inferred from electronic annotation /// 0008217 // regulation of blood pressure // inferred from electronic annotation /// 0008542 // visual learning // inferred from electronic annotation /// 0017156 // calcium ion-dependent exocytosis // inferred from electronic annotation /// 0019229 // regulation of vasoconstriction // inferred from electronic annotation /// 0030073 // insulin secretion // inferred from electronic annotation /// 0030252 // growth hormone secretion // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0046620 // regulation of organ growth // inferred from electronic annotation /// 0050796 // regulation of insulin secretion // traceable author statement /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from direct assay /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0060083 // smooth muscle contraction involved in micturition // inferred from electronic annotation /// 0060402 // calcium ion transport into cytosol // traceable author statement /// 0070588 // calcium ion transmembrane transport // inferred from electronic annotation","0002095 // caveolar macromolecular signaling complex // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005891 // voltage-gated calcium channel complex // inferred from direct assay /// 0005891 // voltage-gated calcium channel complex // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from direct assay /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030018 // Z disc // inferred from sequence or structural similarity /// 0030018 // Z disc // inferred from electronic annotation /// 0030315 // T-tubule // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0042383 // sarcolemma // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0043198 // dendritic shaft // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005245 // voltage-gated calcium channel activity // inferred from direct assay /// 0005245 // voltage-gated calcium channel activity // inferred from electronic annotation /// 0005262 // calcium channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005516 // calmodulin binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0051721 // protein phosphatase 2A binding // inferred from electronic annotation","chr12:2224418-2801325 (+) // 96.86 // p13.33"]
["11744665_a_at",115.55616,127.53117,114.697495,124.74228,120.617004,142.1625,-0.08609772,0.056158066,-0.096858025,0.02425909,-0.024258614,0.21284914,0.58560646,0.2654939,-1.0816365,-0.113215804,1.0816365,"down","RAB40C",57799,"0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0019003 // GDP binding // inferred from electronic annotation","chr16:640106-678070 (+) // 95.88 // p13.3"]
["11720716_a_at",16.195429,13.589406,15.353777,16.322504,15.193965,16.833176,0.038496494,-0.21460772,-0.038496733,0.049772263,-0.05359149,0.0942173,0.6256387,0.30632803,-1.0730138,-0.1016686,1.0730138,"down","FGF13",2258,"0000165 // MAPK cascade // inferred from direct assay /// 0007165 // signal transduction // traceable author statement /// 0007267 // cell-cell signaling // traceable author statement /// 0007399 // nervous system development // traceable author statement /// 0045860 // positive regulation of protein kinase activity // inferred from genetic interaction /// 2001257 // regulation of cation channel activity // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from physical interaction","0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation /// 0008083 // growth factor activity // traceable author statement /// 0030295 // protein kinase activator activity // inferred from genetic interaction","chrX:137713733-137793959 (-) // 91.8 // q26.3"]
["11736864_a_at",50.39413,44.76939,40.93426,44.177956,40.845364,45.352104,0.180336,0.00959301,-0.11961079,-0.00959301,-0.12274742,0.02824974,0.821995,0.5849236,1.0411199,0.05813627,1.0411199,"up","KIAA1958",158405,"","","","chr9:115249247-115427580 (+) // 91.92 // q32"]
["11762384_at",22.588112,22.279175,23.94421,26.1529,21.448359,19.840181,0.0099339485,-0.0099339485,0.09404707,0.22134113,-0.06476259,-0.17720461,0.91396654,0.7712142,1.0268493,0.038224425,1.0268493,"up","GOLGA4",2803,"0000042 // protein targeting to Golgi // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // traceable author statement /// 0043001 // Golgi to plasma membrane protein transport // inferred from direct assay","0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0051020 // GTPase binding // inferred from physical interaction","chr3:37284681-37361871 (+) // 76.74 // p22.2"]
["11738539_a_at",6.000875,6.4681354,5.7690096,7.1778126,5.990811,6.4318376,-0.05002904,0.058147907,-0.10687828,0.20834231,-0.052450657,0.05002904,0.6395245,0.322151,-1.0729331,-0.10156009,1.0729331,"down","DISC1 /// TSNAX-DISC1","100303453 /// 27185","0000226 // microtubule cytoskeleton organization // inferred from mutant phenotype /// 0001764 // neuron migration // inferred from mutant phenotype /// 0002052 // positive regulation of neuroblast proliferation // inferred from genetic interaction /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0010975 // regulation of neuron projection development // inferred from electronic annotation /// 0015031 // protein transport // traceable author statement /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030177 // positive regulation of Wnt receptor signaling pathway // inferred from genetic interaction /// 0051602 // response to electrical stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005813 // centrosome // inferred from direct assay /// 0005813 // centrosome // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005871 // kinesin complex // inferred from electronic annotation /// 0005874 // microtubule // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0033267 // axon part // inferred from electronic annotation /// 0044297 // cell body // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003677 // DNA binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008565 // protein transporter activity // traceable author statement /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr1:231762560-232002433 (+) // 90.13 // q42.2"]
["11756050_x_at",11.947208,10.860493,11.858849,11.448522,11.947208,11.282893,0.036111116,-0.101472855,0.025401354,-0.025401354,0.036111116,-0.046425343,0.99245363,0.9790521,-1.0009812,-0.0014148952,1.0009812,"down","CD1E",913,"0006955 // immune response // non-traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0019882 // antigen processing and presentation // inferred from electronic annotation","0000139 // Golgi membrane // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043202 // lysosomal lumen // inferred from electronic annotation","","chr1:158323778-158326686 (+) // 100.0 // q23.1"]
["11723692_a_at",8.509776,8.061458,7.708009,8.531266,8.220146,8.390954,0.03512168,-0.042958736,-0.10764122,0.038760424,-0.014835596,0.014835358,0.6273232,0.30834243,-1.0362792,-0.051412754,1.0362792,"down","CD302 /// LY75-CD302","100526664 /// 9936","0006897 // endocytosis // inferred from electronic annotation /// 0006909 // phagocytosis // inferred from direct assay /// 0006954 // inflammatory response // traceable author statement /// 0006955 // immune response // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0005902 // microvillus // inferred from electronic annotation /// 0005938 // cell cortex // inferred from direct assay /// 0005938 // cell cortex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030175 // filopodium // inferred from direct assay /// 0030175 // filopodium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr2:160624982-160639981 (-) // 79.5 // q24.2"]
["11728253_a_at",16.2796,18.381662,14.77406,15.840423,17.566172,17.696814,-0.054867268,0.120334625,-0.19486618,-0.09432173,0.054867268,0.065557,0.8553208,0.6467247,-1.0365816,-0.051833738,1.0365816,"down","NMNAT2",23057,"0006766 // vitamin metabolic process // traceable author statement /// 0006767 // water-soluble vitamin metabolic process // traceable author statement /// 0009058 // biosynthetic process // inferred from electronic annotation /// 0009435 // NAD biosynthetic process // inferred by curator /// 0009435 // NAD biosynthetic process // inferred from electronic annotation /// 0019363 // pyridine nucleotide biosynthetic process // inferred from electronic annotation /// 0019674 // NAD metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005770 // late endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0000309 // nicotinamide-nucleotide adenylyltransferase activity // traceable author statement /// 0000309 // nicotinamide-nucleotide adenylyltransferase activity // inferred from electronic annotation /// 0004515 // nicotinate-nucleotide adenylyltransferase activity // inferred from direct assay /// 0004515 // nicotinate-nucleotide adenylyltransferase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016779 // nucleotidyltransferase activity // inferred from electronic annotation","chr1:183217109-183387988 (-) // 92.77 // q25.3"]
["11741417_x_at",835.0628,740.719,755.51544,790.736,759.7283,747.46,0.14041233,-0.032546043,-0.004011154,0.06172371,0.004011154,-0.019475937,0.9094823,0.76009303,1.0133965,0.019198753,1.0133965,"up","EIF4E",1977,"0000082 // G1/S transition of mitotic cell cycle // inferred from mutant phenotype /// 0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening // traceable author statement /// 0006406 // mRNA export from nucleus // traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from sequence or structural similarity /// 0006413 // translational initiation // traceable author statement /// 0006413 // translational initiation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045931 // positive regulation of mitotic cell cycle // inferred from mutant phenotype","0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005845 // mRNA cap binding complex // inferred from direct assay /// 0005845 // mRNA cap binding complex // inferred from electronic annotation /// 0016281 // eukaryotic translation initiation factor 4F complex // traceable author statement /// 0016442 // RNA-induced silencing complex // inferred from direct assay","0000339 // RNA cap binding // traceable author statement /// 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from sequence or structural similarity /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0003743 // translation initiation factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr4:99799606-99850243 (-) // 95.42 // q23"]
["11753310_x_at",364.68826,371.0888,375.0987,346.55606,364.3868,371.13248,-0.012550354,0.012550354,0.028056145,-0.086125374,-0.013743401,0.012720108,0.61411375,0.29402864,1.0269754,0.038401615,1.0269754,"up","NARF",26502,"","0005634 // nucleus // inferred from electronic annotation /// 0005638 // lamin filament // inferred from direct assay /// 0005652 // nuclear lamina // traceable author statement /// 0031981 // nuclear lumen // inferred from direct assay","0005521 // lamin binding // inferred from physical interaction","chr17:80416539-80441692 (+) // 86.38 // q25.3"]
["11722843_a_at",181.58322,160.55634,157.39943,155.7939,142.39919,137.88965,0.21359634,0.036045074,0.007396221,-0.0073957443,-0.13709354,-0.18352032,0.32332414,0.079248615,1.1447366,0.19501573,1.1447366,"up","ENAH",55740,"0001843 // neural tube closure // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007411 // axon guidance // inferred from electronic annotation /// 0008154 // actin polymerization or depolymerization // inferred from electronic annotation /// 0030036 // actin cytoskeleton organization // inferred from electronic annotation /// 0046907 // intracellular transport // inferred from electronic annotation /// 0050852 // T cell receptor signaling pathway // traceable author statement","0001725 // stress fiber // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay /// 0005925 // focal adhesion // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from direct assay /// 0030054 // cell junction // inferred from electronic annotation /// 0030175 // filopodium // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0017124 // SH3 domain binding // inferred from electronic annotation /// 0050699 // WW domain binding // inferred from physical interaction","chr1:225674530-225840816 (-) // 85.53 // q42.12"]
["11720884_a_at",672.7993,731.7743,734.99774,686.17554,701.38904,657.4385,-0.04421997,0.077002525,0.083343506,-0.015818596,0.015818596,-0.0775404,0.5838822,0.26412115,1.0457627,0.06455546,1.0457627,"up","HMBS",3145,"0001666 // response to hypoxia // inferred from electronic annotation /// 0006778 // porphyrin-containing compound metabolic process // traceable author statement /// 0006779 // porphyrin-containing compound biosynthetic process // inferred from electronic annotation /// 0006782 // protoporphyrinogen IX biosynthetic process // inferred from electronic annotation /// 0006783 // heme biosynthetic process // inferred by curator /// 0006783 // heme biosynthetic process // traceable author statement /// 0006783 // heme biosynthetic process // inferred from electronic annotation /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0009743 // response to carbohydrate stimulus // inferred from electronic annotation /// 0010038 // response to metal ion // inferred from electronic annotation /// 0010043 // response to zinc ion // inferred from electronic annotation /// 0010288 // response to lead ion // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0018160 // peptidyl-pyrromethane cofactor linkage // inferred from electronic annotation /// 0031100 // organ regeneration // inferred from electronic annotation /// 0031667 // response to nutrient levels // inferred from electronic annotation /// 0032025 // response to cobalt ion // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0033014 // tetrapyrrole biosynthetic process // inferred from electronic annotation /// 0033273 // response to vitamin // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043200 // response to amino acid stimulus // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0048708 // astrocyte differentiation // inferred from electronic annotation /// 0051597 // response to methylmercury // inferred from electronic annotation /// 0071236 // cellular response to antibiotic // inferred from electronic annotation /// 0071243 // cellular response to arsenic-containing substance // inferred from electronic annotation /// 0071284 // cellular response to lead ion // inferred from electronic annotation /// 0071345 // cellular response to cytokine stimulus // inferred from electronic annotation /// 0071418 // cellular response to amine stimulus // inferred from electronic annotation /// 0071549 // cellular response to dexamethasone stimulus // inferred from electronic annotation","0000793 // condensed chromosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0030424 // axon // inferred from electronic annotation","0004418 // hydroxymethylbilane synthase activity // inferred from direct assay /// 0004418 // hydroxymethylbilane synthase activity // inferred from electronic annotation /// 0004418 // hydroxymethylbilane synthase activity // traceable author statement /// 0004852 // uroporphyrinogen-III synthase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0031406 // carboxylic acid binding // inferred from electronic annotation /// 0043176 // amine binding // inferred from electronic annotation /// 0050662 // coenzyme binding // inferred from electronic annotation","chr11:118958696-118964259 (+) // 98.26 // q23.3"]
["11719763_a_at",435.1228,437.13858,528.64935,581.3929,556.7206,498.82004,-0.23899269,-0.2323246,0.041895866,0.17909813,0.11653805,-0.041895866,0.39087048,0.1153422,-1.1709833,-0.22772051,1.1709833,"down","VPS13C",54832,"0008104 // protein localization // inferred from electronic annotation","","","chr15:62144597-62352647 (-) // 97.01 // q22.2"]
["11723921_at",16.605831,10.966352,12.543747,13.667493,12.0663185,13.20746,0.36752892,-0.2310772,-0.037192583,0.08658767,-0.09317541,0.037192345,0.96687657,0.9071747,1.0159891,0.022884874,1.0159891,"up","BBS5 /// KBTBD10","10324 /// 129880","0001947 // heart looping // inferred from sequence or structural similarity /// 0006941 // striated muscle contraction // traceable author statement /// 0007601 // visual perception // inferred from electronic annotation /// 0009296 // flagellum assembly // inferred from sequence or structural similarity /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0031275 // regulation of lateral pseudopodium assembly // inferred from electronic annotation /// 0032402 // melanosome transport // inferred from sequence or structural similarity /// 0042384 // cilium assembly // inferred from mutant phenotype /// 0050896 // response to stimulus // inferred from electronic annotation","0001726 // ruffle // inferred from electronic annotation /// 0005622 // intracellular // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from sequence or structural similarity /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0031143 // pseudopodium // inferred from electronic annotation /// 0034464 // BBSome // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0060170 // cilium membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0032266 // phosphatidylinositol-3-phosphate binding // inferred from direct assay","chr2:170366045-170382768 (+) // 98.61 // q31.1"]
["11719179_a_at",189.74484,159.69124,171.57115,191.61111,186.08376,175.15727,0.071759224,-0.17701626,-0.073494434,0.0858798,0.043650627,-0.043650627,0.65633875,0.3405733,-1.0630507,-0.08821047,1.0630507,"down","PVR",5817,"0002860 // positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target // inferred from mutant phenotype /// 0007155 // cell adhesion // inferred from electronic annotation /// 0034329 // cell junction assembly // traceable author statement /// 0034332 // adherens junction organization // traceable author statement /// 0042271 // susceptibility to natural killer cell mediated cytotoxicity // inferred from mutant phenotype /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045216 // cell-cell junction organization // traceable author statement /// 0045954 // positive regulation of natural killer cell mediated cytotoxicity // inferred from mutant phenotype /// 0050776 // regulation of immune response // traceable author statement /// 0060370 // susceptibility to T cell mediated cytotoxicity // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0030054 // cell junction // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0004872 // receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0050839 // cell adhesion molecule binding // inferred from physical interaction","chr19:45147097-45169429 (+) // 53.67 // q13.31"]
["11763627_a_at",1613.7393,1593.5127,1517.0338,1500.8799,1475.0542,1607.9764,0.05367565,0.035478592,-0.035478592,-0.050923347,-0.075963974,0.048514366,0.7023087,0.39965978,1.0309799,0.044016168,1.0309799,"up","MRPL12 /// SLC25A10","1468 /// 6182","0000096 // sulfur amino acid metabolic process // traceable author statement /// 0000098 // sulfur amino acid catabolic process // traceable author statement /// 0005975 // carbohydrate metabolic process // traceable author statement /// 0006006 // glucose metabolic process // traceable author statement /// 0006094 // gluconeogenesis // traceable author statement /// 0006390 // transcription from mitochondrial promoter // inferred from direct assay /// 0006412 // translation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // traceable author statement /// 0006817 // phosphate ion transport // inferred from electronic annotation /// 0006835 // dicarboxylic acid transport // traceable author statement /// 0006839 // mitochondrial transport // inferred from electronic annotation /// 0008272 // sulfate transport // inferred from electronic annotation /// 0015709 // thiosulfate transport // inferred from electronic annotation /// 0015743 // malate transport // inferred from electronic annotation /// 0015744 // succinate transport // inferred from electronic annotation /// 0034641 // cellular nitrogen compound metabolic process // traceable author statement /// 0035435 // phosphate ion transmembrane transport // inferred from electronic annotation /// 0044281 // small molecule metabolic process // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0055085 // transmembrane transport // traceable author statement /// 0070221 // sulfide oxidation, using sulfide:quinone oxidoreductase // traceable author statement /// 0071422 // succinate transmembrane transport // inferred from electronic annotation /// 0071423 // malate transmembrane transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005762 // mitochondrial large ribosomal subunit // inferred from direct assay /// 0005762 // mitochondrial large ribosomal subunit // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0031966 // mitochondrial membrane // inferred from electronic annotation","0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // traceable author statement /// 0005310 // dicarboxylic acid transmembrane transporter activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0015114 // phosphate ion transmembrane transporter activity // inferred from electronic annotation /// 0015116 // sulfate transmembrane transporter activity // inferred from electronic annotation /// 0015117 // thiosulfate transmembrane transporter activity // inferred from electronic annotation /// 0015140 // malate transmembrane transporter activity // inferred from electronic annotation /// 0015141 // succinate transmembrane transporter activity // inferred from electronic annotation /// 0015291 // secondary active transmembrane transporter activity // inferred from electronic annotation /// 0015297 // antiporter activity // inferred from electronic annotation","chr17:79670529-79671450 (+) // 100.0 // q25.3"]
["11749748_x_at",785.65497,808.7231,818.63275,786.056,763.43054,742.07117,-0.0003681183,0.041381836,0.05895233,0.0003681183,-0.04176712,-0.08270645,0.29546684,0.06597234,1.053135,0.07469044,1.053135,"up","SNW1",22938,"0000398 // nuclear mRNA splicing, via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred from direct assay /// 0000398 // nuclear mRNA splicing, via spliceosome // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0007219 // Notch signaling pathway // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0048384 // retinoic acid receptor signaling pathway // inferred from direct assay /// 0050769 // positive regulation of neurogenesis // inferred from sequence or structural similarity /// 0071300 // cellular response to retinoic acid // inferred from direct assay","0000785 // chromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005681 // spliceosomal complex // inferred from direct assay /// 0005681 // spliceosomal complex // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0044428 // nuclear part // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferred from direct assay","0005112 // Notch binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0035257 // nuclear hormone receptor binding // inferred from direct assay","chr14:78184003-78227483 (-) // 99.54 // q24.3"]
["11760379_s_at",50.804737,53.951836,57.723488,76.32139,67.87975,67.591805,-0.2980404,-0.21133137,-0.11384487,0.28908396,0.11997795,0.11384487,0.10573452,0.0081571685,-1.3031843,-0.3820411,1.3031843,"down","GTPBP6",8225,"","","0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0005525 // GTP binding // traceable author statement","chrX:228554-230887 (-) // 57.35 // p22.33 /// chrY:178554-180887 (-) // 57.35 // p11.32"]
["11748238_a_at",102.532524,131.22295,116.34836,96.220924,88.33007,102.7288,-0.0013799667,0.35455894,0.18098974,-0.09303808,-0.21648455,0.0013794899,0.3256718,0.08037787,1.2148436,0.28077063,1.2148436,"up","TBCD",6904,"0006457 // protein folding // inferred from direct assay /// 0006457 // protein folding // traceable author statement /// 0007023 // post-chaperonin tubulin folding pathway // inferred from direct assay /// 0010812 // negative regulation of cell-substrate adhesion // inferred from sequence or structural similarity /// 0031115 // negative regulation of microtubule polymerization // inferred from direct assay /// 0034333 // adherens junction assembly // inferred from sequence or structural similarity /// 0043547 // positive regulation of GTPase activity // inferred from direct assay /// 0043547 // positive regulation of GTPase activity // inferred from mutant phenotype /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0044267 // cellular protein metabolic process // traceable author statement /// 0051084 // 'de novo' posttranslational protein folding // traceable author statement /// 0070830 // tight junction assembly // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0005874 // microtubule // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005912 // adherens junction // inferred from sequence or structural similarity /// 0005912 // adherens junction // inferred from electronic annotation /// 0005923 // tight junction // inferred from sequence or structural similarity /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016328 // lateral plasma membrane // inferred from sequence or structural similarity /// 0016328 // lateral plasma membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0005096 // GTPase activator activity // inferred from direct assay /// 0005096 // GTPase activator activity // inferred from mutant phenotype /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0048487 // beta-tubulin binding // inferred from direct assay /// 0051087 // chaperone binding // traceable author statement","chr17:80709954-80887376 (+) // 98.65 // q25.3"]
["11726012_a_at",100.32973,115.95076,114.11555,90.81036,100.158035,95.34061,0.0012354851,0.20999908,0.18698263,-0.14258432,-0.0012354851,-0.072350025,0.27602398,0.057774294,1.1525232,0.20479573,1.1525232,"up","AJUBA",84962,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001666 // response to hypoxia // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0016339 // calcium-dependent cell-cell adhesion // inferred from electronic annotation /// 0030032 // lamellipodium assembly // inferred from electronic annotation /// 0030334 // regulation of cell migration // inferred from electronic annotation /// 0031047 // gene silencing by RNA // inferred from electronic annotation /// 0031328 // positive regulation of cellular biosynthetic process // inferred from electronic annotation /// 0031334 // positive regulation of protein complex assembly // inferred from direct assay /// 0033673 // negative regulation of kinase activity // inferred from electronic annotation /// 0033674 // positive regulation of kinase activity // inferred from electronic annotation /// 0034613 // cellular protein localization // inferred from electronic annotation /// 0035195 // gene silencing by miRNA // inferred from mutant phenotype /// 0035313 // wound healing, spreading of epidermal cells // inferred from electronic annotation /// 0035331 // negative regulation of hippo signaling cascade // inferred from direct assay /// 0043087 // regulation of GTPase activity // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from electronic annotation /// 0043406 // positive regulation of MAP kinase activity // inferred from electronic annotation /// 0046474 // glycerophospholipid biosynthetic process // inferred from electronic annotation /// 0048041 // focal adhesion assembly // inferred from electronic annotation /// 1900037 // regulation of cellular response to hypoxia // inferred from direct assay /// 2000637 // positive regulation of gene silencing by miRNA // inferred from mutant phenotype","0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0005911 // cell-cell junction // inferred from electronic annotation /// 0005925 // focal adhesion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","0003682 // chromatin binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0045294 // alpha-catenin binding // inferred from direct assay /// 0045294 // alpha-catenin binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051015 // actin filament binding // inferred from electronic annotation","chr14:23440385-23451848 (-) // 94.87 // q11.2"]
["11751864_x_at",20.582375,23.574238,21.760225,21.158617,23.625961,24.391554,-0.13804293,0.057758808,-0.057758808,-0.098207,0.060920715,0.1069293,0.7427605,0.45720756,-1.0491556,-0.06922865,1.0491556,"down","PLAG1",5324,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0022612 // gland morphogenesis // inferred from electronic annotation /// 0035264 // multicellular organism growth // inferred from electronic annotation /// 0035265 // organ growth // inferred from electronic annotation /// 0060252 // positive regulation of glial cell proliferation // inferred from electronic annotation /// 0060736 // prostate gland growth // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:57080871-57092074 (-) // 58.7 // q12.1"]
["11729827_at",8.343287,9.808864,9.679531,8.532835,10.071564,10.714433,-0.22389555,0.009574413,-0.009574175,-0.1914866,0.04770422,0.13697171,0.8246158,0.5889588,-1.0514364,-0.07236162,1.0514364,"down","FAM110B",90362,"","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","","chr8:58907112-59062280 (+) // 97.12 // q12.1"]
["11721772_at",109.117424,93.22287,94.60169,113.18937,84.22103,82.245346,0.21653461,-0.01059103,0.01059103,0.26939106,-0.15709496,-0.1913414,0.8204114,0.58247966,1.0706794,0.09852658,1.0706794,"up","INO80D",54891,"0006281 // DNA repair // inferred from electronic annotation /// 0006310 // DNA recombination // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr2:206858444-206950906 (-) // 97.55 // q33.3"]
["11727101_at",196.28764,152.86542,151.1016,146.72287,112.16726,116.45528,0.39866304,0.037955284,0.021212578,-0.021213055,-0.4086547,-0.35453033,0.31386238,0.074571274,1.3324453,0.41407627,1.3324453,"up","IGF2BP1",10642,"0006403 // RNA localization // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0010610 // regulation of mRNA stability involved in response to stress // inferred from mutant phenotype /// 0017148 // negative regulation of translation // inferred from direct assay /// 0042035 // regulation of cytokine biosynthetic process // inferred by curator /// 0070934 // CRD-mediated mRNA stabilization // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0010494 // cytoplasmic stress granule // inferred from direct assay /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from direct assay /// 0042995 // cell projection // inferred from electronic annotation /// 0043197 // dendritic spine // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay /// 0070937 // CRD-mediated mRNA stability complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from direct assay /// 0003730 // mRNA 3'-UTR binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0045182 // translation regulator activity // inferred from direct assay /// 0048027 // mRNA 5'-UTR binding // inferred from direct assay","chr17:47074773-47133505 (+) // 98.95 // q21.32"]
["11756823_x_at",208.2211,203.4383,236.07094,190.4131,190.72293,182.02223,0.08008146,0.046556473,0.26118565,-0.048902035,-0.04655695,-0.11392021,0.24878435,0.04711264,1.1479563,0.19906767,1.1479563,"up","CENPL",91687,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","","chr1:173768719-173793158 (-) // 82.73 // q25.1"]
["11718671_a_at",916.98267,913.52686,875.7226,720.26495,697.271,719.8889,0.20739365,0.20194626,0.14097309,-0.14097309,-0.18778133,-0.1417265,0.023084551,0.0002065669,1.2659888,0.34026468,1.2659888,"up","C11orf49",79096,"","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay","","chr11:46958117-47183798 (+) // 93.04 // p11.2"]
["11758899_at",13.352429,12.155212,12.346494,13.252541,12.346236,13.467285,0.061917305,-0.07360983,-0.051083565,0.051083803,-0.051113844,0.07427406,0.74951726,0.467388,-1.0321648,-0.04567335,1.0321648,"down","","","","","","chr20:2844840-3021815 (+) // 93.6 // p13"]
["11762769_x_at",6.630228,9.022293,8.90091,7.3912945,7.2750683,7.2554164,-0.14533544,0.29910016,0.27955914,0.011432886,-0.011433125,-0.01533556,0.67239785,0.3613347,1.1092259,0.14955316,1.1092259,"up","ZNF215",7762,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0008270 // zinc ion binding // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:6953416-6977013 (+) // 62.35 // p15.4"]
["11747654_a_at",7.108734,7.0844836,5.9377556,7.122683,6.874968,6.9363723,0.020170689,0.015240669,-0.23950434,0.02299881,-0.02806902,-0.015240669,0.7844666,0.52067053,-1.0433772,-0.06126076,1.0433772,"down","SGK2",10110,"0001558 // regulation of cell growth // traceable author statement /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006979 // response to oxidative stress // traceable author statement /// 0007243 // intracellular protein kinase cascade // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032411 // positive regulation of transporter activity // traceable author statement /// 0042127 // regulation of cell proliferation // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0015459 // potassium channel regulator activity // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017080 // sodium channel regulator activity // non-traceable author statement /// 0017080 // sodium channel regulator activity // traceable author statement","chr20:42193425-42214266 (+) // 76.71 // q13.12"]
["11720808_a_at",606.38293,588.7695,577.8171,600.85266,607.76337,579.5499,0.027872086,-0.01465416,-0.041744232,0.01465416,0.031152725,-0.037424088,0.8780689,0.69262475,-1.0085642,-0.01230297,1.0085642,"down","RABEPK",10244,"0006898 // receptor-mediated endocytosis // traceable author statement /// 0006904 // vesicle docking involved in exocytosis // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // traceable author statement /// 0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","","chr9:127962861-127996437 (+) // 92.46 // q33.3"]
["11736355_at",92.16447,104.569046,103.560585,113.85627,100.88951,86.72296,-0.14934301,0.03283024,0.018849373,0.15558767,-0.018849373,-0.23714018,0.99784994,0.99464303,1.0006329,0.0009127671,1.0006329,"up","MDN1",23195,"0006200 // ATP catabolic process // non-traceable author statement /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006461 // protein complex assembly // non-traceable author statement /// 0006461 // protein complex assembly // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016887 // ATPase activity // non-traceable author statement /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0051082 // unfolded protein binding // non-traceable author statement","chr6:90352217-90529513 (-) // 99.47 // q15"]
["11763904_x_at",6.7022104,6.2760034,8.093444,7.5654716,6.836793,6.2813134,-0.014341593,-0.10913229,0.25777555,0.16045165,0.014341354,-0.10791206,0.95608604,0.8754711,1.0156995,0.022473644,1.0156995,"up","SNORA50",677830,"","","","chr16:58593542-58593835 (-) // 97.67 // q21"]
["11749430_a_at",485.5308,513.6098,475.97342,498.32602,468.496,536.5018,-0.018763542,0.06234646,-0.047445297,0.018763542,-0.07028961,0.12525654,0.8873365,0.71263367,-1.0180894,-0.025864271,1.0180894,"down","LOC100506538 /// NDUFAF6","100506538 /// 137682","0009058 // biosynthetic process // inferred from electronic annotation /// 0032981 // mitochondrial respiratory chain complex I assembly // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0016740 // transferase activity // inferred from electronic annotation","chr8:96037260-96089041 (+) // 80.14 // q22.1"]
["11730322_a_at",11.58115,10.476069,11.591049,9.8788,13.217554,11.3998165,0.011383772,-0.1332972,0.012616634,-0.21798706,0.2020607,-0.011383772,0.94416654,0.8444468,-1.0191236,-0.027328968,1.0191236,"down","CLEC2D",29121,"0007166 // cell surface receptor signaling pathway // traceable author statement","0005624 // membrane fraction // traceable author statement /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr12:9822307-9852039 (+) // 41.01 // p13.31"]
["11751495_x_at",429.17532,447.45956,440.04828,494.9541,496.20978,432.49405,-0.048142433,0.012047768,-0.012047768,0.15758514,0.16124058,-0.037029266,0.48558497,0.18001887,-1.079213,-0.10997966,1.079213,"down","YAF2",10138,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay","0003713 // transcription coactivator activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:42553703-42632089 (-) // 91.52 // q12"]
["11724111_x_at",146.62921,128.995,136.24634,110.99784,146.81407,154.9855,0.052977562,-0.1318798,-0.052977562,-0.34866333,0.05479479,0.13293839,0.98448956,0.95422745,1.0067346,0.009683417,1.0067346,"up","ARHGAP4",393,"0006915 // apoptotic process // traceable author statement /// 0007010 // cytoskeleton organization // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007266 // Rho protein signal transduction // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0032321 // positive regulation of Rho GTPase activity // traceable author statement /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005925 // focal adhesion // inferred from direct assay","0005070 // SH3/SH2 adaptor activity // traceable author statement /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005100 // Rho GTPase activator activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chrX:153172831-153191697 (-) // 97.06 // q28"]
["11759434_at",11.497811,15.253759,14.290751,13.240313,12.440706,12.527867,-0.1636796,0.24412584,0.15004277,0.039898157,-0.049970627,-0.039898157,0.77234083,0.5009688,1.0669456,0.093486555,1.0669456,"up","IL12RB1",3594,"0001916 // positive regulation of T cell mediated cytotoxicity // inferred from sequence or structural similarity /// 0002230 // positive regulation of defense response to virus by host // inferred from direct assay /// 0002230 // positive regulation of defense response to virus by host // inferred from sequence or structural similarity /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from direct assay /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from sequence or structural similarity /// 0007165 // signal transduction // inferred by curator /// 0018108 // peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0032729 // positive regulation of interferon-gamma production // inferred from direct assay /// 0032729 // positive regulation of interferon-gamma production // inferred from mutant phenotype /// 0035722 // interleukin-12-mediated signaling pathway // inferred from direct assay /// 0038155 // interleukin-23-mediated signaling pathway // inferred from direct assay /// 0042104 // positive regulation of activated T cell proliferation // inferred from direct assay /// 0043382 // positive regulation of memory T cell differentiation // inferred from sequence or structural similarity /// 0071346 // cellular response to interferon-gamma // inferred from direct assay /// 2000318 // positive regulation of T-helper 17 type immune response // inferred from sequence or structural similarity /// 2000330 // positive regulation of T-helper 17 cell lineage commitment // inferred from sequence or structural similarity","0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0042022 // interleukin-12 receptor complex // inferred from direct assay /// 0072536 // interleukin-23 receptor complex // inferred from direct assay","0004872 // receptor activity // inferred from electronic annotation /// 0004896 // cytokine receptor activity // traceable author statement /// 0004896 // cytokine receptor activity // inferred from electronic annotation /// 0005143 // interleukin-12 receptor binding // inferred from physical interaction /// 0016517 // interleukin-12 receptor activity // inferred from direct assay /// 0019955 // cytokine binding // inferred from electronic annotation /// 0042019 // interleukin-23 binding // inferred from physical interaction /// 0042020 // interleukin-23 receptor activity // inferred from direct assay","chr19:18169804-18197743 (-) // 88.14 // p13.11"]
["11762372_at",49.592876,52.554195,50.59196,63.31252,59.492275,57.44362,-0.14784336,-0.06417036,-0.119068146,0.2045145,0.11472607,0.06417084,0.102290176,0.0075935405,-1.179491,-0.23816445,1.179491,"down","GSN-AS1",57000,"","","","chr9:124043045-124047808 (-) // 61.07 // q33.2"]
["11754484_a_at",147.8701,126.88948,125.750725,178.40839,157.5799,150.47539,-0.012598991,-0.23335648,-0.24636221,0.25825453,0.07915449,0.012598991,0.27236712,0.05633166,-1.2148474,-0.28077516,1.2148474,"down","COPS7B",64708,"0010388 // cullin deneddylation // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0008180 // signalosome // inferred from direct assay /// 0008180 // signalosome // inferred from electronic annotation","","chr2:232654109-232673433 (+) // 79.55 // q37.1"]
["11730661_a_at",47.95707,42.423218,38.472424,44.041817,41.581837,47.226944,0.14987946,-0.027009964,-0.16803932,0.027009964,-0.055910587,0.1277461,0.86941344,0.67467326,-1.0338343,-0.048005026,1.0338343,"down","CCDC78",124093,"","","","chr16:772581-776473 (-) // 94.16 // p13.3"]
["11739735_a_at",9.275575,12.300056,15.513042,10.566714,13.204944,16.749723,-0.45836282,-0.05120659,0.28361034,-0.2703445,0.05120659,0.3942659,0.8649177,0.6664455,-1.0971005,-0.13369568,1.0971005,"down","PCDH19",57526,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chrX:99546642-99665271 (-) // 98.49 // q22.1"]
["11753149_a_at",67.94624,64.852646,76.40432,58.07484,58.259884,60.383774,0.11873007,0.051502228,0.28799057,-0.10774946,-0.10316038,-0.051502228,0.19766785,0.029726932,1.1811659,0.24021165,1.1811659,"up","CELF2",10659,"0006376 // mRNA splice site selection // inferred from electronic annotation /// 0006396 // RNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0008016 // regulation of heart contraction // traceable author statement","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003723 // RNA binding // traceable author statement","chr10:11206928-11330511 (+) // 99.74 // p14"]
["11754751_x_at",1624.7804,1528.1758,1473.9888,1996.8094,1947.0297,1835.6671,-0.08802986,-0.17646408,-0.228549,0.20942211,0.17300034,0.08802986,0.0770008,0.004160766,-1.2493391,-0.3211651,1.2493391,"down","BAG1",573,"0006915 // apoptotic process // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006916 // anti-apoptosis // traceable author statement /// 0006950 // response to stress // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0010226 // response to lithium ion // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0035094 // response to nicotine // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0070389 // chaperone cofactor-dependent protein refolding // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005057 // receptor signaling protein activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0051087 // chaperone binding // inferred from electronic annotation /// 0051219 // phosphoprotein binding // inferred from electronic annotation","chr9:33255022-33260439 (-) // 65.88 // p13.3"]
["11762966_x_at",100.42724,110.470406,119.746376,114.026566,125.04163,128.55585,-0.21852493,-0.08101606,0.035305977,-0.035305977,0.097732544,0.13771915,0.46007237,0.16090192,-1.1132623,-0.15479355,1.1132623,"down","OBP2B",29989,"0006810 // transport // inferred from electronic annotation /// 0007606 // sensory perception of chemical stimulus // traceable author statement /// 0007608 // sensory perception of smell // non-traceable author statement /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0007635 // chemosensory behavior // traceable author statement /// 0050896 // response to stimulus // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation","0005549 // odorant binding // non-traceable author statement","chr9:138438000-138441792 (+) // 96.83 // q34.3 /// chr9:136080688-136084612 (-) // 99.78 // q34.2"]
["11748353_a_at",97.43377,86.09972,80.812035,88.16682,85.13434,91.79319,0.16130018,-0.017113209,-0.1085515,0.017113686,-0.033380985,0.07526493,0.9759918,0.9315902,-1.0054123,-0.007787301,1.0054123,"down","TMCC2",9911,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr1:205198058-205241431 (+) // 96.88 // q32.1"]
["11727093_s_at",2062.897,2014.0563,2131.0747,1960.3899,2030.3806,1821.9545,0.028744698,-0.0058231354,0.07565403,-0.044786453,0.0058231354,-0.15044022,0.42587847,0.13711399,1.0688008,0.095993,1.0688008,"up","UBE2V2",7336,"0000209 // protein polyubiquitination // traceable author statement /// 0000729 // DNA double-strand break processing // inferred from mutant phenotype /// 0006282 // regulation of DNA repair // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0016567 // protein ubiquitination // traceable author statement /// 0032436 // positive regulation of proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0045739 // positive regulation of DNA repair // inferred from electronic annotation /// 0051965 // positive regulation of synapse assembly // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // traceable author statement /// 0031372 // UBC13-MMS2 complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation","chr8:48920975-48974452 (+) // 98.66 // q11.21"]
["11740110_a_at",65.156334,65.55601,75.634026,53.54766,62.025032,65.698425,-0.0044116974,0.0044112206,0.21071863,-0.28749323,-0.075466156,0.0075416565,0.47040087,0.16876149,1.1397457,0.18871199,1.1397457,"up","ATXN7L1",222255,"","","","chr7:105399582-105517033 (-) // 62.48 // q22.3"]
["11730095_at",32.040344,28.779224,29.243242,27.90579,27.31643,26.736769,0.1770935,0.022231579,0.04530716,-0.022231579,-0.053027153,-0.08397102,0.2787144,0.058932245,1.0978041,0.13462059,1.0978041,"up","KHDC3L",154288,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007094 // mitotic cell cycle spindle assembly checkpoint // inferred from electronic annotation /// 0090307 // spindle assembly involved in mitosis // inferred from electronic annotation","0005938 // cell cortex // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045179 // apical cortex // inferred from electronic annotation","","chr6:74072399-74073898 (+) // 96.14 // q13"]
["11728967_x_at",62.79441,67.569824,82.985855,82.540054,80.76726,72.81017,-0.2883196,-0.18257618,0.1139102,0.10613918,0.07481527,-0.07481527,0.6278871,0.30937397,-1.1129394,-0.15437499,1.1129394,"down","ZNF468",90333,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:53342042-53360877 (-) // 67.9 // q13.41"]
["11724072_a_at",94.495384,90.21328,83.40817,78.0995,72.19179,71.33419,0.22749329,0.16058922,0.047437668,-0.04743719,-0.16091585,-0.17815638,0.13991931,0.014718508,1.2091639,0.27400982,1.2091639,"up","ZSWIM3",140831,"","","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr20:44486219-44507770 (+) // 99.12 // q13.12"]
["11752095_a_at",8.209966,7.0445466,8.584884,7.177593,6.8910203,6.7606115,0.2073729,-0.013496637,0.27179503,0.013496637,-0.04528594,-0.07284975,0.36828002,0.102392994,1.1408455,0.19010347,1.1408455,"up","PTPRC",5788,"0000187 // activation of MAPK activity // inferred from electronic annotation /// 0001915 // negative regulation of T cell mediated cytotoxicity // inferred from sequence or structural similarity /// 0001916 // positive regulation of T cell mediated cytotoxicity // inferred from electronic annotation /// 0001960 // negative regulation of cytokine-mediated signaling pathway // inferred from sequence or structural similarity /// 0002244 // hemopoietic progenitor cell differentiation // inferred from mutant phenotype /// 0002378 // immunoglobulin biosynthetic process // inferred from mutant phenotype /// 0002711 // positive regulation of T cell mediated immunity // inferred from electronic annotation /// 0002923 // regulation of humoral immune response mediated by circulating immunoglobulin // inferred from electronic annotation /// 0002925 // positive regulation of humoral immune response mediated by circulating immunoglobulin // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // inferred from direct assay /// 0006469 // negative regulation of protein kinase activity // inferred from sequence or structural similarity /// 0006470 // protein dephosphorylation // inferred from sequence or structural similarity /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0006933 // negative regulation of cell adhesion involved in substrate-bound cell migration // inferred from mutant phenotype /// 0007159 // leukocyte cell-cell adhesion // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0010332 // response to gamma radiation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from sequence or structural similarity /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0030183 // B cell differentiation // inferred from electronic annotation /// 0030217 // T cell differentiation // inferred from sequence or structural similarity /// 0030890 // positive regulation of B cell proliferation // inferred from mutant phenotype /// 0030890 // positive regulation of B cell proliferation // inferred from electronic annotation /// 0031953 // negative regulation of protein autophosphorylation // inferred from electronic annotation /// 0033261 // regulation of S phase // inferred from mutant phenotype /// 0034113 // heterotypic cell-cell adhesion // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from direct assay /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// 0042098 // T cell proliferation // inferred from electronic annotation /// 0042100 // B cell proliferation // inferred from sequence or structural similarity /// 0042102 // positive regulation of T cell proliferation // inferred from sequence or structural similarity /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0045059 // positive thymic T cell selection // inferred from electronic annotation /// 0045060 // negative thymic T cell selection // inferred from electronic annotation /// 0045577 // regulation of B cell differentiation // inferred from electronic annotation /// 0045582 // positive regulation of T cell differentiation // inferred from electronic annotation /// 0045588 // positive regulation of gamma-delta T cell differentiation // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // non-traceable author statement /// 0046641 // positive regulation of alpha-beta T cell proliferation // inferred from electronic annotation /// 0048304 // positive regulation of isotype switching to IgG isotypes // inferred from electronic annotation /// 0048539 // bone marrow development // inferred from mutant phenotype /// 0048864 // stem cell development // inferred from mutant phenotype /// 0050732 // negative regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// 0050852 // T cell receptor signaling pathway // inferred from direct assay /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0050852 // T cell receptor signaling pathway // inferred from electronic annotation /// 0050853 // B cell receptor signaling pathway // inferred from sequence or structural similarity /// 0050853 // B cell receptor signaling pathway // inferred from electronic annotation /// 0050855 // regulation of B cell receptor signaling pathway // inferred from electronic annotation /// 0050857 // positive regulation of antigen receptor-mediated signaling pathway // inferred from sequence or structural similarity /// 0051209 // release of sequestered calcium ion into cytosol // inferred from sequence or structural similarity /// 0051607 // defense response to virus // inferred from sequence or structural similarity /// 0051607 // defense response to virus // inferred from electronic annotation /// 0051726 // regulation of cell cycle // inferred from sequence or structural similarity /// 2000473 // positive regulation of hematopoietic stem cell migration // inferred from mutant phenotype /// 2000648 // positive regulation of stem cell proliferation // inferred from mutant phenotype","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from sequence or structural similarity /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0005925 // focal adhesion // inferred from sequence or structural similarity /// 0009897 // external side of plasma membrane // inferred from direct assay /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation /// 0071944 // cell periphery // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from direct assay /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005001 // transmembrane receptor protein tyrosine phosphatase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0043395 // heparan sulfate proteoglycan binding // inferred from electronic annotation","chr1:198608224-198719756 (+) // 96.38 // q31.3"]
["11758177_x_at",253.19417,236.4135,244.5779,197.36156,196.3711,175.15054,0.22916746,0.13023567,0.17921686,-0.13023567,-0.13749361,-0.3024807,0.07753768,0.0042343675,1.2920035,0.36960998,1.2920035,"up","LRWD1 /// MIR4467","100616367 /// 222229","0000080 // G1 phase of mitotic cell cycle // inferred from mutant phenotype /// 0006260 // DNA replication // inferred from electronic annotation /// 0006270 // DNA-dependent DNA replication initiation // traceable author statement /// 0006325 // chromatin organization // inferred from mutant phenotype /// 0016568 // chromatin modification // inferred from electronic annotation /// 0071169 // establishment of protein localization to chromatin // inferred from direct assay","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000781 // chromosome, telomeric region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005664 // nuclear origin of replication recognition complex // inferred from direct assay /// 0005694 // chromosome // inferred from electronic annotation /// 0005721 // centromeric heterochromatin // inferred from direct assay /// 0031933 // telomeric heterochromatin // inferred from direct assay","0003682 // chromatin binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008327 // methyl-CpG binding // inferred from direct assay /// 0035064 // methylated histone residue binding // inferred from direct assay","chr7:102113157-102113597 (+) // 92.24 // q22.1"]
["11729288_at",84.68573,83.554794,87.12316,97.52914,94.62365,110.12666,-0.10050964,-0.11990595,-0.05957222,0.10320473,0.059571743,0.27846336,0.18343636,0.02550172,-1.1813277,-0.24040923,1.1813277,"down","MSL3",10943,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0016568 // chromatin modification // inferred from electronic annotation /// 0043984 // histone H4-K16 acetylation // inferred from direct assay","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0072487 // MSL complex // inferred from direct assay","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0035064 // methylated histone residue binding // inferred from direct assay","chrX:11776277-11786410 (+) // 71.57 // p22.2"]
["11755166_a_at",771.21387,638.22723,608.10297,561.8205,551.458,525.93896,0.39991856,0.12685776,0.057103157,-0.057103157,-0.08396149,-0.15231705,0.26765856,0.054192796,1.2246932,0.29242036,1.2246932,"up","ESAM",90952,"0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007596 // blood coagulation // traceable author statement /// 0016337 // cell-cell adhesion // inferred from electronic annotation /// 0050900 // leukocyte migration // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005912 // adherens junction // inferred from electronic annotation /// 0005923 // tight junction // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","","chr11:124623024-124627433 (-) // 83.1 // q24.2"]
["11721835_s_at",2903.9893,2860.8428,2883.4702,2943.279,2725.078,2796.0564,0.01591301,-0.0056829453,0.0056829453,0.03530121,-0.07582569,-0.038729668,0.69825774,0.3941456,1.0222318,0.0317224,1.0222318,"up","TMEM14B",81853,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr6:10747994-10757213 (+) // 96.23 // p24.2"]
["11739628_a_at",121.64327,136.615,129.30725,148.24432,131.6339,140.8324,-0.14066696,0.026792526,-0.052520752,0.14465332,-0.026792526,0.070655346,0.46335378,0.16303326,-1.0854579,-0.1183038,1.0854579,"down","CSF1",1435,"0001503 // ossification // inferred from electronic annotation /// 0001954 // positive regulation of cell-matrix adhesion // inferred from sequence or structural similarity /// 0001954 // positive regulation of cell-matrix adhesion // inferred from electronic annotation /// 0003006 // developmental process involved in reproduction // inferred from sequence or structural similarity /// 0003006 // developmental process involved in reproduction // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from electronic annotation /// 0008283 // cell proliferation // non-traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from direct assay /// 0008284 // positive regulation of cell proliferation // traceable author statement /// 0010628 // positive regulation of gene expression // inferred from direct assay /// 0010743 // regulation of macrophage derived foam cell differentiation // non-traceable author statement /// 0010744 // positive regulation of macrophage derived foam cell differentiation // inferred from direct assay /// 0030097 // hemopoiesis // non-traceable author statement /// 0030154 // cell differentiation // non-traceable author statement /// 0030225 // macrophage differentiation // traceable author statement /// 0030225 // macrophage differentiation // inferred from electronic annotation /// 0030278 // regulation of ossification // inferred from electronic annotation /// 0030316 // osteoclast differentiation // inferred from direct assay /// 0030335 // positive regulation of cell migration // inferred from sequence or structural similarity /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0032270 // positive regulation of cellular protein metabolic process // inferred from direct assay /// 0032946 // positive regulation of mononuclear cell proliferation // inferred from direct assay /// 0040018 // positive regulation of multicellular organism growth // inferred from electronic annotation /// 0042117 // monocyte activation // non-traceable author statement /// 0042476 // odontogenesis // inferred from electronic annotation /// 0042488 // positive regulation of odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0045087 // innate immune response // inferred from electronic annotation /// 0045651 // positive regulation of macrophage differentiation // inferred from direct assay /// 0045651 // positive regulation of macrophage differentiation // inferred from electronic annotation /// 0045657 // positive regulation of monocyte differentiation // inferred from sequence or structural similarity /// 0045657 // positive regulation of monocyte differentiation // inferred from electronic annotation /// 0045672 // positive regulation of osteoclast differentiation // inferred from direct assay /// 0045672 // positive regulation of osteoclast differentiation // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from sequence or structural similarity /// 0045860 // positive regulation of protein kinase activity // inferred from electronic annotation /// 0046579 // positive regulation of Ras protein signal transduction // inferred from electronic annotation /// 0048873 // homeostasis of number of cells within a tissue // inferred from electronic annotation /// 0060444 // branching involved in mammary gland duct morphogenesis // inferred from electronic annotation /// 0060611 // mammary gland fat development // inferred from electronic annotation /// 0060763 // mammary duct terminal end bud growth // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0043235 // receptor complex // inferred from sequence or structural similarity /// 0043235 // receptor complex // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005125 // cytokine activity // inferred from direct assay /// 0005125 // cytokine activity // inferred from electronic annotation /// 0005157 // macrophage colony-stimulating factor receptor binding // inferred from sequence or structural similarity /// 0005157 // macrophage colony-stimulating factor receptor binding // traceable author statement /// 0005157 // macrophage colony-stimulating factor receptor binding // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from direct assay /// 0008083 // growth factor activity // non-traceable author statement /// 0008083 // growth factor activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr1:110453232-110472656 (+) // 96.98 // p13.3"]
["11741188_a_at",94.39612,101.90713,98.40137,87.26553,102.339134,103.713974,-0.085202694,0.025252819,-0.025252342,-0.19851875,0.03135538,0.05060768,0.9674536,0.9093026,1.0072705,0.010451104,1.0072705,"up","SLC30A6",55676,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006812 // cation transport // inferred from electronic annotation /// 0006829 // zinc ion transport // inferred from electronic annotation /// 0006895 // Golgi to endosome transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0071577 // zinc ion transmembrane transport // inferred from electronic annotation","0000139 // Golgi membrane // traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005385 // zinc ion transmembrane transporter activity // inferred from electronic annotation /// 0008324 // cation transmembrane transporter activity // inferred from electronic annotation","chr2:32390916-32446809 (+) // 85.78 // p22.3"]
["11745010_a_at",214.19977,190.42815,201.70561,185.27391,167.32231,160.00449,0.18950415,0.01979351,0.10279846,-0.01979351,-0.16682291,-0.23134041,0.2217782,0.03760978,1.183739,0.24335095,1.183739,"up","DCBLD2",131566,"0007155 // cell adhesion // inferred from electronic annotation /// 0030308 // negative regulation of cell growth // inferred from direct assay /// 0030522 // intracellular receptor mediated signaling pathway // non-traceable author statement /// 0042060 // wound healing // inferred from direct assay","0005887 // integral to plasma membrane // inferred from direct assay /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr3:98516626-98620034 (-) // 97.36 // q12.1"]
["11734608_x_at",104.02741,105.12197,100.722855,109.38952,100.69962,97.371895,0.023286343,0.0383873,-0.023285866,0.095798016,-0.023618698,-0.072099686,0.9352445,0.82220554,1.0088904,0.012769443,1.0088904,"up","SHQ1",55164,"0022618 // ribonucleoprotein complex assembly // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 2000233 // negative regulation of rRNA processing // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from electronic annotation /// 0015030 // Cajal body // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr3:72798427-72897599 (-) // 73.2 // p13"]
["11752538_a_at",8.400488,8.046236,8.981003,7.399413,8.471138,8.792549,-0.0060412884,-0.06820035,0.09036231,-0.18910336,0.006041527,0.059767246,0.8453964,0.62753415,1.0327362,0.046471756,1.0327362,"up","GABRG1",2565,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006821 // chloride transport // inferred from electronic annotation /// 0007214 // gamma-aminobutyric acid signaling pathway // inferred from electronic annotation /// 0007268 // synaptic transmission // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0034707 // chloride channel complex // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004890 // GABA-A receptor activity // inferred from electronic annotation /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion channel activity // inferred from electronic annotation /// 0005254 // chloride channel activity // inferred from electronic annotation","chr4:46042610-46126082 (-) // 94.54 // p12"]
["11753319_a_at",51.39291,49.808167,46.968426,51.28831,45.902996,60.843533,0.02406311,-0.021123886,-0.105814934,0.021123886,-0.13891792,0.26759768,0.7928691,0.53490627,-1.0601192,-0.08422642,1.0601192,"down","KCNMB3",27094,"0001508 // regulation of action potential // inferred from direct assay /// 0005513 // detection of calcium ion // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from direct assay /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0019228 // regulation of action potential in neuron // inferred from direct assay","0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0008076 // voltage-gated potassium channel complex // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0015269 // calcium-activated potassium channel activity // inferred from direct assay /// 0015269 // calcium-activated potassium channel activity // inferred from electronic annotation /// 0015459 // potassium channel regulator activity // non-traceable author statement /// 0015459 // potassium channel regulator activity // traceable author statement","chr3:178957593-178984790 (-) // 99.9 // q26.32"]
["11736833_a_at",36.410606,47.399647,50.200542,37.971493,43.847782,59.056644,-0.32433128,0.0561862,0.13901281,-0.26377344,-0.0561862,0.37340927,0.9292276,0.8089852,-1.0430878,-0.060860652,1.0430878,"down","ZNF619",285267,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:40518603-40530069 (+) // 97.06 // p22.1"]
["11748543_a_at",163.17093,157.35516,151.58556,169.10588,168.37688,185.05328,-0.022655487,-0.07501459,-0.12890673,0.028887749,0.02265501,0.15890217,0.2676419,0.054157555,-1.1062473,-0.14567395,1.1062473,"down","TXNIP",10628,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006606 // protein import into nucleus // inferred from electronic annotation /// 0006979 // response to oxidative stress // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0009612 // response to mechanical stimulus // inferred from electronic annotation /// 0009749 // response to glucose stimulus // inferred from electronic annotation /// 0030216 // keratinocyte differentiation // inferred from direct assay /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0032570 // response to progesterone stimulus // inferred from electronic annotation /// 0035872 // nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway // traceable author statement /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042542 // response to hydrogen peroxide // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0048008 // platelet-derived growth factor receptor signaling pathway // inferred from electronic annotation /// 0051592 // response to calcium ion // inferred from electronic annotation /// 0051782 // negative regulation of cell division // inferred from direct assay /// 0071228 // cellular response to tumor cell // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004857 // enzyme inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0031625 // ubiquitin protein ligase binding // inferred from physical interaction","chr1:145439346-145441230 (+) // 100.0 // q21.1"]
["11737251_at",8.122054,9.952135,9.8914,9.374852,8.12813,11.573974,-0.24564075,0.047520876,0.038689375,-0.038689375,-0.24456191,0.26532674,0.92645484,0.8026513,-1.0332352,-0.047168687,1.0332352,"down","CD226",10666,"0001816 // cytokine production // inferred from electronic annotation /// 0002860 // positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target // inferred from mutant phenotype /// 0002891 // positive regulation of immunoglobulin mediated immune response // inferred from direct assay /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0008037 // cell recognition // traceable author statement /// 0033005 // positive regulation of mast cell activation // inferred from direct assay /// 0045954 // positive regulation of natural killer cell mediated cytotoxicity // inferred from mutant phenotype /// 0050776 // regulation of immune response // traceable author statement /// 0060369 // positive regulation of Fc receptor mediated stimulatory signaling pathway // inferred from direct assay","0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0045121 // membrane raft // traceable author statement","0004872 // receptor activity // inferred from electronic annotation /// 0005178 // integrin binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0019901 // protein kinase binding // inferred from physical interaction /// 0050839 // cell adhesion molecule binding // inferred from physical interaction","chr18:67530194-67624232 (-) // 89.61 // q22.2"]
["11749891_a_at",24.788162,27.36456,27.039698,28.492023,34.99004,32.313206,-0.17178202,-0.029124737,-0.046354294,0.029124737,0.32551098,0.2106905,0.25630498,0.049610928,-1.2065288,-0.27086234,1.2065288,"down","HLF",3131,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0007275 // multicellular organismal development // traceable author statement /// 0048511 // rhythmic process // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement","0003677 // DNA binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046983 // protein dimerization activity // inferred from electronic annotation","chr17:53343170-53398775 (+) // 94.51 // q22"]
["11737020_x_at",105.32807,101.71498,100.88951,109.556175,117.42285,119.8456,-0.028390408,-0.0787487,-0.09050465,0.02838993,0.12843227,0.15789604,0.15074053,0.017258842,-1.1256727,-0.17078741,1.1256727,"down","AGAP2",116986,"0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0032312 // regulation of ARF GTPase activity // inferred from electronic annotation /// 0033601 // positive regulation of mammary gland epithelial cell proliferation // inferred from electronic annotation /// 0042177 // negative regulation of protein catabolic process // inferred from direct assay /// 0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from genetic interaction /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation /// 0045860 // positive regulation of protein kinase activity // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0046427 // positive regulation of JAK-STAT cascade // inferred from electronic annotation /// 0060749 // mammary gland alveolus development // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005829 // cytosol // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008060 // ARF GTPase activator activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from electronic annotation /// 0030295 // protein kinase activator activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:58118980-58135984 (-) // 96.98 // q14.1"]
["11746001_x_at",20.843952,19.939987,27.39186,16.937702,15.533265,19.382425,0.08442211,0.020457745,0.47854042,-0.21496868,-0.33984566,-0.020457745,0.3383159,0.086471066,1.3069743,0.38623077,1.3069743,"up","ZNF252P",286101,"","0005622 // intracellular // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation","chr8:146198974-146225155 (-) // 86.83 // q24.3"]
["11762275_x_at",100.14827,112.75414,115.64637,119.13361,121.53746,113.98689,-0.19715643,-0.02611351,0.010426044,0.053286552,0.08210707,-0.010426044,0.48681134,0.18087876,-1.0811778,-0.112603836,1.0811778,"down","UQCRB",7381,"0006119 // oxidative phosphorylation // traceable author statement /// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c // inferred from electronic annotation /// 0009060 // aerobic respiration // traceable author statement /// 0022900 // electron transport chain // inferred from electronic annotation /// 0022904 // respiratory electron transport chain // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // traceable author statement /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005746 // mitochondrial respiratory chain // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0070469 // respiratory chain // inferred from electronic annotation","0008121 // ubiquinol-cytochrome-c reductase activity // inferred from electronic annotation","chr8:97242942-97247774 (-) // 96.64 // q22.1"]
["11730701_at",102.50383,108.354546,111.623566,101.389534,106.784805,124.40366,-0.06955528,0.010526657,0.053408623,-0.08532429,-0.010527134,0.20979595,0.88059294,0.69824123,-1.0280104,-0.039854813,1.0280104,"down","C11orf49",79096,"","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay","","chr11:46958250-47185932 (+) // 98.78 // p11.2"]
["11743503_a_at",576.9804,562.26526,554.1094,550.2694,491.90308,528.9161,0.06336784,0.026096344,0.005016327,-0.005016327,-0.16678047,-0.06211567,0.35485667,0.09534685,1.0788276,0.10946436,1.0788276,"up","GTF3C2",2976,"0006351 // transcription, DNA-dependent // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006383 // transcription from RNA polymerase III promoter // inferred from direct assay /// 0006383 // transcription from RNA polymerase III promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0042791 // 5S class rRNA transcription from RNA polymerase III type 1 promoter // inferred by curator /// 0042797 // tRNA transcription from RNA polymerase III promoter // inferred by curator","0000127 // transcription factor TFIIIC complex // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement","0003677 // DNA binding // inferred from direct assay","chr2:27548521-27579896 (-) // 93.44 // p23.3"]
["11758812_at",40.82606,53.40052,61.103363,45.91008,47.980392,49.563232,-0.2563672,0.13099623,0.32539415,-0.08704662,-0.023412704,0.023412704,0.8360059,0.61154777,1.0685763,0.095689975,1.0685763,"up","SHFM1",7979,"0000724 // double-strand break repair via homologous recombination // inferred from electronic annotation /// 0006508 // proteolysis // inferred from direct assay /// 0006508 // proteolysis // inferred from sequence or structural similarity","0000502 // proteasome complex // inferred from direct assay /// 0000502 // proteasome complex // inferred from electronic annotation /// 0000502 // proteasome complex // inferred from sequence or structural similarity /// 0032039 // integrator complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from direct assay /// 0008233 // peptidase activity // inferred from sequence or structural similarity","chr7:96317911-96339202 (-) // 74.7 // q21.3"]
["11742940_s_at",1824.9088,1575.3245,1583.38,1558.8928,1406.455,1287.728,0.21973896,0.007563591,0.014922142,-0.007563591,-0.15602207,-0.28325748,0.35525456,0.095574446,1.1725824,0.22968929,1.1725824,"up","UBE2D3",7323,"0000209 // protein polyubiquitination // inferred from direct assay /// 0006281 // DNA repair // inferred from electronic annotation /// 0006464 // cellular protein modification process // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0006513 // protein monoubiquitination // inferred from direct assay /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030509 // BMP signaling pathway // traceable author statement /// 0032480 // negative regulation of type I interferon production // traceable author statement /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0070936 // protein K48-linked ubiquitination // inferred from direct assay /// 0070979 // protein K11-linked ubiquitination // inferred from direct assay","0005654 // nucleoplasm // traceable author statement /// 0005768 // endosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from electronic annotation","chr4:103717132-103749105 (-) // 85.58 // q24"]
["11763702_a_at",209.20502,200.75299,194.26651,168.71385,163.0299,166.17403,0.20861006,0.14911413,0.10172939,-0.10172939,-0.15117073,-0.123612404,0.04440257,0.0012167057,1.2130637,0.27865532,1.2130637,"up","WDR48",57599,"0016579 // protein deubiquitination // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005764 // lysosome // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr3:39131058-39138155 (+) // 75.9 // p22.2"]
["11739178_a_at",33.838017,51.932404,40.722305,39.854782,56.750153,49.548492,-0.4086852,0.20930481,-0.14151096,-0.17257738,0.33729362,0.14151096,0.7067264,0.40610835,-1.1612722,-0.21570614,1.1612722,"down","ISM2",145501,"","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay","","chr14:77940736-77965687 (-) // 89.18 // q24.3"]
["11740300_x_at",41.755653,37.308258,37.666084,33.88903,36.98405,38.01382,0.15559101,-0.0068855286,0.0068855286,-0.14556217,-0.019477367,0.020143509,0.5560439,0.23722063,1.071894,0.10016231,1.071894,"up","MARCH2",51257,"0006897 // endocytosis // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:8478181-8503897 (+) // 87.77 // p13.2"]
["11746150_s_at",201.72289,241.55602,220.0381,237.45432,201.24022,229.29842,-0.15511513,0.104867935,-0.029736519,0.08016062,-0.15857124,0.029736519,0.9738644,0.9252254,-1.0072603,-0.010436591,1.0072603,"down","AGAP9 /// BMS1 /// BMS1P1 /// BMS1P2 /// BMS1P4 /// BMS1P5 /// BMS1P6","399761 /// 414216 /// 642517 /// 642826 /// 728053 /// 729096 /// 9790","0006184 // GTP catabolic process // inferred from electronic annotation /// 0032312 // regulation of ARF GTPase activity // inferred from electronic annotation /// 0042254 // ribosome biogenesis // inferred from electronic annotation /// 0042255 // ribosome assembly // inferred from sequence or structural similarity /// 0043547 // positive regulation of GTPase activity // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from sequence or structural similarity /// 0005730 // nucleolus // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from electronic annotation /// 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0008060 // ARF GTPase activator activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr10:75461120-75490263 (-) // 77.69 // q22.2"]
["11761672_at",18.082918,23.061392,13.559821,20.400473,20.743824,20.923199,-0.18601465,0.16483736,-0.6013043,-0.012039661,0.012039661,0.02446127,0.69142467,0.3857544,-1.1612251,-0.21564764,1.1612251,"down","SLC16A5",9121,"0006810 // transport // inferred from electronic annotation /// 0015711 // organic anion transport // inferred from electronic annotation /// 0015718 // monocarboxylic acid transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008028 // monocarboxylic acid transmembrane transporter activity // traceable author statement /// 0015293 // symporter activity // inferred from electronic annotation /// 0015355 // secondary active monocarboxylate transmembrane transporter activity // inferred from electronic annotation","chr17:73089381-73100505 (+) // 96.42 // q25.1"]
["11733259_s_at",309.66156,292.59232,275.0109,362.86838,319.51532,286.25018,0.04090023,-0.04090023,-0.13030338,0.26965427,0.08609295,-0.07251549,0.6005072,0.2804069,-1.1002604,-0.13784498,1.1002604,"down","TAOK3",51347,"0000165 // MAPK cascade // inferred from mutant phenotype /// 0006281 // DNA repair // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006469 // negative regulation of protein kinase activity // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0031572 // G2/M transition DNA damage checkpoint // inferred from mutant phenotype /// 0032874 // positive regulation of stress-activated MAPK cascade // inferred from mutant phenotype /// 0043507 // positive regulation of JUN kinase activity // inferred from mutant phenotype /// 0046329 // negative regulation of JNK cascade // inferred from direct assay /// 0046330 // positive regulation of JNK cascade // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004860 // protein kinase inhibitor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from direct assay /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr12:118587605-118810750 (-) // 95.99 // q24.23"]
["11762103_a_at",12.1355505,10.316336,14.172264,15.272458,15.296386,13.187288,-0.17186952,-0.4061787,0.051961184,0.15982318,0.16208172,-0.051961184,0.447726,0.15184212,-1.2019223,-0.26534364,1.2019223,"down","ZNF274",10782,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from electronic annotation /// 0005730 // nucleolus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:58694475-58722075 (+) // 81.93 // q13.43"]
["11752248_a_at",28.895227,33.21122,30.379444,25.059164,26.343927,25.682436,0.06668043,0.26751995,0.13894463,-0.13881254,-0.06668043,-0.10336876,0.13561063,0.013883277,1.198034,0.2606689,1.198034,"up","MET",4233,"0000187 // activation of MAPK activity // inferred from electronic annotation /// 0001101 // response to acid // inferred from electronic annotation /// 0001764 // neuron migration // inferred from electronic annotation /// 0001889 // liver development // inferred from electronic annotation /// 0001890 // placenta development // inferred from electronic annotation /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007165 // signal transduction // traceable author statement /// 0007166 // cell surface receptor signaling pathway // non-traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007411 // axon guidance // traceable author statement /// 0007420 // brain development // inferred from electronic annotation /// 0007517 // muscle organ development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0007569 // cell aging // inferred from electronic annotation /// 0007595 // lactation // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0008584 // male gonad development // inferred from electronic annotation /// 0009611 // response to wounding // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010800 // positive regulation of peptidyl-threonine phosphorylation // inferred from electronic annotation /// 0010801 // negative regulation of peptidyl-threonine phosphorylation // inferred from electronic annotation /// 0010828 // positive regulation of glucose transport // inferred from electronic annotation /// 0010976 // positive regulation of neuron projection development // inferred from electronic annotation /// 0014003 // oligodendrocyte development // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0014812 // muscle cell migration // inferred from electronic annotation /// 0014902 // myotube differentiation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0021953 // central nervous system neuron differentiation // inferred from electronic annotation /// 0030317 // sperm motility // inferred from electronic annotation /// 0030534 // adult behavior // inferred from electronic annotation /// 0031016 // pancreas development // inferred from electronic annotation /// 0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0042593 // glucose homeostasis // inferred from electronic annotation /// 0043434 // response to peptide hormone stimulus // inferred from electronic annotation /// 0045740 // positive regulation of DNA replication // inferred from electronic annotation /// 0045840 // positive regulation of mitosis // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048012 // hepatocyte growth factor receptor signaling pathway // traceable author statement /// 0048012 // hepatocyte growth factor receptor signaling pathway // inferred from electronic annotation /// 0048754 // branching morphogenesis of a tube // inferred from mutant phenotype /// 0050775 // positive regulation of dendrite morphogenesis // inferred from electronic annotation /// 0051450 // myoblast proliferation // inferred from electronic annotation /// 0060665 // regulation of branching involved in salivary gland morphogenesis by mesenchymal-epithelial signaling // inferred from electronic annotation /// 0071241 // cellular response to inorganic substance // inferred from electronic annotation /// 0071243 // cellular response to arsenic-containing substance // inferred from electronic annotation /// 0071333 // cellular response to glucose stimulus // inferred from electronic annotation /// 0071354 // cellular response to interleukin-6 // inferred from electronic annotation /// 0071363 // cellular response to growth factor stimulus // inferred from electronic annotation /// 0071375 // cellular response to peptide hormone stimulus // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009925 // basal plasma membrane // inferred from direct assay /// 0014069 // postsynaptic density // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation /// 0019861 // flagellum // inferred from electronic annotation /// 0030425 // dendrite // inferred from electronic annotation /// 0043005 // neuron projection // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation /// 0060076 // excitatory synapse // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // non-traceable author statement /// 0004713 // protein tyrosine kinase activity // traceable author statement /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005008 // hepatocyte growth factor-activated receptor activity // traceable author statement /// 0005008 // hepatocyte growth factor-activated receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008013 // beta-catenin binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0032403 // protein complex binding // inferred from electronic annotation /// 0043274 // phospholipase binding // inferred from electronic annotation /// 0043548 // phosphatidylinositol 3-kinase binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr7:116339138-116399652 (+) // 99.92 // q31.2"]
["11728807_at",89.228195,97.00752,107.97406,95.3529,105.05942,108.686005,-0.17811537,-0.057518482,0.09699774,-0.08233833,0.057518482,0.106479645,0.7675097,0.4939751,-1.0522168,-0.07343195,1.0522168,"down","SIRT5",23408,"0006342 // chromatin silencing // traceable author statement /// 0006471 // protein ADP-ribosylation // traceable author statement /// 0006476 // protein deacetylation // inferred from direct assay /// 0036047 // peptidyl-lysine demalonylation // inferred from direct assay /// 0036047 // peptidyl-lysine demalonylation // inferred from electronic annotation /// 0036049 // peptidyl-lysine desuccinylation // inferred from direct assay /// 0036049 // peptidyl-lysine desuccinylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from direct assay /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from direct assay /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0003950 // NAD+ ADP-ribosyltransferase activity // traceable author statement /// 0008270 // zinc ion binding // inferred from direct assay /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0036054 // protein-malonyllysine demalonylase activity // inferred from direct assay /// 0036054 // protein-malonyllysine demalonylase activity // inferred from electronic annotation /// 0036055 // protein-succinyllysine desuccinylase activity // inferred from direct assay /// 0036055 // protein-succinyllysine desuccinylase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070403 // NAD+ binding // inferred from direct assay /// 0070403 // NAD+ binding // inferred from electronic annotation","chr6:13579032-13605971 (+) // 89.3 // p23"]
["11718039_at",284.3896,305.03955,283.22025,211.51303,200.5087,234.317,0.1426754,0.24380302,0.13673115,-0.28444672,-0.3615284,-0.13673162,0.077862546,0.004286943,1.352197,0.4353054,1.352197,"up","DCAF12",25853,"0016567 // protein ubiquitination // inferred by curator /// 0016567 // protein ubiquitination // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0080008 // CUL4-RING ubiquitin ligase complex // inferred from direct assay","","chr9:34086384-34126771 (-) // 94.9 // p13.3"]
["11761827_x_at",74.20226,68.65174,67.04102,57.716927,64.80105,67.62387,0.14017487,0.028007507,-0.0062441826,-0.22229385,-0.05527115,0.0062441826,0.4459201,0.15048617,1.105286,0.14441973,1.105286,"up","C21orf58",54058,"","","","chr21:47734784-47743783 (-) // 79.81 // q22.3"]
["11731317_a_at",29.198893,33.383522,32.49706,27.723984,34.006092,35.205414,-0.17380905,0.019413471,-0.019413471,-0.24858809,0.046070576,0.09607458,0.95101935,0.8636424,-1.0156866,-0.022455357,1.0156866,"down","MMP28",79148,"0006508 // proteolysis // non-traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0004222 // metalloendopeptidase activity // traceable author statement /// 0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:34105508-34122640 (-) // 95.83 // q12"]
["11735529_s_at",31.00489,47.56652,41.455505,35.887867,39.42328,38.753628,-0.3341937,0.283257,0.08487415,-0.123193264,0.012358189,-0.012358189,0.9226667,0.7929851,1.0369719,0.052376837,1.0369719,"up","KLK14",43847,"0006508 // proteolysis // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0009566 // fertilization // inferred from direct assay /// 0045744 // negative regulation of G-protein coupled receptor protein signaling pathway // inferred from direct assay /// 0045745 // positive regulation of G-protein coupled receptor protein signaling pathway // inferred from direct assay /// 0048730 // epidermis morphogenesis // inferred from direct assay /// 0070684 // seminal clot liquefaction // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from direct assay /// 0004252 // serine-type endopeptidase activity // non-traceable author statement /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr19:51581153-51587502 (-) // 92.32 // q13.41"]
["11722238_a_at",578.4002,540.1896,511.56866,544.7681,586.88336,569.401,0.05452442,-0.044077873,-0.122615814,-0.03190136,0.07553005,0.03190136,0.66799355,0.35587794,-1.0443219,-0.06256647,1.0443219,"down","DPM3",54344,"0005975 // carbohydrate metabolic process // non-traceable author statement /// 0006488 // dolichol-linked oligosaccharide biosynthetic process // traceable author statement /// 0006501 // C-terminal protein lipidation // traceable author statement /// 0006506 // GPI anchor biosynthetic process // inferred from direct assay /// 0006506 // GPI anchor biosynthetic process // traceable author statement /// 0018279 // protein N-linked glycosylation via asparagine // traceable author statement /// 0018406 // protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan // traceable author statement /// 0031647 // regulation of protein stability // inferred from physical interaction /// 0035268 // protein mannosylation // traceable author statement /// 0035269 // protein O-linked mannosylation // traceable author statement /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030176 // integral to endoplasmic reticulum membrane // inferred from direct assay /// 0031501 // mannosyltransferase complex // traceable author statement /// 0033185 // dolichol-phosphate-mannose synthase complex // inferred from direct assay","0004582 // dolichyl-phosphate beta-D-mannosyltransferase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity, transferring glycosyl groups // inferred from electronic annotation","chr1:155112366-155113071 (-) // 74.87 // q22"]
["11752302_a_at",137.55621,177.49228,145.80006,113.84227,123.57422,167.25883,-0.041985035,0.3257494,0.041985035,-0.3149705,-0.19662857,0.24007607,0.687167,0.3804564,1.1479746,0.19909073,1.1479746,"up","LAMB3",3914,"0007155 // cell adhesion // inferred from electronic annotation /// 0008544 // epidermis development // traceable author statement /// 0031581 // hemidesmosome assembly // traceable author statement /// 0034329 // cell junction assembly // traceable author statement /// 0050873 // brown fat cell differentiation // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0005604 // basement membrane // inferred from electronic annotation /// 0005610 // laminin-5 complex // inferred from electronic annotation","0005198 // structural molecule activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0032403 // protein complex binding // inferred from electronic annotation","chr1:209790922-209825770 (-) // 99.91 // q32.2"]
["11732974_at",24.543434,36.053257,35.746616,27.034006,31.129435,34.42301,-0.4154892,0.1393032,0.1269803,-0.27605104,-0.07254696,0.07254696,0.94618565,0.8495462,1.0297412,0.04228175,1.0297412,"up","OR1D2",4991,"0000060 // protein import into nucleus, translocation // inferred from mutant phenotype /// 0006928 // cellular component movement // traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from direct assay /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007338 // single fertilization // inferred from electronic annotation /// 0007608 // sensory perception of smell // traceable author statement /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from direct assay /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004984 // olfactory receptor activity // inferred from direct assay /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr17:2995351-2996290 (-) // 97.41 // p13.3"]
["11717565_s_at",336.86765,333.55627,360.92062,347.72293,312.8896,335.72632,0.002448082,-0.011803627,0.101947784,0.048204422,-0.1040802,-0.002448082,0.7236131,0.4296558,1.0354841,0.050305367,1.0354841,"up","EMP1",2012,"0007275 // multicellular organismal development // traceable author statement /// 0008283 // cell proliferation // traceable author statement /// 0008544 // epidermis development // traceable author statement /// 0016049 // cell growth // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement","","chr12:13349448-13371604 (+) // 93.18 // p13.1"]
["11754820_a_at",44.959225,61.23759,62.723034,46.779015,65.35295,60.18518,-0.43329525,0.0125050545,0.0470829,-0.37605095,0.106339455,-0.012504578,0.9619134,0.89261776,-1.021364,-0.030497076,1.021364,"down","RLTPR",146206,"","","","chr16:67681771-67687115 (+) // 93.38 // q22.1"]
["11716241_x_at",571.2211,462.6162,454.98636,558.2289,456.23624,452.19247,0.31425095,0.010017395,-0.013975143,0.2810583,-0.010017395,-0.02286148,0.9622778,0.8933141,1.0144548,0.020704646,1.0144548,"up","RAB6A",5870,"0000042 // protein targeting to Golgi // inferred from direct assay /// 0006184 // GTP catabolic process // inferred from direct assay /// 0006184 // GTP catabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0018125 // peptidyl-cysteine methylation // inferred from direct assay /// 0034067 // protein localization in Golgi apparatus // inferred from direct assay /// 0072385 // minus-end-directed organelle transport along microtubule // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from direct assay /// 0003924 // GTPase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from direct assay /// 0005525 // GTP binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction","chr11:73386684-73472185 (-) // 96.38 // q13.4"]
["11738072_a_at",115.9554,134.33418,125.338066,112.77811,118.36852,121.923225,-0.051059246,0.16119719,0.061195374,-0.09114218,-0.021343708,0.021343708,0.5971893,0.2766693,1.0625213,0.08749181,1.0625213,"up","LRCH3",84859,"","0005576 // extracellular region // inferred from electronic annotation","","chr3:197518144-197598856 (+) // 84.53 // q29"]
["11716593_x_at",499.41656,424.34546,451.1755,454.05045,444.07443,447.38947,0.15263367,-0.08237076,0.00607872,0.015242577,-0.01680851,-0.00607872,0.88499177,0.70639014,1.0195944,0.027995398,1.0195944,"up","BTBD1",53339,"0016567 // protein ubiquitination // inferred from electronic annotation /// 0043393 // regulation of protein binding // non-traceable author statement","0000932 // cytoplasmic mRNA processing body // inferred from direct assay /// 0000932 // cytoplasmic mRNA processing body // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0043234 // protein complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr15:83685174-83736186 (-) // 96.3 // q25.2"]
["11760831_x_at",48.515656,38.325848,44.21408,44.829937,37.34321,42.40543,0.16407299,-0.17605972,0.030128479,0.050085068,-0.2135315,-0.030128479,0.8329425,0.60526043,1.0501331,0.070572205,1.0501331,"up","FAHD2B /// FAHD2CP","151313 /// 729234","0008152 // metabolic process // inferred from electronic annotation","","0003824 // catalytic activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:96676345-96681598 (+) // 71.1 // q11.1 /// chr2:97755320-97760572 (-) // 75.0 // q11.2"]
["11721014_s_at",357.8896,325.1095,310.8094,423.78537,348.83423,330.3687,0.07620525,-0.06238365,-0.12727928,0.3200245,0.039232254,-0.039232254,0.6289118,0.3102674,-1.105343,-0.1444941,1.105343,"down","WTAP",9589,"0006397 // mRNA processing // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008380 // RNA splicing // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay","","chr6:160148026-160171040 (+) // 99.51 // q25.3"]
["11716588_at",528.1031,543.53436,562.6969,680.22144,768.78644,642.28986,-0.18697166,-0.14542007,-0.095433235,0.17821312,0.35479164,0.095433235,0.1271456,0.0121538425,-1.2764063,-0.35208762,1.2764063,"down","TMEM165",55858,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr4:56262089-56292341 (+) // 96.6 // q12"]
["11724015_at",48.86738,46.729702,47.005295,79.34651,59.32396,61.838943,-0.1398716,-0.2044034,-0.19591999,0.55942345,0.13987112,0.19977236,0.17212655,0.022378717,-1.3945059,-0.479754,1.3945059,"down","FRA10AC1",118924,"","0005634 // nucleus // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr10:95428327-95462338 (-) // 79.45 // q23.33"]
["11747477_a_at",32.96969,26.664331,30.367607,27.307972,27.648125,23.478811,0.26288843,-0.043340683,0.14428139,-0.008929729,0.008929729,-0.22689247,0.4693552,0.16772574,1.1462384,0.19690719,1.1462384,"up","MAPK8",5599,"0000165 // MAPK cascade // inferred from electronic annotation /// 0001503 // ossification // inferred from electronic annotation /// 0002224 // toll-like receptor signaling pathway // traceable author statement /// 0002755 // MyD88-dependent toll-like receptor signaling pathway // traceable author statement /// 0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006950 // response to stress // traceable author statement /// 0007254 // JNK cascade // inferred from direct assay /// 0007254 // JNK cascade // traceable author statement /// 0007254 // JNK cascade // inferred from electronic annotation /// 0007258 // JUN phosphorylation // inferred from direct assay /// 0007258 // JUN phosphorylation // inferred from electronic annotation /// 0008063 // Toll signaling pathway // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0009411 // response to UV // inferred from direct assay /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0018107 // peptidyl-threonine phosphorylation // inferred from direct assay /// 0018107 // peptidyl-threonine phosphorylation // inferred from mutant phenotype /// 0018107 // peptidyl-threonine phosphorylation // inferred from electronic annotation /// 0031063 // regulation of histone deacetylation // inferred from mutant phenotype /// 0031558 // induction of apoptosis in response to chemical stimulus // inferred from electronic annotation /// 0032091 // negative regulation of protein binding // inferred from direct assay /// 0032880 // regulation of protein localization // inferred from direct assay /// 0034130 // toll-like receptor 1 signaling pathway // traceable author statement /// 0034134 // toll-like receptor 2 signaling pathway // traceable author statement /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0043066 // negative regulation of apoptotic process // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0046686 // response to cadmium ion // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051090 // regulation of sequence-specific DNA binding transcription factor activity // traceable author statement /// 0051403 // stress-activated MAPK cascade // traceable author statement /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern /// 0090045 // positive regulation of deacetylase activity // inferred from mutant phenotype /// 2000017 // positive regulation of determination of dorsal identity // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004705 // JUN kinase activity // inferred from direct assay /// 0004705 // JUN kinase activity // inferred from electronic annotation /// 0004707 // MAP kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0035033 // histone deacetylase regulator activity // inferred from mutant phenotype /// 0042826 // histone deacetylase binding // inferred from physical interaction","chr10:49514681-49643430 (+) // 100.0 // q11.22"]
["11733562_a_at",112.8895,109.9494,109.222824,113.81345,100.9669,103.56366,0.04285431,0.0047826767,-0.0047831535,0.054614544,-0.11817455,-0.08153963,0.63279843,0.31470582,1.0443832,0.06265111,1.0443832,"up","KLHDC10",23008,"","","","chr7:129710343-129773593 (+) // 96.7 // q32.2"]
["11721326_at",13.956523,12.371479,12.741997,12.114812,13.806754,11.675708,0.15263486,-0.021286726,0.021286488,-0.051532745,0.13706946,-0.10479474,0.80752945,0.5595078,1.0405148,0.05729752,1.0405148,"up","C3orf14",57415,"","","","chr3:62304717-62319977 (+) // 97.09 // p14.2"]
["11762121_a_at",23.683372,23.333042,20.16985,19.748,21.278225,25.401302,0.08799839,0.06649828,-0.1436758,-0.17416954,-0.06649828,0.18902636,0.9582717,0.88107836,1.0145365,0.02082077,1.0145365,"up","DNMT3B",1789,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006306 // DNA methylation // non-traceable author statement /// 0006306 // DNA methylation // traceable author statement /// 0006306 // DNA methylation // inferred from electronic annotation /// 0006346 // methylation-dependent chromatin silencing // inferred from electronic annotation /// 0006349 // regulation of gene expression by genetic imprinting // inferred from electronic annotation /// 0010212 // response to ionizing radiation // inferred from electronic annotation /// 0010424 // DNA methylation on cytosine within a CG sequence // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from mutant phenotype /// 0031503 // protein complex localization // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0042493 // response to drug // inferred from electronic annotation /// 0043045 // DNA methylation involved in embryo development // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045814 // negative regulation of gene expression, epigenetic // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0046498 // S-adenosylhomocysteine metabolic process // inferred from electronic annotation /// 0046499 // S-adenosylmethioninamine metabolic process // inferred from electronic annotation /// 0051571 // positive regulation of histone H3-K4 methylation // inferred from mutant phenotype /// 0051573 // negative regulation of histone H3-K9 methylation // inferred from mutant phenotype /// 0071230 // cellular response to amino acid stimulus // inferred from electronic annotation /// 0090116 // C-5 methylation of cytosine // inferred from direct assay /// 0090116 // C-5 methylation of cytosine // non-traceable author statement /// 0090116 // C-5 methylation of cytosine // traceable author statement /// 0090116 // C-5 methylation of cytosine // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005720 // nuclear heterochromatin // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from mutant phenotype /// 0003886 // DNA (cytosine-5-)-methyltransferase activity // inferred from direct assay /// 0003886 // DNA (cytosine-5-)-methyltransferase activity // non-traceable author statement /// 0003886 // DNA (cytosine-5-)-methyltransferase activity // traceable author statement /// 0003886 // DNA (cytosine-5-)-methyltransferase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0009008 // DNA-methyltransferase activity // non-traceable author statement /// 0016740 // transferase activity // inferred from electronic annotation /// 0045322 // unmethylated CpG binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051718 // DNA (cytosine-5-)-methyltransferase activity, acting on CpG substrates // inferred from electronic annotation","chr20:31350451-31386319 (+) // 100.0 // q11.21"]
["11730260_a_at",8.186923,10.546995,8.71812,8.826946,9.399444,10.441303,-0.15392327,0.21151543,-0.06322765,-0.045330524,0.045330524,0.19698524,0.8477555,0.6324248,-1.0479285,-0.06754022,1.0479285,"down","PRKAR2B",5577,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0001932 // regulation of protein phosphorylation // inferred from electronic annotation /// 0006112 // energy reserve metabolic process // traceable author statement /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007173 // epidermal growth factor receptor signaling pathway // traceable author statement /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007612 // learning // inferred from electronic annotation /// 0008543 // fibroblast growth factor receptor signaling pathway // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0034199 // activation of protein kinase A activity // traceable author statement /// 0035556 // intracellular signal transduction // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045859 // regulation of protein kinase activity // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0050796 // regulation of insulin secretion // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0071377 // cellular response to glucagon stimulus // traceable author statement","0000267 // cell fraction // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from direct assay /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005626 // insoluble fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005952 // cAMP-dependent protein kinase complex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0008603 // cAMP-dependent protein kinase regulator activity // inferred from electronic annotation /// 0008603 // cAMP-dependent protein kinase regulator activity // traceable author statement /// 0016301 // kinase activity // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from electronic annotation /// 0030552 // cAMP binding // inferred from electronic annotation /// 0031625 // ubiquitin protein ligase binding // inferred from direct assay","chr7:106685093-106802256 (+) // 97.34 // q22.3"]
["11734327_a_at",15.380684,17.440409,14.717973,16.194454,14.453706,14.830031,0.026299,0.20761347,-0.037241697,0.1006794,-0.06338096,-0.026298761,0.7859732,0.5232969,1.0438325,0.06189028,1.0438325,"up","CHRM5",1133,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007197 // adenylate cyclase-inhibiting G-protein coupled acetylcholine receptor signaling pathway // traceable author statement /// 0007213 // G-protein coupled acetylcholine receptor signaling pathway // traceable author statement /// 0007213 // G-protein coupled acetylcholine receptor signaling pathway // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0015872 // dopamine transport // inferred from electronic annotation /// 0019226 // transmission of nerve impulse // inferred from electronic annotation /// 0060304 // regulation of phosphatidylinositol dephosphorylation // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation /// 0045211 // postsynaptic membrane // inferred from electronic annotation","0004435 // phosphatidylinositol phospholipase C activity // traceable author statement /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0016907 // G-protein coupled acetylcholine receptor activity // inferred from electronic annotation /// 0016907 // G-protein coupled acetylcholine receptor activity // traceable author statement","chr15:34260445-34357295 (+) // 91.3 // q14"]
["11752851_a_at",122.11943,107.74401,112.30968,116.65286,102.22143,96.98905,0.15074778,-0.029937267,0.029937267,0.08467674,-0.10584688,-0.18165064,0.60436034,0.28426164,1.0851212,0.11785613,1.0851212,"up","PPHLN1",51535,"0031424 // keratinization // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","","chr12:42719964-42835231 (+) // 59.36 // q12"]
["11747382_a_at",138.96423,130.90988,134.02728,141.39624,143.17946,141.39624,-0.012515068,-0.09865427,-0.06470251,0.012515068,0.03059578,0.012515068,0.22967286,0.040144842,-1.0549437,-0.07716598,1.0549437,"down","SERGEF",26297,"0007165 // signal transduction // traceable author statement /// 0050709 // negative regulation of protein secretion // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005087 // Ran guanyl-nucleotide exchange factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr11:17868108-18034500 (-) // 89.0 // p15.1"]
["11723973_at",317.21405,307.85324,328.8103,272.37848,259.85904,267.37122,0.13152885,0.08831501,0.18332767,-0.08831501,-0.1561985,-0.115083694,0.05154753,0.0016764348,1.1927207,0.2542562,1.1927207,"up","CHST12",55501,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0016051 // carbohydrate biosynthetic process // inferred from electronic annotation /// 0030206 // chondroitin sulfate biosynthetic process // inferred from direct assay /// 0030208 // dermatan sulfate biosynthetic process // inferred from direct assay","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030173 // integral to Golgi membrane // non-traceable author statement","0008146 // sulfotransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0047756 // chondroitin 4-sulfotransferase activity // inferred from direct assay /// 0047756 // chondroitin 4-sulfotransferase activity // inferred from electronic annotation /// 0050656 // 3'-phosphoadenosine 5'-phosphosulfate binding // non-traceable author statement","chr7:2472195-2474426 (+) // 80.02 // p22.3"]
["11747306_x_at",367.9916,410.602,398.8327,387.06262,386.1962,440.93958,-0.09450245,0.063565254,0.021608353,-0.021608353,-0.024841309,0.16640568,0.8374767,0.6141326,-1.0303217,-0.04309489,1.0303217,"down","C17orf81",23587,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr17:7155604-7162287 (+) // 98.31 // p13.1"]
["11729468_a_at",232.42415,275.73956,256.2262,223.41034,261.33603,312.83725,-0.15490198,0.09164429,-0.01424408,-0.21196651,0.01424408,0.2737503,0.9098311,0.7614426,-1.0361096,-0.051176574,1.0361096,"down","BZRAP1",9256,"","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0030156 // benzodiazepine receptor binding // inferred from physical interaction","chr17:56378591-56406156 (-) // 93.81 // q22"]
["11747774_a_at",17.395384,12.919992,13.786514,20.371883,14.965007,17.033438,0.12372327,-0.30537605,-0.21172357,0.35159802,-0.09338832,0.09338832,0.56635624,0.24703199,-1.187827,-0.24832472,1.187827,"down","SLC11A1",6556,"0000060 // protein import into nucleus, translocation // inferred from electronic annotation /// 0001818 // negative regulation of cytokine production // inferred from sequence or structural similarity /// 0001818 // negative regulation of cytokine production // inferred from electronic annotation /// 0001819 // positive regulation of cytokine production // inferred from sequence or structural similarity /// 0001819 // positive regulation of cytokine production // inferred from electronic annotation /// 0002309 // T cell proliferation involved in immune response // inferred from sequence or structural similarity /// 0002309 // T cell proliferation involved in immune response // inferred from electronic annotation /// 0002369 // T cell cytokine production // inferred from sequence or structural similarity /// 0002369 // T cell cytokine production // inferred from electronic annotation /// 0002606 // positive regulation of dendritic cell antigen processing and presentation // inferred from sequence or structural similarity /// 0002606 // positive regulation of dendritic cell antigen processing and presentation // inferred from electronic annotation /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from sequence or structural similarity /// 0002827 // positive regulation of T-helper 1 type immune response // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006826 // iron ion transport // inferred from mutant phenotype /// 0006826 // iron ion transport // inferred from electronic annotation /// 0006828 // manganese ion transport // inferred from sequence or structural similarity /// 0006828 // manganese ion transport // inferred from electronic annotation /// 0006876 // cellular cadmium ion homeostasis // inferred from genetic interaction /// 0006879 // cellular iron ion homeostasis // inferred from mutant phenotype /// 0006909 // phagocytosis // inferred from sequence or structural similarity /// 0006909 // phagocytosis // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from sequence or structural similarity /// 0006954 // inflammatory response // inferred from electronic annotation /// 0006955 // immune response // non-traceable author statement /// 0007035 // vacuolar acidification // inferred from sequence or structural similarity /// 0007035 // vacuolar acidification // inferred from electronic annotation /// 0009617 // response to bacterium // inferred from direct assay /// 0010628 // positive regulation of gene expression // inferred from sequence or structural similarity /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0015707 // nitrite transport // inferred from sequence or structural similarity /// 0015707 // nitrite transport // inferred from electronic annotation /// 0032147 // activation of protein kinase activity // inferred from sequence or structural similarity /// 0032147 // activation of protein kinase activity // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from sequence or structural similarity /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032623 // interleukin-2 production // inferred from sequence or structural similarity /// 0032623 // interleukin-2 production // inferred from electronic annotation /// 0032632 // interleukin-3 production // inferred from sequence or structural similarity /// 0032632 // interleukin-3 production // inferred from electronic annotation /// 0032729 // positive regulation of interferon-gamma production // inferred from sequence or structural similarity /// 0032729 // positive regulation of interferon-gamma production // inferred from electronic annotation /// 0034341 // response to interferon-gamma // inferred from sequence or structural similarity /// 0034341 // response to interferon-gamma // inferred from electronic annotation /// 0042060 // wound healing // inferred from sequence or structural similarity /// 0042060 // wound healing // inferred from electronic annotation /// 0042116 // macrophage activation // inferred from sequence or structural similarity /// 0042116 // macrophage activation // inferred from electronic annotation /// 0042742 // defense response to bacterium // inferred from sequence or structural similarity /// 0042742 // defense response to bacterium // inferred from electronic annotation /// 0042832 // defense response to protozoan // inferred from sequence or structural similarity /// 0042832 // defense response to protozoan // inferred from electronic annotation /// 0043091 // L-arginine import // inferred from sequence or structural similarity /// 0043091 // L-arginine import // inferred from electronic annotation /// 0045342 // MHC class II biosynthetic process // inferred from sequence or structural similarity /// 0045342 // MHC class II biosynthetic process // inferred from electronic annotation /// 0045730 // respiratory burst // inferred from sequence or structural similarity /// 0045730 // respiratory burst // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048002 // antigen processing and presentation of peptide antigen // inferred from sequence or structural similarity /// 0048002 // antigen processing and presentation of peptide antigen // inferred from electronic annotation /// 0048255 // mRNA stabilization // inferred from sequence or structural similarity /// 0048255 // mRNA stabilization // inferred from electronic annotation /// 0050766 // positive regulation of phagocytosis // inferred from sequence or structural similarity /// 0050766 // positive regulation of phagocytosis // inferred from electronic annotation /// 0050829 // defense response to Gram-negative bacterium // inferred from sequence or structural similarity /// 0050829 // defense response to Gram-negative bacterium // inferred from electronic annotation /// 0055072 // iron ion homeostasis // inferred from sequence or structural similarity /// 0055072 // iron ion homeostasis // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement /// 0060586 // multicellular organismal iron ion homeostasis // inferred from sequence or structural similarity /// 0060586 // multicellular organismal iron ion homeostasis // inferred from electronic annotation /// 0070574 // cadmium ion transmembrane transport // inferred from genetic interaction /// 0070839 // divalent metal ion export // inferred from sequence or structural similarity /// 0070839 // divalent metal ion export // inferred from electronic annotation /// 0071421 // manganese ion transmembrane transport // inferred from sequence or structural similarity /// 0071421 // manganese ion transmembrane transport // inferred from electronic annotation","0005764 // lysosome // inferred from sequence or structural similarity /// 0005764 // lysosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from sequence or structural similarity /// 0005770 // late endosome // inferred from electronic annotation /// 0005773 // vacuole // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from mutant phenotype /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0009279 // cell outer membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // inferred from direct assay /// 0030670 // phagocytic vesicle membrane // inferred from electronic annotation /// 0031902 // late endosome membrane // traceable author statement /// 0070821 // tertiary granule membrane // inferred from direct assay","0005215 // transporter activity // inferred from electronic annotation /// 0005384 // manganese ion transmembrane transporter activity // inferred from sequence or structural similarity /// 0005384 // manganese ion transmembrane transporter activity // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0046915 // transition metal ion transmembrane transporter activity // inferred from genetic interaction /// 0051139 // metal ion:hydrogen antiporter activity // inferred from genetic interaction","chr2:219246973-219252721 (+) // 84.15 // q35"]
["11722524_s_at",94.22287,84.473305,87.60958,96.389565,89.102036,91.15212,0.06420994,-0.09337139,-0.040778637,0.09700966,-0.01640892,0.01640892,0.69167805,0.38629243,-1.0393271,-0.055649836,1.0393271,"down","TMCO4",255104,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr1:20008705-20113611 (-) // 87.5 // p36.13"]
["11716997_x_at",612.4287,600.7025,574.5951,602.83545,611.65753,585.8047,0.025334358,-0.0025568008,-0.066661835,0.0025568008,0.023516655,-0.03878784,0.9122664,0.7673564,-1.0072278,-0.010389977,1.0072278,"down","TSPAN4",7106,"0006461 // protein complex assembly // traceable author statement","0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:842823-867116 (+) // 97.83 // p15.5"]
["11717079_a_at",571.0494,511.55038,506.38733,576.8046,447.12485,494.48578,0.16605663,0.007317543,-0.007317543,0.18052387,-0.18688107,-0.04162979,0.82217294,0.58531654,1.0506978,0.07134779,1.0506978,"up","VPS52",6293,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","","chr6:33218048-33239701 (-) // 97.61 // p21.32"]
["11750705_a_at",118.68259,83.430885,87.94647,103.67928,77.03885,76.51855,0.47043324,-0.03802204,0.03802252,0.27545214,-0.15301704,-0.16279411,0.7523628,0.4714703,1.1252645,0.17026418,1.1252645,"up","OSBP2",23762,"0006810 // transport // inferred from electronic annotation /// 0006869 // lipid transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation","0005543 // phospholipid binding // inferred from electronic annotation /// 0008289 // lipid binding // inferred from electronic annotation","chr22:31218502-31302701 (+) // 99.92 // q12.2"]
["11718627_at",53.224983,41.58185,49.695034,56.3628,45.609875,41.878914,0.16087961,-0.19527006,0.061877728,0.2435193,-0.061877728,-0.18499994,0.984089,0.9535274,1.0071523,0.010281889,1.0071523,"up","TRAK1",22906,"0006357 // regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0006493 // protein O-linked glycosylation // inferred from sequence or structural similarity /// 0006605 // protein targeting // inferred from sequence or structural similarity /// 0008333 // endosome to lysosome transport // inferred from direct assay","0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from direct assay /// 0005769 // early endosome // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0016740 // transferase activity // inferred from electronic annotation /// 0050811 // GABA receptor binding // inferred from electronic annotation","chr3:42132745-42267381 (+) // 98.06 // p22.1"]
["11727110_a_at",14.979477,17.539537,17.539537,17.974997,16.660734,18.854643,-0.22762346,0,0,0.03538084,-0.07415867,0.10430908,0.6622439,0.34786072,-1.0700797,-0.09771823,1.0700797,"down","WSCD2",9671,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:108523119-108644311 (+) // 98.65 // q23.3"]
["11742650_at",11.001414,10.77541,10.647629,11.156454,10.510485,11.97879,0.014973164,-0.014973164,-0.032183886,0.03516245,-0.05088663,0.13776636,0.71092105,0.41240475,-1.0362762,-0.051408608,1.0362762,"down","DPRX",503834,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation","chr19:54135309-54140263 (+) // 100.0 // q13.42"]
["11751513_a_at",14.972278,15.860338,18.46951,15.684,15.245793,16.954533,-0.0750649,0.008064985,0.22778702,-0.008064985,-0.048947096,0.10431242,0.8945602,0.727764,1.0265678,0.037828937,1.0265678,"up","NME9",347736,"0006165 // nucleoside diphosphate phosphorylation // inferred from electronic annotation /// 0006183 // GTP biosynthetic process // inferred from electronic annotation /// 0006228 // UTP biosynthetic process // inferred from electronic annotation /// 0006241 // CTP biosynthetic process // inferred from electronic annotation /// 0045454 // cell redox homeostasis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0004550 // nucleoside diphosphate kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation","chr3:137980932-138048686 (-) // 94.51 // q22.3"]
["11724629_at",555.3477,580.87585,600.4766,575.6349,597.2657,585.2233,-0.07021713,-0.005378723,0.042499542,-0.018454552,0.03476429,0.005378723,0.85148597,0.63961,-1.0127385,-0.018261654,1.0127385,"down","TUSC1",286319,"","","","chr9:25676388-25678856 (-) // 96.9 // p21.2"]
["11745357_x_at",188.05623,239.60272,198.95471,225.6545,208.72285,236.64262,-0.20668793,0.1427927,-0.12541246,0.056263447,-0.056263447,0.12485838,0.7199787,0.42514837,-1.0752872,-0.104722075,1.0752872,"down","AP1S1",1174,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0006892 // post-Golgi vesicle-mediated transport // traceable author statement /// 0006897 // endocytosis // inferred from electronic annotation /// 0006898 // receptor-mediated endocytosis // traceable author statement /// 0009615 // response to virus // inferred from expression pattern /// 0015031 // protein transport // inferred from electronic annotation /// 0016032 // viral reproduction // traceable author statement /// 0016044 // cellular membrane organization // traceable author statement /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0050690 // regulation of defense response to virus by virus // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0005765 // lysosomal membrane // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005905 // coated pit // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030117 // membrane coat // inferred from electronic annotation /// 0030121 // AP-1 adaptor complex // traceable author statement /// 0030130 // clathrin coat of trans-Golgi network vesicle // non-traceable author statement /// 0030659 // cytoplasmic vesicle membrane // traceable author statement /// 0030659 // cytoplasmic vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation","0008565 // protein transporter activity // inferred from electronic annotation","chr7:100799873-100804556 (+) // 94.28 // q22.1"]
["11729051_a_at",285.79453,249.92859,235.35591,308.39706,207.11856,205.70988,0.23679829,0.04333639,-0.04333639,0.34660912,-0.22772312,-0.23756838,0.83199424,0.60290056,1.0856007,0.1184936,1.0856007,"up","PPFIBP1",8496,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0015074 // DNA integration // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005886 // plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0008907 // integrase activity // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr12:27677044-27800910 (+) // 95.42 // p11.23"]
["11744232_a_at",712.7583,666.65717,675.28516,595.4763,582.3233,572.70667,0.17791843,0.08145046,0.10000229,-0.08145046,-0.113674164,-0.13769817,0.060277946,0.0023942774,1.1734296,0.2307313,1.1734296,"up","RFC5",5985,"0000075 // cell cycle checkpoint // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0000722 // telomere maintenance via recombination // traceable author statement /// 0000723 // telomere maintenance // traceable author statement /// 0006260 // DNA replication // non-traceable author statement /// 0006260 // DNA replication // traceable author statement /// 0006260 // DNA replication // inferred from electronic annotation /// 0006271 // DNA strand elongation involved in DNA replication // traceable author statement /// 0006281 // DNA repair // non-traceable author statement /// 0006281 // DNA repair // traceable author statement /// 0006283 // transcription-coupled nucleotide-excision repair // traceable author statement /// 0006289 // nucleotide-excision repair // traceable author statement /// 0006297 // nucleotide-excision repair, DNA gap filling // traceable author statement /// 0032201 // telomere maintenance via semi-conservative replication // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005663 // DNA replication factor C complex // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0019899 // enzyme binding // non-traceable author statement","chr12:118454507-118471352 (+) // 83.8 // q24.23"]
["11731587_a_at",27.49482,30.68566,26.099197,26.40609,28.361088,32.05197,-0.022376537,0.13602829,-0.09753084,-0.08066559,0.022376537,0.19887638,0.88944906,0.7173871,-1.0291754,-0.04148888,1.0291754,"down","SEPT4",5414,"0000910 // cytokinesis // traceable author statement /// 0006184 // GTP catabolic process // traceable author statement /// 0006915 // apoptotic process // non-traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007286 // spermatid development // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0030382 // sperm mitochondrion organization // inferred from electronic annotation /// 0031398 // positive regulation of protein ubiquitination // inferred from direct assay /// 0042981 // regulation of apoptotic process // non-traceable author statement /// 0043065 // positive regulation of apoptotic process // inferred from direct assay /// 0048240 // sperm capacitation // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // non-traceable author statement /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0009434 // microtubule-based flagellum // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // traceable author statement /// 0005198 // structural molecule activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0005525 // GTP binding // inferred from electronic annotation","chr17:56597616-56609454 (-) // 99.39 // q22"]
["11730944_a_at",16.619509,14.001268,15.701085,15.130458,14.224557,14.9854765,0.14236736,-0.104952574,0.060353994,0.0069453716,-0.08212638,-0.0069453716,0.7608999,0.48393908,1.0424405,0.059965085,1.0424405,"up","CCDC65",85478,"","","","chr12:49297892-49315354 (+) // 98.75 // q13.12"]
["11748495_a_at",65.20905,51.900246,53.325897,68.059204,57.00654,66.2206,0.096972466,-0.23235846,-0.19326353,0.15869045,-0.09697199,0.1191802,0.5836721,0.26384887,-1.124941,-0.16984932,1.124941,"down","OSR2",116039,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001656 // metanephros development // inferred from sequence or structural similarity /// 0001656 // metanephros development // inferred from electronic annotation /// 0001823 // mesonephros development // inferred from sequence or structural similarity /// 0001823 // mesonephros development // inferred from electronic annotation /// 0002062 // chondrocyte differentiation // inferred from sequence or structural similarity /// 0002062 // chondrocyte differentiation // inferred from electronic annotation /// 0008284 // positive regulation of cell proliferation // inferred from sequence or structural similarity /// 0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// 0009790 // embryo development // inferred from sequence or structural similarity /// 0009790 // embryo development // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from sequence or structural similarity /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from sequence or structural similarity /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030501 // positive regulation of bone mineralization // inferred from sequence or structural similarity /// 0030501 // positive regulation of bone mineralization // inferred from electronic annotation /// 0033687 // osteoblast proliferation // inferred from sequence or structural similarity /// 0033687 // osteoblast proliferation // inferred from electronic annotation /// 0035115 // embryonic forelimb morphogenesis // inferred from sequence or structural similarity /// 0035115 // embryonic forelimb morphogenesis // inferred from electronic annotation /// 0035116 // embryonic hindlimb morphogenesis // inferred from sequence or structural similarity /// 0035116 // embryonic hindlimb morphogenesis // inferred from electronic annotation /// 0036023 // embryonic skeletal limb joint morphogenesis // inferred from sequence or structural similarity /// 0036023 // embryonic skeletal limb joint morphogenesis // inferred from electronic annotation /// 0042474 // middle ear morphogenesis // inferred from sequence or structural similarity /// 0042474 // middle ear morphogenesis // inferred from electronic annotation /// 0042476 // odontogenesis // inferred from sequence or structural similarity /// 0042476 // odontogenesis // inferred from electronic annotation /// 0042733 // embryonic digit morphogenesis // inferred from sequence or structural similarity /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048704 // embryonic skeletal system morphogenesis // inferred from sequence or structural similarity /// 0048704 // embryonic skeletal system morphogenesis // inferred from electronic annotation /// 0048793 // pronephros development // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from sequence or structural similarity /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0060021 // palate development // inferred from sequence or structural similarity /// 0060021 // palate development // inferred from electronic annotation /// 0060272 // embryonic skeletal joint morphogenesis // inferred from sequence or structural similarity /// 0060272 // embryonic skeletal joint morphogenesis // inferred from electronic annotation /// 0060322 // head development // inferred from sequence or structural similarity /// 0060322 // head development // inferred from electronic annotation /// 0060349 // bone morphogenesis // inferred from sequence or structural similarity /// 0060349 // bone morphogenesis // inferred from electronic annotation /// 0061029 // eyelid development in camera-type eye // inferred from sequence or structural similarity /// 0061029 // eyelid development in camera-type eye // inferred from electronic annotation /// 0072498 // embryonic skeletal joint development // inferred from sequence or structural similarity /// 0072498 // embryonic skeletal joint development // inferred from electronic annotation /// 2000543 // positive regulation of gastrulation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from sequence or structural similarity /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr8:99956669-99963990 (+) // 99.94 // q22.2"]
["11716172_at",454.3498,374.723,345.14114,437.23337,382.86963,358.0652,0.26246452,-0.015514374,-0.13415241,0.20706463,0.015514374,-0.08111668,0.98304015,0.950576,-1.006645,-0.009554946,1.006645,"down","SYVN1",84447,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0006916 // anti-apoptosis // inferred from electronic annotation /// 0006950 // response to stress // inferred from electronic annotation /// 0006987 // activation of signaling protein activity involved in unfolded protein response // traceable author statement /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0030433 // ER-associated protein catabolic process // inferred from direct assay /// 0030968 // endoplasmic reticulum unfolded protein response // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0016881 // acid-amino acid ligase activity // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr11:64893931-64902003 (-) // 96.38 // q13.1"]
["11762329_s_at",8.058332,6.0248733,6.9413385,6.7168736,7.05716,8.004163,0.20333052,-0.2162199,-0.011936903,-0.05936098,0.011936903,0.1935997,0.88624316,0.7098378,-1.0403007,-0.057000637,1.0403007,"down","YME1L1",10730,"0006508 // proteolysis // inferred from electronic annotation /// 0006515 // misfolded or incompletely synthesized protein catabolic process // inferred from mutant phenotype /// 0006955 // immune response // non-traceable author statement /// 0006968 // cellular defense response // non-traceable author statement /// 0007005 // mitochondrion organization // inferred from mutant phenotype /// 0008283 // cell proliferation // inferred from mutant phenotype /// 0030163 // protein catabolic process // inferred from electronic annotation /// 0031295 // T cell costimulation // traceable author statement /// 0045768 // positive regulation of anti-apoptosis // inferred from mutant phenotype /// 0050776 // regulation of immune response // traceable author statement /// 0050852 // T cell receptor signaling pathway // traceable author statement","0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // non-traceable author statement /// 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0042287 // MHC protein binding // non-traceable author statement /// 0042605 // peptide antigen binding // non-traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr14:22465924-23019607 (+) // 99.04 // q11.2"]
["11734631_s_at",116.065025,125.31839,127.70567,123.26791,122.39626,138.60983,-0.0987649,0.011900425,0.039124966,-0.011900425,-0.022138119,0.15733194,0.7526144,0.47198576,-1.0403082,-0.057011053,1.0403082,"down","BAGE2 /// BAGE3 /// BAGE4 /// BAGE5 /// MLL3","58508 /// 85316 /// 85317 /// 85318 /// 85319","0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0016571 // histone methylation // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0051568 // histone H3-K4 methylation // inferred from direct assay /// 0051568 // histone H3-K4 methylation // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0035097 // histone methyltransferase complex // inferred from direct assay /// 0035097 // histone methyltransferase complex // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from direct assay /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr21:11020476-11058324 (-) // 81.44 // p11.1"]
["11745505_x_at",201.846,149.30975,170.67024,169.67644,139.08862,123.286736,0.34270763,-0.0922389,0.10066414,0.0922389,-0.19454241,-0.3685298,0.5249948,0.21082269,1.2091463,0.27398875,1.2091463,"up","ITSN1",6453,"0006897 // endocytosis // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0042327 // positive regulation of phosphorylation // inferred from electronic annotation /// 0043524 // negative regulation of neuron apoptotic process // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048488 // synaptic vesicle endocytosis // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 0005905 // coated pit // inferred from direct assay /// 0005905 // coated pit // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0019717 // synaptosome // inferred from electronic annotation /// 0030027 // lamellipodium // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // non-traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005509 // calcium ion binding // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0019209 // kinase activator activity // inferred from electronic annotation /// 0032947 // protein complex scaffold // inferred from direct assay /// 0070064 // proline-rich region binding // inferred from physical interaction","chr21:35014705-35209342 (+) // 96.89 // q22.11"]
["11752694_x_at",309.53427,320.63986,324.91913,290.66724,268.88593,229.79582,0.045365334,0.09622002,0.11534691,-0.045365334,-0.15773964,-0.3843813,0.25888288,0.050682917,1.215435,0.28147277,1.215435,"up","PRR11",55771,"","","","chr17:57233117-57281195 (+) // 73.42 // q22"]
["11716637_at",1377.5107,1430.0659,1437.8889,1415.7698,1418.8438,1423.1891,-0.04485798,0.009160042,0.017030716,-0.005334854,-0.0022058487,0.0022058487,0.93904114,0.8315188,-1.0030851,-0.004444059,1.0030851,"down","EMC7",56851,"","0005737 // cytoplasm // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0072546 // ER membrane protein complex // inferred from direct assay","0004180 // carboxypeptidase activity // inferred from electronic annotation /// 0017076 // purine nucleotide binding // non-traceable author statement /// 0030246 // carbohydrate binding // inferred from electronic annotation","chr15:34376217-34394149 (-) // 96.98 // q14"]
["11723720_at",27.010561,32.605843,32.082245,31.992819,25.440968,29.77729,-0.19245672,0.0791502,0.055794716,0.051767826,-0.2788267,-0.051767826,0.8319141,0.60262185,1.0524646,0.073771715,1.0524646,"up","SLAIN2",57606,"0007020 // microtubule nucleation // inferred from mutant phenotype /// 0031113 // regulation of microtubule polymerization // inferred from electronic annotation /// 0031116 // positive regulation of microtubule polymerization // inferred from mutant phenotype /// 0031122 // cytoplasmic microtubule organization // inferred from mutant phenotype /// 0031122 // cytoplasmic microtubule organization // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015630 // microtubule cytoskeleton // inferred from direct assay /// 0035371 // microtubule plus end // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr4:48342960-48428218 (+) // 98.62 // p11"]
["11740340_at",24.461485,24.668344,27.18264,29.404547,32.79066,29.78803,-0.20885038,-0.19670153,-0.056676865,0.056676865,0.2139225,0.07537031,0.15400791,0.01797923,-1.205306,-0.26939952,1.205306,"down","F2RL3",9002,"0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007200 // phospholipase C-activating G-protein coupled receptor signaling pathway // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0007596 // blood coagulation // inferred from electronic annotation /// 0007599 // hemostasis // inferred from electronic annotation /// 0009611 // response to wounding // traceable author statement /// 0030168 // platelet activation // traceable author statement /// 0051281 // positive regulation of release of sequestered calcium ion into cytosol // inferred from direct assay /// 0060155 // platelet dense granule organization // inferred by curator /// 0070493 // thrombin receptor signaling pathway // traceable author statement /// 0070493 // thrombin receptor signaling pathway // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0015057 // thrombin receptor activity // inferred from electronic annotation /// 0015057 // thrombin receptor activity // traceable author statement","chr19:16999670-17009516 (+) // 59.58 // p13.11"]
["11747057_at",37.070892,36.493282,46.446148,30.194372,45.222042,47.066284,-0.14336967,-0.16602564,0.18190241,-0.43937683,0.14336967,0.2010374,0.98828304,0.9651769,-1.0075427,-0.010841024,1.0075427,"down","LOC100130539",100130539,"","","","chr10:44788197-44790179 (+) // 71.22 // q11.21"]
["11757203_at",10.832351,9.868049,9.364592,10.26733,10.044593,10.71708,0.09310627,-0.041403294,-0.11695218,0.01582098,-0.01582098,0.077672005,0.7830434,0.51800233,-1.033573,-0.04764033,1.033573,"down","RP11-165H20.1",149620,"","","","chr1:111823145-111828730 (+) // 90.51 // p13.2"]
["11762970_at",23.063961,23.127457,20.726717,23.440678,29.195938,20.944973,-0.0019831657,0.0019831657,-0.15613174,0.021390915,0.3381443,-0.14101934,0.73958355,0.4519627,-1.0904189,-0.12488252,1.0904189,"down",0.021390915,0.3381443,-0.14101934,-0.0019831657,0.0019831657,-0.15613174]
["11748711_a_at",1043.6332,966.2209,979.75574,773.07996,676.3243,685.9746,0.27205753,0.16086769,0.18093681,-0.16086769,-0.35377026,-0.33333015,0.058389455,0.0022498665,1.4017963,0.48727676,1.4017963,"up","EIF4G3",8672,"0001934 // positive regulation of protein phosphorylation // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // inferred from electronic annotation /// 0006417 // regulation of translation // inferred from electronic annotation /// 0006446 // regulation of translational initiation // traceable author statement /// 0007128 // meiotic prophase I // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016070 // RNA metabolic process // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045727 // positive regulation of translation // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0016281 // eukaryotic translation initiation factor 4F complex // traceable author statement","0000339 // RNA cap binding // traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003743 // translation initiation factor activity // inferred from electronic annotation /// 0008135 // translation factor activity, nucleic acid binding // traceable author statement","chr1:21133740-21296462 (-) // 96.55 // p36.12"]
["11715289_s_at",44.59259,41.35358,34.79108,39.966736,43.24968,46.069656,0.07645321,-0.03233862,-0.28163338,-0.081551075,0.03233862,0.123466015,0.73142284,0.4404085,-1.0746926,-0.103924066,1.0746926,"down","AGRP",181,"0007218 // neuropeptide signaling pathway // inferred from direct assay /// 0007218 // neuropeptide signaling pathway // inferred from electronic annotation /// 0007218 // neuropeptide signaling pathway // traceable author statement /// 0007631 // feeding behavior // traceable author statement /// 0008343 // adult feeding behavior // inferred from electronic annotation /// 0009755 // hormone-mediated signaling pathway // inferred from electronic annotation /// 0060259 // regulation of feeding behavior // inferred from direct assay","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005796 // Golgi lumen // inferred from direct assay /// 0005796 // Golgi lumen // inferred from electronic annotation","0005102 // receptor binding // traceable author statement /// 0005184 // neuropeptide hormone activity // inferred from direct assay /// 0005184 // neuropeptide hormone activity // inferred from electronic annotation /// 0005184 // neuropeptide hormone activity // traceable author statement","chr16:67516473-67517304 (-) // 96.09 // q22.1"]
["11730392_at",63.69094,62.79323,64.58368,60.423843,68.38958,72.522224,-0.010040283,-0.030519485,0.01004076,-0.086010456,0.092648506,0.17729473,0.71186125,0.41393062,-1.050797,-0.07148397,1.050797,"down","GPR4",2828,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement","chr19:46093021-46105466 (-) // 84.3 // q13.32"]
["11724261_a_at",106.92901,91.19702,84.314835,89.72287,71.17174,71.7229,0.2979498,0.06835604,-0.044844627,0.044844627,-0.28932667,-0.2781973,0.41816944,0.13182983,1.2153571,0.28138024,1.2153571,"up","TRIO",7204,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007185 // transmembrane receptor protein tyrosine phosphatase signaling pathway // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr5:14143810-14509520 (+) // 97.2 // p15.2"]
["11750884_a_at",330.90945,302.4548,285.3756,295.70572,264.9133,271.7176,0.18792439,0.058207512,-0.025650024,0.025650024,-0.13299179,-0.096404076,0.43947476,0.14593996,1.102982,0.14140931,1.102982,"up","AKAP8L",26993,"0016310 // phosphorylation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016363 // nuclear matrix // inferred from direct assay /// 0016363 // nuclear matrix // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0017151 // DEAD/H-box RNA helicase binding // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:15490861-15529837 (-) // 98.5 // p13.12"]
["11754116_x_at",14.0992155,13.48302,13.73374,13.237479,13.095193,15.023511,0.05118084,-0.013290405,0.013290644,-0.03980565,-0.055397034,0.14278793,0.9949454,0.9864452,1.0008311,0.001198565,1.0008311,"up","S100B",6285,"0007409 // axonogenesis // traceable author statement /// 0007417 // central nervous system development // traceable author statement /// 0007611 // learning or memory // inferred from sequence or structural similarity /// 0007611 // learning or memory // inferred from electronic annotation /// 0007613 // memory // inferred from electronic annotation /// 0008283 // cell proliferation // traceable author statement /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from direct assay /// 0045087 // innate immune response // traceable author statement /// 0048168 // regulation of neuronal synaptic plasticity // inferred from electronic annotation","0001726 // ruffle // inferred from direct assay /// 0005576 // extracellular region // traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay","0005102 // receptor binding // inferred from electronic annotation /// 0005509 // calcium ion binding // non-traceable author statement /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from sequence or structural similarity /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from direct assay /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0044548 // S100 protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0048156 // tau protein binding // inferred from sequence or structural similarity /// 0048306 // calcium-dependent protein binding // inferred from direct assay /// 0050786 // RAGE receptor binding // inferred from physical interaction","chr21:48019287-48024977 (-) // 63.37 // q22.3"]
["11723098_a_at",7.7302074,8.713446,8.061458,7.0983734,8.09894,8.651264,-0.06387973,0.10885668,-0.0033462048,-0.18689847,0.0033462048,0.09852409,0.87609893,0.6887521,1.0296968,0.04221962,1.0296968,"up","VTCN1",79679,"0050868 // negative regulation of T cell activation // inferred from electronic annotation","0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005102 // receptor binding // inferred from electronic annotation","chr1:117686209-117753582 (-) // 87.14 // p13.1"]
["11748401_x_at",2806.2256,2638.4216,2902.5115,2508.389,2355.7007,2400.7224,0.12541294,0.03645706,0.17408371,-0.03645706,-0.12706184,-0.099749565,0.13919938,0.014541326,1.148492,0.19974078,1.148492,"up","TPM4",7171,"0006928 // cellular component movement // traceable author statement /// 0006936 // muscle contraction // traceable author statement /// 0006979 // response to oxidative stress // inferred from expression pattern /// 0030049 // muscle filament sliding // traceable author statement","0001725 // stress fiber // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005862 // muscle thin filament tropomyosin // traceable author statement","0003779 // actin binding // inferred from electronic annotation /// 0005509 // calcium ion binding // non-traceable author statement /// 0008307 // structural constituent of muscle // traceable author statement /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:16187304-16212764 (+) // 99.78 // p13.12"]
["11734319_a_at",15.016268,13.225757,13.73447,12.358899,13.225757,16.87035,0.15595055,-0.027225494,0.027225494,-0.12502551,-0.027225494,0.32391405,0.9910751,0.9732348,-1.003637,-0.0052375,1.003637,"down","SLC17A4",10050,"0006796 // phosphate-containing compound metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // traceable author statement /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005436 // sodium:phosphate symporter activity // traceable author statement /// 0015293 // symporter activity // inferred from electronic annotation","chr6:25754964-25781454 (+) // 86.64 // p22.2"]
["11718617_a_at",330.90768,272.68854,261.2357,282.99042,277.05908,262.6587,0.26770496,-0.011469841,-0.07337189,0.04202938,0.011469841,-0.06553459,0.8222384,0.5854963,1.0460604,0.06496622,1.0460604,"up","DNAJA4",55466,"0006457 // protein folding // inferred from electronic annotation /// 0009408 // response to heat // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation","0005524 // ATP binding // inferred from electronic annotation /// 0031072 // heat shock protein binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051082 // unfolded protein binding // inferred from electronic annotation","chr15:78556427-78574538 (+) // 99.27 // q25.1"]
["11737511_a_at",21.542645,23.154455,20.516655,21.340445,23.775284,16.891066,0.006802559,0.110897064,-0.0635972,-0.006802559,0.14906979,-0.34413242,0.8349092,0.6093412,1.0609249,0.085322514,1.0609249,"up","SP100",6672,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006978 // DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator // inferred from direct assay /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0032526 // response to retinoic acid // inferred from direct assay /// 0032897 // negative regulation of viral transcription // inferred from direct assay /// 0034097 // response to cytokine stimulus // inferred from direct assay /// 0034340 // response to type I interferon // inferred from direct assay /// 0034340 // response to type I interferon // inferred from mutant phenotype /// 0034341 // response to interferon-gamma // inferred from direct assay /// 0034341 // response to interferon-gamma // inferred from mutant phenotype /// 0043392 // negative regulation of DNA binding // inferred from direct assay /// 0043433 // negative regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0048384 // retinoic acid receptor signaling pathway // inferred by curator /// 0051091 // positive regulation of sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0051271 // negative regulation of cellular component movement // inferred from mutant phenotype /// 0060333 // interferon-gamma-mediated signaling pathway // inferred by curator /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon-mediated signaling pathway // inferred by curator","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from mutant phenotype /// 0005737 // cytoplasm // inferred from direct assay /// 0016605 // PML body // inferred from direct assay /// 0016605 // PML body // inferred from electronic annotation /// 0034399 // nuclear periphery // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019900 // kinase binding // inferred from physical interaction /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070087 // chromo shadow domain binding // inferred from physical interaction","chr2:231280870-231408300 (+) // 52.53 // q37.1"]
["11762783_at",19.916409,19.56079,25.739058,20.633541,19.304337,22.16788,-0.025516987,-0.051509857,0.3444848,0.025516987,-0.07054949,0.12899637,0.8744997,0.68529475,1.0433077,0.06116466,1.0433077,"up","RPL18A",6142,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0006412 // translation // non-traceable author statement /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006413 // translational initiation // traceable author statement /// 0006414 // translational elongation // traceable author statement /// 0006415 // translational termination // traceable author statement /// 0006614 // SRP-dependent cotranslational protein targeting to membrane // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0019058 // viral infectious cycle // traceable author statement /// 0019083 // viral transcription // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005829 // cytosol // traceable author statement /// 0005840 // ribosome // inferred from electronic annotation /// 0022625 // cytosolic large ribosomal subunit // inferred from direct assay /// 0022625 // cytosolic large ribosomal subunit // traceable author statement /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003723 // RNA binding // traceable author statement /// 0003735 // structural constituent of ribosome // non-traceable author statement /// 0003735 // structural constituent of ribosome // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // traceable author statement","chr19:17970729-17974962 (+) // 99.78 // p13.11"]
["11738568_at",33.848743,29.934744,32.27958,27.921854,33.366623,31.640202,0.08291197,-0.09436941,0.014431477,-0.19479561,0.06221533,-0.014431477,0.83835864,0.6157759,1.0352615,0.049995244,1.0352615,"up","KRTAP5-3",387266,"","0005882 // intermediate filament // inferred from electronic annotation /// 0045095 // keratin filament // inferred from electronic annotation","","chr11:1628310-1629693 (-) // 85.36 // p15.5"]
["11753154_a_at",16.144394,13.809043,15.560522,15.231487,14.184287,15.971677,0.06855965,-0.15686011,0.015416861,-0.015416861,-0.1181798,0.053042173,0.9920215,0.9772525,1.001774,0.0025570064,1.001774,"up","LHFPL1",340596,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chrX:111874276-111923274 (-) // 100.0 // q23"]
["11753258_s_at",461.2269,459.82837,422.073,356.703,315.3093,371.31308,0.22041225,0.21603107,0.09242821,-0.15034103,-0.32829666,-0.09242821,0.122568026,0.0112688495,1.2893517,0.36664584,1.2893517,"up","EGFL8 /// PPT2 /// PPT2-EGFL8","100532746 /// 80864 /// 9374","0001701 // in utero embryonic development // inferred from sequence or structural similarity /// 0006464 // cellular protein modification process // non-traceable author statement /// 0006464 // cellular protein modification process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005764 // lysosome // non-traceable author statement /// 0005764 // lysosome // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0016021 // integral to membrane // non-traceable author statement","0005509 // calcium ion binding // inferred from electronic annotation /// 0008474 // palmitoyl-(protein) hydrolase activity // non-traceable author statement /// 0008474 // palmitoyl-(protein) hydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016790 // thiolester hydrolase activity // non-traceable author statement","chr6:32121846-32134009 (+) // 99.62 // p21.32"]
["11728877_s_at",83.31155,63.25337,73.41664,74.88956,66.52771,62.72301,0.25348473,-0.14388847,0.07107592,0.099732876,-0.07107592,-0.1560359,0.76902616,0.49603194,1.0737691,0.10268378,1.0737691,"up","ARID1B",57492,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0048096 // chromatin-mediated maintenance of transcription // non-traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0016514 // SWI/SNF complex // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003713 // transcription coactivator activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction","chr6:157099085-157530396 (+) // 91.62 // q25.3"]
["11759126_a_at",707.82874,714.06934,706.0726,890.1637,951.46686,904.8478,-0.1716671,-0.15900326,-0.175251,0.15900326,0.25508595,0.18260765,0.024122445,0.00023317721,-1.2901505,-0.3675394,1.2901505,"down","THRA",7067,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0006366 // transcription from RNA polymerase II promoter // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0007623 // circadian rhythm // inferred from electronic annotation /// 0009755 // hormone-mediated signaling pathway // inferred from direct assay /// 0010467 // gene expression // traceable author statement /// 0010871 // negative regulation of receptor biosynthetic process // inferred from mutant phenotype /// 0017055 // negative regulation of RNA polymerase II transcriptional preinitiation complex assembly // inferred from direct assay /// 0030522 // intracellular receptor mediated signaling pathway // traceable author statement /// 0034144 // negative regulation of toll-like receptor 4 signaling pathway // inferred from mutant phenotype /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // traceable author statement /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0071222 // cellular response to lipopolysaccharide // inferred from mutant phenotype /// 2000143 // negative regulation of transcription initiation, DNA-dependent // inferred from direct assay /// 2000189 // positive regulation of cholesterol homeostasis // inferred from direct assay","0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // traceable author statement /// 0003714 // transcription corepressor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // traceable author statement /// 0004887 // thyroid hormone receptor activity // inferred from direct assay /// 0004887 // thyroid hormone receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0017025 // TBP-class protein binding // inferred from direct assay /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070324 // thyroid hormone binding // inferred from direct assay /// 0070324 // thyroid hormone binding // inferred from physical interaction","chr17:38219062-38249110 (+) // 97.76 // q21.1"]
["11726358_a_at",294.87378,240.38937,236.37935,280.6185,284.13065,287.41513,0.06251526,-0.23220873,-0.2564783,-0.008972168,0.008972168,0.025553703,0.53307825,0.21761617,-1.1100119,-0.15057519,1.1100119,"down","MLL5",55904,"0002446 // neutrophil mediated immunity // inferred from sequence or structural similarity /// 0002446 // neutrophil mediated immunity // inferred from electronic annotation /// 0006306 // DNA methylation // inferred from sequence or structural similarity /// 0006306 // DNA methylation // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0030218 // erythrocyte differentiation // inferred from sequence or structural similarity /// 0030218 // erythrocyte differentiation // inferred from electronic annotation /// 0030854 // positive regulation of granulocyte differentiation // inferred from mutant phenotype /// 0032259 // methylation // inferred from electronic annotation /// 0034968 // histone lysine methylation // inferred from electronic annotation /// 0042119 // neutrophil activation // inferred from sequence or structural similarity /// 0042119 // neutrophil activation // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0048384 // retinoic acid receptor signaling pathway // inferred from mutant phenotype /// 0051568 // histone H3-K4 methylation // inferred from direct assay /// 0071300 // cellular response to retinoic acid // inferred from direct assay","0005634 // nucleus // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation /// 0070688 // MLL5-L complex // inferred from direct assay","0003713 // transcription coactivator activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0018024 // histone-lysine N-methyltransferase activity // inferred from electronic annotation /// 0019899 // enzyme binding // inferred from physical interaction /// 0042800 // histone methyltransferase activity (H3-K4 specific) // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:104654630-104754808 (+) // 99.4 // q22.3"]
["11731654_at",53.145985,38.97822,44.304924,34.453503,37.09201,30.732735,0.48307228,0.035779476,0.22057867,-0.14223766,-0.035779953,-0.30711222,0.26928654,0.05480522,1.327017,0.4081868,1.327017,"up","ARL15",54622,"0007264 // small GTPase mediated signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electronic annotation","chr5:53180213-53606426 (-) // 90.25 // q11.2"]
["11740827_at",17.270079,16.390633,17.271648,15.747959,16.863827,16.210209,0.05487299,-0.020530224,0.05500412,-0.07823682,0.020530224,-0.036499023,0.49056214,0.18364848,1.0433217,0.06118411,1.0433217,"up","HES3",390992,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0021555 // midbrain-hindbrain boundary morphogenesis // inferred from electronic annotation /// 0021557 // oculomotor nerve development // inferred from electronic annotation /// 0021558 // trochlear nerve development // inferred from electronic annotation /// 0021575 // hindbrain morphogenesis // inferred from electronic annotation /// 0021915 // neural tube development // inferred from electronic annotation /// 0030901 // midbrain development // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0060164 // regulation of timing of neuron differentiation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // inferred from electronic annotation /// 0008134 // transcription factor binding // non-traceable author statement","chr1:6304253-6305638 (+) // 96.84 // p36.31"]
["11726673_s_at",10.2549,11.242013,12.597667,12.1136465,13.377642,13.864393,-0.2685814,-0.13599443,0.028261662,-0.028261662,0.11492896,0.1664896,0.3869332,0.113196425,-1.1565468,-0.20982368,1.1565468,"down","ASCL1",429,"0001764 // neuron migration // inferred from electronic annotation /// 0003359 // noradrenergic neuron fate commitment // inferred from mutant phenotype /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0007219 // Notch signaling pathway // inferred from direct assay /// 0007219 // Notch signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007389 // pattern specification process // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007400 // neuroblast fate determination // inferred from electronic annotation /// 0007405 // neuroblast proliferation // inferred from electronic annotation /// 0008593 // regulation of Notch signaling pathway // inferred from electronic annotation /// 0010001 // glial cell differentiation // inferred from electronic annotation /// 0010226 // response to lithium ion // inferred from electronic annotation /// 0010468 // regulation of gene expression // inferred from electronic annotation /// 0014003 // oligodendrocyte development // inferred from electronic annotation /// 0021527 // spinal cord association neuron differentiation // inferred from electronic annotation /// 0021530 // spinal cord oligodendrocyte cell fate specification // inferred from electronic annotation /// 0021750 // vestibular nucleus development // inferred from electronic annotation /// 0021779 // oligodendrocyte cell fate commitment // inferred from electronic annotation /// 0021879 // forebrain neuron differentiation // inferred from electronic annotation /// 0021892 // cerebral cortex GABAergic interneuron differentiation // inferred from expression pattern /// 0021954 // central nervous system neuron development // inferred from electronic annotation /// 0021987 // cerebral cortex development // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from direct assay /// 0022008 // neurogenesis // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030182 // neuron differentiation // inferred from electronic annotation /// 0032526 // response to retinoic acid // inferred from expression pattern /// 0032526 // response to retinoic acid // inferred from electronic annotation /// 0042127 // regulation of cell proliferation // inferred from electronic annotation /// 0043066 // negative regulation of apoptotic process // inferred from mutant phenotype /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0045665 // negative regulation of neuron differentiation // inferred from direct assay /// 0045665 // negative regulation of neuron differentiation // inferred from electronic annotation /// 0045666 // positive regulation of neuron differentiation // inferred from sequence or structural similarity /// 0045666 // positive regulation of neuron differentiation // inferred from electronic annotation /// 0045747 // positive regulation of Notch signaling pathway // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048485 // sympathetic nervous system development // non-traceable author statement /// 0048663 // neuron fate commitment // inferred from electronic annotation /// 0048665 // neuron fate specification // inferred from electronic annotation /// 0048666 // neuron development // inferred from electronic annotation /// 0048709 // oligodendrocyte differentiation // inferred from electronic annotation /// 0050769 // positive regulation of neurogenesis // inferred from electronic annotation /// 0051593 // response to folic acid // inferred from electronic annotation /// 0060163 // subpallium neuron fate commitment // inferred from electronic annotation /// 0060165 // regulation of timing of subpallium neuron differentiation // inferred from electronic annotation /// 0060166 // olfactory pit development // inferred from electronic annotation /// 0060487 // lung epithelial cell differentiation // non-traceable author statement /// 0061100 // lung neuroendocrine cell differentiation // inferred from electronic annotation /// 0061102 // stomach neuroendocrine cell differentiation // inferred from electronic annotation /// 0061103 // carotid body glomus cell differentiation // inferred from electronic annotation /// 0061104 // adrenal chromaffin cell differentiation // inferred from electronic annotation /// 0070849 // response to epidermal growth factor stimulus // inferred from electronic annotation /// 0071259 // cellular response to magnetism // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0000989 // transcription factor binding transcription factor activity // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from sequence or structural similarity /// 0003677 // DNA binding // inferred from electronic annotation /// 0003690 // double-stranded DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043425 // bHLH transcription factor binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0070888 // E-box binding // inferred from direct assay","chr12:103351421-103354291 (+) // 93.85 // q23.2"]
["11726507_a_at",107.93263,114.17731,99.493866,83.82177,80.89672,84.89227,0.23193836,0.31308365,0.11448765,-0.13279533,-0.18403912,-0.11448765,0.07621389,0.0040466418,1.2866418,0.3636105,1.2866418,"up","CDKN2B",1030,"0000079 // regulation of cyclin-dependent protein kinase activity // inferred from direct assay /// 0000080 // G1 phase of mitotic cell cycle // traceable author statement /// 0000086 // G2/M transition of mitotic cell cycle // inferred from mutant phenotype /// 0000278 // mitotic cell cycle // traceable author statement /// 0007049 // cell cycle // inferred from electronic annotation /// 0007050 // cell cycle arrest // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from mutant phenotype /// 0008285 // negative regulation of cell proliferation // inferred from electronic annotation /// 0014070 // response to organic cyclic compound // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0030219 // megakaryocyte differentiation // inferred from expression pattern /// 0030511 // positive regulation of transforming growth factor beta receptor signaling pathway // inferred from mutant phenotype /// 0030858 // positive regulation of epithelial cell differentiation // inferred from electronic annotation /// 0031575 // mitotic cell cycle G1/S transition checkpoint // inferred from mutant phenotype /// 0031668 // cellular response to extracellular stimulus // inferred from mutant phenotype /// 0031670 // cellular response to nutrient // inferred from mutant phenotype /// 0034097 // response to cytokine stimulus // inferred from electronic annotation /// 0042326 // negative regulation of phosphorylation // inferred from direct assay /// 0050680 // negative regulation of epithelial cell proliferation // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004861 // cyclin-dependent protein kinase inhibitor activity // inferred from direct assay /// 0004861 // cyclin-dependent protein kinase inhibitor activity // non-traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016301 // kinase activity // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction","chr9:22002897-22009312 (-) // 92.18 // p21.3"]
["11754200_a_at",69.222275,73.739235,70.17251,65.76052,66.92351,70.368835,-0.009834766,0.08136177,0.009834766,-0.08384895,-0.058557987,0.013865471,0.45529512,0.15764576,1.0496932,0.06996776,1.0496932,"up","CREBBP",1387,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0001666 // response to hypoxia // traceable author statement /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from direct assay /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0006461 // protein complex assembly // traceable author statement /// 0007165 // signal transduction // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007219 // Notch signaling pathway // traceable author statement /// 0008283 // cell proliferation // inferred from electronic annotation /// 0008589 // regulation of smoothened signaling pathway // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0016573 // histone acetylation // inferred from direct assay /// 0016573 // histone acetylation // inferred from electronic annotation /// 0018076 // N-terminal peptidyl-lysine acetylation // inferred from direct assay /// 0030718 // germ-line stem cell maintenance // inferred from electronic annotation /// 0033261 // regulation of S phase // inferred from electronic annotation /// 0042592 // homeostatic process // non-traceable author statement /// 0042733 // embryonic digit morphogenesis // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0000123 // histone acetyltransferase complex // inferred from electronic annotation /// 0000790 // nuclear chromatin // inferred from direct assay /// 0000940 // condensed chromosome outer kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0005667 // transcription factor complex // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0016604 // nuclear body // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation","0000987 // core promoter proximal region sequence-specific DNA binding // inferred from direct assay /// 0001078 // RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0001085 // RNA polymerase II transcription factor binding // inferred from physical interaction /// 0001102 // RNA polymerase II activating transcription factor binding // traceable author statement /// 0001105 // RNA polymerase II transcription coactivator activity // traceable author statement /// 0001191 // RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription // inferred from direct assay /// 0002039 // p53 binding // inferred from physical interaction /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003712 // transcription cofactor activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from direct assay /// 0003713 // transcription coactivator activity // inferred from electronic annotation /// 0003713 // transcription coactivator activity // inferred from physical interaction /// 0003713 // transcription coactivator activity // traceable author statement /// 0004402 // histone acetyltransferase activity // inferred from direct assay /// 0004402 // histone acetyltransferase activity // inferred from electronic annotation /// 0004871 // signal transducer activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008134 // transcription factor binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016407 // acetyltransferase activity // inferred from direct assay /// 0016407 // acetyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0042975 // peroxisome proliferator activated receptor binding // inferred from electronic annotation /// 0043426 // MRF binding // inferred from direct assay /// 0046332 // SMAD binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr16:3776568-3930711 (-) // 96.55 // p13.3"]
["11734372_at",74.938385,89.9535,99.49781,82.95925,86.72288,100.1987,-0.23709106,0.0263834,0.1718688,-0.09039259,-0.0263834,0.18199587,0.9355929,0.8229462,-1.0243341,-0.03468631,1.0243341,"down","MBLAC1",255374,"","","0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:99724319-99726123 (+) // 90.38 // q22.1"]
["11749484_a_at",9.31379,8.262296,9.70226,8.863384,8.139994,10.0468645,0.035755396,-0.13707042,0.09470773,-0.035755396,-0.15858555,0.1450603,0.9659573,0.90532684,1.0099084,0.0142244985,1.0099084,"up","AXDND1",126859,"","","","chr1:179334875-179460786 (+) // 94.59 // q25.2"]
["11726396_x_at",111.31343,109.37495,128.12393,167.57646,194.13608,178.36005,-0.3965521,-0.4218974,-0.19364023,0.19364023,0.40588856,0.28361225,0.06334717,0.00264187,-1.5494365,-0.63174355,1.5494365,"down","KAL1",3730,"0006928 // cellular component movement // traceable author statement /// 0006935 // chemotaxis // traceable author statement /// 0006935 // chemotaxis // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007155 // cell adhesion // traceable author statement /// 0007411 // axon guidance // traceable author statement /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // traceable author statement /// 0005615 // extracellular space // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005201 // extracellular matrix structural constituent // traceable author statement /// 0008201 // heparin binding // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation","chrX:8496915-8700228 (-) // 92.89 // p22.31"]
["11730793_a_at",10.923588,9.752256,12.682836,11.277209,11.980277,14.592333,-0.08958888,-0.2532277,0.12584162,-0.043625593,0.04362583,0.32817483,0.6298964,0.3115115,-1.1342328,-0.18171673,1.1342328,"down","MRPL4",51073,"0006412 // translation // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation","0003735 // structural constituent of ribosome // inferred from electronic annotation","chr19:10362635-10370733 (+) // 78.28 // p13.2"]
["11720741_a_at",36.785847,45.263256,40.008183,38.24132,42.35695,36.37107,-0.088562965,0.2106266,0.03258133,-0.03258133,0.11488485,-0.104922295,0.8375759,0.61439663,1.0418069,0.059087947,1.0418069,"up","ZNF605",100289635,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:133497860-133532892 (-) // 66.82 // q24.33"]
["11762500_at",21.761406,17.194283,17.95904,20.087301,15.718223,17.393332,0.30014944,-0.039693356,0.023087978,0.18466139,-0.16918397,-0.023087978,0.79814917,0.54368883,1.0695853,0.097051576,1.0695853,"up","WWC1",23286,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016477 // cell migration // inferred from direct assay /// 0035329 // hippo signaling cascade // traceable author statement /// 0035330 // regulation of hippo signaling cascade // inferred from mutant phenotype /// 0043410 // positive regulation of MAPK cascade // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0032587 // ruffle membrane // inferred from direct assay /// 0032587 // ruffle membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0003713 // transcription coactivator activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr5:167841076-167843527 (+) // 66.93 // q34"]
["11756966_a_at",9.372712,10.102085,10.557502,10.350854,10.245062,10.531826,-0.13580084,-0.027686357,0.03592944,0.0074105263,-0.0074105263,0.032416582,0.6704032,0.35858688,-1.0376536,-0.05332486,1.0376536,"down","FAM194A",131831,"","","","chr3:150377676-150400106 (-) // 73.93 // q25.1"]
["11722595_a_at",605.27203,560.2462,592.23883,574.4261,561.5068,538.8896,0.09187126,-0.019651413,0.060466766,0.01640892,-0.01640892,-0.075722694,0.48524427,0.17963766,1.049331,0.069469765,1.049331,"up","AKAP13",11214,"0006915 // apoptotic process // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005624 // membrane fraction // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0004691 // cAMP-dependent protein kinase activity // non-traceable author statement /// 0004871 // signal transducer activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:85923832-86292586 (+) // 98.27 // q25.3"]
["11742364_at",16.237734,16.069597,16.554066,15.760334,16.993433,15.760334,0.007508278,-0.007508278,0.035343647,-0.03554368,0.073135376,-0.03554368,0.91987646,0.7865997,1.0077226,0.0110985795,1.0077226,"up","OR5AR1",219493,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:56431137-56432163 (+) // 100.0 // q12.1"]
["11718080_a_at",239.42041,271.72784,272.37183,196.29251,205.27371,209.95563,0.094730854,0.2773471,0.2807622,-0.19181013,-0.1272664,-0.094730854,0.09352109,0.0063053803,1.2794726,0.35554925,1.2794726,"up","BCL2L11",10018,"0001701 // in utero embryonic development // inferred from electronic annotation /// 0001776 // leukocyte homeostasis // inferred from electronic annotation /// 0001782 // B cell homeostasis // inferred from electronic annotation /// 0001783 // B cell apoptotic process // inferred from electronic annotation /// 0001822 // kidney development // inferred from electronic annotation /// 0002260 // lymphocyte homeostasis // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from direct assay /// 0006917 // induction of apoptosis // traceable author statement /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // inferred from direct assay /// 0007160 // cell-matrix adhesion // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0008584 // male gonad development // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0008629 // induction of apoptosis by intracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0030879 // mammary gland development // inferred from electronic annotation /// 0032464 // positive regulation of protein homooligomerization // inferred from direct assay /// 0035148 // tube formation // inferred from electronic annotation /// 0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043029 // T cell homeostasis // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043525 // positive regulation of neuron apoptotic process // inferred from electronic annotation /// 0043583 // ear development // inferred from electronic annotation /// 0045787 // positive regulation of cell cycle // inferred from electronic annotation /// 0046620 // regulation of organ growth // inferred from electronic annotation /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0048066 // developmental pigmentation // inferred from electronic annotation /// 0048070 // regulation of developmental pigmentation // inferred from electronic annotation /// 0048536 // spleen development // inferred from electronic annotation /// 0048538 // thymus development // inferred from electronic annotation /// 0048563 // post-embryonic organ morphogenesis // inferred from electronic annotation /// 0060154 // cellular process regulating host cell cycle in response to virus // inferred from electronic annotation /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from genetic interaction /// 0090200 // positive regulation of release of cytochrome c from mitochondria // inferred from mutant phenotype /// 2001244 // positive regulation of intrinsic apoptotic signaling pathway // inferred from mutant phenotype","0000300 // peripheral to membrane of membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005741 // mitochondrial outer membrane // traceable author statement /// 0005829 // cytosol // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005874 // microtubule // inferred from direct assay /// 0005886 // plasma membrane // traceable author statement /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0097140 // BIM-BCL-xl complex // inferred from direct assay /// 0097141 // BIM-BCL-2 complex // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008017 // microtubule binding // inferred from direct assay /// 0008017 // microtubule binding // inferred from electronic annotation","chr2:111878490-111926021 (+) // 97.66 // q13"]
["11728554_at",42.82693,64.00334,56.692825,48.55557,58.28417,51.904964,-0.34100103,0.23862743,0.06364679,-0.15988255,0.10358477,-0.06364679,0.9619123,0.89252687,1.0189425,0.027072607,1.0189425,"up","ATP6V1E2 /// FLJ41757","440862 /// 90423","0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // inferred from electronic annotation /// 0033572 // transferrin transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0001669 // acrosomal vesicle // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0033178 // proton-transporting two-sector ATPase complex, catalytic domain // inferred from electronic annotation","0008553 // hydrogen-exporting ATPase activity, phosphorylative mechanism // inferred from electronic annotation /// 0046961 // proton-transporting ATPase activity, rotational mechanism // inferred from electronic annotation","chr2:46738985-46747176 (-) // 68.68 // p21"]
["11737957_a_at",102.22285,135.4447,126.724434,106.13347,116.91163,125.34034,-0.24391699,0.16206932,0.066060066,-0.18975449,-0.050216198,0.050216198,0.8824746,0.7017276,1.0410136,0.057988912,1.0410136,"up","DUSP15",128853,"0006470 // protein dephosphorylation // not recorded /// 0006470 // protein dephosphorylation // inferred from electronic annotation /// 0016311 // dephosphorylation // inferred from electronic annotation /// 0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // not recorded /// 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016791 // phosphatase activity // inferred from electronic annotation","chr20:30448879-30458547 (-) // 96.85 // q11.21"]
["11721231_a_at",80.850136,70.103424,82.64816,97.056175,83.556206,82.74634,-0.03258896,-0.23835373,-0.0008559227,0.2309804,0.014907837,0.0008559227,0.48067823,0.17604919,-1.1272813,-0.17284757,1.1272813,"down","METTL21D",79609,"0032259 // methylation // inferred from electronic annotation","","0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr14:50575354-50583318 (-) // 98.2 // q21.3"]
["11755527_x_at",312.88977,310.33145,305.73862,342.4221,305.53052,300.9857,0.022600174,0.010755539,-0.010755539,0.1527214,-0.0117378235,-0.033359528,0.861622,0.65901566,-1.0198389,-0.028341314,1.0198389,"down","PRPSAP2",5636,"0006139 // nucleobase-containing compound metabolic process // traceable author statement /// 0009165 // nucleotide biosynthetic process // inferred from electronic annotation /// 0043086 // negative regulation of catalytic activity // traceable author statement","0043234 // protein complex // inferred from electronic annotation","0000287 // magnesium ion binding // inferred from electronic annotation /// 0004749 // ribose phosphate diphosphokinase activity // inferred from electronic annotation /// 0004857 // enzyme inhibitor activity // traceable author statement","chr17:18759611-18834524 (+) // 95.54 // p11.2"]
["11729333_at",47.86244,57.461983,51.687717,41.428986,38.71092,50.95107,-0.045109272,0.21860456,0.06581831,-0.25336266,-0.35126257,0.045109272,0.41990092,0.13323237,1.2026998,0.26627657,1.2026998,"up","PADI1",29943,"0006464 // cellular protein modification process // inferred from electronic annotation /// 0018101 // peptidyl-citrulline biosynthetic process from peptidyl-arginine // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0004668 // protein-arginine deiminase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr1:17531289-17572502 (+) // 99.31 // p36.13"]
["11763951_at",100.562355,88.78038,82.210884,69.53756,84.08379,103.149796,0.21898413,0.039206505,-0.07170439,-0.31324196,-0.03920698,0.25563478,0.8499314,0.6362742,1.067646,0.094433405,1.067646,"up","LINC00235",64493,"","","","chr16:576846-577407 (+) // 100.0 // p13.3"]
["11726044_a_at",54.787178,58.27658,56.151722,62.03813,55.445496,61.410664,-0.062285423,0.026792526,-0.026793003,0.11703205,-0.045053482,0.10236502,0.563931,0.2445809,-1.0561953,-0.07887657,1.0561953,"down","AGER",177,"0006954 // inflammatory response // inferred from electronic annotation /// 0006954 // inflammatory response // traceable author statement /// 0007166 // cell surface receptor signaling pathway // traceable author statement /// 0007259 // JAK-STAT cascade // inferred from electronic annotation /// 0007420 // brain development // inferred from electronic annotation /// 0009611 // response to wounding // traceable author statement /// 0010763 // positive regulation of fibroblast migration // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0030335 // positive regulation of cell migration // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from genetic interaction /// 0031175 // neuron projection development // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0045087 // innate immune response // traceable author statement /// 0048661 // positive regulation of smooth muscle cell proliferation // inferred from electronic annotation /// 0050729 // positive regulation of inflammatory response // inferred from electronic annotation /// 0050930 // induction of positive chemotaxis // inferred from electronic annotation /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from direct assay /// 0055074 // calcium ion homeostasis // inferred from electronic annotation /// 0055093 // response to hyperoxia // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // non-traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009925 // basal plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0043025 // neuronal cell body // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0004872 // receptor activity // traceable author statement /// 0004888 // transmembrane signaling receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0044548 // S100 protein binding // inferred from physical interaction /// 0050785 // advanced glycation end-product receptor activity // inferred from electronic annotation","chr6:32148746-32152517 (-) // 88.71 // p21.32"]
["11752814_s_at",418.24603,376.86084,333.63147,374.72375,327.86356,347.63788,0.21264553,0.062325478,-0.113451004,0.054121017,-0.13861084,-0.054121017,0.7109506,0.41260326,1.0718058,0.10004357,1.0718058,"up","TNFRSF1A",7132,"0001666 // response to hypoxia // inferred from electronic annotation /// 0006693 // prostaglandin metabolic process // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0006915 // apoptotic process // inferred from electronic annotation /// 0006952 // defense response // inferred from electronic annotation /// 0006954 // inflammatory response // inferred from sequence or structural similarity /// 0006954 // inflammatory response // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0009611 // response to wounding // inferred from electronic annotation /// 0009812 // flavonoid metabolic process // inferred from electronic annotation /// 0010628 // positive regulation of gene expression // inferred from electronic annotation /// 0010629 // negative regulation of gene expression // inferred from electronic annotation /// 0016101 // diterpenoid metabolic process // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // inferred from sequence or structural similarity /// 0019221 // cytokine-mediated signaling pathway // inferred from electronic annotation /// 0032496 // response to lipopolysaccharide // inferred from electronic annotation /// 0032715 // negative regulation of interleukin-6 production // inferred from electronic annotation /// 0032760 // positive regulation of tumor necrosis factor production // inferred from electronic annotation /// 0033013 // tetrapyrrole metabolic process // inferred from electronic annotation /// 0033160 // positive regulation of protein import into nucleus, translocation // inferred from electronic annotation /// 0033209 // tumor necrosis factor-mediated signaling pathway // traceable author statement /// 0033209 // tumor necrosis factor-mediated signaling pathway // inferred from electronic annotation /// 0042511 // positive regulation of tyrosine phosphorylation of Stat1 protein // inferred from mutant phenotype /// 0042742 // defense response to bacterium // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0043200 // response to amino acid stimulus // inferred from electronic annotation /// 0043279 // response to alkaloid // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045471 // response to ethanol // inferred from electronic annotation /// 0045766 // positive regulation of angiogenesis // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0050728 // negative regulation of inflammatory response // inferred from mutant phenotype /// 0050729 // positive regulation of inflammatory response // inferred from sequence or structural similarity /// 0050729 // positive regulation of inflammatory response // inferred from electronic annotation /// 0071260 // cellular response to mechanical stimulus // inferred from expression pattern /// 0071392 // cellular response to estradiol stimulus // inferred from electronic annotation","0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005615 // extracellular space // inferred from direct assay /// 0005615 // extracellular space // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030424 // axon // inferred from electronic annotation /// 0043234 // protein complex // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay /// 0045121 // membrane raft // inferred from electronic annotation","0002020 // protease binding // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005031 // tumor necrosis factor-activated receptor activity // traceable author statement /// 0005031 // tumor necrosis factor-activated receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043120 // tumor necrosis factor binding // inferred from electronic annotation","chr12:6438310-6451170 (-) // 91.84 // p13.31"]
["11734315_a_at",8.0690975,9.572598,9.034565,8.687435,9.336852,8.786143,-0.14293551,0.10356808,0.020112514,-0.036412477,0.06759381,-0.020112514,0.9658463,0.90468055,-1.0070308,-0.010107873,1.0070308,"down","KIAA1456",57604,"0008152 // metabolic process // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation","","0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr8:12803182-12887286 (+) // 80.04 // p22"]
["11733572_at",6.1810827,7.108734,6.7999263,5.8482504,6.6318903,6.588283,-0.09680176,0.104931355,0.040857792,-0.17665625,0.004758835,-0.004758835,0.7168439,0.4199958,1.0535177,0.07521455,1.0535177,"up","DMRT3",58524,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007548 // sex differentiation // non-traceable author statement /// 0007548 // sex differentiation // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr9:976963-991732 (+) // 94.19 // p24.3"]
["11716953_at",2400.4795,2389.377,2417.3618,2409.9968,2375.7268,2395.7366,0.0014266968,-0.005261421,0.011537552,0.0071353912,-0.0135269165,-0.0014266968,0.7957372,0.54000217,1.0035926,0.005173753,1.0035926,"up","TMEM126A",84233,"0021554 // optic nerve development // inferred from mutant phenotype","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:85358962-85367586 (+) // 93.94 // q14.1"]
["11717321_at",118.44339,126.18902,110.160194,141.30286,120.2101,127.08591,-0.05637455,0.035014153,-0.16096926,0.19821787,-0.03501463,0.04523182,0.53137434,0.21632156,-1.0944871,-0.13025491,1.0944871,"down","OAF",220323,"","","","chr11:120081474-120101039 (+) // 87.07 // q23.3"]
["11760525_at",35.84126,41.70676,43.265663,32.683735,43.650074,54.099113,-0.24513054,-0.026470661,0.026470661,-0.37817907,0.039232254,0.3488531,0.8938104,0.72641563,-1.0606967,-0.08501221,1.0606967,"down","","","","","","chr3:99651964-99654108 (+) // 70.88 // q12.1"]
["11755164_a_at",9.042624,8.735145,9.427737,9.260627,9.656136,9.485251,-0.047269106,-0.0971787,0.012901068,-0.012900829,0.047435522,0.021675587,0.45838004,0.15984607,-1.0443358,-0.062585734,1.0443358,"down","LEFTY1",10637,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0003007 // heart morphogenesis // inferred from sequence or structural similarity /// 0007179 // transforming growth factor beta receptor signaling pathway // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007368 // determination of left/right symmetry // inferred from sequence or structural similarity /// 0016049 // cell growth // inferred from electronic annotation /// 0040007 // growth // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation /// 0005160 // transforming growth factor beta receptor binding // inferred from electronic annotation /// 0008083 // growth factor activity // inferred from electronic annotation","chr1:226073981-226076846 (-) // 98.3 // q42.12"]
["11741841_a_at",46.824974,40.89334,43.02883,42.859726,45.275856,42.859726,0.12481499,-0.07059717,0.002840519,-0.002840519,0.07627869,-0.002840519,0.98135996,0.9461546,-1.0031332,-0.0045131533,1.0031332,"down","C10orf71",118461,"","","","chr10:50507186-50535537 (+) // 98.12 // q11.23"]
["11735679_a_at",256.79712,226.73157,214.85706,262.42908,258.50897,239.58673,0.050040245,-0.12960386,-0.20721102,0.08133888,0.059625626,-0.050040245,0.5342411,0.21860676,-1.091188,-0.12589963,1.091188,"down","ACOT8",10005,"0006637 // acyl-CoA metabolic process // inferred from electronic annotation /// 0006699 // bile acid biosynthetic process // traceable author statement /// 0007031 // peroxisome organization // inferred from electronic annotation /// 0008206 // bile acid metabolic process // traceable author statement /// 0033540 // fatty acid beta-oxidation using acyl-CoA oxidase // traceable author statement /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation","0005739 // mitochondrion // inferred from electronic annotation /// 0005777 // peroxisome // inferred from electronic annotation /// 0005782 // peroxisomal matrix // inferred from direct assay /// 0005782 // peroxisomal matrix // inferred from mutant phenotype /// 0005782 // peroxisomal matrix // traceable author statement","0004091 // carboxylesterase activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0033882 // choloyl-CoA hydrolase activity // inferred from electronic annotation /// 0047617 // acyl-CoA hydrolase activity // inferred from direct assay /// 0047617 // acyl-CoA hydrolase activity // inferred from electronic annotation","chr20:44470360-44486035 (-) // 100.0 // q13.12"]
["11742545_at",17.490898,13.223252,14.351998,15.412385,15.994559,15.15779,0.19452953,-0.20899773,-0.09082317,0.012015104,0.06550622,-0.012015343,0.8642211,0.6648904,-1.0402516,-0.056932524,1.0402516,"down","OR5R1",219479,"0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007608 // sensory perception of smell // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050911 // detection of chemical stimulus involved in sensory perception of smell // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0004984 // olfactory receptor activity // inferred from electronic annotation","chr11:56184733-56185708 (-) // 100.0 // q12.1"]
["11761549_at",41.34609,35.34517,31.452524,30.276299,35.34517,35.78437,0.22623777,0,-0.16833735,-0.2233243,0,0.017816544,0.8075854,0.559612,1.0627503,0.087802716,1.0627503,"up","TMED3",23423,"0006810 // transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005793 // endoplasmic reticulum-Golgi intermediate compartment // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030126 // COPI vesicle coat // inferred from sequence or structural similarity /// 0030663 // COPI coated vesicle membrane // inferred from electronic annotation /// 0031410 // cytoplasmic vesicle // inferred from electronic annotation /// 0032580 // Golgi cisterna membrane // inferred from electronic annotation /// 0033116 // endoplasmic reticulum-Golgi intermediate compartment membrane // inferred from electronic annotation","","chr15:79603486-79606347 (+) // 46.02 // q25.1"]
["11723885_at",29.99273,26.059212,34.922207,29.915476,24.007225,24.163197,0.103270054,-0.09954929,0.32280207,0.09954929,-0.21787405,-0.20853138,0.5655292,0.24622393,1.1629531,0.21779296,1.1629531,"up","C17orf103",256302,"","","","chr17:21142182-21156722 (-) // 82.25 // p11.2"]
["11729457_a_at",33.946655,39.171947,32.968002,36.644318,38.63147,45.0143,-0.14841366,0.058137894,-0.19061661,-0.038093567,0.038093567,0.25870037,0.5128928,0.20084795,-1.1327773,-0.1798643,1.1327773,"down","BCL6B",255877,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:6926338-6932961 (+) // 97.69 // p13.1"]
["11733224_at",25.466166,24.808939,29.448557,28.088316,28.647774,30.859276,-0.15561485,-0.19333649,0.054000378,-0.014226437,0.014226437,0.121507645,0.49524492,0.18713132,-1.1010039,-0.13881956,1.1010039,"down","ZNF71",58491,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // non-traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // non-traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:57106647-57135790 (+) // 88.57 // q13.43"]
["11734383_a_at",23.91599,30.814705,28.918636,20.942537,23.783401,23.650799,0.0040102005,0.3696537,0.2780342,-0.18752909,-0.0040102005,-0.012076378,0.33537382,0.08488122,1.2184986,0.28510457,1.2184986,"up","AQP10",89872,"0006810 // transport // inferred from electronic annotation /// 0006833 // water transport // traceable author statement /// 0006833 // water transport // inferred from electronic annotation /// 0009636 // response to toxin // inferred from direct assay /// 0055085 // transmembrane transport // traceable author statement /// 0055085 // transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation","chr1:154293568-154297801 (+) // 99.29 // q21.3"]
["11743466_at",330.18402,365.2381,363.2733,399.21515,375.71637,360.11368,-0.14167595,0.0038909912,-0.0038909912,0.13222027,0.04469776,-0.016493797,0.49997905,0.1907933,-1.0722936,-0.10070003,1.0722936,"down","MPHOSPH6",10200,"0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000460 // maturation of 5.8S rRNA // inferred from mutant phenotype /// 0006364 // rRNA processing // inferred from electronic annotation","0000176 // nuclear exosome (RNase complex) // traceable author statement /// 0000178 // exosome (RNase complex) // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr16:82181766-82203831 (-) // 96.08 // q23.3"]
["11748500_a_at",6.500032,6.655451,6.6258116,5.9435725,6.255476,6.937818,-0.013825178,0.020264387,0.013825178,-0.14294171,-0.069152355,0.08020997,0.76327574,0.48795813,1.035779,0.050716214,1.035779,"up","ENPP5",59084,"0007154 // cell communication // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr6:46128730-46138708 (-) // 95.89 // p21.1"]
["11737939_a_at",139.3944,133.16994,121.96784,149.31415,156.51466,166.9497,-0.049589157,-0.1154933,-0.24226141,0.049589157,0.11753607,0.2106514,0.17607495,0.02338859,-1.1988963,-0.26170686,1.1988963,"down","RIPK1",8737,"0002756 // MyD88-independent toll-like receptor signaling pathway // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from direct assay /// 0006915 // apoptotic process // traceable author statement /// 0006917 // induction of apoptosis // inferred from mutant phenotype /// 0006919 // activation of cysteine-type endopeptidase activity involved in apoptotic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007165 // signal transduction // inferred from electronic annotation /// 0007257 // activation of JUN kinase activity // traceable author statement /// 0008063 // Toll signaling pathway // traceable author statement /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0008633 // activation of pro-apoptotic gene products // traceable author statement /// 0010940 // positive regulation of necrotic cell death // inferred from mutant phenotype /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032481 // positive regulation of type I interferon production // traceable author statement /// 0032757 // positive regulation of interleukin-8 production // inferred from direct assay /// 0032760 // positive regulation of tumor necrosis factor production // inferred from direct assay /// 0033209 // tumor necrosis factor-mediated signaling pathway // inferred by curator /// 0034138 // toll-like receptor 3 signaling pathway // traceable author statement /// 0034142 // toll-like receptor 4 signaling pathway // traceable author statement /// 0034612 // response to tumor necrosis factor // inferred from mutant phenotype /// 0035666 // TRIF-dependent toll-like receptor signaling pathway // traceable author statement /// 0042327 // positive regulation of phosphorylation // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0043068 // positive regulation of programmed cell death // inferred from mutant phenotype /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0045087 // innate immune response // traceable author statement /// 0045768 // positive regulation of anti-apoptosis // traceable author statement /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0046777 // protein autophosphorylation // inferred from direct assay /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0060545 // positive regulation of necroptosis // inferred from mutant phenotype /// 0060555 // induction of necroptosis by extracellular signals // inferred from mutant phenotype /// 0070926 // regulation of ATP:ADP antiporter activity // inferred from mutant phenotype /// 2000379 // positive regulation of reactive oxygen species metabolic process // traceable author statement /// 2001237 // negative regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype /// 2001238 // positive regulation of extrinsic apoptotic signaling pathway // inferred from mutant phenotype /// 2001243 // negative regulation of intrinsic apoptotic signaling pathway // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031264 // death-inducing signaling complex // inferred from direct assay /// 0043234 // protein complex // inferred from electronic annotation /// 0043235 // receptor complex // inferred from direct assay /// 0045121 // membrane raft // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from direct assay /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005123 // death receptor binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0070513 // death domain binding // inferred from physical interaction","chr6:3064121-3115421 (+) // 87.6 // p25.2"]
["11736630_at",41.857216,44.12885,41.88233,37.51497,49.113823,44.95419,-0.038555622,0.037690163,-0.037690163,-0.19656563,0.19209719,0.06442356,0.9226849,0.79312235,-1.0230218,-0.032836914,1.0230218,"down","BTBD17",388419,"","0005576 // extracellular region // inferred from electronic annotation","","chr17:72352554-72357958 (-) // 99.88 // q25.1"]
["11759163_at",14.7586775,14.5285845,13.484386,13.259887,16.779749,14.756228,0.011454105,-0.011214733,-0.11881924,-0.14304066,0.19661212,0.011214733,0.8282831,0.59539217,-1.0432768,-0.061121963,1.0432768,"down","CDH23 /// LOC100653137","100653137 /// 64072","0006816 // calcium ion transport // inferred from mutant phenotype /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007156 // homophilic cell adhesion // inferred from electronic annotation /// 0007601 // visual perception // inferred from electronic annotation /// 0007605 // sensory perception of sound // inferred from mutant phenotype /// 0007605 // sensory perception of sound // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0016339 // calcium-dependent cell-cell adhesion // non-traceable author statement /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0042491 // auditory receptor cell differentiation // inferred from electronic annotation /// 0045494 // photoreceptor cell maintenance // inferred from mutant phenotype /// 0048563 // post-embryonic organ morphogenesis // inferred from electronic annotation /// 0048839 // inner ear development // inferred from electronic annotation /// 0050896 // response to stimulus // inferred from electronic annotation /// 0050953 // sensory perception of light stimulus // inferred from mutant phenotype /// 0050953 // sensory perception of light stimulus // inferred from electronic annotation /// 0050957 // equilibrioception // inferred from mutant phenotype /// 0051480 // cytosolic calcium ion homeostasis // inferred from mutant phenotype /// 0060088 // auditory receptor cell stereocilium organization // inferred from electronic annotation","0001917 // photoreceptor inner segment // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0016020 // membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032420 // stereocilium // inferred from sequence or structural similarity /// 0032420 // stereocilium // inferred from electronic annotation /// 0032426 // stereocilium bundle tip // inferred from electronic annotation /// 0045202 // synapse // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr10:73156690-73407219 (+) // 84.54 // q22.1"]
["11724145_a_at",140.50194,112.82837,108.88214,168.4807,134.77579,108.22605,0.18824482,-0.12821579,-0.1795783,0.45023727,0.12821579,-0.18829775,0.7565336,0.47791654,-1.1249816,-0.16990146,1.1249816,"down","SLC37A1",54020,"0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005215 // transporter activity // inferred from electronic annotation","chr21:43919738-44001536 (+) // 96.15 // q22.3"]
["11738915_x_at",9.400705,8.633971,9.400705,9.964028,9.202873,9.285682,0.008880377,-0.11386418,0.008880377,0.09284067,-0.021803856,-0.008880615,0.6942248,0.3891847,-1.0372425,-0.05275327,1.0372425,"down","CD200R1",131450,"0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0050776 // regulation of immune response // traceable author statement","0005576 // extracellular region // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction","chr3:112647764-112693937 (-) // 100.0 // q13.2"]
["11750788_a_at",129.47331,117.56533,132.77808,110.4197,105.556206,115.76646,0.15031528,0.011122704,0.18667746,-0.07934189,-0.14432812,-0.011122227,0.23534344,0.042007975,1.1441709,0.19430253,1.1441709,"up","CSNK1G1",53944,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0016055 // Wnt receptor signaling pathway // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr15:64457935-64665968 (-) // 100.0 // q22.31"]
["11761080_at",15.70741,18.506313,13.230429,21.880138,16.289934,16.853033,-0.077049255,0.15952301,-0.3246348,0.40112734,-0.024513721,0.024513721,0.6477172,0.33091995,-1.160245,-0.21442941,1.160245,"down","SGSH",6448,"0006029 // proteoglycan metabolic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation","0003824 // catalytic activity // traceable author statement /// 0003824 // catalytic activity // inferred from electronic annotation /// 0008484 // sulfuric ester hydrolase activity // inferred from electronic annotation /// 0016250 // N-sulfoglucosamine sulfohydrolase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:78184362-78194137 (-) // 83.41 // q25.3"]
["11734519_x_at",6.4490223,6.9311414,5.7103953,5.9012766,6.6404195,7.13598,-0.021096945,0.082915545,-0.19658685,-0.14915037,0.021096945,0.1249342,0.8911334,0.7202672,-1.0308847,-0.04388304,1.0308847,"down","PAGE2",203569,"","","","chrX:55115440-55119269 (+) // 97.5 // p11.21"]
["11755661_a_at",12.141579,13.154628,11.48305,13.333058,11.086,12.670088,-0.030735254,0.08487916,-0.11118555,0.104316235,-0.1619525,0.030735254,0.9727694,0.92302316,-1.0069883,-0.010046902,1.0069883,"down","KCNMA1",3778,"0001666 // response to hypoxia // inferred from direct assay /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006813 // potassium ion transport // inferred from direct assay /// 0006813 // potassium ion transport // inferred from electronic annotation /// 0006970 // response to osmotic stress // inferred from direct assay /// 0007268 // synaptic transmission // traceable author statement /// 0007596 // blood coagulation // traceable author statement /// 0030007 // cellular potassium ion homeostasis // inferred from direct assay /// 0034465 // response to carbon monoxide // inferred from direct assay /// 0034465 // response to carbon monoxide // inferred from mutant phenotype /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0042391 // regulation of membrane potential // inferred from direct assay /// 0043065 // positive regulation of apoptotic process // inferred from mutant phenotype /// 0045794 // negative regulation of cell volume // inferred from direct assay /// 0051592 // response to calcium ion // inferred from direct assay /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0060073 // micturition // inferred from direct assay /// 0060083 // smooth muscle contraction involved in micturition // inferred from direct assay /// 0071805 // potassium ion transmembrane transport // not recorded /// 0071805 // potassium ion transmembrane transport // inferred from electronic annotation","0005886 // plasma membrane // traceable author statement /// 0005901 // caveola // inferred from direct assay /// 0008076 // voltage-gated potassium channel complex // inferred from direct assay /// 0008076 // voltage-gated potassium channel complex // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from direct assay /// 0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005249 // voltage-gated potassium channel activity // inferred from direct assay /// 0005249 // voltage-gated potassium channel activity // inferred from electronic annotation /// 0005267 // potassium channel activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0015269 // calcium-activated potassium channel activity // inferred from direct assay /// 0015269 // calcium-activated potassium channel activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0060072 // large conductance calcium-activated potassium channel activity // inferred from direct assay /// 0060072 // large conductance calcium-activated potassium channel activity // inferred from mutant phenotype /// 0060072 // large conductance calcium-activated potassium channel activity // inferred from electronic annotation","chr10:78637357-78943237 (-) // 98.39 // q22.3"]
["11716025_a_at",809.73627,765.70636,749.9629,708.30475,617.6591,624.47046,0.15185738,0.071196556,0.04122448,-0.04122448,-0.23878384,-0.22296143,0.17533067,0.023204206,1.1939558,0.2557494,1.1939558,"up","GOLGA7",51125,"","0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation","","chr8:41348134-41368499 (+) // 96.01 // p11.21"]
["11726963_s_at",111.83262,104.84466,125.22771,140.84647,132.59836,123.513336,-0.15326929,-0.24635744,0.009943485,0.17951298,0.092452526,-0.009943485,0.3233469,0.079260744,-1.1625035,-0.21723503,1.1625035,"down","SGTB",54557,"","","","chr5:64961756-65017940 (-) // 70.79 // q12.3"]
["11732950_a_at",103.84538,102.43481,96.72166,109.2229,71.70989,84.82888,0.06112814,0.04139757,-0.04139757,0.13396692,-0.47306442,-0.23068094,0.62522596,0.3056549,1.1569304,0.21030213,1.1569304,"up","AHI1",54806,"0001738 // morphogenesis of a polarized epithelium // inferred from sequence or structural similarity /// 0001947 // heart looping // inferred from sequence or structural similarity /// 0002092 // positive regulation of receptor internalization // inferred from sequence or structural similarity /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from sequence or structural similarity /// 0007417 // central nervous system development // inferred from sequence or structural similarity /// 0010842 // retina layer formation // inferred from sequence or structural similarity /// 0016192 // vesicle-mediated transport // inferred from sequence or structural similarity /// 0016192 // vesicle-mediated transport // inferred from electronic annotation /// 0030030 // cell projection organization // inferred from electronic annotation /// 0030862 // positive regulation of polarized epithelial cell differentiation // inferred from sequence or structural similarity /// 0030902 // hindbrain development // inferred from sequence or structural similarity /// 0033365 // protein localization to organelle // inferred from electronic annotation /// 0034613 // cellular protein localization // inferred from sequence or structural similarity /// 0035844 // cloaca development // inferred from sequence or structural similarity /// 0035845 // photoreceptor cell outer segment organization // inferred from sequence or structural similarity /// 0039008 // pronephric nephron tubule morphogenesis // inferred from sequence or structural similarity /// 0039023 // pronephric duct morphogenesis // inferred from sequence or structural similarity /// 0042384 // cilium assembly // inferred from sequence or structural similarity /// 0043066 // negative regulation of apoptotic process // inferred from sequence or structural similarity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from sequence or structural similarity /// 0050795 // regulation of behavior // inferred from sequence or structural similarity /// 0060271 // cilium morphogenesis // inferred from sequence or structural similarity /// 0060271 // cilium morphogenesis // inferred from electronic annotation /// 0065001 // specification of axis polarity // inferred from sequence or structural similarity /// 0070121 // Kupffer's vesicle development // inferred from sequence or structural similarity /// 0070986 // left/right axis specification // inferred from sequence or structural similarity /// 0071599 // otic vesicle development // inferred from sequence or structural similarity","0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005814 // centriole // inferred from sequence or structural similarity /// 0005814 // centriole // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005911 // cell-cell junction // inferred from direct assay /// 0005912 // adherens junction // inferred from direct assay /// 0005912 // adherens junction // inferred from electronic annotation /// 0005929 // cilium // inferred from sequence or structural similarity /// 0005929 // cilium // inferred from electronic annotation /// 0005932 // microtubule basal body // inferred from direct assay /// 0005932 // microtubule basal body // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation /// 0031513 // nonmotile primary cilium // inferred from sequence or structural similarity /// 0031513 // nonmotile primary cilium // inferred from electronic annotation /// 0036038 // TCTN-B9D complex // inferred from sequence or structural similarity /// 0042995 // cell projection // inferred from electronic annotation /// 0072372 // primary cilium // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr6:135708922-135818903 (-) // 96.46 // q23.3"]
["11732983_a_at",74.65675,79.8788,86.243774,80.121056,77.40833,83.22287,-0.09972429,-0.0021848679,0.108422756,0.002184391,-0.04750824,0.056982994,0.99291223,0.9808809,-1.0011896,-0.0017151949,1.0011896,"down","TMEM8B",51754,"0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from mutant phenotype /// 0007346 // regulation of mitotic cell cycle // traceable author statement /// 0040008 // regulation of growth // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr9:35829221-35847231 (+) // 92.96 // p13.3"]
["11757958_s_at",602.961,629.77625,654.6746,601.36957,622.90216,624.3895,-0.048661232,0.014113426,0.07005215,-0.052474022,-0.0017204285,0.0017204285,0.763723,0.48871845,1.0205353,0.029326156,1.0205353,"up","POGZ",23126,"0007049 // cell cycle // inferred from electronic annotation /// 0007064 // mitotic sister chromatid cohesion // inferred from mutant phenotype /// 0051301 // cell division // inferred from electronic annotation /// 0051382 // kinetochore assembly // inferred from mutant phenotype","0000790 // nuclear chromatin // inferred from direct assay /// 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:151375199-151375546 (-) // 98.86 // q21.3"]
["11760936_at",13.483178,10.381748,13.253875,11.000746,13.699194,14.598698,0.012373209,-0.364738,-0.012373209,-0.2811861,0.035303593,0.1270523,0.8627612,0.6613426,-1.0584618,-0.08196918,1.0584618,"down","CMTM5",116173,"0006935 // chemotaxis // inferred from electronic annotation","0005615 // extracellular space // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005125 // cytokine activity // inferred from electronic annotation","chr14:23846251-23848607 (+) // 96.17 // q11.2"]
["11721451_a_at",2024.0542,1940.4896,1862.553,2164.046,1750.6465,1575.94,0.09039688,0.029569626,-0.029569626,0.18688011,-0.11896324,-0.27063847,0.7844666,0.5206791,1.0700707,0.09770618,1.0700707,"up","ETF1",2107,"0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // traceable author statement /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay // inferred from electronic annotation /// 0006412 // translation // traceable author statement /// 0006412 // translation // inferred from electronic annotation /// 0006415 // translational termination // traceable author statement /// 0006415 // translational termination // inferred from electronic annotation /// 0006449 // regulation of translational termination // traceable author statement /// 0006479 // protein methylation // inferred from direct assay /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement","0003723 // RNA binding // traceable author statement /// 0003747 // translation release factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008079 // translation termination factor activity // traceable author statement /// 0016149 // translation release factor activity, codon specific // inferred from electronic annotation /// 0043022 // ribosome binding // traceable author statement","chr5:137841783-137878989 (-) // 97.35 // q31.2"]
["11753864_x_at",24.604261,29.130615,27.317478,24.773165,27.579664,29.285975,-0.1578064,0.08582163,-0.006890297,-0.14793634,0.006890297,0.09349537,0.97253245,0.9219714,-1.0072638,-0.010441542,1.0072638,"down","PAX5",5079,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001701 // in utero embryonic development // inferred from electronic annotation /// 0002053 // positive regulation of mesenchymal cell proliferation // inferred from electronic annotation /// 0002329 // pre-B cell differentiation // inferred from electronic annotation /// 0002639 // positive regulation of immunoglobulin production // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006959 // humoral immune response // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007275 // multicellular organismal development // traceable author statement /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007507 // heart development // inferred from electronic annotation /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0008045 // motor axon guidance // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0009887 // organ morphogenesis // traceable author statement /// 0021517 // ventral spinal cord development // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030324 // lung development // inferred from electronic annotation /// 0033152 // immunoglobulin V(D)J recombination // inferred from electronic annotation /// 0045214 // sarcomere organization // inferred from electronic annotation /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048745 // smooth muscle tissue development // inferred from electronic annotation /// 0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// 0051573 // negative regulation of histone H3-K9 methylation // inferred from electronic annotation /// 0055007 // cardiac muscle cell differentiation // inferred from electronic annotation /// 0060043 // regulation of cardiac muscle cell proliferation // inferred from electronic annotation /// 0072358 // cardiovascular system development // inferred from electronic annotation /// 2000727 // positive regulation of cardiac muscle cell differentiation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003705 // RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0019904 // protein domain specific binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0046982 // protein heterodimerization activity // inferred from electronic annotation","chr9:37002658-37026572 (-) // 100.0 // p13.2"]
["11761545_x_at",10.366213,13.567513,11.980277,9.626497,9.8354645,8.592958,0.037911892,0.42617917,0.24668455,-0.06889415,-0.037911654,-0.23275018,0.26083153,0.051516805,1.2746583,0.35011056,1.2746583,"up","FAM216A",29902,"","","","chr12:110906223-110925103 (+) // 63.1 // q24.11"]
["11716544_at",25.576616,33.903034,27.937113,28.207838,30.766865,36.444366,-0.2039113,0.20267773,-0.07655382,-0.06264067,0.06264067,0.30695915,0.7530345,0.472467,-1.0929662,-0.12824878,1.0929662,"down","TNNI1",7135,"0006937 // regulation of muscle contraction // inferred from electronic annotation /// 0006942 // regulation of striated muscle contraction // non-traceable author statement /// 0030049 // muscle filament sliding // traceable author statement /// 0055010 // ventricular cardiac muscle tissue morphogenesis // inferred from electronic annotation","0005829 // cytosol // traceable author statement /// 0005861 // troponin complex // non-traceable author statement /// 0005861 // troponin complex // inferred from electronic annotation","0003779 // actin binding // non-traceable author statement /// 0003779 // actin binding // inferred from electronic annotation /// 0005523 // tropomyosin binding // non-traceable author statement","chr1:201372433-201391295 (-) // 74.1 // q32.1"]
["11741617_a_at",6.6343646,8.06609,6.5085754,6.7349133,7.630434,7.634923,-0.11175394,0.17015743,-0.13937044,-0.09005284,0.09005284,0.09090161,0.8553208,0.64663625,-1.0405091,-0.05728959,1.0405091,"down","GPRIN3",285513,"","","","chr4:90165428-90229370 (-) // 99.1 // q22.1"]
["11750263_x_at",54.47208,63.308125,59.601685,65.928894,59.671757,62.358524,-0.16330004,0.05357361,-0.033463955,0.112093925,-0.031769276,0.031769753,0.6403028,0.3228412,-1.0607575,-0.0850949,1.0607575,"down","ZNF786",136051,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr7:148766732-148787810 (-) // 80.64 // q36.1"]
["11761443_a_at",31.537382,30.539778,31.930904,35.292755,33.755154,34.11465,-0.057967663,-0.10434103,-0.04007721,0.10434151,0.04007721,0.055360794,0.10468728,0.007929223,-1.0973738,-0.1340551,1.0973738,"down","KALRN",8997,"0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006915 // apoptotic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007264 // small GTPase mediated signal transduction // traceable author statement /// 0007399 // nervous system development // inferred from sequence or structural similarity /// 0008624 // induction of apoptosis by extracellular signals // traceable author statement /// 0016192 // vesicle-mediated transport // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation /// 0035556 // intracellular signal transduction // inferred from sequence or structural similarity /// 0048011 // nerve growth factor receptor signaling pathway // traceable author statement /// 0051056 // regulation of small GTPase mediated signal transduction // traceable author statement","0005622 // intracellular // inferred from sequence or structural similarity /// 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // traceable author statement /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr3:124355943-124393805 (+) // 99.38 // q21.2"]
["11729751_a_at",19.503345,20.43139,19.129251,16.89124,19.601614,22.61712,-0.003625393,0.06344032,-0.03156662,-0.21107197,0.003625393,0.21006823,0.98238844,0.94871706,1.0059385,0.008542148,1.0059385,"up","LPAR1",1902,"0000187 // activation of MAPK activity // inferred from electronic annotation /// 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // traceable author statement /// 0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// 0007202 // activation of phospholipase C activity // traceable author statement /// 0007204 // elevation of cytosolic calcium ion concentration // traceable author statement /// 0010942 // positive regulation of cell death // inferred from electronic annotation /// 0010977 // negative regulation of neuron projection development // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from electronic annotation /// 0032060 // bleb assembly // inferred from electronic annotation /// 0035025 // positive regulation of Rho protein signal transduction // inferred from electronic annotation /// 0042552 // myelination // inferred from electronic annotation /// 0043065 // positive regulation of apoptotic process // inferred from electronic annotation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from expression pattern /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0051482 // elevation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway // inferred from electronic annotation /// 0060999 // positive regulation of dendritic spine development // inferred from electronic annotation /// 0071453 // cellular response to oxygen levels // inferred from electronic annotation /// 0071673 // positive regulation of smooth muscle cell chemotaxis // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005887 // integral to plasma membrane // traceable author statement /// 0009986 // cell surface // inferred from direct assay /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from direct assay /// 0043197 // dendritic spine // inferred from electronic annotation /// 0043198 // dendritic shaft // inferred from electronic annotation","0001965 // G-protein alpha-subunit binding // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled receptor activity // traceable author statement /// 0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005543 // phospholipid binding // inferred from electronic annotation /// 0030165 // PDZ domain binding // inferred from electronic annotation /// 0070915 // lysophosphatidic acid receptor activity // inferred from electronic annotation","chr9:113635541-113800441 (-) // 85.81 // q31.3"]
["11751133_a_at",619.3178,655.38995,650.969,510.20126,499.77258,504.75076,0.13980675,0.22148037,0.2117157,-0.13980675,-0.16960144,-0.15530205,0.023688652,0.00021869353,1.2709475,0.34590438,1.2709475,"up","ATP6V1B2",526,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006879 // cellular iron ion homeostasis // traceable author statement /// 0008286 // insulin receptor signaling pathway // traceable author statement /// 0015991 // ATP hydrolysis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport // traceable author statement /// 0015992 // proton transport // inferred from electronic annotation /// 0033572 // transferrin transport // traceable author statement /// 0046034 // ATP metabolic process // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005829 // cytosol // inferred from sequence or structural similarity /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005902 // microvillus // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016469 // proton-transporting two-sector ATPase complex // inferred from electronic annotation /// 0033178 // proton-transporting two-sector ATPase complex, catalytic domain // inferred from electronic annotation /// 0033180 // proton-transporting V-type ATPase, V1 domain // inferred from electronic annotation /// 0042470 // melanosome // inferred from electronic annotation /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0005524 // ATP binding // inferred from electronic annotation /// 0015078 // hydrogen ion transmembrane transporter activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // inferred from electronic annotation /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism // inferred from electronic annotation /// 0046961 // proton-transporting ATPase activity, rotational mechanism // inferred from electronic annotation /// 0046961 // proton-transporting ATPase activity, rotational mechanism // traceable author statement","chr8:20054905-20078289 (+) // 99.87 // p21.3"]
["11760779_a_at",21.859386,22.004946,21.175919,20.641678,21.722944,22.541903,0.0045166016,0.014091492,-0.04131174,-0.07817602,-0.0045166016,0.048872948,0.9760473,0.93167984,1.0025717,0.0037054191,1.0025717,"up","MMP19",4327,"0001525 // angiogenesis // inferred from electronic annotation /// 0001541 // ovarian follicle development // inferred from electronic annotation /// 0001542 // ovulation from ovarian follicle // inferred from electronic annotation /// 0001554 // luteolysis // inferred from electronic annotation /// 0006508 // proteolysis // non-traceable author statement /// 0006508 // proteolysis // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009725 // response to hormone stimulus // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030574 // collagen catabolic process // inferred from electronic annotation /// 0051591 // response to cAMP // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix // non-traceable author statement /// 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation /// 0031012 // extracellular matrix // inferred from electronic annotation","0004222 // metalloendopeptidase activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008237 // metallopeptidase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr12:56231912-56236724 (-) // 99.91 // q13.2"]
["11719155_a_at",399.85403,399.38962,386.0561,438.72296,414.26422,394.08136,0.0008382797,-0.0008382797,-0.049824715,0.13467503,0.051916122,-0.020141602,0.51811916,0.20533471,-1.0512395,-0.07209138,1.0512395,"down","DRAM1",55332,"0006914 // autophagy // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr12:102271104-102317401 (+) // 85.76 // q23.2"]
["11759350_at",8.370455,6.880889,7.4142733,7.458112,8.40306,7.85674,0.1289351,-0.15377593,-0.04606557,-0.037560225,0.1345439,0.037559986,0.78209233,0.51614034,-1.0486138,-0.06848342,1.0486138,"down","METTL20",254013,"0006479 // protein methylation // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0008168 // methyltransferase activity // inferred from electronic annotation /// 0008276 // protein methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr12:31812608-31826879 (+) // 51.89 // p11.21"]
["11739217_a_at",13.756395,13.038026,15.254856,12.349681,16.09959,16.46859,-0.07458305,-0.15196013,0.07458305,-0.23021197,0.1523385,0.18503141,0.8268591,0.5931145,-1.0616975,-0.08637275,1.0616975,"down","RSAD2",91543,"0001503 // ossification // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0009615 // response to virus // inferred from direct assay /// 0009615 // response to virus // inferred from electronic annotation /// 0030278 // regulation of ossification // inferred from electronic annotation /// 0034157 // positive regulation of toll-like receptor 7 signaling pathway // inferred from sequence or structural similarity /// 0034165 // positive regulation of toll-like receptor 9 signaling pathway // inferred from sequence or structural similarity /// 0035710 // CD4-positive, alpha-beta T cell activation // inferred from sequence or structural similarity /// 0043367 // CD4-positive, alpha-beta T cell differentiation // inferred from sequence or structural similarity /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0045071 // negative regulation of viral genome replication // inferred from direct assay /// 0050709 // negative regulation of protein secretion // inferred from direct assay /// 0051607 // defense response to virus // inferred from direct assay /// 0051607 // defense response to virus // inferred from electronic annotation /// 2000553 // positive regulation of T-helper 2 cell cytokine production // inferred from sequence or structural similarity","0005739 // mitochondrion // inferred from direct assay /// 0005741 // mitochondrial outer membrane // inferred from direct assay /// 0005743 // mitochondrial inner membrane // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005811 // lipid particle // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043621 // protein self-association // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from direct assay","chr2:7017774-7038937 (+) // 87.81 // p25.2"]
["11718370_a_at",187.9232,190.72218,197.11018,240.21289,213.36331,202.6994,-0.089028835,-0.06769943,-0.020169735,0.2651415,0.09414005,0.020169735,0.30265316,0.06958761,-1.1371714,-0.1854497,1.1371714,"down","NRBF2",29982,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation","chr10:64893006-64914786 (+) // 96.84 // q21.3"]
["11749759_a_at",12.155252,12.877439,12.427824,9.997937,14.737071,11.17242,-0.015996933,0.06726885,0.015996695,-0.2978742,0.26187325,-0.13763523,0.86112803,0.6579637,1.057239,0.08030163,1.057239,"up","SCN3A",6328,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0006814 // sodium ion transport // non-traceable author statement /// 0006814 // sodium ion transport // inferred from electronic annotation /// 0034765 // regulation of ion transmembrane transport // inferred from electronic annotation /// 0035725 // sodium ion transmembrane transport // inferred from electronic annotation /// 0055085 // transmembrane transport // inferred from electronic annotation","0001518 // voltage-gated sodium channel complex // non-traceable author statement /// 0001518 // voltage-gated sodium channel complex // inferred from electronic annotation /// 0005624 // membrane fraction // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005244 // voltage-gated ion channel activity // inferred from electronic annotation /// 0005248 // voltage-gated sodium channel activity // non-traceable author statement /// 0005248 // voltage-gated sodium channel activity // inferred from electronic annotation /// 0005272 // sodium channel activity // inferred from electronic annotation","chr2:165946480-165950338 (-) // 94.65 // q24.3"]
["11722249_s_at",71.66333,59.70119,61.23091,59.851303,70.38523,71.99892,0.12646866,-0.13700628,-0.100506306,-0.13338375,0.100506306,0.13320827,0.82008517,0.5814944,-1.0500501,-0.07045822,1.0500501,"down","C10orf11",83938,"","","","chr10:77542518-78317130 (+) // 96.03 // q22.2"]
["11733758_a_at",124.4594,112.80607,118.36997,119.22279,118.03668,131.55612,0.06719351,-0.07463646,-0.0051784515,0.0051784515,-0.0092458725,0.14719677,0.7490365,0.46639067,-1.0366414,-0.05191686,1.0366414,"down","ZNF446",55663,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:58987751-58992593 (+) // 98.19 // q13.43"]
["11721725_at",131.61679,120.68101,120.071915,152.4675,127.94514,126.12368,0.05116129,-0.07398367,-0.08128357,0.26331902,0.010343075,-0.010343075,0.59891534,0.27916646,-1.0886008,-0.12247494,1.0886008,"down","PSKH1",5681,"0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016607 // nuclear speck // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // non-traceable author statement /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr16:67927164-67963581 (+) // 96.04 // q22.1"]
["11739969_a_at",271.77097,264.27856,289.70947,278.30307,268.84912,283.5464,-0.01713276,-0.0574646,0.07508278,0.01713276,-0.03272724,0.044060707,0.94484824,0.84666204,-1.0064859,-0.009327018,1.0064859,"down","MIER1",57708,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007165 // signal transduction // inferred from mutant phenotype /// 0031937 // positive regulation of chromatin silencing // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0017053 // transcriptional repressor complex // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction","chr1:67395925-67454302 (+) // 97.07 // p31.3"]
["11764016_a_at",107.766304,69.80151,100.83201,98.109604,82.63688,92.13161,0.180789,-0.44578743,0.08483648,0.04534912,-0.20226002,-0.04534912,0.9910751,0.9734258,1.0051188,0.007366098,1.0051188,"up","TRAPPC2L",51693,"0006810 // transport // inferred from electronic annotation /// 0006888 // ER to Golgi vesicle-mediated transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","","chr16:88928480-88929086 (+) // 52.33 // q24.3"]
["11729417_at",11.100387,9.782606,14.259263,10.914156,11.998551,14.259263,-0.056125164,-0.23844433,0.3051641,-0.0805347,0.056125164,0.3051641,0.8662468,0.6691645,-1.0644095,-0.09005328,1.0644095,"down","KRT24",192666,"","0005737 // cytoplasm // inferred from direct assay /// 0005882 // intermediate filament // inferred from electronic annotation /// 0045111 // intermediate filament cytoskeleton // inferred from direct assay","0005198 // structural molecule activity // inferred from electronic annotation","chr17:38854244-38860004 (-) // 99.05 // q21.2"]
["11744054_a_at",139.51262,126.77705,118.60118,181.0319,187.3836,171.71889,-0.14982653,-0.28792858,-0.38410378,0.22602177,0.27577305,0.14982653,0.06813885,0.0031328243,-1.4055747,-0.4911601,1.4055747,"down","ZNFX1",57169,"","","0046872 // metal ion binding // inferred from electronic annotation","chr20:47862433-47894963 (-) // 94.87 // q13.13"]
["11761367_x_at",29.913557,30.066683,32.491604,27.399338,28.706026,32.539623,-0.0036830902,0.0036830902,0.11558437,-0.13034153,-0.06312895,0.11771488,0.76327574,0.48762408,1.0452007,0.06378,1.0452007,"up","PKD2L2",27039,"0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005216 // ion channel activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from electronic annotation","chr5:137225154-137278432 (+) // 87.6 // q31.2"]
["11735553_a_at",89.05734,89.90921,76.602585,87.430145,72.56308,62.360954,0.12197256,0.13570738,-0.09536886,0.09536886,-0.17352581,-0.39211845,0.5766917,0.256969,1.1573796,0.21086214,1.1573796,"up","C16orf93",90835,"","","","chr16:30768752-30773542 (-) // 98.81 // p11.2"]
["11724660_a_at",28.77154,29.82998,34.340996,25.159416,29.611269,28.34717,-0.020751953,0.031368732,0.2345376,-0.21429586,0.020751953,-0.042189598,0.51330405,0.20114411,1.1175164,0.160296,1.1175164,"up","PAX8",7849,"0001655 // urogenital system development // inferred from sequence or structural similarity /// 0001655 // urogenital system development // inferred from electronic annotation /// 0001656 // metanephros development // inferred from electronic annotation /// 0001658 // branching involved in ureteric bud morphogenesis // inferred from expression pattern /// 0001822 // kidney development // inferred from expression pattern /// 0001823 // mesonephros development // inferred from sequence or structural similarity /// 0001823 // mesonephros development // inferred from electronic annotation /// 0003337 // mesenchymal to epithelial transition involved in metanephros morphogenesis // inferred from expression pattern /// 0006351 // transcription, DNA-dependent // inferred from direct assay /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007417 // central nervous system development // inferred from expression pattern /// 0007417 // central nervous system development // inferred from electronic annotation /// 0009653 // anatomical structure morphogenesis // traceable author statement /// 0030154 // cell differentiation // inferred from electronic annotation /// 0030878 // thyroid gland development // inferred from expression pattern /// 0030878 // thyroid gland development // inferred from mutant phenotype /// 0030878 // thyroid gland development // inferred from electronic annotation /// 0039003 // pronephric field specification // inferred from sequence or structural similarity /// 0039003 // pronephric field specification // inferred from electronic annotation /// 0042472 // inner ear morphogenesis // inferred from sequence or structural similarity /// 0042472 // inner ear morphogenesis // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from sequence or structural similarity /// 0042981 // regulation of apoptotic process // inferred from electronic annotation /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from sequence or structural similarity /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0048793 // pronephros development // inferred from sequence or structural similarity /// 0048793 // pronephros development // inferred from electronic annotation /// 0071371 // cellular response to gonadotropin stimulus // inferred from direct assay /// 0071599 // otic vesicle development // inferred from expression pattern /// 0072050 // S-shaped body morphogenesis // inferred from electronic annotation /// 0072073 // kidney epithelium development // inferred from electronic annotation /// 0072108 // positive regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis // inferred from sequence or structural similarity /// 0072108 // positive regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis // inferred from electronic annotation /// 0072164 // mesonephric tubule development // inferred from electronic annotation /// 0072205 // metanephric collecting duct development // inferred from electronic annotation /// 0072207 // metanephric epithelium development // inferred from expression pattern /// 0072221 // metanephric distal convoluted tubule development // inferred from sequence or structural similarity /// 0072221 // metanephric distal convoluted tubule development // inferred from electronic annotation /// 0072278 // metanephric comma-shaped body morphogenesis // inferred from expression pattern /// 0072284 // metanephric S-shaped body morphogenesis // inferred from expression pattern /// 0072289 // metanephric nephron tubule formation // inferred from sequence or structural similarity /// 0072289 // metanephric nephron tubule formation // inferred from electronic annotation /// 0072305 // negative regulation of mesenchymal stem cell apoptotic process involved in metanephric nephron morphogenesis // inferred from sequence or structural similarity /// 0072305 // negative regulation of mesenchymal stem cell apoptotic process involved in metanephric nephron morphogenesis // inferred from electronic annotation /// 0072307 // regulation of metanephric nephron tubule epithelial cell differentiation // inferred from sequence or structural similarity /// 0072307 // regulation of metanephric nephron tubule epithelial cell differentiation // inferred from electronic annotation /// 0090190 // positive regulation of branching involved in ureteric bud morphogenesis // inferred from sequence or structural similarity /// 0090190 // positive regulation of branching involved in ureteric bud morphogenesis // inferred from electronic annotation /// 1900212 // negative regulation of mesenchymal cell apoptotic process involved in metanephros development // inferred from sequence or structural similarity /// 1900215 // negative regulation of apoptotic process involved in metanephric collecting duct development // inferred from sequence or structural similarity /// 1900218 // negative regulation of apoptotic process involved in metanephric nephron tubule development // inferred from sequence or structural similarity /// 2000594 // positive regulation of metanephric DCT cell differentiation // inferred from sequence or structural similarity /// 2000594 // positive regulation of metanephric DCT cell differentiation // inferred from electronic annotation /// 2000611 // positive regulation of thyroid hormone generation // inferred from mutant phenotype /// 2000611 // positive regulation of thyroid hormone generation // inferred from electronic annotation /// 2000612 // regulation of thyroid-stimulating hormone secretion // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from sequence or structural similarity /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay","0000979 // RNA polymerase II core promoter sequence-specific DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from mutant phenotype /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0004996 // thyroid-stimulating hormone receptor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0044212 // transcription regulatory region DNA binding // inferred from direct assay /// 0044212 // transcription regulatory region DNA binding // inferred from electronic annotation","chr2:113972093-114036527 (-) // 91.34 // q13"]
["11753748_x_at",74.043465,79.64599,77.78627,58.04632,61.12643,80.72202,-0.035571575,0.0696578,0.035571575,-0.38673973,-0.3121481,0.08901787,0.5212328,0.20785998,1.1700006,0.22650921,1.1700006,"up","MED16",10025,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // non-traceable author statement /// 0006366 // transcription from RNA polymerase II promoter // traceable author statement /// 0006367 // transcription initiation from RNA polymerase II promoter // inferred from direct assay /// 0006367 // transcription initiation from RNA polymerase II promoter // traceable author statement /// 0010467 // gene expression // traceable author statement /// 0030518 // intracellular steroid hormone receptor signaling pathway // inferred from direct assay /// 0030521 // androgen receptor signaling pathway // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay","0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // traceable author statement /// 0016592 // mediator complex // inferred from direct assay /// 0016592 // mediator complex // inferred from electronic annotation","0003712 // transcription cofactor activity // inferred from direct assay /// 0003713 // transcription coactivator activity // traceable author statement /// 0004872 // receptor activity // inferred from direct assay /// 0030375 // thyroid hormone receptor coactivator activity // inferred from direct assay /// 0042809 // vitamin D receptor binding // non-traceable author statement /// 0046966 // thyroid hormone receptor binding // inferred from direct assay","chr19:867971-891148 (-) // 100.0 // p13.3"]
["11732847_at",33.814983,37.270916,41.363625,35.26532,41.146088,40.952503,-0.20833826,-0.067950726,0.0823617,-0.14775085,0.07475424,0.067950726,0.8317065,0.601765,-1.0446072,-0.0629605,1.0446072,"down","CABP7",164633,"","0005737 // cytoplasm // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0032588 // trans-Golgi network membrane // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005509 // calcium ion binding // inferred from electronic annotation","chr22:30116343-30127826 (+) // 84.66 // q12.2"]
["11716236_s_at",1317.5393,1350.5792,1288.3291,1147.92,1349.5878,1293.7397,0.0131492615,0.04888153,-0.019195557,-0.18567467,0.047822,-0.0131492615,0.7191797,0.42396283,1.0458039,0.06461236,1.0458039,"up","RAE1",8480,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006406 // mRNA export from nucleus // traceable author statement /// 0008645 // hexose transport // traceable author statement /// 0010827 // regulation of glucose transport // traceable author statement /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0055085 // transmembrane transport // traceable author statement /// 0071407 // cellular response to organic cyclic compound // inferred from electronic annotation","0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005635 // nuclear envelope // traceable author statement /// 0005640 // nuclear outer membrane // traceable author statement /// 0005643 // nuclear pore // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005856 // cytoskeleton // traceable author statement","0003723 // RNA binding // traceable author statement /// 0008017 // microtubule binding // inferred from sequence or structural similarity","chr20:55926585-55953796 (+) // 95.85 // q13.31"]
["11731368_at",18.883057,20.649662,18.920002,19.64166,19.941952,19.64583,-0.05697775,0.07204819,-0.054157734,-0.00015306473,0.021736622,0.00015306473,0.8634598,0.66298795,-1.0141525,-0.020274647,1.0141525,"down","ZNF442",79973,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr19:12460183-12476475 (-) // 77.08 // p13.2"]
["11722373_a_at",180.43419,154.7229,151.74918,176.32327,150.107,145.67984,0.23578405,0.013998985,-0.013999462,0.20253468,-0.029696941,-0.072886944,0.88936645,0.7171828,1.0318817,0.04527757,1.0318817,"up","GGA2",23062,"0006810 // transport // inferred from electronic annotation /// 0006886 // intracellular protein transport // non-traceable author statement /// 0006886 // intracellular protein transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016192 // vesicle-mediated transport // inferred from electronic annotation","0005622 // intracellular // non-traceable author statement /// 0005622 // intracellular // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005802 // trans-Golgi network // inferred from direct assay /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030131 // clathrin adaptor complex // inferred from electronic annotation /// 0030136 // clathrin-coated vesicle // inferred from direct assay /// 0044431 // Golgi apparatus part // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0030306 // ADP-ribosylation factor binding // inferred from direct assay","chr16:23474936-23521835 (-) // 83.87 // p12.2"]
["11755648_a_at",201.76768,212.33676,217.82748,225.38892,216.44539,219.0983,-0.105899334,-0.03224039,0.004591465,0.053822517,-0.004591465,0.012983799,0.44638863,0.15089183,-1.0462694,-0.0652544,1.0462694,"down","MICAL2",9645,"0008152 // metabolic process // inferred from electronic annotation /// 0030042 // actin filament depolymerization // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation","0003779 // actin binding // inferred from sequence or structural similarity /// 0003779 // actin binding // inferred from electronic annotation /// 0004497 // monooxygenase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016709 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen // inferred from sequence or structural similarity /// 0046872 // metal ion binding // inferred from electronic annotation /// 0071949 // FAD binding // inferred from sequence or structural similarity","chr11:12274078-12285334 (+) // 59.68 // p15.3"]
["11746423_a_at",382.4806,341.94482,347.01086,362.0607,310.38663,310.29657,0.15101433,-0.010608673,0.010608673,0.07185936,-0.15030575,-0.15072441,0.5486095,0.23105879,1.091815,0.12672842,1.091815,"up","RNFT1",51136,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr17:58030263-58042122 (-) // 96.41 // q23.1"]
["11762184_at",23.144094,26.526413,22.014278,22.001505,25.830887,27.297594,-0.079226494,0.117558956,-0.15143108,-0.15226841,0.079226494,0.15890312,0.8401474,0.61882746,-1.0470425,-0.06631999,1.0470425,"down","SLC25A42",284439,"0006810 // transport // inferred from electronic annotation /// 0015866 // ADP transport // inferred from direct assay /// 0015867 // ATP transport // inferred from direct assay /// 0035349 // coenzyme A transmembrane transport // inferred from direct assay /// 0055085 // transmembrane transport // inferred from electronic annotation /// 0080121 // AMP transport // inferred from direct assay","0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005347 // ATP transmembrane transporter activity // inferred from direct assay /// 0015217 // ADP transmembrane transporter activity // inferred from direct assay /// 0015228 // coenzyme A transmembrane transporter activity // inferred from direct assay /// 0043262 // adenosine-diphosphatase activity // inferred from direct assay /// 0080122 // AMP transmembrane transporter activity // inferred from direct assay","chr19:19206751-19217743 (+) // 76.22 // p13.11"]
["11744248_a_at",28.004757,28.702345,27.095907,28.704699,28.395586,31.942156,-0.027745724,0.007750988,-0.075342655,0.007869244,-0.007750988,0.16204405,0.5374417,0.22126406,-1.0613005,-0.08583322,1.0613005,"down","LRRC4C",57689,"0050770 // regulation of axonogenesis // inferred from direct assay","0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr11:40135752-40315691 (-) // 94.38 // p12"]
["11721718_a_at",268.52124,236.8755,228.72285,243.90215,200.4076,210.57436,0.20617199,0.025264263,-0.025264263,0.067438126,-0.2159276,-0.14453459,0.5186358,0.20604736,1.1222535,0.16639864,1.1222535,"up","ATRX",546,"0006281 // DNA repair // inferred from electronic annotation /// 0006281 // DNA repair // traceable author statement /// 0006306 // DNA methylation // traceable author statement /// 0006310 // DNA recombination // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0032508 // DNA duplex unwinding // traceable author statement","0000228 // nuclear chromosome // inferred from electronic annotation /// 0000792 // heterochromatin // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005720 // nuclear heterochromatin // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003678 // DNA helicase activity // traceable author statement /// 0003682 // chromatin binding // inferred from electronic annotation /// 0004386 // helicase activity // traceable author statement /// 0004386 // helicase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0070087 // chromo shadow domain binding // inferred from physical interaction","chrX:76760357-77041755 (-) // 97.35 // q21.1"]
["11758201_s_at",309.8432,306.28238,339.05634,447.8407,544.15845,498.38333,-0.3307171,-0.34739304,-0.20073032,0.20073032,0.48177147,0.3550005,0.060326383,0.0024059718,-1.5570129,-0.6387809,1.5570129,"down","IMPAD1",54928,"0001501 // skeletal system development // inferred from electronic annotation /// 0001958 // endochondral ossification // inferred from electronic annotation /// 0002063 // chondrocyte development // inferred from electronic annotation /// 0006021 // inositol biosynthetic process // inferred from electronic annotation /// 0009791 // post-embryonic development // inferred from electronic annotation /// 0030204 // chondroitin sulfate metabolic process // inferred from electronic annotation /// 0042733 // embryonic digit morphogenesis // inferred from electronic annotation /// 0046854 // phosphatidylinositol phosphorylation // inferred from electronic annotation","0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0008254 // 3'-nucleotidase activity // inferred from electronic annotation /// 0008441 // 3'(2'),5'-bisphosphate nucleotidase activity // inferred from electronic annotation /// 0008934 // inositol monophosphate 1-phosphatase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0052832 // inositol monophosphate 3-phosphatase activity // inferred from electronic annotation /// 0052833 // inositol monophosphate 4-phosphatase activity // inferred from electronic annotation /// 0052834 // inositol monophosphate phosphatase activity // inferred from electronic annotation","chr8:57870489-57871203 (-) // 70.28 // q12.1"]
["11763943_at",15.848121,17.321493,17.852892,21.503027,22.939863,17.729816,-0.16685581,-0.03860426,0.004990101,0.27337217,0.3666892,-0.004990101,0.33794844,0.08622474,-1.2129446,-0.2785137,1.2129446,"down","MT1DP",326343,"","","0046872 // metal ion binding // inferred from electronic annotation","chr16:56677597-56679161 (+) // 89.9 // q12.2"]
["11717792_a_at",60.827427,53.78234,49.189983,48.820595,55.006325,54.042713,0.17410564,-0.0034837723,-0.13225174,-0.14312649,0.028981209,0.0034837723,0.8607832,0.6570568,1.0350333,0.049677245,1.0350333,"up","FAM219A",203259,"","","","chr9:34398026-34458568 (-) // 87.17 // p13.3"]
["11761565_x_at",294.59595,259.0843,249.92743,227.72278,220.5399,199.50133,0.30434322,0.11902714,0.06711483,-0.06711531,-0.11335468,-0.25799608,0.1928121,0.028285699,1.2394073,0.30965036,1.2394073,"up","CEP70",80321,"0000086 // G2/M transition of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement","0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005813 // centrosome // inferred from direct assay /// 0005815 // microtubule organizing center // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from direct assay","0005515 // protein binding // inferred from physical interaction","chr3:138251355-138313382 (-) // 82.69 // q22.3"]
["11763255_x_at",39.48043,36.00249,52.89196,47.402954,46.757465,47.495747,-0.25394917,-0.38699007,0.1679616,0.0098900795,-0.0098900795,0.012711525,0.69341844,0.38832554,-1.1187568,-0.16189641,1.1187568,"down","IGLJ3",28831,"","","","chr22:23063353-23264812 (+) // 84.66 // q11.22"]
["11727076_x_at",23.74337,27.731205,24.084986,24.04679,25.679508,31.095232,-0.06685114,0.15713453,-0.04624176,-0.048531532,0.04624176,0.3223176,0.78696716,0.5248819,-1.0658433,-0.09199541,1.0658433,"down","PLAC4",191585,"","0019028 // viral capsid // inferred from electronic annotation","0005198 // structural molecule activity // inferred from electronic annotation","chr21:42547158-42551989 (-) // 27.4 // q22.2"]
["11758873_a_at",47.78581,59.22054,46.091434,66.97963,74.470245,70.352806,-0.39832783,-0.08881235,-0.45041132,0.08881235,0.24175406,0.15969801,0.15046896,0.017148493,-1.3908228,-0.4759386,1.3908228,"down","HPSE",10855,"0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006029 // proteoglycan metabolic process // traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007160 // cell-matrix adhesion // inferred from direct assay /// 0010575 // positive regulation vascular endothelial growth factor production // inferred from direct assay /// 0030194 // positive regulation of blood coagulation // inferred from direct assay /// 0030200 // heparan sulfate proteoglycan catabolic process // inferred from direct assay /// 0033690 // positive regulation of osteoblast proliferation // inferred from direct assay /// 0033690 // positive regulation of osteoblast proliferation // inferred from electronic annotation /// 0042060 // wound healing // inferred from electronic annotation /// 0051797 // regulation of hair follicle development // inferred from direct assay /// 0051798 // positive regulation of hair follicle development // inferred from electronic annotation /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from direct assay /// 0051897 // positive regulation of protein kinase B signaling cascade // inferred from electronic annotation /// 0060055 // angiogenesis involved in wound healing // inferred from electronic annotation /// 0061042 // vascular wound healing // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0045121 // membrane raft // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004566 // beta-glucuronidase activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0030305 // heparanase activity // inferred from direct assay /// 0043169 // cation binding // inferred from electronic annotation /// 0045545 // syndecan binding // inferred from direct assay /// 0046983 // protein dimerization activity // inferred from direct assay","chr4:84213613-84256306 (-) // 72.12 // q21.23"]
["11731483_a_at",10.122075,14.177289,14.463254,14.174871,14.463254,17.95412,-0.50048184,-0.014405251,0.014405251,-0.01465106,0.014405251,0.32632804,0.5582439,0.23945887,-1.2104315,-0.27552137,1.2104315,"down","CNRIP1",25927,"","","","chr2:68520148-68547193 (-) // 97.66 // p14"]
["11722822_a_at",12.983747,11.217194,13.309204,14.195482,13.3408165,12.375325,-0.017858744,-0.2288537,0.017858982,0.11086631,0.021281242,-0.087099075,0.69881773,0.39509326,-1.0653301,-0.09130059,1.0653301,"down","SKP1",6500,"0000080 // G1 phase of mitotic cell cycle // traceable author statement /// 0000082 // G1/S transition of mitotic cell cycle // traceable author statement /// 0000084 // S phase of mitotic cell cycle // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0007219 // Notch signaling pathway // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0016567 // protein ubiquitination // inferred from direct assay /// 0016567 // protein ubiquitination // inferred from electronic annotation /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process // traceable author statement /// 0031146 // SCF-dependent proteasomal ubiquitin-dependent protein catabolic process // inferred from direct assay /// 0031146 // SCF-dependent proteasomal ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0035518 // histone H2A monoubiquitination // inferred from direct assay /// 0051437 // positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement /// 0051439 // regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle // traceable author statement","0005654 // nucleoplasm // traceable author statement /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0019005 // SCF ubiquitin ligase complex // inferred from direct assay /// 0019005 // SCF ubiquitin ligase complex // inferred from electronic annotation /// 0031519 // PcG protein complex // inferred from direct assay","0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr5:133492081-133512724 (-) // 98.94 // q31.1"]
["11747218_a_at",18.047367,23.587261,25.114113,18.77623,19.449453,25.204828,-0.24708033,0.13913918,0.22962952,-0.18996143,-0.13913918,0.23483133,0.8976441,0.7349069,1.0511626,0.07198585,1.0511626,"up","LOC442028",442028,"","","","chr2:95533230-95601120 (-) // 91.97 // q11.1"]
["11762671_at",8.944337,8.651877,9.423178,8.606827,8.153738,9.303946,0.023980618,-0.023980618,0.0992198,-0.0315125,-0.109532356,0.080848694,0.74778634,0.4650521,1.0375197,0.05313872,1.0375197,"up","C2",717,"0006508 // proteolysis // inferred from electronic annotation /// 0006956 // complement activation // traceable author statement /// 0006956 // complement activation // inferred from electronic annotation /// 0006958 // complement activation, classical pathway // inferred from electronic annotation /// 0006958 // complement activation, classical pathway // traceable author statement /// 0030449 // regulation of complement activation // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0045087 // innate immune response // inferred from electronic annotation","0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // traceable author statement","0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr6:31895479-31902785 (+) // 65.35 // p21.33"]
["11741085_a_at",2072.3386,1862.9014,1787.1298,1958.6115,1922.3892,1955.5544,0.0960207,-0.05768776,-0.11759472,0.014592171,-0.012338638,0.012338638,0.8576919,0.65153843,-1.0219216,-0.031284567,1.0219216,"down","APLP2",334,"0001967 // suckling behavior // inferred from electronic annotation /// 0006878 // cellular copper ion homeostasis // inferred from electronic annotation /// 0007176 // regulation of epidermal growth factor-activated receptor activity // inferred from electronic annotation /// 0007186 // G-protein coupled receptor signaling pathway // non-traceable author statement /// 0007617 // mating behavior // inferred from electronic annotation /// 0007626 // locomotory behavior // inferred from electronic annotation /// 0009790 // embryo development // inferred from electronic annotation /// 0010466 // negative regulation of peptidase activity // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0030901 // midbrain development // inferred from electronic annotation /// 0050885 // neuromuscular process controlling balance // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // non-traceable author statement /// 0016021 // integral to membrane // inferred from electronic annotation","0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotation /// 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008201 // heparin binding // inferred from electronic annotation /// 0030414 // peptidase inhibitor activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0046914 // transition metal ion binding // inferred from electronic annotation","chr11:129939715-130014705 (+) // 96.28 // q24.3"]
["11753363_x_at",27.548197,27.233637,24.43969,25.255112,23.468082,26.536936,0.08966923,0.07310104,-0.08306265,-0.035713196,-0.14158869,0.035713196,0.6894917,0.3831254,1.0524601,0.0737655,1.0524601,"up","ZSCAN2",54993,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007283 // spermatogenesis // inferred from electronic annotation /// 0016032 // viral reproduction // inferred from electronic annotation /// 0030154 // cell differentiation // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:85147131-85166867 (+) // 87.88 // q25.2"]
["11754717_a_at",346.96866,365.84122,357.48456,330.7227,342.98346,329.692,0.008333206,0.08474541,0.051408768,-0.060850143,-0.008333206,-0.06535339,0.20424603,0.031682014,1.0665917,0.09300806,1.0665917,"up","TPP2",7174,"0000209 // protein polyubiquitination // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0006508 // proteolysis // not recorded /// 0006508 // proteolysis // inferred from electronic annotation /// 0006508 // proteolysis // traceable author statement","0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0004175 // endopeptidase activity // traceable author statement /// 0004177 // aminopeptidase activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity // not recorded /// 0004252 // serine-type endopeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferred from electronic annotation /// 0008236 // serine-type peptidase activity // inferred from electronic annotation /// 0008240 // tripeptidyl-peptidase activity // inferred from electronic annotation /// 0008240 // tripeptidyl-peptidase activity // traceable author statement /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0042277 // peptide binding // inferred from electronic annotation","chr13:103309296-103330809 (+) // 65.15 // q33.1"]
["11744028_a_at",264.29672,282.20212,276.82477,287.37845,300.46265,255.49562,-0.08069229,0.013877869,-0.013877869,0.04010105,0.10433483,-0.12955236,0.8785242,0.6936064,-1.0223284,-0.03185867,1.0223284,"down","SLC35A1",10559,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006464 // cellular protein modification process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008643 // carbohydrate transport // inferred from electronic annotation /// 0015780 // nucleotide-sugar transport // inferred from electronic annotation /// 0015782 // CMP-N-acetylneuraminate transport // traceable author statement /// 0055085 // transmembrane transport // traceable author statement","0000139 // Golgi membrane // inferred from electronic annotation /// 0000139 // Golgi membrane // traceable author statement /// 0005794 // Golgi apparatus // traceable author statement /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005887 // integral to plasma membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005338 // nucleotide-sugar transmembrane transporter activity // inferred from electronic annotation /// 0005351 // sugar:hydrogen symporter activity // inferred from electronic annotation /// 0005456 // CMP-N-acetylneuraminate transmembrane transporter activity // traceable author statement","chr6:88182636-88222057 (+) // 98.35 // q15"]
["11729834_at",39.25849,41.682518,38.985634,42.246773,44.416973,48.58376,-0.09613705,-0.009699345,-0.106199265,0.009699345,0.08196926,0.21133232,0.28403863,0.06111474,-1.1263685,-0.17167892,1.1263685,"down","EIF5A2",56648,"0006412 // translation // inferred from electronic annotation /// 0006414 // translational elongation // inferred from electronic annotation /// 0006452 // translational frameshifting // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0007283 // spermatogenesis // non-traceable author statement /// 0008284 // positive regulation of cell proliferation // inferred from genetic interaction /// 0008612 // peptidyl-lysine modification to hypusine // traceable author statement /// 0008612 // peptidyl-lysine modification to hypusine // inferred from electronic annotation /// 0010509 // polyamine homeostasis // non-traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0043687 // post-translational protein modification // traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0045901 // positive regulation of translational elongation // inferred from electronic annotation /// 0045905 // positive regulation of translational termination // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation","0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0016020 // membrane // inferred from electronic annotation","0003723 // RNA binding // inferred from electronic annotation /// 0003746 // translation elongation factor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0043022 // ribosome binding // inferred from electronic annotation","chr3:170606203-170626477 (-) // 84.51 // q26.2"]
["11724315_a_at",15.219714,15.650199,17.64618,16.847649,16.645851,17.381804,-0.13791347,-0.09767413,0.075500965,0.008692265,-0.008692265,0.05372286,0.6667327,0.35413066,-1.0506411,-0.07126987,1.0506411,"down","LUZP1",7798,"","0005634 // nucleus // inferred from electronic annotation","","chr1:23410028-23495351 (-) // 91.43 // p36.12"]
["11761382_x_at",27.437408,32.29812,23.775047,25.248552,26.90391,25.812538,0.05820036,0.29350615,-0.14849567,-0.06174326,0.02987194,-0.02987194,0.7932791,0.53560257,1.06313,0.08831805,1.06313,"up","SORBS2",8470,"","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /// 0015629 // actin cytoskeleton // traceable author statement /// 0030018 // Z disc // non-traceable author statement /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0005200 // structural constituent of cytoskeleton // traceable author statement /// 0008093 // cytoskeletal adaptor activity // traceable author statement /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0008307 // structural constituent of muscle // traceable author statement","chr4:186547819-186877488 (-) // 99.81 // q35.1"]
["11739567_s_at",458.13354,475.34268,487.38977,395.1971,363.0104,384.46262,0.1065979,0.15979767,0.19590569,-0.1065979,-0.22915936,-0.14632702,0.056566875,0.0020991412,1.2438351,0.31479523,1.2438351,"up","FKBP5",2289,"0000413 // protein peptidyl-prolyl isomerization // not recorded /// 0000413 // protein peptidyl-prolyl isomerization // inferred from electronic annotation /// 0006457 // protein folding // inferred from electronic annotation /// 0006457 // protein folding // traceable author statement /// 0018208 // peptidyl-proline modification // not recorded","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0016020 // membrane // not recorded","0003755 // peptidyl-prolyl cis-trans isomerase activity // not recorded /// 0003755 // peptidyl-prolyl cis-trans isomerase activity // inferred from electronic annotation /// 0005528 // FK506 binding // not recorded /// 0005528 // FK506 binding // traceable author statement /// 0016853 // isomerase activity // inferred from electronic annotation /// 0031072 // heat shock protein binding // inferred from physical interaction","chr6:35541432-35610623 (-) // 87.87 // p21.31"]
["11719928_a_at",307.62033,293.80133,267.04196,278.02963,218.02757,201.3665,0.17499828,0.108688354,-0.029086113,0.029086113,-0.32164192,-0.4363289,0.35944164,0.097786754,1.2551227,0.32782835,1.2551227,"up","KDM5B",10765,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // traceable author statement /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0016568 // chromatin modification // inferred from electronic annotation /// 0034720 // histone H3-K4 demethylation // inferred from direct assay /// 0034720 // histone H3-K4 demethylation // inferred from electronic annotation /// 0034721 // histone H3-K4 demethylation, trimethyl-H3-K4-specific // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // traceable author statement /// 0003714 // transcription corepressor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016702 // oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // inferred from electronic annotation /// 0016706 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // inferred from electronic annotation /// 0032453 // histone demethylase activity (H3-K4 specific) // inferred from electronic annotation /// 0034647 // histone demethylase activity (H3-trimethyl-K4 specific) // inferred from direct assay /// 0034648 // histone demethylase activity (H3-dimethyl-K4 specific) // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation","chr1:202696344-202778598 (-) // 90.96 // q32.1"]
["11747044_s_at",616.1825,643.376,607.55774,576.10535,584.6093,588.1743,0.043725014,0.10602951,0.023388863,-0.053299904,-0.032159805,-0.023388863,0.1767019,0.023569703,1.0673233,0.09399728,1.0673233,"up","LOC653375 /// WBSCR16","653375 /// 81554","","0005739 // mitochondrion // inferred from electronic annotation","","chr7:74765844-74790085 (+) // 97.03 // q11.23 /// chr7:74456328-74480572 (-) // 97.31 // q11.23"]
["11760079_at",8.343287,8.115215,7.128072,8.390952,9.517742,8.231554,0.009725571,-0.03026104,-0.21737862,0.017944336,0.19972897,-0.009725809,0.50684476,0.19648892,-1.1085091,-0.14862056,1.1085091,"down","ABCA1",19,"0002790 // peptide secretion // inferred from electronic annotation /// 0006200 // ATP catabolic process // inferred from electronic annotation /// 0006497 // protein lipidation // inferred from electronic annotation /// 0006629 // lipid metabolic process // traceable author statement /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006820 // anion transport // inferred from sequence or structural similarity /// 0006820 // anion transport // inferred from electronic annotation /// 0006911 // phagocytosis, engulfment // inferred from electronic annotation /// 0007040 // lysosome organization // inferred from direct assay /// 0007186 // G-protein coupled receptor signaling pathway // inferred from mutant phenotype /// 0008202 // steroid metabolic process // inferred from electronic annotation /// 0008203 // cholesterol metabolic process // inferred from direct assay /// 0008203 // cholesterol metabolic process // inferred from electronic annotation /// 0010745 // negative regulation of macrophage derived foam cell differentiation // traceable author statement /// 0010875 // positive regulation of cholesterol efflux // inferred from electronic annotation /// 0010887 // negative regulation of cholesterol storage // traceable author statement /// 0016197 // endosomal transport // inferred from direct assay /// 0030819 // positive regulation of cAMP biosynthetic process // inferred from mutant phenotype /// 0032367 // intracellular cholesterol transport // inferred from mutant phenotype /// 0032488 // Cdc42 protein signal transduction // inferred from mutant phenotype /// 0033344 // cholesterol efflux // inferred from direct assay /// 0033344 // cholesterol efflux // inferred from mutant phenotype /// 0033344 // cholesterol efflux // inferred from electronic annotation /// 0033700 // phospholipid efflux // inferred from direct assay /// 0033700 // phospholipid efflux // inferred from mutant phenotype /// 0033700 // phospholipid efflux // inferred from electronic annotation /// 0034380 // high-density lipoprotein particle assembly // inferred from mutant phenotype /// 0034616 // response to laminar fluid shear stress // inferred from expression pattern /// 0038027 // apolipoprotein A-I-mediated signaling pathway // inferred from direct assay /// 0042157 // lipoprotein metabolic process // traceable author statement /// 0042157 // lipoprotein metabolic process // inferred from electronic annotation /// 0042158 // lipoprotein biosynthetic process // inferred from electronic annotation /// 0042632 // cholesterol homeostasis // inferred from direct assay /// 0043691 // reverse cholesterol transport // inferred from mutant phenotype /// 0043691 // reverse cholesterol transport // inferred from electronic annotation /// 0044255 // cellular lipid metabolic process // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0045332 // phospholipid translocation // inferred from electronic annotation /// 0050702 // interleukin-1 beta secretion // inferred from mutant phenotype /// 0055091 // phospholipid homeostasis // inferred from mutant phenotype /// 0055098 // response to low-density lipoprotein particle stimulus // inferred from expression pattern /// 0060155 // platelet dense granule organization // inferred from mutant phenotype /// 0071222 // cellular response to lipopolysaccharide // inferred from electronic annotation /// 0071300 // cellular response to retinoic acid // inferred from electronic annotation","0005622 // intracellular // inferred from mutant phenotype /// 0005624 // membrane fraction // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from direct assay /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030139 // endocytic vesicle // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// 0045121 // membrane raft // inferred from direct assay /// 0045335 // phagocytic vesicle // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from direct assay /// 0005524 // ATP binding // inferred from electronic annotation /// 0005543 // phospholipid binding // inferred by curator /// 0005548 // phospholipid transporter activity // inferred from direct assay /// 0005548 // phospholipid transporter activity // inferred from electronic annotation /// 0008509 // anion transmembrane transporter activity // inferred from sequence or structural similarity /// 0008509 // anion transmembrane transporter activity // inferred from electronic annotation /// 0015485 // cholesterol binding // inferred by curator /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation /// 0017127 // cholesterol transporter activity // inferred from direct assay /// 0017127 // cholesterol transporter activity // inferred from electronic annotation /// 0019905 // syntaxin binding // inferred from physical interaction /// 0031267 // small GTPase binding // inferred from physical interaction /// 0034185 // apolipoprotein binding // inferred from physical interaction /// 0034186 // apolipoprotein A-I binding // inferred from physical interaction /// 0034188 // apolipoprotein A-I receptor activity // inferred from direct assay","chr9:107606051-107690426 (-) // 81.74 // q31.1"]
["11735036_a_at",24.975353,25.502333,28.010275,25.815088,26.962938,28.980907,-0.07909107,-0.048966885,0.08635998,-0.031381607,0.031381607,0.13550663,0.7375286,0.44870502,-1.0417926,-0.059068136,1.0417926,"down","SORCS1",114815,"0007218 // neuropeptide signaling pathway // non-traceable author statement","0016020 // membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction /// 0008188 // neuropeptide receptor activity // non-traceable author statement","chr10:108333420-108924326 (-) // 94.46 // q25.1"]
["11730971_a_at",139.05623,145.14395,146.72098,139.39882,148.39726,171.38956,-0.06961155,-0.007795334,0.007795334,-0.06606197,0.024184227,0.2319994,0.70005345,0.39694983,-1.0618484,-0.08657781,1.0618484,"down","CYP4F12",66002,"0000038 // very long-chain fatty acid metabolic process // inferred from sequence or structural similarity /// 0001676 // long-chain fatty acid metabolic process // inferred from sequence or structural similarity /// 0003091 // renal water homeostasis // inferred from sequence or structural similarity /// 0003095 // pressure natriuresis // inferred from sequence or structural similarity /// 0006805 // xenobiotic metabolic process // traceable author statement /// 0017144 // drug metabolic process // inferred from sequence or structural similarity /// 0019369 // arachidonic acid metabolic process // inferred from sequence or structural similarity /// 0019373 // epoxygenase P450 pathway // inferred from sequence or structural similarity /// 0030195 // negative regulation of blood coagulation // inferred from sequence or structural similarity /// 0036101 // leukotriene B4 catabolic process // inferred from sequence or structural similarity /// 0042360 // vitamin E metabolic process // inferred from sequence or structural similarity /// 0042371 // vitamin K biosynthetic process // inferred from sequence or structural similarity /// 0044281 // small molecule metabolic process // traceable author statement /// 0055078 // sodium ion homeostasis // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from sequence or structural similarity /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // traceable author statement /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0005792 // microsome // inferred from sequence or structural similarity /// 0005792 // microsome // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from sequence or structural similarity","0004497 // monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred from electronic annotation /// 0008392 // arachidonic acid epoxygenase activity // inferred from sequence or structural similarity /// 0009055 // electron carrier activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen // inferred from electronic annotation /// 0018685 // alkane 1-monooxygenase activity // inferred from sequence or structural similarity /// 0020037 // heme binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047057 // vitamin-K-epoxide reductase (warfarin-sensitive) activity // inferred from sequence or structural similarity /// 0050051 // leukotriene-B4 20-monooxygenase activity // inferred from sequence or structural similarity /// 0070330 // aromatase activity // inferred from electronic annotation","chr19:15783885-15807984 (+) // 98.06 // p13.12"]
["11722025_x_at",279.51657,241.17062,240.00647,297.77988,270.38614,262.8414,0.06832695,-0.14455271,-0.15153408,0.15963936,0.020414352,-0.020414352,0.54348004,0.2264531,-1.0936363,-0.129133,1.0936363,"down","ABCF2",10061,"0006200 // ATP catabolic process // inferred from electronic annotation /// 0006810 // transport // traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005740 // mitochondrial envelope // traceable author statement /// 0043190 // ATP-binding cassette (ABC) transporter complex // traceable author statement","0000166 // nucleotide binding // inferred from electronic annotation /// 0005215 // transporter activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0005524 // ATP binding // traceable author statement /// 0016887 // ATPase activity // inferred from electronic annotation /// 0017111 // nucleoside-triphosphatase activity // inferred from electronic annotation","chr7:150909140-150924666 (-) // 81.12 // q36.1"]
["11732237_a_at",9.650983,12.369897,11.37272,11.130689,10.701394,11.548843,-0.22131228,0.13677359,0.015517235,-0.015517235,-0.07226133,0.037688017,0.98531336,0.95694107,-1.0043836,-0.006310325,1.0043836,"down","GYPA",2993,"0007016 // cytoskeletal anchoring at plasma membrane // inferred from electronic annotation /// 0044419 // interspecies interaction between organisms // inferred from electronic annotation /// 0047484 // regulation of response to osmotic stress // inferred from electronic annotation","0005624 // membrane fraction // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0004872 // receptor activity // inferred from electronic annotation /// 0042802 // identical protein binding // inferred from physical interaction /// 0042803 // protein homodimerization activity // inferred from electronic annotation","chr4:145030456-145061939 (-) // 81.82 // q31.21"]
["11727427_a_at",103.5562,94.792366,97.508896,107.34115,86.05621,90.40428,0.107189655,-0.02038145,0.020381927,0.15897942,-0.15987253,-0.08876085,0.8086019,0.56127614,1.0465307,0.06561466,1.0465307,"up","ACSM3",6296,"0006629 // lipid metabolic process // inferred from electronic annotation /// 0006631 // fatty acid metabolic process // inferred from electronic annotation /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008217 // regulation of blood pressure // non-traceable author statement /// 0008217 // regulation of blood pressure // traceable author statement /// 0042632 // cholesterol homeostasis // non-traceable author statement","0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0015645 // fatty acid ligase activity // inferred from electronic annotation /// 0016874 // ligase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0047760 // butyrate-CoA ligase activity // inferred from electronic annotation","chr16:20775023-20808901 (+) // 99.37 // p12.3"]
["11726440_s_at",79.83464,81.243935,92.20698,83.9565,81.61565,86.22291,-0.052228928,-0.026983738,0.15563202,0.02039814,-0.02039814,0.0588274,0.9778594,0.93669164,1.0040729,0.0058640256,1.0040729,"up","MALT1",10892,"0001923 // B-1 B cell differentiation // inferred from electronic annotation /// 0002237 // response to molecule of bacterial origin // inferred from electronic annotation /// 0002726 // positive regulation of T cell cytokine production // inferred from mutant phenotype /// 0006508 // proteolysis // inferred from direct assay /// 0006508 // proteolysis // inferred from electronic annotation /// 0006916 // anti-apoptosis // non-traceable author statement /// 0006952 // defense response // non-traceable author statement /// 0007250 // activation of NF-kappaB-inducing kinase activity // inferred from mutant phenotype /// 0009620 // response to fungus // inferred from electronic annotation /// 0016567 // protein ubiquitination // inferred from direct assay /// 0031398 // positive regulation of protein ubiquitination // non-traceable author statement /// 0032743 // positive regulation of interleukin-2 production // inferred from mutant phenotype /// 0042098 // T cell proliferation // inferred from electronic annotation /// 0042113 // B cell activation // inferred from electronic annotation /// 0042981 // regulation of apoptotic process // inferred from direct assay /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade // inferred from mutant phenotype /// 0045087 // innate immune response // inferred from electronic annotation /// 0050852 // T cell receptor signaling pathway // inferred from direct assay /// 0050852 // T cell receptor signaling pathway // traceable author statement /// 0050856 // regulation of T cell receptor signaling pathway // inferred from electronic annotation /// 0050870 // positive regulation of T cell activation // inferred by curator /// 0050870 // positive regulation of T cell activation // inferred from electronic annotation /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from mutant phenotype /// 0051092 // positive regulation of NF-kappaB transcription factor activity // inferred from electronic annotation /// 0051168 // nuclear export // inferred from direct assay /// 0051259 // protein oligomerization // inferred from direct assay","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0032449 // CBM complex // non-traceable author statement /// 0043234 // protein complex // inferred from direct assay /// 0048471 // perinuclear region of cytoplasm // inferred from electronic annotation","0002020 // protease binding // inferred from electronic annotation /// 0004197 // cysteine-type endopeptidase activity // non-traceable author statement /// 0004197 // cysteine-type endopeptidase activity // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004871 // signal transducer activity // inferred from mutant phenotype /// 0005515 // protein binding // inferred from physical interaction /// 0008233 // peptidase activity // inferred from direct assay /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0019209 // kinase activator activity // inferred from mutant phenotype /// 0043621 // protein self-association // inferred from physical interaction","chr18:56338617-56417212 (+) // 68.09 // q21.32"]
["11737282_x_at",24.757719,26.625425,26.182661,24.12538,29.305864,24.12538,-0.04036665,0.06455946,0.04036665,-0.07769346,0.20294428,-0.07769346,0.98531336,0.9569984,1.003936,0.005667377,1.003936,"up","ZC3HAV1L",92092,"","","","chr7:138710177-138720775 (-) // 74.86 // q34"]
["11727854_s_at",905.72327,957.5626,1008.04114,902.0743,1131.8861,1023.0568,-0.11735439,-0.037057877,0.037057877,-0.12317848,0.20423222,0.058389664,0.74422234,0.4594004,-1.0611284,-0.08559921,1.0611284,"down","NUP50",10762,"0005975 // carbohydrate metabolic process // traceable author statement /// 0006810 // transport // inferred from electronic annotation /// 0008645 // hexose transport // traceable author statement /// 0010827 // regulation of glucose transport // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0015758 // glucose transport // traceable author statement /// 0016032 // viral reproduction // traceable author statement /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0044281 // small molecule metabolic process // traceable author statement /// 0046907 // intracellular transport // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation /// 0055085 // transmembrane transport // traceable author statement","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005643 // nuclear pore // traceable author statement /// 0005654 // nucleoplasm // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0031965 // nuclear membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction","chr22:45559725-45584055 (+) // 98.43 // q13.31"]
["11759858_at",16.23652,16.728428,15.82007,22.411747,16.37717,15.279168,-0.0062217712,0.036837578,-0.043708324,0.45879078,0.0062217712,-0.093898535,0.76957256,0.49695426,-1.09283,-0.12806891,1.09283,"down","CTAGE5",4253,"0043085 // positive regulation of catalytic activity // traceable author statement","","0008047 // enzyme activator activity // traceable author statement","chr14:39736449-39857948 (+) // 72.17 // q21.1"]
["11747296_a_at",162.77292,138.9231,139.05623,144.11505,147.22287,132.55809,0.20141602,-0.02715826,-0.025776386,0.025776386,0.05655718,-0.09482002,0.81843394,0.5787113,1.0378917,0.053655975,1.0378917,"up","ARMC8",25852,"","","","chr3:137906124-138015096 (+) // 97.89 // q22.3"]
["11715723_s_at",614.2913,650.1098,652.2703,912.22943,921.55664,842.84796,-0.27144814,-0.18968773,-0.18490124,0.29902554,0.31370163,0.18490124,0.034048837,0.000624728,-1.3959254,-0.48122185,1.3959254,"down","ITM2B",9445,"0006915 // apoptotic process // inferred from electronic annotation /// 0006917 // induction of apoptosis // inferred from electronic annotation /// 0007399 // nervous system development // traceable author statement /// 0008219 // cell death // inferred from electronic annotation /// 0042985 // negative regulation of amyloid precursor protein biosynthetic process // inferred from direct assay","0000139 // Golgi membrane // inferred from electronic annotation /// 0005576 // extracellular region // traceable author statement /// 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005768 // endosome // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0010008 // endosome membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030660 // Golgi-associated vesicle membrane // inferred from direct assay /// 0031301 // integral to organelle membrane // inferred from direct assay /// 0043231 // intracellular membrane-bounded organelle // inferred from direct assay","0001540 // beta-amyloid binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic annotation","chr13:48807273-48836451 (+) // 86.85 // q14.2"]
["11721415_at",54.570236,56.64828,54.27965,61.60035,52.275433,60.971947,-0.026958466,0.026958942,-0.034661293,0.14786577,-0.08893967,0.13307285,0.69742495,0.39306355,-1.053765,-0.075553246,1.053765,"down","TMEM62",80021,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr15:43425719-43477344 (+) // 97.52 // q15.2"]
["11743796_a_at",362.56342,315.32492,326.73093,301.55646,269.7611,228.72119,0.23359966,0.03220558,0.08346939,-0.03220558,-0.1929512,-0.43104362,0.2873118,0.0623076,1.2615159,0.33515835,1.2615159,"up","APITD1 /// APITD1-CORT","100526739 /// 378708","0000087 // M phase of mitotic cell cycle // traceable author statement /// 0000236 // mitotic prometaphase // traceable author statement /// 0000278 // mitotic cell cycle // traceable author statement /// 0000712 // resolution of meiotic recombination intermediates // inferred from mutant phenotype /// 0006281 // DNA repair // inferred from direct assay /// 0006281 // DNA repair // inferred from electronic annotation /// 0006352 // transcription initiation, DNA-dependent // inferred from electronic annotation /// 0006974 // response to DNA damage stimulus // inferred from direct assay /// 0006974 // response to DNA damage stimulus // inferred from mutant phenotype /// 0006974 // response to DNA damage stimulus // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from electronic annotation /// 0031297 // replication fork processing // inferred from mutant phenotype /// 0031398 // positive regulation of protein ubiquitination // traceable author statement /// 0051301 // cell division // inferred from electronic annotation","0000775 // chromosome, centromeric region // inferred from electronic annotation /// 0000776 // kinetochore // inferred from electronic annotation /// 0000777 // condensed chromosome kinetochore // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005694 // chromosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0043240 // Fanconi anaemia nuclear complex // inferred from direct assay /// 0071821 // FANCM-MHF complex // inferred from direct assay","0003677 // DNA binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003682 // chromatin binding // inferred from direct assay /// 0003690 // double-stranded DNA binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction","chr1:10490158-10512210 (+) // 94.29 // p36.22"]
["11748408_a_at",124.894264,105.43786,106.71678,107.72859,85.1903,85.84423,0.23561764,-0.008697033,0.00869751,0.022311687,-0.31632853,-0.3052969,0.38255453,0.11040216,1.2127739,0.27831063,1.2127739,"up","C1orf9",51430,"0001503 // ossification // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030867 // rough endoplasmic reticulum membrane // inferred from electronic annotation","","chr1:172502145-172572423 (+) // 96.15 // q24.3"]
["11749566_s_at",211.27805,199.07799,192.35245,192.38945,183.56339,202.26846,0.110461235,0.024652481,-0.024929523,-0.024652481,-0.092402935,0.047590256,0.6637552,0.34932506,1.0423813,0.059883088,1.0423813,"up","LCMT2",9836,"0008033 // tRNA processing // inferred from electronic annotation /// 0032259 // methylation // inferred from electronic annotation","","0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation","chr15:43620438-43622780 (-) // 98.56 // q15.3"]
["11731251_at",38.77414,44.85423,42.368763,46.59066,45.41156,50.531883,-0.21905708,-0.008907795,-0.09115076,0.0458889,0.008907795,0.16304207,0.3255162,0.080174714,-1.132087,-0.17898482,1.132087,"down","EPHA8",2046,"0006468 // protein phosphorylation // inferred from electronic annotation /// 0006929 // substrate-dependent cell migration // inferred from sequence or structural similarity /// 0006929 // substrate-dependent cell migration // inferred from electronic annotation /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred from electronic annotation /// 0007399 // nervous system development // inferred from electronic annotation /// 0007411 // axon guidance // inferred from sequence or structural similarity /// 0007411 // axon guidance // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0016322 // neuron remodeling // inferred from sequence or structural similarity /// 0016322 // neuron remodeling // inferred from electronic annotation /// 0030155 // regulation of cell adhesion // inferred from sequence or structural similarity /// 0030155 // regulation of cell adhesion // inferred from electronic annotation /// 0031175 // neuron projection development // inferred from sequence or structural similarity /// 0031175 // neuron projection development // inferred from electronic annotation /// 0033628 // regulation of cell adhesion mediated by integrin // inferred from sequence or structural similarity /// 0033628 // regulation of cell adhesion mediated by integrin // inferred from electronic annotation /// 0043410 // positive regulation of MAPK cascade // inferred from sequence or structural similarity /// 0043410 // positive regulation of MAPK cascade // inferred from electronic annotation /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from sequence or structural similarity /// 0043552 // positive regulation of phosphatidylinositol 3-kinase activity // inferred from electronic annotation /// 0046777 // protein autophosphorylation // inferred from sequence or structural similarity /// 0046777 // protein autophosphorylation // inferred from electronic annotation /// 0048013 // ephrin receptor signaling pathway // inferred from sequence or structural similarity /// 0048013 // ephrin receptor signaling pathway // inferred from electronic annotation","0005768 // endosome // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred from sequence or structural similarity /// 0005887 // integral to plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0031901 // early endosome membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0043005 // neuron projection // inferred from sequence or structural similarity /// 0043005 // neuron projection // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004714 // transmembrane receptor protein tyrosine kinase activity // inferred from electronic annotation /// 0004872 // receptor activity // inferred from electronic annotation /// 0005003 // ephrin receptor activity // inferred from electronic annotation /// 0005004 // GPI-linked ephrin receptor activity // inferred from sequence or structural similarity /// 0005004 // GPI-linked ephrin receptor activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation","chr1:22889994-22916114 (+) // 83.62 // p36.12"]
["11742443_a_at",8.031886,8.15041,7.356694,7.936831,6.297905,7.6638427,0.04242325,0.06355715,-0.08425784,0.025247574,-0.30844355,-0.025247574,0.6930594,0.38764927,1.0792696,0.11005536,1.0792696,"up","PRDM13",59336,"0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0022008 // neurogenesis // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr6:100054649-100063454 (+) // 95.63 // q16.2"]
["11763254_at",37.551216,35.001167,37.551216,33.17685,38.173798,39.27753,0,-0.10145664,0,-0.1786828,0.023723125,0.06484461,0.9885051,0.9656521,-1.0026239,-0.0037805524,1.0026239,"down","CYAT1 /// IGLC1 /// IGLV1-44","100290481 /// 28823 /// 3537","0006955 // immune response // non-traceable author statement /// 0006956 // complement activation // traceable author statement /// 0006958 // complement activation, classical pathway // traceable author statement /// 0045087 // innate immune response // traceable author statement /// 0050776 // regulation of immune response // traceable author statement","0005576 // extracellular region // traceable author statement /// 0005886 // plasma membrane // traceable author statement","0003823 // antigen binding // non-traceable author statement /// 0003823 // antigen binding // inferred from electronic annotation","chr22:22764097-23248558 (+) // 98.34 // q11.22"]
["11733677_at",16.654943,17.09253,18.42734,16.694183,17.582605,18.234982,-0.05780697,-0.020391464,0.08809042,-0.054411888,0.020391464,0.07295132,0.95538265,0.87398183,-1.006732,-0.009679659,1.006732,"down","C4orf50",389197,"","","","chr4:5958838-5990166 (-) // 78.68 // p16.2"]
["11756078_a_at",33.664505,28.264925,30.846743,31.177345,25.870575,32.090622,0.118420124,-0.13379526,-0.007689953,0.007689953,-0.26149607,0.049343586,0.8546636,0.6451499,1.0428025,0.06046588,1.0428025,"up","ARHGEF37",389337,"0035023 // regulation of Rho protein signal transduction // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation /// 0005089 // Rho guanyl-nucleotide exchange factor activity // inferred from electronic annotation","chr5:149010633-149014527 (+) // 68.02 // q32"]
["11764007_at",131.66212,104.74272,115.94888,132.9772,119.21629,118.33301,0.14862347,-0.1813674,-0.03472805,0.16296196,0.005364418,-0.005364418,0.78584635,0.5230136,-1.0546844,-0.07681136,1.0546844,"down","CDKL3",51265,"0006464 // cellular protein modification process // traceable author statement /// 0006468 // protein phosphorylation // traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // traceable author statement /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004693 // cyclin-dependent protein kinase activity // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation","chr5:133702266-133702844 (-) // 96.82 // q31.1"]
["11742015_at",11.814162,10.086543,10.313378,10.211357,9.681387,11.190012,0.20317173,-0.024914265,0.007171154,-0.007171154,-0.08405995,0.12486577,0.840059,0.6183184,1.0356941,0.050597984,1.0356941,"up","C11orf34",349633,"","0009897 // external side of plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr11:112118875-112131583 (-) // 99.94 // q23.1"]
["11738505_at",8.661694,8.195579,8.599999,7.6549807,9.466654,9.212204,0.0051562786,-0.07464695,-0.00515604,-0.17309403,0.13336182,0.09405351,0.87585187,0.6879147,-1.0302464,-0.042989388,1.0302464,"down","KRTAP13-1",140258,"","0005882 // intermediate filament // inferred from electronic annotation","","chr21:31768294-31769136 (+) // 97.91 // q22.11"]
["11749374_a_at",846.3844,771.2073,705.515,790.47833,577.5372,762.25964,0.14261246,0.008418083,-0.12002373,0.04402542,-0.40878677,-0.008418083,0.73958355,0.45200133,1.0978863,0.13472869,1.0978863,"up","MSN",4478,"0006928 // cellular component movement // traceable author statement /// 0007159 // leukocyte cell-cell adhesion // inferred from expression pattern /// 0022614 // membrane to membrane docking // inferred from expression pattern /// 0050900 // leukocyte migration // inferred from expression pattern /// 2000401 // regulation of lymphocyte migration // inferred from mutant phenotype","0001931 // uropod // inferred from electronic annotation /// 0005625 // soluble fraction // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // traceable author statement /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005886 // plasma membrane // traceable author statement /// 0005902 // microvillus // inferred from direct assay /// 0005925 // focal adhesion // inferred from direct assay /// 0009898 // internal side of plasma membrane // inferred from electronic annotation /// 0009986 // cell surface // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016323 // basolateral plasma membrane // inferred from electronic annotation /// 0016324 // apical plasma membrane // inferred from electronic annotation /// 0019898 // extrinsic to membrane // inferred from electronic annotation /// 0030175 // filopodium // inferred from direct assay /// 0030667 // secretory granule membrane // inferred from electronic annotation /// 0031527 // filopodium membrane // inferred from electronic annotation /// 0031528 // microvillus membrane // inferred from electronic annotation /// 0042995 // cell projection // inferred from electronic annotation /// 0045177 // apical part of cell // inferred from direct assay /// 0045177 // apical part of cell // inferred from electronic annotation","0003779 // actin binding // inferred from electronic annotation /// 0005102 // receptor binding // inferred from physical interaction /// 0005200 // structural constituent of cytoskeleton // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008092 // cytoskeletal protein binding // inferred from electronic annotation /// 0019901 // protein kinase binding // inferred from physical interaction /// 0050839 // cell adhesion molecule binding // inferred from physical interaction","chr5:25910370-25911588 (+) // 92.19 // p14.1 /// chrX:64953101-64960009 (+) // 95.27 // q12"]
["11723766_at",363.01785,316.19406,318.88968,334.72318,336.04916,320.33374,0.14876842,-0.05046177,-0.038214684,0.03169632,0.037400246,-0.03169632,0.97063214,0.9169865,1.0052567,0.007563884,1.0052567,"up","GFER",2671,"0006626 // protein targeting to mitochondrion // traceable author statement /// 0007283 // spermatogenesis // non-traceable author statement /// 0008283 // cell proliferation // non-traceable author statement /// 0044267 // cellular protein metabolic process // traceable author statement /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005576 // extracellular region // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0008083 // growth factor activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016972 // thiol oxidase activity // inferred from electronic annotation","chr16:2033676-2037750 (+) // 84.07 // p13.3"]
["11743102_at",610.2945,623.56213,588.2552,579.1118,601.2416,608.67163,0.012701035,0.04372883,-0.040362358,-0.06296253,-0.008859634,0.008859634,0.7481954,0.46565488,1.0184275,0.026343267,1.0184275,"up","PTCD3",55037,"","0005739 // mitochondrion // inferred from electronic annotation","","chr2:86333345-86369280 (+) // 86.86 // p11.2"]
["11748232_a_at",270.40778,257.00107,289.2284,330.27527,310.82315,257.54767,-0.0485363,-0.12189865,0.0485363,0.23999596,0.152421,-0.11883354,0.64599776,0.32920936,-1.0956806,-0.1318273,1.0956806,"down","DIS3",22894,"0000288 // nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay // traceable author statement /// 0006364 // rRNA processing // traceable author statement /// 0006364 // rRNA processing // inferred from electronic annotation /// 0010467 // gene expression // traceable author statement /// 0016070 // RNA metabolic process // traceable author statement /// 0016071 // mRNA metabolic process // traceable author statement /// 0016075 // rRNA catabolic process // inferred from mutant phenotype /// 0043928 // exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay // traceable author statement /// 0071034 // CUT catabolic process // inferred from mutant phenotype /// 0090305 // nucleic acid phosphodiester bond hydrolysis // inferred from electronic annotation","0000176 // nuclear exosome (RNase complex) // inferred from direct assay /// 0000178 // exosome (RNase complex) // traceable author statement /// 0000178 // exosome (RNase complex) // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0005654 // nucleoplasm // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement","0000175 // 3'-5'-exoribonuclease activity // inferred from mutant phenotype /// 0003723 // RNA binding // inferred from electronic annotation /// 0004518 // nuclease activity // inferred from electronic annotation /// 0004519 // endonuclease activity // inferred from mutant phenotype /// 0004519 // endonuclease activity // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred from electronic annotation /// 0004540 // ribonuclease activity // inferred from electronic annotation /// 0005085 // guanyl-nucleotide exchange factor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from electronic annotation","chr13:73333181-73356254 (-) // 98.38 // q22.1"]
["11739946_a_at",54.748077,53.784153,53.35074,43.53842,57.05657,56.130676,0.012813568,-0.012813568,-0.024486542,-0.31770563,0.072398186,0.04879427,0.86934596,0.6744612,1.040547,0.05734215,1.040547,"up","PKP1",5317,"0006915 // apoptotic process // traceable author statement /// 0006921 // cellular component disassembly involved in apoptotic process // traceable author statement /// 0007155 // cell adhesion // non-traceable author statement /// 0007155 // cell adhesion // inferred from electronic annotation /// 0007165 // signal transduction // non-traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007275 // multicellular organismal development // inferred from electronic annotation","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from direct assay /// 0005882 // intermediate filament // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0030054 // cell junction // inferred from electronic annotation /// 0030057 // desmosome // non-traceable author statement /// 0030057 // desmosome // inferred from electronic annotation","0004871 // signal transducer activity // traceable author statement /// 0019215 // intermediate filament binding // non-traceable author statement /// 0030280 // structural constituent of epidermis // non-traceable author statement","chr1:201252579-201302115 (+) // 96.23 // q32.1"]
["11744521_x_at",603.22296,593.6507,555.7223,627.8596,649.5643,630.94714,-0.028875351,-0.051952362,-0.14720249,0.028875351,0.077905655,0.035952568,0.21367058,0.034726672,-1.089441,-0.12358799,1.089441,"down","USP39",10713,"0000245 // spliceosomal complex assembly // traceable author statement /// 0006397 // mRNA processing // traceable author statement /// 0006397 // mRNA processing // inferred from electronic annotation /// 0006511 // ubiquitin-dependent protein catabolic process // inferred from electronic annotation /// 0008380 // RNA splicing // traceable author statement /// 0008380 // RNA splicing // inferred from electronic annotation","0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annotation","0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr2:85843300-85876403 (+) // 97.03 // p11.2"]
["11763080_at",11.948659,10.1732235,12.374153,10.61636,11.584586,10.547084,0.10760069,-0.12447095,0.15808201,-0.06295848,0.06295848,-0.07240343,0.7748992,0.50496626,1.0505939,0.07120505,1.0505939,"up","","","0006955 // immune response // traceable author statement /// 0009887 // organ morphogenesis // traceable author statement","","","chr8:30274917-30275420 (+) // 68.29 // p12"]
["11723988_a_at",106.4759,110.703674,111.88948,106.23813,110.65312,119.21704,-0.05584669,0.00032949448,0.015700817,-0.05907154,-0.00032949448,0.107216835,0.83684355,0.61295676,-1.0204537,-0.029210713,1.0204537,"down","NR2F2",7026,"0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from direct assay /// 0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0001764 // neuron migration // inferred from electronic annotation /// 0001937 // negative regulation of endothelial cell proliferation // inferred from mutant phenotype /// 0001945 // lymph vessel development // inferred from electronic annotation /// 0006351 // transcription, DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription, DNA-dependent // inferred by curator /// 0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II promoter // traceable author statement /// 0006357 // regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// 0006629 // lipid metabolic process // traceable author statement /// 0007165 // signal transduction // traceable author statement /// 0007519 // skeletal muscle tissue development // inferred from electronic annotation /// 0009952 // anterior/posterior pattern specification // inferred from electronic annotation /// 0009956 // radial pattern formation // inferred from electronic annotation /// 0010596 // negative regulation of endothelial cell migration // inferred from mutant phenotype /// 0030522 // intracellular receptor mediated signaling pathway // inferred from direct assay /// 0030522 // intracellular receptor mediated signaling pathway // traceable author statement /// 0030522 // intracellular receptor mediated signaling pathway // inferred from electronic annotation /// 0030900 // forebrain development // inferred from electronic annotation /// 0032355 // response to estradiol stimulus // inferred from electronic annotation /// 0043401 // steroid hormone mediated signaling pathway // inferred from electronic annotation /// 0045736 // negative regulation of cyclin-dependent protein kinase activity // inferred from direct assay /// 0045892 // negative regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from direct assay /// 0045893 // positive regulation of transcription, DNA-dependent // inferred from mutant phenotype /// 0048514 // blood vessel morphogenesis // inferred from electronic annotation /// 0060173 // limb development // inferred from electronic annotation /// 0060849 // regulation of transcription involved in lymphatic endothelial cell fate commitment // inferred from mutant phenotype","0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation","0001972 // retinoic acid binding // inferred from direct assay /// 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred by curator /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from direct assay /// 0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// 0003707 // steroid hormone receptor activity // inferred from electronic annotation /// 0003714 // transcription corepressor activity // traceable author statement /// 0004872 // receptor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from direct assay /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0004879 // ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity // traceable author statement /// 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0042803 // protein homodimerization activity // inferred from physical interaction /// 0043565 // sequence-specific DNA binding // inferred from direct assay /// 0043565 // sequence-specific DNA binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation","chr15:96873745-96883489 (+) // 89.47 // q26.2"]
["11740083_x_at",6.4332037,6.8941865,6.9391723,6.8553,6.0351725,6.6086483,-0.06525016,0.034592867,0.04397607,0.026432276,-0.1573925,-0.026432276,0.7237423,0.429844,1.0402309,0.056903757,1.0402309,"up","AGMO",392636,"0006633 // fatty acid biosynthetic process // inferred from electronic annotation /// 0006643 // membrane lipid metabolic process // inferred from direct assay /// 0046485 // ether lipid metabolic process // inferred from direct assay /// 0055114 // oxidation-reduction process // inferred from electronic annotation","0005783 // endoplasmic reticulum // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","0005506 // iron ion binding // inferred from mutant phenotype /// 0005506 // iron ion binding // inferred from electronic annotation /// 0016491 // oxidoreductase activity // inferred from electronic annotation /// 0050479 // glyceryl-ether monooxygenase activity // inferred from direct assay /// 0050479 // glyceryl-ether monooxygenase activity // inferred from electronic annotation","chr7:15239942-15601640 (-) // 87.84 // p21.2"]
["11747955_a_at",132.08505,147.51619,137.0952,140.25885,158.45827,176.5723,-0.12301493,0.03639078,-0.069304466,-0.03639078,0.1396203,0.29577637,0.4560935,0.15819664,-1.1367998,-0.18497822,1.1367998,"down","PDZD3",79849,"0006811 // ion transport // non-traceable author statement /// 0006833 // water transport // non-traceable author statement /// 0007168 // receptor guanylyl cyclase signaling pathway // inferred by curator /// 0009636 // response to toxin // traceable author statement /// 0019934 // cGMP-mediated signaling // non-traceable author statement /// 0030827 // negative regulation of cGMP biosynthetic process // traceable author statement /// 0031283 // negative regulation of guanylate cyclase activity // inferred from direct assay","0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005886 // plasma membrane // inferred from electronic annotation /// 0005903 // brush border // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0035003 // subapical complex // inferred from direct assay /// 0045177 // apical part of cell // inferred from direct assay","0005515 // protein binding // inferred from physical interaction /// 0008022 // protein C-terminus binding // inferred from physical interaction /// 0008200 // ion channel inhibitor activity // traceable author statement /// 0030251 // guanylate cyclase inhibitor activity // inferred from direct assay","chr11:119056182-119060201 (+) // 100.0 // q23.3"]
["11717426_a_at",534.17145,538.4395,508.70737,652.71326,593.7861,602.13055,-0.082060814,-0.07057953,-0.15252781,0.20708561,0.07057953,0.09071255,0.119664736,0.010651782,-1.1683847,-0.22451533,1.1683847,"down","CHMP3 /// RNF103-CHMP3","100526767 /// 51652","0000910 // cytokinesis // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006915 // apoptotic process // inferred from electronic annotation /// 0007049 // cell cycle // inferred from electronic annotation /// 0008333 // endosome to lysosome transport // inferred from electronic annotation /// 0015031 // protein transport // inferred from electronic annotation /// 0016044 // cellular membrane organization // traceable author statement /// 0016197 // endosomal transport // traceable author statement /// 0051036 // regulation of endosome size // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005737 // cytoplasm // inferred from electronic annotation /// 0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation /// 0005770 // late endosome // inferred from electronic annotation /// 0005829 // cytosol // traceable author statement /// 0005829 // cytosol // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030496 // midbody // inferred from electronic annotation /// 0031902 // late endosome membrane // inferred from electronic annotation","0005515 // protein binding // inferred from physical interaction /// 0005546 // phosphatidylinositol-4,5-bisphosphate binding // inferred from electronic annotation","chr2:86731061-86790620 (-) // 61.91 // p11.2"]
["11753134_a_at",27.60934,29.57894,31.385792,23.389816,28.439674,27.923145,-0.02952671,0.06988716,0.15542841,-0.26880264,0.013221741,-0.013221741,0.5276501,0.21286535,1.1133165,0.15486383,1.1133165,"up","SGK2",10110,"0001558 // regulation of cell growth // traceable author statement /// 0006468 // protein phosphorylation // non-traceable author statement /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0006468 // protein phosphorylation // traceable author statement /// 0006979 // response to oxidative stress // traceable author statement /// 0007243 // intracellular protein kinase cascade // traceable author statement /// 0016310 // phosphorylation // inferred from electronic annotation /// 0032411 // positive regulation of transporter activity // traceable author statement /// 0042127 // regulation of cell proliferation // traceable author statement","0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0015459 // potassium channel regulator activity // inferred from direct assay /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0017080 // sodium channel regulator activity // non-traceable author statement /// 0017080 // sodium channel regulator activity // traceable author statement","chr20:42194955-42213656 (+) // 99.83 // q13.12"]
["11761878_at",14.682837,23.305641,20.947044,17.651861,19.831657,17.76244,-0.354187,0.31236172,0.15842915,-0.08849716,0.0794878,-0.0794878,0.9094268,0.7597018,1.0485291,0.06836697,1.0485291,"up","PARD3B",117583,"0007049 // cell cycle // inferred from electronic annotation /// 0051301 // cell division // inferred from electronic annotation","0005923 // tight junction // inferred from electronic annotation /// 0012505 // endomembrane system // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic annotation","","chr2:205410515-205913318 (+) // 84.98 // q33.3"]
["11748292_a_at",355.3965,344.79065,323.783,330.4327,327.2354,337.3617,0.09010315,0.04639435,-0.044299126,-0.014969826,-0.028997421,0.014969826,0.6924063,0.38700178,1.0283979,0.040398594,1.0283979,"up","GBA /// GBAP1","2629 /// 2630","0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006629 // lipid metabolic process // inferred from electronic annotation /// 0006665 // sphingolipid metabolic process // traceable author statement /// 0006665 // sphingolipid metabolic process // inferred from electronic annotation /// 0006680 // glucosylceramide catabolic process // inferred from mutant phenotype /// 0006687 // glycosphingolipid metabolic process // traceable author statement /// 0007040 // lysosome organization // inferred from electronic annotation /// 0008152 // metabolic process // inferred from electronic annotation /// 0008219 // cell death // inferred from electronic annotation /// 0023021 // termination of signal transduction // inferred from mutant phenotype /// 0032715 // negative regulation of interleukin-6 production // inferred from direct assay /// 0035307 // positive regulation of protein dephosphorylation // inferred from mutant phenotype /// 0043407 // negative regulation of MAP kinase activity // inferred from mutant phenotype /// 0044281 // small molecule metabolic process // traceable author statement /// 0046512 // sphingosine biosynthetic process // inferred from mutant phenotype /// 0046513 // ceramide biosynthetic process // inferred from mutant phenotype /// 0050728 // negative regulation of inflammatory response // inferred by curator /// 0071356 // cellular response to tumor necrosis factor // inferred from mutant phenotype","0005764 // lysosome // inferred from electronic annotation /// 0005765 // lysosomal membrane // inferred from sequence or structural similarity /// 0005765 // lysosomal membrane // traceable author statement /// 0005765 // lysosomal membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0043202 // lysosomal lumen // inferred from sequence or structural similarity /// 0043202 // lysosomal lumen // inferred from electronic annotation","0003824 // catalytic activity // inferred from electronic annotation /// 0004348 // glucosylceramidase activity // inferred from direct assay /// 0004348 // glucosylceramidase activity // inferred from electronic annotation /// 0005102 // receptor binding // inferred from sequence or structural similarity /// 0005102 // receptor binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0043169 // cation binding // inferred from electronic annotation","chr1:155184064-155188796 (-) // 99.61 // q22"]
["11743339_s_at",263.0001,237.47049,257.80164,245.61652,227.77043,214.55617,0.12298584,-0.024329662,0.09418392,0.02433014,-0.08449745,-0.17072201,0.40213755,0.122175895,1.102855,0.14124307,1.102855,"up","MFSD11",79157,"","0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation","","chr17:74733582-74775336 (+) // 82.75 // q25.1"]
["11742916_x_at",18.286415,22.305191,20.533377,21.99547,22.995827,24.483002,-0.27652073,0.010086536,-0.10932207,-0.010086536,0.054079056,0.14448738,0.39381745,0.1172483,-1.1392455,-0.18807869,1.1392455,"down","LMTK2",22853,"0001881 // receptor recycling // inferred from mutant phenotype /// 0006468 // protein phosphorylation // inferred from direct assay /// 0006468 // protein phosphorylation // inferred from electronic annotation /// 0016310 // phosphorylation // inferred from electronic annotation /// 0018105 // peptidyl-serine phosphorylation // inferred from direct assay /// 0018107 // peptidyl-threonine phosphorylation // inferred from direct assay /// 0032456 // endocytic recycling // inferred from mutant phenotype /// 0033572 // transferrin transport // inferred from mutant phenotype /// 0045022 // early endosome to late endosome transport // inferred from mutant phenotype /// 0046777 // protein autophosphorylation // inferred from direct assay","0005769 // early endosome // inferred from direct assay /// 0005794 // Golgi apparatus // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from direct assay /// 0016021 // integral to membrane // inferred from electronic annotation /// 0048471 // perinuclear region of cytoplasm // inferred from direct assay /// 0055037 // recycling endosome // inferred from direct assay","0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred from electronic annotation /// 0004674 // protein serine/threonine kinase activity // inferred from direct assay /// 0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// 0004713 // protein tyrosine kinase activity // inferred from electronic annotation /// 0004864 // protein phosphatase inhibitor activity // inferred from direct assay /// 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // non-traceable author statement /// 0005524 // ATP binding // inferred from electronic annotation /// 0016301 // kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016772 // transferase activity, transferring phosphorus-containing groups // inferred from electronic annotation /// 0070853 // myosin VI binding // inferred from physical interaction","chr7:97736168-97835878 (+) // 99.02 // q21.3"]
["11756226_a_at",472.48157,437.27356,425.69714,520.0563,467.54962,458.3653,0.029449463,-0.08227253,-0.12098122,0.16785908,0.014310837,-0.014310837,0.4996575,0.19051777,-1.0821404,-0.11388775,1.0821404,"down","GRIPAP1",56850,"","0005768 // endosome // inferred from electronic annotation /// 0005769 // early endosome // inferred from electronic annotation","","chrX:48830135-48845036 (-) // 87.54 // p11.23"]
["11760143_at",57.272087,62.461475,57.2235,51.08111,60.228024,58.55664,-0.01600027,0.1091342,-0.017224789,-0.18104267,0.056602478,0.01600027,0.77655584,0.50745356,1.0435138,0.061449643,1.0435138,"up","HLA-F",3134,"0002474 // antigen processing and presentation of peptide antigen via MHC class I // traceable author statement /// 0002474 // antigen processing and presentation of peptide antigen via MHC class I // inferred from electronic annotation /// 0002479 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent // traceable author statement /// 0002480 // antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent // traceable author statement /// 0006955 // immune response // inferred from electronic annotation /// 0019221 // cytokine-mediated signaling pathway // traceable author statement /// 0019882 // antigen processing and presentation // inferred from electronic annotation /// 0042590 // antigen processing and presentation of exogenous peptide antigen via MHC class I // traceable author statement /// 0050776 // regulation of immune response // traceable author statement /// 0060333 // interferon-gamma-mediated signaling pathway // traceable author statement /// 0060337 // type I interferon-mediated signaling pathway // traceable author statement","0000139 // Golgi membrane // traceable author statement /// 0005886 // plasma membrane // traceable author statement /// 0012507 // ER to Golgi transport vesicle membrane // traceable author statement /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electronic annotation /// 0030670 // phagocytic vesicle membrane // traceable author statement /// 0031901 // early endosome membrane // traceable author statement /// 0042612 // MHC class I protein complex // inferred from electronic annotation /// 0071556 // integral to lumenal side of endoplasmic reticulum membrane // traceable author statement","0032393 // MHC class I receptor activity // traceable author statement","chr6:29691170-29694301 (+) // 97.41 // p22.1"]

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["原始数据文件提供多个表单如下：\n\n表单 Slide lists：提供了数据文件名称，样本标签，芯片条码，芯片标签等信息。\n表单 Normalized_Data：提供了所有样本的标准化数据，以及每个探针的表达差异信息，以及每个探针的注释信息等。\n表单 Diff Genes Number：提供了差异基因列表中上下调差异统计情况。\n表单 Differential Data：提供了所有差异基因的标准化数据，差异信息以及注释信息。\n表单 Diff Data(UP)：提供了上调差异基因的标准化数据，差异信息以及注释信息。\n表单 Diff Data(Down)：提供了下调差异基因的标准化数据，差异信息以及注释信息。\n表单 Raw_Data：提供了原始所有探针未经标准化的原始表达值。\n\n该文件提供了芯片中所有探针（probe）的原始信号值（raw）、标准化后信号值（normalized）、T-test的P值（p-value & Corrected p-value）、 FC值（Fold change、Log FC & Absolute FC）、注释后的基因名（Gene symbol & Entrez Gene）、GO注释信息（bp、cc & mf）与基因组位置信息（alignment）。"]

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